56 c1nekB_ Probab=97.57   E-value=3.6e-06  Score=52.53  Aligned_columns=94  Identities=16%

Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCHHCEEEECCCCCCCCCCCE
Q ss_conf             7778986666767722899987837676347899888-708765444432211242115800001220144677776533
Q batch____        15 NSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSE-WNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEW   93 (294)
Q Consensus        15 ~~~~p~~~~~~~~~~~~~liD~skCiGC~aC~~AC~~-~n~lp~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~   93 (294)
                      ....|.......++++..+-|+++||.|++|+.+|+. +..-.....+............+..-......+.-......|
T Consensus       125 ~~~~~~~e~~~~pe~~~~~~~~~~CI~Cg~C~~~CP~~~~~~~~~~Gp~~~~~a~~~~~d~~d~~~~~r~~~~~~~~g~~  204 (238)
T c1nekB_         125 GQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVF  204 (238)
T ss_dssp             CCSCCSSSCCCCHHHHHTTTTTSCCCCCCHHHHTCHHHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSSSTTT
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
T ss_conf             66665444347888999988799676203644437523203874338799999999872245441056788753002211


Q ss_pred             EEECHHHCCCCCCHHHHHCCCC
Q ss_conf             5511040068884445408854
Q batch____        94 LIRKDGCMHCEDPGCLKACPSA  115 (294)
Q Consensus        94 ~~~~~~C~hC~~p~C~~aCP~~  115 (294)
                      .     |.+|+.  |..+||.+
T Consensus       205 ~-----C~~Cg~--C~~vCP~g  219 (238)
T c1nekB_         205 R-----CHSIMN--CVSVCPKG  219 (238)
T ss_dssp             T-----CCCCCH--HHHHCTTC
T ss_pred             C-----CCCCCC--CHHCCCCC
T ss_conf             0-----103797--01107998