 |
| Job Description | P09323 | | Confidence | 92.04% | Date | Thu Jan 5 11:02:10 GMT 2012 |
| Rank | 44 | Aligned Residues | 36 |
| % Identity | 17% | Template | c3fppB_ |
| PDB info |
PDB header:membrane protein | Chain: B: PDB Molecule:macrolide-specific efflux protein maca; |
PDBTitle: crystal structure of e.coli maca
|
| Resolution | 2.99 Å |
|
|   |   |
574 | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | V | A | L | E | G | K | G | F | K | R | L | V | E | E | G | A | Q | V | S | A | G | Q | P | I | L | E | M | D | L | D | Y | L | N | A | N |
| Query Conservation |   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |
| Template Sequence |   |
G | A | Q | V | S | G | Q | L | K | T | L | S | V | A | I | G | D | K | V | K | K | D | Q | L | L | G | V | I | D | P | E | Q | A | E | N | Q |
| Template Known Secondary structure |   |
|
| S | S |
|  |  |
|
|  |  |
|
|
| T | T |
| B |
|
| T | T |
|  |  |  |  |
|
|
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|