BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (352 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q482U6 Electron transport complex protein rnfD n=103 Ta... 390 e-107 UniRef50_Q15RL2 Electron transport complex protein rnfD n=81 Tax... 377 e-103 UniRef50_Q4QJQ5 Electron transport complex protein rnfD n=74 Tax... 341 2e-92 UniRef50_D0L1N4 Electron transport complex, RnfABCDGE type, D su... 316 9e-85 UniRef50_B3PB33 Electron transport complex protein rnfD n=91 Tax... 312 1e-83 UniRef50_Q31GU5 NADH oxidoreductase, RnfABCDGE type, D subunit n... 307 4e-82 UniRef50_Q89AW7 Electron transport complex protein rnfD n=1 Tax=... 307 5e-82 UniRef50_B8D8R7 Electron transport complex protein rnfD n=4 Tax=... 304 4e-81 UniRef50_B9ZJX0 Electron transport complex, RnfABCDGE type, D su... 288 3e-76 UniRef50_A5CXQ4 Electron transport complex protein RnfD n=2 Tax=... 279 1e-73 UniRef50_Q3SHB5 Electron transport complex, RnfABCDGE type, D su... 253 5e-66 UniRef50_B6BWH4 Na-translocating NADH-quinone reductase, Nqr2 su... 244 2e-63 UniRef50_C4L9H7 Electron transport complex, RnfABCDGE type, D su... 241 3e-62 UniRef50_A0L5G5 Electron transport complex, RnfABCDGE type, D su... 237 4e-61 UniRef50_A1WTR8 Electron transport complex protein rnfD n=2 Tax=... 229 1e-58 UniRef50_Q3A7W9 NADH:ubiquinone oxidoreductase, RnfD subunit-lik... 227 5e-58 UniRef50_Q0AAH0 Electron transport complex, RnfABCDGE type, D su... 225 2e-57 UniRef50_Q9EVN4 Electron transport complex protein rnfD n=20 Tax... 222 1e-56 UniRef50_Q4K755 Electron transport complex, RnfABCDGE type, D su... 214 3e-54 UniRef50_Q5P536 Electron transport complex protein rnfD (Nitroge... 214 4e-54 UniRef50_C1SKX3 Electron transport complex, RnfABCDGE type, D su... 212 1e-53 UniRef50_A6TQH0 Electron transport complex, RnfABCDGE type, D su... 203 9e-51 UniRef50_B8CY14 Electron transport complex, RnfABCDGE type, D su... 199 1e-49 UniRef50_A6LW78 Electron transport complex, RnfABCDGE type, D su... 199 2e-49 UniRef50_A4MZD3 Electron transport complex protein RnfD n=1 Tax=... 194 3e-48 UniRef50_A9BJD1 Electron transport complex, RnfABCDGE type, D su... 193 6e-48 UniRef50_B0K145 Electron transport complex, RnfABCDGE type, D su... 193 1e-47 UniRef50_Q2LXU1 Sodium-translocating NADH-quinone reductase subu... 192 1e-47 UniRef50_C7RDT6 Electron transport complex, RnfABCDGE type, D su... 190 8e-47 UniRef50_Q1Q5X4 Conserved hypothetical electron transport protei... 188 3e-46 UniRef50_B0VFN9 Electron transport complex protein rnfD n=1 Tax=... 186 1e-45 UniRef50_C9XNL3 Electron transport complex protein n=9 Tax=Bacte... 185 3e-45 UniRef50_A8ZSV3 Electron transport complex, RnfABCDGE type, D su... 183 7e-45 UniRef50_Q3B3R3 Electron transport complex, RnfABCDGE type, D su... 182 2e-44 UniRef50_D1N842 Electron transport complex, RnfABCDGE type, D su... 182 2e-44 UniRef50_C7GZP4 Na(+)-translocating NADH-quinone reductase, B su... 181 3e-44 UniRef50_UPI0001C35E54 electron transport complex, RnfABCDGE typ... 181 5e-44 UniRef50_B5YE56 RnfD/nqrB n=3 Tax=Bacteria RepID=B5YE56_DICT6 178 2e-43 UniRef50_B2A143 Electron transport complex, RnfABCDGE type, D su... 178 3e-43 UniRef50_C0WAW4 Putative uncharacterized protein n=1 Tax=Acidami... 177 3e-43 UniRef50_A9KRW8 Electron transport complex, RnfABCDGE type, D su... 175 2e-42 UniRef50_C1QFU9 Electron transport complex, RnfABCDGE type, D su... 174 5e-42 UniRef50_B3EJT7 Electron transport complex, RnfABCDGE type, D su... 174 5e-42 UniRef50_Q0TQI7 Electron transport complex, RnfABCDGE type, D su... 173 8e-42 UniRef50_B0PD31 Putative uncharacterized protein n=3 Tax=Clostri... 171 4e-41 UniRef50_Q52715 Electron transport complex protein rnfD n=1 Tax=... 169 1e-40 UniRef50_A5EVI1 Electron transport complex protein, D subunit n=... 167 7e-40 UniRef50_UPI0001BC5C0E Na(+)-translocating NADH-quinone reductas... 166 9e-40 UniRef50_A7C2T7 Electron transport complex, NQR2 and RnfD n=2 Ta... 166 1e-39 UniRef50_Q315L3 Electron transport complex, RnfABCDGE type, D su... 163 9e-39 UniRef50_C6BZS9 Electron transport complex, RnfABCDGE type, D su... 162 2e-38 UniRef50_C6L9Q2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 161 3e-38 UniRef50_Q73PG2 Na(+)-translocating NADH-quinone reductase, B su... 161 3e-38 UniRef50_D2RN95 Electron transport complex, RnfABCDGE type, D su... 161 3e-38 UniRef50_A5TRQ5 NADH dehydrogenase (Ubiquinone), RnfD subunit n=... 161 3e-38 UniRef50_B5JR41 Electron transport complex, RnfABCDGE type, D su... 161 4e-38 UniRef50_A1WUZ1 Electron transport complex, RnfABCDGE type, D su... 160 6e-38 UniRef50_B6WV80 Putative uncharacterized protein n=1 Tax=Desulfo... 160 7e-38 UniRef50_A1WT47 Electron transport complex, RnfABCDGE type, D su... 157 7e-37 UniRef50_D1U4Y0 Electron transport complex, RnfABCDGE type, D su... 156 1e-36 UniRef50_C7H9I4 Na-translocating NADH-quinone reductase, Nqr2 su... 155 2e-36 UniRef50_C3WYL8 Na(+)-translocating NADH-quinone reductase subun... 155 2e-36 UniRef50_B2A1V3 Electron transport complex, RnfABCDGE type, D su... 153 1e-35 UniRef50_D1VUL1 Electron transport complex protein RnfD n=1 Tax=... 151 3e-35 UniRef50_C9LBM8 Na(+)-translocating NADH-quinone reductase, B su... 150 8e-35 UniRef50_C6BTM1 Electron transport complex, RnfABCDGE type, D su... 149 1e-34 UniRef50_C4Z023 Electron transport complex protein RnfD n=38 Tax... 148 3e-34 UniRef50_C8WMP8 Electron transport complex, RnfABCDGE type, D su... 148 4e-34 UniRef50_B8J065 NQR2 and RnfD family protein n=1 Tax=Desulfovibr... 141 3e-32 UniRef50_C8WYR0 Electron transport complex, RnfABCDGE type, D su... 140 9e-32 UniRef50_C4FA61 Putative uncharacterized protein n=2 Tax=Collins... 139 2e-31 UniRef50_C1D7J0 Electron transport complex, NQR2 and RnfD n=3 Ta... 132 1e-29 UniRef50_B0S2D0 Sodium-translocating NADH-quinone reductase subu... 131 3e-29 UniRef50_C9A8K0 RnfD protein n=3 Tax=Enterococcus casseliflavus ... 130 7e-29 UniRef50_Q1Q257 Similar to Na(+)-translocating NADH-quinone redu... 128 4e-28 UniRef50_A6NPN1 Putative uncharacterized protein n=1 Tax=Bactero... 127 6e-28 UniRef50_B8FN65 NQR2 and RnfD family protein n=3 Tax=Desulfobact... 125 2e-27 UniRef50_C2MAM1 NADH:ubiquinone oxidoreductase, na(+)-translocat... 125 3e-27 UniRef50_A6L5A0 Na+-translocating NADH-quinone reductase subunit... 117 5e-25 UniRef50_D2MNQ0 NQR2 and RnfD family protein (Fragment) n=1 Tax=... 116 2e-24 UniRef50_Q5LC49 Electron transport complex protein RnfD n=42 Tax... 114 8e-24 UniRef50_A6TT06 NQR2 and RnfD family protein n=2 Tax=Bacteria Re... 112 1e-23 UniRef50_C6BWF3 NADH:ubiquinone oxidoreductase, subunit B n=2 Ta... 112 1e-23 UniRef50_B0P6D0 Putative uncharacterized protein n=1 Tax=Anaerot... 111 4e-23 UniRef50_A9NEB1 NADH oxidoreductase complex RnfABCDGE type, D su... 109 1e-22 UniRef50_A4BWI5 Na(+)-translocating NADH-quinone reductase subun... 108 3e-22 UniRef50_Q1QX85 Na(+)-translocating NADH-quinone reductase subun... 107 5e-22 UniRef50_A8ZWA7 NADH:ubiquinone oxidoreductase, subunit B n=4 Ta... 105 3e-21 UniRef50_B0MXK4 Putative uncharacterized protein n=1 Tax=Alistip... 105 3e-21 UniRef50_Q7MIC8 Na(+)-translocating NADH-quinone reductase subun... 104 4e-21 UniRef50_B9Y6Y9 Putative uncharacterized protein n=1 Tax=Holdema... 103 7e-21 UniRef50_C1I7V3 Putative uncharacterized protein n=1 Tax=Clostri... 103 9e-21 UniRef50_A4SQL9 Na(+)-translocating NADH-quinone reductase subun... 102 2e-20 UniRef50_C0EE37 Putative uncharacterized protein n=1 Tax=Clostri... 102 3e-20 UniRef50_A7HKQ1 NQR2 and RnfD family protein n=5 Tax=Thermotogac... 101 3e-20 UniRef50_Q1K3T0 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 101 5e-20 UniRef50_D1AFF8 NQR2 and RnfD family protein n=1 Tax=Sebaldella ... 101 5e-20 UniRef50_C0BFX7 NADH:ubiquinone oxidoreductase, subunit B n=1 Ta... 100 5e-20 UniRef50_A6WSA0 NADH:ubiquinone oxidoreductase, subunit B n=20 T... 99 2e-19 UniRef50_A4CPG2 Na(+)-translocating NADH-quinone reductase subun... 98 5e-19 UniRef50_A6DRQ1 Na(+)-translocating NADH-quinone reductase subun... 97 1e-18 UniRef50_A1ZH15 NADH:ubiquinone oxidoreductase, na(+)-translocat... 96 2e-18 UniRef50_C3X8F5 Electron transport complex n=1 Tax=Oxalobacter f... 95 3e-18 UniRef50_A9NGU6 Na+-transporting NADH:ubiquinone oxidoreductase ... 91 5e-17 UniRef50_C9N0N0 Electron transport complex, RnfABCDGE type, D su... 90 1e-16 UniRef50_UPI0001698867 electron transport complex, RnfABCDGE typ... 79 3e-13 UniRef50_A8S6D0 Putative uncharacterized protein n=2 Tax=Faecali... 78 5e-13 UniRef50_C7NCF4 NQR2 and RnfD family protein n=2 Tax=Leptotrichi... 75 4e-12 UniRef50_C7NE07 NADH:ubiquinone oxidoreductase subunit RnfD-like... 75 5e-12 UniRef50_Q12W78 Electron transport complex protein rnfD n=2 Tax=... 73 2e-11 UniRef50_UPI00016996B3 hypothetical protein Epers_17019 n=1 Tax=... 71 6e-11 UniRef50_Q3KM84 Na(+)-translocating NADH-quinone reductase subun... 70 1e-10 UniRef50_Q73MW5 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema ... 69 3e-10 UniRef50_UPI0001698C61 Electron transport complex, RnfABCDGE typ... 68 5e-10 UniRef50_B0MP93 Putative uncharacterized protein n=1 Tax=Eubacte... 67 1e-09 UniRef50_A8RDS0 Putative uncharacterized protein n=2 Tax=unclass... 64 9e-09 UniRef50_UPI00017427D7 electron transport complex protein RnfC n... 63 1e-08 UniRef50_D1RAM2 Putative uncharacterized protein n=1 Tax=Parachl... 62 3e-08 UniRef50_C8PP64 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema ... 59 4e-07 UniRef50_D1PJN0 Putative uncharacterized protein n=1 Tax=Subdoli... 57 9e-07 UniRef50_C0B3W9 Putative uncharacterized protein n=1 Tax=Proteus... 54 1e-05 UniRef50_UPI0001C372ED NADH:ubiquinone oxidoreductase, RnfD subu... 52 3e-05 UniRef50_A9D761 Na(+)-translocating NADH-quinone reductase subun... 51 7e-05 UniRef50_A7BVL8 Putative uncharacterized protein n=1 Tax=Beggiat... 40 0.097 >UniRef50_Q482U6 Electron transport complex protein rnfD n=103 Tax=Gammaproteobacteria RepID=RNFD_COLP3 Length = 353 Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust. Identities = 192/352 (54%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F IASSP+ HN +T +M LV+ A +PG+ AQ +FFGWG L+ I LA +A++ E Sbjct: 1 MAFWIASSPHNHNHTKTPNLMRLVIYATLPGVLAQWYFFGWGNLIHIGLAMTTAIICEFT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 VL LRK+ ++ L D SALLT LLL + +P LAPWW+ V+GT+FA++I KQLYGGLG NP Sbjct: 61 VLSLRKKPISHELFDGSALLTALLLGICLPALAPWWITVIGTMFAIVIVKQLYGGLGHNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM GYV+LL+SFP+QMT W PP + F + + I +G T G + +R I Sbjct: 121 FNPAMAGYVMLLVSFPLQMTLWQPPLTLVAVDLNFTNTLTTILTGFTVEGYSVEQVRTSI 180 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DGI+ ATPLDT KT+ G +V + ++ PI+ LA GW+WVN +L GG++L+ +KAI Sbjct: 181 DGITMATPLDTLKTNTGLGLTVLESIKNPIFGENLA-LGWEWVNAGFLLGGLFLISRKAI 239 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W P+SFL++L +C+ +G+ SP++ A+ H SGATMLGAFFILTDPVT +T+N+GR Sbjct: 240 AWQTPISFLLSLFICSFIGYSISPDSSASTMFHWFSGATMLGAFFILTDPVTGATSNKGR 299 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +I G LAGLLV+LIR+ GGYPDGVAFA+LL N++ PLID YTRPR YGH KG Sbjct: 300 IIVGLLAGLLVYLIRTSGGYPDGVAFAILLCNMSAPLIDQYTRPRTYGHLKG 351 >UniRef50_Q15RL2 Electron transport complex protein rnfD n=81 Tax=Proteobacteria RepID=RNFD_PSEA6 Length = 357 Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/351 (52%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +++ASSP+ H +R T ++M +V+ A +PGI Q WFFG+G LVQI LA ++A++ EA Sbjct: 1 MNYKLASSPHQHVRRNTGQVMRMVIYALIPGILLQTWFFGFGVLVQIALAVITAVVTEAT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L++RK++ +KD SA+LT +LLA+SIPP APWW++V+GT FA+ + KQLYGGLG N Sbjct: 61 ILEMRKRNFERAIKDYSAILTAILLAISIPPFAPWWVIVIGTFFAIAMVKQLYGGLGFNV 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM YV+LL+SFPVQMT WLP + + PG IDAI +F+G +A G + L+ Sbjct: 121 FNPAMAAYVMLLVSFPVQMTQWLPAQSLTAHQPGLIDAIYAVFTGFSADGFSLAQLQGAA 180 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DG + ATPLD KT + G + E+ +Q I+ G L G GW WV+ +L GG++L+ K I Sbjct: 181 DGHTMATPLDAIKTGLAQGLTYEEGLQSAIFDGSL-GIGWWWVSTGYLLGGLYLIRAKII 239 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 WHIP L ALCA + +L + A+P H+ +G+ +LGAFFI TDPV+ASTTN+GR Sbjct: 240 NWHIPGGMLAGAALCAGVMFLVDADRFASPLFHIFNGSLILGAFFIATDPVSASTTNKGR 299 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +IFGA G V++IR++GGYPD +AF+VL+ N+ VPLIDYYTRPR YGH K Sbjct: 300 IIFGAAIGFWVYVIRTWGGYPDAIAFSVLIMNMAVPLIDYYTRPRTYGHTK 350 >UniRef50_Q4QJQ5 Electron transport complex protein rnfD n=74 Tax=Gammaproteobacteria RepID=RNFD_HAEI8 Length = 358 Score = 341 bits (874), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 175/353 (49%), Positives = 248/353 (70%), Gaps = 6/353 (1%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 +F++ SSP+TH+ + T+ IML V+LA +P Q+++FG+G ++Q LA +A++AE + Sbjct: 1 MFKMVSSPHTHSGKLTAHIMLWVILAMMPAFFTQIYYFGFGVVLQSALAIGTAIIAEFIA 60 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 +KLR + L D S LT L+LA++IPP AP+W++++GT+ AV++ KQ+YGGLGQNPF Sbjct: 61 IKLRGKKPLNYLSDFSVALTALILAMAIPPYAPYWIIIIGTLCAVLLGKQVYGGLGQNPF 120 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPAMIGYV+LLISFP+QMT+W+PP + P F D +IFSG T G ++ L ID Sbjct: 121 NPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDTFSLIFSGLTTDGFTLSQLTHNID 180 Query: 182 GISQATPLDTFKTSVRAGHSVE---QIMQYPIY--SGILAGAGWQWVNLAWLAGGVWLLW 236 GI+QATPLD+ K ++ + + ++++ PI+ +G GW +N+A+LAGG++L+ Sbjct: 181 GITQATPLDSAKIFYKSHNQLSDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLIL 240 Query: 237 QKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTT 296 ++ I W IP++ LVT C F+ T + L+SGA M GAFFI TDPVTAS T Sbjct: 241 KRIIHWQIPVAMLVTF-FCLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASIT 299 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 RG++IFGAL GL V+LIR G YPDGVAFA+LL+NI VPLID+YTRPRV G+ Sbjct: 300 PRGKIIFGALVGLFVYLIRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGY 352 >UniRef50_D0L1N4 Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Gammaproteobacteria RepID=D0L1N4_HALNC Length = 349 Score = 316 bits (809), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 170/352 (48%), Positives = 230/352 (65%), Gaps = 9/352 (2%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F ++P R+ML VLLA +PG A + GWG L+ ILLA ++ L+AEA Sbjct: 1 MKFSPQTAPLPEVSNSVRRVMLTVLLAMLPGTAVAIALLGWGVLINILLAVIAGLVAEAA 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L LR + V + D S ++ +LA+ +P L PWW+ V GTVFAV++AKQLYGGLG N Sbjct: 61 MLTLRARPVRPAIGDGSVIVLAWILALCLPNLGPWWLPVFGTVFAVVVAKQLYGGLGFNL 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GYVVLLISFP MT W P + + + F+ ++ FSG +G +G Sbjct: 121 FNPAMVGYVVLLISFPEPMTRWGPAIDSSGSALNFMQSLAWSFSGVLPNG-------VGY 173 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQ-WVNLAWLAGGVWLLWQKA 239 DG+S ATPLD + + G ++ + Q ++SG W W++LA+LAGG +LLW+ Sbjct: 174 DGLSVATPLDHAREQLSTGATIHNVTQS-LFSGTSLAQSWNLWLSLAFLAGGAFLLWRGV 232 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 IRWHIP++ + + + + WL A+P HL++GAT+ GAFF+ TDPVTASTT RG Sbjct: 233 IRWHIPVAMITGVLVMSGFLWLLDSARHASPLFHLITGATVFGAFFVATDPVTASTTPRG 292 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 RLIFG G+L LIRSFG YPDGVAFAVLL N+ VPLIDYY++P+V+GH+K Sbjct: 293 RLIFGFGIGVLTVLIRSFGSYPDGVAFAVLLMNLCVPLIDYYSQPKVFGHKK 344 >UniRef50_B3PB33 Electron transport complex protein rnfD n=91 Tax=Gammaproteobacteria RepID=RNFD_CELJU Length = 356 Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 174/351 (49%), Positives = 240/351 (68%), Gaps = 20/351 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 +SP+ +TSR+MLLV+ A +PG+ WFFG G LV +LLAS+S +L EAL +K R+ Sbjct: 7 TSPHAQGANRTSRLMLLVVYATIPGMFTMTWFFGPGVLVNVLLASISCMLFEALAIKARQ 66 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + V L+D SAL+TG+L+ VS+PP PWW+++ G+ A+I+AKQLYGG+G NPFNPAM+ Sbjct: 67 RPVGFYLRDFSALVTGVLIGVSLPPYCPWWLLISGSFIAIILAKQLYGGMGFNPFNPAMV 126 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVN--IPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 Y +LL+SFPV+MT W P + V+ +PG +D + +FSG IDG S Sbjct: 127 AYALLLVSFPVEMTQWAQPKPLWVDGQLPGLMDTLAKVFSGAP------------IDGYS 174 Query: 185 QATPLDTFKTS--VRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 AT LD K + + G +Q Q + G A AGW+WVN+A+L GG++LL++K W Sbjct: 175 GATALDIIKQNKGLVLGDLYQQ--QPLLAEGRWASAGWEWVNIAFLFGGLYLLYKKVYTW 232 Query: 243 HIPLSFLVTLALCAMLGW-LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 H P+S L+ LAL A L + S + +P HLL+GATMLGAFFI+TDPV+++ + +GR+ Sbjct: 233 HAPVSMLLALALMAALFYDSGSSSSSGSPLFHLLTGATMLGAFFIVTDPVSSTVSTKGRV 292 Query: 302 IFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+GAL G+LV++IR++G YPDGVAFAVLL N P IDYYT PR YGH+K Sbjct: 293 IYGALIGMLVYVIRTWGSSYPDGVAFAVLLMNFAAPFIDYYTTPRTYGHKK 343 >UniRef50_Q31GU5 NADH oxidoreductase, RnfABCDGE type, D subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GU5_THICR Length = 343 Score = 307 bits (786), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 155/345 (44%), Positives = 221/345 (64%), Gaps = 8/345 (2%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 +SP+THN ++ML V +AA P + ++FFG+G +Q LA ++ ++ E +LKLR Sbjct: 7 TSPFTHNASSVRKVMLQVQIAAFPALMTHIYFFGFGITIQWTLAVLTLIIVETTLLKLRD 66 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + VA L D S L+T + IPP APWW++V G FA+I K LYGGLG NPFNPAM+ Sbjct: 67 RPVAPYLFDLSGLITVTGIVFCIPPEAPWWVIVSGVTFALIFGKHLYGGLGYNPFNPAML 126 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 GY LLISFP ++T W P E++ + FI++ +IF+G + L L D ++ A Sbjct: 127 GYAFLLISFPAELTQWTLPSEVSGHHISFIESFHLIFTGQS--------LNLSFDQLTGA 178 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 TPLD KT++ G V + ++G GW W+N+A+ GG+W+L+++AIRW P+ Sbjct: 179 TPLDEVKTALSMGVPVTTTLNSSNFNGEQIPYGWAWINMAFFLGGLWMLYKRAIRWQYPV 238 Query: 247 SFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL 306 FL TLA A L P T A HLL+G ML AFFI+TDPVT+STT GR ++ A Sbjct: 239 GFLGTLAAIAYLFNWIDPNTYAPASFHLLTGGIMLAAFFIITDPVTSSTTPLGRFVYAAG 298 Query: 307 AGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +LV++IR++G +PDG+AF +L+ N+ VPLID YT+PRV G+R+ Sbjct: 299 IAVLVYVIRNWGAFPDGIAFGILIMNMFVPLIDQYTQPRVVGYRR 343 >UniRef50_Q89AW7 Electron transport complex protein rnfD n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RNFD_BUCBP Length = 354 Score = 307 bits (786), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 151/344 (43%), Positives = 219/344 (63%), Gaps = 6/344 (1%) Query: 12 HNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAA 71 ++ + TS IMLLV AAVPGI ++++FG+G L QILL+ ++ E LV +LRKQ+V + Sbjct: 11 YHHKNTSEIMLLVFCAAVPGICTEIYYFGFGVLFQILLSVFFSVSFEFLVKRLRKQTVKS 70 Query: 72 TLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVL 131 DNSA +TG+L+ +S+P L+PWW+ G F+++IAKQ+YGGLG N FNPAM GY +L Sbjct: 71 LFSDNSAAVTGVLIGISLPSLSPWWLSFFGAFFSIVIAKQIYGGLGNNIFNPAMTGYSIL 130 Query: 132 LISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFS---GHTASGGDMNTLRLGIDGISQATP 188 L+SFP+ MT+W + N+ + VIF H S D ++ I+QATP Sbjct: 131 LVSFPILMTNWSFQNSSYFNLFDLNNTFSVIFCTDINHYYSLID--EFQMMYKFITQATP 188 Query: 189 LDTFKTSV-RAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 L+ +T V + ++ I ++ Y+ W +N+++L GG+ LL I W IP+S Sbjct: 189 LEQIRTHVLDFNNKIDNIFEFVNYNYYFKNWKWISINISFLIGGIVLLGFNVICWRIPVS 248 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L +L + L + F +++ P + L G+TM FFI TDPVT S T GR++FG + Sbjct: 249 ILFSLYVFFALDYYFFKKSMYYPIMQLFFGSTMFSVFFIATDPVTTSITKIGRIVFGCIV 308 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G L+WLIRSFG YPD +AF++LL+N VPLID+YT+PRVYG+ K Sbjct: 309 GFLIWLIRSFGNYPDAIAFSILLSNSIVPLIDHYTQPRVYGYVK 352 >UniRef50_B8D8R7 Electron transport complex protein rnfD n=4 Tax=Buchnera aphidicola RepID=RNFD_BUCA5 Length = 347 Score = 304 bits (778), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 144/346 (41%), Positives = 215/346 (62%), Gaps = 6/346 (1%) Query: 9 PYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQS 68 P ++ +IM LV++A +PGI A+ +FFG GTL+QI + +L+ E ++LK+R ++ Sbjct: 4 PCIYHVYSIRKIMFLVIVACLPGIFAKYYFFGIGTLIQIFFSIFISLVLEIIILKIRSKN 63 Query: 69 VAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGY 128 + L+D S +LT +L VSIPPL PWWM +G FA+++AK LYGG+GQN FNPAM+GY Sbjct: 64 IKNYLQDTSLVLTSVLFGVSIPPLLPWWMTSIGLFFAIVVAKHLYGGIGQNIFNPAMVGY 123 Query: 129 VVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATP 188 VLLISFPV M +W F + +IF + + + L + D + ATP Sbjct: 124 AVLLISFPVYMNNWNERDFSLSFFNDFKKSAYIIFFKNDITTVSSSYLNIIPDAFTTATP 183 Query: 189 LDTFKTSVRAGHSV---EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIP 245 L+ FK E I++ + W+ +N+++ GG++LL+ K I W IP Sbjct: 184 LNNFKIKSHLKDDFFLKENIIK---NKEVSIQTSWKCINISFFLGGIFLLFTKIICWRIP 240 Query: 246 LSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGA 305 +SFL +L + +++ + +S E +PQ+H SG TM+ AFFI TDPVTA+ N G+++FG Sbjct: 241 ISFLSSLGMLSIITYFYSKELFMSPQVHFFSGGTMICAFFIATDPVTAACNNVGKIVFGI 300 Query: 306 LAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + G LVW+IR++ YPD +AF+VL AN+TVPL+DYYT+ YG Sbjct: 301 IIGFLVWIIRNYSDYPDAIAFSVLFANMTVPLVDYYTKSSGYGRNN 346 >UniRef50_B9ZJX0 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Gammaproteobacteria RepID=B9ZJX0_9GAMM Length = 353 Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 158/352 (44%), Positives = 232/352 (65%), Gaps = 8/352 (2%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M FR SSP+ +M VL+A VPG A WFFGWG LV +LL + A+ EA Sbjct: 1 MRFRTQSSPHVIPAHSVGGVMQQVLMALVPGTLAMTWFFGWGVLVNVLLGVLFAVAFEAA 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 ++ RK+ V ATL DNSA++TG L A++IPPLAP+W+ ++G FA+I+AK LYGGLG NP Sbjct: 61 MVAARKRPVMATLADNSAIVTGWLFALAIPPLAPFWVTLIGIAFAIIVAKHLYGGLGYNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GYVV+L+SFP +M W P + + + +Q + +G Sbjct: 121 FNPAMVGYVVVLVSFPREMALWPAPSTLPESPLTLLQTLQTVLTGSLPGAQAW------- 173 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D +++ATPLD + + +G +V +I P++ G GW+WV +L GG++LL+++ I Sbjct: 174 DAVTRATPLDAMREGLVSGRTVGEITASPLF-GSFTETGWEWVGNFFLLGGLYLLFRRII 232 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 WHIP++ ++ +A+ A WL P++ A+P H+ SGA ++GAFFI TDPV+ASTT GR Sbjct: 233 HWHIPVAVILGVAIPAGFFWLLDPDSFASPAFHVFSGAVIIGAFFIATDPVSASTTPLGR 292 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +++GA G+L+++IR++GGYPD VAFAVLL N+ P +D+ TRPR++G +G Sbjct: 293 ILYGAGIGVLIFVIRTWGGYPDAVAFAVLLMNMVAPTLDHLTRPRIFGRTRG 344 >UniRef50_A5CXQ4 Electron transport complex protein RnfD n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXQ4_VESOH Length = 314 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 221/335 (65%), Gaps = 28/335 (8%) Query: 16 QTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKD 75 TS +M V+ A GI +FFGWG ++QI+L ++A+ E+ L R + + +++ D Sbjct: 7 STSWMMRQVIYALALGIVVSYYFFGWGIVLQIVLGVITAVAVESAFLAFRGRDIISSISD 66 Query: 76 NSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISF 135 S +LT +LLA+SIP +APWW++++G FA+I KQLYGGLG N FNPAM+GYV LLIS+ Sbjct: 67 GSIILTAILLAISIPNIAPWWVIIVGISFAIIFGKQLYGGLGNNLFNPAMLGYVFLLISY 126 Query: 136 PVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTS 195 P+QM++W +N F A++V+F+ ID IS AT LD K S Sbjct: 127 PLQMSTW------PINFLSFDQALEVVFNLSN------------IDAISGATRLDEIKNS 168 Query: 196 VRAGHSVEQI-MQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLAL 254 + +S++Q+ + +P W+N+ + GG++LL++K I WHIP+SFLV + + Sbjct: 169 LSLSNSIKQLEIHFP---------SQVWINVGFFFGGLYLLFRKIISWHIPVSFLVGIVI 219 Query: 255 CAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLI 314 ++L W+ + + Q H++ G TMLGAFFI TDPV+ASTT GR+I+G L G+L+ +I Sbjct: 220 TSVLLWISNVDLYIPMQNHIMLGGTMLGAFFIATDPVSASTTINGRIIYGFLIGVLIVII 279 Query: 315 RSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 R+FGGYPDG+AFAVLL N+TVPLID YT+P+V+G Sbjct: 280 RTFGGYPDGIAFAVLLMNMTVPLIDVYTQPKVFGQ 314 >UniRef50_Q3SHB5 Electron transport complex, RnfABCDGE type, D subunit n=7 Tax=Betaproteobacteria RepID=Q3SHB5_THIDA Length = 342 Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 160/344 (46%), Positives = 227/344 (65%), Gaps = 9/344 (2%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 SPY ++ + +M VL A +PGI +W FG G L+ + +A+V+A+ AEA +LK R Sbjct: 3 SPYILDRTSVTVVMAWVLAALLPGIGVYVWLFGPGILLTLSIATVTAVAAEAGMLKARGY 62 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 + L D SA++T LLA+S+P LAPWW++V GT+FA+++AK LYGGLGQN FNPAM+G Sbjct: 63 PIKPFLGDLSAVVTAWLLALSLPSLAPWWLIVTGTLFAIVVAKHLYGGLGQNVFNPAMVG 122 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 Y VL++SFPVQMT W P E+ G + +IF G D+ L D ++ AT Sbjct: 123 YAVLIVSFPVQMTQWAGPLELTATPLGIGQSAAIIF------GADVPKSLL--DAVTMAT 174 Query: 188 PLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 PLDT +T + H+V+++++ PI+ G L G G++W+ A+L GG+ L + I W +PL+ Sbjct: 175 PLDTLRTGLLQQHTVDEVVRQPIF-GYLGGTGFEWLAAAFLLGGLLLWALRIISWQVPLA 233 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 FLV + L A F AP H+ + + MLGAFFI TDPV+ +TT RG+++FG A Sbjct: 234 FLVGVWLTAGFLHFFDAGRFGAPWFHVFAPSVMLGAFFIATDPVSGATTPRGKVVFGLGA 293 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G L +IR++GG+PDGVAFA+LL N+ VPLID YT+PRVYG + Sbjct: 294 GFLTIVIRTWGGFPDGVAFAILLMNLCVPLIDQYTQPRVYGEVR 337 >UniRef50_B6BWH4 Na-translocating NADH-quinone reductase, Nqr2 subunit n=2 Tax=Betaproteobacteria RepID=B6BWH4_9PROT Length = 332 Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/344 (40%), Positives = 206/344 (59%), Gaps = 16/344 (4%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 SP + + IM V+L +P + Q+ FFG+ L + AL EA+ LKLR Sbjct: 5 DSPAIKERSTVNMIMFTVILGLLPALFLQIGFFGYQILGNLFFGIGFALFLEAVCLKLRN 64 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + + D SA +T LL +S+P P W +++G F++++AK YGG+G NPFNPAMI Sbjct: 65 YPIRPFILDGSAFVTAWLLIISVPANIPIWTLLIGIFFSIVVAKHAYGGIGSNPFNPAMI 124 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 GY VLLISFP MT+W P I FI Q ++ + D I A Sbjct: 125 GYAVLLISFPKIMTNW--PISDGFEIRNFIQFSQFF---------SISNINEAYDAIVSA 173 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 TPLD KTS+ G V+ + PI L+ +Q + + + GG++L+++K I WH+PL Sbjct: 174 TPLDQIKTSLFLGKEVDVL---PISFSTLSS--YQMIAILYFLGGLFLVYKKVITWHLPL 228 Query: 247 SFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL 306 S ++++ + + L L+ T +P HLL+GAT L AFFI+TDPV++ TT +G++IFG L Sbjct: 229 SLILSVYIFSGLLHLYDQNTYMSPTFHLLNGATFLAAFFIITDPVSSPTTLKGKIIFGIL 288 Query: 307 AGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 GL+ +IR++GGYPDG+AFAV+ NI VPLI+ +T+P+V+G+ Sbjct: 289 IGLITVIIRNYGGYPDGIAFAVIFMNICVPLIEKFTQPKVFGYE 332 >UniRef50_C4L9H7 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9H7_TOLAT Length = 326 Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 141/349 (40%), Positives = 199/349 (57%), Gaps = 36/349 (10%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 I +P+ H ++M V +A +P + + FG L ++ +SAL E + LKL Sbjct: 3 ILRAPHAHEGISIKKVMFKVNIALLPAVLLGILQFGMPALFLVVTTILSALACEVISLKL 62 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 ++ + D +A+LT L+LA+S+PP AP W+ LG+ FA+ KQ+YGGLGQN FNPA Sbjct: 63 NPRA-QGKINDGAAILTALILAMSLPPHAPLWLGALGSAFAIFFGKQVYGGLGQNLFNPA 121 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 M+ VVLLISFPV+MT W+ P F D I ++G+DG+S Sbjct: 122 MLARVVLLISFPVEMTKWITPS-------AFYDGIWY---------------KMGVDGVS 159 Query: 185 QATPLDTFKTSVRAG-HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 AT L K G H + ++ G G+ + + L GGVWL+ Q+ WH Sbjct: 160 GATTLGLSKEGAETGFHWLSHVL------GTSTGSLGETSAMLMLLGGVWLIHQQVFTWH 213 Query: 244 IPLSFLVTLALCAMLG---WLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 +PL+ TLA C + G WL P + P L SG ++ AFFI TDPVT T+NRG+ Sbjct: 214 VPLA---TLAGCLLPGTAMWLSDPAAIPEPLAQLTSGGLLMCAFFIATDPVTTPTSNRGK 270 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 LIFGA G L+++IR+FG +P+GVAF++L+ N PLID YTRPR+YG+ Sbjct: 271 LIFGAGTGFLIFVIRAFGNFPEGVAFSILIMNAVTPLIDQYTRPRMYGY 319 >UniRef50_A0L5G5 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Proteobacteria RepID=A0L5G5_MAGSM Length = 355 Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 143/359 (39%), Positives = 214/359 (59%), Gaps = 18/359 (5%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SSP+ H ++ML V+ A P ++ FGW L+ I+L +S ++ E L Sbjct: 1 MTLMTSSSPHVHGGDSVDKVMLNVIKALAPATLLSIFLFGWPALLVIVLTVLSCVVMERL 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 LR + +T+ D SA+LTGLLLA+++PP +PWW+ V+G VFA+ + K +YGGLG N Sbjct: 61 TNMLRGR--PSTIGDYSAILTGLLLALTLPPHSPWWICVVGGVFAIGVGKSVYGGLGYNM 118 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEI-AVNIPGFIDAIQVIFSGHTASGGDMNTLRLG 179 FNPA+I V LLISFPVQ+T+W + A + + +IF+G S + Sbjct: 119 FNPALIARVFLLISFPVQLTTWPQISPLFAADSFSLAQSFSIIFAGDYGS--------VV 170 Query: 180 IDGISQATPLDTFKTSVRAGHSVEQIMQYPI-------YSGILAGAGWQWVNLAWLAGGV 232 +D I+ ATPL ++ G SV + + +G + G+ + LA +AGG+ Sbjct: 171 MDSITAATPLGHYRIETGLGKSVAEALGGDFGFSFSHSIAGDIGGSLGETSALALVAGGI 230 Query: 233 WLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVT 292 W++ + I WHIP+S ++ + A + WL + + P HL++G +LGAFF+ TD VT Sbjct: 231 WMIRKGLITWHIPVSMILGTVIPATVMWLINGDVYPDPLFHLVTGGLLLGAFFMATDMVT 290 Query: 293 ASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + T RG LIFG L G+L ++IR++GGYP+GV+FAV++ N VPLID YT+P VYG K Sbjct: 291 SPVTPRGMLIFGGLCGVLTYVIRTWGGYPEGVSFAVVIMNTAVPLIDQYTKPVVYGKSK 349 >UniRef50_A1WTR8 Electron transport complex protein rnfD n=2 Tax=Proteobacteria RepID=RNFD_HALHL Length = 357 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 142/355 (40%), Positives = 212/355 (59%), Gaps = 19/355 (5%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 + + P+T +M VLLAA P A +W +GW L +L+ V+ L+AEA L+ Sbjct: 3 ELVAGPHTRAPLSLPTLMRQVLLAAAPATAFGVWLYGWPALNLLLITLVTVLVAEAACLR 62 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + V + L D+SAL+ G +LA+S+PP APWW+ V+G + AV++ K ++GG GQN FNP Sbjct: 63 AAGRPVRSGLGDSSALVAGWILAMSLPPWAPWWIGVIGGLLAVVLGKGVFGGTGQNLFNP 122 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNI-PGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 AM+ V LLI+FPV+MT W+ P + + PGF++++ + F+G D Sbjct: 123 AMVARVALLIAFPVEMTRWVEPAPLGSAVAPGFLESLGITFTGTA-----------DWDA 171 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLA------GGVWLLW 236 ++ AT LD +T+V G S+E + Y LA G+ +LA + GGV+L++ Sbjct: 172 VTGATTLDATRTAVTEGQSIETALPE-AYQPALALLGYAPGSLAEGSALLLALGGVYLIY 230 Query: 237 QKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTT 296 ++ I W IP L TLA+ A + P A +H+L+G+T+L AFFI TDP T+ TT Sbjct: 231 RRVIAWEIPAVMLATLAVLATVFHTLDPTRYADAGVHILAGSTLLAAFFIATDPTTSPTT 290 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GR +F A ++VW++R++GGYP+ AFAVLL N PLID++ RPRVYG + Sbjct: 291 TVGRAVFAAGCAVIVWVVRTYGGYPEATAFAVLLMNAFTPLIDHWIRPRVYGRTR 345 >UniRef50_Q3A7W9 NADH:ubiquinone oxidoreductase, RnfD subunit-like n=4 Tax=Bacteria RepID=Q3A7W9_PELCD Length = 334 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 135/350 (38%), Positives = 194/350 (55%), Gaps = 33/350 (9%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ SP+ H T +M V+LA +P ++ FG + + + SA+ EAL Sbjct: 7 LLSVSCSPHLHCGMTTRGMMGAVILALLPAAVVAVYLFGLAAVAVMTICVASAVAVEALW 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K V T+ D SA+LTGLL+A ++PP +PWW+ +LG+V A++I KQ++GGLG NPF Sbjct: 67 QKAVGSPV--TVSDGSAVLTGLLVAFNLPPSSPWWLALLGSVIAIVIGKQVFGGLGHNPF 124 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++ +VLL+SFP MT W P PG R D Sbjct: 125 NPALVARIVLLVSFPTVMTHWSGPQ------PG----------------------RFLAD 156 Query: 182 GISQATPLDTFKTSVR-AGHSVEQIMQYPIYS--GILAGAGWQWVNLAWLAGGVWLLWQK 238 ++ ATPL K++V +GH + + G +AG + LA L G ++LLW++ Sbjct: 157 AVTAATPLSETKSAVMLSGHLPPNATGFALDYLLGNMAGCLGEVSALALLIGALFLLWRR 216 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I WHIP+S++ T+A + + WL P P HLLSG MLGAF++ TD VT+ T R Sbjct: 217 VISWHIPVSYIGTVATVSGMFWLVDPSRYPHPVFHLLSGGLMLGAFYMATDLVTSPLTGR 276 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 L++G GL LIR FG YP+GVAF++LL N PL+D Y PR +G Sbjct: 277 SMLLYGCGCGLFTVLIRLFGSYPEGVAFSILLMNTVTPLLDRYLVPRPFG 326 >UniRef50_Q0AAH0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAH0_ALHEH Length = 313 Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 146/328 (44%), Positives = 189/328 (57%), Gaps = 20/328 (6%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 + IM VL A VPG A WF G G V + +A V+A+ EA V LR++ A L D+S Sbjct: 2 AAIMRQVLYALVPGTLALAWFQGVGVFVHLAVALVTAVAVEAAVQWLRRRPATAALSDHS 61 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 L+TG +LA+++PPLAPWW+ T+FAV+ K LYGGLG NPFNPAM+GYV+ LI+FP Sbjct: 62 VLVTGWILALAVPPLAPWWVTASATLFAVLFGKHLYGGLGFNPFNPAMVGYVMALIAFPR 121 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 +MT W P G +A++ + G D TL D ++ ATPLD T Sbjct: 122 EMTFWFPAAAPGDWPVGAWEAVRGVLVGL-----DAPTL----DALTGATPLDLLHTGAP 172 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 G ++ + +G GW L +LAGG+WLL + I + IP ++ Sbjct: 173 PGGALA----------VESGPGWMVAPLLFLAGGLWLLRCRLIDFRIPAG-MLGAMALLA 221 Query: 258 LGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 P P HLL+G T+LGAFF+ TDPV+A+TT RGR ++GA G L LIR F Sbjct: 222 TLLWLLPGEQPDPLFHLLAGGTLLGAFFVATDPVSAATTARGRWVYGAGIGALALLIREF 281 Query: 318 GGYPDGVAFAVLLANITVPLIDYYTRPR 345 GGYPDGVAFAVLL N P IDY RPR Sbjct: 282 GGYPDGVAFAVLLMNGAAPFIDYCFRPR 309 >UniRef50_Q9EVN4 Electron transport complex protein rnfD n=20 Tax=Proteobacteria RepID=RNFD_PSEST Length = 354 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 146/343 (42%), Positives = 193/343 (56%), Gaps = 18/343 (5%) Query: 14 QRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATL 73 + RIML V LA +P A L+ FGW + LL SA+ EA L Sbjct: 3 RSSVDRIMLHVCLALLPTTAWGLYLFGWPAIYLWLLTCASAVACEA-ACLYLLGRPLRRL 61 Query: 74 KDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLI 133 D SALL+G LLA+++PP APWW+ V G++FA+ I KQLYGG+GQN FNPAM+ V LLI Sbjct: 62 LDGSALLSGWLLALTLPPWAPWWIAVGGSMFAIGIGKQLYGGVGQNVFNPAMLARVALLI 121 Query: 134 SFPVQMTSWLPPHEIAVN-IPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 +FP+QMT+W P + PG+++ +++ F+G + DG+S AT L Sbjct: 122 AFPLQMTTWALPLPLGTEGAPGWLEGLRITFAGGALA-----------DGLSGATALGHL 170 Query: 193 KTSVRAGHSVEQIMQ-----YPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 +T + GHS QI+ P + G G+ + L L GG+WLL + I W IPL Sbjct: 171 QTELTLGHSAAQILDGHFALLPAFLGYSGGSLGETSELLILLGGLWLLALRIIHWEIPLG 230 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L+T+ A L P+ HL SG +LGA FI TDPVT+ + GRLIF Sbjct: 231 MLLTVGALAALANQIDPQVHGGGLFHLTSGGLLLGALFIATDPVTSPISRSGRLIFAIGC 290 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 G LV++IRS+G +P+ VAFAVLL N VPLID RPR YG Sbjct: 291 GALVFVIRSWGNFPEAVAFAVLLMNALVPLIDRVCRPRAYGRN 333 >UniRef50_Q4K755 Electron transport complex, RnfABCDGE type, D subunit n=7 Tax=Pseudomonas RepID=Q4K755_PSEF5 Length = 330 Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 142/340 (41%), Positives = 209/340 (61%), Gaps = 18/340 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 + P T + R + M VLLA +PG+ LW + WG L+ +LLA+ AL EALVL LR+ Sbjct: 2 TCPETVDPR-LRQAMQRVLLATLPGLLVLLWLYAWGPLLNLLLAASGALAMEALVLFLRR 60 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + + L D SAL++ LLA+++PP PWW+ + AV++ KQ+YGG+GQNPFNPAM+ Sbjct: 61 RPLQPALSDGSALVSATLLALALPPYCPWWLPLSAAASAVLLGKQVYGGVGQNPFNPAML 120 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 GY + L+ FP MT W PH + + + +Q +F GG+ D +QA Sbjct: 121 GYALALLCFPQSMTHWPAPHALDL-----LGGLQQVF----GLGGNPPP-----DAWAQA 166 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 T LD+ + + +V+++ G G G +WVNL +LAGG++LL Q+ I W P+ Sbjct: 167 TALDSLR--INKSLTVDELFAGNPAFGHFGGRGTEWVNLGFLAGGLFLLQQRVIGWQAPV 224 Query: 247 SFLVTLALCAMLGWLFS-PETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGA 305 L +L L ++L W S ++ +P HLLSGA+MLGAFFI+T+PV+ + RL+FG Sbjct: 225 GMLGSLLLISLLCWNGSGSDSHGSPLFHLLSGASMLGAFFIVTEPVSGPKAAKARLLFGV 284 Query: 306 LAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPR 345 GLL +LIR++GGYPDG+AFAVLL N+ VP ++ + + Sbjct: 285 GVGLLTYLIRTWGGYPDGLAFAVLLMNLAVPALERLSSEK 324 >UniRef50_Q5P536 Electron transport complex protein rnfD (Nitrogen fixation protein rnfD) n=4 Tax=Bacteria RepID=Q5P536_AZOSE Length = 362 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 147/349 (42%), Positives = 195/349 (55%), Gaps = 19/349 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 +SP+ H +R M V LA +P W FGW V + +V A + LV + R Sbjct: 11 ASPHAHGGASIARTMRHVQLALLPATLFGFWLFGW-PAVHLFAVTVGACVLTELVCQ-RL 68 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 V ++L D SALLTG LLA+S+PP AP W+ LG A+ I KQL+GGLGQN FNPAM+ Sbjct: 69 MRVESSLGDGSALLTGWLLALSLPPWAPAWIGALGGFIAIAIGKQLFGGLGQNLFNPAMV 128 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVN-IPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQ 185 V LL+SFPV MT W+ P + + P F + + + + D I+ Sbjct: 129 ARVALLVSFPVVMTQWVAPLPMTADGAPAFGEGLWITLASPPVP-----------DAIAS 177 Query: 186 ATPLDTFKTSVRAGHSVEQIM---QYPIYS--GILAGAGWQWVNLAWLAGGVWLLWQKAI 240 A+ L KT + G V + P++S G AG+ + + LAGG++LL I Sbjct: 178 ASLLGHAKTELSRGVDVLHAIGAATDPLFSWVGSRAGSLGETGAIFLLAGGLYLLATGVI 237 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RWHIPL+ L LA+ A +G P HLLSGA +LGAFFI TD VT+ T G+ Sbjct: 238 RWHIPLAVLAGLAIPAAIGHALDPAHYLPASAHLLSGAAILGAFFIATDYVTSPNTTFGQ 297 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 L+FG G L W+IRS+GGYP+G+AFAVLL N P+ID Y RPR+ G Sbjct: 298 LVFGFGIGFLTWIIRSWGGYPEGMAFAVLLLNALTPVIDRYCRPRILGR 346 >UniRef50_C1SKX3 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKX3_9BACT Length = 332 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 130/356 (36%), Positives = 203/356 (57%), Gaps = 49/356 (13%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 SP+ + T+ +M+LV+ A +P + ++++G + L+ + E L K+ + Sbjct: 14 SPHDRDPMTTNVVMMLVVAALMPSVIGSIYYYGHYAVKGYLVTIFFCIAFEYLFDKISHR 73 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 +KDNSALLTG+LLA+++P APWW++++G+ A++I+K +YGGLGQNPFNPA++G Sbjct: 74 K--TQIKDNSALLTGVLLAMNMPAGAPWWLMLIGSFVAIVISKAVYGGLGQNPFNPALVG 131 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 V LLI++P +MT+W+ P Q + +G L D +S AT Sbjct: 132 RVFLLIAWPAEMTAWIVP--------------QTVKNG------------LVFDAVSTAT 165 Query: 188 PLDTFKTSVRA-GHSVEQIMQYPIYSGILAGAGWQWV-NLAWLAGG----------VWLL 235 PL + K + + GH V +G +A Q + N++ GG + LL Sbjct: 166 PLGSMKADLLSQGHVV---------AGNIAPLTNQLIGNVSGSLGGDSALLVLIGGLVLL 216 Query: 236 WQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTAST 295 Q+ I WHIP+SF+ T+ + + W +PE P +H++SG MLGAFF+ TD VT+ Sbjct: 217 QQRIISWHIPVSFIGTVFVLTGIYWGIAPEMTINPLMHVVSGGVMLGAFFMATDYVTSPM 276 Query: 296 TNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + R +LIFG GL+ +IR FG YP+GV FA+L+ N VPL+D Y RP+ +G + Sbjct: 277 SKRAQLIFGFGCGLITVVIRLFGSYPEGVGFAILIMNAFVPLLDNYMRPKSFGEKS 332 >UniRef50_A6TQH0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TQH0_ALKMQ Length = 317 Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 126/347 (36%), Positives = 201/347 (57%), Gaps = 44/347 (12%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++SSP+ + TS++ML V++A +P A +++F + LA ++A+LAEA+V K+ Sbjct: 7 VSSSPHILGEDTTSKMMLDVIIALLPATIAAMFYFRSSAAFIVALAIITAVLAEAVVQKI 66 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 RKQ V T+KD SA++TGLLLA+++P APWW+ V+G+ FA+II KQ++GG+GQN NPA Sbjct: 67 RKQPV--TIKDLSAVVTGLLLALNLPASAPWWIPVVGSAFAIIIVKQIFGGIGQNFMNPA 124 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 + +++ IS+P QMT W+ P G+D +S Sbjct: 125 LAARIMMTISWPEQMTRWVAP---------------------------------GVDSVS 151 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL K + + ++M + G +AG+ + + + GG++L+++ I I Sbjct: 152 AATPLSFVKDATAVPGNAPELMD--MLFGNIAGSMGETSAILLVLGGLYLVYRGVISIKI 209 Query: 245 PLSFLVTLALCAML--GWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 P ++ T+A+ +L G+ F T HLL G+ M+GAF++ TD + T +GR+I Sbjct: 210 PAIYIGTVAVATLLYSGFDFYFMTY-----HLLGGSLMIGAFYMATDYASGCVTPKGRMI 264 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 F G+L +IR FGGYP+GV F++L+ N P ID +T P+VYG Sbjct: 265 FAFGCGVLTTVIRLFGGYPEGVGFSILIMNSMTPFIDRFTSPKVYGE 311 >UniRef50_B8CY14 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8CY14_HALOH Length = 307 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 190/351 (54%), Gaps = 59/351 (16%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + SSP+ + ++IM V+ + VP I A +WFF L+ I + V ALL E + Sbjct: 8 VTSSPHIRDVTTVNQIMWSVVFSLVPAIVAAVWFFKINALLVISVTVVFALLTEVIFQIA 67 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 R + V T+ D SA++TG+LLA+++PP P W+ LG+V AV + KQ++GGLG NPFNPA Sbjct: 68 RGKEV--TINDGSAVITGILLALTLPPTIPLWIAALGSVVAVGLGKQVFGGLGYNPFNPA 125 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G L+ ++PV MT+W+ +DG + Sbjct: 126 LVGRAFLIAAYPVPMTTWI------------------------------------LDGQT 149 Query: 185 QATPLDTFKTSVRAGHSVEQIMQ--YPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 ATPL+ K+ + I+ + ++ G + G + LA L G V+L+++ I W Sbjct: 150 TATPLNLMKS--------DGILTDYWDLFIGHIGGCLGETSALALLLGAVYLIYKGYIDW 201 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAA--PQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 IP MLG +F L+ P HL +G +LGAF++ TD VT T GR Sbjct: 202 RIP---------AGMLGSVFVLTMLSGQDPVFHLFAGGLVLGAFYMATDMVTTPVTKMGR 252 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IFG AGL+V +IR +GGYP+GV F++LL N+TVP+++ YTRPR G K Sbjct: 253 WIFGVGAGLIVVVIRLWGGYPEGVLFSILLMNMTVPILNRYTRPRSLGEVK 303 >UniRef50_A6LW78 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW78_CLOB8 Length = 345 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/357 (33%), Positives = 191/357 (53%), Gaps = 48/357 (13%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 F +++SP+ S+IM V +A P +++FG L+ +++ + SA+ E LV Sbjct: 27 FTVSASPHIRCDESISKIMWNVNIALAPAAIFSIYYFGIPALINLVVGAASAVAFEYLVQ 86 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K RK+ + A D SA LTGLLLA+ + P P +M++ G+ A++IAK GGLG N FN Sbjct: 87 KFRKKKITAF--DGSAFLTGLLLAMCVSPTLPVYMIIAGSFVAIVIAKHSMGGLGYNIFN 144 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA IG L++S+PV MT+W + +D Sbjct: 145 PAHIGRAALMVSWPVAMTTW-------------------------------TKMTTSVDV 173 Query: 183 ISQATPLDTFKTSVRAGHS--VEQI-----MQYPIYSGILAGAGWQWVNLAWLAGGVWLL 235 +S ATPL+ K + G+S +E + ++ G G+ + + + GG +L+ Sbjct: 174 VSSATPLNILK---QQGYSKLIETFGGNTELYKAMFIGTRNGSAGETSTILLIIGGAYLI 230 Query: 236 WQKAIRWHIPLSFLVTLALCAMLGWLFSPETL--AAPQIHLLSGATMLGAFFILTDPVTA 293 ++ I+W +P+ + T+ + + W+F P L P H+++G ++GAFF+ TD VTA Sbjct: 231 YKGYIKWQVPVCMIGTVGI---ITWIFGPSGLFSGDPIFHMMAGGLIIGAFFMATDMVTA 287 Query: 294 STTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 T +G++IF AGL+ LIR GGYP+GV +++LL N PLID + +P+ +G R Sbjct: 288 PITLKGQIIFAVGAGLITSLIRLIGGYPEGVCYSLLLMNAVTPLIDRFVKPKQFGAR 344 >UniRef50_A4MZD3 Electron transport complex protein RnfD n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD3_HAEIN Length = 221 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 6/216 (2%) Query: 139 MTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRA 198 MT+W+PP + P F DA +IFSG T G ++ L IDGI+QATPLD+ K ++ Sbjct: 1 MTTWIPPINLLQEPPTFSDAFSLIFSGLTTDGFTLSQLTHNIDGITQATPLDSAKIFYKS 60 Query: 199 G---HSVEQIMQYPIY--SGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 + ++++ PI+ +G GW +N+A+LAGG++L+ ++ I W IP++ LVT Sbjct: 61 HTQLNDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRVIHWQIPVAMLVTF- 119 Query: 254 LCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWL 313 C F+ T + L+SGA M GAFFI TDPVTAS T RG++IFGAL GL V+L Sbjct: 120 FCLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYL 179 Query: 314 IRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 IR G YPDGVAFA+LL+NI VPLID+YTRPRV G+ Sbjct: 180 IRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGY 215 >UniRef50_A9BJD1 Electron transport complex, RnfABCDGE type, D subunit n=12 Tax=Thermotogaceae RepID=A9BJD1_PETMO Length = 326 Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 117/347 (33%), Positives = 192/347 (55%), Gaps = 33/347 (9%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSA-LLAEALVLKLR 65 ++P+ T +IM+ VL++ +P + A W FG+ L +L + V A +L ++V +R Sbjct: 7 AAPHFRTTNTTRKIMIDVLISLIPAVIASTWIFGFRALFIMLFSMVFAEMLDFSIVRFIR 66 Query: 66 KQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAM 125 KQ + D SA +TGLLL +++ WW ++LG V A+I+AKQ++GGLGQN FNPA+ Sbjct: 67 KQK--DHIPDFSASVTGLLLGMNLSLAVNWWQIMLGVVIAIILAKQVFGGLGQNFFNPAL 124 Query: 126 IGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQ 185 +G +LISFP MT+W P P + + V+ GI Sbjct: 125 VGRAFMLISFPTAMTTWYVPFY--YQNPDIVTSASVL-------------------GIIS 163 Query: 186 ATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIP 245 + T ++ + ++ G + G+ + LA + G ++L+ + I+ IP Sbjct: 164 EEGMST---------VLQNYTYWDMFIGTIPGSIGEVSALALIIGFIYLVIKGRIKLMIP 214 Query: 246 LSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGA 305 +S++ T+ + + + ++ P P HLL+G +LGA F+ TD VT+ T G+L+FG Sbjct: 215 VSYIGTVLIFSSVFYMVDPTKFGTPLFHLLAGGLILGALFMATDMVTSPMTKMGQLVFGV 274 Query: 306 LAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 AG+L +IR FG YP+GV+F++L+ N VPLID + +P++YG KG Sbjct: 275 GAGILTMIIRFFGSYPEGVSFSILIMNAFVPLIDDWLKPKIYGTTKG 321 >UniRef50_B0K145 Electron transport complex, RnfABCDGE type, D subunit n=36 Tax=Clostridia RepID=B0K145_THEPX Length = 335 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 121/348 (34%), Positives = 191/348 (54%), Gaps = 29/348 (8%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++SSP+ + RIML V++A P I ++ FG L IL++ S++L EAL+ KL Sbjct: 16 VSSSPHIRSNESVQRIMLDVVIALTPAIIGSVYLFGLNALKLILISVASSVLFEALIQKL 75 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 K+ + T+ D SA +TG+L+A ++P APWW+ V+G+ FA+I+ KQL+GGLG N NPA Sbjct: 76 FKKPI--TITDFSAAITGILIAFNLPASAPWWLPVIGSAFAIIVVKQLFGGLGANFMNPA 133 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 + +L+ S+PV MT++ V S ++ + D ++ Sbjct: 134 LAARAMLMTSWPVHMTNYTGTRPDVVT-----------------SATPLSIMGTRPDVVT 176 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL K G E ++ G + G + L L G V+L+ +K I W I Sbjct: 177 SATPLSIMKY----GTGAELPTLRDMFIGNIPGVIGETSALLLLIGAVYLIIRKVIDWKI 232 Query: 245 PLSFL-VTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 P+ ++ T + +LG P+ L H+L G +LGAF++ TD ++ T GR+IF Sbjct: 233 PVFYIGTTFIMLLLLG--VEPKLL---PYHILGGGLILGAFYMATDYSSSPVTPLGRIIF 287 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 AG+L +IR G YP+GV++++LL N+ PLI+ +T+P V+G K Sbjct: 288 AVGAGILTAIIRVKGAYPEGVSYSILLMNVATPLIEKFTKPNVFGKVK 335 >UniRef50_Q2LXU1 Sodium-translocating NADH-quinone reductase subunit B n=7 Tax=Bacteria RepID=Q2LXU1_SYNAS Length = 350 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 126/356 (35%), Positives = 196/356 (55%), Gaps = 35/356 (9%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++ SP+ ++ T++IM +V +P + ++ FG+ TL+ L++ +S +L EA+ KL Sbjct: 19 VSLSPHVKSRESTAKIMWMVNACLLPPLVLSVFIFGFQTLIITLISVLSCVLTEAVSQKL 78 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + + T+KD SA++TGLLLA IPP P+WM +LG +FA+ I K L+GGLG N FNPA Sbjct: 79 LHRPI--TIKDGSAVITGLLLAYVIPPGVPYWMPILGAIFAIYITKHLFGGLGFNIFNPA 136 Query: 125 MIGYVVLLISFPVQMTS-W-LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 +IG L+ +FPV MTS W LP + A+ ++ G+D Sbjct: 137 LIGRAFLVATFPVAMTSAWILPIQDFAI----------------------FKYMQPGVDA 174 Query: 183 ISQATPLDTFK----TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 +S ATPL K ++ + + + G+ G + NL L GG +L++++ Sbjct: 175 VSTATPLYVLKHYGLAALIEKYGTLSTVYKDFFLGVRPGCIGETSNLLLLLGGAFLIYKR 234 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETL--AAPQIHLLSGATMLGAFFILTDPVTASTT 296 I WHIP+S T+A +L W+F E P + +LSG LGA F+ TD VTA T Sbjct: 235 YISWHIPVS---TIASVGLLTWIFGGEGYFNGDPILAVLSGGIFLGAIFMATDYVTAPTQ 291 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +L+FG G + LIR GGYP+G+ +A+LL N P ++ + +P+ + KG Sbjct: 292 KTAQLVFGIGVGAITVLIRLKGGYPEGICYAILLMNTLTPALESWFKPKRFAPAKG 347 >UniRef50_C7RDT6 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RDT6_ANAPD Length = 325 Score = 190 bits (482), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 117/354 (33%), Positives = 201/354 (56%), Gaps = 47/354 (13%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + +SP+ + R + ML V++A +P A +++FG+ L+ IL + ++ +L+E + K Sbjct: 9 VTASPHVRSNRTVKKDMLDVIIALIPAGLASVYYFGYRALILILASVITCVLSEYIFNKA 68 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 K++ ++KD SA++TG+LLA ++P P W +V+G +FA+I+AK +GG+GQN NPA Sbjct: 69 TKRN--QSIKDLSAVVTGILLAYNVPFTLPVWQMVIGAMFAIIVAKMFFGGIGQNIVNPA 126 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 + L+ S+ MTS++PP +A + T++ + +S Sbjct: 127 LAARAFLMASWSETMTSFVPPQRVAT----------------------LKTVK-DVSMVS 163 Query: 185 QATPLD---TFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ATPL +F T ++ G + G + LA L G +L+ +K I Sbjct: 164 GATPLSDPASFST-------------MDLFLGNIPGCLGEVSALAILIGACYLIVRKVIH 210 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPL++++T + +LG +F P+ AA ++LSG +LGAFF+ TD T T +G+ Sbjct: 211 VRIPLTYILTATV--LLG-IFGPDGFAASLRNVLSGGLLLGAFFMATDYTTTPMTIKGQY 267 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH---RKG 352 +F AG+L +IR +GGYP+GV++++LL N+ VP+I+ +TRP+ +G +KG Sbjct: 268 VFAIGAGILTAIIRVWGGYPEGVSYSILLMNLVVPIIEAHTRPKTFGKVEAKKG 321 >UniRef50_Q1Q5X4 Conserved hypothetical electron transport protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5X4_9BACT Length = 343 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 125/351 (35%), Positives = 205/351 (58%), Gaps = 28/351 (7%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++SSP+ + S IM V+L+ +P A ++ FG+ L I L ++AL+ E ++ + Sbjct: 13 VSSSPHMRDNDSISHIMWTVVLSLLPAGFAAIFVFGYYVLFVIGLCCLTALVTEIVISLM 72 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 +KQ A +KD SA++T +LLA ++PP APW++ V+G+ FA+ + K +GGLG N +NPA Sbjct: 73 KKQPAFAMIKDGSAIVTAILLAYTLPPGAPWYVPVVGSFFAIAVVKHSFGGLGNNIWNPA 132 Query: 125 MIGYVVLLISFPVQMTS-WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 + L +++PV + S W + PG ++ ++ I S T G L +D + Sbjct: 133 LAARAFLQVAYPVSVNSDWR-----FFSDPGAMNVLKNITS--TGESG------LLLDAV 179 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 ++ATPL + +G + Q I G + G + +A LAGG++LL++K I+W+ Sbjct: 180 TRATPL-----AKESGAELYNFYQLLI--GSVPGCIGETSAIALLAGGLYLLYKKCIKWY 232 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAA----PQIHLLSGATMLGAFFILTDPVTASTTNRG 299 +P+++L+T+ + ++ P T+ P HL +G LGAFF+ TD VT T +G Sbjct: 233 VPVAYLLTVFVVSI---FLPPRTITPWANNPFYHLFAGGLFLGAFFMATDMVTTPLTKKG 289 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 LIF AGLL LIR + GYP+GV +++L+ N PLID +T+PR+YG + Sbjct: 290 MLIFSVGAGLLTILIRFYSGYPEGVCYSILIMNTATPLIDRFTKPRLYGSK 340 >UniRef50_B0VFN9 Electron transport complex protein rnfD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFN9_9BACT Length = 370 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 130/385 (33%), Positives = 195/385 (50%), Gaps = 59/385 (15%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 F ++ +P+ H++ T +M V+LA P + ++++G+ +L+ LL +VSA++ EA++ Sbjct: 8 FIVSPAPHFHDKTTTKNVMWNVVLALTPALIFAIYYWGFNSLLLTLLGAVSAMVTEAIIQ 67 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KLRK V T+ D SA LTG+LLA +I APWW+ VLG FA+ I KQ++GGLG NP N Sbjct: 68 KLRK--VPITVSDGSAFLTGMLLAYNINAGAPWWVPVLGAAFAIAIGKQVFGGLGNNPVN 125 Query: 123 PAMIGYVVLLISFPVQMTS-WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 PA++G L+ S+P MT+ W P SG + D N + + + Sbjct: 126 PALLGRAFLMASWPTIMTAGWAKPK-----------------SGTLSGITDPNLIAVNLQ 168 Query: 182 GIS-QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQ-----WVNLAWLAGGVWLL 235 +S +A L T T ++ ++ + G AG G+ + NL L+ L Sbjct: 169 NLSPKAYDLVTGATPLKVAQTLRD-SSFVSSLGANAGQGFDLANRIFTNLTDLSALKNLF 227 Query: 236 W------------------------QKAIRWHIPL-----SFLVTLALCAMLGWLFSPET 266 W + I W IPL F+++ L + G FSP Sbjct: 228 WGNIGGCIGEVSVFALLLGAAYLLYKNIIEWRIPLFYIGTVFVLSFFLAPLKGSGFSP-- 285 Query: 267 LAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAF 326 P H+ SG MLGAFF+ TD T T GR+IF G+L +IR +GGYP+GV + Sbjct: 286 -LLPFFHIFSGGLMLGAFFMATDYTTTPLTKSGRIIFAIGCGILTMVIRLWGGYPEGVCY 344 Query: 327 AVLLANITVPLIDYYTRPRVYGHRK 351 ++L N+ PLID T P+ +G K Sbjct: 345 SILFMNVMTPLIDKLTMPKAFGRVK 369 >UniRef50_C9XNL3 Electron transport complex protein n=9 Tax=Bacteria RepID=C9XNL3_CLODC Length = 325 Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 33/347 (9%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++SSP+ + TS IM V++A +P A ++FF L + + + E L K Sbjct: 7 VSSSPHVRSNEDTSYIMKQVIIALLPAAVAGVYFFRLNALSAMFFCILGTVGTEFLYQKF 66 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 KQ +T+ D SA++TGLLLA ++P PWWM ++G +FA+++ K ++GG+G N NPA Sbjct: 67 TKQK--STIGDFSAVVTGLLLAFNVPASLPWWMCLVGGIFAILVVKMVFGGIGCNFVNPA 124 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 + LL SFPV MT+W P +N + +D ++ Sbjct: 125 LAARAFLLASFPVAMTAWTQP--------------------------GVNWIGKNLDAVT 158 Query: 185 QATPLDTFKTSVR--AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 ATPL K A S I + G + G + + L GGV+L+++ I + Sbjct: 159 TATPLSFLKNGAAGLADLSSNGISLADMMIGNIGGCIGETSAILLLLGGVYLMYKGIINY 218 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP+ ++ T+ + L +L + L +G MLG FF+LTD T+ T +G++I Sbjct: 219 VIPVFYIATVFI---LTFLLGGFNITFAIYQLFAGGLMLGGFFMLTDYTTSPMTKKGQII 275 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 + LAGL+ +IR +GGYP+GV++++LL N PLID + R RV+G Sbjct: 276 YAVLAGLITTVIRMYGGYPEGVSYSILLVNCLAPLIDKFVRNRVFGE 322 >UniRef50_A8ZSV3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV3_DESOH Length = 337 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 121/353 (34%), Positives = 194/353 (54%), Gaps = 42/353 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLL-VLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 V + A SP+ N+ T+R M+ VL+A +P + ++ FG + Q+++ VS L AEA+ Sbjct: 19 VLQTAPSPHLSNESFTTRRMMADVLIALIPVVGMAVYVFGMFAVKQLVICLVSCLAAEAI 78 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 ++RK+ + L D SA +TG++LA+S+P APW++ V+ + A+ I K ++GGLG N Sbjct: 79 FTRMRKRPI--PLGDGSAAITGVILALSLPGPAPWYVGVIASFVAIGIGKVIFGGLGMNI 136 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+G ++I+F M + SG+ +GG + Sbjct: 137 FNPAMVGRAFVMIAFAGAMAA----------------------SGYMTAGG-------AV 167 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQ--YPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 D +SQATPL F+ E ++ + ++ G G+ + LA L GG +L ++ Sbjct: 168 DAVSQATPLTLFQQ--------EGVVTPLFKLFIGTTNGSLGEGSALACLIGGAYLCIRR 219 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 W IP ++ + +CA+L L +P++ HL GA + GAF+I TDPVT+ T+ Sbjct: 220 TASWEIPAGVILAVVVCAVLVSLANPDSEWTVLHHLFGGALLFGAFYIATDPVTSPLTSG 279 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G+ +FG G ++ L+R F GYP+GV FAVLL N PLI+ + P+ +G K Sbjct: 280 GKFVFGLGVGAIIMLLRIFSGYPEGVMFAVLLMNAMTPLINRWMIPKPFGTVK 332 >UniRef50_Q3B3R3 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B3R3_PELLD Length = 324 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 121/349 (34%), Positives = 186/349 (53%), Gaps = 38/349 (10%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +++ +P+ ++ +M V LA +P A +++FG L+ L A +++ E + + Sbjct: 7 KVSYAPFVRSKDSIESVMYNVALALLPATALSVYYFGIPALLVTLTAIAASIAFEWMTDR 66 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 +R++ + D SA++TGLLLA+++P P WMVVLG A+++ K L+GGLG N FNP Sbjct: 67 IRRKP--DSCFDGSAVVTGLLLALNVPSGLPLWMVVLGAFVAIVVTKHLFGGLGFNIFNP 124 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++ V LLISFPV MTSW P + DM T Sbjct: 125 ALVARVFLLISFPVAMTSWPVPFAV-----------------------DMQT-------- 153 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQY-PIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 A+PL KT G S Q Y G G+ + LA L G WL +++ I Sbjct: 154 -AASPLGILKTD---GLSALQGFSYMDALLGKTGGSLGETSALALLIGAAWLFYKRYITL 209 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IPL+F+ A+ + +L P T A P H+L+G +LGAFF+ TD VT+ + RG+L+ Sbjct: 210 TIPLTFIAVTAVFTGIFYLIDPSTYATPLFHILTGGLILGAFFMATDMVTSPMSMRGQLV 269 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F G+L +IR +GGYP+GV+FA+L+ N VPL+D + + ++ Sbjct: 270 FAGGCGILTAVIRLWGGYPEGVSFAILIMNSLVPLLDRWDLNDIKAKKQ 318 >UniRef50_D1N842 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N842_9BACT Length = 365 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 122/344 (35%), Positives = 186/344 (54%), Gaps = 26/344 (7%) Query: 19 RIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSA 78 RIM VLLA VP A +WFFG+ LV +++ + + AEAL KL + V T+ D SA Sbjct: 34 RIMYKVLLALVPAAIAGVWFFGFYALVVMVVTMLFCVGAEALWCKLAGKPVMGTIADGSA 93 Query: 79 LLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQ 138 +TGLLLA+++PP P W+ ++G A+ + KQ++GG+G NPFNPA++ V LLI+ P Sbjct: 94 AVTGLLLAMNLPPGVPLWVCLIGAFLAIWLGKQIFGGIGNNPFNPALVARVGLLIALPAI 153 Query: 139 MTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRA 198 MT+W P P A ++ + T +D I+ ATPL T+ + Sbjct: 154 MTTWPVPRSFDSADP----AAKITHATDTP-----------VDSITGATPLGEVGTTKKI 198 Query: 199 GHSVE-----------QIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 E M + + G G + LA L GG+ L+ K I W +P+ Sbjct: 199 LDKSEAAYANFQAVDNDAMLWKYFLGEKGGCIGETSVLALLIGGILLIALKLINWRVPVC 258 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 ++ T+A+ L F P +P H+L+G M+GAFF+ TD VT+ T+ G ++F Sbjct: 259 YIGTVAIITGLVHFFYPGVSPSPLFHILTGGLMIGAFFMATDMVTSPITSTGCVVFAVGC 318 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G++ +IR +G YP+GV+F++L N VPLID + R +G+ + Sbjct: 319 GVITSVIRLWGNYPEGVSFSILFMNALVPLIDRWCSQRPFGYVR 362 >UniRef50_C7GZP4 Na(+)-translocating NADH-quinone reductase, B subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP4_9FIRM Length = 325 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 180/336 (53%), Gaps = 38/336 (11%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++++P+ TS+IM +V+L+ VP ++ FG LV IL +++ L E + KL Sbjct: 10 MSTAPHIVTDTDTSKIMKMVILSLVPAGLVGVYVFGLKALVLILTCMIASTLFEYIYNKL 69 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 K+ T D SA LTG+L+A ++P P M ++G A+II KQLYGG+GQN NPA Sbjct: 70 MKKE--QTAWDCSAALTGMLIAYNVPSSLPIPMAIVGCFVAIIIVKQLYGGIGQNLVNPA 127 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 + +VL+ SF QMTSW P GF G T D + Sbjct: 128 ITARIVLMTSFATQMTSWPVPR----GSKGF-----SFMQGFT-------------DTTT 165 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL G + MQ ++ G + G+ + LA LAGG +LLW++ I WHI Sbjct: 166 AATPLGVLA---EGGDYMPSNMQ--LFLGNVGGSLGEVSALALLAGGAFLLWKRIITWHI 220 Query: 245 PLSFLVT-LALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 P++++VT +A+ +LG P HL +G MLGA F+ TD VT+ T G++IF Sbjct: 221 PVAYMVTVVAISLLLGQ--------DPIFHLCAGGVMLGAIFMATDYVTSPTIVSGKIIF 272 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLID 339 G A L+ +IR +G P+GV+F +LL NI P +D Sbjct: 273 GVGAALIAMVIRLYGQMPEGVSFGILLMNILTPHVD 308 >UniRef50_UPI0001C35E54 electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E54 Length = 307 Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 119/348 (34%), Positives = 187/348 (53%), Gaps = 49/348 (14%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 ++SSP+ +Q TS IML V +A +P A ++ FG + IL +S +L+E + Sbjct: 6 NVSSSPHVRDQVTTSNIMLDVAIAMIPATAYGVYQFGIKAALVILATVLSCVLSEYVYET 65 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 L + V T+ D SAL+TG++LA+++PP P W+ VLG +FA+I+ KQLYGGLGQN NP Sbjct: 66 LMGKPV--TISDGSALVTGMILALNMPPGIPLWIPVLGGIFAIIVVKQLYGGLGQNFMNP 123 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A+ LLI+F +MT++ N D + Sbjct: 124 ALAARCFLLIAFAGKMTTF-----------------------------TYN------DVV 148 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYP-IYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 TPL +++AG +V+ P ++ G + G + +A L G +LL +K I Sbjct: 149 VSPTPL----AALKAGQAVD----IPAMFIGKIPGTIGEVSVIALLIGAAYLLIKKVITI 200 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP ++L+T A+ ++F + HL G + GAFF+ TD VT+ T +G+++ Sbjct: 201 RIPAAYLITFAVFV---FIFGQQDFTYVLAHLCGGGIIFGAFFMATDYVTSPITPKGQIL 257 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 FG L G+L L R FGG +GV++A++++NI VPLI+ T P+ +G Sbjct: 258 FGILLGVLTGLFRLFGGSAEGVSYAIIISNILVPLIEKITLPKAFGKE 305 >UniRef50_B5YE56 RnfD/nqrB n=3 Tax=Bacteria RepID=B5YE56_DICT6 Length = 318 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 129/347 (37%), Positives = 199/347 (57%), Gaps = 39/347 (11%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++SSP+ TS M V+ A +P ++FFG +L+ I+++ +S++L EAL L + Sbjct: 10 VSSSPHIFTHEDTSYAMKQVIFALLPATLGGIYFFGIYSLIVIIVSVISSVLWEALALYI 69 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 R++ + LKD SA++TGLLLA+ +PP P W+ ++GT A+++AKQ++GG+G+N NPA Sbjct: 70 RRKPLT-ILKDYSAVVTGLLLALILPPNVPLWIPIIGTGVAILLAKQVFGGIGENFLNPA 128 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G LL S+P MTSW+ P +N GF + +S Sbjct: 129 LVGRAFLLSSYPQIMTSWVKP----INGLGF------------------------MSNVS 160 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL K + AG+S+ + ++ G AG + L L GG+WL+++ I W I Sbjct: 161 TATPLAIEKLKL-AGYSLPS--YWELFIGNRAGCIGETSVLLLLLGGLWLIYKNIIDWKI 217 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P+SF++T+ + + L P H+LSG LGAFF+ TD VT T++GRLIFG Sbjct: 218 PVSFILTVFIVSFL-------VGKDPIFHILSGGLFLGAFFMATDWVTTPLTSKGRLIFG 270 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 AGL +IR +G YP+GV++ +L+ N PLID +PR +G K Sbjct: 271 IGAGLFTIVIRFWGAYPEGVSYGILVMNALTPLIDNLVKPRRFGEVK 317 >UniRef50_B2A143 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A143_NATTJ Length = 315 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 113/346 (32%), Positives = 176/346 (50%), Gaps = 43/346 (12%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++SSP+ + IM VL+A +P +W FGW +++ + +A+ +++ E+L++ Sbjct: 7 VSSSPHLRSPETIDSIMRDVLIALIPPFIVSIWLFGWTSIIVVAVATAVSMITESLIV-- 64 Query: 65 RKQSVAATLK-DNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 K LK D SA +TG++ +S+PP PWW+V G A+ IAKQ++GG+G N FNP Sbjct: 65 HKSLAPRKLKGDLSAAVTGVIFGLSLPPGTPWWVVASGAFVAIFIAKQIFGGIGYNIFNP 124 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G +++++P +T W P E +D Sbjct: 125 ALVGRAFVVVAWPSYLTHWTEPFE-------------------------------PVDAA 153 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 S+ATPL + G E + ++ G +AG+ + LA GG++LL + I + Sbjct: 154 SRATPLAF--PGMTEGSPFEIVPFTDLFVGTIAGSLGETSALAITIGGIFLLIRGHIDFR 211 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 +PL FL LAL + HL+SG+ GA FI T VT+ T G+LIF Sbjct: 212 VPLGFLGALALVVSIAG-------ENALFHLVSGSAFFGAIFIATCMVTSPYTKTGKLIF 264 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G G + ++R + P GV +AVLL N VP I+ YT+PRVYG Sbjct: 265 GIGCGAITAILRMYAAIPAGVTYAVLLMNALVPFINVYTKPRVYGE 310 >UniRef50_C0WAW4 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAW4_9FIRM Length = 336 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 115/357 (32%), Positives = 189/357 (52%), Gaps = 51/357 (14%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + SSP+ H + M V+LA VP I A +++F + ++ VSA++ E + K+ Sbjct: 13 VTSSPHMHCGLTIGKSMREVMLALVPAIIASVYYFRMSAAIVMVTCVVSAIVFETICNKV 72 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + T++D SA LTGLLLA+ +P P +G++FA+++ K ++GGLG N FNPA Sbjct: 73 MHKP--NTVQDGSAALTGLLLAMCLPASMPPLFAAMGSMFAIVVGKAVFGGLGCNIFNPA 130 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 IG +LL SFP QMT+W+ P A + D +S Sbjct: 131 HIGRAILLASFPQQMTNWVLPATAAAS-----------------------------DAVS 161 Query: 185 QATPLDTFKTSVR--------AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLW 236 ATPL + + + + + +M ++ G + G+ + A + GG++L++ Sbjct: 162 TATPLAVMRATEKIWQAGGAASAAKLPDLMN--LFWGNVGGSLGETCVPALVLGGLYLIY 219 Query: 237 QKAIRWHIPLSFLVTLALC-----AMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPV 291 +K I W IP+ +LVT+A+ A++G+ P T P HL +G M+GAFF+ TD V Sbjct: 220 KKLIDWRIPVFYLVTVAILTGVYGAVMGY---PSTF--PLYHLFAGGLMIGAFFMATDWV 274 Query: 292 TASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 T+ T +G++I+ G+L LIR G Y +GV +++L+ N+ P+ID + R +G Sbjct: 275 TSPITKKGKIIYAIGLGVLTSLIRLRGSYTEGVCYSILMMNMVTPMIDRFVRNVSFG 331 >UniRef50_A9KRW8 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Clostridiales RepID=A9KRW8_CLOPH Length = 336 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 119/355 (33%), Positives = 191/355 (53%), Gaps = 38/355 (10%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++ +++SP+ + T++IM V +A +P ++ FG+ + +L++ S +++E L Sbjct: 4 MYNVSASPHVRSGVTTAQIMRDVAIALMPACLFGIYQFGFSAFLVLLVSVTSCVVSEFLY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 +L K + SAL+TGLL+ +++P P W+ ++G VFA+I+ KQLYGGLGQN Sbjct: 64 ERLMKHPYRP--YECSALVTGLLIGMNMPATIPVWIPMVGGVFAIIVVKQLYGGLGQNFM 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRL--- 178 NPA+ L I F +MT++ +DA T SG TL L Sbjct: 122 NPALAARCFLSICFTSRMTTFA------------VDAF-------TNSGTSSRTLYLFNY 162 Query: 179 ---GIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLL 235 G+DG+S ATPL K S A ++ M + + G++ + + L G +LL Sbjct: 163 GYAGLDGVSGATPLAAMKASEAAPSLLD--MFFGFHGGVIG----ETSAMMLLIGACYLL 216 Query: 236 WQKAIRWHIPLSFLVTLALCAML--GWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTA 293 +++ I IPL+++ T A+ +L G F E + A +L G +LGAFF+ TD VT Sbjct: 217 YRRIISLRIPLTYIATFAVFIILFSGKGFDVEYVLA---QILGGGLILGAFFMATDYVTC 273 Query: 294 STTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 T G+++FG G L L R FGG +GV++A++ N+ VPLI+ T PR +G Sbjct: 274 PITKYGQILFGVCLGALTGLFRVFGGSAEGVSYAIIFCNLLVPLIEKITMPRGFG 328 >UniRef50_C1QFU9 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Brachyspira RepID=C1QFU9_9SPIR Length = 361 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 116/358 (32%), Positives = 200/358 (55%), Gaps = 15/358 (4%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F SSP+ + T++IML V++A +P + + FG +V L A ++ +++ + Sbjct: 1 MKFYTESSPHIKDGDTTNKIMLRVIIALLPAVIYSIVLFGARVIVLYLAAIITCIVSTII 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 V K+RK+ + + D + +T +LL +++PP A MVV+G+V A++ AK+++GGLG N Sbjct: 61 VKKVRKKPL---IPDYAVTVTAILLVMTLPPSATITMVVIGSVIAIVFAKEVFGGLGSNI 117 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPA++G L ++FP QMT + PP N+P F+ + I T + + + Sbjct: 118 FNPALVGRAFLQVAFPAQMTMYTPPK----NVP-FLGVFENILKDFTLTVSGASQSLDAV 172 Query: 181 DGISQATPLDTFK-TSVRAGHSVEQIMQYPIYS------GILAGAGWQWVNLAWLAGGVW 233 ++ ATPL K S+ G ++ +Q + G AGA + L L GG++ Sbjct: 173 SALTSATPLTFLKYNSIDFGGTLASQIQVESHYYLQMLLGSTAGAIGETSFLLLLIGGIF 232 Query: 234 LLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTA 293 LL I W IPL ++L + + L L P +A+P +L+G LGAFF+ TD VT+ Sbjct: 233 LLITNTIDWRIPLGMFISLVVVSFLLCLAMPGKVASPIYQVLAGGFGLGAFFMATDMVTS 292 Query: 294 STTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +++ G I+ L G ++ ++R+FG P+ + +++L+ N+ +PLI TRP +G ++ Sbjct: 293 PSSHLGAWIYALLIGAVLAILRTFGSSPEYMMYSILIGNMFMPLIAMLTRPLPFGKKE 350 >UniRef50_B3EJT7 Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Chlorobiaceae RepID=B3EJT7_CHLPB Length = 331 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 121/337 (35%), Positives = 187/337 (55%), Gaps = 31/337 (9%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +++++P+ ++ +M V LA P ++ FG LV ++ +S + E L+ K Sbjct: 7 KVSNAPFVRSKDSIESVMYNVALALAPATVMSVYLFGMRALVLTVVCILSCIAFEWLMDK 66 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 R + + D SAL+TGLLLA+++P P WMVV G+ A++ K ++GGLG N FNP Sbjct: 67 ARNKPNSCL--DGSALVTGLLLALNVPANLPLWMVVTGSFIAIVATKHVFGGLGYNVFNP 124 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++ V LLISFP MTSW P + + + +D Sbjct: 125 ALVARVFLLISFPAAMTSWPMPAPFSFD--------------------------MMVDME 158 Query: 184 SQATPLDTFKTS-VRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + A+PL KT V+A + +M + G + G+ + LA LAG VWL ++K I Sbjct: 159 TGASPLGILKTDGVQAALASLSLMDG--FYGTMTGSLGETSALALLAGAVWLWYKKYITM 216 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 +IPL+ + ++ L L L P T A+P H+++G +LGAFF+ TD VT+ + RG+L+ Sbjct: 217 YIPLTIMGSVFLFTGLFHLIDPGTYASPAFHMVTGGLILGAFFMATDMVTSPLSIRGQLL 276 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLID 339 FG GLL +IR +GGYP+G++FA+L+ N VPLID Sbjct: 277 FGLGCGLLTAVIRLWGGYPEGISFAILIMNSFVPLID 313 >UniRef50_Q0TQI7 Electron transport complex, RnfABCDGE type, D subunit n=14 Tax=Bacteria RepID=Q0TQI7_CLOP1 Length = 326 Score = 173 bits (439), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 115/349 (32%), Positives = 191/349 (54%), Gaps = 48/349 (13%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + SSP+ ++ T IM VL+A +P + FG + I ++SA+++E K+ Sbjct: 24 VDSSPHIKDKLSTQSIMRDVLIALIPTSLVGVLVFGLRAIFIIATCAISAVISEYAFQKI 83 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 K+ + T+KD SA++TG+LLA+++P P W+ +G++ A+++ KQ++GG+G N NPA Sbjct: 84 TKKEI--TIKDLSAIVTGVLLALNLPINTPLWVACIGSIVAIVLVKQIFGGIGCNFMNPA 141 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 + LL ++P ++ IF+ +DG++ Sbjct: 142 LAARAFLLAAWPESIS---------------------IFT---------------LDGVT 165 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL K S+ + G +AG + +LA L G ++LL++K I WHI Sbjct: 166 TATPLALLKNGQGNLPSLSNA-----FLGNIAGCIGEVSSLAILIGALYLLYRKVITWHI 220 Query: 245 PLSFLVT-LALCAMLGWLFSPETLAAPQIH-LLSGATMLGAFFILTDPVTASTTNRGRLI 302 PL ++ T L L ++G L+ I+ + +G LGAFF+ TD VT+ T +G++I Sbjct: 221 PLVYIGTVLILTTVIG---RNGFLSGNGIYEIFTGGLFLGAFFMATDYVTSPLTKKGQII 277 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F GL+ LIR FGGYP+GV++++LL N+ VP+IDYY +P+ +G+ K Sbjct: 278 FAFGCGLITTLIRIFGGYPEGVSYSILLMNLLVPVIDYYIKPKAFGNEK 326 >UniRef50_B0PD31 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0PD31_9FIRM Length = 320 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 110/344 (31%), Positives = 178/344 (51%), Gaps = 45/344 (13%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 I SP+ + T +IML V +A +P + A +WFFG L + V ++L E L K+ Sbjct: 15 ITPSPHVKDGISTRKIMLTVSVALMPSLIAAIWFFGLRALALTAVCVVFSVLFEYLFNKV 74 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 K+ T+ D SA++TG++L+ ++P P+WM G+ A+++ K L+GG+G N NPA Sbjct: 75 TKRE--QTIGDCSAVVTGIILSFNLPVTLPFWMAAFGSFMAIVVVKCLFGGIGCNFANPA 132 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 V LL+SF QMT+W+ P G+D ++ Sbjct: 133 ATARVFLLVSFGGQMTTWVAPR--------------------------------GVDAMA 160 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL T + G + + + G G+ + +A + GGV+L+W+ I W I Sbjct: 161 TATPL----TLISTGQTDALPSLWQMLIGQRGGSMGETCAIALIIGGVFLIWRGIIGWEI 216 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P++ + ++ + A+ LF + P +LSG M+ AFF+ TD T+ T +G+++F Sbjct: 217 PVTLIASIFVFAL---LFGQD----PFYAILSGGVMIAAFFMATDYSTSPVTTKGKVVFA 269 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 G + +IRSF YP+G++FA+LL NI P ID T + +G Sbjct: 270 IGIGFITMVIRSFCNYPEGMSFAILLMNILTPHIDSLTITKPFG 313 >UniRef50_Q52715 Electron transport complex protein rnfD n=1 Tax=Rhodobacter capsulatus RepID=RNFD_RHOCA Length = 358 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 112/315 (35%), Positives = 172/315 (54%), Gaps = 21/315 (6%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 + P+TH SR ML V+ A P LW FGW + L VSA + E LK+ Sbjct: 6 AGPHTHTLFTVSRTMLTVVAALTPATLFGLWEFGWPAIFLFLTTVVSAWVFEVACLKIAD 65 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + + D SA+L+G L+A+++PP APWW+ V+G+ A++IAK L+GGLGQN FNPAM+ Sbjct: 66 KPIRPFATDGSAILSGWLVAMTLPPYAPWWVGVIGSFIAIVIAKHLFGGLGQNLFNPAMV 125 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 +L+++ PVQMT+W+ P + + P F+ + + F G D +S A Sbjct: 126 ARAMLVVALPVQMTTWIAPVGL-LEGPSFLHGLSITFLGSQE-----------FDAVSSA 173 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYS-------GILAGAGWQWVNLAWLAGGVWLLWQKA 239 + L K+ + AG ++ +I+ P + G + G+ + + GG+ LL + Sbjct: 174 STLSHIKSQISAGATMGEIL--PTLADLESRLLGFVPGSLGETSTVLLALGGLLLLVTRI 231 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I IPL+ L TL + + +P+ A P +HL SG+TML AFFI TD VT+ T G Sbjct: 232 ITPTIPLAVLGTLVTLSAICSFLAPDRFAPPILHLTSGSTMLCAFFIATDYVTSPVTTAG 291 Query: 300 RLIFGALAGLLVWLI 314 + ++G G LV++I Sbjct: 292 KWVYGIGIGTLVFVI 306 >UniRef50_A5EVI1 Electron transport complex protein, D subunit n=2 Tax=Cardiobacteriaceae RepID=A5EVI1_DICNV Length = 317 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 125/341 (36%), Positives = 175/341 (51%), Gaps = 39/341 (11%) Query: 9 PYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQS 68 P + T+ +M V+LA +P I + F G + ILLA +SA EAL+L+LR ++ Sbjct: 10 PVDYFAPTTAYVMWSVVLALMPAIVVLVIFSGSRWIGLILLAILSAWFFEALILRLRGKA 69 Query: 69 VAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGY 128 V LKD +A LT LLL +S+P P W+V++G FA+I AK LYGG+G NPFNPAM+G+ Sbjct: 70 VLPHLKDGTATLTALLLVLSLPVTVPAWLVIIGVGFALIFAKHLYGGMGMNPFNPAMVGF 129 Query: 129 VVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATP 188 LL+SFP M H + ++ D + AT Sbjct: 130 AFLLVSFPAAMGQ------------------------HASLSVPPSSFWQTFDTTTAATL 165 Query: 189 LDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWL----AGGVWLLWQKAIRWHI 244 LD + S+ I P W WL GG +LL ++ + + Sbjct: 166 LDYSRQLRIDDASLTAITWLP-----------SWQRFFWLLAVALGGCYLLKKRLLDARL 214 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P++ L++ L A L W + P L SGAT GA+FI TDPVTA+ T GR ++G Sbjct: 215 PIAVLLSALLTATLFWFIDADRYLNPAAQLFSGATFFGAWFIATDPVTAAATPFGRYLYG 274 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPR 345 ++ G+L IR+ G +PDG AFAVL AN VP++DY RP Sbjct: 275 SIIGVLTVCIRNLGNFPDGFAFAVLCANALVPVLDYVFRPH 315 >UniRef50_UPI0001BC5C0E Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Fusobacterium RepID=UPI0001BC5C0E Length = 317 Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 104/350 (29%), Positives = 180/350 (51%), Gaps = 41/350 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ SP+ +M V++A +P ++ FG ++ +A ++ L+ E + Sbjct: 4 ILKMGPSPHIRTSETVESVMYDVIIALIPAFLIAVYVFGLRAIIVTGVAVLTCLVTEYIC 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ KQ + ++ D SA+LTG+L + IP + P V++G + A+ + K +YGGLG N F Sbjct: 64 QKIMKQDI--SIFDGSAVLTGILFSFVIPVIMPLPYVIIGCIIAIALGKMVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + S+PV +T++ + G T G M +D Sbjct: 122 NPALVGRAFVQASWPVAITTFA-------------------YDGRT--GATM------LD 154 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + + ++T + ++ ++ G + G + LA + GG +L+++K I Sbjct: 155 AMKRGLDINTVLIANSGNLYLDALI------GKMGGCLGETSALALILGGCYLIYKKQID 208 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W +P + T+ + + W A P + +LSG MLGAFF+ TD VT+ T++GR+ Sbjct: 209 WKVPAVMIGTVFV---MTWAMGA---ADPIMQILSGGLMLGAFFMATDMVTSPHTDKGRV 262 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +F G LV IR GGYP+G A+A+L+ N VPLI+ Y RP+ +G K Sbjct: 263 VFAFGIGFLVSCIRMKGGYPEGTAYAILIMNGVVPLINRYIRPKKFGEVK 312 >UniRef50_A7C2T7 Electron transport complex, NQR2 and RnfD n=2 Tax=Beggiatoa RepID=A7C2T7_9GAMM Length = 336 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 126/354 (35%), Positives = 194/354 (54%), Gaps = 40/354 (11%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + +SP+ T +ML V+ A +P A LWFFG L+ +LLAS++ L Sbjct: 10 VQASPFLKQGLTTQNVMLDVIYALIPVTLASLWFFGMSALM-VLLASIAGTLFTEWFFS- 67 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + A +LKD SA LTGLLL +++PP P WM LG V A+ + K ++GGLG N FNPA Sbjct: 68 SSPNRAESLKDGSAFLTGLLLGLTLPPSLPLWMAFLGGVVAIGLGKIVWGGLGNNLFNPA 127 Query: 125 MIGYVVLLISFPVQMTSW---------LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNT 175 ++G LL +FP MT+W L PH +++ + Sbjct: 128 LVGRAFLLANFPNAMTTWTAQSTSLFELHPHNLSLPL----------------------- 164 Query: 176 LRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLL 235 + G+D ++ ATPL K + ++ I+ G +G+ + L L GG++L+ Sbjct: 165 FQTGVDAVTSATPLGLMKFQQQDTPLLDLII------GTTSGSFGETGGLLILLGGIYLI 218 Query: 236 WQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTAST 295 +++I W IP + L ++ + + + ++F P + SG +LG FF+ +DPVT+ Sbjct: 219 LRRSIDWRIPAAILGSVIIFSGILFMFDATRYPDPFFAVFSGGLLLGTFFMASDPVTSPL 278 Query: 296 TNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 T +G IFG G++V LIR+FGG+P+GV +A+LL N TVPLI+ YT+PRV+GH Sbjct: 279 TPKGAWIFGIGIGVIVVLIRNFGGFPEGVMYAILLMNATVPLIERYTQPRVFGH 332 >UniRef50_Q315L3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Desulfovibrionales RepID=Q315L3_DESDG Length = 319 Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 119/351 (33%), Positives = 189/351 (53%), Gaps = 50/351 (14%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + ++P+ H R +M L+A +P +A ++ +G L + L+ V+A++ EA+ LK Sbjct: 14 VGAAPHWHCGRTIHGMMRDYLIALMPAVAMAVYMYGLDALRVMALSCVTAVVIEAVCLKA 73 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 ++ V T+ DNSALL GLLLA +P APWW+V+LG+ F +++ + ++GGLG NP Sbjct: 74 MERDV--TVDDNSALLQGLLLAFLLPASAPWWLVILGSAFTILLGRLVFGGLGANPVCAP 131 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G+ +L IS+ ++M IDA +NT+ ++ Sbjct: 132 LVGWAILSISWKLEMD---------------IDAAM------------LNTML-----VN 159 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA-----GWQWVNLAWLAGGVWLLWQKA 239 T L F A S Y+G+LAG G V A L GG++LL ++ Sbjct: 160 PLTQLKYFGAQKVADIS---------YTGLLAGQQLGALGSSQVG-ALLLGGIYLLVRRT 209 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 +RW +P +F + L + + + A+P HLL+G+ + GAFF++TD ++ Sbjct: 210 VRWQLPAAFFGGVLLISGIFYAIDSSQYASPLFHLLTGSVVFGAFFLVTDSSSSPVGKAA 269 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +IFG LAG +V IR +G YPDGV FA+LLAN+T PL+D RP+ +G R Sbjct: 270 MVIFGLLAGGMVVTIRVYGMYPDGVPFAILLANMTSPLLD-MIRPKPFGAR 319 >UniRef50_C6BZS9 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS9_DESAD Length = 323 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 44/350 (12%) Query: 4 RIASSPYTH--NQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 R+ SP H ++R ++M LLA VP + FG L + +A +A+LAE L Sbjct: 15 RLTVSPAPHWRSKRTVEKMMQSHLLALVPALLMAFNMFGLPALATVGIAGTAAVLAEVLC 74 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 LK++ + V + + +AL GLL +P APWW+V G V +++ + ++GG G NP Sbjct: 75 LKMQNRDV--NVDNYTALYEGLLFVFLLPAGAPWWLVASGAVLTIVLGRTVFGGFGSNPI 132 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRL-GI 180 ++ + +S+P M +I N+ H ++ L+ G+ Sbjct: 133 CAPLVAWAFCRLSWPAAM-------DIDANL------------AHFMINAPLDQLKFFGL 173 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D + Q D F G QI LA LAGG++L+ + Sbjct: 174 DTLEQFNYTDLFLGKQLGGLGASQI-------------------LAVLAGGIFLIATGWV 214 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 R IP +FLV + + A + W+ PE A P HLL+G+ M GAFF+ D ++ + Sbjct: 215 RVFIPAAFLVGVTVTASIFWMIDPEVYANPLFHLLTGSVMFGAFFLAPDVASSPVGMIPQ 274 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++FG +AG +V +IR +G YPDGV FA+++AN+ PL+D RP+ +G + Sbjct: 275 ILFGLIAGTMVIIIRVYGIYPDGVPFAIMVANLLTPLLD-RVRPKPFGGK 323 >UniRef50_C6L9Q2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9Q2_9FIRM Length = 497 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 175/332 (52%), Gaps = 47/332 (14%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M V LA +P A ++ FG L + ++ ALL+E + KL Q V T+ D SAL+ Sbjct: 1 MYNVALALLPATAFGVYRFGLYALAIVAVSVAFALLSEYVFQKLAGQKV--TVSDGSALV 58 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TGLLL +++PP P W+ LG++FAVI KQ +GG+GQN NPA+ LLISF M+ Sbjct: 59 TGLLLGLNLPPTVPLWIPALGSIFAVIFVKQFFGGIGQNFMNPALGARCFLLISFTGIMS 118 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 + +DGIS ATPL Sbjct: 119 DY------------------------------------AVDGISGATPLAALAEG----- 137 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 +Q+ ++ G G + LA L GG++LL +K I W IP+ +LV+ A+ ++ Sbjct: 138 --QQVNLAQLFIGFTGGCIGEISTLAILIGGIYLLLKKIITWEIPVCYLVSFAIFELIFG 195 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 S T Q L SG MLGAFF+ TD VT+ T +G++++G L G+L ++R+FG Sbjct: 196 KGSGITFVLAQ--LCSGGLMLGAFFMATDYVTSPITKKGKIVYGILLGVLTGVLRTFGAL 253 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 P+GV++A++++N+ VPLI+ T P +G+ G Sbjct: 254 PEGVSYAIIISNLLVPLIEKVTMPTAFGYENG 285 >UniRef50_Q73PG2 Na(+)-translocating NADH-quinone reductase, B subunit n=2 Tax=Treponema RepID=Q73PG2_TREDE Length = 338 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 112/358 (31%), Positives = 181/358 (50%), Gaps = 51/358 (14%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++ +P+ +T +ML V++A +P A ++ F LV+I+++ + + E+L K+ Sbjct: 11 MSPAPHVVTPVKTQTLMLDVIIALLPLTAYGIYLFSIPALVRIIVSVLCCVGFESLFRKI 70 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + + +KD SA++TGLLLA+ IPP P WM++LG FA+++AK+ +GGLG N FNPA Sbjct: 71 CRLDI--RVKDLSAVITGLLLALVIPPNLPIWMLILGCFFAIVVAKEFFGGLGANVFNPA 128 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G + SF MTSW+ P IF D +S Sbjct: 129 LVGRAFMFASFSGAMTSWIQPG-------------NSIF-----------------DAVS 158 Query: 185 QATPLDTFKTSVRAGHSVEQIMQ-------YPIYSGIL----AGAGWQWVNLAWLAGGVW 233 ATPL S +I + +Y+ ++ AG + L L G + Sbjct: 159 TATPLKLINAKEGIALSASEIAKTLNLSSSTDLYTQLILGNHAGCIGETSILLILLGFAY 218 Query: 234 LLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTA 293 LL++K I W P++ ++T + + + P + L SG GA F+ TD VT+ Sbjct: 219 LLFKKVIDWKTPVTMMLTAVVITSIAGI-------NPILTLTSGGLAFGAVFMATDYVTS 271 Query: 294 STTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 T +G+L+FGA GL+ LIR F G P+GV +++L+ N VP ++ P YG+ K Sbjct: 272 PVTPKGKLLFGAGCGLITGLIRLFSGMPEGVMYSILIMNAVVPFLNKII-PVKYGYVK 328 >UniRef50_D2RN95 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RN95_ACIFE Length = 344 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 122/354 (34%), Positives = 190/354 (53%), Gaps = 37/354 (10%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL---V 61 ++SSP+ H S+ M V+LA VP + A +++F + I+ +SA++ E L V Sbjct: 13 VSSSPHMHCGLTISKSMREVILALVPAVLASVYYFRVDAVRVIVCCVLSAIIFEKLANKV 72 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + ++K T+KD SA LTGLLLA+ +P P +M VLG +FAV+I K ++GGLG+N F Sbjct: 73 MGVKKD----TVKDGSAALTGLLLALCLPASLPSYMAVLGGMFAVVIGKAIFGGLGKNIF 128 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTL--RLG 179 NPA IG +LL SFP QMT+W+ P A + + + M + G Sbjct: 129 NPAHIGRAILLASFPQQMTTWVIPATKAAAVTAATAGADATTAATPLAVMRMTEKVWQAG 188 Query: 180 IDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 SQ PL ++ G + G+ + A + GG++L+W+K Sbjct: 189 GAAASQLPPLSD------------------LFMGNVGGSLGETCVPALVLGGLYLIWKKL 230 Query: 240 IRWHIPLSFLVTLALC-----AMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTAS 294 I W IP+ +L T+A+ A++G+ P T P HL +G M+GAFF+ TD VT+ Sbjct: 231 IDWRIPVFYLATVAVLTGIYGAVMGY---PSTF--PLYHLFAGGLMIGAFFMATDWVTSP 285 Query: 295 TTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 T +G++I+ G+L LIR G Y +GV +++L+ N+ P+ID + R +G Sbjct: 286 ITKKGKIIYAIGLGVLTSLIRLRGSYTEGVCYSILMMNMVTPMIDRFVRNVSFG 339 >UniRef50_A5TRQ5 NADH dehydrogenase (Ubiquinone), RnfD subunit n=8 Tax=Fusobacterium RepID=A5TRQ5_FUSNP Length = 314 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 47/349 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + + +P+ +M V++A +P A ++ FG L+ ++ ++ +L E L Sbjct: 4 ILKTGPAPHIRTAETVESVMYDVIIALIPAFAMAVYTFGVRALILTAVSVLTCILTEYLC 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K K+ + A D SA+LTG+L A +P + P VV+G + A+ + K +YGGLG N F Sbjct: 64 QKALKRDIEAF--DGSAILTGILFAFVVPAIMPLQYVVVGNIVAITLGKMVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + S+PV +T++ D Sbjct: 122 NPALVGRAFVQASWPVAITTF------------------------------------AFD 145 Query: 182 GISQATPLDTFKTSVRAGHSV-EQIMQY-PIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 G + AT LD K + ++ E QY + G + G + +LA L GG +L+++K Sbjct: 146 GKAGATVLDAMKRGIPLSDALLENTNQYIDAFLGQMGGCLGETSSLALLLGGAYLIYKKH 205 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I W +P V + +L W A P + + SG LGAFF+ TD VT+ TT++G Sbjct: 206 IDWKVPA---VMIGTVFVLTWAMG----ADPLMQIFSGGLFLGAFFMATDMVTSPTTSKG 258 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 R++F G+L+ LIR GGYP+G A+A+L+ N VPLID Y RP+ +G Sbjct: 259 RVVFALGLGILISLIRMKGGYPEGTAYAILIMNGVVPLIDRYIRPKKFG 307 >UniRef50_B5JR41 Electron transport complex, RnfABCDGE type, D subunit subfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR41_9BACT Length = 344 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 117/354 (33%), Positives = 176/354 (49%), Gaps = 18/354 (5%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 ++ +SPY IM V+ A +P ++ FG L +++ + LL E V Sbjct: 2 QLHTSPYLRPSASVEVIMRNVVYALLPICMFSVYQFGISVLALVIVCVGACLLTEHFVCL 61 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + +T D S ++TGLLLA+++PP P WM + ++ V + K +GGLG N NP Sbjct: 62 CSSKP--STTNDWSVVITGLLLALTLPPGFPLWMAAVASIVGVAVGKLFFGGLGYNVMNP 119 Query: 124 AMIGYVVLLISFPVQMTSWLP---PHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 A++G +F V MT+W+P + IP + + + TA N I Sbjct: 120 ALVGRAFAQAAFTVPMTTWVPYLSENRFTEFIPSSLT-LPFLRPIPTADWVAEN----AI 174 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DG + ATPL K S++ ++ G AG+ + L L G +L+ ++ + Sbjct: 175 DGFAGATPLALMKFEQVPTDSIQMLL------GTTAGSSGETSALLILLCGAYLVMRRMM 228 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W I S L+T A + +L +PE P L SG MLGA F+ TD V + T G Sbjct: 229 NWRITASVLLTAAATSGAFYLLNPEIYPDPLFTLCSGGLMLGAVFMATDMVASPVTPWGI 288 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG--HRKG 352 I+GA G + +IR FGG P+GV +A+LLAN PLI T+P++YG RKG Sbjct: 289 WIYGAFIGFVTVIIRLFGGLPEGVMYAILLANAASPLISAATQPKIYGAVKRKG 342 >UniRef50_A1WUZ1 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUZ1_HALHL Length = 314 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 128/333 (38%), Positives = 175/333 (52%), Gaps = 42/333 (12%) Query: 24 VLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGL 83 VLLA +PG +W FG G L+ I A + + AEA L+LR + VA L D S L L Sbjct: 4 VLLALLPGAGVLVWLFGVGVLLNITAALTAGVAAEAAALRLRGRPVAPALTDGSTPLAAL 63 Query: 84 LLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWL 143 ++ +++PPL P+W+ L AV++ KQ+YGGLGQN FNPAM+GY+ ++++FP ++ W Sbjct: 64 IIGIALPPLLPFWIPALAGALAVLLGKQVYGGLGQNIFNPAMVGYLAVVLAFPQAVSLWP 123 Query: 144 PPHE-IAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSV 202 P + +P +A+ +G L D ++ ATPLD T A Sbjct: 124 APETGVGAAVPA-TEALHYFLTG---------ALPPIADAMTHATPLDRLATEGFAA--- 170 Query: 203 EQIMQYPIYSGILAGAGWQW-----------VNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 L G G W + A L GG LL + + W +P+ LV Sbjct: 171 ------------LPGDGGLWGQTQAAGAWLWLGAALLLGGAGLLALRIVDWRLPVGVLVG 218 Query: 252 LALCAMLGWLFSPETLAAPQI-HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLL 310 A A L L AP + HLLSGAT+L AFFI TDPV+A RLI+ AL G++ Sbjct: 219 TAATAALLQLGD----GAPVLFHLLSGATLLVAFFIATDPVSAPREPTARLIYAALIGVV 274 Query: 311 VWLIRSFGGYPDGVAFAVLLANITVPLIDYYTR 343 +IR GG+PDG AFAVL+ N T PL+DY R Sbjct: 275 ALVIRELGGHPDGFAFAVLMLNATAPLLDYVVR 307 >UniRef50_B6WV80 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV80_9DELT Length = 319 Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 116/348 (33%), Positives = 176/348 (50%), Gaps = 43/348 (12%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 +++ PY H R R L+ L A +P + +W +G + + L A+L EA KL Sbjct: 13 MSAPPYWHCGRTVRRQSLMTLAALLPAVIGAVWTWGLPAVRVMSLCVAVAVLTEAACQKL 72 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + +A + D +A+ +GLLL+ +P APWW+ V+ + A+ + K +GGLG NP N + Sbjct: 73 MGRELA--IDDYTAVCSGLLLSFMLPADAPWWIAVMAPLIAISLGKMAFGGLGANPVNTS 130 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDA-IQVIFSGHTASGG-DMNTLRLGIDG 182 ++G+ VL +SFP+ M P+ + +N +D +++ F G +G + L LG Sbjct: 131 VVGWAVLFVSFPLFME----PNAVQLNAASMVDPLVRLKFFGWADAGRIPLQDLLLG--- 183 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +QI G G V +L GG L + IRW Sbjct: 184 --------------------QQI----------NGLGAGQVGALFL-GGSLLAARGIIRW 212 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 I L F +A A L ++ SP T A+P HL +G+ MLG FF++TDP A + + Sbjct: 213 QIALGFFAGVAGLAALFYMNSPATDASPLFHLCTGSVMLGGFFLITDPANAPSRPLPMFL 272 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +G L G LV IR +G Y DGV FA+LLAN+ PL+D RP+ +G R Sbjct: 273 YGLLGGALVMTIRKYGIYLDGVPFAILLANLVAPLLD-SIRPKPFGVR 319 >UniRef50_A1WT47 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT47_HALHL Length = 338 Score = 157 bits (396), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 119/348 (34%), Positives = 185/348 (53%), Gaps = 18/348 (5%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 I +SP+ RIM V+LA +P A ++ FG +++++V+A+L E L + Sbjct: 6 EIKTSPHIKAPDSVERIMRSVVLALLPVCAFSVYQFGISVAALLVVSTVTAVLTEQLFNR 65 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + + +T+ D SA++TGLLLA+++PP P WM + A+ + K L+GGLG NPFNP Sbjct: 66 MSGRP--STIGDYSAVITGLLLALTLPPAFPLWMAAVSAFVAIALGKALFGGLGYNPFNP 123 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G +FP ++W G + A+ T +D Sbjct: 124 ALLGRAFAAAAFPEASSTW--------TQAGLSERFTEFLPSTLAAP---FTTPASVDAY 172 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 + ATPL +K G + E + + +G +AG+ + L LA G++L+ + A+ W Sbjct: 173 TTATPLAEWK--FEGGIATET---WDLLAGTIAGSAGETSALLVLACGLFLVLRGAVNWR 227 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 +P+S L + A A + + P T P L SGA MLGAFF+ +D ++ T G I+ Sbjct: 228 VPVSVLGSAAATAGVFYALDPATYPDPLFVLASGALMLGAFFMASDMSSSPVTPAGIWIY 287 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G L G L +IR FGG P+GV +A+LL N VPLI+ +PR+YG RK Sbjct: 288 GILIGFLTVIIRFFGGLPEGVMYAILLGNAAVPLIERIAQPRMYGLRK 335 >UniRef50_D1U4Y0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4Y0_9DELT Length = 334 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 115/348 (33%), Positives = 174/348 (50%), Gaps = 42/348 (12%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ +P+ H R M L+A +P FFG + + +A A+ EAL Sbjct: 8 ILTVSMAPHVHCGRTIKGHMRETLIALLPATIMAAVFFGLDAVRVMAMACAVAVATEALC 67 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L ++ +A + D SALLTGLL A +P APWW+ +G ++ + K ++GGLG +P Sbjct: 68 NTLSRRDLA--VDDLSALLTGLLFAFLLPASAPWWLAAVGAAASIGLGKFIFGGLGASPL 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLR-LGI 180 P ++G+ + IS+P M D + + A+ ++ L+ G+ Sbjct: 126 CPPLVGWALCRISWPEIM-----------------DTNASMLASTLAA--PLHELKHFGL 166 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D ++ P+ F GH L G G V A LAGG +LL + I Sbjct: 167 DAVTAIDPVSLFT-----GHQ-------------LGGLGAVHVA-ALLAGGAFLLVRHHI 207 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W IP +F+ L A + L P A P HLL+G + GAFF+ TDP ++ R Sbjct: 208 PWEIPAAFIAGLLATAWVYRLMDPTAYAPPLFHLLAGGAVFGAFFLATDPASSPVGRIPR 267 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 L+FG +AG++V +IR +G YPDGV FA+LLAN+ PL+D RPR +G Sbjct: 268 LLFGLVAGIMVIIIRVYGIYPDGVPFAILLANLFTPLLD-RIRPRPFG 314 >UniRef50_C7H9I4 Na-translocating NADH-quinone reductase, Nqr2 subunit n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9I4_9FIRM Length = 319 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 108/347 (31%), Positives = 182/347 (52%), Gaps = 45/347 (12%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 +++SP+ ++ T +M V++A P + A FG L+ ++ V+ + E L KL Sbjct: 7 VSASPHLRSEETTQSLMANVIVALCPCVVASAIIFGARALLVTAVSVVACVAFEWLYCKL 66 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 K+ A + D SA++TG++LA+++P P +++G + A+I+ KQL+GG+G N NPA Sbjct: 67 LKK--ANPISDLSAVVTGIILAMNVPVGMPIGQLIIGDLVAIIVVKQLFGGIGMNFANPA 124 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G +VL ISF M +W+ P DA +D +S Sbjct: 125 LVGRIVLFISFAGSMNNWVFP-----------DA--------------------AVDQLS 153 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL TS ++ ++ G+ G + LA L G ++++ K I I Sbjct: 154 SATPLAVADTS--------KLSLLDLFMGVHGGVLGETCALAILLGLIYMVATKTISIAI 205 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P S++ ++ + +L S +L + +LSG M GA F+ TD VT+ T +G+LI+G Sbjct: 206 PASYIGSM----FIFYLISTGSLHGALVGILSGGLMFGAVFMATDYVTSPFTLKGKLIYG 261 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G++ + IR +G Y +GV+FA+L N+ VP I+ +TR YG+ K Sbjct: 262 LCLGIVTFAIRQWGSYAEGVSFALLFMNLWVPFINDWTRQTPYGYVK 308 >UniRef50_C3WYL8 Na(+)-translocating NADH-quinone reductase subunit B n=4 Tax=Fusobacterium RepID=C3WYL8_9FUSO Length = 315 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 111/350 (31%), Positives = 170/350 (48%), Gaps = 48/350 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + + +P+ +M V++A +P A ++ FG L+ ++ + + E + Sbjct: 4 ILKTGPAPHIRTAETVESVMYDVVIALIPAFAMAVYSFGVRALILTAVSVATCIATEYIW 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ K+ + A D SA+LTG+L A +P V++G A+ + K +YGGLG N F Sbjct: 64 QKILKRDIEAF--DGSAILTGILFAFVVPVGMGLQYVIVGNFVAITLGKIVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+IG + S+PV +T++ D Sbjct: 122 NPALIGRAFVQASWPVAITTF------------------------------------AYD 145 Query: 182 GISQATPLDTFKTSVRAGHSV--EQIMQY-PIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 G + AT LD K + S+ E QY + G + G + LA L GGV+L+++K Sbjct: 146 GKAGATVLDAMKRGIPLTDSLIYEGGNQYINAFLGQMGGCLGETSALALLIGGVYLIYKK 205 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I W +P V + +L W A P + +LSG LGAFF+ TD VT+ T + Sbjct: 206 QIDWKVPA---VMIGTVFVLTWAMG----ANPFMQILSGGLFLGAFFMATDMVTSPITGK 258 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 GR+IF G+LV LIR GGYP+G A+A+L+ N VPLID Y R + +G Sbjct: 259 GRVIFALGIGILVSLIRIKGGYPEGTAYAILIMNGVVPLIDRYIRAKKFG 308 >UniRef50_B2A1V3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1V3_NATTJ Length = 330 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 111/340 (32%), Positives = 180/340 (52%), Gaps = 42/340 (12%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + SSP+ +++ S M V++A +P + ++F+ + I + ++A+L E +V KL Sbjct: 8 VDSSPHLRSKKTVSVAMFDVMIALIPIVLVSIYFYQQHAIFTIAVCMITAVLTELIVRKL 67 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + TL D SALLTGL +A+ W +L TV A+ +AK+ GGLG N FNPA Sbjct: 68 TNRQ--PTLNDGSALLTGLFVALLFSGTVAVWTAILATVLAIGVAKEFVGGLGWNLFNPA 125 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLG-IDGI 183 + G +++I P+ + WL +++ +I ++D LG +D + Sbjct: 126 IFGRSMIIILSPLFL--WL--NDLFADI--YVD--------------------LGPVDVM 159 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 +QATPL + + E ++ +P GA + LA L GG++LL++ I W Sbjct: 160 TQATPLAMLQGGMEMPSYWEMLVAFP------GGALSETSPLALLIGGIYLLYRGHINWR 213 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 IP+S + T+ + +++ A P +LSG M+GAFF+ TD VT+ N+G++IF Sbjct: 214 IPVSVIGTVVVLSLIAG-------ADPMYQVLSGGIMIGAFFMATDWVTSPINNKGKIIF 266 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTR 343 G G L L R G +GVAF++L+ N VPLID T+ Sbjct: 267 GIAIGALTILFRLGLGATEGVAFSILIMNAFVPLIDKKTK 306 >UniRef50_D1VUL1 Electron transport complex protein RnfD n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL1_9FIRM Length = 330 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/349 (29%), Positives = 179/349 (51%), Gaps = 32/349 (9%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + ++ +P+ + +IML V++A VP I ++FFG +L I ++S++ +L E + Sbjct: 14 YFVSLAPHIRSNDTVRKIMLDVIIALVPAIIGSVYFFGMRSLFLICVSSLACVLTEYVTQ 73 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KL K+ + + D SA++TG+L+A ++P P + ++ G +FA++I K+ +GG+G N N Sbjct: 74 KLLKKPI--QIGDLSAVVTGILIAFNVPITMPVFELIFGDIFAILIVKECFGGIGFNFMN 131 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ G +VL+ S+ +MT +L P + + +D Sbjct: 132 PALAGRLVLMASWTKRMTDYLSPEMVKNGVSSLSQ----------------------VDM 169 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +S ATPL + A + + I G + G + ++ L G ++L+ +K I Sbjct: 170 VSAATPLKLIGSG--AYEKLPSLFNMAI--GNIGGVIGETSSILLLLGFLYLVIRKVISV 225 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP+ ++ +CA+ + P +L+G +LGA F+ TD T T +GR+I Sbjct: 226 QIPVIYI---GVCAITLVILGIPINVIPY-EILAGGLILGACFMATDYATNPITKKGRII 281 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F G L LIR P+GV++A+ L NI P+ID +TR + YG K Sbjct: 282 FAIGCGFLTALIRVKASLPEGVSYAICLMNICTPVIDKFTRTQAYGEVK 330 >UniRef50_C9LBM8 Na(+)-translocating NADH-quinone reductase, B subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBM8_RUMHA Length = 315 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 178/350 (50%), Gaps = 44/350 (12%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 R+ + P+ R T +M+ V ++ +P + +++FG L L+ +L E + K Sbjct: 5 RVINGPHLRTPRTTRNVMMHVTISLIPALLGAIYYFGIQALYLSGLSVAVCVLTEYIWQK 64 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + K+ V A D SA++TGLLLA ++P P W +V VF++++ KQ++GG+G N NP Sbjct: 65 ITKKQVTA--GDFSAVVTGLLLAFNMPVTVPVWALVAADVFSILVVKQMFGGIGNNFVNP 122 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G +++++++P + ++ P ++V D + Sbjct: 123 ALMGRLLVMVAWPAAVMQYVVPRTVSV------------------------------DAV 152 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 S AT L T K+ G+S Q ++ G + GA + L L G ++ ++K + Sbjct: 153 SAATILGTAKSGAETGYSYLQ-----MFLGEMPGAMGETSKLLLLIGFAYMCYKKIVNAE 207 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQI--HLLSGATMLGAFFILTDPVTASTTNRGRL 301 ++++ T+ + L ++F P+ L I +L G ++G ++LTD AS +G+L Sbjct: 208 AAVTYIGTVTI---LTFIFGPDGLFTGDILLNLFGGGLIMGGCYMLTDYAFAS--RKGKL 262 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+ A+AG++ IR F YP+G+ F +L AN ++ + VYG +K Sbjct: 263 IYAAVAGIITAAIRIFSVYPEGICFGILTANCMAGMLSVLYKKHVYGMKK 312 >UniRef50_C6BTM1 Electron transport complex, RnfABCDGE type, D subunit n=4 Tax=Desulfovibrio RepID=C6BTM1_DESAD Length = 326 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/344 (29%), Positives = 169/344 (49%), Gaps = 51/344 (14%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 V ++ P+ H R + ++A +P A +W + + + L+ +A++ E + Sbjct: 9 VLTVSIPPHAHCGRTFKQDAFETIIALLPAAAFAIWHYQMLAVRVLALSCFAAVITETIC 68 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L K+ + A + +ALL GL+ IPP APWW+VV G+ +V + + ++GGLG NP Sbjct: 69 LYFMKREIEA--DNYTALLYGLMFGFLIPPAAPWWLVVAGSFISVFMGRMIFGGLGTNPL 126 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 ++G+ VL +S+P M DM L Sbjct: 127 CVPLVGWAVLAVSWPELMDF------------------------------DMTML----- 151 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAW------LAGGVWLL 235 A+ L T+ S E + +Y I S +L G+Q + GG++LL Sbjct: 152 ----ASEL-TYPLSQLKNFGPETLDEYSIKSLLL---GFQLGGTGAAQAGAVMLGGIYLL 203 Query: 236 WQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTAST 295 ++ +R IPL+F+ +A A + + P A+P+ HL+ G+T+ GAFF+ TD ++ Sbjct: 204 VRRIVRPDIPLAFIAGVAATAAIFFFIEPLEYASPEYHLICGSTLFGAFFLATDGPSSPA 263 Query: 296 TNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLID 339 + L++G + G LV +IR +G YPDGV FA+LLAN+ PLID Sbjct: 264 GHIPMLVYGFIGGALVVIIRVYGIYPDGVPFAILLANLMTPLID 307 >UniRef50_C4Z023 Electron transport complex protein RnfD n=38 Tax=Bacteria RepID=C4Z023_EUBE2 Length = 304 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/329 (31%), Positives = 171/329 (51%), Gaps = 44/329 (13%) Query: 24 VLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGL 83 VL+A P + FG L++I++ V+ + EAL + V T+ D SA +TGL Sbjct: 4 VLIALTPASIFGIVNFGLDALLRIVIGIVTCVACEALYQYFMHKKV--TVTDLSAAVTGL 61 Query: 84 LLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWL 143 L+A++IP ++G VFA+I+ KQL+GGLGQN NPA+ LLI++ MT+++ Sbjct: 62 LIALNIPSTLNVGFEIVGCVFAIIVVKQLFGGLGQNFMNPALAARCFLLIAYTGPMTNFV 121 Query: 144 PPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVE 203 + GF+DA +SG ATPL K S Sbjct: 122 TSN-------GFLDA----YSG--------------------ATPLALLKP---GAESTG 147 Query: 204 QIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFS 263 + ++ G G + + L GG++LL +K I W IP+++ + + A+L +LF+ Sbjct: 148 VVSLAKMFIGTTGGVIGETSAICLLLGGIYLLARKVINWRIPVTY---VGVFAVLIFLFA 204 Query: 264 P----ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG 319 P + + + + G +LGA F+ TD VT+ T G+++FG GLL ++ R +GG Sbjct: 205 PGHHFDVIYMLE-EVCGGGLLLGAIFMATDYVTSPITPNGKIVFGCCLGLLTFIFRMYGG 263 Query: 320 YPDGVAFAVLLANITVPLIDYYTRPRVYG 348 +GV++A++ N+ VPLI+ T P+ +G Sbjct: 264 SAEGVSYAIIFCNLLVPLIERVTVPKSFG 292 >UniRef50_C8WMP8 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Bacteria RepID=C8WMP8_EGGLE Length = 327 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 108/347 (31%), Positives = 174/347 (50%), Gaps = 43/347 (12%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 +++ P+ + T ++ML V++A VP + A FGW L+ + + + +L E L L Sbjct: 11 LSTPPHVFDGITTQKVMLNVVIALVPTLIASFVIFGWRALLVTAVTTAACVLFEYLWCLL 70 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 RK T D SA++TGLLLA ++P P +M V+G+ A+++ K+L+GG+G+N NPA Sbjct: 71 RKTP--QTAGDLSAVVTGLLLAFNLPSTIPLYMAVIGSFVAIVVVKELFGGIGRNFANPA 128 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++ +VL +SF MT++ P GF+ G T G+D +S Sbjct: 129 IVARIVLSVSFTAAMTNYAAPQ-------GFLP-------GAT-----------GVDAVS 163 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL Q+ + G+ G + +A L G WLL + + + I Sbjct: 164 SATPL---------APGAAQLPFMDLLFGVHPGVLGETCGIAILLGFAWLLVTRTVTFTI 214 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P ++ T+ +C++L T + SG +L A F+ TD T+ TT +G++IF Sbjct: 215 PGVYVGTVIVCSLL-------TGHDVATQVFSGGLLLCAVFMATDYTTSPTTFKGQVIFA 267 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GL+ LIR +G +G A+++LL N+ VP ID T G K Sbjct: 268 VGLGLITCLIRFWGNMNEGAAYSILLMNLVVPYIDSLTATTPLGGEK 314 >UniRef50_B8J065 NQR2 and RnfD family protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J065_DESDA Length = 320 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/340 (29%), Positives = 156/340 (45%), Gaps = 40/340 (11%) Query: 12 HNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAA 71 H R + L +L +P A +W +G L + L+ + ++ EAL K + + Sbjct: 20 HCGRTIRKYSLFTILCCLPAAAMAIWNWGLPALRVMSLSVAACVVVEALCEKAMGRQI-- 77 Query: 72 TLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVL 131 + D +A+ GL+ A +P APWW+V+LG + + + K +GGLG NP + ++G+ VL Sbjct: 78 EVDDFTAVYAGLIFAFLLPADAPWWLVILGAIICITLGKMAFGGLGANPVSTPLVGWAVL 137 Query: 132 LISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDT 191 +SFP+ M D N ++LG D I L Sbjct: 138 AVSFPIFM--------------------------------DPNAMQLGTDFIDPLVRLKF 165 Query: 192 FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 F + + ++ SG+ AG L AGG +L +RW I L F V Sbjct: 166 FGAASADSIPLLDLLMGKQISGLGAGQ-----VLGLFAGGSFLCATGTVRWQISLGFFVG 220 Query: 252 LALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLV 311 +A A + P A+ HL +G+ MLG FF+ T+ T ++G GLLV Sbjct: 221 VAALAAFFHMSDPVHNASAFFHLCTGSVMLGGFFMATEMGTTPLRPLPMFLYGLTGGLLV 280 Query: 312 WLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +IR +G + DGV FA+LLAN+ P +D RPR +G + Sbjct: 281 MVIRKYGVWIDGVPFAILLANMLTPYLDML-RPRPFGGSR 319 >UniRef50_C8WYR0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYR0_DESRD Length = 315 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 115/346 (33%), Positives = 183/346 (52%), Gaps = 39/346 (11%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 +++ P+ H+ ++M +LLA +P + + ++G+G + +A VSAL+ + L+ K Sbjct: 8 VSAVPHAHSGNTLQKMMRQILLALIPALLIGVAYYGFGVVQVAAIAVVSALVWQVLLQKA 67 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + V L + + +++ LLLA+ +PP PWW V +GT+ V++ ++YGG G NPFN Sbjct: 68 MHKPVC--LANMTTVVSALLLAMIMPPGLPWWAVCVGTLTMVLLGMEIYGGYGNNPFNGV 125 Query: 125 MIGYVVLLISFPVQMTSW-LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 +I +VVL ISFP M+SW PP G++ T+ + + Sbjct: 126 LIAWVVLQISFPAAMSSWAYPP-------------------------GELMTINTPLQVL 160 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 + P V S ++ G G Q L L GG++LL+++ I WH Sbjct: 161 QEDGPF-----FVNEFFSFSDLLM-----GRTVGFAGQTSALFLLLGGLFLLYRRVITWH 210 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 IP+SFL + A L W + E A+P HL++G TM+ AFF+ TD ++ T G L++ Sbjct: 211 IPVSFLAGVVAFAGLFWAINAEAHASPLFHLVAGGTMISAFFLATDFPSSPVTKTGMLLY 270 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G AG+L +IR +G +PDG FAV L ++ PL+D PRVYG Sbjct: 271 GFSAGVLTVVIRIWGQWPDGAFFAVFLMSMLTPLLD-KIAPRVYGR 315 >UniRef50_C4FA61 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FA61_9ACTN Length = 310 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/345 (28%), Positives = 173/345 (50%), Gaps = 45/345 (13%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 +SP+ H + T IM +V L+ +P + A ++ +G G + +L+ +AL+ E + +L Sbjct: 7 ASPHFHGKGSTQWIMGMVCLSLLPTLVASVFLYGLGAPLLVLVCVATALVTEHVCCRLMN 66 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + +T D S ++T +L A ++P ++ +LGTVFA+ + K L+GG+G N NPA+ Sbjct: 67 RE--STAGDLSCVVTAMLFAFTLPANCGYFPAILGTVFAIAVVKMLFGGIGCNFANPAVT 124 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 V ++++ P+ + ++ + + +D I+ A Sbjct: 125 ARVFIMLAMPIALGAY------------------------------PDIMGRPLDAITGA 154 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 TPL + A +S +M G+ AGA + + LAG V+LL + + + Sbjct: 155 TPL-AMNAAGDAPYSYMDMM-----FGLHAGALGETCIITLLAGYVFLLVMRVVDAWATV 208 Query: 247 SFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL 306 F+ T+A+ + G+ +LSG LGAF++ TD T T +G++IFG Sbjct: 209 PFIATVAV--ITGFAGQDAIY-----QVLSGGLALGAFYMATDYTTTPMTPKGKIIFGIG 261 Query: 307 AGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G++ L+R F P+GVAF++L N+ PLID YTRP+ G K Sbjct: 262 CGVITALVRLFAAAPEGVAFSILFMNMFTPLIDRYTRPQPAGGVK 306 >UniRef50_C1D7J0 Electron transport complex, NQR2 and RnfD n=3 Tax=Proteobacteria RepID=C1D7J0_LARHH Length = 347 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 120/346 (34%), Positives = 174/346 (50%), Gaps = 18/346 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 SSP+ T +IM V+ A +P +W FG + +L +S +L E L+L+ Sbjct: 12 SSPHLVTGHDTPKIMRHVVYALLPVTLWAIWQFGTSAFLLVLTVVLSCVLTERLILRH-- 69 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 A +D SA++TGL LA+++PP P WM + + A+ + K L+GGLG N FNPA++ Sbjct: 70 ---PAAPRDMSAVITGLTLALTLPPALPLWMGAVAGIVAIALGKLLFGGLGSNVFNPALV 126 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 G + SFP MT+W P + + F+ RL DG + A Sbjct: 127 GRAFVQASFPAAMTTWTPAGAAGRFTELIPSTLALPFTSPDPVAA-WAAARL--DGFAGA 183 Query: 187 TPLDTFKTSVRAGHSVEQ--IMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 TPL +K AG Q + P SG L + L +A G++L + + W I Sbjct: 184 TPLAAWKF---AGELPGQGHFLLSPGVSGSLG----ETSALLIVACGLYLAVRGMLNWRI 236 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 PL+ L+ AL + F P+ L SG M GA+F+ TD VTA T RG ++G Sbjct: 237 PLAVLLGAALVSTAFGPF-PDIGNGVLFVLTSGGLMFGAWFMATDMVTAPITRRGMWVYG 295 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 L G L+ IR +GG +GV +A+LLAN VP I+ T+PR YG + Sbjct: 296 LLIGALIVTIRFWGGASEGVMYAILLANALVPHIEALTQPRHYGRK 341 >UniRef50_B0S2D0 Sodium-translocating NADH-quinone reductase subunit B n=2 Tax=Finegoldia magna RepID=B0S2D0_FINM2 Length = 331 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/351 (26%), Positives = 169/351 (48%), Gaps = 42/351 (11%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL----VQILLASVSALLAEALVLK 63 + + ++M V+ A +P ++F+G L + I++A + LA A + K Sbjct: 5 KEFYNKYFMKQKMMHPVMFALLPIALVAIYFYGLRVLALFLLNIIVACLVEYLANAKIFK 64 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 +K S +A++T L +++PP P+W+ ++G F + K ++GG +N FNP Sbjct: 65 RKKIS-------EAAIVTSCLYTMTLPPSIPFWISIVGIAFGIFFGKMVFGGFAKNVFNP 117 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++ V + ++FP QMT + + GF GG L +D + Sbjct: 118 ALVARVFIYVNFPQQMTIYWNKA-----VGGF-------------PGGFGTYLTKSLDSM 159 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 +Q+TP+ FK HS + + ++ G + G + + + G ++L+++K W Sbjct: 160 TQSTPMTAFKV-----HSTFETIPTMLF-GQIPGVIGETCKVLIIIGAIYLIYKKVASWQ 213 Query: 244 IPLSFLVTLALCAMLGWLFSP---ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 I L CA L +F+ ++ P +L G + G F+ TDPV+A+ T G+ Sbjct: 214 IMAG--SVLGFCA-LSLVFNAMGVTSVPNPIYGMLMGGFLFGTVFMATDPVSAAKTTVGK 270 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+G + G++ +IR F + GV FAVL+ N P+IDY +V ++K Sbjct: 271 WIYGFIIGIVTVIIRGFALFAGGVMFAVLIGNTFAPIIDYCVN-KVQANKK 320 >UniRef50_C9A8K0 RnfD protein n=3 Tax=Enterococcus casseliflavus RepID=C9A8K0_ENTCA Length = 356 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 114/351 (32%), Positives = 169/351 (48%), Gaps = 36/351 (10%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 SP+ + +T +IM V+LA +P + + FG +A +A A+ + L K+ Sbjct: 25 SPHIRSNDETVKIMGCVVLALLPAVLFSGYLFGLKVYGLFFIALATAFAADGIWSYLIKR 84 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 D S ++T LLL +++PP APW+ V+G FAVII K+ +GG+G N NPA+ G Sbjct: 85 PFRF---DLSIVVTALLLTMNLPPTAPWYFPVIGVAFAVIIVKEFFGGIGYNFLNPALGG 141 Query: 128 YVVLLISFPVQM--TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQ 185 +L+ F QM SW P P F + S TA+ D +S Sbjct: 142 RALLIGLFYNQMFLISW--PD------PPFGSIAPDVVSQATAN-----------DVVSG 182 Query: 186 ATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIP 245 ATPL K AG ++ + G G + L L GG++L+++K I IP Sbjct: 183 ATPLAVMK----AGDTLSGSDLLDAFLGFTGGRIGETSALLLLLGGIFLVYKKIISPRIP 238 Query: 246 LSFLVTLALCAMLGWLFSPETLAAPQ-----IHLLSGATMLGAFFILTDPVTASTTNRGR 300 L T+ L A ++ PE L H++SG MLGA ++ TD + T G Sbjct: 239 LIIFATIGLFA---FILGPEGLFTGSWQTVIGHIISGGAMLGAIYMATDYSSTPGTKAGE 295 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +F GLLV L R FG +G+++A+L+ N PLID + R R+ G K Sbjct: 296 NLFALGVGLLVVLFRFFGFTNEGMSYAILIMNCFTPLIDRFLRLRILGEGK 346 >UniRef50_Q1Q257 Similar to Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q257_9BACT Length = 367 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 161/333 (48%), Gaps = 40/333 (12%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPG-IAAQLWFFGWGTLVQILLASVSALLAEAL---VL 62 + P+ N T + M VL+A G + ++F+G ++ L+ S+ + + Sbjct: 53 TQPFIRNNTDTKKFMGAVLIALTMGWVFPAMYFYGLQCVISKLIVSLVVGVFVVDVIWAI 112 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 R+ ++ ++ LL+ +PP AP W++ G A+I + + GG+G N N Sbjct: 113 IAREDHIS-----EGGFVSCLLVPAILPPQAPLWLIGFGAAMAIIF-RNILGGVGYNLVN 166 Query: 123 PAMIGYVVLLISFPVQM-TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 PA+ + L I FP + T + P V IP D++TLR G+D Sbjct: 167 PALFSRLFLTICFPSLLATGYQMPF---VGIP------------------DLHTLRYGLD 205 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQY-PIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 I+ ATPL FKT I Y + G G+ + LA + G+WL+ K Sbjct: 206 TITHATPLTAFKTD-------GTITSYFSLLIGTANGSLGETCRLALILSGIWLVKMKVA 258 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W +P+S+ ++ + + + L S E +A P LLSG +LGAF+++TDP+TA+ + + Sbjct: 259 NWRLPVSYFGSVFIFSGMFSLLSKENVAPPIFQLLSGGLVLGAFYMITDPITATYNQKAK 318 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANI 333 I+G G + L+R++ +G +A+LL N+ Sbjct: 319 WIYGIGCGFITVLLRNYTTLSEGAMYAILLMNL 351 >UniRef50_A6NPN1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN1_9BACE Length = 414 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 113/335 (33%), Positives = 177/335 (52%), Gaps = 46/335 (13%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIA-AQLWFFGWGTLVQILLASVSALLAEAL--V 61 IAS+P+ + T +ML VL+A +P + + +FFG + L+++ + EAL + Sbjct: 96 IASAPHLTTRDTTRTLMLDVLIALMPALLFSGCYFFGPRAFLVTLVSAAGCVGFEALFCL 155 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + R+Q T+ D SA++TG+LLA ++P P+W V+LG FA+++ KQL+GGLG+N Sbjct: 156 ITRRRQ----TVDDLSAVVTGVLLAFTLPANVPYWAVLLGDFFAIVVVKQLFGGLGKNFL 211 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ G L SFP M+++ + GF ID Sbjct: 212 NPALAGR-AFLFSFPAVMSAF----PAVRSWEGF-----------------------AID 243 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 S ATP+ S+ AG S+ + +++G+ +G+ + L GG++LL ++ IR Sbjct: 244 AQSAATPM----ASLHAG-SLPSVSLLEMFTGVRSGSLGEVSAALLLLGGLYLLARRVIR 298 Query: 242 WHIPLSFLVTLALCAMLGWLFSP---ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 IPLSFL T+A+ L W F +L L+ G +L AFF+ TD T+ T Sbjct: 299 LRIPLSFLGTVAV---LSWCFPQGGNSSLDWTLYSLMGGGLLLAAFFMATDFTTSPVTFW 355 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANI 333 G+++ G G L R+FG YP+GV FAVL+ N+ Sbjct: 356 GQVVCGVGCGALTVFRRTFGSYPEGVGFAVLVMNL 390 >UniRef50_B8FN65 NQR2 and RnfD family protein n=3 Tax=Desulfobacteraceae RepID=B8FN65_DESAA Length = 329 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 100/351 (28%), Positives = 170/351 (48%), Gaps = 37/351 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 F ++ +P+ HN + S+ ++LAA+P + + +G L I L +A+ E + Sbjct: 7 FVVSYAPHCHNGDRISKKSYNMMLAALPAVFFGILQYGIAALSVICLCVSTAMAWELIFN 66 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 ++ KQ T+ D +A LTGLLL + +PP+ PWW+++ T ++I K ++GG+G NPFN Sbjct: 67 RIMKQP--PTIGDGNAALTGLLLGMLMPPVVPWWVILTMTFVTILIGKVIWGGMGGNPFN 124 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 P ++GY + +S+ GF+D + G+ I Sbjct: 125 PVILGYAITRLSW-----------------GGFMDVDASLAPGY-------------IFD 154 Query: 183 ISQATPLDTFKTSV---RAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 + A P+ K+++ + + G G L + GG++L+ + Sbjct: 155 FNMANPIVAVKSAIWDGAGADAASAFSTKALLLGQHCGTIGTMFGLGLIVGGLYLIIRGY 214 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPE-TLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 +RW + LS+L + + A L F PE A H+L+G T++ AFF + + + Sbjct: 215 LRWELCLSYLAGVIVTATLFSAFGPEGKYAGATFHVLAGFTLIAAFFFMAEDSSTPINLI 274 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 +I+G AG+L LIR+ G Y DGV +A LL N+ PL+D RP+ G Sbjct: 275 PMVIYGVGAGVLTILIRNIGNYADGVIYAFLLMNVLNPLLD-NIRPKALGK 324 >UniRef50_C2MAM1 NADH:ubiquinone oxidoreductase, na(+)-translocating, b subunit n=16 Tax=Bacteroidales RepID=C2MAM1_9PORP Length = 407 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 107/373 (28%), Positives = 169/373 (45%), Gaps = 53/373 (14%) Query: 10 YTHNQRQTSRIMLLVLLAAVP---------------------GIAAQLWFFGWGTLVQIL 48 + H+ + R+M V+LA VP G + WF L +I+ Sbjct: 48 HVHDAIDSKRVMSTVVLALVPALLFGMYNVGLQHFIAIGQTAGFWSMFWFGFLAVLPKIV 107 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E V + + + + L+TG+L+ + +P P WM+ + +V+ Sbjct: 108 VSYVVGLGIEFAVAQWKHEEI-----QEGYLVTGMLVPMIVPVDTPLWMIAVAVAMSVVF 162 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 AK+++GG G N FN A++ +L ++P MT ++ V + IF Sbjct: 163 AKEVFGGTGYNIFNVALVTRAILFFAYPAAMTG----DKVFVR-------TEPIFG--FG 209 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYP-----IYSGILAGAGWQWV 223 GGDM T +DG S ATPL T+ ++ M P + G + G+ + Sbjct: 210 GGGDMAT--AAVDGFSGATPLGQVATAGDTLPTIVNTMGEPSTLWDAFWGFIPGSIGEVS 267 Query: 224 NLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----HLLSGAT 279 A L G + L+W + + +S +V AL +L + T AA Q+ HLL G Sbjct: 268 TFAILLGAILLIWTGVASYKVIVSGVVGAALMTLL--FNAIGTTAAMQLDVAHHLLYGGF 325 Query: 280 MLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLI 338 G F+ TDPVT++ T G+ I+G L G++ IR GYP+G+ A+LL N+ PLI Sbjct: 326 AFGLVFMATDPVTSARTETGKWIYGLLVGVMCVFIRVLNPGYPEGMMLAILLMNVFAPLI 385 Query: 339 DYYTRPRVYGHRK 351 DY RK Sbjct: 386 DYVVVNNNISKRK 398 >UniRef50_A6L5A0 Na+-translocating NADH-quinone reductase subunit B n=31 Tax=Bacteroidetes RepID=A6L5A0_BACV8 Length = 402 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 94/362 (25%), Positives = 163/362 (45%), Gaps = 56/362 (15%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGW---------------------GTLVQIL 48 + H+ + RIM +V++A +P + ++ G+ L +I+ Sbjct: 47 HIHDAIDSKRIMSMVVIALIPALLFGMYNVGYQHFLAVGQEAGFFEKFIYGFLAVLPKII 106 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E +V + + + + L++GLL+ + +P P W++ + T F+VI Sbjct: 107 VSYVVGLGIEFVVAQWKNEEI-----QEGFLVSGLLIPMIVPVECPLWILAVATAFSVIF 161 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 AK+++GG G N FNPA+I L ++P +M+ DA+ V Sbjct: 162 AKEVFGGTGMNIFNPALITRAFLFFAYPTKMSG---------------DAVWVSTDSIFG 206 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYP-----IYSGILAGAGWQWV 223 GG +DG + AT L T+ + + P + G++ G+ + Sbjct: 207 IGGGQV-----VDGFTGATMLGQAATAAPGASELINVNGTPATMWDMVVGLIPGSIGETS 261 Query: 224 NLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----HLLSGAT 279 +A G + LLW W S + ++ +F Q+ H++ G Sbjct: 262 VIAIALGAIILLWTGVASWKTMFSVFAGGIVMGLIFNVFGSTDNMMAQLPWYEHIVLGGF 321 Query: 280 MLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLI 338 GA F+ TDPVT++ T +G+ I+G L G++ +IR GYP+G+ A+LL NI PLI Sbjct: 322 CFGAVFMATDPVTSARTEKGKFIYGFLIGVMAIVIRVLNPGYPEGMMLAILLMNIFAPLI 381 Query: 339 DY 340 DY Sbjct: 382 DY 383 >UniRef50_D2MNQ0 NQR2 and RnfD family protein (Fragment) n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ0_9FIRM Length = 366 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 165/355 (46%), Gaps = 56/355 (15%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIA-AQLWF---FGWGTLVQI----LLASV 52 M F +P +R T IM+ V L + +A A +W+ GW ++I ++ Sbjct: 1 MKFLFNPAPNYRTKRSTDSIMMDVGLGLLVVLAYAIIWYGFNNGWNYSLRIGLMAMMTCT 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 +A+L EA+ K+ K+ V +LK + +T L++ + ++ +++ T+ AV+ K + Sbjct: 61 TAILTEAIYFKVMKKDVKNSLKHSYVWITALIITLITRINVSYYALIIATIIAVLFGKLI 120 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGD 172 +GG GQN FNPA +++ SF ++ Sbjct: 121 FGGFGQNIFNPAAFAEAIIMNSFAASVSE------------------------------- 149 Query: 173 MNTLRLGIDGISQATPLDTFKTS--VRAGHSVEQIMQ-YPIYSGILAGAGWQWVNLAW-- 227 D ++ ATP+ T + V + E ++Q + + G+ G + + ++ Sbjct: 150 --------DFMTGATPMATLSSLNWVIRSSAFEAVLQPFNGFVGMFLGNYYSTIGASFAL 201 Query: 228 ---LAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAF 284 L GG +L+++KAI W + ++L + +++ LF + +++L G + GA Sbjct: 202 VILLVGG-YLIYRKAIDWRLTCTYLAAIFCMSLITGLFHGNAIKFAIVNVLGGGVVFGAV 260 Query: 285 FILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLID 339 F+LTDPVT+ + G+ +F A L LIR PDGV F++LL N+ P ID Sbjct: 261 FMLTDPVTSPVSPAGKYVFAIGAATLTLLIRWKANLPDGVLFSILLMNMLTPAID 315 >UniRef50_Q5LC49 Electron transport complex protein RnfD n=42 Tax=Bacteria RepID=Q5LC49_BACFN Length = 330 Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 83/124 (66%) Query: 226 AWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFF 285 A + G +++LW++ I WHIP+S LVT+ + + + L +PE +P I LLSG MLGA F Sbjct: 202 ALILGLLYMLWKRIITWHIPVSILVTVFVFSGIMHLANPEAYVSPVIQLLSGGLMLGAIF 261 Query: 286 ILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPR 345 + TD VT+ + +G LI+G GLL +IR FG YP+G++FA+L+ N PLI+ Y +P+ Sbjct: 262 MATDYVTSPMSKKGMLIYGVCIGLLTVVIRLFGAYPEGMSFAILIMNAFTPLINTYCKPK 321 Query: 346 VYGH 349 +G Sbjct: 322 RFGE 325 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 84/138 (60%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++ SP+ H + M VL+A +P L +FG G L+ + ++ L E + K Sbjct: 7 VSLSPHVHGGDSVQKNMYGVLIALIPAFIVSLVYFGLGALIVTATSVIACLFFEWAIGKF 66 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + T+ D SA++TG+LLA ++P P W+++LG +FA+ + K +GGLG NPFNPA Sbjct: 67 LLKKETTTICDGSAVITGVLLAFNLPSNLPVWIIILGALFAIGVGKMSFGGLGNNPFNPA 126 Query: 125 MIGYVVLLISFPVQMTSW 142 + G V LL+SFPVQMTSW Sbjct: 127 LAGRVFLLLSFPVQMTSW 144 >UniRef50_A6TT06 NQR2 and RnfD family protein n=2 Tax=Bacteria RepID=A6TT06_ALKMQ Length = 320 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 159/334 (47%), Gaps = 31/334 (9%) Query: 19 RIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSA 78 ++M VL + +P ++F+GW TLV + + SV + E L + + V+ + Sbjct: 13 KMMRKVLYSLIPVTLGSIYFYGWRTLVLMAVISVFGIFTEYLFKRKSNKKVS-----EAV 67 Query: 79 LLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQ 138 L+T +LL +++P P+W+ ++G +F ++ AK+++GG G N FNPA+ L ++FP Sbjct: 68 LVTSILLTLTLPASTPFWVGIIGIIFGIVFAKEIFGGFGHNVFNPALAARTFLYVTFPEP 127 Query: 139 MT-SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 MT W ++ P GG L +D I+Q+TPL +R Sbjct: 128 MTVQW---STVSSGFP----------------GGFARYLSPALDTITQSTPLGI----LR 164 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 G E + ++ G +G+ + L +LL+ K W + L+ ++ Sbjct: 165 QGG--EMLPLRNLFIGNTSGSLGEASAFLILVAAAYLLFTKTADWKLMLAPVIGFVGIHS 222 Query: 258 LGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 + L + ++ +P LLSG + F+ TDP+TA + I+G L G++ +IR F Sbjct: 223 ILLLANVSSVPSPLHGLLSGGFLFMTVFMTTDPITAPKQTEAKWIYGLLIGIIASVIRIF 282 Query: 318 GGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G + G FAVL+ N P++D + RK Sbjct: 283 GIFVGGAMFAVLIMNTFSPILDEGIKHLKSSKRK 316 >UniRef50_C6BWF3 NADH:ubiquinone oxidoreductase, subunit B n=2 Tax=Deltaproteobacteria RepID=C6BWF3_DESAD Length = 399 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 43/287 (14%) Query: 58 EALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLG 117 E L +RK + + L+TG L+ + +PP P W V L T F V+I K+++GG G Sbjct: 135 ETLFAVIRKHEI-----NEGFLVTGSLIPLIVPPHIPLWQVALATSFGVVIGKEIFGGTG 189 Query: 118 QNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLR 177 +N NPA++ L ++P ++ N++ Sbjct: 190 KNILNPALLARAFLFFAYPAHISG--------------------------------NSVW 217 Query: 178 LGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQ 237 + +DG S ATPL V + + + G + G+ + LA L GGV L++ Sbjct: 218 VPVDGFSGATPL-ALAAEGGINAVVAKYSWWDCFIGTIPGSLGETSTLACLIGGVVLVFT 276 Query: 238 KAIRWHIPLSFLV-TLALCAMLGWLFS---PETLAAPQIHLLSGATMLGAFFILTDPVTA 293 W I +S L A+ + + S P +P HL+ G G ++ TDPV++ Sbjct: 277 GIASWRIMVSLLGGAFAVAIIFNAVSSGSNPMMTVSPLWHLVMGGLAFGMVYMATDPVSS 336 Query: 294 STTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLID 339 S T++G+ +GAL G+++ LIR+ YP+GV A+L N+ P ID Sbjct: 337 SMTHKGQFYYGALIGIMIVLIRTVNPAYPEGVMLAILFGNVCAPFID 383 >UniRef50_B0P6D0 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D0_9FIRM Length = 317 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 151/306 (49%), Gaps = 32/306 (10%) Query: 38 FFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWM 97 ++G L+ A + A++A+A LR + A +D S ++TGL++A+ +P P+++ Sbjct: 18 YYGPRALMVCAAAVIPAVIADAACTLLRGR--APNPRDLSPIVTGLIIAMMMPASVPYYV 75 Query: 98 VVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFID 157 +VFA+ I K +GG G N FNPA G+ I +P + + P + +P F D Sbjct: 76 PAAASVFAIAIVKHPFGGTGHNLFNPAAAGFSFAAICWPGLVFMYPMPFD---RLPLFGD 132 Query: 158 AIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAG 217 ++ ++LG GI TS+ G+ Y G + G Sbjct: 133 VTTTLYQNPAF------VIKLG--GIPSND-----ITSMLLGN----------YPGPM-G 168 Query: 218 AGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSG 277 A V A L +LL+++ +RW +P+ FL T AL A L + + + + L+SG Sbjct: 169 ATNILVVAACLG---YLLFRRTVRWQLPVPFLATCALIAFLFPRVAGDGIQSVIYELMSG 225 Query: 278 ATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPL 337 A + GA F +TDPVT+ + ++G AG + L R GGY + ++FA+LL+N V L Sbjct: 226 AMLFGAVFCITDPVTSPKRDTSLAVYGVFAGAITMLFRYVGGYEESMSFAILLSNAFVSL 285 Query: 338 IDYYTR 343 ID Y Sbjct: 286 IDRYNE 291 >UniRef50_A9NEB1 NADH oxidoreductase complex RnfABCDGE type, D subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB1_ACHLI Length = 356 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 55/350 (15%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL----VL 62 +SPY + T R+M VL+A P + ++ FG L +IL++ + + EAL V Sbjct: 10 TSPYIRKETSTKRMMFDVLIALTPVVFFSIYRFGLDALARILVSLIIFVGVEALYFLSVT 69 Query: 63 KLRKQSVAA---------TLKDNSA-LLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 ++ + ++ + SA ++ ++ A+ +P ++VV+G +F I K + Sbjct: 70 RVDGYNFKDKIKNKFKKYSINNFSAPAVSAVIYAMLLPNQLHLYVVVMGALFGAAIGKMI 129 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGD 172 +GGLG N FNPA G V + ++F T GFIDA A+G Sbjct: 130 FGGLGMNIFNPAAAGRVFIALAFTTFFTGSY----------GFIDA---------AAG-- 168 Query: 173 MNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGV 232 AT L T V +S+ ++ G + G+ + +LA L G Sbjct: 169 -------------ATALSTSFPEVLNSYSLIDLLV-----GNIPGSMGEINSLAILFGLA 210 Query: 233 WLLWQKAIRWHIPLS-FLVTLALCAMLGWLFSPETLAAPQI-HLLSGATMLGAFFILTDP 290 +LL +K+ + LS L+ AL + G++ P + I LLSG + G F++TDP Sbjct: 211 YLLIRKSADYRPVLSGLLIFTALATVAGFILHPTLVFEYVIFQLLSGGLLFGLTFMITDP 270 Query: 291 VTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDY 340 T+ T GR FG + G LV+ IRSFG P+GVAFA+L N+ VPL+DY Sbjct: 271 ATSPITRPGRWWFGLIVGSLVFFIRSFGSLPEGVAFALLFGNLMVPLLDY 320 >UniRef50_A4BWI5 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Polaribacter irgensii 23-P RepID=A4BWI5_9FLAO Length = 420 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 144/309 (46%), Gaps = 44/309 (14%) Query: 55 LLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYG 114 LL E + ++ V + L+TG+L+ + +P P WM+ + VF VII K+++G Sbjct: 116 LLVEFIFAVIKGHEV-----EEGYLVTGMLVPLIVPVDTPLWMLSVAVVFGVIIGKEVFG 170 Query: 115 GLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEI----AVNIPGFIDAIQVIFSGHTASG 170 G G N NPA+ L ++P +W+ ++ AVN+ DAI SG T G Sbjct: 171 GTGMNILNPALTIRAFLFFAYP----TWMSGDKVWVYDAVNMSE-ADAI----SGETMLG 221 Query: 171 GDMN-TLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLA 229 + L I G + A L + + E + + G + G+ + L Sbjct: 222 YYAKASQDLTIKGTNGAADL----VTTYGDRANELYSTFDKFMGFIPGSVGETSTFLILI 277 Query: 230 GGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----------------H 273 G L++ K W I LS V A++G +F+ + +AA I H Sbjct: 278 GAAILIFTKIASWRIILSAFVG---AAVMGLIFN-QVVAADIITESSKFYGLMSTVWWEH 333 Query: 274 LLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLAN 332 L G GA F+ TDPVT S TN+G+ I+G L G + +IR F YP+GV A+LL N Sbjct: 334 LTIGGLAFGAVFMATDPVTGSQTNKGKWIYGFLIGFISIMIRVFNPAYPEGVFLAILLMN 393 Query: 333 ITVPLIDYY 341 + P ID+Y Sbjct: 394 VFAPTIDHY 402 >UniRef50_Q1QX85 Na(+)-translocating NADH-quinone reductase subunit B n=4 Tax=Proteobacteria RepID=NQRB_CHRSD Length = 411 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 38/272 (13%) Query: 75 DNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLIS 134 + +T +L A+ +P P W V LG F V+I K+++GG G+N NPA+ G L + Sbjct: 148 NEGFFVTSVLYALILPATIPLWQVALGITFGVVIGKEIFGGTGKNFLNPALTGRAFLYFA 207 Query: 135 FPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKT 194 +P Q++ D++ V G+T + + G+ + QA Sbjct: 208 YPAQISG---------------DSVWVAADGYTGATALSTAAQNGMSAVQQAYS------ 246 Query: 195 SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLAL 254 + + G + G+ + LA L G LL + W I L V +AL Sbjct: 247 ------------WWDAFLGFIPGSVGETSTLAILIGAAVLLITRIASWRIMLGVFVGMAL 294 Query: 255 CAMLGWLFSPET---LAAPQI-HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLL 310 AML E+ P HL+ G G F+ TDPV+AS T+ G+L+FG L G++ Sbjct: 295 TAMLFTAIGSESNPMFGMPWYWHLVLGGFAFGMVFMATDPVSASMTDPGKLLFGFLIGVM 354 Query: 311 VWLIRSFG-GYPDGVAFAVLLANITVPLIDYY 341 LIR +P+G+ A+L AN+ P+ID++ Sbjct: 355 TVLIRVVNPAFPEGIMLAILFANLFAPMIDHF 386 >UniRef50_A8ZWA7 NADH:ubiquinone oxidoreductase, subunit B n=4 Tax=Bacteria RepID=A8ZWA7_DESOH Length = 393 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 97/367 (26%), Positives = 157/367 (42%), Gaps = 64/367 (17%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---------TLVQILLASVSALLA 57 +PY + R M +V+LA +P + ++ G+ +L + L + +L Sbjct: 44 QAPYVRDSIDLKRFMSMVILALMPPLFFGIYNTGYQASMAAGLSLSLFDVTLRGLRIVLP 103 Query: 58 ------------EALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFA 105 E L +RK ++ L+TGLL +++PP P W +G F Sbjct: 104 LIIVSYGVGFFWELLFASIRKHPIS-----EGFLVTGLLFPLTLPPSIPLWQAAVGISFG 158 Query: 106 VIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSG 165 V+I K+++GG G+N FNPA+ G L ++P +M+ DA+ V Sbjct: 159 VVIGKEIFGGTGRNIFNPALTGRAFLFFAYPARMSG---------------DAVWV---A 200 Query: 166 HTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQ------YPIYSGILAGAG 219 A+G G+D ++ ATPL +AG S+ + + ++ G G+ Sbjct: 201 DLATGS-------GVDAVTGATPLAV-AALAQAGESIVETLANTGLPWLTMFLGNYPGSI 252 Query: 220 WQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFS-----PETLAAPQIHL 274 L LAG L+ W I + + L L LF+ P P HL Sbjct: 253 GGTSALCCLAGAALLIVTGIASWRIIIGGVAGLLATGWLLTLFAGPGAHPWFGLNPLYHL 312 Query: 275 LSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANI 333 + G G ++ TDPV+ R ++G L G+L LIR F YP+G+ A+L N+ Sbjct: 313 IMGGFAFGIVYMATDPVSGPGMENARWVYGFLIGMLTVLIRVFNPAYPEGIMLAILFMNL 372 Query: 334 TVPLIDY 340 PL+D+ Sbjct: 373 FAPLLDH 379 >UniRef50_B0MXK4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXK4_9BACT Length = 368 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 100/360 (27%), Positives = 149/360 (41%), Gaps = 63/360 (17%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIA---------------AQLWFFGWGTLVQILLASVSA 54 + + R M++V++A +P + A WF L I+++ V Sbjct: 47 HIRDCNDMKRTMIVVVVALMPALLFGMYNTGYQVGMTGWAAFWFGFLKVLPMIVVSYVVG 106 Query: 55 LLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYG 114 L E + R V + L++GLL+ + +P P WM+ LGT FAVI K+++G Sbjct: 107 LGIEFFFAQKRGHEV-----NEGFLVSGLLIPMIMPVGTPLWMIALGTAFAVIFGKEVFG 161 Query: 115 GLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMN 174 G G N FNPA++ + ++ P FI +V F+ Sbjct: 162 GTGMNVFNPALVARAFVFF-------AYTP----------FISGEKVWFAD--------- 195 Query: 175 TLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWL 234 D +S AT L+ TS +S + G + G + LA L G L Sbjct: 196 ------DAVSGATALEQLATSGAMSYSTAD-----AFLGFIPGCVGETSTLAILIGAAIL 244 Query: 235 LWQKAIRWHIPLSFLVTLALCAMLGWLFSP--ETLAAPQIHLLSGATMLGAFFILTDPVT 292 L+ W +SF+ L +G+ F T HL+ G GA F+ TDPVT Sbjct: 245 LFTGVASWRT-MSFVFIGGLA--MGYFFQALGVTTYPAWEHLIVGGFAFGAVFMATDPVT 301 Query: 293 ASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 ++ T G+ I G L G L LIR YP+G+ A+L N PL+DY RK Sbjct: 302 SAQTRTGQYIVGFLTGALAVLIRVVNPAYPEGMMLAILFMNALAPLVDYCVVESSISRRK 361 >UniRef50_Q7MIC8 Na(+)-translocating NADH-quinone reductase subunit B n=288 Tax=Bacteria RepID=NQRB_VIBVY Length = 414 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 84/306 (27%), Positives = 138/306 (45%), Gaps = 52/306 (16%) Query: 58 EALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLG 117 E L +RK V + +T +L A+ +PP P W LG F V++AK+++GG G Sbjct: 144 EVLFCMVRKHEV-----NEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEIFGGTG 198 Query: 118 QNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLR 177 +N NPA+ G L ++P Q++ GD+ + Sbjct: 199 RNFLNPALAGRAFLFFAYPAQIS------------------------------GDV--VW 226 Query: 178 LGIDGISQATPLDTFKTSVRAGHS--VEQIMQYPI-----YSGILAGAGWQWVNLAWLAG 230 DG S AT L + + G+S V + PI + G + G+ + LA L G Sbjct: 227 TAADGFSGATALSQW---AQGGNSALVNTVTGAPITWLDAFIGNIPGSIGEVSTLALLIG 283 Query: 231 GVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----HLLSGATMLGAFFI 286 +++ + W I ++ + + + L + +T A + HL+ G G FF+ Sbjct: 284 AAMIVYMRIASWRIIAGVMIGMIVVSTLFNVIGSDTNAMFSMPWHWHLVLGGFAFGMFFM 343 Query: 287 LTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPR 345 TDPV+AS TN+G+ +G L G + +IR YP+G+ A+L AN+ PL D+ + Sbjct: 344 ATDPVSASFTNKGKWWYGILIGAMCVMIRVVNPAYPEGMMLAILFANLFAPLFDHLVVEK 403 Query: 346 VYGHRK 351 R+ Sbjct: 404 NIKRRQ 409 >UniRef50_B9Y6Y9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Y9_9FIRM Length = 459 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 90/358 (25%), Positives = 155/358 (43%), Gaps = 55/358 (15%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFF--------GWGTLVQILLASV 52 M F SP + + T RIM + L + A L+++ G ++ ++ A V Sbjct: 1 MKFNFKPSPNYRDGQSTGRIMGELTLGLLAVFAFSLYYYFTNFSASYGLRAILLMITAIV 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 SA E L K+ + +LK++ +T ++L + P ++ + + TV A+ K + Sbjct: 61 SACGTEILWCVFTKKDILNSLKNSYPWVTAIILTMMCPLSIEYYALAVATVIAIFFGKLV 120 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGD 172 +GG GQN FNPA +G + SF + Sbjct: 121 FGGFGQNIFNPAAVGRATIFASFAGAAAA------------------------------- 149 Query: 173 MNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQY--------PIYSGILAGAGWQWVN 224 D ++ ATP + +S E + + ++ G+ GA + Sbjct: 150 --------DIVTGATPTSSMAAQNWIINSAEGMSSFLKPFGGLGNMFVGLYPGAIGETSA 201 Query: 225 LAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAF 284 L L GV L +K I W +P ++L+TL + A L ++ HLL+G M GA Sbjct: 202 LVILVVGVILAIRKVIDWRVPATYLITLFVLAAGVGLMHGAPISYALFHLLTGGAMFGAV 261 Query: 285 FILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYT 342 F++TDPVT T+ GR++F ++ ++R P+GV +++L+ N+ PLI+ T Sbjct: 262 FMMTDPVTNPTSAAGRIMFAVGCAVITIVLRLRSNLPEGVMYSILIMNMLTPLIESLT 319 >UniRef50_C1I7V3 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7V3_9CLOT Length = 299 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 65/341 (19%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +I+ +P+ ++IML ++A +P + A ++F+ + I+ V++++AE L K Sbjct: 10 KISPAPHVKKGLGINKIMLDFIIALIPAVFAGVYFYKIDAVKVIVATVVTSIIAEGLWNK 69 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 K++ + L D S ++ G++LA+ +P P W+ ++G++FA I+ KQ +GGLGQN NP Sbjct: 70 FVKKT--SFLTDLSPIVLGIILALIMPTYIPLWIPIIGSIFATIVVKQFFGGLGQNFMNP 127 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A L+ SW G M Sbjct: 128 AAATKAFLI-------ASW---------------------------AGVM---------- 143 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLA---GGVWLLWQKAI 240 A P T TS +G S E ++ P+ I+ A ++ LA GG++L+ + I Sbjct: 144 --AKP-ATDATSAASG-SAEVVV--PLIDKIIGQANGSIGEVSILALCIGGLYLVLRGRI 197 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 P++F+V+ AM+ + + L LL GA + A F+ TD T T G+ Sbjct: 198 SLRGPIAFIVS----AMIMYNIFEKDL------LLPGAFFVSAIFMTTDYGTTPMTKIGQ 247 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 IFG +AG+ +I G P+G +A++++N+ PLI+Y+ Sbjct: 248 YIFGIIAGVCAAIIAVKGFNPEGPYYAIIISNLFTPLIEYF 288 >UniRef50_A4SQL9 Na(+)-translocating NADH-quinone reductase subunit B n=3 Tax=Proteobacteria RepID=A4SQL9_AERS4 Length = 409 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 46/293 (15%) Query: 58 EALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLG 117 E L +RK + + +T +L A+ +PP P W LG F V++AK+++GG G Sbjct: 140 EVLFAMVRKHEI-----NEGFFVTSILFALIVPPALPLWQAALGITFGVVLAKEVFGGTG 194 Query: 118 QNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLR 177 +N NPA+ G L ++P Q++ DA+ V Sbjct: 195 KNFLNPALAGRAFLFFAYPGQISG---------------DAVWV---------------- 223 Query: 178 LGIDGISQATPLDTF----KTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVW 233 +DG S AT L + + ++ G + + I + G L G+ + L L G Sbjct: 224 -AVDGYSGATALSQWAQGGQMALINGATGQTISWMDAFLGNLPGSIGEVSTLMILIGAAM 282 Query: 234 LLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----HLLSGATMLGAFFILTD 289 +++ + W I ++ + ++L + +T + HL+ G G F+ TD Sbjct: 283 IVYMRIASWRIIAGVMIGMVATSLLFNVIGSDTNPMFNMPWHWHLVLGGFAFGMAFMATD 342 Query: 290 PVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYY 341 PV+A+ TN+G+ +GAL G++V LIR +P+G+ A+L AN+ PL D++ Sbjct: 343 PVSAAFTNKGKWWYGALIGVMVVLIRVVNPAFPEGMMLAILFANLFAPLFDHF 395 >UniRef50_C0EE37 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE37_9CLOT Length = 328 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 87/341 (25%), Positives = 155/341 (45%), Gaps = 49/341 (14%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL-- 64 +P+ + Q S ML+ LLA ++F+G ++ + A++++L+ E K+ Sbjct: 2 KAPFQTTKSQRSD-MLITLLAV---FVLPIYFYGLRVVIMLGFAALTSLVIEFAAQKIFS 57 Query: 65 --RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 RKQ A D+++L+T ++ + + AP W+V + ++II K +GG G+N FN Sbjct: 58 SKRKQKFA---YDSTSLITAMICTLLLSAAAPHWLVCVAVALSLIIGKYPFGGTGKNIFN 114 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA IG + + +P S+ PH V++P F D + + + +LG+ G Sbjct: 115 PAAIGLSFVGLCWPELTFSYPSPH---VSLPLFGDVMVPLVNS--------PEYQLGMGG 163 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + Q +D G AG V + A GV++L +++I+ Sbjct: 164 VPQIRAMDALL-------------------GQFAGPIGATVAIVLFACGVYMLIRRSIKI 204 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQ----IHLLSGATMLGAFFILTDPVTASTTNR 298 +IP + L+T ++ ++L P P +SG + G+ F+ DP T + Sbjct: 205 YIPAALLITTSVISLL----VPRIHTTPSHILMFEFISGVLLFGSVFMANDPSTIPRSRL 260 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLID 339 G++ FG G L + FG +A+L+AN L D Sbjct: 261 GQVYFGVFLGFFTMLFKYFGINEFDFIYALLIANAMSDLCD 301 >UniRef50_A7HKQ1 NQR2 and RnfD family protein n=5 Tax=Thermotogaceae RepID=A7HKQ1_FERNB Length = 313 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 47/296 (15%) Query: 53 SALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 + + E L K +++ V+ + L+T +L +S+PP P+W+ ++G F V K++ Sbjct: 47 TGVFVEYLFEKQKRKPVS-----EAVLVTCMLFLLSLPPNTPFWVAMIGIAFGVAFGKEV 101 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMT-SWLPPHEIAVNIPGFIDAIQVIFSGHTASGG 171 YGG G+N FNPA++G + + I+FP MT W+ P Sbjct: 102 YGGFGRNIFNPAIVGRLFIYITFPNYMTMGWVKPS------------------------- 136 Query: 172 DMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGG 231 G D +S ATPL +R G S+ + + +G AG+ + L LA Sbjct: 137 -----LFGTDAVSSATPLAL----MRQGESLNVL---NLLTGWRAGSIGEGPILIILAAA 184 Query: 232 VWLLWQKAIRWHIPLS-FLVTLALCAMLGWLFSPETLAAPQI-HLLSGATMLGAFFILTD 289 V+L+ K W + +S + AL +L P+ L P I +LSG+ + + F+ T+ Sbjct: 185 VYLIVTKTASWRLMISTYFSAAALTFLLDVFNVPKAL--PTIPAILSGSLVFISVFMATE 242 Query: 290 PVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPR 345 P+TA R + I+G + G +IR+F + +G +FA+L+ N+ PL+D + + Sbjct: 243 PITAPKKIRSQWIYGIIIGTTGVIIRTFSLFSEGWSFAILMGNLFAPLLDEVIKDK 298 >UniRef50_Q1K3T0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3T0_DESAC Length = 387 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 70/379 (18%) Query: 7 SSPYTH--NQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---TLVQILLA----------S 51 ++ YTH + R+M +++LA +P I +W G+ TL Q+L A Sbjct: 38 TTGYTHVRDSINHKRVMSVIMLALLPCIFMAMWNSGYQENLTLNQMLAAGQIDALPGFSD 97 Query: 52 VSALLAEAL----------VLKLRKQSV-----AATLK---DNSALLTGLLLAVSIPPLA 93 S++LA L ++ + Q+V AA K D L+T L+A+ +PP Sbjct: 98 SSSVLANVLTGAGMLLPVFLVAIITQAVWVVVFAAMRKKTIDAGFLVTAALIALLMPPTV 157 Query: 94 PWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIP 153 P W V + T F V+I ++++GG+G N NPA++ +V L ++ P M+ Sbjct: 158 PLWQVAIATSFGVVIGREVFGGIGMNFLNPALVAWVFLSLAHPTSMSG------------ 205 Query: 154 GFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSG 213 DA+ +DG + ATPL + A + + I + G Sbjct: 206 ---DAVWT-----------------AVDGYTGATPLAMALSDGTASLAAQGITWKSAFLG 245 Query: 214 ILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIH 273 + G+ + LA L G LL W I S ++ + + L +F + P H Sbjct: 246 TIPGSMGETSALACLFGAAILLISGIASWRIMASVVLGVIALSSLLCMFDSNAM-NPAWH 304 Query: 274 LLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG-YPDGVAFAVLLAN 332 L+ G G F+ TD +A+ T +G+ I+G L G+LV +R + P+ V +L N Sbjct: 305 LVLGGLAFGTVFLATDHSSAAMTTKGQWIYGILIGVLVVAVRVYNPMMPESVGMIILFGN 364 Query: 333 ITVPLIDYYTRPRVYGHRK 351 + PLID R V H K Sbjct: 365 VAAPLID---RLIVNAHIK 380 >UniRef50_D1AFF8 NQR2 and RnfD family protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AFF8_SEBTE Length = 362 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 96/351 (27%), Positives = 168/351 (47%), Gaps = 58/351 (16%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL--VLKLR 65 +PY ++M V+LA P I +G L+ + +S +LAE L + L+ Sbjct: 9 NPYIRTNDNVGKVMGDVILALFPCILVTFPAYGIRPLLLCTVCVLSTVLAEWLFSMFFLK 68 Query: 66 KQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAM 125 K++ ++ D SA++TG+LL+ ++ P P ++ G AVI K GGLG+N FNPA+ Sbjct: 69 KKN---SVNDLSAVVTGILLSFTLAPFTPLYIAAFGGAAAVIFGKIAVGGLGRNIFNPAL 125 Query: 126 IGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQ 185 +G + + FP M S + ++ +I+ I+ ++ G S Sbjct: 126 LGREFMTVFFPAAMGSGMIWGNESLLKYKYIEIIK------SSEPG------------SW 167 Query: 186 ATPLD-TFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 A LD F T+ A I +Y I+ +LA AGG++L++++ I WHI Sbjct: 168 AEYLDRIFFTASGA------IGEYSIF--LLA------------AGGIYLIYRERITWHI 207 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P S + + LG + T I + G +LG ++ TD T++TT ++ +G Sbjct: 208 PFSMFIVI----FLG--ITVFTFLGFDIKIALGGLILGGIYMATDMPTSTTTPAAKIYYG 261 Query: 305 ALAG---LLVWLIR-SFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + G +L W+ R F + +++++L+ N+ +D RPRV+G + Sbjct: 262 CMIGVSVILCWMSRIEF----ETLSYSILIMNVFKNPVDSLCRPRVFGTER 308 >UniRef50_C0BFX7 NADH:ubiquinone oxidoreductase, subunit B n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BFX7_9BACT Length = 386 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 38/271 (14%) Query: 75 DNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLIS 134 + L+TGLL+ + +P P WMV + T FAV+IAK+ +GG G N NPA+ + Sbjct: 128 NEGYLVTGLLIPMIMPVDIPLWMVAVSTAFAVLIAKEAFGGTGMNILNPALTARAFAFFA 187 Query: 135 FPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKT 194 +P M+ +++ V+ +DAI SG T G Sbjct: 188 YPTYMSG----NKVWVSEASNVDAI----SGETILG------------------------ 215 Query: 195 SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI-RWHIPLSFLVTLA 253 ++ AG V M + ++ G + G+ + L W+A G +L + W I ++ A Sbjct: 216 TLAAGGEVNYSM-FEMFQGAIPGSIAETSTL-WVAVGALILILTGVGSWRIITGGILGAA 273 Query: 254 LCAMLGWLFSPETLAAPQ--IHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLV 311 + +L L+ L + HL+ G G F+ TDPV+ + TN+G+ I+G L G+ Sbjct: 274 VMGLLFNLWGANALMSFSWINHLVVGGFAFGIVFMATDPVSGAQTNKGKWIYGILVGIFC 333 Query: 312 WLIRSFG-GYPDGVAFAVLLANITVPLIDYY 341 +IR F YP+GV A+LL N+ P ID+Y Sbjct: 334 IMIRVFNPAYPEGVMLAILLMNVFAPTIDHY 364 >UniRef50_A6WSA0 NADH:ubiquinone oxidoreductase, subunit B n=20 Tax=Shewanella RepID=A6WSA0_SHEB8 Length = 416 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 137/309 (44%), Gaps = 58/309 (18%) Query: 48 LLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVI 107 L A +++L E + ++R Q + +T LL + +P P W+V +G F V+ Sbjct: 134 LTALLTSLFWEVVFARVRGQEL-----HEGFFVTALLFTLILPVSTPLWLVAMGISFGVV 188 Query: 108 IAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHT 167 +AK+L+GG+G N NPA+ G + ++P ++ + I+ + Sbjct: 189 VAKELFGGMGYNFLNPALAGLAFIYFAYPSEVAT-----------------IKQL----- 226 Query: 168 ASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH-SVEQIMQYPIYS---------GILAG 217 + +DG S AT L AG S + +S G G Sbjct: 227 ----------VAVDGFSGATAL----AQTAAGKLSFADYAWFSAFSDPNWWNNFFGFTVG 272 Query: 218 AGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLV----TLALCAMLGWLFSPETLAAPQI- 272 A + LA L GG LL + W I L L+ T LC +G S + +A P Sbjct: 273 AIGETSTLAILIGGSLLLISRLADWRIVLGVLLGMIATATLCNYIGSS-SNDMMAMPWTW 331 Query: 273 HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLA 331 HL++G L F+ TDPVT S T +G+ +GAL G + LIR P+GV A+L A Sbjct: 332 HLVTGGFALAMMFMATDPVTTSYTRQGKFAYGALIGFMTVLIRVANPKMPEGVMLAILFA 391 Query: 332 NITVPLIDY 340 N+ PL DY Sbjct: 392 NLWAPLFDY 400 >UniRef50_A4CPG2 Na(+)-translocating NADH-quinone reductase subunit B n=20 Tax=Bacteria RepID=A4CPG2_9FLAO Length = 425 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 44/281 (15%) Query: 75 DNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLIS 134 + L+TG+L+ + +P P WM+ + VF V+I K+++GG G N NPA+ L + Sbjct: 140 EEGYLVTGMLVPLIVPVDTPLWMLAVAVVFGVVIGKEVFGGTGMNILNPALTIRAFLFFA 199 Query: 135 FPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI-DGISQATPLDTFK 193 +P +W+ ++ V+ +A++ R G D IS T L + Sbjct: 200 YP----TWMSGDKVWVH-----EAVE----------------RAGTADAISGETILGSLA 234 Query: 194 TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 + G+S ++ G + G+ + L GG++L++ + W I LS ++ Sbjct: 235 QNAEHGYSTAD-----MFFGFIPGSVGETSAFLILLGGLFLVFSRIASWRIMLSAVIGAL 289 Query: 254 LCAML-------GWLFSPE---TLAAPQI--HLLSGATMLGAFFILTDPVTASTTNRGRL 301 + ++ GW+ +L + + HL+ G G ++ TDPVT S TNRG+ Sbjct: 290 VMGLIFNGVADAGWVTESSRFYSLMSFEFWQHLIVGGLAFGIVYMATDPVTGSQTNRGKW 349 Query: 302 IFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYY 341 ++G L G L +IR F YP+GV A+LL N+ P ID+Y Sbjct: 350 VYGFLIGFLSVMIRVFNPAYPEGVFLAILLMNVFAPTIDHY 390 >UniRef50_A6DRQ1 Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Bacteria RepID=A6DRQ1_9BACT Length = 387 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 94/324 (29%), Positives = 143/324 (44%), Gaps = 49/324 (15%) Query: 26 LAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLL 85 + A+PG+ + + + IL ++ + E + +RK + + L+TG+L+ Sbjct: 90 IEALPGMVDMIVYGAIMVVPVILTVYITGGIIEGIFACIRKHEI-----NEGFLVTGILI 144 Query: 86 AVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPP 145 A+ +P P W V L T F V I K+ +GG G N NPAM L +FP Q++ Sbjct: 145 AMVVPASIPLWQVSLATAFGVFIGKECFGGTGMNILNPAMTARAFLFFNFPSQISG---- 200 Query: 146 HEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQI 205 D + V F G + ++ ATP+ + + Sbjct: 201 -----------DKVWVGFD-------------RGQEVVATATPMGL---AAKGDEITWST 233 Query: 206 MQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFS-- 263 M ++ G + G+ + LA + GG+ LL W L LV L A WL S Sbjct: 234 MD--MFLGFIPGSIGETSTLACIIGGIILLITGVASWRTMLGMLVGGFLFA---WLISLG 288 Query: 264 ---PETLAA--PQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG 318 P +AA HL G G F+ TDPV+++ T+ G+ I+G AG + L R Sbjct: 289 STNPNDIAALGAVKHLCMGGFAFGLVFMATDPVSSANTDLGKWIYGFGAGAMSMLFRIIN 348 Query: 319 -GYPDGVAFAVLLANITVPLIDYY 341 YP+GV AVLL N+ PLID+Y Sbjct: 349 PAYPEGVMLAVLLMNVFAPLIDHY 372 >UniRef50_A1ZH15 NADH:ubiquinone oxidoreductase, na(+)-translocating, b subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZH15_9SPHI Length = 456 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/314 (29%), Positives = 136/314 (43%), Gaps = 51/314 (16%) Query: 75 DNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLIS 134 + L++G+L+ + +P P W V L + FAVIIAK+++GG G N N AM L + Sbjct: 129 NEGYLVSGMLIPLILPVTIPLWQVALASAFAVIIAKEVFGGTGMNILNVAMTARAFLYFA 188 Query: 135 FPVQMTSWL------PPHEIAVNIPGFIDAIQVIFSGHTASG--GDMNTLRLG-IDG-IS 184 +P M + P I + G+ A + + +S ++ R +D + Sbjct: 189 YPTYMAGDIKVWTAGEPTVIEQKLDGYTRATALGLAAEQSSNLAAEIQNAREAYVDKKVK 248 Query: 185 QATPLDTFKTSVRAGHSV--------------EQIMQY----------PIYS------GI 214 +A K V + EQI + IYS G Sbjct: 249 EAETKGEIKDPVAFNQKMYKEADNLPEVKKLKEQIPSHVTNAFESKKGGIYSLKSFVIGT 308 Query: 215 LAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS-----FLVTLALCAMLGWLFSPETLAA 269 + G+ + L L GG+ L+ W I +S +L+ L A+ G F +A Sbjct: 309 IPGSIGETSFLMCLIGGIILILTGVGSWKIIVSAFGGAYLMGLLFNAIGGNAF----MAM 364 Query: 270 P-QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFA 327 P HL+ G G F+ TDPVTA+ T G+ +G L G L LIR F YP+G+ Sbjct: 365 PAHYHLVMGGLAFGIVFMATDPVTAAQTEIGKWYYGFLIGALTVLIRVFNPAYPEGIMLV 424 Query: 328 VLLANITVPLIDYY 341 VLL N+ PLIDYY Sbjct: 425 VLLMNVFAPLIDYY 438 >UniRef50_C3X8F5 Electron transport complex n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8F5_OXAFO Length = 337 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 55/329 (16%) Query: 24 VLLAAVPGIAAQLWF-FGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTG 82 VL A +P + W FG ++ IL+A SA+ E L +L A +L D SAL+TG Sbjct: 4 VLFALLP-VCFMAWLAFGMEPVMVILVACGSAVATEFLFSRLYVGKTA-SLSDGSALVTG 61 Query: 83 LLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSW 142 LLA ++ P P ++V G AV+ K L GGLG+N FNPA++G MT + Sbjct: 62 TLLACTLAPFTPLYIVAFGGAMAVLFGKLLAGGLGRNRFNPALVGREF--------MTVF 113 Query: 143 LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSV 202 P + I DA+ H +S +D + DTF S+ Sbjct: 114 FPAIMTSGAIWYRYDAV------HVSS----------LDWLP-----DTFLDSL------ 146 Query: 203 EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLF 262 I+ G +GA ++ + + GGV+LL + I WHIP++ V+ + ML Sbjct: 147 -------IFRG--SGAIGEYSVVLLVLGGVYLLLKNRISWHIPVALTVSFTVLFML---- 193 Query: 263 SPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPD 322 L + +LGA F+ TD T+S+T GRL +GA+ G + + +FG + Sbjct: 194 ----LPDGEYRFSLAGVLLGAIFMATDMPTSSSTFIGRLYYGAMIGAVAVMCIAFGVKHE 249 Query: 323 GVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +++++LL N V +D+ RPRV+G + Sbjct: 250 YMSYSILLLNAFVVPVDWVFRPRVWGGKN 278 >UniRef50_A9NGU6 Na+-transporting NADH:ubiquinone oxidoreductase subunit B n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU6_ACHLI Length = 315 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 154/351 (43%), Gaps = 65/351 (18%) Query: 13 NQRQTSRIM----LLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQS 68 N+ Q SRI L +LL A I FG + LA +++ + E L K RK+ Sbjct: 2 NKSQQSRIFVASALFILLIAASFI------FGATVFIVGALAILTSFVVEILSTKARKE- 54 Query: 69 VAATLKDNSALLTGLLLAVSIPP--LAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 T S +T L++ + P + WMV + T F V AK ++GG +N FNPAM+ Sbjct: 55 ---TFDWTSFWITPLVITLLTTPTIIDQVWMVSIATAFGVFFAKSIWGGQDKNVFNPAMV 111 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 G + + ++FP+ + ++L P + G++ Sbjct: 112 GLIFIALAFPIYVNNFLEP----------------------------------VSGLASP 137 Query: 187 TPLDT-FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIP 245 L T FK S G + + + G AGA L + G+ ++ + W IP Sbjct: 138 QTLATIFKNS--PGQIMTTYSLWDVLLGNYAGAIGTTFKLGIIILGLLMMVVRISDWRIP 195 Query: 246 LSFLVTLALCAMLGWLFSPETLAAPQIH----LLSGATMLGAFFILTDPVTASTTNRGRL 301 L+F+ T + +++ +T P ++ +L G M F+ TDP TA N+G+ Sbjct: 196 LTFVGTYFVLSLINGF--TKTGVNPFMYATYSILMGHLMFAVMFVSTDPQTAPLYNKGKF 253 Query: 302 IFGALAGLLVWLIRSFGGY------PDGVAFAVLLANITVPLIDYYTRPRV 346 I+G G + W+I++ + +G+ ++V N V LID +T P+V Sbjct: 254 IYGIGLGFITWIIQNIWVFNPLAPNTEGIIYSVTFMNAVVGLIDVWTVPKV 304 >UniRef50_C9N0N0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N0N0_9FUSO Length = 425 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 83/351 (23%), Positives = 164/351 (46%), Gaps = 57/351 (16%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL--V 61 +++ +PY + T +M V+++ +P I A +G L+ I+ + SA++ E L + Sbjct: 66 KLSFTPYIRTEVDTRSVMKDVIISLIPAIVAASLVYGAKALLVIVTSIFSAVVTEKLFSI 125 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + L + A D SA++TG+L+A+++ PL +V G A+I K +YGG+G+N Sbjct: 126 IFLNDKDSA---HDLSAVITGILMALTLAPLTSLPVVAFGASMAIIFGKLMYGGIGKNVL 182 Query: 122 NPAMIGYVVLLISFPVQMTS---WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRL 178 NPA++G + + FP M+S W + ++ F V F Sbjct: 183 NPAVVGREFMTVFFPAAMSSGTIWFSQEALRLSKINFF----VNF--------------- 223 Query: 179 GIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 Q TP+ ++ +++++ +G+ + + GG++LL + Sbjct: 224 ------QKTPIMSY---------LDELLLTS------SGSLGSYSAFVLILGGLYLLLKN 262 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I WHIP++ T + AM + I + +G +L F+ TD T+ + Sbjct: 263 RISWHIPVTLFATSFIAAM---------VLKDGISVSTGGLLLTGIFMATDMPTSPSFAG 313 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G++ +G + G+++ L+ G + +++ +L+ N I+ RP V+G+ Sbjct: 314 GKIYYGIMLGVVIALLSVLGVKNETLSYVLLILNPFTRFINKVFRPVVFGY 364 >UniRef50_UPI0001698867 electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698867 Length = 194 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 + ++P+ H +IM V+ A +P +W FG L +L ++S LL E L + Sbjct: 8 ELRTTPHAHAADDVVKIMRNVVYALLPITIWSVWQFGLSALALLLTVTLSCLLFERLFNQ 67 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 +R + ++L D SA +TGLLLA+++PP P WM V+ A+ + K L+GGLG N NP Sbjct: 68 MRGEP--SSLGDWSATITGLLLALTLPPGFPLWMGVVAAFAAIALGKALFGGLGMNVLNP 125 Query: 124 AMIGYVVLLISFPV 137 A++G + +FPV Sbjct: 126 ALVGRAFVQAAFPV 139 >UniRef50_A8S6D0 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D0_9FIRM Length = 339 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 149/352 (42%), Gaps = 60/352 (17%) Query: 15 RQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLK 74 ++T R V VP + +F+G L+ +A ++ L + LV LR + T + Sbjct: 14 QKTGRYYKHVFWLCVPLLCMACYFYGARPLLLCGIALLTGNLCDRLVALLRHR--VYTNR 71 Query: 75 DNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLIS 134 D S L++A+ +P +++V+ + V+I K+++GG G PFNPA +GY V +S Sbjct: 72 DFSNESFSLIIALLMPATVDIYVLVVAVLAGVLIGKEVFGGYGSYPFNPAAVGYAVAAVS 131 Query: 135 FPVQMTSWLPPHE-----IAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPL 189 +P Q+ + P+ A +P + SGG +N L + A P+ Sbjct: 132 WPEQVVRYPQPYTPLPLWNASAVP-----VSSTIEDTLRSGGILNLNALAVVLGEFAAPM 186 Query: 190 DTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFL 249 T GA L LA G+ L QK + SFL Sbjct: 187 GT-------------------------GAA-----LVILACGLVLWTQKDVHIGASASFL 216 Query: 250 VTLALCAMLGWLFSPET--------------LAAPQIHLLSGATMLGAFFILTDPVTAST 295 +T C ++ + F + L + L +GA + A F+L +P T + Sbjct: 217 IT---CGLIAFFFPRQVGLADSTLFSSLLPRLQGIRDELHTGAVLFCAVFLLNEPYTCAH 273 Query: 296 TNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVY 347 GR+++GAL G R FG Y GV FA+L N LID T R+Y Sbjct: 274 HRLGRILYGALVGAATMGFRYFGVYETGVCFALLAVNSVSALID-RTEERLY 324 >UniRef50_C7NCF4 NQR2 and RnfD family protein n=2 Tax=Leptotrichia RepID=C7NCF4_LEPBD Length = 367 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 1/138 (0%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +I+ +PY + IM V++A P I A +G L+ I ++ +SA+ E + + Sbjct: 12 KISFTPYIRTEVDVRNIMKDVIIALFPAIIASWLVYGIRALLVIAVSVLSAVWTEKIFSR 71 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + +T ++ SA++TG+LLA+++ P +V G A+I K +YG +G+N FNP Sbjct: 72 VFLNDSEST-QNLSAIITGILLALTLAPFTSLPVVAFGASMAIIFGKLMYGRIGKNIFNP 130 Query: 124 AMIGYVVLLISFPVQMTS 141 A++G + + FPV M+S Sbjct: 131 AVVGREFMTVFFPVAMSS 148 Score = 41.2 bits (95), Expect = 0.062, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 9/113 (7%) Query: 237 QKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTT 296 + I WHIP+S T L M I + G +L F+ TD T+ + Sbjct: 207 KNRISWHIPVSLFATAFLATM---------FLKDGISVSIGGVLLIGIFMATDMPTSPMS 257 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G++ +G + G ++ L+ G + +++ +L+ N +I+ RP V+G+ Sbjct: 258 PAGKVYYGVMLGAVIVLLTMLGIKNETLSYVLLILNPFAKIINKVFRPVVFGY 310 >UniRef50_C7NE07 NADH:ubiquinone oxidoreductase subunit RnfD-like protein n=2 Tax=Leptotrichia RepID=C7NE07_LEPBD Length = 345 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 57/342 (16%) Query: 12 HNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAA 71 Q ++ + +L++ +P + + ++ ILL+ +A L + ++ L Q Sbjct: 8 KQQENIAKTNIDILISLIPMLLVAFAAYEVTPVLVILLSIAAAELVD-IIFSLILQKNKE 66 Query: 72 TLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVL 131 TLKD S + G L + P P ++ A + K +YGG+ + FNP + G + + Sbjct: 67 TLKDLSGINIGALTGFVLAPFTPLYVAAFAGAMATLFGKVMYGGIDKKVFNPVIWGKLFV 126 Query: 132 LISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDT 191 L FP + L P+ A P D Sbjct: 127 LTFFP----AVLAPNSSAWTNP------------------------------------DI 146 Query: 192 FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 FK E++ + I G + +A + G ++LL++ I WHIP+SF +T Sbjct: 147 FKLPS------EEVTGLTSFLVINKGIIGELSIIAMILGAIYLLFRSRITWHIPVSFFIT 200 Query: 252 LALCAMLGWLFSPETLAAPQIHLLS--GATMLGAFFILTDPVTASTTNRGRLIFGALAGL 309 + G+ + I++++ G + F+LTD T G++ FG LAGL Sbjct: 201 I----FFGYYIASNN----NINVVTTLGEIIFMGIFVLTDSFTTPQHGFGKVFFGFLAGL 252 Query: 310 LVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + G + + ++VL+ N I+ +P V+G K Sbjct: 253 STIIFWFLGIQTEAIIYSVLILNPFTRPINTIFKPNVFGDEK 294 >UniRef50_Q12W78 Electron transport complex protein rnfD n=2 Tax=Methanosarcinaceae RepID=Q12W78_METBU Length = 309 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 2/131 (1%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F I++ P+ +IM +LA +P + ++ FG + + + +A+ EA Sbjct: 1 MTFTISAPPHKKENITFKKIMWAKVLALMPVVLLSVYLFGLPAIGLVAASIFAAIATEAT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 + K Q + T+ D A+L GL++A+ IPP P W+ ++GTVFAV I K +GG+G Sbjct: 61 IQKAFGQKI--TIADGHAVLIGLMVAMIIPPEVPLWIPMIGTVFAVGIGKHAFGGIGSYV 118 Query: 121 FNPAMIGYVVL 131 FNP + ++ L Sbjct: 119 FNPVLAAWLFL 129 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 12/139 (8%) Query: 212 SGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQ 271 +G++AG ++ LA G L++++ I W IP++F VT L A L L Sbjct: 157 AGVMAGVSPFFILLA----GAVLIFRRYIEWRIPVTFFVTTVLLAFL--------LGDSL 204 Query: 272 IHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLA 331 +++ G + G FI TD T+ TT GR+I+G + G+LV + F Y DG + + LA Sbjct: 205 SYVVLGVVVFGVLFIATDTSTSPTTKNGRVIYGIVCGVLVVVYGHFANYVDGTFYGLFLA 264 Query: 332 NITVPLIDYYTRPRVYGHR 350 N LID T P YG Sbjct: 265 NCVASLIDNNTLPASYGTE 283 >UniRef50_UPI00016996B3 hypothetical protein Epers_17019 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016996B3 Length = 89 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 39/74 (52%), Positives = 52/74 (70%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 ML V+LA +PGI A + FFGWG L+ ++A SALL EAL L+LRK+ V L D SA++ Sbjct: 1 MLQVVLALLPGILAMVIFFGWGVLINSVIAIASALLFEALALRLRKRPVTPALMDLSAVV 60 Query: 81 TGLLLAVSIPPLAP 94 T +L A++ PPL P Sbjct: 61 TAMLFAIAAPPLLP 74 >UniRef50_Q3KM84 Na(+)-translocating NADH-quinone reductase subunit B n=14 Tax=Chlamydiales RepID=NQRB_CHLTA Length = 503 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 49/179 (27%) Query: 6 ASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLV-------------------- 45 +S P+ + R M+LV++A +P I A +W G LV Sbjct: 40 SSPPFVRDAVDVKRWMMLVVIALMPTIFAAVWNSGLQALVYQSSDPRIMEAFLHISGFKS 99 Query: 46 ------------QILLASVSALL------------AEALVLKLRKQSVAATLKDNSALLT 81 +L A L E L +RK +A L L+T Sbjct: 100 YFSFVSQEIGIGSVLFAGCKIFLPLLFISYAVGGTCEVLFAIIRKHKIAEGL-----LVT 154 Query: 82 GLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 G+L + +PP P+WM LG F V++ K+L+GG G N NPA+ G L +FP +M+ Sbjct: 155 GMLYPLILPPTIPYWMAALGIAFGVVMGKELFGGTGMNILNPALTGRAFLFFTFPAKMS 213 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 273 HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLA 331 HL G G F+ TDPV++ + ++GA G L LIR YP+GV A+LL Sbjct: 424 HLCIGGLAFGLVFMATDPVSSPAMKLAKWLYGAFIGFLTILIRLINPAYPEGVMLAILLG 483 Query: 332 NITVPLID 339 N+ PL D Sbjct: 484 NVFAPLFD 491 >UniRef50_Q73MW5 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema denticola RepID=Q73MW5_TREDE Length = 344 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 46/312 (14%) Query: 44 LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTV 103 L+ I++A + L E L+ L +L+ +++GLL+ +P + V + + Sbjct: 48 LLNIVIAVMGVLFVENLLRYLASSKFGLSLE---MIISGLLIGFFMPTGIGFVFVFILSA 104 Query: 104 FAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIF 163 F+V I K ++GG G+N NP IS P + + F ++ Sbjct: 105 FSVFIVKTVFGGTGRNWLNPVAFAVCAAYISRPEAFPPLISDFSLLAEKGSFFAVMEA-- 162 Query: 164 SGHTASGGD------MNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAG 217 +G D +N++ L G+ P + + S+ +Y Sbjct: 163 NGLLKLKTDFTITSALNSILL--HGVGVTLPEGYISLFLNSTSSIPA-FRY--------- 210 Query: 218 AGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLF----------SPETL 267 N+ L + L +A+ + +P FL T A +L W+F + + L Sbjct: 211 ------NIVTLVSSIILFSIRAVDYILPAFFLATYA---VLVWIFGMAPVSNIYFTGDIL 261 Query: 268 AAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFA 327 +A +L+G + AFF++T+P ++ T G+ + G G+ + I + G P G+ FA Sbjct: 262 SA----VLTGGILFAAFFVMTEPASSPKTKYGKAMIGFFTGVFAFFICAHGASPAGIFFA 317 Query: 328 VLLANITVPLID 339 ++L NI PLI+ Sbjct: 318 IILGNIISPLIE 329 >UniRef50_UPI0001698C61 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698C61 Length = 105 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%) Query: 202 VEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWL 261 + +IMQ P++ G G GW+WV ++ GG+WL++++ I WHIPLS L A+L +L Sbjct: 2 ISEIMQNPLW-GDFGGQGWEWVGNWFIMGGLWLIYKRVISWHIPLSLFAGLFSLALLFYL 60 Query: 262 FSPETLAAPQIHLLSGAT 279 F PE+ P H+ SG Sbjct: 61 FDPESHPFPLFHIFSGGV 78 >UniRef50_B0MP93 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP93_9FIRM Length = 438 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 34/296 (11%) Query: 37 WFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWW 96 F+G + + ++ +L + + L K+ +KD S + G+ LA+ +P ++ Sbjct: 52 CFYGMRVVTVCACSVLACILTDMVGCFLSKKEYG--VKDLSTIAYGMALALMLPASVEYY 109 Query: 97 MVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFI 156 +V++G V A+ + K ++GG FNPA + L+I +P Q+ + P + Sbjct: 110 VVIIGAVLAITV-KHIFGGKDNYIFNPAAVAIAFLIICYPTQVLMY--PQ---------L 157 Query: 157 DAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILA 216 DA IF GD TL GI+ +S ++ + I G Sbjct: 158 DAHPEIF-------GDAGTLVSGIE------------SSFIKNGAMPSLTPLEILMGRFP 198 Query: 217 GAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLS 276 G L + G+ L+ ++++ + + + + + L P + A +S Sbjct: 199 GPMGTTHILVLIVSGICLICRRSVSLSATVGGIAVMGVLSYLTSSVEP-AMDAVIFRFIS 257 Query: 277 GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLAN 332 G + G F+ +DP T TN GR+++G G++ + R+ F++L+ N Sbjct: 258 GFVLFGFIFLASDPQTLPFTNGGRVLYGIALGVITVIFRNSANIEGIFVFSLLIVN 313 >UniRef50_A8RDS0 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RDS0_9FIRM Length = 502 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 8/123 (6%) Query: 237 QKAIRWHIPLSFLVTLALCAMLGWLFS--------PETLAAPQIHLLSGATMLGAFFILT 288 +K I W IP +L ++ + LF P + P +H+L+G + GA F+LT Sbjct: 221 RKVIDWRIPTIYLGSIFVLTAAIALFRGVGSYGNLPGFIWYPLVHVLTGGVVFGAVFMLT 280 Query: 289 DPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 DPVT+ T+ +G+ IF A ++ LIR P+G +++L+ N+ P+I+ + Sbjct: 281 DPVTSPTSAQGKTIFALGAAIITVLIRIKANLPEGCLYSILMMNMLTPMIERALDGKQLA 340 Query: 349 HRK 351 RK Sbjct: 341 LRK 343 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 15/143 (10%) Query: 8 SPYTHNQRQTSRIMLLVLLA--AVPGIAAQLWFFGWG------TLVQILLASVSALLAEA 59 SP ++ T +IML + +A V G + +F +G LV + + ++AL+ E Sbjct: 8 SPNLRQKQSTQKIMLELTIALLIVFGFSLAYYFQAYGMDYVIRALVLMACSVLTALVTEV 67 Query: 60 LVLKLRKQSVAATLKD-----NSAL--LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 K+ V LK NS+ +T ++L + P + +++ T ++ K L Sbjct: 68 AFAFFMKKGVKFDLKYVGKFLNSSFGWITAIILVLMTPISIRPFALIVSTFLCILFGKLL 127 Query: 113 YGGLGQNPFNPAMIGYVVLLISF 135 +GG G N FNPA +G ++ +F Sbjct: 128 FGGFGNNIFNPAAVGRAIIFATF 150 >UniRef50_UPI00017427D7 electron transport complex protein RnfC n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427D7 Length = 501 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 5/113 (4%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK--LR 65 +PY + + IM V+++ P I A +G L+ I + +SA++ E L K L Sbjct: 386 TPYIRTEIEVRNIMKDVIISLFPAIIASALVYGTRALLLIAFSVLSAVVTEKLFSKYFLN 445 Query: 66 KQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQ 118 + ++ D SA++TG+LLA+++ PL P +V+ G AVI K +YGG+G+ Sbjct: 446 DNN---SVHDLSAVITGILLAMTLAPLTPLPIVIFGACMAVIFGKLIYGGIGK 495 >UniRef50_D1RAM2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAM2_9CHLA Length = 512 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Query: 263 SPETLAAPQI-HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GY 320 +P T P HLL G G F+ TDPV++ + + + I+G G++ LIR Y Sbjct: 415 APATFGFPAYKHLLLGGAAFGIVFMATDPVSSPSLDSAKWIYGLFCGIVTMLIRVVNPAY 474 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 P+GV A+L+ N+ PL DYY R Y R+ Sbjct: 475 PEGVMLAILMGNVFAPLFDYYA-ARFYRKRR 504 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%) Query: 41 WGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVL 100 + L Q L+A L E + +R+ ++ L+TG+L A+ +PP P+WM + Sbjct: 121 YALLPQALIAYAVGGLWEGIFACVRQHEISEGF-----LVTGILYALILPPTLPYWMTAV 175 Query: 101 GTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ 160 G +I AK+++GG G N NPA+ L ++P +M+ N+ DA + Sbjct: 176 GVSVGIIFAKEVFGGSGMNIVNPALACRAFLFFTYPGRMSG---------NVWVGTDATK 226 Query: 161 VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTS 195 V + + ++ +DG +QATPL F + Sbjct: 227 V---RESLIAMNQDSKASTLDGYTQATPLAKFNVT 258 >UniRef50_C8PP64 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PP64_9SPIO Length = 340 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 49/328 (14%) Query: 41 WGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVL 100 + ++ I+ + ++ LA LV ++ + + D AL+TGLL+ +P V Sbjct: 44 FASIFLIISSGAASTLAAFLVGYIQGKKIF----DIHALITGLLIGFFLP-------VNS 92 Query: 101 GTVFAVIIAKQLY-------GGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIP 153 G VF+ +IA Y GG G + NP M+ + + P E V Sbjct: 93 GFVFSFLIAFMSYFFSWGIFGGKGFSWVNPVMLAACIASVCKP----------EYFVQPV 142 Query: 154 GFIDAIQ--VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIY 211 GF + +F+ +SG + + +T L + ++ G+ + + +P Sbjct: 143 GFDRIVSGGSVFAAMESSGLLQTPADQYVTSMFNSTFLHSVGVTLPEGY-ISLFLHHP-- 199 Query: 212 SGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAML-------GWLFSP 264 S I A +++ NL L + LL K I +P +FL+ L L L Sbjct: 200 SAIPA---FRY-NLLTLGASIILLSAKTIHKTLPFTFLIVYGLLVYLFPSAGQANALGRG 255 Query: 265 ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGV 324 + L+A +L+ + AFF++ D + + GR + G L G+ + I G P G+ Sbjct: 256 DVLSA----ILTSGALFSAFFVMNDGGSTPRSWEGRCLTGILTGIFAFCITGPGAIPAGI 311 Query: 325 AFAVLLANITVPLIDYYTRPRVYGHRKG 352 FAVLLA+ PLI+ + Y R+G Sbjct: 312 PFAVLLADCINPLIE-WLESSFYKRRRG 338 >UniRef50_D1PJN0 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN0_9FIRM Length = 339 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 99/237 (41%), Gaps = 50/237 (21%) Query: 110 KQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTAS 169 K+ +GG G PF+PA +G V IS+P + + P +P F + + G A Sbjct: 102 KEAFGGEGHYPFHPAAVGMAVAGISWPDSVYRYPTP---GTWLPVFGASDGTLVEGMNA- 157 Query: 170 GGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLA 229 TLR G G+ A+ ++ +V G GI A L +A Sbjct: 158 -----TLRNG--GLPSASTMNLLTGNVSGG------------LGITAA-------LVVMA 191 Query: 230 GGVWLLWQKAIRWHIPLSFLVT-LALCAMLGWL---------FS-PETLAAPQIHL---- 274 G++LL +R HI LS L+ L C L WL FS P +I+L Sbjct: 192 CGLFLL----VRGHIRLSVLIPFLIFCIGLPWLLPQLSELPVFSWPWEYVRQRIYLEKYV 247 Query: 275 -LSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLL 330 LSG + G F++ +PVT R+++G G+ R F Y FA+L+ Sbjct: 248 ILSGTVLFGGLFLICEPVTMPNRTSSRIVYGTALGIATHAFRVFSPYESAACFALLI 304 >UniRef50_C0B3W9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B3W9_9ENTR Length = 67 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/47 (55%), Positives = 37/47 (78%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 ML V LAA+PGI +Q++FFG GT+ QI+LA + AL+ E L +KL+K+ Sbjct: 1 MLWVTLAALPGILSQIYFFGLGTIYQIVLAIIVALVTETLCVKLKKR 47 >UniRef50_UPI0001C372ED NADH:ubiquinone oxidoreductase, RnfD subunit-like protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372ED Length = 318 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 34 AQLWFFGWGT--LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPP 91 A + FF +GT LV ++ ++AL AE + L+L + + A D S L++A+ +P Sbjct: 19 ALMAFFYYGTHFLVTAVICVLTALAAEFVSLRLMHKKIDA--DDLSCTSDALIIALMMPA 76 Query: 92 LAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPH 146 + + L +F ++AK ++GG F+PA Y+ +L S+ + + PH Sbjct: 77 SINYLIAALAVIFGTVVAKDVFGGRQNMVFSPAAAAYIFVLTSWGRDLLMYPAPH 131 >UniRef50_A9D761 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D761_9RHIZ Length = 272 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Query: 281 LGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG---YPDGVAFAVLLANITVPL 337 G F++ DPV ++TN GR +G LAG L+ L + G P + FA LLA+I PL Sbjct: 195 FGLVFLVGDPVVTASTNPGRWAYGILAGGLIVLFDTISGPGVSPTAIVFAALLASIFAPL 254 Query: 338 IDYYTRPRVYGHRK 351 IDY HR+ Sbjct: 255 IDYLVVEWNVRHRR 268 >UniRef50_A7BVL8 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVL8_9GAMM Length = 267 Score = 40.4 bits (93), Expect = 0.097, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 26/144 (18%) Query: 214 ILAGAGW----QWVNLAWLA------GGVWLLWQKAIRWHIPLSFLV--TLALCAMLGWL 261 +L G W QW + A+L GG L+ +A R + L+FL T L W Sbjct: 122 LLTGQVWVSPGQWGSTAFLGFLIACLGG--LVLNRAARSDVTLAFLFFYTAILFGRALWF 179 Query: 262 FSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL----AGLL-VWLIRS 316 P T+ Q+ +GA +L AFF+++DP T + GR++ L AG + WL R+ Sbjct: 180 GDPLTIPLHQLE--NGALLLFAFFMISDPKTTPDSRAGRILLAFLVAVGAGFVHFWLYRT 237 Query: 317 FGGYPDGVAFAVLLANITVPLIDY 340 +GV +++ L + VPLID+ Sbjct: 238 -----NGVFWSLALFALFVPLIDW 256 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q15RL2 Electron transport complex protein rnfD n=81 Tax... 347 4e-94 UniRef50_Q482U6 Electron transport complex protein rnfD n=103 Ta... 339 7e-92 UniRef50_Q4QJQ5 Electron transport complex protein rnfD n=74 Tax... 321 2e-86 UniRef50_A0L5G5 Electron transport complex, RnfABCDGE type, D su... 318 3e-85 UniRef50_Q3A7W9 NADH:ubiquinone oxidoreductase, RnfD subunit-lik... 317 4e-85 UniRef50_Q31GU5 NADH oxidoreductase, RnfABCDGE type, D subunit n... 314 3e-84 UniRef50_D0L1N4 Electron transport complex, RnfABCDGE type, D su... 313 5e-84 UniRef50_B0K145 Electron transport complex, RnfABCDGE type, D su... 311 2e-83 UniRef50_C7RDT6 Electron transport complex, RnfABCDGE type, D su... 306 1e-81 UniRef50_A6LW78 Electron transport complex, RnfABCDGE type, D su... 306 1e-81 UniRef50_B9ZJX0 Electron transport complex, RnfABCDGE type, D su... 304 4e-81 UniRef50_D1N842 Electron transport complex, RnfABCDGE type, D su... 303 6e-81 UniRef50_Q5LC49 Electron transport complex protein RnfD n=42 Tax... 302 2e-80 UniRef50_B3PB33 Electron transport complex protein rnfD n=91 Tax... 300 6e-80 UniRef50_B8CY14 Electron transport complex, RnfABCDGE type, D su... 298 2e-79 UniRef50_B0VFN9 Electron transport complex protein rnfD n=1 Tax=... 295 1e-78 UniRef50_B5JR41 Electron transport complex, RnfABCDGE type, D su... 295 1e-78 UniRef50_C0WAW4 Putative uncharacterized protein n=1 Tax=Acidami... 295 2e-78 UniRef50_C1SKX3 Electron transport complex, RnfABCDGE type, D su... 294 2e-78 UniRef50_B3EJT7 Electron transport complex, RnfABCDGE type, D su... 293 5e-78 UniRef50_UPI0001BC5C0E Na(+)-translocating NADH-quinone reductas... 293 5e-78 UniRef50_B8D8R7 Electron transport complex protein rnfD n=4 Tax=... 293 8e-78 UniRef50_Q0TQI7 Electron transport complex, RnfABCDGE type, D su... 292 2e-77 UniRef50_Q89AW7 Electron transport complex protein rnfD n=1 Tax=... 292 2e-77 UniRef50_C4L9H7 Electron transport complex, RnfABCDGE type, D su... 289 7e-77 UniRef50_A9BJD1 Electron transport complex, RnfABCDGE type, D su... 289 1e-76 UniRef50_A9KRW8 Electron transport complex, RnfABCDGE type, D su... 287 3e-76 UniRef50_Q9EVN4 Electron transport complex protein rnfD n=20 Tax... 286 7e-76 UniRef50_D2RN95 Electron transport complex, RnfABCDGE type, D su... 286 8e-76 UniRef50_Q1Q5X4 Conserved hypothetical electron transport protei... 286 8e-76 UniRef50_Q5P536 Electron transport complex protein rnfD (Nitroge... 286 1e-75 UniRef50_Q2LXU1 Sodium-translocating NADH-quinone reductase subu... 286 1e-75 UniRef50_B0PD31 Putative uncharacterized protein n=3 Tax=Clostri... 285 2e-75 UniRef50_Q3B3R3 Electron transport complex, RnfABCDGE type, D su... 285 2e-75 UniRef50_C9XNL3 Electron transport complex protein n=9 Tax=Bacte... 283 7e-75 UniRef50_A6TQH0 Electron transport complex, RnfABCDGE type, D su... 282 8e-75 UniRef50_A1WT47 Electron transport complex, RnfABCDGE type, D su... 279 9e-74 UniRef50_Q73PG2 Na(+)-translocating NADH-quinone reductase, B su... 278 2e-73 UniRef50_B5YE56 RnfD/nqrB n=3 Tax=Bacteria RepID=B5YE56_DICT6 278 2e-73 UniRef50_A1WTR8 Electron transport complex protein rnfD n=2 Tax=... 277 3e-73 UniRef50_C3WYL8 Na(+)-translocating NADH-quinone reductase subun... 276 6e-73 UniRef50_A8ZSV3 Electron transport complex, RnfABCDGE type, D su... 276 9e-73 UniRef50_C1QFU9 Electron transport complex, RnfABCDGE type, D su... 275 2e-72 UniRef50_A5TRQ5 NADH dehydrogenase (Ubiquinone), RnfD subunit n=... 273 5e-72 UniRef50_D1VUL1 Electron transport complex protein RnfD n=1 Tax=... 272 1e-71 UniRef50_B2A143 Electron transport complex, RnfABCDGE type, D su... 272 2e-71 UniRef50_A6NPN1 Putative uncharacterized protein n=1 Tax=Bactero... 270 5e-71 UniRef50_C7GZP4 Na(+)-translocating NADH-quinone reductase, B su... 269 7e-71 UniRef50_Q3SHB5 Electron transport complex, RnfABCDGE type, D su... 269 9e-71 UniRef50_A7C2T7 Electron transport complex, NQR2 and RnfD n=2 Ta... 268 2e-70 UniRef50_UPI0001C35E54 electron transport complex, RnfABCDGE typ... 267 4e-70 UniRef50_C7H9I4 Na-translocating NADH-quinone reductase, Nqr2 su... 266 1e-69 UniRef50_C1D7J0 Electron transport complex, NQR2 and RnfD n=3 Ta... 264 4e-69 UniRef50_C8WMP8 Electron transport complex, RnfABCDGE type, D su... 263 6e-69 UniRef50_B6BWH4 Na-translocating NADH-quinone reductase, Nqr2 su... 262 1e-68 UniRef50_C6L9Q2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 261 2e-68 UniRef50_A5CXQ4 Electron transport complex protein RnfD n=2 Tax=... 259 9e-68 UniRef50_B9Y6Y9 Putative uncharacterized protein n=1 Tax=Holdema... 257 4e-67 UniRef50_D1U4Y0 Electron transport complex, RnfABCDGE type, D su... 256 1e-66 UniRef50_C4Z023 Electron transport complex protein RnfD n=38 Tax... 253 7e-66 UniRef50_C9A8K0 RnfD protein n=3 Tax=Enterococcus casseliflavus ... 252 1e-65 UniRef50_B2A1V3 Electron transport complex, RnfABCDGE type, D su... 251 3e-65 UniRef50_Q52715 Electron transport complex protein rnfD n=1 Tax=... 249 9e-65 UniRef50_Q0AAH0 Electron transport complex, RnfABCDGE type, D su... 247 6e-64 UniRef50_C9LBM8 Na(+)-translocating NADH-quinone reductase, B su... 246 9e-64 UniRef50_A6L5A0 Na+-translocating NADH-quinone reductase subunit... 245 2e-63 UniRef50_C4FA61 Putative uncharacterized protein n=2 Tax=Collins... 244 5e-63 UniRef50_C2MAM1 NADH:ubiquinone oxidoreductase, na(+)-translocat... 244 5e-63 UniRef50_Q4K755 Electron transport complex, RnfABCDGE type, D su... 242 2e-62 UniRef50_Q315L3 Electron transport complex, RnfABCDGE type, D su... 242 2e-62 UniRef50_A1ZH15 NADH:ubiquinone oxidoreductase, na(+)-translocat... 242 2e-62 UniRef50_B0S2D0 Sodium-translocating NADH-quinone reductase subu... 240 5e-62 UniRef50_A8ZWA7 NADH:ubiquinone oxidoreductase, subunit B n=4 Ta... 240 6e-62 UniRef50_C6BWF3 NADH:ubiquinone oxidoreductase, subunit B n=2 Ta... 239 9e-62 UniRef50_C6BZS9 Electron transport complex, RnfABCDGE type, D su... 239 1e-61 UniRef50_A4BWI5 Na(+)-translocating NADH-quinone reductase subun... 234 3e-60 UniRef50_C6BTM1 Electron transport complex, RnfABCDGE type, D su... 233 8e-60 UniRef50_C0BFX7 NADH:ubiquinone oxidoreductase, subunit B n=1 Ta... 233 9e-60 UniRef50_B6WV80 Putative uncharacterized protein n=1 Tax=Desulfo... 230 7e-59 UniRef50_A6DRQ1 Na(+)-translocating NADH-quinone reductase subun... 229 2e-58 UniRef50_Q1K3T0 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 228 2e-58 UniRef50_A6TT06 NQR2 and RnfD family protein n=2 Tax=Bacteria Re... 228 2e-58 UniRef50_B0MXK4 Putative uncharacterized protein n=1 Tax=Alistip... 228 2e-58 UniRef50_Q7MIC8 Na(+)-translocating NADH-quinone reductase subun... 225 2e-57 UniRef50_Q1QX85 Na(+)-translocating NADH-quinone reductase subun... 225 3e-57 UniRef50_Q1Q257 Similar to Na(+)-translocating NADH-quinone redu... 222 2e-56 UniRef50_B8J065 NQR2 and RnfD family protein n=1 Tax=Desulfovibr... 222 2e-56 UniRef50_A4CPG2 Na(+)-translocating NADH-quinone reductase subun... 219 9e-56 UniRef50_D2MNQ0 NQR2 and RnfD family protein (Fragment) n=1 Tax=... 217 5e-55 UniRef50_C8WYR0 Electron transport complex, RnfABCDGE type, D su... 217 6e-55 UniRef50_A5EVI1 Electron transport complex protein, D subunit n=... 216 9e-55 UniRef50_D1AFF8 NQR2 and RnfD family protein n=1 Tax=Sebaldella ... 215 1e-54 UniRef50_B8FN65 NQR2 and RnfD family protein n=3 Tax=Desulfobact... 214 4e-54 UniRef50_A6WSA0 NADH:ubiquinone oxidoreductase, subunit B n=20 T... 213 7e-54 UniRef50_C9N0N0 Electron transport complex, RnfABCDGE type, D su... 213 1e-53 UniRef50_A8RDS0 Putative uncharacterized protein n=2 Tax=unclass... 212 2e-53 UniRef50_A4SQL9 Na(+)-translocating NADH-quinone reductase subun... 211 2e-53 UniRef50_B0P6D0 Putative uncharacterized protein n=1 Tax=Anaerot... 211 4e-53 UniRef50_C1I7V3 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_A7HKQ1 NQR2 and RnfD family protein n=5 Tax=Thermotogac... 197 7e-49 UniRef50_A1WUZ1 Electron transport complex, RnfABCDGE type, D su... 196 1e-48 UniRef50_B0MP93 Putative uncharacterized protein n=1 Tax=Eubacte... 195 2e-48 UniRef50_C7NCF4 NQR2 and RnfD family protein n=2 Tax=Leptotrichi... 193 7e-48 UniRef50_C0EE37 Putative uncharacterized protein n=1 Tax=Clostri... 193 8e-48 UniRef50_Q12W78 Electron transport complex protein rnfD n=2 Tax=... 188 2e-46 UniRef50_A4MZD3 Electron transport complex protein RnfD n=1 Tax=... 188 3e-46 UniRef50_C3X8F5 Electron transport complex n=1 Tax=Oxalobacter f... 184 3e-45 UniRef50_A9NEB1 NADH oxidoreductase complex RnfABCDGE type, D su... 184 5e-45 UniRef50_A8S6D0 Putative uncharacterized protein n=2 Tax=Faecali... 174 3e-42 UniRef50_A9NGU6 Na+-transporting NADH:ubiquinone oxidoreductase ... 172 3e-41 UniRef50_C7NE07 NADH:ubiquinone oxidoreductase subunit RnfD-like... 163 8e-39 UniRef50_UPI0001698867 electron transport complex, RnfABCDGE typ... 142 2e-32 UniRef50_D1RAM2 Putative uncharacterized protein n=1 Tax=Parachl... 138 3e-31 UniRef50_Q73MW5 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema ... 137 7e-31 UniRef50_D1PJN0 Putative uncharacterized protein n=1 Tax=Subdoli... 131 3e-29 UniRef50_UPI00017427D7 electron transport complex protein RnfC n... 128 4e-28 UniRef50_C8PP64 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema ... 127 5e-28 UniRef50_UPI0001C372ED NADH:ubiquinone oxidoreductase, RnfD subu... 122 2e-26 UniRef50_Q3KM84 Na(+)-translocating NADH-quinone reductase subun... 120 1e-25 UniRef50_UPI0001698C61 Electron transport complex, RnfABCDGE typ... 77 1e-12 UniRef50_UPI00016996B3 hypothetical protein Epers_17019 n=1 Tax=... 76 2e-12 UniRef50_A9D761 Na(+)-translocating NADH-quinone reductase subun... 70 1e-10 UniRef50_C0B3W9 Putative uncharacterized protein n=1 Tax=Proteus... 55 6e-06 Sequences not found previously or not previously below threshold: UniRef50_B5RQQ1 Uncharacterized conserved protein n=24 Tax=Borre... 70 1e-10 UniRef50_Q8YVI1 Alr1997 protein n=17 Tax=Cyanobacteria RepID=Q8Y... 64 7e-09 UniRef50_B2S298 Hypothetical integral membrane protein n=2 Tax=T... 64 1e-08 UniRef50_A9DQU2 Na(+)-translocating NADH-quinone reductase subun... 60 9e-08 UniRef50_A7BVL8 Putative uncharacterized protein n=1 Tax=Beggiat... 59 2e-07 UniRef50_UPI0001699E71 hypothetical protein Epers_14217 n=1 Tax=... 51 6e-05 UniRef50_C4GIQ6 Putative uncharacterized protein n=1 Tax=Kingell... 47 8e-04 UniRef50_A4AIL5 Putative uncharacterized protein n=1 Tax=marine ... 45 0.004 UniRef50_Q988S3 Mll6619 protein n=1 Tax=Mesorhizobium loti RepID... 45 0.005 UniRef50_A5EU44 Putative uncharacterized protein n=2 Tax=Bradyrh... 45 0.006 UniRef50_Q1CWI3 FG-GAP repeat protein n=2 Tax=Myxococcales RepID... 44 0.008 UniRef50_D0L5Q6 Oxidoreductase FAD/NAD(P)-binding domain protein... 43 0.016 UniRef50_Q84HM4 UnbU n=2 Tax=Actinomycetales RepID=Q84HM4_NOCAE 43 0.017 UniRef50_A6VEU6 Membrane protein, putative n=62 Tax=Bacteria Rep... 41 0.077 >UniRef50_Q15RL2 Electron transport complex protein rnfD n=81 Tax=Proteobacteria RepID=RNFD_PSEA6 Length = 357 Score = 347 bits (890), Expect = 4e-94, Method: Composition-based stats. Identities = 183/351 (52%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +++ASSP+ H +R T ++M +V+ A +PGI Q WFFG+G LVQI LA ++A++ EA Sbjct: 1 MNYKLASSPHQHVRRNTGQVMRMVIYALIPGILLQTWFFGFGVLVQIALAVITAVVTEAT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L++RK++ +KD SA+LT +LLA+SIPP APWW++V+GT FA+ + KQLYGGLG N Sbjct: 61 ILEMRKRNFERAIKDYSAILTAILLAISIPPFAPWWVIVIGTFFAIAMVKQLYGGLGFNV 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM YV+LL+SFPVQMT WLP + + PG IDAI +F+G +A G + L+ Sbjct: 121 FNPAMAAYVMLLVSFPVQMTQWLPAQSLTAHQPGLIDAIYAVFTGFSADGFSLAQLQGAA 180 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DG + ATPLD KT + G + E+ +Q I+ G L G GW WV+ +L GG++L+ K I Sbjct: 181 DGHTMATPLDAIKTGLAQGLTYEEGLQSAIFDGSL-GIGWWWVSTGYLLGGLYLIRAKII 239 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 WHIP L ALCA + +L + A+P H+ +G+ +LGAFFI TDPV+ASTTN+GR Sbjct: 240 NWHIPGGMLAGAALCAGVMFLVDADRFASPLFHIFNGSLILGAFFIATDPVSASTTNKGR 299 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +IFGA G V++IR++GGYPD +AF+VL+ N+ VPLIDYYTRPR YGH K Sbjct: 300 IIFGAAIGFWVYVIRTWGGYPDAIAFSVLIMNMAVPLIDYYTRPRTYGHTK 350 >UniRef50_Q482U6 Electron transport complex protein rnfD n=103 Tax=Gammaproteobacteria RepID=RNFD_COLP3 Length = 353 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 192/352 (54%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F IASSP+ HN +T +M LV+ A +PG+ AQ +FFGWG L+ I LA +A++ E Sbjct: 1 MAFWIASSPHNHNHTKTPNLMRLVIYATLPGVLAQWYFFGWGNLIHIGLAMTTAIICEFT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 VL LRK+ ++ L D SALLT LLL + +P LAPWW+ V+GT+FA++I KQLYGGLG NP Sbjct: 61 VLSLRKKPISHELFDGSALLTALLLGICLPALAPWWITVIGTMFAIVIVKQLYGGLGHNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM GYV+LL+SFP+QMT W PP + F + + I +G T G + +R I Sbjct: 121 FNPAMAGYVMLLVSFPLQMTLWQPPLTLVAVDLNFTNTLTTILTGFTVEGYSVEQVRTSI 180 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DGI+ ATPLDT KT+ G +V + ++ PI+ LA GW+WVN +L GG++L+ +KAI Sbjct: 181 DGITMATPLDTLKTNTGLGLTVLESIKNPIFGENLA-LGWEWVNAGFLLGGLFLISRKAI 239 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W P+SFL++L +C+ +G+ SP++ A+ H SGATMLGAFFILTDPVT +T+N+GR Sbjct: 240 AWQTPISFLLSLFICSFIGYSISPDSSASTMFHWFSGATMLGAFFILTDPVTGATSNKGR 299 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +I G LAGLLV+LIR+ GGYPDGVAFA+LL N++ PLID YTRPR YGH KG Sbjct: 300 IIVGLLAGLLVYLIRTSGGYPDGVAFAILLCNMSAPLIDQYTRPRTYGHLKG 351 >UniRef50_Q4QJQ5 Electron transport complex protein rnfD n=74 Tax=Gammaproteobacteria RepID=RNFD_HAEI8 Length = 358 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 247/353 (69%), Gaps = 6/353 (1%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 +F++ SSP+TH+ + T+ IML V+LA +P Q+++FG+G ++Q LA +A++AE + Sbjct: 1 MFKMVSSPHTHSGKLTAHIMLWVILAMMPAFFTQIYYFGFGVVLQSALAIGTAIIAEFIA 60 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 +KLR + L D S LT L+LA++IPP AP+W++++GT+ AV++ KQ+YGGLGQNPF Sbjct: 61 IKLRGKKPLNYLSDFSVALTALILAMAIPPYAPYWIIIIGTLCAVLLGKQVYGGLGQNPF 120 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPAMIGYV+LLISFP+QMT+W+PP + P F D +IFSG T G ++ L ID Sbjct: 121 NPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDTFSLIFSGLTTDGFTLSQLTHNID 180 Query: 182 GISQATPLDTFKTSVRAGHSVE---QIMQYPIYSGILA--GAGWQWVNLAWLAGGVWLLW 236 GI+QATPLD+ K ++ + + ++++ PI+ G GW +N+A+LAGG++L+ Sbjct: 181 GITQATPLDSAKIFYKSHNQLSDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLIL 240 Query: 237 QKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTT 296 ++ I W IP++ LVT C F+ T + L+SGA M GAFFI TDPVTAS T Sbjct: 241 KRIIHWQIPVAMLVTFF-CLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASIT 299 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 RG++IFGAL GL V+LIR G YPDGVAFA+LL+NI VPLID+YTRPRV G+ Sbjct: 300 PRGKIIFGALVGLFVYLIRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGY 352 >UniRef50_A0L5G5 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Proteobacteria RepID=A0L5G5_MAGSM Length = 355 Score = 318 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 143/359 (39%), Positives = 213/359 (59%), Gaps = 18/359 (5%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SSP+ H ++ML V+ A P ++ FGW L+ I+L +S ++ E L Sbjct: 1 MTLMTSSSPHVHGGDSVDKVMLNVIKALAPATLLSIFLFGWPALLVIVLTVLSCVVMERL 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 LR + +T+ D SA+LTGLLLA+++PP +PWW+ V+G VFA+ + K +YGGLG N Sbjct: 61 TNMLRGRP--STIGDYSAILTGLLLALTLPPHSPWWICVVGGVFAIGVGKSVYGGLGYNM 118 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEI-AVNIPGFIDAIQVIFSGHTASGGDMNTLRLG 179 FNPA+I V LLISFPVQ+T+W + A + + +IF+G S Sbjct: 119 FNPALIARVFLLISFPVQLTTWPQISPLFAADSFSLAQSFSIIFAGDYGSVV-------- 170 Query: 180 IDGISQATPLDTFKTSVRAGHSVEQIMQYPI-------YSGILAGAGWQWVNLAWLAGGV 232 +D I+ ATPL ++ G SV + + +G + G+ + LA +AGG+ Sbjct: 171 MDSITAATPLGHYRIETGLGKSVAEALGGDFGFSFSHSIAGDIGGSLGETSALALVAGGI 230 Query: 233 WLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVT 292 W++ + I WHIP+S ++ + A + WL + + P HL++G +LGAFF+ TD VT Sbjct: 231 WMIRKGLITWHIPVSMILGTVIPATVMWLINGDVYPDPLFHLVTGGLLLGAFFMATDMVT 290 Query: 293 ASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + T RG LIFG L G+L ++IR++GGYP+GV+FAV++ N VPLID YT+P VYG K Sbjct: 291 SPVTPRGMLIFGGLCGVLTYVIRTWGGYPEGVSFAVVIMNTAVPLIDQYTKPVVYGKSK 349 >UniRef50_Q3A7W9 NADH:ubiquinone oxidoreductase, RnfD subunit-like n=4 Tax=Bacteria RepID=Q3A7W9_PELCD Length = 334 Score = 317 bits (812), Expect = 4e-85, Method: Composition-based stats. Identities = 131/350 (37%), Positives = 188/350 (53%), Gaps = 33/350 (9%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ SP+ H T +M V+LA +P ++ FG + + + SA+ EAL Sbjct: 7 LLSVSCSPHLHCGMTTRGMMGAVILALLPAAVVAVYLFGLAAVAVMTICVASAVAVEALW 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K V T+ D SA+LTGLL+A ++PP +PWW+ +LG+V A++I KQ++GGLG NPF Sbjct: 67 QKAVGSPV--TVSDGSAVLTGLLVAFNLPPSSPWWLALLGSVIAIVIGKQVFGGLGHNPF 124 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++ +VLL+SFP MT W P R D Sbjct: 125 NPALVARIVLLVSFPTVMTHWSGPQPG----------------------------RFLAD 156 Query: 182 GISQATPLDTFKTSVRAGHSVE---QIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 ++ ATPL K++V + G +AG + LA L G ++LLW++ Sbjct: 157 AVTAATPLSETKSAVMLSGHLPPNATGFALDYLLGNMAGCLGEVSALALLIGALFLLWRR 216 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I WHIP+S++ T+A + + WL P P HLLSG MLGAF++ TD VT+ T R Sbjct: 217 VISWHIPVSYIGTVATVSGMFWLVDPSRYPHPVFHLLSGGLMLGAFYMATDLVTSPLTGR 276 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 L++G GL LIR FG YP+GVAF++LL N PL+D Y PR +G Sbjct: 277 SMLLYGCGCGLFTVLIRLFGSYPEGVAFSILLMNTVTPLLDRYLVPRPFG 326 >UniRef50_Q31GU5 NADH oxidoreductase, RnfABCDGE type, D subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GU5_THICR Length = 343 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 156/351 (44%), Positives = 222/351 (63%), Gaps = 8/351 (2%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SP+THN ++ML V +AA P + ++FFG+G +Q LA ++ ++ E Sbjct: 1 MATIPHTSPFTHNASSVRKVMLQVQIAAFPALMTHIYFFGFGITIQWTLAVLTLIIVETT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +LKLR + VA L D S L+T + IPP APWW++V G FA+I K LYGGLG NP Sbjct: 61 LLKLRDRPVAPYLFDLSGLITVTGIVFCIPPEAPWWVIVSGVTFALIFGKHLYGGLGYNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GY LLISFP ++T W P E++ + FI++ +IF+G +L L Sbjct: 121 FNPAMLGYAFLLISFPAELTQWTLPSEVSGHHISFIESFHLIFTG--------QSLNLSF 172 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D ++ ATPLD KT++ G V + ++G GW W+N+A+ GG+W+L+++AI Sbjct: 173 DQLTGATPLDEVKTALSMGVPVTTTLNSSNFNGEQIPYGWAWINMAFFLGGLWMLYKRAI 232 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RW P+ FL TLA A L P T A HLL+G ML AFFI+TDPVT+STT GR Sbjct: 233 RWQYPVGFLGTLAAIAYLFNWIDPNTYAPASFHLLTGGIMLAAFFIITDPVTSSTTPLGR 292 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 ++ A +LV++IR++G +PDG+AF +L+ N+ VPLID YT+PRV G+R+ Sbjct: 293 FVYAAGIAVLVYVIRNWGAFPDGIAFGILIMNMFVPLIDQYTQPRVVGYRR 343 >UniRef50_D0L1N4 Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Gammaproteobacteria RepID=D0L1N4_HALNC Length = 349 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 169/351 (48%), Positives = 227/351 (64%), Gaps = 7/351 (1%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F ++P R+ML VLLA +PG A + GWG L+ ILLA ++ L+AEA Sbjct: 1 MKFSPQTAPLPEVSNSVRRVMLTVLLAMLPGTAVAIALLGWGVLINILLAVIAGLVAEAA 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L LR + V + D S ++ +LA+ +P L PWW+ V GTVFAV++AKQLYGGLG N Sbjct: 61 MLTLRARPVRPAIGDGSVIVLAWILALCLPNLGPWWLPVFGTVFAVVVAKQLYGGLGFNL 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GYVVLLISFP MT W P + + + F+ ++ FSG +G G Sbjct: 121 FNPAMVGYVVLLISFPEPMTRWGPAIDSSGSALNFMQSLAWSFSGVLPNGV-------GY 173 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DG+S ATPLD + + G ++ + Q LA + W++LA+LAGG +LLW+ I Sbjct: 174 DGLSVATPLDHAREQLSTGATIHNVTQSLFSGTSLAQSWNLWLSLAFLAGGAFLLWRGVI 233 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RWHIP++ + + + + WL A+P HL++GAT+ GAFF+ TDPVTASTT RGR Sbjct: 234 RWHIPVAMITGVLVMSGFLWLLDSARHASPLFHLITGATVFGAFFVATDPVTASTTPRGR 293 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 LIFG G+L LIRSFG YPDGVAFAVLL N+ VPLIDYY++P+V+GH+K Sbjct: 294 LIFGFGIGVLTVLIRSFGSYPDGVAFAVLLMNLCVPLIDYYSQPKVFGHKK 344 >UniRef50_B0K145 Electron transport complex, RnfABCDGE type, D subunit n=36 Tax=Clostridia RepID=B0K145_THEPX Length = 335 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 191/350 (54%), Gaps = 27/350 (7%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + RIML V++A P I ++ FG L IL++ S++L EAL+ Sbjct: 13 KLLVSSSPHIRSNESVQRIMLDVVIALTPAIIGSVYLFGLNALKLILISVASSVLFEALI 72 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KL K+ + T+ D SA +TG+L+A ++P APWW+ V+G+ FA+I+ KQL+GGLG N Sbjct: 73 QKLFKKPI--TITDFSAAITGILIAFNLPASAPWWLPVIGSAFAIIVVKQLFGGLGANFM 130 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ +L+ S+PV MT++ V S ++ + D Sbjct: 131 NPALAARAMLMTSWPVHMTNYTGTRPDVVT-----------------SATPLSIMGTRPD 173 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++ ATPL K G E ++ G + G + L L G V+L+ +K I Sbjct: 174 VVTSATPLSIMKY----GTGAELPTLRDMFIGNIPGVIGETSALLLLIGAVYLIIRKVID 229 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP+ ++ T + +L + P+ L H+L G +LGAF++ TD ++ T GR+ Sbjct: 230 WKIPVFYIGTTFIMLLLLGV-EPKLLP---YHILGGGLILGAFYMATDYSSSPVTPLGRI 285 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IF AG+L +IR G YP+GV++++LL N+ PLI+ +T+P V+G K Sbjct: 286 IFAVGAGILTAIIRVKGAYPEGVSYSILLMNVATPLIEKFTKPNVFGKVK 335 >UniRef50_C7RDT6 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RDT6_ANAPD Length = 325 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 111/348 (31%), Positives = 189/348 (54%), Gaps = 38/348 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + +SP+ + R + ML V++A +P A +++FG+ L+ IL + ++ +L+E + Sbjct: 7 LLVTASPHVRSNRTVKKDMLDVIIALIPAGLASVYYFGYRALILILASVITCVLSEYIFN 66 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K K++ ++KD SA++TG+LLA ++P P W +V+G +FA+I+AK +GG+GQN N Sbjct: 67 KATKRN--QSIKDLSAVVTGILLAYNVPFTLPVWQMVIGAMFAIIVAKMFFGGIGQNIVN 124 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ L+ S+ MTS++PP +A + Sbjct: 125 PALAARAFLMASWSETMTSFVPPQRVATLK-----------------------TVKDVSM 161 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +S ATPL ++ G + G + LA L G +L+ +K I Sbjct: 162 VSGATPLS----------DPASFSTMDLFLGNIPGCLGEVSALAILIGACYLIVRKVIHV 211 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IPL++++T + L +F P+ AA ++LSG +LGAFF+ TD T T +G+ + Sbjct: 212 RIPLTYILTATV---LLGIFGPDGFAASLRNVLSGGLLLGAFFMATDYTTTPMTIKGQYV 268 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 F AG+L +IR +GGYP+GV++++LL N+ VP+I+ +TRP+ +G Sbjct: 269 FAIGAGILTAIIRVWGGYPEGVSYSILLMNLVVPIIEAHTRPKTFGKV 316 >UniRef50_A6LW78 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW78_CLOB8 Length = 345 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 115/354 (32%), Positives = 187/354 (52%), Gaps = 42/354 (11%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 F +++SP+ S+IM V +A P +++FG L+ +++ + SA+ E LV Sbjct: 27 FTVSASPHIRCDESISKIMWNVNIALAPAAIFSIYYFGIPALINLVVGAASAVAFEYLVQ 86 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K RK+ + T D SA LTGLLLA+ + P P +M++ G+ A++IAK GGLG N FN Sbjct: 87 KFRKKKI--TAFDGSAFLTGLLLAMCVSPTLPVYMIIAGSFVAIVIAKHSMGGLGYNIFN 144 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA IG L++S+PV MT+W + +D Sbjct: 145 PAHIGRAALMVSWPVAMTTW-------------------------------TKMTTSVDV 173 Query: 183 ISQATPLDTFK----TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 +S ATPL+ K + + + ++ G G+ + + + GG +L+++ Sbjct: 174 VSSATPLNILKQQGYSKLIETFGGNTELYKAMFIGTRNGSAGETSTILLIIGGAYLIYKG 233 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETL--AAPQIHLLSGATMLGAFFILTDPVTASTT 296 I+W +P+ + T+ + + W+F P L P H+++G ++GAFF+ TD VTA T Sbjct: 234 YIKWQVPVCMIGTVGI---ITWIFGPSGLFSGDPIFHMMAGGLIIGAFFMATDMVTAPIT 290 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +G++IF AGL+ LIR GGYP+GV +++LL N PLID + +P+ +G R Sbjct: 291 LKGQIIFAVGAGLITSLIRLIGGYPEGVCYSLLLMNAVTPLIDRFVKPKQFGAR 344 >UniRef50_B9ZJX0 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Gammaproteobacteria RepID=B9ZJX0_9GAMM Length = 353 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 232/352 (65%), Gaps = 8/352 (2%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M FR SSP+ +M VL+A VPG A WFFGWG LV +LL + A+ EA Sbjct: 1 MRFRTQSSPHVIPAHSVGGVMQQVLMALVPGTLAMTWFFGWGVLVNVLLGVLFAVAFEAA 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 ++ RK+ V ATL DNSA++TG L A++IPPLAP+W+ ++G FA+I+AK LYGGLG NP Sbjct: 61 MVAARKRPVMATLADNSAIVTGWLFALAIPPLAPFWVTLIGIAFAIIVAKHLYGGLGYNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GYVV+L+SFP +M W P + + + +Q + +G Sbjct: 121 FNPAMVGYVVVLVSFPREMALWPAPSTLPESPLTLLQTLQTVLTGSLPGA-------QAW 173 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D +++ATPLD + + +G +V +I P++ G GW+WV +L GG++LL+++ I Sbjct: 174 DAVTRATPLDAMREGLVSGRTVGEITASPLF-GSFTETGWEWVGNFFLLGGLYLLFRRII 232 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 WHIP++ ++ +A+ A WL P++ A+P H+ SGA ++GAFFI TDPV+ASTT GR Sbjct: 233 HWHIPVAVILGVAIPAGFFWLLDPDSFASPAFHVFSGAVIIGAFFIATDPVSASTTPLGR 292 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +++GA G+L+++IR++GGYPD VAFAVLL N+ P +D+ TRPR++G +G Sbjct: 293 ILYGAGIGVLIFVIRTWGGYPDAVAFAVLLMNMVAPTLDHLTRPRIFGRTRG 344 >UniRef50_D1N842 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N842_9BACT Length = 365 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 183/346 (52%), Gaps = 26/346 (7%) Query: 17 TSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDN 76 RIM VLLA VP A +WFFG+ LV +++ + + AEAL KL + V T+ D Sbjct: 32 VRRIMYKVLLALVPAAIAGVWFFGFYALVVMVVTMLFCVGAEALWCKLAGKPVMGTIADG 91 Query: 77 SALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFP 136 SA +TGLLLA+++PP P W+ ++G A+ + KQ++GG+G NPFNPA++ V LLI+ P Sbjct: 92 SAAVTGLLLAMNLPPGVPLWVCLIGAFLAIWLGKQIFGGIGNNPFNPALVARVGLLIALP 151 Query: 137 VQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSV 196 MT+W P F + + +D I+ ATPL T+ Sbjct: 152 AIMTTWPVPRS---------------FDSADPAAKITHATDTPVDSITGATPLGEVGTTK 196 Query: 197 RAGHSVE-----------QIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIP 245 + E M + + G G + LA L GG+ L+ K I W +P Sbjct: 197 KILDKSEAAYANFQAVDNDAMLWKYFLGEKGGCIGETSVLALLIGGILLIALKLINWRVP 256 Query: 246 LSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGA 305 + ++ T+A+ L F P +P H+L+G M+GAFF+ TD VT+ T+ G ++F Sbjct: 257 VCYIGTVAIITGLVHFFYPGVSPSPLFHILTGGLMIGAFFMATDMVTSPITSTGCVVFAV 316 Query: 306 LAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G++ +IR +G YP+GV+F++L N VPLID + R +G+ + Sbjct: 317 GCGVITSVIRLWGNYPEGVSFSILFMNALVPLIDRWCSQRPFGYVR 362 >UniRef50_Q5LC49 Electron transport complex protein RnfD n=42 Tax=Bacteria RepID=Q5LC49_BACFN Length = 330 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 182/349 (52%), Gaps = 26/349 (7%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++ SP+ H + M VL+A +P L +FG G L+ + ++ L E + Sbjct: 4 KLIVSLSPHVHGGDSVQKNMYGVLIALIPAFIVSLVYFGLGALIVTATSVIACLFFEWAI 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K + T+ D SA++TG+LLA ++P P W+++LG +FA+ + K +GGLG NPF Sbjct: 64 GKFLLKKETTTICDGSAVITGVLLAFNLPSNLPVWIIILGALFAIGVGKMSFGGLGNNPF 123 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ G V LL+SFPVQMTSW ++ A + G D++ D Sbjct: 124 NPALAGRVFLLLSFPVQMTSWPVVGQLTAYTDATTAATPLALMKQAIHG-DVSAFGQLPD 182 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + ++ G G + A + G +++LW++ I Sbjct: 183 A-------------------------WSLFIGNNGGCLGEVSAAALILGLLYMLWKRIIT 217 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 WHIP+S LVT+ + + + L +PE +P I LLSG MLGA F+ TD VT+ + +G L Sbjct: 218 WHIPVSILVTVFVFSGIMHLANPEAYVSPVIQLLSGGLMLGAIFMATDYVTSPMSKKGML 277 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 I+G GLL +IR FG YP+G++FA+L+ N PLI+ Y +P+ +G Sbjct: 278 IYGVCIGLLTVVIRLFGAYPEGMSFAILIMNAFTPLINTYCKPKRFGEV 326 >UniRef50_B3PB33 Electron transport complex protein rnfD n=91 Tax=Gammaproteobacteria RepID=RNFD_CELJU Length = 356 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 173/355 (48%), Positives = 236/355 (66%), Gaps = 16/355 (4%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SP+ +TSR+MLLV+ A +PG+ WFFG G LV +LLAS+S +L EAL Sbjct: 1 MALLNITSPHAQGANRTSRLMLLVVYATIPGMFTMTWFFGPGVLVNVLLASISCMLFEAL 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +K R++ V L+D SAL+TG+L+ VS+PP PWW+++ G+ A+I+AKQLYGG+G NP Sbjct: 61 AIKARQRPVGFYLRDFSALVTGVLIGVSLPPYCPWWLLISGSFIAIILAKQLYGGMGFNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAV--NIPGFIDAIQVIFSGHTASGGDMNTLRL 178 FNPAM+ Y +LL+SFPV+MT W P + V +PG +D + +FSG Sbjct: 121 FNPAMVAYALLLVSFPVEMTQWAQPKPLWVDGQLPGLMDTLAKVFSGAP----------- 169 Query: 179 GIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 IDG S AT LD K + Q + G A AGW+WVN+A+L GG++LL++K Sbjct: 170 -IDGYSGATALDIIKQNKGLVLGDLYQQQPLLAEGRWASAGWEWVNIAFLFGGLYLLYKK 228 Query: 239 AIRWHIPLSFLVTLALCAMLGW-LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTN 297 WH P+S L+ LAL A L + S + +P HLL+GATMLGAFFI+TDPV+++ + Sbjct: 229 VYTWHAPVSMLLALALMAALFYDSGSSSSSGSPLFHLLTGATMLGAFFIVTDPVSSTVST 288 Query: 298 RGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +GR+I+GAL G+LV++IR++G YPDGVAFAVLL N P IDYYT PR YGH+K Sbjct: 289 KGRVIYGALIGMLVYVIRTWGSSYPDGVAFAVLLMNFAAPFIDYYTTPRTYGHKK 343 >UniRef50_B8CY14 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8CY14_HALOH Length = 307 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 187/349 (53%), Gaps = 51/349 (14%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + SSP+ + ++IM V+ + VP I A +WFF L+ I + V ALL E + Sbjct: 6 LVVTSSPHIRDVTTVNQIMWSVVFSLVPAIVAAVWFFKINALLVISVTVVFALLTEVIFQ 65 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 R + V T+ D SA++TG+LLA+++PP P W+ LG+V AV + KQ++GGLG NPFN Sbjct: 66 IARGKEV--TINDGSAVITGILLALTLPPTIPLWIAALGSVVAVGLGKQVFGGLGYNPFN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA++G L+ ++PV MT+W+ +DG Sbjct: 124 PALVGRAFLIAAYPVPMTTWI------------------------------------LDG 147 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + ATPL+ K+ + ++ G + G + LA L G V+L+++ I W Sbjct: 148 QTTATPLNLMKSDGILTD------YWDLFIGHIGGCLGETSALALLLGAVYLIYKGYIDW 201 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP L ++ + ML + P HL +G +LGAF++ TD VT T GR I Sbjct: 202 RIPAGMLGSVFVLTML-------SGQDPVFHLFAGGLVLGAFYMATDMVTTPVTKMGRWI 254 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 FG AGL+V +IR +GGYP+GV F++LL N+TVP+++ YTRPR G K Sbjct: 255 FGVGAGLIVVVIRLWGGYPEGVLFSILLMNMTVPILNRYTRPRSLGEVK 303 >UniRef50_B0VFN9 Electron transport complex protein rnfD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFN9_9BACT Length = 370 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 189/373 (50%), Gaps = 33/373 (8%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 F ++ +P+ H++ T +M V+LA P + ++++G+ +L+ LL +VSA++ EA++ Sbjct: 7 RFIVSPAPHFHDKTTTKNVMWNVVLALTPALIFAIYYWGFNSLLLTLLGAVSAMVTEAII 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KLRK + T+ D SA LTG+LLA +I APWW+ VLG FA+ I KQ++GGLG NP Sbjct: 67 QKLRKVPI--TVSDGSAFLTGMLLAYNINAGAPWWVPVLGAAFAIAIGKQVFGGLGNNPV 124 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G L+ S+P MT+ + + I + + N D Sbjct: 125 NPALLGRAFLMASWPTIMTAGWAKPKSG--------TLSGITDPNLIAVNLQNLSPKAYD 176 Query: 182 GISQATPLDTFKTSVRAG---------------------HSVEQIMQYPIYSGILAGAGW 220 ++ ATPL +T + + + ++ G + G Sbjct: 177 LVTGATPLKVAQTLRDSSFVSSLGANAGQGFDLANRIFTNLTDLSALKNLFWGNIGGCIG 236 Query: 221 QWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAA--PQIHLLSGA 278 + A L G +LL++ I W IPL ++ T+ + + + P H+ SG Sbjct: 237 EVSVFALLLGAAYLLYKNIIEWRIPLFYIGTVFVLSFFLAPLKGSGFSPLLPFFHIFSGG 296 Query: 279 TMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLI 338 MLGAFF+ TD T T GR+IF G+L +IR +GGYP+GV +++L N+ PLI Sbjct: 297 LMLGAFFMATDYTTTPLTKSGRIIFAIGCGILTMVIRLWGGYPEGVCYSILFMNVMTPLI 356 Query: 339 DYYTRPRVYGHRK 351 D T P+ +G K Sbjct: 357 DKLTMPKAFGRVK 369 >UniRef50_B5JR41 Electron transport complex, RnfABCDGE type, D subunit subfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR41_9BACT Length = 344 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 111/348 (31%), Positives = 170/348 (48%), Gaps = 10/348 (2%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 ++ +SPY IM V+ A +P ++ FG L +++ + LL E V Sbjct: 2 QLHTSPYLRPSASVEVIMRNVVYALLPICMFSVYQFGISVLALVIVCVGACLLTEHFVCL 61 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + +T D S ++TGLLLA+++PP P WM + ++ V + K +GGLG N NP Sbjct: 62 CSSKP--STTNDWSVVITGLLLALTLPPGFPLWMAAVASIVGVAVGKLFFGGLGYNVMNP 119 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G +F V MT+W+P ++ + F + + IDG Sbjct: 120 ALVGRAFAQAAFTVPMTTWVPYLSENRFTEFIPSSLTLPFLRPIPTADWVAE--NAIDGF 177 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 + ATPL K S++ + G AG+ + L L G +L+ ++ + W Sbjct: 178 AGATPLALMKFEQVPTDSIQ------MLLGTTAGSSGETSALLILLCGAYLVMRRMMNWR 231 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 I S L+T A + +L +PE P L SG MLGA F+ TD V + T G I+ Sbjct: 232 ITASVLLTAAATSGAFYLLNPEIYPDPLFTLCSGGLMLGAVFMATDMVASPVTPWGIWIY 291 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GA G + +IR FGG P+GV +A+LLAN PLI T+P++YG K Sbjct: 292 GAFIGFVTVIIRLFGGLPEGVMYAILLANAASPLISAATQPKIYGAVK 339 >UniRef50_C0WAW4 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAW4_9FIRM Length = 336 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 111/351 (31%), Positives = 181/351 (51%), Gaps = 37/351 (10%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + SSP+ H + M V+LA VP I A +++F + ++ VSA++ E + K+ Sbjct: 13 VTSSPHMHCGLTIGKSMREVMLALVPAIIASVYYFRMSAAIVMVTCVVSAIVFETICNKV 72 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + T++D SA LTGLLLA+ +P P +G++FA+++ K ++GGLG N FNPA Sbjct: 73 MHKP--NTVQDGSAALTGLLLAMCLPASMPPLFAAMGSMFAIVVGKAVFGGLGCNIFNPA 130 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 IG +LL SFP QMT+W+ P A + D +S Sbjct: 131 HIGRAILLASFPQQMTNWVLPATAAAS-----------------------------DAVS 161 Query: 185 QATPLDTFKT------SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 ATPL + + A + + ++ G + G+ + A + GG++L+++K Sbjct: 162 TATPLAVMRATEKIWQAGGAASAAKLPDLMNLFWGNVGGSLGETCVPALVLGGLYLIYKK 221 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I W IP+ +LVT+A+ + P HL +G M+GAFF+ TD VT+ T + Sbjct: 222 LIDWRIPVFYLVTVAILTGVYGAVMGYPSTFPLYHLFAGGLMIGAFFMATDWVTSPITKK 281 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G++I+ G+L LIR G Y +GV +++L+ N+ P+ID + R +G Sbjct: 282 GKIIYAIGLGVLTSLIRLRGSYTEGVCYSILMMNMVTPMIDRFVRNVSFGG 332 >UniRef50_C1SKX3 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKX3_9BACT Length = 332 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 127/352 (36%), Positives = 199/352 (56%), Gaps = 31/352 (8%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + SP+ + T+ +M+LV+ A +P + ++++G + L+ + E L Sbjct: 8 KLLVTFSPHDRDPMTTNVVMMLVVAALMPSVIGSIYYYGHYAVKGYLVTIFFCIAFEYLF 67 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ + +KDNSALLTG+LLA+++P APWW++++G+ A++I+K +YGGLGQNPF Sbjct: 68 DKISHRKTQ--IKDNSALLTGVLLAMNMPAGAPWWLMLIGSFVAIVISKAVYGGLGQNPF 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G V LLI++P +MT+W+ P + L D Sbjct: 126 NPALVGRVFLLIAWPAEMTAWIVPQTV--------------------------KNGLVFD 159 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPI---YSGILAGAGWQWVNLAWLAGGVWLLWQK 238 +S ATPL + K + + V P+ G ++G+ L L GG+ LL Q+ Sbjct: 160 AVSTATPLGSMKADLLSQGHVVAGNIAPLTNQLIGNVSGSLGGDSALLVLIGGLVLLQQR 219 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I WHIP+SF+ T+ + + W +PE P +H++SG MLGAFF+ TD VT+ + R Sbjct: 220 IISWHIPVSFIGTVFVLTGIYWGIAPEMTINPLMHVVSGGVMLGAFFMATDYVTSPMSKR 279 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +LIFG GL+ +IR FG YP+GV FA+L+ N VPL+D Y RP+ +G + Sbjct: 280 AQLIFGFGCGLITVVIRLFGSYPEGVGFAILIMNAFVPLLDNYMRPKSFGEK 331 >UniRef50_B3EJT7 Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Chlorobiaceae RepID=B3EJT7_CHLPB Length = 331 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 118/339 (34%), Positives = 184/339 (54%), Gaps = 29/339 (8%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 +++++P+ ++ +M V LA P ++ FG LV ++ +S + E L+ Sbjct: 6 LKVSNAPFVRSKDSIESVMYNVALALAPATVMSVYLFGMRALVLTVVCILSCIAFEWLMD 65 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K R + + D SAL+TGLLLA+++P P WMVV G+ A++ K ++GGLG N FN Sbjct: 66 KARNKP--NSCLDGSALVTGLLLALNVPANLPLWMVVTGSFIAIVATKHVFGGLGYNVFN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA++ V LLISFP MTSW P + + +D Sbjct: 124 PALVARVFLLISFPAAMTSWPMPAPF--------------------------SFDMMVDM 157 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + A+PL KT ++ + + G + G+ + LA LAG VWL ++K I Sbjct: 158 ETGASPLGILKTDGVQA-ALASLSLMDGFYGTMTGSLGETSALALLAGAVWLWYKKYITM 216 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 +IPL+ + ++ L L L P T A+P H+++G +LGAFF+ TD VT+ + RG+L+ Sbjct: 217 YIPLTIMGSVFLFTGLFHLIDPGTYASPAFHMVTGGLILGAFFMATDMVTSPLSIRGQLL 276 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 FG GLL +IR +GGYP+G++FA+L+ N VPLID + Sbjct: 277 FGLGCGLLTAVIRLWGGYPEGISFAILIMNSFVPLIDRW 315 >UniRef50_UPI0001BC5C0E Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Fusobacterium RepID=UPI0001BC5C0E Length = 317 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 47/353 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ SP+ +M V++A +P ++ FG ++ +A ++ L+ E + Sbjct: 4 ILKMGPSPHIRTSETVESVMYDVIIALIPAFLIAVYVFGLRAIIVTGVAVLTCLVTEYIC 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ KQ + ++ D SA+LTG+L + IP + P V++G + A+ + K +YGGLG N F Sbjct: 64 QKIMKQDI--SIFDGSAVLTGILFSFVIPVIMPLPYVIIGCIIAIALGKMVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + S+PV +T++ D Sbjct: 122 NPALVGRAFVQASWPVAITTF------------------------------------AYD 145 Query: 182 GISQATPLDTFKTSVRAGHSV---EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 G + AT LD K + + + G + G + LA + GG +L+++K Sbjct: 146 GRTGATMLDAMKRGLDINTVLIANSGNLYLDALIGKMGGCLGETSALALILGGCYLIYKK 205 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I W +P + T+ + A P + +LSG MLGAFF+ TD VT+ T++ Sbjct: 206 QIDWKVPAVMIGTVFVMTWAMGA------ADPIMQILSGGLMLGAFFMATDMVTSPHTDK 259 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GR++F G LV IR GGYP+G A+A+L+ N VPLI+ Y RP+ +G K Sbjct: 260 GRVVFAFGIGFLVSCIRMKGGYPEGTAYAILIMNGVVPLINRYIRPKKFGEVK 312 >UniRef50_B8D8R7 Electron transport complex protein rnfD n=4 Tax=Buchnera aphidicola RepID=RNFD_BUCA5 Length = 347 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 142/343 (41%), Positives = 211/343 (61%) Query: 9 PYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQS 68 P ++ +IM LV++A +PGI A+ +FFG GTL+QI + +L+ E ++LK+R ++ Sbjct: 4 PCIYHVYSIRKIMFLVIVACLPGIFAKYYFFGIGTLIQIFFSIFISLVLEIIILKIRSKN 63 Query: 69 VAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGY 128 + L+D S +LT +L VSIPPL PWWM +G FA+++AK LYGG+GQN FNPAM+GY Sbjct: 64 IKNYLQDTSLVLTSVLFGVSIPPLLPWWMTSIGLFFAIVVAKHLYGGIGQNIFNPAMVGY 123 Query: 129 VVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATP 188 VLLISFPV M +W F + +IF + + + L + D + ATP Sbjct: 124 AVLLISFPVYMNNWNERDFSLSFFNDFKKSAYIIFFKNDITTVSSSYLNIIPDAFTTATP 183 Query: 189 LDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 L+ FK + W+ +N+++ GG++LL+ K I W IP+SF Sbjct: 184 LNNFKIKSHLKDDFFLKENIIKNKEVSIQTSWKCINISFFLGGIFLLFTKIICWRIPISF 243 Query: 249 LVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAG 308 L +L + +++ + +S E +PQ+H SG TM+ AFFI TDPVTA+ N G+++FG + G Sbjct: 244 LSSLGMLSIITYFYSKELFMSPQVHFFSGGTMICAFFIATDPVTAACNNVGKIVFGIIIG 303 Query: 309 LLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 LVW+IR++ YPD +AF+VL AN+TVPL+DYYT+ YG Sbjct: 304 FLVWIIRNYSDYPDAIAFSVLFANMTVPLVDYYTKSSGYGRNN 346 >UniRef50_Q0TQI7 Electron transport complex, RnfABCDGE type, D subunit n=14 Tax=Bacteria RepID=Q0TQI7_CLOP1 Length = 326 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 184/349 (52%), Gaps = 44/349 (12%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + SSP+ ++ T IM VL+A +P + FG + I ++SA+++E Sbjct: 22 LLVDSSPHIKDKLSTQSIMRDVLIALIPTSLVGVLVFGLRAIFIIATCAISAVISEYAFQ 81 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K+ K+ + T+KD SA++TG+LLA+++P P W+ +G++ A+++ KQ++GG+G N N Sbjct: 82 KITKKEI--TIKDLSAIVTGVLLALNLPINTPLWVACIGSIVAIVLVKQIFGGIGCNFMN 139 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ LL ++P ++ + +DG Sbjct: 140 PALAARAFLLAAWPESISIFT------------------------------------LDG 163 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 ++ ATPL K S+ + G +AG + +LA L G ++LL++K I W Sbjct: 164 VTTATPLALLKNGQGNLPSLSN-----AFLGNIAGCIGEVSSLAILIGALYLLYRKVITW 218 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 HIPL ++ T+ + + + + +G LGAFF+ TD VT+ T +G++I Sbjct: 219 HIPLVYIGTVLILTTVIGR-NGFLSGNGIYEIFTGGLFLGAFFMATDYVTSPLTKKGQII 277 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F GL+ LIR FGGYP+GV++++LL N+ VP+IDYY +P+ +G+ K Sbjct: 278 FAFGCGLITTLIRIFGGYPEGVSYSILLMNLLVPVIDYYIKPKAFGNEK 326 >UniRef50_Q89AW7 Electron transport complex protein rnfD n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RNFD_BUCBP Length = 354 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 147/343 (42%), Positives = 218/343 (63%), Gaps = 2/343 (0%) Query: 11 THNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVA 70 ++ + TS IMLLV AAVPGI ++++FG+G L QILL+ ++ E LV +LRKQ+V Sbjct: 10 FYHHKNTSEIMLLVFCAAVPGICTEIYYFGFGVLFQILLSVFFSVSFEFLVKRLRKQTVK 69 Query: 71 ATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVV 130 + DNSA +TG+L+ +S+P L+PWW+ G F+++IAKQ+YGGLG N FNPAM GY + Sbjct: 70 SLFSDNSAAVTGVLIGISLPSLSPWWLSFFGAFFSIVIAKQIYGGLGNNIFNPAMTGYSI 129 Query: 131 LLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDM-NTLRLGIDGISQATPL 189 LL+SFP+ MT+W + N+ + VIF + + ++ I+QATPL Sbjct: 130 LLVSFPILMTNWSFQNSSYFNLFDLNNTFSVIFCTDINHYYSLIDEFQMMYKFITQATPL 189 Query: 190 DTFKTS-VRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 + +T + + ++ I ++ Y+ W +N+++L GG+ LL I W IP+S Sbjct: 190 EQIRTHVLDFNNKIDNIFEFVNYNYYFKNWKWISINISFLIGGIVLLGFNVICWRIPVSI 249 Query: 249 LVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAG 308 L +L + L + F +++ P + L G+TM FFI TDPVT S T GR++FG + G Sbjct: 250 LFSLYVFFALDYYFFKKSMYYPIMQLFFGSTMFSVFFIATDPVTTSITKIGRIVFGCIVG 309 Query: 309 LLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 L+WLIRSFG YPD +AF++LL+N VPLID+YT+PRVYG+ K Sbjct: 310 FLIWLIRSFGNYPDAIAFSILLSNSIVPLIDHYTQPRVYGYVK 352 >UniRef50_C4L9H7 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9H7_TOLAT Length = 326 Score = 289 bits (741), Expect = 7e-77, Method: Composition-based stats. Identities = 134/342 (39%), Positives = 187/342 (54%), Gaps = 28/342 (8%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 +P+ H ++M V +A +P + + FG L ++ +SAL E + LKL + Sbjct: 6 APHAHEGISIKKVMFKVNIALLPAVLLGILQFGMPALFLVVTTILSALACEVISLKLNPR 65 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 + D +A+LT L+LA+S+PP AP W+ LG+ FA+ KQ+YGGLGQN FNPAM+ Sbjct: 66 -AQGKINDGAAILTALILAMSLPPHAPLWLGALGSAFAIFFGKQVYGGLGQNLFNPAMLA 124 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 VVLLISFPV+MT W+ P I ++G+DG+S AT Sbjct: 125 RVVLLISFPVEMTKWITPSAFYDGIW----------------------YKMGVDGVSGAT 162 Query: 188 PLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 L K G G G+ + + L GGVWL+ Q+ WH+PL+ Sbjct: 163 TLGLSKEGAETG-----FHWLSHVLGTSTGSLGETSAMLMLLGGVWLIHQQVFTWHVPLA 217 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L L WL P + P L SG ++ AFFI TDPVT T+NRG+LIFGA Sbjct: 218 TLAGCLLPGTAMWLSDPAAIPEPLAQLTSGGLLMCAFFIATDPVTTPTSNRGKLIFGAGT 277 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G L+++IR+FG +P+GVAF++L+ N PLID YTRPR+YG+ Sbjct: 278 GFLIFVIRAFGNFPEGVAFSILIMNAVTPLIDQYTRPRMYGY 319 >UniRef50_A9BJD1 Electron transport complex, RnfABCDGE type, D subunit n=12 Tax=Thermotogaceae RepID=A9BJD1_PETMO Length = 326 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 116/353 (32%), Positives = 191/353 (54%), Gaps = 33/353 (9%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSA-LLAEA 59 M ++P+ T +IM+ VL++ +P + A W FG+ L +L + V A +L + Sbjct: 1 MNLSTEAAPHFRTTNTTRKIMIDVLISLIPAVIASTWIFGFRALFIMLFSMVFAEMLDFS 60 Query: 60 LVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQN 119 +V +RKQ + D SA +TGLLL +++ WW ++LG V A+I+AKQ++GGLGQN Sbjct: 61 IVRFIRKQK--DHIPDFSASVTGLLLGMNLSLAVNWWQIMLGVVIAIILAKQVFGGLGQN 118 Query: 120 PFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLG 179 FNPA++G +LISFP MT+W P Sbjct: 119 FFNPALVGRAFMLISFPTAMTTWYVPFYY-----------------------------QN 149 Query: 180 IDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 D ++ A+ L + ++ + ++ G + G+ + LA + G ++L+ + Sbjct: 150 PDIVTSASVLGII-SEEGMSTVLQNYTYWDMFIGTIPGSIGEVSALALIIGFIYLVIKGR 208 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I+ IP+S++ T+ + + + ++ P P HLL+G +LGA F+ TD VT+ T G Sbjct: 209 IKLMIPVSYIGTVLIFSSVFYMVDPTKFGTPLFHLLAGGLILGALFMATDMVTSPMTKMG 268 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +L+FG AG+L +IR FG YP+GV+F++L+ N VPLID + +P++YG KG Sbjct: 269 QLVFGVGAGILTMIIRFFGSYPEGVSFSILIMNAFVPLIDDWLKPKIYGTTKG 321 >UniRef50_A9KRW8 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Clostridiales RepID=A9KRW8_CLOPH Length = 336 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 108/347 (31%), Positives = 176/347 (50%), Gaps = 22/347 (6%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++ +++SP+ + T++IM V +A +P ++ FG+ + +L++ S +++E L Sbjct: 4 MYNVSASPHVRSGVTTAQIMRDVAIALMPACLFGIYQFGFSAFLVLLVSVTSCVVSEFLY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 +L K + SAL+TGLL+ +++P P W+ ++G VFA+I+ KQLYGGLGQN Sbjct: 64 ERLMKHPYRPY--ECSALVTGLLIGMNMPATIPVWIPMVGGVFAIIVVKQLYGGLGQNFM 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ L I F +MT++ + N G+D Sbjct: 122 NPALAARCFLSICFTSRMTTFAVDAFTNSGTSS-------------RTLYLFNYGYAGLD 168 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 G+S ATPL K S A ++ G G + + L G +LL+++ I Sbjct: 169 GVSGATPLAAMKASEAAP------SLLDMFFGFHGGVIGETSAMMLLIGACYLLYRRIIS 222 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPL+++ T A+ +L + +L G +LGAFF+ TD VT T G++ Sbjct: 223 LRIPLTYIATFAVFIILFS-GKGFDVEYVLAQILGGGLILGAFFMATDYVTCPITKYGQI 281 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 +FG G L L R FGG +GV++A++ N+ VPLI+ T PR +G Sbjct: 282 LFGVCLGALTGLFRVFGGSAEGVSYAIIFCNLLVPLIEKITMPRGFG 328 >UniRef50_Q9EVN4 Electron transport complex protein rnfD n=20 Tax=Proteobacteria RepID=RNFD_PSEST Length = 354 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 195/342 (57%), Gaps = 18/342 (5%) Query: 14 QRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATL 73 + RIML V LA +P A L+ FGW + LL SA+ EA L L L Sbjct: 3 RSSVDRIMLHVCLALLPTTAWGLYLFGWPAIYLWLLTCASAVACEAACLYLLG-RPLRRL 61 Query: 74 KDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLI 133 D SALL+G LLA+++PP APWW+ V G++FA+ I KQLYGG+GQN FNPAM+ V LLI Sbjct: 62 LDGSALLSGWLLALTLPPWAPWWIAVGGSMFAIGIGKQLYGGVGQNVFNPAMLARVALLI 121 Query: 134 SFPVQMTSWLPPHEIAVN-IPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 +FP+QMT+W P + PG+++ +++ F+G + DG+S AT L Sbjct: 122 AFPLQMTTWALPLPLGTEGAPGWLEGLRITFAGGALA-----------DGLSGATALGHL 170 Query: 193 KTSVRAGHSVEQIM-----QYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 +T + GHS QI+ P + G G+ + L L GG+WLL + I W IPL Sbjct: 171 QTELTLGHSAAQILDGHFALLPAFLGYSGGSLGETSELLILLGGLWLLALRIIHWEIPLG 230 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L+T+ A L P+ HL SG +LGA FI TDPVT+ + GRLIF Sbjct: 231 MLLTVGALAALANQIDPQVHGGGLFHLTSGGLLLGALFIATDPVTSPISRSGRLIFAIGC 290 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G LV++IRS+G +P+ VAFAVLL N VPLID RPR YG Sbjct: 291 GALVFVIRSWGNFPEAVAFAVLLMNALVPLIDRVCRPRAYGR 332 >UniRef50_D2RN95 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RN95_ACIFE Length = 344 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 181/347 (52%), Gaps = 21/347 (6%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++SSP+ H S+ M V+LA VP + A +++F + I+ +SA++ E L K+ Sbjct: 13 VSSSPHMHCGLTISKSMREVILALVPAVLASVYYFRVDAVRVIVCCVLSAIIFEKLANKV 72 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 T+KD SA LTGLLLA+ +P P +M VLG +FAV+I K ++GGLG+N FNPA Sbjct: 73 MGVK-KDTVKDGSAALTGLLLALCLPASLPSYMAVLGGMFAVVIGKAIFGGLGKNIFNPA 131 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTL--RLGIDG 182 IG +LL SFP QMT+W+ P A + + + M + G Sbjct: 132 HIGRAILLASFPQQMTTWVIPATKAAAVTAATAGADATTAATPLAVMRMTEKVWQAGGAA 191 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 SQ PL ++ G + G+ + A + GG++L+W+K I W Sbjct: 192 ASQLPPLS------------------DLFMGNVGGSLGETCVPALVLGGLYLIWKKLIDW 233 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP+ +L T+A+ + P HL +G M+GAFF+ TD VT+ T +G++I Sbjct: 234 RIPVFYLATVAVLTGIYGAVMGYPSTFPLYHLFAGGLMIGAFFMATDWVTSPITKKGKII 293 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 + G+L LIR G Y +GV +++L+ N+ P+ID + R +G Sbjct: 294 YAIGLGVLTSLIRLRGSYTEGVCYSILMMNMVTPMIDRFVRNVSFGG 340 >UniRef50_Q1Q5X4 Conserved hypothetical electron transport protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5X4_9BACT Length = 343 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 192/350 (54%), Gaps = 22/350 (6%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++SSP+ + S IM V+L+ +P A ++ FG+ L I L ++AL+ E ++ Sbjct: 11 LIVSSSPHMRDNDSISHIMWTVVLSLLPAGFAAIFVFGYYVLFVIGLCCLTALVTEIVIS 70 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 ++KQ A +KD SA++T +LLA ++PP APW++ V+G+ FA+ + K +GGLG N +N Sbjct: 71 LMKKQPAFAMIKDGSAIVTAILLAYTLPPGAPWYVPVVGSFFAIAVVKHSFGGLGNNIWN 130 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ L +++PV + S + + SG +D Sbjct: 131 PALAARAFLQVAYPVSVNSDWRFFSDPGAMNVLKNITSTGESGLL------------LDA 178 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +++ATPL E Y + G + G + +A LAGG++LL++K I+W Sbjct: 179 VTRATPLA-------KESGAELYNFYQLLIGSVPGCIGETSAIALLAGGLYLLYKKCIKW 231 Query: 243 HIPLSFLVTLALCAMLG--WLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 ++P+++L+T+ + ++ +P P HL +G LGAFF+ TD VT T +G Sbjct: 232 YVPVAYLLTVFVVSIFLPPRTITPWAN-NPFYHLFAGGLFLGAFFMATDMVTTPLTKKGM 290 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 LIF AGLL LIR + GYP+GV +++L+ N PLID +T+PR+YG + Sbjct: 291 LIFSVGAGLLTILIRFYSGYPEGVCYSILIMNTATPLIDRFTKPRLYGSK 340 >UniRef50_Q5P536 Electron transport complex protein rnfD (Nitrogen fixation protein rnfD) n=4 Tax=Bacteria RepID=Q5P536_AZOSE Length = 362 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 142/349 (40%), Positives = 192/349 (55%), Gaps = 19/349 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 +SP+ H +R M V LA +P W FGW + + + +L E + +L + Sbjct: 11 ASPHAHGGASIARTMRHVQLALLPATLFGFWLFGWPAVHLFAVTVGACVLTELVCQRLMR 70 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 V ++L D SALLTG LLA+S+PP AP W+ LG A+ I KQL+GGLGQN FNPAM+ Sbjct: 71 --VESSLGDGSALLTGWLLALSLPPWAPAWIGALGGFIAIAIGKQLFGGLGQNLFNPAMV 128 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVN-IPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQ 185 V LL+SFPV MT W+ P + + P F + + + + D I+ Sbjct: 129 ARVALLVSFPVVMTQWVAPLPMTADGAPAFGEGLWITLASPPVP-----------DAIAS 177 Query: 186 ATPLDTFKTSVRAGHSVEQIMQYP-----IYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 A+ L KT + G V + + G AG+ + + LAGG++LL I Sbjct: 178 ASLLGHAKTELSRGVDVLHAIGAATDPLFSWVGSRAGSLGETGAIFLLAGGLYLLATGVI 237 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RWHIPL+ L LA+ A +G P HLLSGA +LGAFFI TD VT+ T G+ Sbjct: 238 RWHIPLAVLAGLAIPAAIGHALDPAHYLPASAHLLSGAAILGAFFIATDYVTSPNTTFGQ 297 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 L+FG G L W+IRS+GGYP+G+AFAVLL N P+ID Y RPR+ G Sbjct: 298 LVFGFGIGFLTWIIRSWGGYPEGMAFAVLLLNALTPVIDRYCRPRILGR 346 >UniRef50_Q2LXU1 Sodium-translocating NADH-quinone reductase subunit B n=7 Tax=Bacteria RepID=Q2LXU1_SYNAS Length = 350 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 119/355 (33%), Positives = 190/355 (53%), Gaps = 29/355 (8%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++ SP+ ++ T++IM +V +P + ++ FG+ TL+ L++ +S +L EA+ Sbjct: 17 LTVSLSPHVKSRESTAKIMWMVNACLLPPLVLSVFIFGFQTLIITLISVLSCVLTEAVSQ 76 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KL + + T+KD SA++TGLLLA IPP P+WM +LG +FA+ I K L+GGLG N FN Sbjct: 77 KLLHRPI--TIKDGSAVITGLLLAYVIPPGVPYWMPILGAIFAIYITKHLFGGLGFNIFN 134 Query: 123 PAMIGYVVLLISFPVQMTS-WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 PA+IG L+ +FPV MTS W+ P + ++ G+D Sbjct: 135 PALIGRAFLVATFPVAMTSAWILPIQDFA---------------------IFKYMQPGVD 173 Query: 182 GISQATPLDTFK----TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQ 237 +S ATPL K ++ + + + G+ G + NL L GG +L+++ Sbjct: 174 AVSTATPLYVLKHYGLAALIEKYGTLSTVYKDFFLGVRPGCIGETSNLLLLLGGAFLIYK 233 Query: 238 KAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTN 297 + I WHIP+S + ++ L + P + +LSG LGA F+ TD VTA T Sbjct: 234 RYISWHIPVSTIASVGLLTWIFG-GEGYFNGDPILAVLSGGIFLGAIFMATDYVTAPTQK 292 Query: 298 RGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +L+FG G + LIR GGYP+G+ +A+LL N P ++ + +P+ + KG Sbjct: 293 TAQLVFGIGVGAITVLIRLKGGYPEGICYAILLMNTLTPALESWFKPKRFAPAKG 347 >UniRef50_B0PD31 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0PD31_9FIRM Length = 320 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 175/347 (50%), Gaps = 45/347 (12%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 I SP+ + T +IML V +A +P + A +WFFG L + V ++L E L Sbjct: 12 KLMITPSPHVKDGISTRKIMLTVSVALMPSLIAAIWFFGLRALALTAVCVVFSVLFEYLF 71 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ K+ T+ D SA++TG++L+ ++P P+WM G+ A+++ K L+GG+G N Sbjct: 72 NKVTKRE--QTIGDCSAVVTGIILSFNLPVTLPFWMAAFGSFMAIVVVKCLFGGIGCNFA 129 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA V LL+SF QMT+W+ P G+D Sbjct: 130 NPAATARVFLLVSFGGQMTTWVAPR--------------------------------GVD 157 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++ ATPL T G + + + G G+ + +A + GGV+L+W+ I Sbjct: 158 AMATATPLTLIST----GQTDALPSLWQMLIGQRGGSMGETCAIALIIGGVFLIWRGIIG 213 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP++ + ++ + A+L P +LSG M+ AFF+ TD T+ T +G++ Sbjct: 214 WEIPVTLIASIFVFALLFG-------QDPFYAILSGGVMIAAFFMATDYSTSPVTTKGKV 266 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 +F G + +IRSF YP+G++FA+LL NI P ID T + +G Sbjct: 267 VFAIGIGFITMVIRSFCNYPEGMSFAILLMNILTPHIDSLTITKPFG 313 >UniRef50_Q3B3R3 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B3R3_PELLD Length = 324 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 115/341 (33%), Positives = 183/341 (53%), Gaps = 36/341 (10%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 + +++ +P+ ++ +M V LA +P A +++FG L+ L A +++ E + Sbjct: 4 LKLKVSYAPFVRSKDSIESVMYNVALALLPATALSVYYFGIPALLVTLTAIAASIAFEWM 63 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 ++R++ + D SA++TGLLLA+++P P WMVVLG A+++ K L+GGLG N Sbjct: 64 TDRIRRKP--DSCFDGSAVVTGLLLALNVPSGLPLWMVVLGAFVAIVVTKHLFGGLGFNI 121 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPA++ V LLISFPV MTSW P + Sbjct: 122 FNPALVARVFLLISFPVAMTSWPVPF--------------------------------AV 149 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D + A+PL KT + +++ G G+ + LA L G WL +++ I Sbjct: 150 DMQTAASPLGILKTDGLS--ALQGFSYMDALLGKTGGSLGETSALALLIGAAWLFYKRYI 207 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 IPL+F+ A+ + +L P T A P H+L+G +LGAFF+ TD VT+ + RG+ Sbjct: 208 TLTIPLTFIAVTAVFTGIFYLIDPSTYATPLFHILTGGLILGAFFMATDMVTSPMSMRGQ 267 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 L+F G+L +IR +GGYP+GV+FA+L+ N VPL+D + Sbjct: 268 LVFAGGCGILTAVIRLWGGYPEGVSFAILIMNSLVPLLDRW 308 >UniRef50_C9XNL3 Electron transport complex protein n=9 Tax=Bacteria RepID=C9XNL3_CLODC Length = 325 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 33/351 (9%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + TS IM V++A +P A ++FF L + + + E L Sbjct: 4 KLIVSSSPHVRSNEDTSYIMKQVIIALLPAAVAGVYFFRLNALSAMFFCILGTVGTEFLY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K KQ +T+ D SA++TGLLLA ++P PWWM ++G +FA+++ K ++GG+G N Sbjct: 64 QKFTKQK--STIGDFSAVVTGLLLAFNVPASLPWWMCLVGGIFAILVVKMVFGGIGCNFV 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ LL SFPV MT+W P +N + +D Sbjct: 122 NPALAARAFLLASFPVAMTAWTQPG--------------------------VNWIGKNLD 155 Query: 182 GISQATPLDTFKTSVR--AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 ++ ATPL K A S I + G + G + + L GGV+L+++ Sbjct: 156 AVTTATPLSFLKNGAAGLADLSSNGISLADMMIGNIGGCIGETSAILLLLGGVYLMYKGI 215 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I + IP+ ++ T+ + L F+ + L +G MLG FF+LTD T+ T +G Sbjct: 216 INYVIPVFYIATVFILTFLLGGFN---ITFAIYQLFAGGLMLGGFFMLTDYTTSPMTKKG 272 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++I+ LAGL+ +IR +GGYP+GV++++LL N PLID + R RV+G Sbjct: 273 QIIYAVLAGLITTVIRMYGGYPEGVSYSILLVNCLAPLIDKFVRNRVFGEV 323 >UniRef50_A6TQH0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TQH0_ALKMQ Length = 317 Score = 282 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 199/350 (56%), Gaps = 40/350 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + TS++ML V++A +P A +++F + LA ++A+LAEA+V Sbjct: 4 RLVVSSSPHILGEDTTSKMMLDVIIALLPATIAAMFYFRSSAAFIVALAIITAVLAEAVV 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+RKQ V T+KD SA++TGLLLA+++P APWW+ V+G+ FA+II KQ++GG+GQN Sbjct: 64 QKIRKQPV--TIKDLSAVVTGLLLALNLPASAPWWIPVVGSAFAIIIVKQIFGGIGQNFM 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ +++ IS+P QMT W+ P G+D Sbjct: 122 NPALAARIMMTISWPEQMTRWVAP---------------------------------GVD 148 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 +S ATPL K + + ++M + G +AG+ + + + GG++L+++ I Sbjct: 149 SVSAATPLSFVKDATAVPGNAPELM--DMLFGNIAGSMGETSAILLVLGGLYLVYRGVIS 206 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IP ++ T+A+ +L F HLL G+ M+GAF++ TD + T +GR+ Sbjct: 207 IKIPAIYIGTVAVATLLYSGFD---FYFMTYHLLGGSLMIGAFYMATDYASGCVTPKGRM 263 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IF G+L +IR FGGYP+GV F++L+ N P ID +T P+VYG + Sbjct: 264 IFAFGCGVLTTVIRLFGGYPEGVGFSILIMNSMTPFIDRFTSPKVYGEVQ 313 >UniRef50_A1WT47 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT47_HALHL Length = 338 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 181/350 (51%), Gaps = 18/350 (5%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 I +SP+ RIM V+LA +P A ++ FG +++++V+A+L E L Sbjct: 4 RIEIKTSPHIKAPDSVERIMRSVVLALLPVCAFSVYQFGISVAALLVVSTVTAVLTEQLF 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 ++ + +T+ D SA++TGLLLA+++PP P WM + A+ + K L+GGLG NPF Sbjct: 64 NRMSGRP--STIGDYSAVITGLLLALTLPPAFPLWMAAVSAFVAIALGKALFGGLGYNPF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G +FP ++W + F+ + +D Sbjct: 122 NPALLGRAFAAAAFPEASSTWTQAGLSERFTEFLPSTLAAPFTTPAS-----------VD 170 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + ATPL +K + + +G +AG+ + L LA G++L+ + A+ Sbjct: 171 AYTTATPLAEWKFEGGIATET-----WDLLAGTIAGSAGETSALLVLACGLFLVLRGAVN 225 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W +P+S L + A A + + P T P L SGA MLGAFF+ +D ++ T G Sbjct: 226 WRVPVSVLGSAAATAGVFYALDPATYPDPLFVLASGALMLGAFFMASDMSSSPVTPAGIW 285 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+G L G L +IR FGG P+GV +A+LL N VPLI+ +PR+YG RK Sbjct: 286 IYGILIGFLTVIIRFFGGLPEGVMYAILLGNAAVPLIERIAQPRMYGLRK 335 >UniRef50_Q73PG2 Na(+)-translocating NADH-quinone reductase, B subunit n=2 Tax=Treponema RepID=Q73PG2_TREDE Length = 338 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 29/347 (8%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++ +P+ +T +ML V++A +P A ++ F LV+I+++ + + E+L K+ Sbjct: 11 MSPAPHVVTPVKTQTLMLDVIIALLPLTAYGIYLFSIPALVRIIVSVLCCVGFESLFRKI 70 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + + +KD SA++TGLLLA+ IPP P WM++LG FA+++AK+ +GGLG N FNPA Sbjct: 71 CRLDIR--VKDLSAVITGLLLALVIPPNLPIWMLILGCFFAIVVAKEFFGGLGANVFNPA 128 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G + SF MTSW+ P + +++I + + Sbjct: 129 LVGRAFMFASFSGAMTSWIQPGNSIFDAVSTATPLKLINAKEGIA--------------- 173 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 L + + S + + G AG + L L G +LL++K I W Sbjct: 174 ----LSASEIAKTLNLSSSTDLYTQLILGNHAGCIGETSILLILLGFAYLLFKKVIDWKT 229 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P++ ++T + + + P + L SG GA F+ TD VT+ T +G+L+FG Sbjct: 230 PVTMMLTAVVITSIAGI-------NPILTLTSGGLAFGAVFMATDYVTSPVTPKGKLLFG 282 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 A GL+ LIR F G P+GV +++L+ N VP ++ P YG+ K Sbjct: 283 AGCGLITGLIRLFSGMPEGVMYSILIMNAVVPFLNKII-PVKYGYVK 328 >UniRef50_B5YE56 RnfD/nqrB n=3 Tax=Bacteria RepID=B5YE56_DICT6 Length = 318 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 190/350 (54%), Gaps = 39/350 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ TS M V+ A +P ++FFG +L+ I+++ +S++L EAL Sbjct: 7 KLIVSSSPHIFTHEDTSYAMKQVIFALLPATLGGIYFFGIYSLIVIIVSVISSVLWEALA 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L +R++ + LKD SA++TGLLLA+ +PP P W+ ++GT A+++AKQ++GG+G+N Sbjct: 67 LYIRRKPLTI-LKDYSAVVTGLLLALILPPNVPLWIPIIGTGVAILLAKQVFGGIGENFL 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G LL S+P MTSW+ P + Sbjct: 126 NPALVGRAFLLSSYPQIMTSWVKPINGLGFMSN--------------------------- 158 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 +S ATPL K + + ++ G AG + L L GG+WL+++ I Sbjct: 159 -VSTATPLAIEKLKLAG---YSLPSYWELFIGNRAGCIGETSVLLLLLGGLWLIYKNIID 214 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP+SF++T+ + + L P H+LSG LGAFF+ TD VT T++GRL Sbjct: 215 WKIPVSFILTVFIVSFL-------VGKDPIFHILSGGLFLGAFFMATDWVTTPLTSKGRL 267 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IFG AGL +IR +G YP+GV++ +L+ N PLID +PR +G K Sbjct: 268 IFGIGAGLFTIVIRFWGAYPEGVSYGILVMNALTPLIDNLVKPRRFGEVK 317 >UniRef50_A1WTR8 Electron transport complex protein rnfD n=2 Tax=Proteobacteria RepID=RNFD_HALHL Length = 357 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 139/354 (39%), Positives = 208/354 (58%), Gaps = 17/354 (4%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 + + P+T +M VLLAA P A +W +GW L +L+ V+ L+AEA L+ Sbjct: 3 ELVAGPHTRAPLSLPTLMRQVLLAAAPATAFGVWLYGWPALNLLLITLVTVLVAEAACLR 62 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + V + L D+SAL+ G +LA+S+PP APWW+ V+G + AV++ K ++GG GQN FNP Sbjct: 63 AAGRPVRSGLGDSSALVAGWILAMSLPPWAPWWIGVIGGLLAVVLGKGVFGGTGQNLFNP 122 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNI-PGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 AM+ V LLI+FPV+MT W+ P + + PGF++++ + F+G D Sbjct: 123 AMVARVALLIAFPVEMTRWVEPAPLGSAVAPGFLESLGITFTGTAD-----------WDA 171 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYP-----IYSGILAGAGWQWVNLAWLAGGVWLLWQ 237 ++ AT LD +T+V G S+E + G G+ + L GGV+L+++ Sbjct: 172 VTGATTLDATRTAVTEGQSIETALPEAYQPALALLGYAPGSLAEGSALLLALGGVYLIYR 231 Query: 238 KAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTN 297 + I W IP L TLA+ A + P A +H+L+G+T+L AFFI TDP T+ TT Sbjct: 232 RVIAWEIPAVMLATLAVLATVFHTLDPTRYADAGVHILAGSTLLAAFFIATDPTTSPTTT 291 Query: 298 RGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GR +F A ++VW++R++GGYP+ AFAVLL N PLID++ RPRVYG + Sbjct: 292 VGRAVFAAGCAVIVWVVRTYGGYPEATAFAVLLMNAFTPLIDHWIRPRVYGRTR 345 >UniRef50_C3WYL8 Na(+)-translocating NADH-quinone reductase subunit B n=4 Tax=Fusobacterium RepID=C3WYL8_9FUSO Length = 315 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 166/352 (47%), Gaps = 48/352 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + + +P+ +M V++A +P A ++ FG L+ ++ + + E + Sbjct: 4 ILKTGPAPHIRTAETVESVMYDVVIALIPAFAMAVYSFGVRALILTAVSVATCIATEYIW 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ K+ + A D SA+LTG+L A +P V++G A+ + K +YGGLG N F Sbjct: 64 QKILKRDIEAF--DGSAILTGILFAFVVPVGMGLQYVIVGNFVAITLGKIVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+IG + S+PV +T++ D Sbjct: 122 NPALIGRAFVQASWPVAITTF------------------------------------AYD 145 Query: 182 GISQATPLDTFKTSVRAGHSV---EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 G + AT LD K + S+ + G + G + LA L GGV+L+++K Sbjct: 146 GKAGATVLDAMKRGIPLTDSLIYEGGNQYINAFLGQMGGCLGETSALALLIGGVYLIYKK 205 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I W +P + T+ + A P + +LSG LGAFF+ TD VT+ T + Sbjct: 206 QIDWKVPAVMIGTVFVLTWAMG-------ANPFMQILSGGLFLGAFFMATDMVTSPITGK 258 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 GR+IF G+LV LIR GGYP+G A+A+L+ N VPLID Y R + +G Sbjct: 259 GRVIFALGIGILVSLIRIKGGYPEGTAYAILIMNGVVPLIDRYIRAKKFGGV 310 >UniRef50_A8ZSV3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV3_DESOH Length = 337 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 185/351 (52%), Gaps = 38/351 (10%) Query: 2 VFRIASSPYTHNQR-QTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 V + A SP+ N+ T R+M VL+A +P + ++ FG + Q+++ VS L AEA+ Sbjct: 19 VLQTAPSPHLSNESFTTRRMMADVLIALIPVVGMAVYVFGMFAVKQLVICLVSCLAAEAI 78 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 ++RK+ + L D SA +TG++LA+S+P APW++ V+ + A+ I K ++GGLG N Sbjct: 79 FTRMRKRPIP--LGDGSAAITGVILALSLPGPAPWYVGVIASFVAIGIGKVIFGGLGMNI 136 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+G ++I+F M + T + Sbjct: 137 FNPAMVGRAFVMIAFAGAM-----------------------------AASGYMTAGGAV 167 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D +SQATPL F+ + ++ G G+ + LA L GG +L ++ Sbjct: 168 DAVSQATPLTLFQQEGVV------TPLFKLFIGTTNGSLGEGSALACLIGGAYLCIRRTA 221 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W IP ++ + +CA+L L +P++ HL GA + GAF+I TDPVT+ T+ G+ Sbjct: 222 SWEIPAGVILAVVVCAVLVSLANPDSEWTVLHHLFGGALLFGAFYIATDPVTSPLTSGGK 281 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +FG G ++ L+R F GYP+GV FAVLL N PLI+ + P+ +G K Sbjct: 282 FVFGLGVGAIIMLLRIFSGYPEGVMFAVLLMNAMTPLINRWMIPKPFGTVK 332 >UniRef50_C1QFU9 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Brachyspira RepID=C1QFU9_9SPIR Length = 361 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 113/357 (31%), Positives = 195/357 (54%), Gaps = 15/357 (4%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F SSP+ + T++IML V++A +P + + FG +V L A ++ +++ + Sbjct: 1 MKFYTESSPHIKDGDTTNKIMLRVIIALLPAVIYSIVLFGARVIVLYLAAIITCIVSTII 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 V K+RK+ + + D + +T +LL +++PP A MVV+G+V A++ AK+++GGLG N Sbjct: 61 VKKVRKKPL---IPDYAVTVTAILLVMTLPPSATITMVVIGSVIAIVFAKEVFGGLGSNI 117 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPA++G L ++FP QMT + PP + F+ + I T + + + Sbjct: 118 FNPALVGRAFLQVAFPAQMTMYTPPKNVP-----FLGVFENILKDFTLTVSGASQSLDAV 172 Query: 181 DGISQATPLDTFK-------TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVW 233 ++ ATPL K ++ + VE + G AGA + L L GG++ Sbjct: 173 SALTSATPLTFLKYNSIDFGGTLASQIQVESHYYLQMLLGSTAGAIGETSFLLLLIGGIF 232 Query: 234 LLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTA 293 LL I W IPL ++L + + L L P +A+P +L+G LGAFF+ TD VT+ Sbjct: 233 LLITNTIDWRIPLGMFISLVVVSFLLCLAMPGKVASPIYQVLAGGFGLGAFFMATDMVTS 292 Query: 294 STTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +++ G I+ L G ++ ++R+FG P+ + +++L+ N+ +PLI TRP +G + Sbjct: 293 PSSHLGAWIYALLIGAVLAILRTFGSSPEYMMYSILIGNMFMPLIAMLTRPLPFGKK 349 >UniRef50_A5TRQ5 NADH dehydrogenase (Ubiquinone), RnfD subunit n=8 Tax=Fusobacterium RepID=A5TRQ5_FUSNP Length = 314 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 106/351 (30%), Positives = 173/351 (49%), Gaps = 47/351 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + + +P+ +M V++A +P A ++ FG L+ ++ ++ +L E L Sbjct: 4 ILKTGPAPHIRTAETVESVMYDVIIALIPAFAMAVYTFGVRALILTAVSVLTCILTEYLC 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K K+ + A D SA+LTG+L A +P + P VV+G + A+ + K +YGGLG N F Sbjct: 64 QKALKRDIEAF--DGSAILTGILFAFVVPAIMPLQYVVVGNIVAITLGKMVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + S+PV +T++ D Sbjct: 122 NPALVGRAFVQASWPVAITTF------------------------------------AFD 145 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQY--PIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 G + AT LD K + ++ + + G + G + +LA L GG +L+++K Sbjct: 146 GKAGATVLDAMKRGIPLSDALLENTNQYIDAFLGQMGGCLGETSSLALLLGGAYLIYKKH 205 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I W +P + T+ + A P + + SG LGAFF+ TD VT+ TT++G Sbjct: 206 IDWKVPAVMIGTVFVLTWAMG-------ADPLMQIFSGGLFLGAFFMATDMVTSPTTSKG 258 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 R++F G+L+ LIR GGYP+G A+A+L+ N VPLID Y RP+ +G Sbjct: 259 RVVFALGLGILISLIRMKGGYPEGTAYAILIMNGVVPLIDRYIRPKKFGGV 309 >UniRef50_D1VUL1 Electron transport complex protein RnfD n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL1_9FIRM Length = 330 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 32/349 (9%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + ++ +P+ + +IML V++A VP I ++FFG +L I ++S++ +L E + Sbjct: 14 YFVSLAPHIRSNDTVRKIMLDVIIALVPAIIGSVYFFGMRSLFLICVSSLACVLTEYVTQ 73 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KL K+ + + D SA++TG+L+A ++P P + ++ G +FA++I K+ +GG+G N N Sbjct: 74 KLLKKPIQ--IGDLSAVVTGILIAFNVPITMPVFELIFGDIFAILIVKECFGGIGFNFMN 131 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ G +VL+ S+ +MT +L P + + +D Sbjct: 132 PALAGRLVLMASWTKRMTDYLSPEMVKNGVSSLSQ----------------------VDM 169 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +S ATPL + + + G + G + ++ L G ++L+ +K I Sbjct: 170 VSAATPLKLIGSGAYEKLP----SLFNMAIGNIGGVIGETSSILLLLGFLYLVIRKVISV 225 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP+ ++ +CA+ + P +L+G +LGA F+ TD T T +GR+I Sbjct: 226 QIPVIYIG---VCAITLVILGIPINVIP-YEILAGGLILGACFMATDYATNPITKKGRII 281 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F G L LIR P+GV++A+ L NI P+ID +TR + YG K Sbjct: 282 FAIGCGFLTALIRVKASLPEGVSYAICLMNICTPVIDKFTRTQAYGEVK 330 >UniRef50_B2A143 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A143_NATTJ Length = 315 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 110/350 (31%), Positives = 173/350 (49%), Gaps = 41/350 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + IM VL+A +P +W FGW +++ + +A+ +++ E+L+ Sbjct: 4 KLVVSSSPHLRSPETIDSIMRDVLIALIPPFIVSIWLFGWTSIIVVAVATAVSMITESLI 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + D SA +TG++ +S+PP PWW+V G A+ IAKQ++GG+G N F Sbjct: 64 VHKSLAPRKLK-GDLSAAVTGVIFGLSLPPGTPWWVVASGAFVAIFIAKQIFGGIGYNIF 122 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G +++++P +T W P E +D Sbjct: 123 NPALVGRAFVVVAWPSYLTHWTEPFE-------------------------------PVD 151 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 S+ATPL + G E + ++ G +AG+ + LA GG++LL + I Sbjct: 152 AASRATPLAF--PGMTEGSPFEIVPFTDLFVGTIAGSLGETSALAITIGGIFLLIRGHID 209 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 + +PL FL LAL + HL+SG+ GA FI T VT+ T G+L Sbjct: 210 FRVPLGFLGALALVVSIAG-------ENALFHLVSGSAFFGAIFIATCMVTSPYTKTGKL 262 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IFG G + ++R + P GV +AVLL N VP I+ YT+PRVYG Sbjct: 263 IFGIGCGAITAILRMYAAIPAGVTYAVLLMNALVPFINVYTKPRVYGEVN 312 >UniRef50_A6NPN1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN1_9BACE Length = 414 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 174/352 (49%), Gaps = 38/352 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQ-LWFFGWGTLVQILLASVSALLAEALV 61 IAS+P+ + T +ML VL+A +P + +FFG + L+++ + EAL Sbjct: 94 LTIASAPHLTTRDTTRTLMLDVLIALMPALLFSGCYFFGPRAFLVTLVSAAGCVGFEALF 153 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + ++ T+ D SA++TG+LLA ++P P+W V+LG FA+++ KQL+GGLG+N Sbjct: 154 CLITRR--RQTVDDLSAVVTGVLLAFTLPANVPYWAVLLGDFFAIVVVKQLFGGLGKNFL 211 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ G L SFP M+++ + ID Sbjct: 212 NPALAGRAFLF-SFPAVMSAFP---------------------------AVRSWEGFAID 243 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 S ATP+ + S+ + +++G+ +G+ + L GG++LL ++ IR Sbjct: 244 AQSAATPMASLHAG-----SLPSVSLLEMFTGVRSGSLGEVSAALLLLGGLYLLARRVIR 298 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPLSFL T+A+ + +L L+ G +L AFF+ TD T+ T G++ Sbjct: 299 LRIPLSFLGTVAVLSWCFPQGGNSSLDWTLYSLMGGGLLLAAFFMATDFTTSPVTFWGQV 358 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDY--YTRPRVYGHRK 351 + G G L R+FG YP+GV FAVL+ N+ ID T V+ RK Sbjct: 359 VCGVGCGALTVFRRTFGSYPEGVGFAVLVMNLLAWPIDRAALTLRSVFRRRK 410 >UniRef50_C7GZP4 Na(+)-translocating NADH-quinone reductase, B subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP4_9FIRM Length = 325 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 173/339 (51%), Gaps = 36/339 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++++P+ TS+IM +V+L+ VP ++ FG LV IL +++ L E + Sbjct: 8 LMMSTAPHIVTDTDTSKIMKMVILSLVPAGLVGVYVFGLKALVLILTCMIASTLFEYIYN 67 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KL K+ T D SA LTG+L+A ++P P M ++G A+II KQLYGG+GQN N Sbjct: 68 KLMKKE--QTAWDCSAALTGMLIAYNVPSSLPIPMAIVGCFVAIIIVKQLYGGIGQNLVN 125 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ +VL+ SF QMTSW P + ++ D Sbjct: 126 PAITARIVLMTSFATQMTSWPVPRGSKGF----------------------SFMQGFTDT 163 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + ATPL ++ G + G+ + LA LAGG +LLW++ I W Sbjct: 164 TTAATPLGVLAEGGD-----YMPSNMQLFLGNVGGSLGEVSALALLAGGAFLLWKRIITW 218 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 HIP++++VT+ ++L P HL +G MLGA F+ TD VT+ T G++I Sbjct: 219 HIPVAYMVTVVAISLLLG-------QDPIFHLCAGGVMLGAIFMATDYVTSPTIVSGKII 271 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 FG A L+ +IR +G P+GV+F +LL NI P +D Sbjct: 272 FGVGAALIAMVIRLYGQMPEGVSFGILLMNILTPHVDKL 310 >UniRef50_Q3SHB5 Electron transport complex, RnfABCDGE type, D subunit n=7 Tax=Betaproteobacteria RepID=Q3SHB5_THIDA Length = 342 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 157/345 (45%), Positives = 225/345 (65%), Gaps = 9/345 (2%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 SPY ++ + +M VL A +PGI +W FG G L+ + +A+V+A+ AEA +LK R Sbjct: 2 PSPYILDRTSVTVVMAWVLAALLPGIGVYVWLFGPGILLTLSIATVTAVAAEAGMLKARG 61 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + L D SA++T LLA+S+P LAPWW++V GT+FA+++AK LYGGLGQN FNPAM+ Sbjct: 62 YPIKPFLGDLSAVVTAWLLALSLPSLAPWWLIVTGTLFAIVVAKHLYGGLGQNVFNPAMV 121 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 GY VL++SFPVQMT W P E+ G + +IF + +D ++ A Sbjct: 122 GYAVLIVSFPVQMTQWAGPLELTATPLGIGQSAAIIFGADVP--------KSLLDAVTMA 173 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 TPLDT +T + H+V+++++ PI+ G L G G++W+ A+L GG+ L + I W +PL Sbjct: 174 TPLDTLRTGLLQQHTVDEVVRQPIF-GYLGGTGFEWLAAAFLLGGLLLWALRIISWQVPL 232 Query: 247 SFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL 306 +FLV + L A F AP H+ + + MLGAFFI TDPV+ +TT RG+++FG Sbjct: 233 AFLVGVWLTAGFLHFFDAGRFGAPWFHVFAPSVMLGAFFIATDPVSGATTPRGKVVFGLG 292 Query: 307 AGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 AG L +IR++GG+PDGVAFA+LL N+ VPLID YT+PRVYG + Sbjct: 293 AGFLTIVIRTWGGFPDGVAFAILLMNLCVPLIDQYTQPRVYGEVR 337 >UniRef50_A7C2T7 Electron transport complex, NQR2 and RnfD n=2 Tax=Beggiatoa RepID=A7C2T7_9GAMM Length = 336 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 120/348 (34%), Positives = 183/348 (52%), Gaps = 22/348 (6%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + +SP+ T +ML V+ A +P A LWFFG L+ +L + L E Sbjct: 7 KLVVQASPFLKQGLTTQNVMLDVIYALIPVTLASLWFFGMSALMVLLASIAGTLFTEWFF 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + A +LKD SA LTGLLL +++PP P WM LG V A+ + K ++GGLG N F Sbjct: 67 S--SSPNRAESLKDGSAFLTGLLLGLTLPPSLPLWMAFLGGVVAIGLGKIVWGGLGNNLF 124 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G LL +FP MT+W + + + G+D Sbjct: 125 NPALVGRAFLLANFPNAMTTWTAQSTSLFEL--------------HPHNLSLPLFQTGVD 170 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++ ATPL K + + G +G+ + L L GG++L+ +++I Sbjct: 171 AVTSATPLGLMKFQQ------QDTPLLDLIIGTTSGSFGETGGLLILLGGIYLILRRSID 224 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP + L ++ + + + ++F P + SG +LG FF+ +DPVT+ T +G Sbjct: 225 WRIPAAILGSVIIFSGILFMFDATRYPDPFFAVFSGGLLLGTFFMASDPVTSPLTPKGAW 284 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 IFG G++V LIR+FGG+P+GV +A+LL N TVPLI+ YT+PRV+GH Sbjct: 285 IFGIGIGVIVVLIRNFGGFPEGVMYAILLMNATVPLIERYTQPRVFGH 332 >UniRef50_UPI0001C35E54 electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E54 Length = 307 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 115/349 (32%), Positives = 178/349 (51%), Gaps = 47/349 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++SSP+ +Q TS IML V +A +P A ++ FG + IL +S +L+E + Sbjct: 4 LLNVSSSPHVRDQVTTSNIMLDVAIAMIPATAYGVYQFGIKAALVILATVLSCVLSEYVY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L + V T+ D SAL+TG++LA+++PP P W+ VLG +FA+I+ KQLYGGLGQN Sbjct: 64 ETLMGKPV--TISDGSALVTGMILALNMPPGIPLWIPVLGGIFAIIVVKQLYGGLGQNFM 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ LLI+F +MT++ D Sbjct: 122 NPALAARCFLLIAFAGKMTTFT-----------------------------------YND 146 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + TPL K ++ G + G + +A L G +LL +K I Sbjct: 147 VVVSPTPLAALKAGQAVDIPA-------MFIGKIPGTIGEVSVIALLIGAAYLLIKKVIT 199 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IP ++L+T A+ + F + HL G + GAFF+ TD VT+ T +G++ Sbjct: 200 IRIPAAYLITFAVFVFI---FGQQDFTYVLAHLCGGGIIFGAFFMATDYVTSPITPKGQI 256 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +FG L G+L L R FGG +GV++A++++NI VPLI+ T P+ +G Sbjct: 257 LFGILLGVLTGLFRLFGGSAEGVSYAIIISNILVPLIEKITLPKAFGKE 305 >UniRef50_C7H9I4 Na-translocating NADH-quinone reductase, Nqr2 subunit n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9I4_9FIRM Length = 319 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 106/350 (30%), Positives = 180/350 (51%), Gaps = 45/350 (12%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 +++SP+ ++ T +M V++A P + A FG L+ ++ V+ + E L Sbjct: 4 KLIVSASPHLRSEETTQSLMANVIVALCPCVVASAIIFGARALLVTAVSVVACVAFEWLY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KL K+ A + D SA++TG++LA+++P P +++G + A+I+ KQL+GG+G N Sbjct: 64 CKLLKK--ANPISDLSAVVTGIILAMNVPVGMPIGQLIIGDLVAIIVVKQLFGGIGMNFA 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G +VL ISF M +W+ P +D Sbjct: 122 NPALVGRIVLFISFAGSMNNWVFPDA-------------------------------AVD 150 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 +S ATPL TS ++ ++ G+ G + LA L G ++++ K I Sbjct: 151 QLSSATPLAVADTS--------KLSLLDLFMGVHGGVLGETCALAILLGLIYMVATKTIS 202 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IP S++ ++ + +L S +L + +LSG M GA F+ TD VT+ T +G+L Sbjct: 203 IAIPASYIGSMF----IFYLISTGSLHGALVGILSGGLMFGAVFMATDYVTSPFTLKGKL 258 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+G G++ + IR +G Y +GV+FA+L N+ VP I+ +TR YG+ K Sbjct: 259 IYGLCLGIVTFAIRQWGSYAEGVSFALLFMNLWVPFINDWTRQTPYGYVK 308 >UniRef50_C1D7J0 Electron transport complex, NQR2 and RnfD n=3 Tax=Proteobacteria RepID=C1D7J0_LARHH Length = 347 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 113/349 (32%), Positives = 174/349 (49%), Gaps = 14/349 (4%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + SSP+ T +IM V+ A +P +W FG + +L +S +L E L+ Sbjct: 7 RLYLHSSPHLVTGHDTPKIMRHVVYALLPVTLWAIWQFGTSAFLLVLTVVLSCVLTERLI 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L+ A +D SA++TGL LA+++PP P WM + + A+ + K L+GGLG N F Sbjct: 67 LRH-----PAAPRDMSAVITGLTLALTLPPALPLWMGAVAGIVAIALGKLLFGGLGSNVF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + SFP MT+W P + + F+ +D Sbjct: 122 NPALVGRAFVQASFPAAMTTWTPAGAAGRFTELIPSTLALPFTSPDPVAA---WAAARLD 178 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 G + ATPL +K + + + S ++G+ + L +A G++L + + Sbjct: 179 GFAGATPLAAWKFAGELPGQ-----GHFLLSPGVSGSLGETSALLIVACGLYLAVRGMLN 233 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IPL+ L+ AL + F P+ L SG M GA+F+ TD VTA T RG Sbjct: 234 WRIPLAVLLGAALVSTAFGPF-PDIGNGVLFVLTSGGLMFGAWFMATDMVTAPITRRGMW 292 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++G L G L+ IR +GG +GV +A+LLAN VP I+ T+PR YG + Sbjct: 293 VYGLLIGALIVTIRFWGGASEGVMYAILLANALVPHIEALTQPRHYGRK 341 >UniRef50_C8WMP8 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Bacteria RepID=C8WMP8_EGGLE Length = 327 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 104/349 (29%), Positives = 169/349 (48%), Gaps = 43/349 (12%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 +++ P+ + T ++ML V++A VP + A FGW L+ + + + +L E L Sbjct: 9 LVLSTPPHVFDGITTQKVMLNVVIALVPTLIASFVIFGWRALLVTAVTTAACVLFEYLWC 68 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 LRK T D SA++TGLLLA ++P P +M V+G+ A+++ K+L+GG+G+N N Sbjct: 69 LLRKTP--QTAGDLSAVVTGLLLAFNLPSTIPLYMAVIGSFVAIVVVKELFGGIGRNFAN 126 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA++ +VL +SF MT++ P G+D Sbjct: 127 PAIVARIVLSVSFTAAMTNYAAPQGFL-------------------------PGATGVDA 161 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +S ATPL Q+ + G+ G + +A L G WLL + + + Sbjct: 162 VSSATPLA---------PGAAQLPFMDLLFGVHPGVLGETCGIAILLGFAWLLVTRTVTF 212 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP ++ T+ +C++L T + SG +L A F+ TD T+ TT +G++I Sbjct: 213 TIPGVYVGTVIVCSLL-------TGHDVATQVFSGGLLLCAVFMATDYTTSPTTFKGQVI 265 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F GL+ LIR +G +G A+++LL N+ VP ID T G K Sbjct: 266 FAVGLGLITCLIRFWGNMNEGAAYSILLMNLVVPYIDSLTATTPLGGEK 314 >UniRef50_B6BWH4 Na-translocating NADH-quinone reductase, Nqr2 subunit n=2 Tax=Betaproteobacteria RepID=B6BWH4_9PROT Length = 332 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 132/343 (38%), Positives = 202/343 (58%), Gaps = 16/343 (4%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 SP + + IM V+L +P + Q+ FFG+ L + AL EA+ LKLR Sbjct: 6 SPAIKERSTVNMIMFTVILGLLPALFLQIGFFGYQILGNLFFGIGFALFLEAVCLKLRNY 65 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 + + D SA +T LL +S+P P W +++G F++++AK YGG+G NPFNPAMIG Sbjct: 66 PIRPFILDGSAFVTAWLLIISVPANIPIWTLLIGIFFSIVVAKHAYGGIGSNPFNPAMIG 125 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 Y VLLISFP MT+W D ++ + ++ + D I AT Sbjct: 126 YAVLLISFPKIMTNWP-----------ISDGFEIRNFIQFSQFFSISNINEAYDAIVSAT 174 Query: 188 PLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 PLD KTS+ G V+ + + +Q + + + GG++L+++K I WH+PLS Sbjct: 175 PLDQIKTSLFLGKEVDVLP-----ISFSTLSSYQMIAILYFLGGLFLVYKKVITWHLPLS 229 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 ++++ + + L L+ T +P HLL+GAT L AFFI+TDPV++ TT +G++IFG L Sbjct: 230 LILSVYIFSGLLHLYDQNTYMSPTFHLLNGATFLAAFFIITDPVSSPTTLKGKIIFGILI 289 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 GL+ +IR++GGYPDG+AFAV+ NI VPLI+ +T+P+V+G+ Sbjct: 290 GLITVIIRNYGGYPDGIAFAVIFMNICVPLIEKFTQPKVFGYE 332 >UniRef50_C6L9Q2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9Q2_9FIRM Length = 497 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 116/332 (34%), Positives = 174/332 (52%), Gaps = 47/332 (14%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M V LA +P A ++ FG L + ++ ALL+E + KL Q V T+ D SAL+ Sbjct: 1 MYNVALALLPATAFGVYRFGLYALAIVAVSVAFALLSEYVFQKLAGQKV--TVSDGSALV 58 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TGLLL +++PP P W+ LG++FAVI KQ +GG+GQN NPA+ LLISF M+ Sbjct: 59 TGLLLGLNLPPTVPLWIPALGSIFAVIFVKQFFGGIGQNFMNPALGARCFLLISFTGIMS 118 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 + +DGIS ATPL Sbjct: 119 DY------------------------------------AVDGISGATPLAALAEG----- 137 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 +Q+ ++ G G + LA L GG++LL +K I W IP+ +LV+ A+ ++ Sbjct: 138 --QQVNLAQLFIGFTGGCIGEISTLAILIGGIYLLLKKIITWEIPVCYLVSFAIFELIFG 195 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 S T L SG MLGAFF+ TD VT+ T +G++++G L G+L ++R+FG Sbjct: 196 KGSGITFV--LAQLCSGGLMLGAFFMATDYVTSPITKKGKIVYGILLGVLTGVLRTFGAL 253 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 P+GV++A++++N+ VPLI+ T P +G+ G Sbjct: 254 PEGVSYAIIISNLLVPLIEKVTMPTAFGYENG 285 >UniRef50_A5CXQ4 Electron transport complex protein RnfD n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXQ4_VESOH Length = 314 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 150/334 (44%), Positives = 219/334 (65%), Gaps = 26/334 (7%) Query: 15 RQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLK 74 TS +M V+ A GI +FFGWG ++QI+L ++A+ E+ L R + + +++ Sbjct: 6 SSTSWMMRQVIYALALGIVVSYYFFGWGIVLQIVLGVITAVAVESAFLAFRGRDIISSIS 65 Query: 75 DNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLIS 134 D S +LT +LLA+SIP +APWW++++G FA+I KQLYGGLG N FNPAM+GYV LLIS Sbjct: 66 DGSIILTAILLAISIPNIAPWWVIIVGISFAIIFGKQLYGGLGNNLFNPAMLGYVFLLIS 125 Query: 135 FPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKT 194 +P+QM++W +N F A++V+F+ ID IS AT LD K Sbjct: 126 YPLQMSTWP------INFLSFDQALEVVFN------------LSNIDAISGATRLDEIKN 167 Query: 195 SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLAL 254 S+ +S++Q+ + W+N+ + GG++LL++K I WHIP+SFLV + + Sbjct: 168 SLSLSNSIKQLEIHFPSQ--------VWINVGFFFGGLYLLFRKIISWHIPVSFLVGIVI 219 Query: 255 CAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLI 314 ++L W+ + + Q H++ G TMLGAFFI TDPV+ASTT GR+I+G L G+L+ +I Sbjct: 220 TSVLLWISNVDLYIPMQNHIMLGGTMLGAFFIATDPVSASTTINGRIIYGFLIGVLIVII 279 Query: 315 RSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 R+FGGYPDG+AFAVLL N+TVPLID YT+P+V+G Sbjct: 280 RTFGGYPDGIAFAVLLMNMTVPLIDVYTQPKVFG 313 >UniRef50_B9Y6Y9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Y9_9FIRM Length = 459 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 88/358 (24%), Positives = 152/358 (42%), Gaps = 55/358 (15%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFF--------GWGTLVQILLASV 52 M F SP + + T RIM + L + A L+++ G ++ ++ A V Sbjct: 1 MKFNFKPSPNYRDGQSTGRIMGELTLGLLAVFAFSLYYYFTNFSASYGLRAILLMITAIV 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 SA E L K+ + +LK++ +T ++L + P ++ + + TV A+ K + Sbjct: 61 SACGTEILWCVFTKKDILNSLKNSYPWVTAIILTMMCPLSIEYYALAVATVIAIFFGKLV 120 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGD 172 +GG GQN FNPA +G + Sbjct: 121 FGGFGQNIFNPAAVGRATI---------------------------------------FA 141 Query: 173 MNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQY--------PIYSGILAGAGWQWVN 224 D ++ ATP + +S E + + ++ G+ GA + Sbjct: 142 SFAGAAAADIVTGATPTSSMAAQNWIINSAEGMSSFLKPFGGLGNMFVGLYPGAIGETSA 201 Query: 225 LAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAF 284 L L GV L +K I W +P ++L+TL + A L ++ HLL+G M GA Sbjct: 202 LVILVVGVILAIRKVIDWRVPATYLITLFVLAAGVGLMHGAPISYALFHLLTGGAMFGAV 261 Query: 285 FILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYT 342 F++TDPVT T+ GR++F ++ ++R P+GV +++L+ N+ PLI+ T Sbjct: 262 FMMTDPVTNPTSAAGRIMFAVGCAVITIVLRLRSNLPEGVMYSILIMNMLTPLIESLT 319 >UniRef50_D1U4Y0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4Y0_9DELT Length = 334 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 166/348 (47%), Gaps = 40/348 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ +P+ H R M L+A +P FFG + + +A A+ EAL Sbjct: 8 ILTVSMAPHVHCGRTIKGHMRETLIALLPATIMAAVFFGLDAVRVMAMACAVAVATEALC 67 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L ++ +A + D SALLTGLL A +P APWW+ +G ++ + K ++GGLG +P Sbjct: 68 NTLSRRDLA--VDDLSALLTGLLFAFLLPASAPWWLAAVGAAASIGLGKFIFGGLGASPL 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 P ++G+ + IS+P M + + Sbjct: 126 CPPLVGWALCRISWPEIMDT-----------------------------------NASML 150 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + A PL K +V I +++G G A LAGG +LL + I Sbjct: 151 ASTLAAPLHELKHFGL--DAVTAIDPVSLFTGHQLGGLGAVHVAALLAGGAFLLVRHHIP 208 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP +F+ L A + L P A P HLL+G + GAFF+ TDP ++ RL Sbjct: 209 WEIPAAFIAGLLATAWVYRLMDPTAYAPPLFHLLAGGAVFGAFFLATDPASSPVGRIPRL 268 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 +FG +AG++V +IR +G YPDGV FA+LLAN+ PL+D RPR +G Sbjct: 269 LFGLVAGIMVIIIRVYGIYPDGVPFAILLANLFTPLLDR-IRPRPFGG 315 >UniRef50_C4Z023 Electron transport complex protein RnfD n=38 Tax=Bacteria RepID=C4Z023_EUBE2 Length = 304 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 99/328 (30%), Positives = 159/328 (48%), Gaps = 36/328 (10%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M VL+A P + FG L++I++ V+ + EAL + V T+ D SA + Sbjct: 1 MRDVLIALTPASIFGIVNFGLDALLRIVIGIVTCVACEALYQYFMHKKV--TVTDLSAAV 58 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TGLL+A++IP ++G VFA+I+ KQL+GGLGQN NPA+ LLI++ MT Sbjct: 59 TGLLIALNIPSTLNVGFEIVGCVFAIIVVKQLFGGLGQNFMNPALAARCFLLIAYTGPMT 118 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 +++ + +D S ATPL K Sbjct: 119 NFVTSNGF-------------------------------LDAYSGATPLALLK---PGAE 144 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 S + ++ G G + + L GG++LL +K I W IP++++ A+ L Sbjct: 145 STGVVSLAKMFIGTTGGVIGETSAICLLLGGIYLLARKVINWRIPVTYVGVFAVLIFLFA 204 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 + + G +LGA F+ TD VT+ T G+++FG GLL ++ R +GG Sbjct: 205 PGHHFDVIYMLEEVCGGGLLLGAIFMATDYVTSPITPNGKIVFGCCLGLLTFIFRMYGGS 264 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYG 348 +GV++A++ N+ VPLI+ T P+ +G Sbjct: 265 AEGVSYAIIFCNLLVPLIERVTVPKSFG 292 >UniRef50_C9A8K0 RnfD protein n=3 Tax=Enterococcus casseliflavus RepID=C9A8K0_ENTCA Length = 356 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 162/347 (46%), Gaps = 26/347 (7%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 SP+ + +T +IM V+LA +P + + FG +A +A A+ + L K Sbjct: 24 PSPHIRSNDETVKIMGCVVLALLPAVLFSGYLFGLKVYGLFFIALATAFAADGIWSYLIK 83 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + D S ++T LLL +++PP APW+ V+G FAVII K+ +GG+G N NPA+ Sbjct: 84 RPFRF---DLSIVVTALLLTMNLPPTAPWYFPVIGVAFAVIIVKEFFGGIGYNFLNPALG 140 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 G +L+ F QM P +I D+ + D +S A Sbjct: 141 GRALLIGLFYNQMFLISWPDPPFGSI-----------------APDVVSQATANDVVSGA 183 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 TPL K AG ++ + G G + L L GG++L+++K I IPL Sbjct: 184 TPLAVMK----AGDTLSGSDLLDAFLGFTGGRIGETSALLLLLGGIFLVYKKIISPRIPL 239 Query: 247 SFLVTLALCAMLGW--LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 T+ L A + + H++SG MLGA ++ TD + T G +F Sbjct: 240 IIFATIGLFAFILGPEGLFTGSWQTVIGHIISGGAMLGAIYMATDYSSTPGTKAGENLFA 299 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GLLV L R FG +G+++A+L+ N PLID + R R+ G K Sbjct: 300 LGVGLLVVLFRFFGFTNEGMSYAILIMNCFTPLIDRFLRLRILGEGK 346 >UniRef50_B2A1V3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1V3_NATTJ Length = 330 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 169/348 (48%), Gaps = 40/348 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + SSP+ +++ S M V++A +P + ++F+ + I + ++A+L E +V Sbjct: 5 RLVVDSSPHLRSKKTVSVAMFDVMIALIPIVLVSIYFYQQHAIFTIAVCMITAVLTELIV 64 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KL + TL D SALLTGL +A+ W +L TV A+ +AK+ GGLG N F Sbjct: 65 RKLTNRQ--PTLNDGSALLTGLFVALLFSGTVAVWTAILATVLAIGVAKEFVGGLGWNLF 122 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ G +++I P +F D+ +D Sbjct: 123 NPAIFGRSMIIILSP-------------------------LFLWLNDLFADIYVDLGPVD 157 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++QATPL + +E + + GA + LA L GG++LL++ I Sbjct: 158 VMTQATPLAMLQGG------MEMPSYWEMLVAFPGGALSETSPLALLIGGIYLLYRGHIN 211 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP+S + T+ + +++ A P +LSG M+GAFF+ TD VT+ N+G++ Sbjct: 212 WRIPVSVIGTVVVLSLIAG-------ADPMYQVLSGGIMIGAFFMATDWVTSPINNKGKI 264 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 IFG G L L R G +GVAF++L+ N VPLID T+ + Sbjct: 265 IFGIAIGALTILFRLGLGATEGVAFSILIMNAFVPLIDKKTKHPSFSE 312 >UniRef50_Q52715 Electron transport complex protein rnfD n=1 Tax=Rhodobacter capsulatus RepID=RNFD_RHOCA Length = 358 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 111/313 (35%), Positives = 170/313 (54%), Gaps = 17/313 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 + P+TH SR ML V+ A P LW FGW + L VSA + E LK+ Sbjct: 6 AGPHTHTLFTVSRTMLTVVAALTPATLFGLWEFGWPAIFLFLTTVVSAWVFEVACLKIAD 65 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + + D SA+L+G L+A+++PP APWW+ V+G+ A++IAK L+GGLGQN FNPAM+ Sbjct: 66 KPIRPFATDGSAILSGWLVAMTLPPYAPWWVGVIGSFIAIVIAKHLFGGLGQNLFNPAMV 125 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 +L+++ PVQMT+W+ P + + P F+ + + F G D +S A Sbjct: 126 ARAMLVVALPVQMTTWIAPVGL-LEGPSFLHGLSITFLGSQE-----------FDAVSSA 173 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPI-----YSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + L K+ + AG ++ +I+ G + G+ + + GG+ LL + I Sbjct: 174 STLSHIKSQISAGATMGEILPTLADLESRLLGFVPGSLGETSTVLLALGGLLLLVTRIIT 233 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPL+ L TL + + +P+ A P +HL SG+TML AFFI TD VT+ T G+ Sbjct: 234 PTIPLAVLGTLVTLSAICSFLAPDRFAPPILHLTSGSTMLCAFFIATDYVTSPVTTAGKW 293 Query: 302 IFGALAGLLVWLI 314 ++G G LV++I Sbjct: 294 VYGIGIGTLVFVI 306 >UniRef50_Q0AAH0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAH0_ALHEH Length = 313 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 144/326 (44%), Positives = 186/326 (57%), Gaps = 20/326 (6%) Query: 20 IMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSAL 79 IM VL A VPG A WF G G V + +A V+A+ EA V LR++ A L D+S L Sbjct: 4 IMRQVLYALVPGTLALAWFQGVGVFVHLAVALVTAVAVEAAVQWLRRRPATAALSDHSVL 63 Query: 80 LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 +TG +LA+++PPLAPWW+ T+FAV+ K LYGGLG NPFNPAM+GYV+ LI+FP +M Sbjct: 64 VTGWILALAVPPLAPWWVTASATLFAVLFGKHLYGGLGFNPFNPAMVGYVMALIAFPREM 123 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAG 199 T W P G +A++ + G A +D ++ ATPLD T G Sbjct: 124 TFWFPAAAPGDWPVGAWEAVRGVLVGLDAP---------TLDALTGATPLDLLHTGAPPG 174 Query: 200 HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG 259 ++ + +G GW L +LAGG+WLL + I + IP + Sbjct: 175 GALA----------VESGPGWMVAPLLFLAGGLWLLRCRLIDFRIPAGM-LGAMALLATL 223 Query: 260 WLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG 319 P P HLL+G T+LGAFF+ TDPV+A+TT RGR ++GA G L LIR FGG Sbjct: 224 LWLLPGEQPDPLFHLLAGGTLLGAFFVATDPVSAATTARGRWVYGAGIGALALLIREFGG 283 Query: 320 YPDGVAFAVLLANITVPLIDYYTRPR 345 YPDGVAFAVLL N P IDY RPR Sbjct: 284 YPDGVAFAVLLMNGAAPFIDYCFRPR 309 >UniRef50_C9LBM8 Na(+)-translocating NADH-quinone reductase, B subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBM8_RUMHA Length = 315 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 89/348 (25%), Positives = 172/348 (49%), Gaps = 40/348 (11%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 R+ + P+ R T +M+ V ++ +P + +++FG L L+ +L E + K Sbjct: 5 RVINGPHLRTPRTTRNVMMHVTISLIPALLGAIYYFGIQALYLSGLSVAVCVLTEYIWQK 64 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + K+ V T D SA++TGLLLA ++P P W +V VF++++ KQ++GG+G N NP Sbjct: 65 ITKKQV--TAGDFSAVVTGLLLAFNMPVTVPVWALVAADVFSILVVKQMFGGIGNNFVNP 122 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G +++++++P + ++ P ++ +D + Sbjct: 123 ALMGRLLVMVAWPAAVMQYVVPRTVS------------------------------VDAV 152 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 S AT L T K+ G+S Q ++ G + GA + L L G ++ ++K + Sbjct: 153 SAATILGTAKSGAETGYSYLQ-----MFLGEMPGAMGETSKLLLLIGFAYMCYKKIVNAE 207 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 ++++ T+ + + ++L G ++G ++LTD A + +G+LI+ Sbjct: 208 AAVTYIGTVTILTFIFGP-DGLFTGDILLNLFGGGLIMGGCYMLTDYAFA--SRKGKLIY 264 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 A+AG++ IR F YP+G+ F +L AN ++ + VYG +K Sbjct: 265 AAVAGIITAAIRIFSVYPEGICFGILTANCMAGMLSVLYKKHVYGMKK 312 >UniRef50_A6L5A0 Na+-translocating NADH-quinone reductase subunit B n=31 Tax=Bacteroidetes RepID=A6L5A0_BACV8 Length = 402 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 56/368 (15%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---------------------TLVQIL 48 + H+ + RIM +V++A +P + ++ G+ L +I+ Sbjct: 47 HIHDAIDSKRIMSMVVIALIPALLFGMYNVGYQHFLAVGQEAGFFEKFIYGFLAVLPKII 106 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E +V + + + + L++GLL+ + +P P W++ + T F+VI Sbjct: 107 VSYVVGLGIEFVVAQWKNEEIQ-----EGFLVSGLLIPMIVPVECPLWILAVATAFSVIF 161 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 AK+++GG G N FNPA+I L ++P +M+ DA+ V Sbjct: 162 AKEVFGGTGMNIFNPALITRAFLFFAYPTKMSG---------------DAVWVSTDSIFG 206 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQI-----MQYPIYSGILAGAGWQWV 223 GG +DG + AT L T+ + + + + G++ G+ + Sbjct: 207 IGGGQ-----VVDGFTGATMLGQAATAAPGASELINVNGTPATMWDMVVGLIPGSIGETS 261 Query: 224 NLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----HLLSGAT 279 +A G + LLW W S + ++ +F Q+ H++ G Sbjct: 262 VIAIALGAIILLWTGVASWKTMFSVFAGGIVMGLIFNVFGSTDNMMAQLPWYEHIVLGGF 321 Query: 280 MLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLI 338 GA F+ TDPVT++ T +G+ I+G L G++ +IR GYP+G+ A+LL NI PLI Sbjct: 322 CFGAVFMATDPVTSARTEKGKFIYGFLIGVMAIVIRVLNPGYPEGMMLAILLMNIFAPLI 381 Query: 339 DYYTRPRV 346 DY + Sbjct: 382 DYCIVQKN 389 >UniRef50_C4FA61 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FA61_9ACTN Length = 310 Score = 244 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 45/351 (12%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SP+ H + T IM +V L+ +P + A ++ +G G + +L+ +AL+ E + Sbjct: 1 MNLINEASPHFHGKGSTQWIMGMVCLSLLPTLVASVFLYGLGAPLLVLVCVATALVTEHV 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L + +T D S ++T +L A ++P ++ +LGTVFA+ + K L+GG+G N Sbjct: 61 CCRLMNRE--STAGDLSCVVTAMLFAFTLPANCGYFPAILGTVFAIAVVKMLFGGIGCNF 118 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 NPA+ V ++++ P+ + ++ + + + Sbjct: 119 ANPAVTARVFIMLAMPIALGAYP------------------------------DIMGRPL 148 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D I+ ATPL + G+ AGA + + LAG V+LL + + Sbjct: 149 DAITGATPLAMNAAGDAP------YSYMDMMFGLHAGALGETCIITLLAGYVFLLVMRVV 202 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 + F+ T+A+ +LSG LGAF++ TD T T +G+ Sbjct: 203 DAWATVPFIATVAVITGFAG-------QDAIYQVLSGGLALGAFYMATDYTTTPMTPKGK 255 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +IFG G++ L+R F P+GVAF++L N+ PLID YTRP+ G K Sbjct: 256 IIFGIGCGVITALVRLFAAAPEGVAFSILFMNMFTPLIDRYTRPQPAGGVK 306 >UniRef50_C2MAM1 NADH:ubiquinone oxidoreductase, na(+)-translocating, b subunit n=16 Tax=Bacteroidales RepID=C2MAM1_9PORP Length = 407 Score = 244 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 158/371 (42%), Gaps = 49/371 (13%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---------------------TLVQIL 48 + H+ + R+M V+LA VP + ++ G L +I+ Sbjct: 48 HVHDAIDSKRVMSTVVLALVPALLFGMYNVGLQHFIAIGQTAGFWSMFWFGFLAVLPKIV 107 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E V + + + + L+TG+L+ + +P P WM+ + +V+ Sbjct: 108 VSYVVGLGIEFAVAQWKHEEIQ-----EGYLVTGMLVPMIVPVDTPLWMIAVAVAMSVVF 162 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 AK+++GG G N FN A++ +L ++P MT D + V Sbjct: 163 AKEVFGGTGYNIFNVALVTRAILFFAYPAAMTG---------------DKVFVRTEPIFG 207 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIM-----QYPIYSGILAGAGWQWV 223 GG + +DG S ATPL T+ ++ M + + G + G+ + Sbjct: 208 FGGGGDMATAAVDGFSGATPLGQVATAGDTLPTIVNTMGEPSTLWDAFWGFIPGSIGEVS 267 Query: 224 NLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFS--PETLAAPQIHLLSGATML 281 A L G + L+W + + +S +V AL +L HLL G Sbjct: 268 TFAILLGAILLIWTGVASYKVIVSGVVGAALMTLLFNAIGTTAAMQLDVAHHLLYGGFAF 327 Query: 282 GAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDY 340 G F+ TDPVT++ T G+ I+G L G++ IR GYP+G+ A+LL N+ PLIDY Sbjct: 328 GLVFMATDPVTSARTETGKWIYGLLVGVMCVFIRVLNPGYPEGMMLAILLMNVFAPLIDY 387 Query: 341 YTRPRVYGHRK 351 RK Sbjct: 388 VVVNNNISKRK 398 >UniRef50_Q4K755 Electron transport complex, RnfABCDGE type, D subunit n=7 Tax=Pseudomonas RepID=Q4K755_PSEF5 Length = 330 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 136/330 (41%), Positives = 199/330 (60%), Gaps = 17/330 (5%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 + M VLLA +PG+ LW + WG L+ +LLA+ AL EALVL LR++ + L D S Sbjct: 12 RQAMQRVLLATLPGLLVLLWLYAWGPLLNLLLAASGALAMEALVLFLRRRPLQPALSDGS 71 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 AL++ LLA+++PP PWW+ + AV++ KQ+YGG+GQNPFNPAM+GY + L+ FP Sbjct: 72 ALVSATLLALALPPYCPWWLPLSAAASAVLLGKQVYGGVGQNPFNPAMLGYALALLCFPQ 131 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 MT W PH + + + G + D +QAT LD+ + + Sbjct: 132 SMTHWPAPHALDL-LGGLQQVFGLG-------------GNPPPDAWAQATALDSLR--IN 175 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 +V+++ G G G +WVNL +LAGG++LL Q+ I W P+ L +L L ++ Sbjct: 176 KSLTVDELFAGNPAFGHFGGRGTEWVNLGFLAGGLFLLQQRVIGWQAPVGMLGSLLLISL 235 Query: 258 LGWLFSP-ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRS 316 L W S ++ +P HLLSGA+MLGAFFI+T+PV+ + RL+FG GLL +LIR+ Sbjct: 236 LCWNGSGSDSHGSPLFHLLSGASMLGAFFIVTEPVSGPKAAKARLLFGVGVGLLTYLIRT 295 Query: 317 FGGYPDGVAFAVLLANITVPLIDYYTRPRV 346 +GGYPDG+AFAVLL N+ VP ++ + + Sbjct: 296 WGGYPDGLAFAVLLMNLAVPALERLSSEKP 325 >UniRef50_Q315L3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Desulfovibrionales RepID=Q315L3_DESDG Length = 319 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 181/348 (52%), Gaps = 40/348 (11%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + ++P+ H R +M L+A +P +A ++ +G L + L+ V+A++ EA+ L Sbjct: 12 LAVGAAPHWHCGRTIHGMMRDYLIALMPAVAMAVYMYGLDALRVMALSCVTAVVIEAVCL 71 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K ++ V T+ DNSALL GLLLA +P APWW+V+LG+ F +++ + ++GGLG NP Sbjct: 72 KAMERDV--TVDDNSALLQGLLLAFLLPASAPWWLVILGSAFTILLGRLVFGGLGANPVC 129 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 ++G+ +L IS+ ++M +NT+ + Sbjct: 130 APLVGWAILSISWKLEM---------------------------DIDAAMLNTMLVN--- 159 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 PL K V I + +G GA A L GG++LL ++ +RW Sbjct: 160 -----PLTQLKYF--GAQKVADISYTGLLAGQQLGALGSSQVGALLLGGIYLLVRRTVRW 212 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 +P +F + L + + + A+P HLL+G+ + GAFF++TD ++ +I Sbjct: 213 QLPAAFFGGVLLISGIFYAIDSSQYASPLFHLLTGSVVFGAFFLVTDSSSSPVGKAAMVI 272 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 FG LAG +V IR +G YPDGV FA+LLAN+T PL+D RP+ +G R Sbjct: 273 FGLLAGGMVVTIRVYGMYPDGVPFAILLANMTSPLLDM-IRPKPFGAR 319 >UniRef50_A1ZH15 NADH:ubiquinone oxidoreductase, na(+)-translocating, b subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZH15_9SPHI Length = 456 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 149/404 (36%), Gaps = 69/404 (17%) Query: 11 THNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---------------------TLVQILL 49 + R+M+ V++A VP + +W G L +++ Sbjct: 49 VRDAIDMKRLMITVVVAMVPCLLFGIWNTGHQHYLAIGETADLMAKIIYGAKVVLPIVIV 108 Query: 50 ASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIA 109 + L E ++R ++ + L++G+L+ + +P P W V L + FAVIIA Sbjct: 109 SYGVGLGIEFAFAQMRGHAI-----NEGYLVSGMLIPLILPVTIPLWQVALASAFAVIIA 163 Query: 110 KQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWL------PPHEIAVNIPGFIDAIQVIF 163 K+++GG G N N AM L ++P M + P I + G+ A + Sbjct: 164 KEVFGGTGMNILNVAMTARAFLYFAYPTYMAGDIKVWTAGEPTVIEQKLDGYTRATALGL 223 Query: 164 SGHTASGGD---MNTLRLGID-GISQATPLDTFKTSVRAGHSVEQ--------------- 204 + +S N +D + +A K V + + Sbjct: 224 AAEQSSNLAAEIQNAREAYVDKKVKEAETKGEIKDPVAFNQKMYKEADNLPEVKKLKEQI 283 Query: 205 ---------------IMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFL 249 G + G+ + L L GG+ L+ W I +S Sbjct: 284 PSHVTNAFESKKGGIYSLKSFVIGTIPGSIGETSFLMCLIGGIILILTGVGSWKIIVSAF 343 Query: 250 VTLALCAMLGWLFSPETLAA--PQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L +L A HL+ G G F+ TDPVTA+ T G+ +G L Sbjct: 344 GGAYLMGLLFNAIGGNAFMAMPAHYHLVMGGLAFGIVFMATDPVTAAQTEIGKWYYGFLI 403 Query: 308 GLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 G L LIR F YP+G+ VLL N+ PLIDYY R Sbjct: 404 GALTVLIRVFNPAYPEGIMLVVLLMNVFAPLIDYYVVAANKKRR 447 >UniRef50_B0S2D0 Sodium-translocating NADH-quinone reductase subunit B n=2 Tax=Finegoldia magna RepID=B0S2D0_FINM2 Length = 331 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 83/326 (25%), Positives = 150/326 (46%), Gaps = 29/326 (8%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL-KLRKQSVAATLKDN 76 ++M V+ A +P ++F+G L LL + A L E L K+ K+ + Sbjct: 15 QKMMHPVMFALLPIALVAIYFYGLRVLALFLLNIIVACLVEYLANAKIFKRKKIS----E 70 Query: 77 SALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFP 136 +A++T L +++PP P+W+ ++G F + K ++GG +N FNPA++ V + ++FP Sbjct: 71 AAIVTSCLYTMTLPPSIPFWISIVGIAFGIFFGKMVFGGFAKNVFNPALVARVFIYVNFP 130 Query: 137 VQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSV 196 QMT + GG L +D ++Q+TP+ FK Sbjct: 131 QQMTIYWNKAVGGF------------------PGGFGTYLTKSLDSMTQSTPMTAFKVHS 172 Query: 197 RAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCA 256 + G + G + + + G ++L+++K W I ++ + Sbjct: 173 TFE------TIPTMLFGQIPGVIGETCKVLIIIGAIYLIYKKVASWQIMAGSVLGFCALS 226 Query: 257 MLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRS 316 ++ ++ P +L G + G F+ TDPV+A+ T G+ I+G + G++ +IR Sbjct: 227 LVFNAMGVTSVPNPIYGMLMGGFLFGTVFMATDPVSAAKTTVGKWIYGFIIGIVTVIIRG 286 Query: 317 FGGYPDGVAFAVLLANITVPLIDYYT 342 F + GV FAVL+ N P+IDY Sbjct: 287 FALFAGGVMFAVLIGNTFAPIIDYCV 312 >UniRef50_A8ZWA7 NADH:ubiquinone oxidoreductase, subunit B n=4 Tax=Bacteria RepID=A8ZWA7_DESOH Length = 393 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 90/366 (24%), Positives = 144/366 (39%), Gaps = 62/366 (16%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT---------------------LVQ 46 +PY + R M +V+LA +P + ++ G+ L Sbjct: 45 APYVRDSIDLKRFMSMVILALMPPLFFGIYNTGYQASMAAGLSLSLFDVTLRGLRIVLPL 104 Query: 47 ILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAV 106 I+++ E L +RK ++ L+TGLL +++PP P W +G F V Sbjct: 105 IIVSYGVGFFWELLFASIRKHPIS-----EGFLVTGLLFPLTLPPSIPLWQAAVGISFGV 159 Query: 107 IIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGH 166 +I K+++GG G+N FNPA+ G L ++P +M+ Sbjct: 160 VIGKEIFGGTGRNIFNPALTGRAFLFFAYPARMSGDAVWVADLAT--------------- 204 Query: 167 TASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQ-----IMQYPIYSGILAGAGWQ 221 G+D ++ ATPL + VE + ++ G G+ Sbjct: 205 ----------GSGVDAVTGATPLAVAALAQAGESIVETLANTGLPWLTMFLGNYPGSIGG 254 Query: 222 WVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLF-----SPETLAAPQIHLLS 276 L LAG L+ W I + + L L LF P P HL+ Sbjct: 255 TSALCCLAGAALLIVTGIASWRIIIGGVAGLLATGWLLTLFAGPGAHPWFGLNPLYHLIM 314 Query: 277 GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITV 335 G G ++ TDPV+ R ++G L G+L LIR F YP+G+ A+L N+ Sbjct: 315 GGFAFGIVYMATDPVSGPGMENARWVYGFLIGMLTVLIRVFNPAYPEGIMLAILFMNLFA 374 Query: 336 PLIDYY 341 PL+D+ Sbjct: 375 PLLDHV 380 >UniRef50_C6BWF3 NADH:ubiquinone oxidoreductase, subunit B n=2 Tax=Deltaproteobacteria RepID=C6BWF3_DESAD Length = 399 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 92/393 (23%), Positives = 156/393 (39%), Gaps = 86/393 (21%) Query: 6 ASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT---------------------- 43 + SP+ + R+M+ V+ A +P +W G+ Sbjct: 40 SGSPHVRDAIDLKRVMITVVFALIPCFYMAMWNTGYQANAALASMGLEAGTGWRWSVMSG 99 Query: 44 ---------------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTG 82 ++ +++ E L +RK + + L+TG Sbjct: 100 LGLSANPESFGANIMLGALYFFPIYIVCNIAGGFWETLFAVIRKHEI-----NEGFLVTG 154 Query: 83 LLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSW 142 L+ + +PP P W V L T F V+I K+++GG G+N NPA++ L ++P ++ Sbjct: 155 SLIPLIVPPHIPLWQVALATSFGVVIGKEIFGGTGKNILNPALLARAFLFFAYPAHISG- 213 Query: 143 LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSV 202 N++ + +DG S ATPL V Sbjct: 214 -------------------------------NSVWVPVDGFSGATPLA-LAAEGGINAVV 241 Query: 203 EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLF 262 + + + G + G+ + LA L GGV L++ W I +S L A++ Sbjct: 242 AKYSWWDCFIGTIPGSLGETSTLACLIGGVVLVFTGIASWRIMVSLLGGAFAVAIIFNAV 301 Query: 263 S----PETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG 318 S P +P HL+ G G ++ TDPV++S T++G+ +GAL G+++ LIR+ Sbjct: 302 SSGSNPMMTVSPLWHLVMGGLAFGMVYMATDPVSSSMTHKGQFYYGALIGIMIVLIRTVN 361 Query: 319 -GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 YP+GV A+L N+ P ID R Sbjct: 362 PAYPEGVMLAILFGNVCAPFIDNLVMRANIKRR 394 >UniRef50_C6BZS9 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS9_DESAD Length = 323 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 40/350 (11%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 + ++ +P+ ++R ++M LLA VP + FG L + +A +A+LAE L Sbjct: 14 VRLTVSPAPHWRSKRTVEKMMQSHLLALVPALLMAFNMFGLPALATVGIAGTAAVLAEVL 73 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 LK++ + V + + +AL GLL +P APWW+V G V +++ + ++GG G NP Sbjct: 74 CLKMQNRDV--NVDNYTALYEGLLFVFLLPAGAPWWLVASGAVLTIVLGRTVFGGFGSNP 131 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 ++ + +S+P M +N Sbjct: 132 ICAPLVAWAFCRLSWPAAMDIDANLAHFMINA---------------------------- 163 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 PLD K ++EQ ++ G G LA LAGG++L+ + Sbjct: 164 -------PLDQLKFFGL--DTLEQFNYTDLFLGKQLGGLGASQILAVLAGGIFLIATGWV 214 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 R IP +FLV + + A + W+ PE A P HLL+G+ M GAFF+ D ++ + Sbjct: 215 RVFIPAAFLVGVTVTASIFWMIDPEVYANPLFHLLTGSVMFGAFFLAPDVASSPVGMIPQ 274 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++FG +AG +V +IR +G YPDGV FA+++AN+ PL+D RP+ +G + Sbjct: 275 ILFGLIAGTMVIIIRVYGIYPDGVPFAIMVANLLTPLLDR-VRPKPFGGK 323 >UniRef50_A4BWI5 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Polaribacter irgensii 23-P RepID=A4BWI5_9FLAO Length = 420 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 90/383 (23%), Positives = 149/383 (38%), Gaps = 55/383 (14%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------------- 42 + R M +V++A +P + ++ G+ Sbjct: 42 HIKAADDLKRTMNIVIVALIPCLIFGMFNAGYQHYAAIDGSLRTDVLANFFTFDNLWIGI 101 Query: 43 --TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVL 100 L ++++ LL E + ++ V L+TG+L+ + +P P WM+ + Sbjct: 102 IKVLPLVIVSYGVGLLVEFIFAVIKGHEVE-----EGYLVTGMLVPLIVPVDTPLWMLSV 156 Query: 101 GTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ 160 VF VII K+++GG G N NPA+ L ++P +W+ ++ V + Sbjct: 157 AVVFGVIIGKEVFGGTGMNILNPALTIRAFLFFAYP----TWMSGDKVWVYDAVNMSEAD 212 Query: 161 VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGW 220 I + L I G + A L + + E + + G + G+ Sbjct: 213 AISGETMLGYYAKASQDLTIKGTNGAADL----VTTYGDRANELYSTFDKFMGFIPGSVG 268 Query: 221 QWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAP---------- 270 + L G L++ K W I LS V A+ ++ + Sbjct: 269 ETSTFLILIGAAILIFTKIASWRIILSAFVGAAVMGLIFNQVVAADIITESSKFYGLMST 328 Query: 271 --QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFA 327 HL G GA F+ TDPVT S TN+G+ I+G L G + +IR F YP+GV A Sbjct: 329 VWWEHLTIGGLAFGAVFMATDPVTGSQTNKGKWIYGFLIGFISIMIRVFNPAYPEGVFLA 388 Query: 328 VLLANITVPLIDYYTRPRVYGHR 350 +LL N+ P ID+Y R Sbjct: 389 ILLMNVFAPTIDHYVVQGNIKKR 411 >UniRef50_C6BTM1 Electron transport complex, RnfABCDGE type, D subunit n=4 Tax=Desulfovibrio RepID=C6BTM1_DESAD Length = 326 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 166/348 (47%), Gaps = 40/348 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 V ++ P+ H R + ++A +P A +W + + + L+ +A++ E + Sbjct: 9 VLTVSIPPHAHCGRTFKQDAFETIIALLPAAAFAIWHYQMLAVRVLALSCFAAVITETIC 68 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L K+ + A + +ALL GL+ IPP APWW+VV G+ +V + + ++GGLG NP Sbjct: 69 LYFMKREIEA--DNYTALLYGLMFGFLIPPAAPWWLVVAGSFISVFMGRMIFGGLGTNPL 126 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 ++G+ VL +S+P M + + Sbjct: 127 CVPLVGWAVLAVSWPELMDFDMTMLASELT------------------------------ 156 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 PL K ++++ + G G A + GG++LL ++ +R Sbjct: 157 -----YPLSQLKNF--GPETLDEYSIKSLLLGFQLGGTGAAQAGAVMLGGIYLLVRRIVR 209 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPL+F+ +A A + + P A+P+ HL+ G+T+ GAFF+ TD ++ + L Sbjct: 210 PDIPLAFIAGVAATAAIFFFIEPLEYASPEYHLICGSTLFGAFFLATDGPSSPAGHIPML 269 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 ++G + G LV +IR +G YPDGV FA+LLAN+ PLID +P +G Sbjct: 270 VYGFIGGALVVIIRVYGIYPDGVPFAILLANLMTPLIDKL-KPGPFGG 316 >UniRef50_C0BFX7 NADH:ubiquinone oxidoreductase, subunit B n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BFX7_9BACT Length = 386 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 92/366 (25%), Positives = 148/366 (40%), Gaps = 62/366 (16%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFG---------------------WGTLVQIL 48 + + R M+ V++A +P + ++ G W + I+ Sbjct: 47 HIRDAVDLKRTMVTVIIALLPALIYGIYNTGYQYYAQTGVSFTFLEAFMHGAWKIVPMII 106 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E R V + L+TGLL+ + +P P WMV + T FAV+I Sbjct: 107 VSYVVGLSIEFGFAVYRGHEV-----NEGYLVTGLLIPMIMPVDIPLWMVAVSTAFAVLI 161 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 AK+ +GG G N NPA+ ++P M+ A N Sbjct: 162 AKEAFGGTGMNILNPALTARAFAFFAYPTYMSGNKVWVSEASN----------------- 204 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWL 228 +D IS T L T +S+ + ++ G + G+ + L Sbjct: 205 -----------VDAISGETILGTLAAGGEVNYSM-----FEMFQGAIPGSIAETSTLWVA 248 Query: 229 AGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAP--QIHLLSGATMLGAFFI 286 G + L+ W I ++ A+ +L L+ L + HL+ G G F+ Sbjct: 249 VGALILILTGVGSWRIITGGILGAAVMGLLFNLWGANALMSFSWINHLVVGGFAFGIVFM 308 Query: 287 LTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPR 345 TDPV+ + TN+G+ I+G L G+ +IR F YP+GV A+LL N+ P ID+Y Sbjct: 309 ATDPVSGAQTNKGKWIYGILVGIFCIMIRVFNPAYPEGVMLAILLMNVFAPTIDHYVVNG 368 Query: 346 VYGHRK 351 RK Sbjct: 369 NIIKRK 374 >UniRef50_B6WV80 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV80_9DELT Length = 319 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 110/350 (31%), Positives = 173/350 (49%), Gaps = 39/350 (11%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 ++ +++ PY H R R L+ L A +P + +W +G + + L A+L EA Sbjct: 9 VLLAMSAPPYWHCGRTVRRQSLMTLAALLPAVIGAVWTWGLPAVRVMSLCVAVAVLTEAA 68 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 KL + +A + D +A+ +GLLL+ +P APWW+ V+ + A+ + K +GGLG NP Sbjct: 69 CQKLMGRELA--IDDYTAVCSGLLLSFMLPADAPWWIAVMAPLIAISLGKMAFGGLGANP 126 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 N +++G+ VL +SFP+ M P+ + +N +D + Sbjct: 127 VNTSVVGWAVLFVSFPLFM----EPNAVQLNAASMVDPLVR------------------- 163 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 L F + ++ ++ +G+ AG A GG L + I Sbjct: 164 --------LKFFGWADAGRIPLQDLLLGQQINGLGAGQVG-----ALFLGGSLLAARGII 210 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RW I L F +A A L ++ SP T A+P HL +G+ MLG FF++TDP A + Sbjct: 211 RWQIALGFFAGVAGLAALFYMNSPATDASPLFHLCTGSVMLGGFFLITDPANAPSRPLPM 270 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++G L G LV IR +G Y DGV FA+LLAN+ PL+D RP+ +G R Sbjct: 271 FLYGLLGGALVMTIRKYGIYLDGVPFAILLANLVAPLLDS-IRPKPFGVR 319 >UniRef50_A6DRQ1 Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Bacteria RepID=A6DRQ1_9BACT Length = 387 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 146/373 (39%), Gaps = 70/373 (18%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------------- 42 + + R+M+ V+LA VP I ++ G Sbjct: 47 HVRDSIDLKRMMITVVLAMVPCILFGIYNTGLQHYSALLSDGQIEALPGMVDMIVYGAIM 106 Query: 43 TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT 102 + IL ++ + E + +RK + + L+TG+L+A+ +P P W V L T Sbjct: 107 VVPVILTVYITGGIIEGIFACIRKHEI-----NEGFLVTGILIAMVVPASIPLWQVSLAT 161 Query: 103 VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVI 162 F V I K+ +GG G N NPAM L +FP Q++ D + V Sbjct: 162 AFGVFIGKECFGGTGMNILNPAMTARAFLFFNFPSQISG---------------DKVWVG 206 Query: 163 FSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQW 222 F G + ++ ATP+ S ++ G + G+ + Sbjct: 207 FD-------------RGQEVVATATPMGLAAKGDEITWST-----MDMFLGFIPGSIGET 248 Query: 223 VNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETL----AAPQIHLLSGA 278 LA + GG+ LL W L LV L A L L S HL G Sbjct: 249 STLACIIGGIILLITGVASWRTMLGMLVGGFLFAWLISLGSTNPNDIAALGAVKHLCMGG 308 Query: 279 TMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPL 337 G F+ TDPV+++ T+ G+ I+G AG + L R YP+GV AVLL N+ PL Sbjct: 309 FAFGLVFMATDPVSSANTDLGKWIYGFGAGAMSMLFRIINPAYPEGVMLAVLLMNVFAPL 368 Query: 338 IDYYTRPRVYGHR 350 ID+Y R Sbjct: 369 IDHYVVKSSIKRR 381 >UniRef50_Q1K3T0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3T0_DESAC Length = 387 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 75/379 (19%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------------- 42 + + R+M +++LA +P I +W G+ Sbjct: 43 HVRDSINHKRVMSVIMLALLPCIFMAMWNSGYQENLTLNQMLAAGQIDALPGFSDSSSVL 102 Query: 43 ---------TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLA 93 L L+A ++ + + +RK+++ D L+T L+A+ +PP Sbjct: 103 ANVLTGAGMLLPVFLVAIITQAVWVVVFAAMRKKTI-----DAGFLVTAALIALLMPPTV 157 Query: 94 PWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIP 153 P W V + T F V+I ++++GG+G N NPA++ +V L ++ P M+ Sbjct: 158 PLWQVAIATSFGVVIGREVFGGIGMNFLNPALVAWVFLSLAHPTSMSG------------ 205 Query: 154 GFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSG 213 + + +DG + ATPL + A + + I + G Sbjct: 206 --------------------DAVWTAVDGYTGATPLAMALSDGTASLAAQGITWKSAFLG 245 Query: 214 ILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIH 273 + G+ + LA L G LL W I S ++ + + L +F + P H Sbjct: 246 TIPGSMGETSALACLFGAAILLISGIASWRIMASVVLGVIALSSLLCMFDSNAM-NPAWH 304 Query: 274 LLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG-YPDGVAFAVLLAN 332 L+ G G F+ TD +A+ T +G+ I+G L G+LV +R + P+ V +L N Sbjct: 305 LVLGGLAFGTVFLATDHSSAAMTTKGQWIYGILIGVLVVAVRVYNPMMPESVGMIILFGN 364 Query: 333 ITVPLIDYYTRPRVYGHRK 351 + PLID RK Sbjct: 365 VAAPLIDRLIVNAHIKKRK 383 >UniRef50_A6TT06 NQR2 and RnfD family protein n=2 Tax=Bacteria RepID=A6TT06_ALKMQ Length = 320 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 156/341 (45%), Gaps = 29/341 (8%) Query: 11 THNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVA 70 + ++M VL + +P ++F+GW TLV + + SV + E L + + V+ Sbjct: 5 YRSIFMKQKMMRKVLYSLIPVTLGSIYFYGWRTLVLMAVISVFGIFTEYLFKRKSNKKVS 64 Query: 71 ATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVV 130 + L+T +LL +++P P+W+ ++G +F ++ AK+++GG G N FNPA+ Sbjct: 65 EAV-----LVTSILLTLTLPASTPFWVGIIGIIFGIVFAKEIFGGFGHNVFNPALAARTF 119 Query: 131 LLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLD 190 L ++FP MT +Q GG L +D I+Q+TPL Sbjct: 120 LYVTFPEPMT------------------VQWSTVSSGFPGGFARYLSPALDTITQSTPLG 161 Query: 191 TFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLV 250 + E + ++ G +G+ + L +LL+ K W + L+ ++ Sbjct: 162 ILRQGG------EMLPLRNLFIGNTSGSLGEASAFLILVAAAYLLFTKTADWKLMLAPVI 215 Query: 251 TLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLL 310 + L + ++ +P LLSG + F+ TDP+TA + I+G L G++ Sbjct: 216 GFVGIHSILLLANVSSVPSPLHGLLSGGFLFMTVFMTTDPITAPKQTEAKWIYGLLIGII 275 Query: 311 VWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +IR FG + G FAVL+ N P++D + RK Sbjct: 276 ASVIRIFGIFVGGAMFAVLIMNTFSPILDEGIKHLKSSKRK 316 >UniRef50_B0MXK4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXK4_9BACT Length = 368 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 139/364 (38%), Gaps = 59/364 (16%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT---------------LVQIL 48 + + + R M++V++A +P + ++ G+ L I+ Sbjct: 41 TTSRGAHIRDCNDMKRTMIVVVVALMPALLFGMYNTGYQVGMTGWAAFWFGFLKVLPMIV 100 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E + R V + L++GLL+ + +P P WM+ LGT FAVI Sbjct: 101 VSYVVGLGIEFFFAQKRGHEV-----NEGFLVSGLLIPMIMPVGTPLWMIALGTAFAVIF 155 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 K+++GG G N FNPA++ + ++ ++ Sbjct: 156 GKEVFGGTGMNVFNPALVARAFVFFAYTPFISG--------------------------- 188 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWL 228 + D +S AT L+ TS +S + G + G + LA L Sbjct: 189 -----EKVWFADDAVSGATALEQLATSGAMSYSTA-----DAFLGFIPGCVGETSTLAIL 238 Query: 229 AGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILT 288 G LL+ W + T HL+ G GA F+ T Sbjct: 239 IGAAILLFTGVASWRTMSFVFIGGLAMGYFFQALGVTTYP-AWEHLIVGGFAFGAVFMAT 297 Query: 289 DPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVY 347 DPVT++ T G+ I G L G L LIR YP+G+ A+L N PL+DY Sbjct: 298 DPVTSAQTRTGQYIVGFLTGALAVLIRVVNPAYPEGMMLAILFMNALAPLVDYCVVESSI 357 Query: 348 GHRK 351 RK Sbjct: 358 SRRK 361 >UniRef50_Q7MIC8 Na(+)-translocating NADH-quinone reductase subunit B n=288 Tax=Bacteria RepID=NQRB_VIBVY Length = 414 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 87/408 (21%), Positives = 149/408 (36%), Gaps = 96/408 (23%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT------------------- 43 S + + RIM++V A P + ++ G Sbjct: 39 LVTKKSSHVRDSVDLKRIMIMVWFAVFPAMFWGMYNAGGQAIAALNHMYAGDQLAQIIAG 98 Query: 44 -------------------------------LVQILLASVSALLAEALVLKLRKQSVAAT 72 L + E L +RK V Sbjct: 99 NWHYWLTEMLGGTISADASWGSKMLLGATYFLPIYATVFLVGGFWEVLFCMVRKHEV--- 155 Query: 73 LKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLL 132 + +T +L A+ +PP P W LG F V++AK+++GG G+N NPA+ G L Sbjct: 156 --NEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEIFGGTGRNFLNPALAGRAFLF 213 Query: 133 ISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 ++P Q++ + DG S AT L + Sbjct: 214 FAYPAQISGDVVW--------------------------------TAADGFSGATALSQW 241 Query: 193 K----TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 +++ + I + G + G+ + LA L G +++ + W I Sbjct: 242 AQGGNSALVNTVTGAPITWLDAFIGNIPGSIGEVSTLALLIGAAMIVYMRIASWRIIAGV 301 Query: 249 LVTLALCAMLGWLFSPETLAAPQI----HLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 ++ + + + L + +T A + HL+ G G FF+ TDPV+AS TN+G+ +G Sbjct: 302 MIGMIVVSTLFNVIGSDTNAMFSMPWHWHLVLGGFAFGMFFMATDPVSASFTNKGKWWYG 361 Query: 305 ALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 L G + +IR YP+G+ A+L AN+ PL D+ + R+ Sbjct: 362 ILIGAMCVMIRVVNPAYPEGMMLAILFANLFAPLFDHLVVEKNIKRRQ 409 >UniRef50_Q1QX85 Na(+)-translocating NADH-quinone reductase subunit B n=4 Tax=Proteobacteria RepID=NQRB_CHRSD Length = 411 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 93/393 (23%), Positives = 149/393 (37%), Gaps = 85/393 (21%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT--------------------- 43 S+ + + RIM+ V L P + ++ G Sbjct: 41 TKSTAHVRDGIDLKRIMITVWLCTFPAMFFGMYNAGLQANMAIGDGFGALGGWREAVTMA 100 Query: 44 ---------------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTG 82 L L+ E L R V + +T Sbjct: 101 LAGSHDPGSIWANFVLGATYFLPIYLVTFAVGGFWEVLFAVKRGHEV-----NEGFFVTS 155 Query: 83 LLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSW 142 +L A+ +P P W V LG F V+I K+++GG G+N NPA+ G L ++P Q++ Sbjct: 156 VLYALILPATIPLWQVALGITFGVVIGKEIFGGTGKNFLNPALTGRAFLYFAYPAQISG- 214 Query: 143 LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSV 202 +++ + DG + AT L T + + Sbjct: 215 -------------------------------DSVWVAADGYTGATALSTAAQNGMSAVQ- 242 Query: 203 EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLF 262 + + + G + G+ + LA L G LL + W I L V +AL AML Sbjct: 243 QAYSWWDAFLGFIPGSVGETSTLAILIGAAVLLITRIASWRIMLGVFVGMALTAMLFTAI 302 Query: 263 SPETLAAPQI----HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG 318 E+ + HL+ G G F+ TDPV+AS T+ G+L+FG L G++ LIR Sbjct: 303 GSESNPMFGMPWYWHLVLGGFAFGMVFMATDPVSASMTDPGKLLFGFLIGVMTVLIRVVN 362 Query: 319 -GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +P+G+ A+L AN+ P+ID++ R Sbjct: 363 PAFPEGIMLAILFANLFAPMIDHFFVQANIKRR 395 >UniRef50_Q1Q257 Similar to Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q257_9BACT Length = 367 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 34/345 (9%) Query: 6 ASSPYTHNQRQTSRIMLLVLLAAVPG-IAAQLWFFGWGTLV--QILLASVSALLAEALVL 62 + P+ N T + M VL+A G + ++F+G ++ I+ V + + + Sbjct: 52 QTQPFIRNNTDTKKFMGAVLIALTMGWVFPAMYFYGLQCVISKLIVSLVVGVFVVDVIWA 111 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 + ++ + ++ LL+ +PP AP W++ G A+I + + GG+G N N Sbjct: 112 IIAREDHIS----EGGFVSCLLVPAILPPQAPLWLIGFGAAMAIIF-RNILGGVGYNLVN 166 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ + L I FP + + + D++TLR G+D Sbjct: 167 PALFSRLFLTICFPSLLAT--------------------GYQMPFVGIPDLHTLRYGLDT 206 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 I+ ATPL FKT + + G G+ + LA + G+WL+ K W Sbjct: 207 ITHATPLTAFKTDGTI------TSYFSLLIGTANGSLGETCRLALILSGIWLVKMKVANW 260 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 +P+S+ ++ + + + L S E +A P LLSG +LGAF+++TDP+TA+ + + I Sbjct: 261 RLPVSYFGSVFIFSGMFSLLSKENVAPPIFQLLSGGLVLGAFYMITDPITATYNQKAKWI 320 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVY 347 +G G + L+R++ +G +A+LL N+ I Y Sbjct: 321 YGIGCGFITVLLRNYTTLSEGAMYAILLMNLLAIPIQSLMVKIRY 365 >UniRef50_B8J065 NQR2 and RnfD family protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J065_DESDA Length = 320 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 102/351 (29%), Positives = 159/351 (45%), Gaps = 40/351 (11%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 ++ ++ + H R + L +L +P A +W +G L + L+ + ++ EAL Sbjct: 9 VLLAMSVPSFWHCGRTIRKYSLFTILCCLPAAAMAIWNWGLPALRVMSLSVAACVVVEAL 68 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 K + + + D +A+ GL+ A +P APWW+V+LG + + + K +GGLG NP Sbjct: 69 CEKAMGRQIE--VDDFTAVYAGLIFAFLLPADAPWWLVILGAIICITLGKMAFGGLGANP 126 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 + ++G+ VL +SFP+ M D N ++LG Sbjct: 127 VSTPLVGWAVLAVSFPIFM--------------------------------DPNAMQLGT 154 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D I PL K A S + I + G L AGG +L + Sbjct: 155 DFI---DPLVRLKFFGAA--SADSIPLLDLLMGKQISGLGAGQVLGLFAGGSFLCATGTV 209 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RW I L F V +A A + P A+ HL +G+ MLG FF+ T+ T Sbjct: 210 RWQISLGFFVGVAALAAFFHMSDPVHNASAFFHLCTGSVMLGGFFMATEMGTTPLRPLPM 269 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 ++G GLLV +IR +G + DGV FA+LLAN+ P +D RPR +G + Sbjct: 270 FLYGLTGGLLVMVIRKYGVWIDGVPFAILLANMLTPYLDML-RPRPFGGSR 319 >UniRef50_A4CPG2 Na(+)-translocating NADH-quinone reductase subunit B n=20 Tax=Bacteria RepID=A4CPG2_9FLAO Length = 425 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 87/379 (22%), Positives = 148/379 (39%), Gaps = 80/379 (21%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------------- 42 + R M V++A +P + + G+ Sbjct: 47 HVRGADDLKRTMNTVIMALIPVLLFSFFNTGYQHYAAIEAANGAPRELDLFGNFLTWENF 106 Query: 43 ------TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWW 96 + ++++ LL E + ++ V L+TG+L+ + +P P W Sbjct: 107 WLGFTQVIPLVIVSYGVGLLVEFIFAVIKGHEVE-----EGYLVTGMLVPLIVPVDTPLW 161 Query: 97 MVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFI 156 M+ + VF V+I K+++GG G N NPA+ L ++P M+ AV G Sbjct: 162 MLAVAVVFGVVIGKEVFGGTGMNILNPALTIRAFLFFAYPTWMSGDKVWVHEAVERAG-- 219 Query: 157 DAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILA 216 D IS T L + + G+S ++ G + Sbjct: 220 ----------------------TADAISGETILGSLAQNAEHGYSTA-----DMFFGFIP 252 Query: 217 GAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG-------WLFSPETLAA 269 G+ + L GG++L++ + W I LS ++ + ++ W+ + Sbjct: 253 GSVGETSAFLILLGGLFLVFSRIASWRIMLSAVIGALVMGLIFNGVADAGWVTESSRFYS 312 Query: 270 -----PQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDG 323 HL+ G G ++ TDPVT S TNRG+ ++G L G L +IR F YP+G Sbjct: 313 LMSFEFWQHLIVGGLAFGIVYMATDPVTGSQTNRGKWVYGFLIGFLSVMIRVFNPAYPEG 372 Query: 324 VAFAVLLANITVPLIDYYT 342 V A+LL N+ P ID+Y Sbjct: 373 VFLAILLMNVFAPTIDHYV 391 >UniRef50_D2MNQ0 NQR2 and RnfD family protein (Fragment) n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ0_9FIRM Length = 366 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 54/357 (15%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQL--------WFFGWGTLVQILLASV 52 M F +P +R T IM+ V L + +A + W + + ++ Sbjct: 1 MKFLFNPAPNYRTKRSTDSIMMDVGLGLLVVLAYAIIWYGFNNGWNYSLRIGLMAMMTCT 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 +A+L EA+ K+ K+ V +LK + +T L++ + ++ +++ T+ AV+ K + Sbjct: 61 TAILTEAIYFKVMKKDVKNSLKHSYVWITALIITLITRINVSYYALIIATIIAVLFGKLI 120 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGD 172 +GG GQN FNPA +++ SF ++ Sbjct: 121 FGGFGQNIFNPAAFAEAIIMNSFAASVSE------------------------------- 149 Query: 173 MNTLRLGIDGISQATPLDT-------FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNL 225 D ++ ATP+ T ++S ++ G L Sbjct: 150 --------DFMTGATPMATLSSLNWVIRSSAFEAVLQPFNGFVGMFLGNYYSTIGASFAL 201 Query: 226 AWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFF 285 L G +L+++KAI W + ++L + +++ LF + +++L G + GA F Sbjct: 202 VILLVGGYLIYRKAIDWRLTCTYLAAIFCMSLITGLFHGNAIKFAIVNVLGGGVVFGAVF 261 Query: 286 ILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYT 342 +LTDPVT+ + G+ +F A L LIR PDGV F++LL N+ P ID Sbjct: 262 MLTDPVTSPVSPAGKYVFAIGAATLTLLIRWKANLPDGVLFSILLMNMLTPAIDKMV 318 >UniRef50_C8WYR0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYR0_DESRD Length = 315 Score = 217 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 37/347 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 +++ P+ H+ ++M +LLA +P + + ++G+G + +A VSAL+ + L+ Sbjct: 6 LVVSAVPHAHSGNTLQKMMRQILLALIPALLIGVAYYGFGVVQVAAIAVVSALVWQVLLQ 65 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K + V L + + +++ LLLA+ +PP PWW V +GT+ V++ ++YGG G NPFN Sbjct: 66 KAMHKPVC--LANMTTVVSALLLAMIMPPGLPWWAVCVGTLTMVLLGMEIYGGYGNNPFN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 +I +VVL ISFP M+SW P Sbjct: 124 GVLIAWVVLQISFPAAMSSWAYPPGEL--------------------------------- 150 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 ++ TPL + E + G G Q L L GG++LL+++ I W Sbjct: 151 MTINTPLQVLQEDGPF-FVNEFFSFSDLLMGRTVGFAGQTSALFLLLGGLFLLYRRVITW 209 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 HIP+SFL + A L W + E A+P HL++G TM+ AFF+ TD ++ T G L+ Sbjct: 210 HIPVSFLAGVVAFAGLFWAINAEAHASPLFHLVAGGTMISAFFLATDFPSSPVTKTGMLL 269 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 +G AG+L +IR +G +PDG FAV L ++ PL+D PRVYG Sbjct: 270 YGFSAGVLTVVIRIWGQWPDGAFFAVFLMSMLTPLLDK-IAPRVYGR 315 >UniRef50_A5EVI1 Electron transport complex protein, D subunit n=2 Tax=Cardiobacteriaceae RepID=A5EVI1_DICNV Length = 317 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 125/343 (36%), Positives = 176/343 (51%), Gaps = 31/343 (9%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 F P + T+ +M V+LA +P I + F G + ILLA +SA EAL+L Sbjct: 4 FSPRRVPVDYFAPTTAYVMWSVVLALMPAIVVLVIFSGSRWIGLILLAILSAWFFEALIL 63 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 +LR ++V LKD +A LT LLL +S+P P W+V++G FA+I AK LYGG+G NPFN Sbjct: 64 RLRGKAVLPHLKDGTATLTALLLVLSLPVTVPAWLVIIGVGFALIFAKHLYGGMGMNPFN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PAM+G+ LL+SFP M H + ++ D Sbjct: 124 PAMVGFAFLLVSFPAAMGQ------------------------HASLSVPPSSFWQTFDT 159 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + AT LD + S+ I P + LA GG +LL ++ + Sbjct: 160 TTAATLLDYSRQLRIDDASLTAITWLPSWQRFF-------WLLAVALGGCYLLKKRLLDA 212 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 +P++ L++ L A L W + P L SGAT GA+FI TDPVTA+ T GR + Sbjct: 213 RLPIAVLLSALLTATLFWFIDADRYLNPAAQLFSGATFFGAWFIATDPVTAAATPFGRYL 272 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPR 345 +G++ G+L IR+ G +PDG AFAVL AN VP++DY RP Sbjct: 273 YGSIIGVLTVCIRNLGNFPDGFAFAVLCANALVPVLDYVFRPH 315 >UniRef50_D1AFF8 NQR2 and RnfD family protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AFF8_SEBTE Length = 362 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 44/343 (12%) Query: 9 PYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQS 68 PY ++M V+LA P I +G L+ + +S +LAE L + Sbjct: 10 PYIRTNDNVGKVMGDVILALFPCILVTFPAYGIRPLLLCTVCVLSTVLAEWLFSMFFLKK 69 Query: 69 VAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGY 128 ++ D SA++TG+LL+ ++ P P ++ G AVI K GGLG+N FNPA++G Sbjct: 70 -KNSVNDLSAVVTGILLSFTLAPFTPLYIAAFGGAAAVIFGKIAVGGLGRNIFNPALLGR 128 Query: 129 VVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATP 188 + + FP M S + ++ +I+ I+ G S A Sbjct: 129 EFMTVFFPAAMGSGMIWGNESLLKYKYIEIIKSSEPG------------------SWAEY 170 Query: 189 LDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 LD + +GA ++ AGG++L++++ I WHIP S Sbjct: 171 LDRIFFTA-------------------SGAIGEYSIFLLAAGGIYLIYRERITWHIPFSM 211 Query: 249 LVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAG 308 + + L + + I + G +LG ++ TD T++TT ++ +G + G Sbjct: 212 FIVIFLGITVFTFLGFD------IKIALGGLILGGIYMATDMPTSTTTPAAKIYYGCMIG 265 Query: 309 LLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + V L + +++++L+ N+ +D RPRV+G + Sbjct: 266 VSVILCWMSRIEFETLSYSILIMNVFKNPVDSLCRPRVFGTER 308 >UniRef50_B8FN65 NQR2 and RnfD family protein n=3 Tax=Desulfobacteraceae RepID=B8FN65_DESAA Length = 329 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 96/350 (27%), Positives = 160/350 (45%), Gaps = 31/350 (8%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 F ++ +P+ HN + S+ ++LAA+P + + +G L I L +A+ E + Sbjct: 6 KFVVSYAPHCHNGDRISKKSYNMMLAALPAVFFGILQYGIAALSVICLCVSTAMAWELIF 65 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 ++ KQ T+ D +A LTGLLL + +PP+ PWW+++ T ++I K ++GG+G NPF Sbjct: 66 NRIMKQP--PTIGDGNAALTGLLLGMLMPPVVPWWVILTMTFVTILIGKVIWGGMGGNPF 123 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NP ++GY + +S+ M + + I + S G Sbjct: 124 NPVILGYAITRLSWGGFMDVDASLAPGYIFDFNMANPIVAVKSAIWDGAGADAASAFSTK 183 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + G G L + GG++L+ + +R Sbjct: 184 A---------------------------LLLGQHCGTIGTMFGLGLIVGGLYLIIRGYLR 216 Query: 242 WHIPLSFLVTLALCAMLGWLFSPET-LAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W + LS+L + + A L F PE A H+L+G T++ AFF + + + Sbjct: 217 WELCLSYLAGVIVTATLFSAFGPEGKYAGATFHVLAGFTLIAAFFFMAEDSSTPINLIPM 276 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +I+G AG+L LIR+ G Y DGV +A LL N+ PL+D RP+ G Sbjct: 277 VIYGVGAGVLTILIRNIGNYADGVIYAFLLMNVLNPLLDN-IRPKALGKV 325 >UniRef50_A6WSA0 NADH:ubiquinone oxidoreductase, subunit B n=20 Tax=Shewanella RepID=A6WSA0_SHEB8 Length = 416 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 94/395 (23%), Positives = 144/395 (36%), Gaps = 91/395 (23%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT-------------------------- 43 + + R M LV L +P I L+ G Sbjct: 53 HVRDAIDVKRTMTLVGLCLLPAILFGLYNIGLQAQLALAGGLSTPDIWKLEIFNTLFGGL 112 Query: 44 -----------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLA 86 L L A +++L E + ++R Q + +T LL Sbjct: 113 SQDTGILGLFLYGLSFYLPIYLTALLTSLFWEVVFARVRGQEL-----HEGFFVTALLFT 167 Query: 87 VSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPH 146 + +P P W+V +G F V++AK+L+GG+G N NPA+ G + ++P ++ + Sbjct: 168 LILPVSTPLWLVAMGISFGVVVAKELFGGMGYNFLNPALAGLAFIYFAYPSEVAT----- 222 Query: 147 EIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRA------GH 200 + +DG S AT L + Sbjct: 223 ---------------------------IKQLVAVDGFSGATALAQTAAGKLSFADYAWFS 255 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 + + + G GA + LA L GG LL + W I L L+ + A L Sbjct: 256 AFSDPNWWNNFFGFTVGAIGETSTLAILIGGSLLLISRLADWRIVLGVLLGMIATATLCN 315 Query: 261 LFSP---ETLAAPQ-IHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRS 316 + +A P HL++G L F+ TDPVT S T +G+ +GAL G + LIR Sbjct: 316 YIGSSSNDMMAMPWTWHLVTGGFALAMMFMATDPVTTSYTRQGKFAYGALIGFMTVLIRV 375 Query: 317 FGG-YPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 P+GV A+L AN+ PL DY R Sbjct: 376 ANPKMPEGVMLAILFANLWAPLFDYLVARANIKRR 410 >UniRef50_C9N0N0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N0N0_9FUSO Length = 425 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 152/346 (43%), Gaps = 47/346 (13%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +++ +PY + T +M V+++ +P I A +G L+ I+ + SA++ E L Sbjct: 66 KLSFTPYIRTEVDTRSVMKDVIISLIPAIVAASLVYGAKALLVIVTSIFSAVVTEKLFSI 125 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + + D SA++TG+L+A+++ PL +V G A+I K +YGG+G+N NP Sbjct: 126 IFLND-KDSAHDLSAVITGILMALTLAPLTSLPVVAFGASMAIIFGKLMYGGIGKNVLNP 184 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G + + FP M+S I+ Sbjct: 185 AVVGREFMTVFFPAAMSSGTIWFSQEALRLSKINFFVNF--------------------- 223 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 Q TP+ ++ + S G+ + + GG++LL + I WH Sbjct: 224 -QKTPIMSYLDELLLTSS---------------GSLGSYSAFVLILGGLYLLLKNRISWH 267 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 IP++ T + AM+ I + +G +L F+ TD T+ + G++ + Sbjct: 268 IPVTLFATSFIAAMVL---------KDGISVSTGGLLLTGIFMATDMPTSPSFAGGKIYY 318 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G + G+++ L+ G + +++ +L+ N I+ RP V+G+ Sbjct: 319 GIMLGVVIALLSVLGVKNETLSYVLLILNPFTRFINKVFRPVVFGY 364 >UniRef50_A8RDS0 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RDS0_9FIRM Length = 502 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 85/374 (22%), Positives = 150/374 (40%), Gaps = 54/374 (14%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFG--------WGTLVQILLASV 52 M + SP ++ T +IML + +A + L ++ LV + + + Sbjct: 1 MKYIFNVSPNLRQKQSTQKIMLELTIALLIVFGFSLAYYFQAYGMDYVIRALVLMACSVL 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNS-------ALLTGLLLAVSIPPLAPWWMVVLGTVFA 105 +AL+ E K+ V LK +T ++L + P + +++ T Sbjct: 61 TALVTEVAFAFFMKKGVKFDLKYVGKFLNSSFGWITAIILVLMTPISIRPFALIVSTFLC 120 Query: 106 VIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSG 165 ++ K L+GG G N FNPA +G ++ +F ++ I + Sbjct: 121 ILFGKLLFGGFGNNIFNPAAVGRAIIFATF----------MGATTDVVTTATPTTTIATE 170 Query: 166 HTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNL 225 D + + +D I L ++G GA + L Sbjct: 171 FNWLVLDSDLITEMMDAIGGLGTL---------------------FTGWYPGALGETSAL 209 Query: 226 AWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFS--------PETLAAPQIHLLSG 277 L GV L +K I W IP +L ++ + LF P + P +H+L+G Sbjct: 210 LILILGVILAIRKVIDWRIPTIYLGSIFVLTAAIALFRGVGSYGNLPGFIWYPLVHVLTG 269 Query: 278 ATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPL 337 + GA F+LTDPVT+ T+ +G+ IF A ++ LIR P+G +++L+ N+ P+ Sbjct: 270 GVVFGAVFMLTDPVTSPTSAQGKTIFALGAAIITVLIRIKANLPEGCLYSILMMNMLTPM 329 Query: 338 IDYYTRPRVYGHRK 351 I+ + RK Sbjct: 330 IERALDGKQLALRK 343 >UniRef50_A4SQL9 Na(+)-translocating NADH-quinone reductase subunit B n=3 Tax=Proteobacteria RepID=A4SQL9_AERS4 Length = 409 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 86/396 (21%), Positives = 154/396 (38%), Gaps = 92/396 (23%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQI---------------------- 47 + + R+M++V LA P + ++ G + I Sbjct: 46 HVRDAIDLKRMMIMVWLAVFPAMFWGMFNVGNQAIAAIAHLGTVAGADTWQYALAQLLGA 105 Query: 48 ------------------------LLASVSALLAEALVLKLRKQSVAATLKDNSALLTGL 83 L + E L +RK + + +T + Sbjct: 106 SLDPAVAGIGSKMLIGATHFLPIYLTVFLVGGFWEVLFAMVRKHEI-----NEGFFVTSI 160 Query: 84 LLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWL 143 L A+ +PP P W LG F V++AK+++GG G+N NPA+ G L ++P Q++ Sbjct: 161 LFALIVPPALPLWQAALGITFGVVLAKEVFGGTGKNFLNPALAGRAFLFFAYPGQISG-- 218 Query: 144 PPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKT----SVRAG 199 + + + +DG S AT L + ++ G Sbjct: 219 ------------------------------DAVWVAVDGYSGATALSQWAQGGQMALING 248 Query: 200 HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG 259 + + I + G L G+ + L L G +++ + W I ++ + ++L Sbjct: 249 ATGQTISWMDAFLGNLPGSIGEVSTLMILIGAAMIVYMRIASWRIIAGVMIGMVATSLLF 308 Query: 260 WLFSPETLAAPQI----HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIR 315 + +T + HL+ G G F+ TDPV+A+ TN+G+ +GAL G++V LIR Sbjct: 309 NVIGSDTNPMFNMPWHWHLVLGGFAFGMAFMATDPVSAAFTNKGKWWYGALIGVMVVLIR 368 Query: 316 SFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +P+G+ A+L AN+ PL D++ R Sbjct: 369 VVNPAFPEGMMLAILFANLFAPLFDHFVAQANIKRR 404 >UniRef50_B0P6D0 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D0_9FIRM Length = 317 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 32/321 (9%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M V+L + A ++G L+ A + A++A+A LR + A +D S ++ Sbjct: 1 MSDVILLLLVLCALGFLYYGPRALMVCAAAVIPAVIADAACTLLRGR--APNPRDLSPIV 58 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TGL++A+ +P P+++ +VFA+ I K +GG G N FNPA G+ I +P + Sbjct: 59 TGLIIAMMMPASVPYYVPAAASVFAIAIVKHPFGGTGHNLFNPAAAGFSFAAICWPGLVF 118 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 + P + +P F D T L V Sbjct: 119 MYPMPFD---RLPLFGDVT---------------------------TTLYQNPAFVIKLG 148 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 + + G G L A +LL+++ +RW +P+ FL T AL A L Sbjct: 149 GIPSNDITSMLLGNYPGPMGATNILVVAACLGYLLFRRTVRWQLPVPFLATCALIAFLFP 208 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 + + + + L+SGA + GA F +TDPVT+ + ++G AG + L R GGY Sbjct: 209 RVAGDGIQSVIYELMSGAMLFGAVFCITDPVTSPKRDTSLAVYGVFAGAITMLFRYVGGY 268 Query: 321 PDGVAFAVLLANITVPLIDYY 341 + ++FA+LL+N V LID Y Sbjct: 269 EESMSFAILLSNAFVSLIDRY 289 >UniRef50_C1I7V3 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7V3_9CLOT Length = 299 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 155/339 (45%), Gaps = 59/339 (17%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 +I+ +P+ ++IML ++A +P + A ++F+ + I+ V++++AE L Sbjct: 9 LKISPAPHVKKGLGINKIMLDFIIALIPAVFAGVYFYKIDAVKVIVATVVTSIIAEGLWN 68 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K K+ + L D S ++ G++LA+ +P P W+ ++G++FA I+ KQ +GGLGQN N Sbjct: 69 KFVKK--TSFLTDLSPIVLGIILALIMPTYIPLWIPIIGSIFATIVVKQFFGGLGQNFMN 126 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA L+ S+ M + D Sbjct: 127 PAAATKAFLIASWAGVMA------------------------------------KPATDA 150 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 S A +G + + G G+ + LA GG++L+ + I Sbjct: 151 TSAA-----------SGSAEVVVPLIDKIIGQANGSIGEVSILALCIGGLYLVLRGRISL 199 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 P++F+V+ AM+ + + L LL GA + A F+ TD T T G+ I Sbjct: 200 RGPIAFIVS----AMIMYNIFEKDL------LLPGAFFVSAIFMTTDYGTTPMTKIGQYI 249 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 FG +AG+ +I G P+G +A++++N+ PLI+Y+ Sbjct: 250 FGIIAGVCAAIIAVKGFNPEGPYYAIIISNLFTPLIEYF 288 >UniRef50_A7HKQ1 NQR2 and RnfD family protein n=5 Tax=Thermotogaceae RepID=A7HKQ1_FERNB Length = 313 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 41/326 (12%) Query: 20 IMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSAL 79 +M +L A + ++ +G+ + + + + E L K +++ V+ + L Sbjct: 14 MMRKMLWALLFVFIFSVFAYGFKVIWLGIWVFTTGVFVEYLFEKQKRKPVSEAV-----L 68 Query: 80 LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 +T +L +S+PP P+W+ ++G F V K++YGG G+N FNPA++G + + I+FP M Sbjct: 69 VTCMLFLLSLPPNTPFWVAMIGIAFGVAFGKEVYGGFGRNIFNPAIVGRLFIYITFPNYM 128 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAG 199 T + G D +S ATPL + Sbjct: 129 TMGW-----------------------------VKPSLFGTDAVSSATPLALMRQG---- 155 Query: 200 HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG 259 E + + +G AG+ + L LA V+L+ K W + +S + A L Sbjct: 156 ---ESLNVLNLLTGWRAGSIGEGPILIILAAAVYLIVTKTASWRLMISTYFSAAALTFLL 212 Query: 260 WLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG 319 +F+ +LSG+ + + F+ T+P+TA R + I+G + G +IR+F Sbjct: 213 DVFNVPKALPTIPAILSGSLVFISVFMATEPITAPKKIRSQWIYGIIIGTTGVIIRTFSL 272 Query: 320 YPDGVAFAVLLANITVPLIDYYTRPR 345 + +G +FA+L+ N+ PL+D + + Sbjct: 273 FSEGWSFAILMGNLFAPLLDEVIKDK 298 >UniRef50_A1WUZ1 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUZ1_HALHL Length = 314 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 118/323 (36%), Positives = 165/323 (51%), Gaps = 16/323 (4%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M VLLA +PG +W FG G L+ I A + + AEA L+LR + VA L D S L Sbjct: 1 MGWVLLALLPGAGVLVWLFGVGVLLNITAALTAGVAAEAAALRLRGRPVAPALTDGSTPL 60 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 L++ +++PPL P+W+ L AV++ KQ+YGGLGQN FNPAM+GY+ ++++FP ++ Sbjct: 61 AALIIGIALPPLLPFWIPALAGALAVLLGKQVYGGLGQNIFNPAMVGYLAVVLAFPQAVS 120 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 W P +A+ +G D ++ ATPLD T A Sbjct: 121 LWPAPETGVGAAVPATEALHYFLTGALPPIA---------DAMTHATPLDRLATEGFAAL 171 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 + + + + L L + + W +P+ LV A A L Sbjct: 172 PGDGGLWGQTQAAGAWLWLGAALLLGGAGL----LALRIVDWRLPVGVLVGTAATAALLQ 227 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 L A HLLSGAT+L AFFI TDPV+A RLI+ AL G++ +IR GG+ Sbjct: 228 LGDG---APVLFHLLSGATLLVAFFIATDPVSAPREPTARLIYAALIGVVALVIRELGGH 284 Query: 321 PDGVAFAVLLANITVPLIDYYTR 343 PDG AFAVL+ N T PL+DY R Sbjct: 285 PDGFAFAVLMLNATAPLLDYVVR 307 >UniRef50_B0MP93 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP93_9FIRM Length = 438 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 126/324 (38%), Gaps = 34/324 (10%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 I +L + F+G + + ++ +L + + L K+ +KD S Sbjct: 33 RSIYGDQILFMLAITVIATCFYGMRVVTVCACSVLACILTDMVGCFLSKKEYG--VKDLS 90 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 + G+ LA+ +P +++V++G V A+ + K ++GG FNPA + L+I +P Sbjct: 91 TIAYGMALALMLPASVEYYVVIIGAVLAITV-KHIFGGKDNYIFNPAAVAIAFLIICYPT 149 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 Q+ + +DA IF + + + + TPL Sbjct: 150 QVLMYPQ-----------LDAHPEIFGDAGTLVSGIESSFIKNGAMPSLTPL-------- 190 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 I G G L + G+ L+ ++++ + + + + + Sbjct: 191 -----------EILMGRFPGPMGTTHILVLIVSGICLICRRSVSLSATVGGIAVMGVLSY 239 Query: 258 LGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 L P + A +SG + G F+ +DP T TN GR+++G G++ + R+ Sbjct: 240 LTSSVEP-AMDAVIFRFISGFVLFGFIFLASDPQTLPFTNGGRVLYGIALGVITVIFRNS 298 Query: 318 GGYPDGVAFAVLLANITVPLIDYY 341 F++L+ N +D Sbjct: 299 ANIEGIFVFSLLIVNALSLYLDKL 322 >UniRef50_C7NCF4 NQR2 and RnfD family protein n=2 Tax=Leptotrichia RepID=C7NCF4_LEPBD Length = 367 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 47/346 (13%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +I+ +PY + IM V++A P I A +G L+ I ++ +SA+ E + + Sbjct: 12 KISFTPYIRTEVDVRNIMKDVIIALFPAIIASWLVYGIRALLVIAVSVLSAVWTEKIFSR 71 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + +T ++ SA++TG+LLA+++ P +V G A+I K +YG +G+N FNP Sbjct: 72 VFLNDSEST-QNLSAIITGILLALTLAPFTSLPVVAFGASMAIIFGKLMYGRIGKNIFNP 130 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G + + FPV M+S I + Sbjct: 131 AVVGREFMTVFFPVAMSSGAIWFNKEALKMSNIRFFENF--------------------- 169 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 TP + S+ S + A + GG++LL + I WH Sbjct: 170 -SKTPFANYLDSLLLSPSGSLGS---------------YSAFALILGGLYLLLKNRISWH 213 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 IP+S T L M I + G +L F+ TD T+ + G++ + Sbjct: 214 IPVSLFATAFLATM---------FLKDGISVSIGGVLLIGIFMATDMPTSPMSPAGKVYY 264 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G + G ++ L+ G + +++ +L+ N +I+ RP V+G+ Sbjct: 265 GVMLGAVIVLLTMLGIKNETLSYVLLILNPFAKIINKVFRPVVFGY 310 >UniRef50_C0EE37 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE37_9CLOT Length = 328 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 138/328 (42%), Gaps = 31/328 (9%) Query: 15 RQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL-RKQSVAATL 73 + T +L+ + ++F+G ++ + A++++L+ E K+ + Sbjct: 6 QTTKSQRSDMLITLLAVFVLPIYFYGLRVVIMLGFAALTSLVIEFAAQKIFSSKRKQKFA 65 Query: 74 KDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLI 133 D+++L+T ++ + + AP W+V + ++II K +GG G+N FNPA IG + + Sbjct: 66 YDSTSLITAMICTLLLSAAAPHWLVCVAVALSLIIGKYPFGGTGKNIFNPAAIGLSFVGL 125 Query: 134 SFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFK 193 +P S+ PH V++P F D + PL Sbjct: 126 CWPELTFSYPSPH---VSLPLFGDVMV---------------------------PLVNSP 155 Query: 194 TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 V QI G AG V + A GV++L +++I+ +IP + L+T + Sbjct: 156 EYQLGMGGVPQIRAMDALLGQFAGPIGATVAIVLFACGVYMLIRRSIKIYIPAALLITTS 215 Query: 254 LCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWL 313 + ++L +SG + G+ F+ DP T + G++ FG G L Sbjct: 216 VISLLVPRIHTTPSHILMFEFISGVLLFGSVFMANDPSTIPRSRLGQVYFGVFLGFFTML 275 Query: 314 IRSFGGYPDGVAFAVLLANITVPLIDYY 341 + FG +A+L+AN L D Sbjct: 276 FKYFGINEFDFIYALLIANAMSDLCDKL 303 >UniRef50_Q12W78 Electron transport complex protein rnfD n=2 Tax=Methanosarcinaceae RepID=Q12W78_METBU Length = 309 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 94/350 (26%), Positives = 150/350 (42%), Gaps = 67/350 (19%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F I++ P+ +IM +LA +P + ++ FG + + + +A+ EA Sbjct: 1 MTFTISAPPHKKENITFKKIMWAKVLALMPVVLLSVYLFGLPAIGLVAASIFAAIATEAT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 + K Q + T+ D A+L GL++A+ IPP P W+ ++GTVFAV I K +GG+G Sbjct: 61 IQKAFGQKI--TIADGHAVLIGLMVAMIIPPEVPLWIPMIGTVFAVGIGKHAFGGIGSYV 118 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNP + ++ L +++ M P A+ + Sbjct: 119 FNPVLAAWLFLSLAWGSIMAPASYPQTSALFELVLENGA--------------------- 157 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 G++AG ++ LA G L++++ I Sbjct: 158 --------------------------------GVMAGVSPFFILLA----GAVLIFRRYI 181 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W IP++F VT L A L L +++ G + G FI TD T+ TT GR Sbjct: 182 EWRIPVTFFVTTVLLAFL--------LGDSLSYVVLGVVVFGVLFIATDTSTSPTTKNGR 233 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +I+G + G+LV + F Y DG + + LAN LID T P YG Sbjct: 234 VIYGIVCGVLVVVYGHFANYVDGTFYGLFLANCVASLIDNNTLPASYGTE 283 >UniRef50_A4MZD3 Electron transport complex protein RnfD n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD3_HAEIN Length = 221 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 105/216 (48%), Positives = 141/216 (65%), Gaps = 6/216 (2%) Query: 139 MTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRA 198 MT+W+PP + P F DA +IFSG T G ++ L IDGI+QATPLD+ K ++ Sbjct: 1 MTTWIPPINLLQEPPTFSDAFSLIFSGLTTDGFTLSQLTHNIDGITQATPLDSAKIFYKS 60 Query: 199 GHSVE---QIMQYPIYSGILA--GAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 + ++++ PI+ G GW +N+A+LAGG++L+ ++ I W IP++ LVT Sbjct: 61 HTQLNDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRVIHWQIPVAMLVTFF 120 Query: 254 LCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWL 313 C F+ T + L+SGA M GAFFI TDPVTAS T RG++IFGAL GL V+L Sbjct: 121 -CLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYL 179 Query: 314 IRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 IR G YPDGVAFA+LL+NI VPLID+YTRPRV G+ Sbjct: 180 IRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGY 215 >UniRef50_C3X8F5 Electron transport complex n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8F5_OXAFO Length = 337 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 53/331 (16%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M VL A +P FG ++ IL+A SA+ E L +L A+L D SAL+ Sbjct: 1 MADVLFALLPVCFMAWLAFGMEPVMVILVACGSAVATEFLFSRLYVGK-TASLSDGSALV 59 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TG LLA ++ P P ++V G AV+ K L GGLG+N FNPA++G + + FP MT Sbjct: 60 TGTLLACTLAPFTPLYIVAFGGAMAVLFGKLLAGGLGRNRFNPALVGREFMTVFFPAIMT 119 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 S + +D + F Sbjct: 120 SGAIWYRYDAVHVSSLDWLPDTFLDSL--------------------------------- 146 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 I+ G +GA ++ + + GGV+LL + I WHIP++ V+ + ML Sbjct: 147 ---------IFRG--SGAIGEYSVVLLVLGGVYLLLKNRISWHIPVALTVSFTVLFML-- 193 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 L + +LGA F+ TD T+S+T GRL +GA+ G + + +FG Sbjct: 194 ------LPDGEYRFSLAGVLLGAIFMATDMPTSSSTFIGRLYYGAMIGAVAVMCIAFGVK 247 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + +++++LL N V +D+ RPRV+G + Sbjct: 248 HEYMSYSILLLNAFVVPVDWVFRPRVWGGKN 278 >UniRef50_A9NEB1 NADH oxidoreductase complex RnfABCDGE type, D subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB1_ACHLI Length = 356 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 98/351 (27%), Positives = 153/351 (43%), Gaps = 55/351 (15%) Query: 6 ASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLR 65 +SPY + T R+M VL+A P + ++ FG L +IL++ + + EAL Sbjct: 9 QTSPYIRKETSTKRMMFDVLIALTPVVFFSIYRFGLDALARILVSLIIFVGVEALYFLSV 68 Query: 66 KQ-------------SVAATLKDNSA-LLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQ 111 + ++ + SA ++ ++ A+ +P ++VV+G +F I K Sbjct: 69 TRVDGYNFKDKIKNKFKKYSINNFSAPAVSAVIYAMLLPNQLHLYVVVMGALFGAAIGKM 128 Query: 112 LYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGG 171 ++GGLG N FNPA G V + ++F T Sbjct: 129 IFGGLGMNIFNPAAAGRVFIALAFTTFFTGSYG--------------------------- 161 Query: 172 DMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGG 231 ID + AT L T V +S+ + G + G+ + +LA L G Sbjct: 162 -------FIDAAAGATALSTSFPEVLNSYSL-----IDLLVGNIPGSMGEINSLAILFGL 209 Query: 232 VWLLWQKAIRWHIPLSFLVTLALCAMLGWLF--SPETLAAPQIHLLSGATMLGAFFILTD 289 +LL +K+ + LS L+ A + LLSG + G F++TD Sbjct: 210 AYLLIRKSADYRPVLSGLLIFTALATVAGFILHPTLVFEYVIFQLLSGGLLFGLTFMITD 269 Query: 290 PVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDY 340 P T+ T GR FG + G LV+ IRSFG P+GVAFA+L N+ VPL+DY Sbjct: 270 PATSPITRPGRWWFGLIVGSLVFFIRSFGSLPEGVAFALLFGNLMVPLLDY 320 >UniRef50_A8S6D0 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D0_9FIRM Length = 339 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 93/347 (26%), Positives = 141/347 (40%), Gaps = 44/347 (12%) Query: 12 HNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAA 71 ++T R V VP + +F+G L+ +A ++ L + LV LR + Sbjct: 11 RQLQKTGRYYKHVFWLCVPLLCMACYFYGARPLLLCGIALLTGNLCDRLVALLRHR--VY 68 Query: 72 TLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVL 131 T +D S L++A+ +P +++V+ + V+I K+++GG G PFNPA +GY V Sbjct: 69 TNRDFSNESFSLIIALLMPATVDIYVLVVAVLAGVLIGKEVFGGYGSYPFNPAAVGYAVA 128 Query: 132 LISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDT 191 +S+P Q+ + P+ + SGG +N L + Sbjct: 129 AVSWPEQVVRYPQPYTPLPLWNASAVPVSSTIEDTLRSGGILNLNALAV----------- 177 Query: 192 FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 G A L LA G+ L QK + SFL+T Sbjct: 178 -------------------VLGEFAAPMGTGAALVILACGLVLWTQKDVHIGASASFLIT 218 Query: 252 LALCAMLG---------WLFSP--ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 L A LFS L + L +GA + A F+L +P T + GR Sbjct: 219 CGLIAFFFPRQVGLADSTLFSSLLPRLQGIRDELHTGAVLFCAVFLLNEPYTCAHHRLGR 278 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVY 347 +++GAL G R FG Y GV FA+L N LID T R+Y Sbjct: 279 ILYGALVGAATMGFRYFGVYETGVCFALLAVNSVSALIDR-TEERLY 324 >UniRef50_A9NGU6 Na+-transporting NADH:ubiquinone oxidoreductase subunit B n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU6_ACHLI Length = 315 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 49/333 (14%) Query: 24 VLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGL 83 V A + A + FG + LA +++ + E L K RK T S +T L Sbjct: 11 VASALFILLIAASFIFGATVFIVGALAILTSFVVEILSTKARK----ETFDWTSFWITPL 66 Query: 84 LLAVSIPPLA--PWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTS 141 ++ + P WMV + T F V AK ++GG +N FNPAM+G + + ++FP+ + + Sbjct: 67 VITLLTTPTIIDQVWMVSIATAFGVFFAKSIWGGQDKNVFNPAMVGLIFIALAFPIYVNN 126 Query: 142 WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHS 201 +L P + + G Sbjct: 127 FLEPVSGLASPQTLATIFKN-----------------------------------SPGQI 151 Query: 202 VEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWL 261 + + + G AGA L + G+ ++ + W IPL+F+ T + +++ Sbjct: 152 MTTYSLWDVLLGNYAGAIGTTFKLGIIILGLLMMVVRISDWRIPLTFVGTYFVLSLINGF 211 Query: 262 F--SPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG 319 +L G M F+ TDP TA N+G+ I+G G + W+I++ Sbjct: 212 TKTGVNPFMYATYSILMGHLMFAVMFVSTDPQTAPLYNKGKFIYGIGLGFITWIIQNIWV 271 Query: 320 Y------PDGVAFAVLLANITVPLIDYYTRPRV 346 + +G+ ++V N V LID +T P+V Sbjct: 272 FNPLAPNTEGIIYSVTFMNAVVGLIDVWTVPKV 304 >UniRef50_C7NE07 NADH:ubiquinone oxidoreductase subunit RnfD-like protein n=2 Tax=Leptotrichia RepID=C7NE07_LEPBD Length = 345 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 128/340 (37%), Gaps = 53/340 (15%) Query: 12 HNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAA 71 Q ++ + +L++ +P + + ++ ILL+ +A L + + L Q Sbjct: 8 KQQENIAKTNIDILISLIPMLLVAFAAYEVTPVLVILLSIAAAELVDIIFS-LILQKNKE 66 Query: 72 TLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVL 131 TLKD S + G L + P P ++ A + K +YGG+ + FNP + G + + Sbjct: 67 TLKDLSGINIGALTGFVLAPFTPLYVAAFAGAMATLFGKVMYGGIDKKVFNPVIWGKLFV 126 Query: 132 LISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDT 191 L FP + P+ A P Sbjct: 127 LTFFPAVLA----PNSSAWTNPDIFK---------------------------------- 148 Query: 192 FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 E++ + I G + +A + G ++LL++ I WHIP+SF +T Sbjct: 149 --------LPSEEVTGLTSFLVINKGIIGELSIIAMILGAIYLLFRSRITWHIPVSFFIT 200 Query: 252 LALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLV 311 + + + + G + F+LTD T G++ FG LAGL Sbjct: 201 IFFGYYIASNNNINVVTT------LGEIIFMGIFVLTDSFTTPQHGFGKVFFGFLAGLST 254 Query: 312 WLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + G + + ++VL+ N I+ +P V+G K Sbjct: 255 IIFWFLGIQTEAIIYSVLILNPFTRPINTIFKPNVFGDEK 294 >UniRef50_UPI0001698867 electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698867 Length = 194 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 2/136 (1%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 + ++P+ H +IM V+ A +P +W FG L +L ++S LL E L + Sbjct: 8 ELRTTPHAHAADDVVKIMRNVVYALLPITIWSVWQFGLSALALLLTVTLSCLLFERLFNQ 67 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 +R + ++L D SA +TGLLLA+++PP P WM V+ A+ + K L+GGLG N NP Sbjct: 68 MRGEP--SSLGDWSATITGLLLALTLPPGFPLWMGVVAAFAAIALGKALFGGLGMNVLNP 125 Query: 124 AMIGYVVLLISFPVQM 139 A++G + +FPV + Sbjct: 126 ALVGRAFVQAAFPVAI 141 >UniRef50_D1RAM2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAM2_9CHLA Length = 512 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 19/231 (8%) Query: 134 SFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFK 193 ++P + + + N + S + L G G+S D ++ Sbjct: 280 TYPTIQEKFAEWNAHSANQATLGE-----LSQEQMKNFVTSPLTEGGLGLSPGYYEDAYQ 334 Query: 194 TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 S + + G G + LA + G + L++ W ++ + + Sbjct: 335 FSALDHGIGSTNNDWGFFFGNKLGCMGETSTLACILGAILLIYTGVGAWRTMVAMALGMY 394 Query: 254 LCAMLGWLFS-----------PETLAAPQI-HLLSGATMLGAFFILTDPVTASTTNRGRL 301 L A+ S P T P HLL G G F+ TDPV++ + + + Sbjct: 395 LTALFFEFGSSFFAGAQGSWAPATFGFPAYKHLLLGGAAFGIVFMATDPVSSPSLDSAKW 454 Query: 302 IFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+G G++ LIR YP+GV A+L+ N+ PL DYY R Y R+ Sbjct: 455 IYGLFCGIVTMLIRVVNPAYPEGVMLAILMGNVFAPLFDYYAA-RFYRKRR 504 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 90/232 (38%), Gaps = 62/232 (26%) Query: 9 PYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT------------------------- 43 P+ + R ML+V+ A +P I +W G + Sbjct: 44 PHIRDAIDVKRWMLIVVFALIPCILMAIWNTGLQSFVYSSGNYQLMNEFLSSSTSFQGYF 103 Query: 44 --------------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGL 83 L Q L+A L E + +R+ ++ L+TG+ Sbjct: 104 DFALKDNRYLTILKEGLYALLPQALIAYAVGGLWEGIFACVRQHEIS-----EGFLVTGI 158 Query: 84 LLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWL 143 L A+ +PP P+WM +G +I AK+++GG G N NPA+ L ++P +M+ Sbjct: 159 LYALILPPTLPYWMTAVGVSVGIIFAKEVFGGSGMNIVNPALACRAFLFFTYPGRMSG-- 216 Query: 144 PPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTS 195 N+ DA +V + + ++ +DG +QATPL F + Sbjct: 217 -------NVWVGTDATKV---RESLIAMNQDSKASTLDGYTQATPLAKFNVT 258 >UniRef50_Q73MW5 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema denticola RepID=Q73MW5_TREDE Length = 344 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 134/344 (38%), Gaps = 24/344 (6%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + ++P+ + + +I ++VL I L+ I++A + L E L+ Sbjct: 7 LSLTAAPFVYTRLPIFKINIVVLSLLGIQILILALSADLYALLNIVIAVMGVLFVENLLR 66 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 L +L+ +++GLL+ +P + V + + F+V I K ++GG G+N N Sbjct: 67 YLASSKFGLSLE---MIISGLLIGFFMPTGIGFVFVFILSAFSVFIVKTVFGGTGRNWLN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI-- 180 P IS P + + F ++ + + + I Sbjct: 124 PVAFAVCAAYISRPEAFPPLISDFSLLAEKGSFFAVMEANGLLKLKTDFTITSALNSILL 183 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 G+ P + + S+ N+ L + L +A+ Sbjct: 184 HGVGVTLPEGYISLFLNSTSSIPAFRY----------------NIVTLVSSIILFSIRAV 227 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETL---AAPQIHLLSGATMLGAFFILTDPVTASTTN 297 + +P FL T A+ + + + +L+G + AFF++T+P ++ T Sbjct: 228 DYILPAFFLATYAVLVWIFGMAPVSNIYFTGDILSAVLTGGILFAAFFVMTEPASSPKTK 287 Query: 298 RGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 G+ + G G+ + I + G P G+ FA++L NI PLI+ Sbjct: 288 YGKAMIGFFTGVFAFFICAHGASPAGIFFAIILGNIISPLIERL 331 >UniRef50_D1PJN0 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN0_9FIRM Length = 339 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 127/333 (38%), Gaps = 51/333 (15%) Query: 22 LLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLT 81 +L AVP +++G ++ +L + A L + + L + + + S+ Sbjct: 17 RDLLWCAVPLTGMAWYYYGPRPVLLMLTGLLVAYLCDCALAPLHGEGYHSH--EPSSECF 74 Query: 82 GLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTS 141 L+ + +P P+ VV+ V A ++ K+ +GG G PF+PA +G V IS+P + Sbjct: 75 AALIVLMMPATVPY-AVVVAAVIAAVLVKEAFGGEGHYPFHPAAVGMAVAGISWPDSVYR 133 Query: 142 WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHS 201 + P +P F + + G + Sbjct: 134 YPTPGT---WLPVFGASDGTLVEGM---------------------------NATLRNGG 163 Query: 202 VEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWL 261 + + +G ++G L +A G++LL + IR + + FL+ C L WL Sbjct: 164 LPSASTMNLLTGNVSGGLGITAALVVMACGLFLLVRGHIRLSVLIPFLI---FCIGLPWL 220 Query: 262 FS----------PETLAAPQIHL-----LSGATMLGAFFILTDPVTASTTNRGRLIFGAL 306 P +I+L LSG + G F++ +PVT R+++G Sbjct: 221 LPQLSELPVFSWPWEYVRQRIYLEKYVILSGTVLFGGLFLICEPVTMPNRTSSRIVYGTA 280 Query: 307 AGLLVWLIRSFGGYPDGVAFAVLLANITVPLID 339 G+ R F Y FA+L+ +D Sbjct: 281 LGIATHAFRVFSPYESAACFALLIVGAIPEWLD 313 >UniRef50_UPI00017427D7 electron transport complex protein RnfC n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427D7 Length = 501 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 +PY + + IM V+++ P I A +G L+ I + +SA++ E L K Sbjct: 386 TPYIRTEIEVRNIMKDVIISLFPAIIASALVYGTRALLLIAFSVLSAVVTEKLFSKYFLN 445 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 ++ D SA++TG+LLA+++ PL P +V+ G AVI K +YGG+G+ Sbjct: 446 D-NNSVHDLSAVITGILLAMTLAPLTPLPIVIFGACMAVIFGKLIYGGIGKTFL 498 >UniRef50_C8PP64 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PP64_9SPIO Length = 340 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 72/352 (20%), Positives = 135/352 (38%), Gaps = 23/352 (6%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 ++ +PY + +LVL + A + ++ I+ + ++ LA LV Sbjct: 7 TLSPAPYIYTGLNARHTAILVLSLLSLQLIAMGIMHDFASIFLIISSGAASTLAAFLVGY 66 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 ++ + + D AL+TGLL+ +P + + L + + ++GG G + NP Sbjct: 67 IQGKKI----FDIHALITGLLIGFFLPVNSGFVFSFLIAFMSYFFSWGIFGGKGFSWVNP 122 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 M+ + + P + I +F+ +SG + + Sbjct: 123 VMLAACIASVCKPEYFVQPVGFDRIVSG--------GSVFAAMESSGLLQTPADQYVTSM 174 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 +T L + ++ G+ ++ + NL L + LL K I Sbjct: 175 FNSTFLHSVGVTLPEGY-------ISLFLHHPSAIPAFRYNLLTLGASIILLSAKTIHKT 227 Query: 244 IPLSFLVTLALCAMLGWLFSPETL---AAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 +P +FL+ L L +L+ + AFF++ D + + GR Sbjct: 228 LPFTFLIVYGLLVYLFPSAGQANALGRGDVLSAILTSGALFSAFFVMNDGGSTPRSWEGR 287 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 + G L G+ + I G P G+ FAVLLA+ PLI+ + Y R+G Sbjct: 288 CLTGILTGIFAFCITGPGAIPAGIPFAVLLADCINPLIE-WLESSFYKRRRG 338 >UniRef50_UPI0001C372ED NADH:ubiquinone oxidoreductase, RnfD subunit-like protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372ED Length = 318 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 117/320 (36%), Gaps = 37/320 (11%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 I L ++ +++G LV ++ ++AL AE + L+L + + A D S Sbjct: 5 RYIWLDKMITLATLALMAFFYYGTHFLVTAVICVLTALAAEFVSLRLMHKKIDA--DDLS 62 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 L++A+ +P + + L +F ++AK ++GG F+PA Y+ +L S+ Sbjct: 63 CTSDALIIALMMPASINYLIAALAVIFGTVVAKDVFGGRQNMVFSPAAAAYIFVLTSWGR 122 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 + + PH +D + +G Sbjct: 123 DLLMYPAPHVHTGIAGKAVDLVNSASHTFNMTGK-------------------------- 156 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 + I G +G L V L+++K I + ++ A A Sbjct: 157 -----MDYTDFEILMGNFSGPCGAVSILLLTVAAVMLIFRKDISFGAFFGTIIGTAAFAY 211 Query: 258 LGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 + + + + + + L++ + A FI++D A +G G+ +++ Sbjct: 212 ITPMIN-DRTDSVKYSLVTNMVLFAAVFIVSDLRIAPRKWYFAFFYGLFIGIFSYILVLT 270 Query: 318 GGYPDGVAFAVLLANITVPL 337 + V V+++ + PL Sbjct: 271 TAKENAV---VIMSVLFTPL 287 >UniRef50_Q3KM84 Na(+)-translocating NADH-quinone reductase subunit B n=14 Tax=Chlamydiales RepID=NQRB_CHLTA Length = 503 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 81/214 (37%), Gaps = 49/214 (22%) Query: 6 ASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLV-------------------- 45 +S P+ + R M+LV++A +P I A +W G LV Sbjct: 40 SSPPFVRDAVDVKRWMMLVVIALMPTIFAAVWNSGLQALVYQSSDPRIMEAFLHISGFKS 99 Query: 46 ------------------------QILLASVSALLAEALVLKLRKQSVAATLKDNSALLT 81 + ++ E L +RK +A L L+T Sbjct: 100 YFSFVSQEIGIGSVLFAGCKIFLPLLFISYAVGGTCEVLFAIIRKHKIAEGL-----LVT 154 Query: 82 GLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTS 141 G+L + +PP P+WM LG F V++ K+L+GG G N NPA+ G L +FP +M+ Sbjct: 155 GMLYPLILPPTIPYWMAALGIAFGVVMGKELFGGTGMNILNPALTGRAFLFFTFPAKMSG 214 Query: 142 WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNT 175 + I + + + G +T Sbjct: 215 DVWVGSNPSRIKESLATMSSLAEKSHFDGFSQST 248 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 14/165 (8%) Query: 200 HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG 259 + + + ++ G + G+ + +A L G LL W LSF ++ A Sbjct: 339 YGIGKFSTGNLFFGNILGSLGETSTVACLLGAGLLLLTGIASWRTMLSFGLSAFFFAWFF 398 Query: 260 WLFS-----------PETLAAPQI-HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 + S P P HL G G F+ TDPV++ + ++GA Sbjct: 399 KIMSILTTGNAGAWAPAKFFIPAYRHLCIGGLAFGLVFMATDPVSSPAMKLAKWLYGAFI 458 Query: 308 GLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G L LIR YP+GV A+LL N+ PL D + Y R+ Sbjct: 459 GFLTILIRLINPAYPEGVMLAILLGNVFAPLFDN-IALKQYRQRR 502 >UniRef50_UPI0001698C61 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698C61 Length = 105 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 41/74 (55%) Query: 206 MQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPE 265 + G G GW+WV ++ GG+WL++++ I WHIPLS L A+L +LF PE Sbjct: 5 IMQNPLWGDFGGQGWEWVGNWFIMGGLWLIYKRVISWHIPLSLFAGLFSLALLFYLFDPE 64 Query: 266 TLAAPQIHLLSGAT 279 + P H+ SG Sbjct: 65 SHPFPLFHIFSGGV 78 >UniRef50_UPI00016996B3 hypothetical protein Epers_17019 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016996B3 Length = 89 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 39/75 (52%), Positives = 52/75 (69%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 ML V+LA +PGI A + FFGWG L+ ++A SALL EAL L+LRK+ V L D SA++ Sbjct: 1 MLQVVLALLPGILAMVIFFGWGVLINSVIAIASALLFEALALRLRKRPVTPALMDLSAVV 60 Query: 81 TGLLLAVSIPPLAPW 95 T +L A++ PPL P Sbjct: 61 TAMLFAIAAPPLLPL 75 >UniRef50_B5RQQ1 Uncharacterized conserved protein n=24 Tax=Borrelia RepID=B5RQQ1_BORRA Length = 771 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 112/308 (36%), Gaps = 29/308 (9%) Query: 11 THNQRQTSRIMLLVLLAAVPGIAAQLWF---FGWGTLVQILLASVSALLAEALVLKLRKQ 67 + + I L+ +LA +P + F +++ I+ + S + + L+ + Sbjct: 413 IYTENNLKDIYLITILALIPNLIFSFANNIKFLIDSIILIITSLCS-----YIPIMLKSK 467 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 + +AL+T ++L ++ P + +F + + L + NP +I Sbjct: 468 YRYFSFFIYTALITNIILPLNFPITLK-----IMAIFFTFLMFFYFSRLSKLLINPILIS 522 Query: 128 YVVLLISFPVQM--TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDM--NTLRLGIDGI 183 ++ LL++FP+ T + + IP + I + H ID I Sbjct: 523 FIFLLLNFPLSFKQTYYKELVKQNDIIPTWNKIISKNTNIHNLEKLKEFKRHENKYIDII 582 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQ--WVNLAWLAGGVWLLWQKAIR 241 K S IM + L G + + G ++L + I Sbjct: 583 D--------KFINEQVLSHLNIMIPRFHIENLLGFQNEKYLSPILIYIGFSFILKKFIIN 634 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQI--HLLSGATMLGAFFILTDPVTASTTNRG 299 IPLSF ++L A + S + I ++S M+ F + T+ TA Sbjct: 635 KLIPLSFYISLLFIAYILQNLSLYNYISFDILSLIMSPIPMILVFTMGTELQTAPHFKFE 694 Query: 300 RLIFGALA 307 ++++G Sbjct: 695 QILYGFAL 702 >UniRef50_A9D761 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D761_9RHIZ Length = 272 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 10/144 (6%) Query: 211 YSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAP 270 + G+ Q + L + G + LL + W + L+T L +L L+ + Sbjct: 132 FPGVQLSGAGQGLGLTVIPGALVLLVGGLVSWRV----LLTAGLVVILPGLWDGGLSGSW 187 Query: 271 QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF---GGYPDGVAFA 327 Q G F++ DPV ++TN GR +G LAG L+ L + G P + FA Sbjct: 188 Q---TCAGIAFGLVFLVGDPVVTASTNPGRWAYGILAGGLIVLFDTISGPGVSPTAIVFA 244 Query: 328 VLLANITVPLIDYYTRPRVYGHRK 351 LLA+I PLIDY HR+ Sbjct: 245 ALLASIFAPLIDYLVVEWNVRHRR 268 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 5/113 (4%) Query: 25 LLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLL 84 L+A VP +A + G G L ++ A + +L E LR ++ + L+ Sbjct: 27 LIALVPPVAVTVLERGAGQLAVLIAALIVSLGWELAFALLRGRAPS-----WHGASVALI 81 Query: 85 LAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 AV P A W V L F V+ + ++GG G + A + SFP Sbjct: 82 FAVMAPADAALWQVALAVSFGVVFGELVFGGRGYGFLSAAAAALGFFVFSFPG 134 >UniRef50_Q8YVI1 Alr1997 protein n=17 Tax=Cyanobacteria RepID=Q8YVI1_ANASP Length = 300 Score = 64.2 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 3/117 (2%) Query: 221 QWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATM 280 +W G ++ Q+ RW +FL + +L + L+ T L+SG+ + Sbjct: 152 EWWYGLLFVGAGGMILQRIGRWDTTAAFLGSYSLLEAMRNLWLGWTWDVYWHRLMSGSLL 211 Query: 281 LGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPL 337 L A F++TDP + GR+++ + +++R++ P V F VL A PL Sbjct: 212 LFALFMITDPRSIPNARIGRIVWAFSIAIFTFILRNYFFVPTAV-FWVLFA--FAPL 265 >UniRef50_B2S298 Hypothetical integral membrane protein n=2 Tax=Treponema pallidum RepID=B2S298_TREPS Length = 339 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 116/341 (34%), Gaps = 39/341 (11%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 +P+ + + VLLA + + + ++++ L+ ALV LR Sbjct: 9 APFLYTGLSAGQ-NNSVLLALLVAHVFVVAAMRDTVALFSIVSTELGALSAALVQTLRTP 67 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 V + +L+ GLL+ +P + AV + L+GG N NP + Sbjct: 68 HVPLS----DSLVLGLLIGAVLPAHNSFLNTFCVAFCAVFFTRVLFGGKIGNWLNPIALA 123 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 V+L + + + + A NT Sbjct: 124 PVLLRLCTEGTSLPTSGRVSVVQGAMSYPLFYSALVEWDAAVRTWCNT------------ 171 Query: 188 PLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLW--QKAIRWHIP 245 + G ++ + A G+++ L LA ++ I Sbjct: 172 -----QVFQPLGLTLPEGALSACVFTQAAAPGFRYPVLTLLAALCVYAVRARRYIC---S 223 Query: 246 LSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGA 305 +FLV + L P TL + L+ + AFF+L +P T+ TN G I G Sbjct: 224 CAFLVVYSTLFFLPAHAHPATLVS----LIKSGALFTAFFVLPEPDTSMRTNGGAWISGG 279 Query: 306 LAGLLVWLI--------RSFGGYPDGVAFAVLLANITVPLI 338 L + + + +G + + A+LL NI PLI Sbjct: 280 LCAMCAFFLAKKNSSAPDMWGAHDMHLWSAILLTNIVQPLI 320 >UniRef50_A9DQU2 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DQU2_9RHOB Length = 268 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 5/135 (3%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 P+ +R+ L+ LLA + + A + G+ L + LA V A L KLRK Sbjct: 4 PPPFLSRPWDGNRLTLVTLLAILAPLTASIVAHGFARLAALALALVLAALWHLAFAKLRK 63 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + + ++T ++ +P W + F +++ + ++GG G+ +PA + Sbjct: 64 RP-----PEWGGIVTAMIFVTLVPATVLLWQQGVALSFGLVMGELIFGGRGRGFLSPAAV 118 Query: 127 GYVVLLISFPVQMTS 141 LL SFPV Sbjct: 119 SLAFLLFSFPVDAAQ 133 Score = 42.2 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Query: 232 VWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPV 291 V L+ + W + + F V +A CA S + S +LG F++ DPV Sbjct: 148 VLLVIAGILSWRLVIGFSVAVAACA------SQWPVPTIWPSWPSATLILGLVFLIGDPV 201 Query: 292 TASTTNRGRLIFGA 305 A+ TN GR ++G Sbjct: 202 AAACTNAGRWLYGF 215 >UniRef50_A7BVL8 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVL8_9GAMM Length = 267 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 5/139 (3%) Query: 216 AGAGWQWVNLAWLA---GGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI 272 G L +L GG+ L + F T L W P T+ P Sbjct: 131 PGQWGSTAFLGFLIACLGGLVLNRAARSDVTLAFLFFYTAILFGRALWFGDPLTI--PLH 188 Query: 273 HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLAN 332 L +GA +L AFF+++DP T + GR++ L + + + +GV +++ L Sbjct: 189 QLENGALLLFAFFMISDPKTTPDSRAGRILLAFLVAVGAGFVHFWLYRTNGVFWSLALFA 248 Query: 333 ITVPLIDYYTRPRVYGHRK 351 + VPLID+ Y ++ Sbjct: 249 LFVPLIDWLLPGNRYQWKR 267 >UniRef50_C0B3W9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B3W9_9ENTR Length = 67 Score = 54.6 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 26/47 (55%), Positives = 37/47 (78%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 ML V LAA+PGI +Q++FFG GT+ QI+LA + AL+ E L +KL+K+ Sbjct: 1 MLWVTLAALPGILSQIYFFGLGTIYQIVLAIIVALVTETLCVKLKKR 47 >UniRef50_UPI0001699E71 hypothetical protein Epers_14217 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699E71 Length = 111 Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 18/117 (15%) Query: 135 FPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKT 194 FP+ MT+W P + F +S ++ D ++ A+PL K Sbjct: 1 FPIAMTTWYPAQG------------REHFFDLYSSTFAAPLMQGTWDSLTTASPLGMMKF 48 Query: 195 SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 ++ + ++ G AG+ + L + GG+WL W++ + W IP+S VT Sbjct: 49 EHQSSE------FWSLFIGNTAGSLGETSGLLLMLGGLWLWWRRDLDWRIPVSIFVT 99 >UniRef50_C4GIQ6 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIQ6_9NEIS Length = 899 Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 4/132 (3%) Query: 32 IAAQLWFFGW-GTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIP 90 +A + F+G+ + QI V+++L + + + ++ L SA +TG L++ Sbjct: 24 LAFGILFWGFNRSPWQIAAIVVTSVLTDLTLHTILRR--TTPLFPLSAAITGTSLSMLTN 81 Query: 91 PLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAV 150 W +L FA+ +K L+ G++ +NP++ G V L +T Sbjct: 82 FAHGIWFALLPPFFAIA-SKYLFTVNGKHIYNPSLFGIVAALFFGGGMITPSPAYQWGGS 140 Query: 151 NIPGFIDAIQVI 162 + F A I Sbjct: 141 GVVAFFVATAAI 152 >UniRef50_A4AIL5 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIL5_9ACTN Length = 502 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 9/200 (4%) Query: 20 IMLLVLLAAVPGIAAQLWFFGWGTL----VQILLASVSALLAEALVLKLRKQSVAATLKD 75 + LV ++ + A + + + +L + A+ L + + V Sbjct: 14 MYKLVWISLMIVAVAAIALSFFDLVSPDPFALLASLPVAVGFSYLASMIGARIVRQRAHL 73 Query: 76 NSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIA---KQLYGGLGQNPFNPAMIGYVVLL 132 S+L+TGLL+ + P M +LG A IA K L G++ FNPA +G + Sbjct: 74 ESSLITGLLVFFIMAPSLEL-MGLLGIALASTIAGASKFLIAFRGRHIFNPAALG-AYVF 131 Query: 133 ISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 I P+ +W + + + + + G + I TF Sbjct: 132 IFAPLGFPTWWVGTPLLQPLIVIAAFLILYRTRRLDLGLVFIVVASSIRIALSLASGGTF 191 Query: 193 KTSVRAGHSVEQIMQYPIYS 212 ++ + Q++ + + Sbjct: 192 TDALSFTFASSQLIFFVGFM 211 >UniRef50_Q988S3 Mll6619 protein n=1 Tax=Mesorhizobium loti RepID=Q988S3_RHILO Length = 503 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%) Query: 234 LLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGA-TMLGAFFILTDPVT 292 L+ +K R ++ +F+ + A + P L + + AF +LT+P+T Sbjct: 161 LIVRKLRRLYLVSTFV--VVALATILATTDPSQYWTALAETLGSSPLLFFAFVMLTEPLT 218 Query: 293 ASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITV 335 A T R+ F A+ G L G + A+L N+ Sbjct: 219 APTMRWPRIAFAAIVGFLFAPNIHIGSFYFTPELALLAGNLFA 261 >UniRef50_A5EU44 Putative uncharacterized protein n=2 Tax=Bradyrhizobium RepID=A5EU44_BRASB Length = 274 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 1/155 (0%) Query: 197 RAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAG-GVWLLWQKAIRWHIPLSFLVTLALC 255 AG ++ ++ I G + A LAG L+ + R I + F + A Sbjct: 111 PAGFAIVVLLFTTRGVWISPGQWGAEIWFATLAGLFAILVLSASHRVDIAIYFFASHAAL 170 Query: 256 AMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIR 315 +L + + +A P L SG+ ++ FF+++DP T + GRL+F + + Sbjct: 171 LLLRAAWLGDPIAIPLHQLQSGSLLIFTFFMISDPRTTPDSRVGRLLFAVTVAVAAHYLA 230 Query: 316 SFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 + A++ + ++D + R Sbjct: 231 FVLQMRPALYVALIALSPLTHVLDRLVPAARFSWR 265 >UniRef50_Q1CWI3 FG-GAP repeat protein n=2 Tax=Myxococcales RepID=Q1CWI3_MYXXD Length = 955 Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%) Query: 227 WLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAA---PQIHLLSGATMLGA 283 L + L + + R + +SFL AL L L L + + + Sbjct: 171 ILMAALVLFFFRVGRGWLVVSFLFFYALQTALRAYVLRHHLPPEVLFLGTLGAPSFFIFV 230 Query: 284 FFILTDPVTASTTNRGRLIFGALA 307 F++LTDP T+ T RG+++ Sbjct: 231 FYMLTDPATSPGTRRGQILLALAV 254 >UniRef50_D0L5Q6 Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L5Q6_GORB4 Length = 405 Score = 43.0 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 228 LAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFIL 287 + G V ++ + + +++ V ++GWL E ++ + S A +L Sbjct: 49 VIGAVLVIVIRDAT--VVIAYFVGA--LGVIGWLQLTEGNQDLELWVTSSPMFFVAAIML 104 Query: 288 TDPVTASTTNRGRLIFGALAGLLVWL 313 +P+T+ T R+++G L G L + Sbjct: 105 PEPLTSPATRIPRILYGVLVGALTYC 130 >UniRef50_Q84HM4 UnbU n=2 Tax=Actinomycetales RepID=Q84HM4_NOCAE Length = 336 Score = 43.0 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 3/119 (2%) Query: 211 YSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAP 270 ++ +G + + LA G L + + + L ++ L A+L F+ ++ + Sbjct: 168 FTEWTSGVVDALIPVLLLAAGTMLNAKLTKKIPLILGWVGGFVLQAVLRSAFTDLSIVSA 227 Query: 271 QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL-AGLLVWLIRSFGGYPDGVAFAV 328 + + A +L +++TDP T+ + R +++FG A L++ + G+ FA+ Sbjct: 228 VLPITGTAFILFTNYMITDPSTSPSKPRNQVLFGLATAAAYAVLVQLHVVF--GLFFAL 284 >UniRef50_A6VEU6 Membrane protein, putative n=62 Tax=Bacteria RepID=A6VEU6_PSEA7 Length = 582 Score = 40.7 bits (94), Expect = 0.077, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 86/263 (32%), Gaps = 27/263 (10%) Query: 25 LLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLL 84 LL + +A +W G + +L A L L + ++ +A +T L+ Sbjct: 4 LLDLLSAVALLVW--GTHIVRSGILRVYGADLRRILSRSVERRPLAFAAGIG---VTALV 58 Query: 85 -----LAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 A+ ++ L A+++ + A++ V+ L Sbjct: 59 QSSNATALLATSFVAQGLMALAPALAIMLGADV---------GTALMARVLTLD------ 103 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG-ISQATPLDTFKTSVRA 198 SWL P I + F+ Q + + L + ++ A P+ K Sbjct: 104 LSWLSPLLIFFGVIFFLSRKQTRLGQLGRVFIGLGLIILALQLIVAAAEPMTQAKGVKVL 163 Query: 199 GHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAML 258 S+ + +G L + +LA + L K I + L +V L + + Sbjct: 164 FSSLTGDIMLDALTGALFAMI-SYSSLAAVLLTATLAASKVISLKVALCLVVGANLGSGI 222 Query: 259 GWLFSPETLAAPQIHLLSGATML 281 + S A + G+ + Sbjct: 223 LAMLSATAQNAAGRRVALGSLLF 245 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q15RL2 Electron transport complex protein rnfD n=81 Tax... 346 9e-94 UniRef50_Q482U6 Electron transport complex protein rnfD n=103 Ta... 334 4e-90 UniRef50_A0L5G5 Electron transport complex, RnfABCDGE type, D su... 321 2e-86 UniRef50_Q31GU5 NADH oxidoreductase, RnfABCDGE type, D subunit n... 321 3e-86 UniRef50_Q4QJQ5 Electron transport complex protein rnfD n=74 Tax... 320 4e-86 UniRef50_Q3A7W9 NADH:ubiquinone oxidoreductase, RnfD subunit-lik... 319 1e-85 UniRef50_D0L1N4 Electron transport complex, RnfABCDGE type, D su... 317 4e-85 UniRef50_B0K145 Electron transport complex, RnfABCDGE type, D su... 314 3e-84 UniRef50_C7RDT6 Electron transport complex, RnfABCDGE type, D su... 312 1e-83 UniRef50_A6LW78 Electron transport complex, RnfABCDGE type, D su... 312 1e-83 UniRef50_D1N842 Electron transport complex, RnfABCDGE type, D su... 311 3e-83 UniRef50_Q5LC49 Electron transport complex protein RnfD n=42 Tax... 309 8e-83 UniRef50_C0WAW4 Putative uncharacterized protein n=1 Tax=Acidami... 308 2e-82 UniRef50_B0VFN9 Electron transport complex protein rnfD n=1 Tax=... 307 3e-82 UniRef50_UPI0001BC5C0E Na(+)-translocating NADH-quinone reductas... 307 3e-82 UniRef50_C1SKX3 Electron transport complex, RnfABCDGE type, D su... 307 3e-82 UniRef50_B9ZJX0 Electron transport complex, RnfABCDGE type, D su... 306 7e-82 UniRef50_B5JR41 Electron transport complex, RnfABCDGE type, D su... 306 7e-82 UniRef50_B8CY14 Electron transport complex, RnfABCDGE type, D su... 304 3e-81 UniRef50_B3PB33 Electron transport complex protein rnfD n=91 Tax... 300 5e-80 UniRef50_C4L9H7 Electron transport complex, RnfABCDGE type, D su... 299 1e-79 UniRef50_A9KRW8 Electron transport complex, RnfABCDGE type, D su... 299 1e-79 UniRef50_Q0TQI7 Electron transport complex, RnfABCDGE type, D su... 299 1e-79 UniRef50_A9BJD1 Electron transport complex, RnfABCDGE type, D su... 298 2e-79 UniRef50_Q1Q5X4 Conserved hypothetical electron transport protei... 298 2e-79 UniRef50_B3EJT7 Electron transport complex, RnfABCDGE type, D su... 298 2e-79 UniRef50_B8D8R7 Electron transport complex protein rnfD n=4 Tax=... 298 2e-79 UniRef50_B0PD31 Putative uncharacterized protein n=3 Tax=Clostri... 296 9e-79 UniRef50_Q3B3R3 Electron transport complex, RnfABCDGE type, D su... 295 2e-78 UniRef50_Q89AW7 Electron transport complex protein rnfD n=1 Tax=... 294 3e-78 UniRef50_Q2LXU1 Sodium-translocating NADH-quinone reductase subu... 294 4e-78 UniRef50_D2RN95 Electron transport complex, RnfABCDGE type, D su... 294 4e-78 UniRef50_C9XNL3 Electron transport complex protein n=9 Tax=Bacte... 291 3e-77 UniRef50_A6TQH0 Electron transport complex, RnfABCDGE type, D su... 291 4e-77 UniRef50_B5YE56 RnfD/nqrB n=3 Tax=Bacteria RepID=B5YE56_DICT6 290 6e-77 UniRef50_Q73PG2 Na(+)-translocating NADH-quinone reductase, B su... 289 1e-76 UniRef50_C3WYL8 Na(+)-translocating NADH-quinone reductase subun... 289 1e-76 UniRef50_A1WT47 Electron transport complex, RnfABCDGE type, D su... 289 1e-76 UniRef50_Q5P536 Electron transport complex protein rnfD (Nitroge... 289 1e-76 UniRef50_A5TRQ5 NADH dehydrogenase (Ubiquinone), RnfD subunit n=... 287 3e-76 UniRef50_Q9EVN4 Electron transport complex protein rnfD n=20 Tax... 287 6e-76 UniRef50_A6NPN1 Putative uncharacterized protein n=1 Tax=Bactero... 286 1e-75 UniRef50_A8ZSV3 Electron transport complex, RnfABCDGE type, D su... 284 3e-75 UniRef50_C1QFU9 Electron transport complex, RnfABCDGE type, D su... 284 4e-75 UniRef50_D1VUL1 Electron transport complex protein RnfD n=1 Tax=... 280 4e-74 UniRef50_C7GZP4 Na(+)-translocating NADH-quinone reductase, B su... 279 8e-74 UniRef50_B2A143 Electron transport complex, RnfABCDGE type, D su... 279 1e-73 UniRef50_UPI0001C35E54 electron transport complex, RnfABCDGE typ... 278 2e-73 UniRef50_A1WTR8 Electron transport complex protein rnfD n=2 Tax=... 277 3e-73 UniRef50_C7H9I4 Na-translocating NADH-quinone reductase, Nqr2 su... 274 4e-72 UniRef50_A7C2T7 Electron transport complex, NQR2 and RnfD n=2 Ta... 274 4e-72 UniRef50_C6L9Q2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 270 4e-71 UniRef50_C8WMP8 Electron transport complex, RnfABCDGE type, D su... 270 5e-71 UniRef50_C1D7J0 Electron transport complex, NQR2 and RnfD n=3 Ta... 269 9e-71 UniRef50_Q3SHB5 Electron transport complex, RnfABCDGE type, D su... 269 1e-70 UniRef50_B6BWH4 Na-translocating NADH-quinone reductase, Nqr2 su... 268 2e-70 UniRef50_B9Y6Y9 Putative uncharacterized protein n=1 Tax=Holdema... 264 5e-69 UniRef50_C4Z023 Electron transport complex protein RnfD n=38 Tax... 264 5e-69 UniRef50_D1U4Y0 Electron transport complex, RnfABCDGE type, D su... 262 1e-68 UniRef50_C9A8K0 RnfD protein n=3 Tax=Enterococcus casseliflavus ... 262 2e-68 UniRef50_C6BWF3 NADH:ubiquinone oxidoreductase, subunit B n=2 Ta... 261 3e-68 UniRef50_A5CXQ4 Electron transport complex protein RnfD n=2 Tax=... 260 5e-68 UniRef50_B2A1V3 Electron transport complex, RnfABCDGE type, D su... 260 6e-68 UniRef50_C4FA61 Putative uncharacterized protein n=2 Tax=Collins... 259 9e-68 UniRef50_A1ZH15 NADH:ubiquinone oxidoreductase, na(+)-translocat... 258 3e-67 UniRef50_A4BWI5 Na(+)-translocating NADH-quinone reductase subun... 257 5e-67 UniRef50_A6L5A0 Na+-translocating NADH-quinone reductase subunit... 256 1e-66 UniRef50_A8ZWA7 NADH:ubiquinone oxidoreductase, subunit B n=4 Ta... 254 3e-66 UniRef50_C2MAM1 NADH:ubiquinone oxidoreductase, na(+)-translocat... 254 4e-66 UniRef50_Q52715 Electron transport complex protein rnfD n=1 Tax=... 253 8e-66 UniRef50_C0BFX7 NADH:ubiquinone oxidoreductase, subunit B n=1 Ta... 252 2e-65 UniRef50_A6DRQ1 Na(+)-translocating NADH-quinone reductase subun... 250 4e-65 UniRef50_C9LBM8 Na(+)-translocating NADH-quinone reductase, B su... 249 2e-64 UniRef50_Q0AAH0 Electron transport complex, RnfABCDGE type, D su... 248 2e-64 UniRef50_Q1QX85 Na(+)-translocating NADH-quinone reductase subun... 247 4e-64 UniRef50_Q7MIC8 Na(+)-translocating NADH-quinone reductase subun... 247 5e-64 UniRef50_Q315L3 Electron transport complex, RnfABCDGE type, D su... 245 1e-63 UniRef50_Q4K755 Electron transport complex, RnfABCDGE type, D su... 245 2e-63 UniRef50_C6BZS9 Electron transport complex, RnfABCDGE type, D su... 245 2e-63 UniRef50_B0S2D0 Sodium-translocating NADH-quinone reductase subu... 245 2e-63 UniRef50_B0MXK4 Putative uncharacterized protein n=1 Tax=Alistip... 245 2e-63 UniRef50_A4CPG2 Na(+)-translocating NADH-quinone reductase subun... 240 4e-62 UniRef50_Q1K3T0 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 239 9e-62 UniRef50_C6BTM1 Electron transport complex, RnfABCDGE type, D su... 239 2e-61 UniRef50_B6WV80 Putative uncharacterized protein n=1 Tax=Desulfo... 238 2e-61 UniRef50_A4SQL9 Na(+)-translocating NADH-quinone reductase subun... 233 1e-59 UniRef50_A6TT06 NQR2 and RnfD family protein n=2 Tax=Bacteria Re... 230 4e-59 UniRef50_B8J065 NQR2 and RnfD family protein n=1 Tax=Desulfovibr... 230 8e-59 UniRef50_Q1Q257 Similar to Na(+)-translocating NADH-quinone redu... 228 2e-58 UniRef50_D2MNQ0 NQR2 and RnfD family protein (Fragment) n=1 Tax=... 227 3e-58 UniRef50_A6WSA0 NADH:ubiquinone oxidoreductase, subunit B n=20 T... 227 5e-58 UniRef50_B0P6D0 Putative uncharacterized protein n=1 Tax=Anaerot... 227 7e-58 UniRef50_C8WYR0 Electron transport complex, RnfABCDGE type, D su... 224 4e-57 UniRef50_D1AFF8 NQR2 and RnfD family protein n=1 Tax=Sebaldella ... 221 2e-56 UniRef50_C9N0N0 Electron transport complex, RnfABCDGE type, D su... 221 3e-56 UniRef50_A8RDS0 Putative uncharacterized protein n=2 Tax=unclass... 220 5e-56 UniRef50_A5EVI1 Electron transport complex protein, D subunit n=... 220 7e-56 UniRef50_B8FN65 NQR2 and RnfD family protein n=3 Tax=Desulfobact... 218 3e-55 UniRef50_A7HKQ1 NQR2 and RnfD family protein n=5 Tax=Thermotogac... 213 1e-53 UniRef50_A1WUZ1 Electron transport complex, RnfABCDGE type, D su... 210 5e-53 UniRef50_C1I7V3 Putative uncharacterized protein n=1 Tax=Clostri... 209 2e-52 UniRef50_B0MP93 Putative uncharacterized protein n=1 Tax=Eubacte... 208 3e-52 UniRef50_C7NCF4 NQR2 and RnfD family protein n=2 Tax=Leptotrichi... 201 3e-50 UniRef50_C0EE37 Putative uncharacterized protein n=1 Tax=Clostri... 201 4e-50 UniRef50_A9NEB1 NADH oxidoreductase complex RnfABCDGE type, D su... 192 1e-47 UniRef50_Q12W78 Electron transport complex protein rnfD n=2 Tax=... 188 2e-46 UniRef50_C3X8F5 Electron transport complex n=1 Tax=Oxalobacter f... 188 2e-46 UniRef50_A4MZD3 Electron transport complex protein RnfD n=1 Tax=... 185 2e-45 UniRef50_A8S6D0 Putative uncharacterized protein n=2 Tax=Faecali... 182 1e-44 UniRef50_A9NGU6 Na+-transporting NADH:ubiquinone oxidoreductase ... 179 1e-43 UniRef50_Q73MW5 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema ... 161 3e-38 UniRef50_C7NE07 NADH:ubiquinone oxidoreductase subunit RnfD-like... 161 3e-38 UniRef50_C8PP64 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema ... 155 2e-36 UniRef50_D1RAM2 Putative uncharacterized protein n=1 Tax=Parachl... 153 9e-36 UniRef50_UPI0001C372ED NADH:ubiquinone oxidoreductase, RnfD subu... 151 4e-35 UniRef50_UPI0001698867 electron transport complex, RnfABCDGE typ... 146 2e-33 UniRef50_D1PJN0 Putative uncharacterized protein n=1 Tax=Subdoli... 145 2e-33 UniRef50_UPI00017427D7 electron transport complex protein RnfC n... 133 1e-29 UniRef50_B2S298 Hypothetical integral membrane protein n=2 Tax=T... 132 2e-29 UniRef50_Q3KM84 Na(+)-translocating NADH-quinone reductase subun... 131 4e-29 UniRef50_B5RQQ1 Uncharacterized conserved protein n=24 Tax=Borre... 129 1e-28 UniRef50_Q8YVI1 Alr1997 protein n=17 Tax=Cyanobacteria RepID=Q8Y... 86 2e-15 UniRef50_A7BVL8 Putative uncharacterized protein n=1 Tax=Beggiat... 85 5e-15 UniRef50_A9D761 Na(+)-translocating NADH-quinone reductase subun... 81 6e-14 UniRef50_C4GIQ6 Putative uncharacterized protein n=1 Tax=Kingell... 81 8e-14 UniRef50_A9DQU2 Na(+)-translocating NADH-quinone reductase subun... 75 3e-12 UniRef50_UPI00016996B3 hypothetical protein Epers_17019 n=1 Tax=... 74 6e-12 UniRef50_UPI0001698C61 Electron transport complex, RnfABCDGE typ... 73 1e-11 UniRef50_UPI0001699E71 hypothetical protein Epers_14217 n=1 Tax=... 52 3e-05 UniRef50_C0B3W9 Putative uncharacterized protein n=1 Tax=Proteus... 52 4e-05 Sequences not found previously or not previously below threshold: UniRef50_A5EU44 Putative uncharacterized protein n=2 Tax=Bradyrh... 56 3e-06 UniRef50_Q1CWI3 FG-GAP repeat protein n=2 Tax=Myxococcales RepID... 54 9e-06 UniRef50_A4AIL5 Putative uncharacterized protein n=1 Tax=marine ... 50 1e-04 UniRef50_Q478E7 Putative uncharacterized protein n=1 Tax=Dechlor... 49 2e-04 UniRef50_Q988S3 Mll6619 protein n=1 Tax=Mesorhizobium loti RepID... 48 4e-04 UniRef50_Q84HM4 UnbU n=2 Tax=Actinomycetales RepID=Q84HM4_NOCAE 44 0.009 UniRef50_B5SP93 Putative UnbU protein n=1 Tax=Actinomyces sp. Lu... 43 0.013 UniRef50_B5GNM9 Integral membrane protein n=12 Tax=Streptomyces ... 43 0.014 UniRef50_C1A9E7 Hypothetical membrane protein n=1 Tax=Gemmatimon... 43 0.021 UniRef50_D0L5Q6 Oxidoreductase FAD/NAD(P)-binding domain protein... 42 0.031 UniRef50_Q84HJ4 UnbU n=26 Tax=Actinomycetales RepID=Q84HJ4_STRMA 41 0.069 >UniRef50_Q15RL2 Electron transport complex protein rnfD n=81 Tax=Proteobacteria RepID=RNFD_PSEA6 Length = 357 Score = 346 bits (887), Expect = 9e-94, Method: Composition-based stats. Identities = 183/351 (52%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +++ASSP+ H +R T ++M +V+ A +PGI Q WFFG+G LVQI LA ++A++ EA Sbjct: 1 MNYKLASSPHQHVRRNTGQVMRMVIYALIPGILLQTWFFGFGVLVQIALAVITAVVTEAT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L++RK++ +KD SA+LT +LLA+SIPP APWW++V+GT FA+ + KQLYGGLG N Sbjct: 61 ILEMRKRNFERAIKDYSAILTAILLAISIPPFAPWWVIVIGTFFAIAMVKQLYGGLGFNV 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM YV+LL+SFPVQMT WLP + + PG IDAI +F+G +A G + L+ Sbjct: 121 FNPAMAAYVMLLVSFPVQMTQWLPAQSLTAHQPGLIDAIYAVFTGFSADGFSLAQLQGAA 180 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DG + ATPLD KT + G + E+ +Q I+ G L G GW WV+ +L GG++L+ K I Sbjct: 181 DGHTMATPLDAIKTGLAQGLTYEEGLQSAIFDGSL-GIGWWWVSTGYLLGGLYLIRAKII 239 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 WHIP L ALCA + +L + A+P H+ +G+ +LGAFFI TDPV+ASTTN+GR Sbjct: 240 NWHIPGGMLAGAALCAGVMFLVDADRFASPLFHIFNGSLILGAFFIATDPVSASTTNKGR 299 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +IFGA G V++IR++GGYPD +AF+VL+ N+ VPLIDYYTRPR YGH K Sbjct: 300 IIFGAAIGFWVYVIRTWGGYPDAIAFSVLIMNMAVPLIDYYTRPRTYGHTK 350 >UniRef50_Q482U6 Electron transport complex protein rnfD n=103 Tax=Gammaproteobacteria RepID=RNFD_COLP3 Length = 353 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 191/352 (54%), Positives = 253/352 (71%), Gaps = 1/352 (0%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F IASSP+ HN +T +M LV+ A +PG+ AQ +FFGWG L+ I LA +A++ E Sbjct: 1 MAFWIASSPHNHNHTKTPNLMRLVIYATLPGVLAQWYFFGWGNLIHIGLAMTTAIICEFT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 VL LRK+ ++ L D SALLT LLL + +P LAPWW+ V+GT+FA++I KQLYGGLG NP Sbjct: 61 VLSLRKKPISHELFDGSALLTALLLGICLPALAPWWITVIGTMFAIVIVKQLYGGLGHNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM GYV+LL+SFP+QMT W PP + F + + I +G T G + +R I Sbjct: 121 FNPAMAGYVMLLVSFPLQMTLWQPPLTLVAVDLNFTNTLTTILTGFTVEGYSVEQVRTSI 180 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DGI+ ATPLDT KT+ G +V + ++ PI+ G GW+WVN +L GG++L+ +KAI Sbjct: 181 DGITMATPLDTLKTNTGLGLTVLESIKNPIF-GENLALGWEWVNAGFLLGGLFLISRKAI 239 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W P+SFL++L +C+ +G+ SP++ A+ H SGATMLGAFFILTDPVT +T+N+GR Sbjct: 240 AWQTPISFLLSLFICSFIGYSISPDSSASTMFHWFSGATMLGAFFILTDPVTGATSNKGR 299 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +I G LAGLLV+LIR+ GGYPDGVAFA+LL N++ PLID YTRPR YGH KG Sbjct: 300 IIVGLLAGLLVYLIRTSGGYPDGVAFAILLCNMSAPLIDQYTRPRTYGHLKG 351 >UniRef50_A0L5G5 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Proteobacteria RepID=A0L5G5_MAGSM Length = 355 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 143/359 (39%), Positives = 213/359 (59%), Gaps = 18/359 (5%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SSP+ H ++ML V+ A P ++ FGW L+ I+L +S ++ E L Sbjct: 1 MTLMTSSSPHVHGGDSVDKVMLNVIKALAPATLLSIFLFGWPALLVIVLTVLSCVVMERL 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 LR + +T+ D SA+LTGLLLA+++PP +PWW+ V+G VFA+ + K +YGGLG N Sbjct: 61 TNMLRGRP--STIGDYSAILTGLLLALTLPPHSPWWICVVGGVFAIGVGKSVYGGLGYNM 118 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEI-AVNIPGFIDAIQVIFSGHTASGGDMNTLRLG 179 FNPA+I V LLISFPVQ+T+W + A + + +IF+G S Sbjct: 119 FNPALIARVFLLISFPVQLTTWPQISPLFAADSFSLAQSFSIIFAGDYGSVV-------- 170 Query: 180 IDGISQATPLDTFKTSVRAGHSVEQIMQYPI-------YSGILAGAGWQWVNLAWLAGGV 232 +D I+ ATPL ++ G SV + + +G + G+ + LA +AGG+ Sbjct: 171 MDSITAATPLGHYRIETGLGKSVAEALGGDFGFSFSHSIAGDIGGSLGETSALALVAGGI 230 Query: 233 WLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVT 292 W++ + I WHIP+S ++ + A + WL + + P HL++G +LGAFF+ TD VT Sbjct: 231 WMIRKGLITWHIPVSMILGTVIPATVMWLINGDVYPDPLFHLVTGGLLLGAFFMATDMVT 290 Query: 293 ASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + T RG LIFG L G+L ++IR++GGYP+GV+FAV++ N VPLID YT+P VYG K Sbjct: 291 SPVTPRGMLIFGGLCGVLTYVIRTWGGYPEGVSFAVVIMNTAVPLIDQYTKPVVYGKSK 349 >UniRef50_Q31GU5 NADH oxidoreductase, RnfABCDGE type, D subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GU5_THICR Length = 343 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 156/351 (44%), Positives = 222/351 (63%), Gaps = 8/351 (2%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SP+THN ++ML V +AA P + ++FFG+G +Q LA ++ ++ E Sbjct: 1 MATIPHTSPFTHNASSVRKVMLQVQIAAFPALMTHIYFFGFGITIQWTLAVLTLIIVETT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +LKLR + VA L D S L+T + IPP APWW++V G FA+I K LYGGLG NP Sbjct: 61 LLKLRDRPVAPYLFDLSGLITVTGIVFCIPPEAPWWVIVSGVTFALIFGKHLYGGLGYNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GY LLISFP ++T W P E++ + FI++ +IF+G +L L Sbjct: 121 FNPAMLGYAFLLISFPAELTQWTLPSEVSGHHISFIESFHLIFTGQ--------SLNLSF 172 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D ++ ATPLD KT++ G V + ++G GW W+N+A+ GG+W+L+++AI Sbjct: 173 DQLTGATPLDEVKTALSMGVPVTTTLNSSNFNGEQIPYGWAWINMAFFLGGLWMLYKRAI 232 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RW P+ FL TLA A L P T A HLL+G ML AFFI+TDPVT+STT GR Sbjct: 233 RWQYPVGFLGTLAAIAYLFNWIDPNTYAPASFHLLTGGIMLAAFFIITDPVTSSTTPLGR 292 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 ++ A +LV++IR++G +PDG+AF +L+ N+ VPLID YT+PRV G+R+ Sbjct: 293 FVYAAGIAVLVYVIRNWGAFPDGIAFGILIMNMFVPLIDQYTQPRVVGYRR 343 >UniRef50_Q4QJQ5 Electron transport complex protein rnfD n=74 Tax=Gammaproteobacteria RepID=RNFD_HAEI8 Length = 358 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 247/353 (69%), Gaps = 6/353 (1%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 +F++ SSP+TH+ + T+ IML V+LA +P Q+++FG+G ++Q LA +A++AE + Sbjct: 1 MFKMVSSPHTHSGKLTAHIMLWVILAMMPAFFTQIYYFGFGVVLQSALAIGTAIIAEFIA 60 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 +KLR + L D S LT L+LA++IPP AP+W++++GT+ AV++ KQ+YGGLGQNPF Sbjct: 61 IKLRGKKPLNYLSDFSVALTALILAMAIPPYAPYWIIIIGTLCAVLLGKQVYGGLGQNPF 120 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPAMIGYV+LLISFP+QMT+W+PP + P F D +IFSG T G ++ L ID Sbjct: 121 NPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDTFSLIFSGLTTDGFTLSQLTHNID 180 Query: 182 GISQATPLDTFKTSVRAGHSVE---QIMQYPIYSGILA--GAGWQWVNLAWLAGGVWLLW 236 GI+QATPLD+ K ++ + + ++++ PI+ G GW +N+A+LAGG++L+ Sbjct: 181 GITQATPLDSAKIFYKSHNQLSDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLIL 240 Query: 237 QKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTT 296 ++ I W IP++ LVT A F+ T + L+SGA M GAFFI TDPVTAS T Sbjct: 241 KRIIHWQIPVAMLVTFFCLAT-ATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASIT 299 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 RG++IFGAL GL V+LIR G YPDGVAFA+LL+NI VPLID+YTRPRV G+ Sbjct: 300 PRGKIIFGALVGLFVYLIRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGY 352 >UniRef50_Q3A7W9 NADH:ubiquinone oxidoreductase, RnfD subunit-like n=4 Tax=Bacteria RepID=Q3A7W9_PELCD Length = 334 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 130/349 (37%), Positives = 186/349 (53%), Gaps = 33/349 (9%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++ SP+ H T +M V+LA +P ++ FG + + + SA+ EAL Sbjct: 8 LSVSCSPHLHCGMTTRGMMGAVILALLPAAVVAVYLFGLAAVAVMTICVASAVAVEALWQ 67 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K V T+ D SA+LTGLL+A ++PP +PWW+ +LG+V A++I KQ++GGLG NPFN Sbjct: 68 KAVGSPV--TVSDGSAVLTGLLVAFNLPPSSPWWLALLGSVIAIVIGKQVFGGLGHNPFN 125 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA++ +VLL+SFP MT W P D Sbjct: 126 PALVARIVLLVSFPTVMTHWSGPQPGRFLA----------------------------DA 157 Query: 183 ISQATPLDTFKTSVRAGHSVE---QIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 ++ ATPL K++V + G +AG + LA L G ++LLW++ Sbjct: 158 VTAATPLSETKSAVMLSGHLPPNATGFALDYLLGNMAGCLGEVSALALLIGALFLLWRRV 217 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I WHIP+S++ T+A + + WL P P HLLSG MLGAF++ TD VT+ T R Sbjct: 218 ISWHIPVSYIGTVATVSGMFWLVDPSRYPHPVFHLLSGGLMLGAFYMATDLVTSPLTGRS 277 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 L++G GL LIR FG YP+GVAF++LL N PL+D Y PR +G Sbjct: 278 MLLYGCGCGLFTVLIRLFGSYPEGVAFSILLMNTVTPLLDRYLVPRPFG 326 >UniRef50_D0L1N4 Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Gammaproteobacteria RepID=D0L1N4_HALNC Length = 349 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 169/351 (48%), Positives = 227/351 (64%), Gaps = 7/351 (1%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F ++P R+ML VLLA +PG A + GWG L+ ILLA ++ L+AEA Sbjct: 1 MKFSPQTAPLPEVSNSVRRVMLTVLLAMLPGTAVAIALLGWGVLINILLAVIAGLVAEAA 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L LR + V + D S ++ +LA+ +P L PWW+ V GTVFAV++AKQLYGGLG N Sbjct: 61 MLTLRARPVRPAIGDGSVIVLAWILALCLPNLGPWWLPVFGTVFAVVVAKQLYGGLGFNL 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GYVVLLISFP MT W P + + + F+ ++ FSG +G G Sbjct: 121 FNPAMVGYVVLLISFPEPMTRWGPAIDSSGSALNFMQSLAWSFSGVLPNGV-------GY 173 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 DG+S ATPLD + + G ++ + Q LA + W++LA+LAGG +LLW+ I Sbjct: 174 DGLSVATPLDHAREQLSTGATIHNVTQSLFSGTSLAQSWNLWLSLAFLAGGAFLLWRGVI 233 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RWHIP++ + + + + WL A+P HL++GAT+ GAFF+ TDPVTASTT RGR Sbjct: 234 RWHIPVAMITGVLVMSGFLWLLDSARHASPLFHLITGATVFGAFFVATDPVTASTTPRGR 293 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 LIFG G+L LIRSFG YPDGVAFAVLL N+ VPLIDYY++P+V+GH+K Sbjct: 294 LIFGFGIGVLTVLIRSFGSYPDGVAFAVLLMNLCVPLIDYYSQPKVFGHKK 344 >UniRef50_B0K145 Electron transport complex, RnfABCDGE type, D subunit n=36 Tax=Clostridia RepID=B0K145_THEPX Length = 335 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 190/350 (54%), Gaps = 27/350 (7%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + RIML V++A P I ++ FG L IL++ S++L EAL+ Sbjct: 13 KLLVSSSPHIRSNESVQRIMLDVVIALTPAIIGSVYLFGLNALKLILISVASSVLFEALI 72 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KL K+ + T+ D SA +TG+L+A ++P APWW+ V+G+ FA+I+ KQL+GGLG N Sbjct: 73 QKLFKKPI--TITDFSAAITGILIAFNLPASAPWWLPVIGSAFAIIVVKQLFGGLGANFM 130 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ +L+ S+PV MT++ V S ++ + D Sbjct: 131 NPALAARAMLMTSWPVHMTNYTGTRPDVV-----------------TSATPLSIMGTRPD 173 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++ ATPL K G E ++ G + G + L L G V+L+ +K I Sbjct: 174 VVTSATPLSIMKY----GTGAELPTLRDMFIGNIPGVIGETSALLLLIGAVYLIIRKVID 229 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP+ ++ T + +L P+ L H+L G +LGAF++ TD ++ T GR+ Sbjct: 230 WKIPVFYIGTTFIMLLLLG-VEPKLLP---YHILGGGLILGAFYMATDYSSSPVTPLGRI 285 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IF AG+L +IR G YP+GV++++LL N+ PLI+ +T+P V+G K Sbjct: 286 IFAVGAGILTAIIRVKGAYPEGVSYSILLMNVATPLIEKFTKPNVFGKVK 335 >UniRef50_C7RDT6 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RDT6_ANAPD Length = 325 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 187/348 (53%), Gaps = 38/348 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + +SP+ + R + ML V++A +P A +++FG+ L+ IL + ++ +L+E + Sbjct: 7 LLVTASPHVRSNRTVKKDMLDVIIALIPAGLASVYYFGYRALILILASVITCVLSEYIFN 66 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K K++ ++KD SA++TG+LLA ++P P W +V+G +FA+I+AK +GG+GQN N Sbjct: 67 KATKRN--QSIKDLSAVVTGILLAYNVPFTLPVWQMVIGAMFAIIVAKMFFGGIGQNIVN 124 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ L+ S+ MTS++PP +A + Sbjct: 125 PALAARAFLMASWSETMTSFVPPQRVATLKTV-----------------------KDVSM 161 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +S ATPL ++ G + G + LA L G +L+ +K I Sbjct: 162 VSGATPLS----------DPASFSTMDLFLGNIPGCLGEVSALAILIGACYLIVRKVIHV 211 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IPL++++T + + P+ AA ++LSG +LGAFF+ TD T T +G+ + Sbjct: 212 RIPLTYILTATVLLGIFG---PDGFAASLRNVLSGGLLLGAFFMATDYTTTPMTIKGQYV 268 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 F AG+L +IR +GGYP+GV++++LL N+ VP+I+ +TRP+ +G Sbjct: 269 FAIGAGILTAIIRVWGGYPEGVSYSILLMNLVVPIIEAHTRPKTFGKV 316 >UniRef50_A6LW78 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW78_CLOB8 Length = 345 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 112/352 (31%), Positives = 182/352 (51%), Gaps = 38/352 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 F +++SP+ S+IM V +A P +++FG L+ +++ + SA+ E LV Sbjct: 27 FTVSASPHIRCDESISKIMWNVNIALAPAAIFSIYYFGIPALINLVVGAASAVAFEYLVQ 86 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K RK+ + T D SA LTGLLLA+ + P P +M++ G+ A++IAK GGLG N FN Sbjct: 87 KFRKKKI--TAFDGSAFLTGLLLAMCVSPTLPVYMIIAGSFVAIVIAKHSMGGLGYNIFN 144 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA IG L++S+PV MT+W + +D Sbjct: 145 PAHIGRAALMVSWPVAMTTWT-------------------------------KMTTSVDV 173 Query: 183 ISQATPLDTFKTSVRAGH----SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 +S ATPL+ K + + ++ G G+ + + + GG +L+++ Sbjct: 174 VSSATPLNILKQQGYSKLIETFGGNTELYKAMFIGTRNGSAGETSTILLIIGGAYLIYKG 233 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I+W +P+ + T+ + + S P H+++G ++GAFF+ TD VTA T + Sbjct: 234 YIKWQVPVCMIGTVGIITWIFGP-SGLFSGDPIFHMMAGGLIIGAFFMATDMVTAPITLK 292 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 G++IF AGL+ LIR GGYP+GV +++LL N PLID + +P+ +G R Sbjct: 293 GQIIFAVGAGLITSLIRLIGGYPEGVCYSLLLMNAVTPLIDRFVKPKQFGAR 344 >UniRef50_D1N842 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N842_9BACT Length = 365 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 183/346 (52%), Gaps = 26/346 (7%) Query: 17 TSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDN 76 RIM VLLA VP A +WFFG+ LV +++ + + AEAL KL + V T+ D Sbjct: 32 VRRIMYKVLLALVPAAIAGVWFFGFYALVVMVVTMLFCVGAEALWCKLAGKPVMGTIADG 91 Query: 77 SALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFP 136 SA +TGLLLA+++PP P W+ ++G A+ + KQ++GG+G NPFNPA++ V LLI+ P Sbjct: 92 SAAVTGLLLAMNLPPGVPLWVCLIGAFLAIWLGKQIFGGIGNNPFNPALVARVGLLIALP 151 Query: 137 VQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSV 196 MT+W P F + + +D I+ ATPL T+ Sbjct: 152 AIMTTWPVPRS---------------FDSADPAAKITHATDTPVDSITGATPLGEVGTTK 196 Query: 197 RAGHSVE-----------QIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIP 245 + E M + + G G + LA L GG+ L+ K I W +P Sbjct: 197 KILDKSEAAYANFQAVDNDAMLWKYFLGEKGGCIGETSVLALLIGGILLIALKLINWRVP 256 Query: 246 LSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGA 305 + ++ T+A+ L F P +P H+L+G M+GAFF+ TD VT+ T+ G ++F Sbjct: 257 VCYIGTVAIITGLVHFFYPGVSPSPLFHILTGGLMIGAFFMATDMVTSPITSTGCVVFAV 316 Query: 306 LAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G++ +IR +G YP+GV+F++L N VPLID + R +G+ + Sbjct: 317 GCGVITSVIRLWGNYPEGVSFSILFMNALVPLIDRWCSQRPFGYVR 362 >UniRef50_Q5LC49 Electron transport complex protein RnfD n=42 Tax=Bacteria RepID=Q5LC49_BACFN Length = 330 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 182/349 (52%), Gaps = 26/349 (7%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++ SP+ H + M VL+A +P L +FG G L+ + ++ L E + Sbjct: 4 KLIVSLSPHVHGGDSVQKNMYGVLIALIPAFIVSLVYFGLGALIVTATSVIACLFFEWAI 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K + T+ D SA++TG+LLA ++P P W+++LG +FA+ + K +GGLG NPF Sbjct: 64 GKFLLKKETTTICDGSAVITGVLLAFNLPSNLPVWIIILGALFAIGVGKMSFGGLGNNPF 123 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ G V LL+SFPVQMTSW ++ A + G D++ D Sbjct: 124 NPALAGRVFLLLSFPVQMTSWPVVGQLTAYTDATTAATPLALMKQAIHG-DVSAFGQLPD 182 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + ++ G G + A + G +++LW++ I Sbjct: 183 A-------------------------WSLFIGNNGGCLGEVSAAALILGLLYMLWKRIIT 217 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 WHIP+S LVT+ + + + L +PE +P I LLSG MLGA F+ TD VT+ + +G L Sbjct: 218 WHIPVSILVTVFVFSGIMHLANPEAYVSPVIQLLSGGLMLGAIFMATDYVTSPMSKKGML 277 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 I+G GLL +IR FG YP+G++FA+L+ N PLI+ Y +P+ +G Sbjct: 278 IYGVCIGLLTVVIRLFGAYPEGMSFAILIMNAFTPLINTYCKPKRFGEV 326 >UniRef50_C0WAW4 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAW4_9FIRM Length = 336 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 111/352 (31%), Positives = 181/352 (51%), Gaps = 37/352 (10%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 + SSP+ H + M V+LA VP I A +++F + ++ VSA++ E + K Sbjct: 12 LVTSSPHMHCGLTIGKSMREVMLALVPAIIASVYYFRMSAAIVMVTCVVSAIVFETICNK 71 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + + T++D SA LTGLLLA+ +P P +G++FA+++ K ++GGLG N FNP Sbjct: 72 VMHKP--NTVQDGSAALTGLLLAMCLPASMPPLFAAMGSMFAIVVGKAVFGGLGCNIFNP 129 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A IG +LL SFP QMT+W+ P A + D + Sbjct: 130 AHIGRAILLASFPQQMTNWVLPATAAAS-----------------------------DAV 160 Query: 184 SQATPLDTFK------TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQ 237 S ATPL + + A + + ++ G + G+ + A + GG++L+++ Sbjct: 161 STATPLAVMRATEKIWQAGGAASAAKLPDLMNLFWGNVGGSLGETCVPALVLGGLYLIYK 220 Query: 238 KAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTN 297 K I W IP+ +LVT+A+ + P HL +G M+GAFF+ TD VT+ T Sbjct: 221 KLIDWRIPVFYLVTVAILTGVYGAVMGYPSTFPLYHLFAGGLMIGAFFMATDWVTSPITK 280 Query: 298 RGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 +G++I+ G+L LIR G Y +GV +++L+ N+ P+ID + R +G Sbjct: 281 KGKIIYAIGLGVLTSLIRLRGSYTEGVCYSILMMNMVTPMIDRFVRNVSFGG 332 >UniRef50_B0VFN9 Electron transport complex protein rnfD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFN9_9BACT Length = 370 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 121/374 (32%), Positives = 189/374 (50%), Gaps = 35/374 (9%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 F ++ +P+ H++ T +M V+LA P + ++++G+ +L+ LL +VSA++ EA++ Sbjct: 7 RFIVSPAPHFHDKTTTKNVMWNVVLALTPALIFAIYYWGFNSLLLTLLGAVSAMVTEAII 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KLRK + T+ D SA LTG+LLA +I APWW+ VLG FA+ I KQ++GGLG NP Sbjct: 67 QKLRKVPI--TVSDGSAFLTGMLLAYNINAGAPWWVPVLGAAFAIAIGKQVFGGLGNNPV 124 Query: 122 NPAMIGYVVLLISFPVQMT-SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 NPA++G L+ S+P MT W P + I + + N Sbjct: 125 NPALLGRAFLMASWPTIMTAGWAKPKSG---------TLSGITDPNLIAVNLQNLSPKAY 175 Query: 181 DGISQATPLDTFKT---------------------SVRAGHSVEQIMQYPIYSGILAGAG 219 D ++ ATPL +T + + + ++ G + G Sbjct: 176 DLVTGATPLKVAQTLRDSSFVSSLGANAGQGFDLANRIFTNLTDLSALKNLFWGNIGGCI 235 Query: 220 WQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAA--PQIHLLSG 277 + A L G +LL++ I W IPL ++ T+ + + + P H+ SG Sbjct: 236 GEVSVFALLLGAAYLLYKNIIEWRIPLFYIGTVFVLSFFLAPLKGSGFSPLLPFFHIFSG 295 Query: 278 ATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPL 337 MLGAFF+ TD T T GR+IF G+L +IR +GGYP+GV +++L N+ PL Sbjct: 296 GLMLGAFFMATDYTTTPLTKSGRIIFAIGCGILTMVIRLWGGYPEGVCYSILFMNVMTPL 355 Query: 338 IDYYTRPRVYGHRK 351 ID T P+ +G K Sbjct: 356 IDKLTMPKAFGRVK 369 >UniRef50_UPI0001BC5C0E Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Fusobacterium RepID=UPI0001BC5C0E Length = 317 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 47/353 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ SP+ +M V++A +P ++ FG ++ +A ++ L+ E + Sbjct: 4 ILKMGPSPHIRTSETVESVMYDVIIALIPAFLIAVYVFGLRAIIVTGVAVLTCLVTEYIC 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ KQ + ++ D SA+LTG+L + IP + P V++G + A+ + K +YGGLG N F Sbjct: 64 QKIMKQDI--SIFDGSAVLTGILFSFVIPVIMPLPYVIIGCIIAIALGKMVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + S+PV +T++ D Sbjct: 122 NPALVGRAFVQASWPVAITTF------------------------------------AYD 145 Query: 182 GISQATPLDTFKTSVRAGHSV---EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 G + AT LD K + + + G + G + LA + GG +L+++K Sbjct: 146 GRTGATMLDAMKRGLDINTVLIANSGNLYLDALIGKMGGCLGETSALALILGGCYLIYKK 205 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I W +P + T+ + A P + +LSG MLGAFF+ TD VT+ T++ Sbjct: 206 QIDWKVPAVMIGTVFVMTWAMGA------ADPIMQILSGGLMLGAFFMATDMVTSPHTDK 259 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GR++F G LV IR GGYP+G A+A+L+ N VPLI+ Y RP+ +G K Sbjct: 260 GRVVFAFGIGFLVSCIRMKGGYPEGTAYAILIMNGVVPLINRYIRPKKFGEVK 312 >UniRef50_C1SKX3 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKX3_9BACT Length = 332 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 126/352 (35%), Positives = 199/352 (56%), Gaps = 31/352 (8%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + SP+ + T+ +M+LV+ A +P + ++++G + L+ + E L Sbjct: 8 KLLVTFSPHDRDPMTTNVVMMLVVAALMPSVIGSIYYYGHYAVKGYLVTIFFCIAFEYLF 67 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ + +KDNSALLTG+LLA+++P APWW++++G+ A++I+K +YGGLGQNPF Sbjct: 68 DKISHRKTQ--IKDNSALLTGVLLAMNMPAGAPWWLMLIGSFVAIVISKAVYGGLGQNPF 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G V LLI++P +MT+W+ P + + D Sbjct: 126 NPALVGRVFLLIAWPAEMTAWIVPQTVKNGLV--------------------------FD 159 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPI---YSGILAGAGWQWVNLAWLAGGVWLLWQK 238 +S ATPL + K + + V P+ G ++G+ L L GG+ LL Q+ Sbjct: 160 AVSTATPLGSMKADLLSQGHVVAGNIAPLTNQLIGNVSGSLGGDSALLVLIGGLVLLQQR 219 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I WHIP+SF+ T+ + + W +PE P +H++SG MLGAFF+ TD VT+ + R Sbjct: 220 IISWHIPVSFIGTVFVLTGIYWGIAPEMTINPLMHVVSGGVMLGAFFMATDYVTSPMSKR 279 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +LIFG GL+ +IR FG YP+GV FA+L+ N VPL+D Y RP+ +G + Sbjct: 280 AQLIFGFGCGLITVVIRLFGSYPEGVGFAILIMNAFVPLLDNYMRPKSFGEK 331 >UniRef50_B9ZJX0 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Gammaproteobacteria RepID=B9ZJX0_9GAMM Length = 353 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 232/352 (65%), Gaps = 8/352 (2%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M FR SSP+ +M VL+A VPG A WFFGWG LV +LL + A+ EA Sbjct: 1 MRFRTQSSPHVIPAHSVGGVMQQVLMALVPGTLAMTWFFGWGVLVNVLLGVLFAVAFEAA 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 ++ RK+ V ATL DNSA++TG L A++IPPLAP+W+ ++G FA+I+AK LYGGLG NP Sbjct: 61 MVAARKRPVMATLADNSAIVTGWLFALAIPPLAPFWVTLIGIAFAIIVAKHLYGGLGYNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPAM+GYVV+L+SFP +M W P + + + +Q + +G Sbjct: 121 FNPAMVGYVVVLVSFPREMALWPAPSTLPESPLTLLQTLQTVLTGSLPGA-------QAW 173 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D +++ATPLD + + +G +V +I P++ G GW+WV +L GG++LL+++ I Sbjct: 174 DAVTRATPLDAMREGLVSGRTVGEITASPLF-GSFTETGWEWVGNFFLLGGLYLLFRRII 232 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 WHIP++ ++ +A+ A WL P++ A+P H+ SGA ++GAFFI TDPV+ASTT GR Sbjct: 233 HWHIPVAVILGVAIPAGFFWLLDPDSFASPAFHVFSGAVIIGAFFIATDPVSASTTPLGR 292 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +++GA G+L+++IR++GGYPD VAFAVLL N+ P +D+ TRPR++G +G Sbjct: 293 ILYGAGIGVLIFVIRTWGGYPDAVAFAVLLMNMVAPTLDHLTRPRIFGRTRG 344 >UniRef50_B5JR41 Electron transport complex, RnfABCDGE type, D subunit subfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR41_9BACT Length = 344 Score = 306 bits (784), Expect = 7e-82, Method: Composition-based stats. Identities = 111/347 (31%), Positives = 168/347 (48%), Gaps = 10/347 (2%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + +SPY IM V+ A +P ++ FG L +++ + LL E V Sbjct: 3 LHTSPYLRPSASVEVIMRNVVYALLPICMFSVYQFGISVLALVIVCVGACLLTEHFVCLC 62 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + +T D S ++TGLLLA+++PP P WM + ++ V + K +GGLG N NPA Sbjct: 63 SSKP--STTNDWSVVITGLLLALTLPPGFPLWMAAVASIVGVAVGKLFFGGLGYNVMNPA 120 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G +F V MT+W+P ++ + F + + IDG + Sbjct: 121 LVGRAFAQAAFTVPMTTWVPYLSENRFTEFIPSSLTLPFLRPIPTADWVAE--NAIDGFA 178 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 ATPL K S+ + G AG+ + L L G +L+ ++ + W I Sbjct: 179 GATPLALMKFEQVPTDSI------QMLLGTTAGSSGETSALLILLCGAYLVMRRMMNWRI 232 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 S L+T A + +L +PE P L SG MLGA F+ TD V + T G I+G Sbjct: 233 TASVLLTAAATSGAFYLLNPEIYPDPLFTLCSGGLMLGAVFMATDMVASPVTPWGIWIYG 292 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 A G + +IR FGG P+GV +A+LLAN PLI T+P++YG K Sbjct: 293 AFIGFVTVIIRLFGGLPEGVMYAILLANAASPLISAATQPKIYGAVK 339 >UniRef50_B8CY14 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8CY14_HALOH Length = 307 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 186/349 (53%), Gaps = 51/349 (14%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + SSP+ + ++IM V+ + VP I A +WFF L+ I + V ALL E + Sbjct: 6 LVVTSSPHIRDVTTVNQIMWSVVFSLVPAIVAAVWFFKINALLVISVTVVFALLTEVIFQ 65 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 R + V T+ D SA++TG+LLA+++PP P W+ LG+V AV + KQ++GGLG NPFN Sbjct: 66 IARGKEV--TINDGSAVITGILLALTLPPTIPLWIAALGSVVAVGLGKQVFGGLGYNPFN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA++G L+ ++PV MT+W+ +DG Sbjct: 124 PALVGRAFLIAAYPVPMTTWI------------------------------------LDG 147 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + ATPL+ K+ + ++ G + G + LA L G V+L+++ I W Sbjct: 148 QTTATPLNLMKSDGILTD------YWDLFIGHIGGCLGETSALALLLGAVYLIYKGYIDW 201 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP L ++ + ML P HL +G +LGAF++ TD VT T GR I Sbjct: 202 RIPAGMLGSVFVLTMLSG-------QDPVFHLFAGGLVLGAFYMATDMVTTPVTKMGRWI 254 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 FG AGL+V +IR +GGYP+GV F++LL N+TVP+++ YTRPR G K Sbjct: 255 FGVGAGLIVVVIRLWGGYPEGVLFSILLMNMTVPILNRYTRPRSLGEVK 303 >UniRef50_B3PB33 Electron transport complex protein rnfD n=91 Tax=Gammaproteobacteria RepID=RNFD_CELJU Length = 356 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 172/355 (48%), Positives = 235/355 (66%), Gaps = 16/355 (4%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SP+ +TSR+MLLV+ A +PG+ WFFG G LV +LLAS+S +L EAL Sbjct: 1 MALLNITSPHAQGANRTSRLMLLVVYATIPGMFTMTWFFGPGVLVNVLLASISCMLFEAL 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +K R++ V L+D SAL+TG+L+ VS+PP PWW+++ G+ A+I+AKQLYGG+G NP Sbjct: 61 AIKARQRPVGFYLRDFSALVTGVLIGVSLPPYCPWWLLISGSFIAIILAKQLYGGMGFNP 120 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIA--VNIPGFIDAIQVIFSGHTASGGDMNTLRL 178 FNPAM+ Y +LL+SFPV+MT W P + +PG +D + +FSG Sbjct: 121 FNPAMVAYALLLVSFPVEMTQWAQPKPLWVDGQLPGLMDTLAKVFSG------------A 168 Query: 179 GIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 IDG S AT LD K + Q + G A AGW+WVN+A+L GG++LL++K Sbjct: 169 PIDGYSGATALDIIKQNKGLVLGDLYQQQPLLAEGRWASAGWEWVNIAFLFGGLYLLYKK 228 Query: 239 AIRWHIPLSFLVTLALCAMLGW-LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTN 297 WH P+S L+ LAL A L + S + +P HLL+GATMLGAFFI+TDPV+++ + Sbjct: 229 VYTWHAPVSMLLALALMAALFYDSGSSSSSGSPLFHLLTGATMLGAFFIVTDPVSSTVST 288 Query: 298 RGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +GR+I+GAL G+LV++IR++G YPDGVAFAVLL N P IDYYT PR YGH+K Sbjct: 289 KGRVIYGALIGMLVYVIRTWGSSYPDGVAFAVLLMNFAAPFIDYYTTPRTYGHKK 343 >UniRef50_C4L9H7 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9H7_TOLAT Length = 326 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 134/342 (39%), Positives = 187/342 (54%), Gaps = 28/342 (8%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 +P+ H ++M V +A +P + + FG L ++ +SAL E + LKL + Sbjct: 6 APHAHEGISIKKVMFKVNIALLPAVLLGILQFGMPALFLVVTTILSALACEVISLKLNPR 65 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 + D +A+LT L+LA+S+PP AP W+ LG+ FA+ KQ+YGGLGQN FNPAM+ Sbjct: 66 -AQGKINDGAAILTALILAMSLPPHAPLWLGALGSAFAIFFGKQVYGGLGQNLFNPAMLA 124 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 VVLLISFPV+MT W+ P I ++G+DG+S AT Sbjct: 125 RVVLLISFPVEMTKWITPSAFYDGI----------------------WYKMGVDGVSGAT 162 Query: 188 PLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 L K G G G+ + + L GGVWL+ Q+ WH+PL+ Sbjct: 163 TLGLSKEGAETG-----FHWLSHVLGTSTGSLGETSAMLMLLGGVWLIHQQVFTWHVPLA 217 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L L WL P + P L SG ++ AFFI TDPVT T+NRG+LIFGA Sbjct: 218 TLAGCLLPGTAMWLSDPAAIPEPLAQLTSGGLLMCAFFIATDPVTTPTSNRGKLIFGAGT 277 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G L+++IR+FG +P+GVAF++L+ N PLID YTRPR+YG+ Sbjct: 278 GFLIFVIRAFGNFPEGVAFSILIMNAVTPLIDQYTRPRMYGY 319 >UniRef50_A9KRW8 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Clostridiales RepID=A9KRW8_CLOPH Length = 336 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 175/347 (50%), Gaps = 22/347 (6%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++ +++SP+ + T++IM V +A +P ++ FG+ + +L++ S +++E L Sbjct: 4 MYNVSASPHVRSGVTTAQIMRDVAIALMPACLFGIYQFGFSAFLVLLVSVTSCVVSEFLY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 +L K + SAL+TGLL+ +++P P W+ ++G VFA+I+ KQLYGGLGQN Sbjct: 64 ERLMKHPYRPY--ECSALVTGLLIGMNMPATIPVWIPMVGGVFAIIVVKQLYGGLGQNFM 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ L I F +MT++ + N G+D Sbjct: 122 NPALAARCFLSICFTSRMTTFAVDAFTNSGTSS-------------RTLYLFNYGYAGLD 168 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 G+S ATPL K S ++ G G + + L G +LL+++ I Sbjct: 169 GVSGATPLAAMKA------SEAAPSLLDMFFGFHGGVIGETSAMMLLIGACYLLYRRIIS 222 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPL+++ T A+ +L + +L G +LGAFF+ TD VT T G++ Sbjct: 223 LRIPLTYIATFAVFIILFS-GKGFDVEYVLAQILGGGLILGAFFMATDYVTCPITKYGQI 281 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 +FG G L L R FGG +GV++A++ N+ VPLI+ T PR +G Sbjct: 282 LFGVCLGALTGLFRVFGGSAEGVSYAIIFCNLLVPLIEKITMPRGFG 328 >UniRef50_Q0TQI7 Electron transport complex, RnfABCDGE type, D subunit n=14 Tax=Bacteria RepID=Q0TQI7_CLOP1 Length = 326 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 107/350 (30%), Positives = 182/350 (52%), Gaps = 44/350 (12%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + SSP+ ++ T IM VL+A +P + FG + I ++SA+++E Sbjct: 21 NLLVDSSPHIKDKLSTQSIMRDVLIALIPTSLVGVLVFGLRAIFIIATCAISAVISEYAF 80 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ K+ + T+KD SA++TG+LLA+++P P W+ +G++ A+++ KQ++GG+G N Sbjct: 81 QKITKKEI--TIKDLSAIVTGVLLALNLPINTPLWVACIGSIVAIVLVKQIFGGIGCNFM 138 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ LL ++P ++ + +D Sbjct: 139 NPALAARAFLLAAWPESISIFT------------------------------------LD 162 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 G++ ATPL K + G +AG + +LA L G ++LL++K I Sbjct: 163 GVTTATPLALLKNGQ-----GNLPSLSNAFLGNIAGCIGEVSSLAILIGALYLLYRKVIT 217 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 WHIPL ++ T+ + + + + +G LGAFF+ TD VT+ T +G++ Sbjct: 218 WHIPLVYIGTVLILTTVIGR-NGFLSGNGIYEIFTGGLFLGAFFMATDYVTSPLTKKGQI 276 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IF GL+ LIR FGGYP+GV++++LL N+ VP+IDYY +P+ +G+ K Sbjct: 277 IFAFGCGLITTLIRIFGGYPEGVSYSILLMNLLVPVIDYYIKPKAFGNEK 326 >UniRef50_A9BJD1 Electron transport complex, RnfABCDGE type, D subunit n=12 Tax=Thermotogaceae RepID=A9BJD1_PETMO Length = 326 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 111/352 (31%), Positives = 189/352 (53%), Gaps = 31/352 (8%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M ++P+ T +IM+ VL++ +P + A W FG+ L +L + V A + + Sbjct: 1 MNLSTEAAPHFRTTNTTRKIMIDVLISLIPAVIASTWIFGFRALFIMLFSMVFAEMLDFS 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +++ ++ + D SA +TGLLL +++ WW ++LG V A+I+AKQ++GGLGQN Sbjct: 61 IVRFIRKQ-KDHIPDFSASVTGLLLGMNLSLAVNWWQIMLGVVIAIILAKQVFGGLGQNF 119 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPA++G +LISFP MT+W P Sbjct: 120 FNPALVGRAFMLISFPTAMTTWYVPF-----------------------------YYQNP 150 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D ++ A+ L + ++ + ++ G + G+ + LA + G ++L+ + I Sbjct: 151 DIVTSASVLGIISEEGMSTV-LQNYTYWDMFIGTIPGSIGEVSALALIIGFIYLVIKGRI 209 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 + IP+S++ T+ + + + ++ P P HLL+G +LGA F+ TD VT+ T G+ Sbjct: 210 KLMIPVSYIGTVLIFSSVFYMVDPTKFGTPLFHLLAGGLILGALFMATDMVTSPMTKMGQ 269 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 L+FG AG+L +IR FG YP+GV+F++L+ N VPLID + +P++YG KG Sbjct: 270 LVFGVGAGILTMIIRFFGSYPEGVSFSILIMNAFVPLIDDWLKPKIYGTTKG 321 >UniRef50_Q1Q5X4 Conserved hypothetical electron transport protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5X4_9BACT Length = 343 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 192/349 (55%), Gaps = 20/349 (5%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++SSP+ + S IM V+L+ +P A ++ FG+ L I L ++AL+ E ++ Sbjct: 11 LIVSSSPHMRDNDSISHIMWTVVLSLLPAGFAAIFVFGYYVLFVIGLCCLTALVTEIVIS 70 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 ++KQ A +KD SA++T +LLA ++PP APW++ V+G+ FA+ + K +GGLG N +N Sbjct: 71 LMKKQPAFAMIKDGSAIVTAILLAYTLPPGAPWYVPVVGSFFAIAVVKHSFGGLGNNIWN 130 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ L +++PV + S + + SG +D Sbjct: 131 PALAARAFLQVAYPVSVNSDWRFFSDPGAMNVLKNITSTGESGLL------------LDA 178 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +++ATPL E Y + G + G + +A LAGG++LL++K I+W Sbjct: 179 VTRATPLA-------KESGAELYNFYQLLIGSVPGCIGETSAIALLAGGLYLLYKKCIKW 231 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLA-APQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 ++P+++L+T+ + ++ + A P HL +G LGAFF+ TD VT T +G L Sbjct: 232 YVPVAYLLTVFVVSIFLPPRTITPWANNPFYHLFAGGLFLGAFFMATDMVTTPLTKKGML 291 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 IF AGLL LIR + GYP+GV +++L+ N PLID +T+PR+YG + Sbjct: 292 IFSVGAGLLTILIRFYSGYPEGVCYSILIMNTATPLIDRFTKPRLYGSK 340 >UniRef50_B3EJT7 Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Chlorobiaceae RepID=B3EJT7_CHLPB Length = 331 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 185/341 (54%), Gaps = 29/341 (8%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 + +++++P+ ++ +M V LA P ++ FG LV ++ +S + E L Sbjct: 4 VNLKVSNAPFVRSKDSIESVMYNVALALAPATVMSVYLFGMRALVLTVVCILSCIAFEWL 63 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 + K R + + D SAL+TGLLLA+++P P WMVV G+ A++ K ++GGLG N Sbjct: 64 MDKARNKP--NSCLDGSALVTGLLLALNVPANLPLWMVVTGSFIAIVATKHVFGGLGYNV 121 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPA++ V LLISFP MTSW P + + + Sbjct: 122 FNPALVARVFLLISFPAAMTSWPMPAPF--------------------------SFDMMV 155 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D + A+PL KT ++ + + G + G+ + LA LAG VWL ++K I Sbjct: 156 DMETGASPLGILKTDGVQA-ALASLSLMDGFYGTMTGSLGETSALALLAGAVWLWYKKYI 214 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 +IPL+ + ++ L L L P T A+P H+++G +LGAFF+ TD VT+ + RG+ Sbjct: 215 TMYIPLTIMGSVFLFTGLFHLIDPGTYASPAFHMVTGGLILGAFFMATDMVTSPLSIRGQ 274 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 L+FG GLL +IR +GGYP+G++FA+L+ N VPLID + Sbjct: 275 LLFGLGCGLLTAVIRLWGGYPEGISFAILIMNSFVPLIDRW 315 >UniRef50_B8D8R7 Electron transport complex protein rnfD n=4 Tax=Buchnera aphidicola RepID=RNFD_BUCA5 Length = 347 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 142/343 (41%), Positives = 211/343 (61%) Query: 9 PYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQS 68 P ++ +IM LV++A +PGI A+ +FFG GTL+QI + +L+ E ++LK+R ++ Sbjct: 4 PCIYHVYSIRKIMFLVIVACLPGIFAKYYFFGIGTLIQIFFSIFISLVLEIIILKIRSKN 63 Query: 69 VAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGY 128 + L+D S +LT +L VSIPPL PWWM +G FA+++AK LYGG+GQN FNPAM+GY Sbjct: 64 IKNYLQDTSLVLTSVLFGVSIPPLLPWWMTSIGLFFAIVVAKHLYGGIGQNIFNPAMVGY 123 Query: 129 VVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATP 188 VLLISFPV M +W F + +IF + + + L + D + ATP Sbjct: 124 AVLLISFPVYMNNWNERDFSLSFFNDFKKSAYIIFFKNDITTVSSSYLNIIPDAFTTATP 183 Query: 189 LDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 L+ FK + W+ +N+++ GG++LL+ K I W IP+SF Sbjct: 184 LNNFKIKSHLKDDFFLKENIIKNKEVSIQTSWKCINISFFLGGIFLLFTKIICWRIPISF 243 Query: 249 LVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAG 308 L +L + +++ + +S E +PQ+H SG TM+ AFFI TDPVTA+ N G+++FG + G Sbjct: 244 LSSLGMLSIITYFYSKELFMSPQVHFFSGGTMICAFFIATDPVTAACNNVGKIVFGIIIG 303 Query: 309 LLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 LVW+IR++ YPD +AF+VL AN+TVPL+DYYT+ YG Sbjct: 304 FLVWIIRNYSDYPDAIAFSVLFANMTVPLVDYYTKSSGYGRNN 346 >UniRef50_B0PD31 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0PD31_9FIRM Length = 320 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 45/349 (12%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 I SP+ + T +IML V +A +P + A +WFFG L + V ++L E L Sbjct: 12 KLMITPSPHVKDGISTRKIMLTVSVALMPSLIAAIWFFGLRALALTAVCVVFSVLFEYLF 71 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ K+ T+ D SA++TG++L+ ++P P+WM G+ A+++ K L+GG+G N Sbjct: 72 NKVTKRE--QTIGDCSAVVTGIILSFNLPVTLPFWMAAFGSFMAIVVVKCLFGGIGCNFA 129 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA V LL+SF QMT+W+ P G+D Sbjct: 130 NPAATARVFLLVSFGGQMTTWVAP--------------------------------RGVD 157 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++ ATPL T + + G G+ + +A + GGV+L+W+ I Sbjct: 158 AMATATPLTLISTGQTDALP----SLWQMLIGQRGGSMGETCAIALIIGGVFLIWRGIIG 213 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP++ + ++ + A+L P +LSG M+ AFF+ TD T+ T +G++ Sbjct: 214 WEIPVTLIASIFVFALLFG-------QDPFYAILSGGVMIAAFFMATDYSTSPVTTKGKV 266 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +F G + +IRSF YP+G++FA+LL NI P ID T + +G Sbjct: 267 VFAIGIGFITMVIRSFCNYPEGMSFAILLMNILTPHIDSLTITKPFGAV 315 >UniRef50_Q3B3R3 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B3R3_PELLD Length = 324 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 115/341 (33%), Positives = 183/341 (53%), Gaps = 36/341 (10%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 + +++ +P+ ++ +M V LA +P A +++FG L+ L A +++ E + Sbjct: 4 LKLKVSYAPFVRSKDSIESVMYNVALALLPATALSVYYFGIPALLVTLTAIAASIAFEWM 63 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 ++R++ + D SA++TGLLLA+++P P WMVVLG A+++ K L+GGLG N Sbjct: 64 TDRIRRKP--DSCFDGSAVVTGLLLALNVPSGLPLWMVVLGAFVAIVVTKHLFGGLGFNI 121 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPA++ V LLISFPV MTSW P + Sbjct: 122 FNPALVARVFLLISFPVAMTSWPVPF--------------------------------AV 149 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D + A+PL KT + +++ G G+ + LA L G WL +++ I Sbjct: 150 DMQTAASPLGILKTDGLS--ALQGFSYMDALLGKTGGSLGETSALALLIGAAWLFYKRYI 207 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 IPL+F+ A+ + +L P T A P H+L+G +LGAFF+ TD VT+ + RG+ Sbjct: 208 TLTIPLTFIAVTAVFTGIFYLIDPSTYATPLFHILTGGLILGAFFMATDMVTSPMSMRGQ 267 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 L+F G+L +IR +GGYP+GV+FA+L+ N VPL+D + Sbjct: 268 LVFAGGCGILTAVIRLWGGYPEGVSFAILIMNSLVPLLDRW 308 >UniRef50_Q89AW7 Electron transport complex protein rnfD n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RNFD_BUCBP Length = 354 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 147/343 (42%), Positives = 218/343 (63%), Gaps = 2/343 (0%) Query: 11 THNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVA 70 ++ + TS IMLLV AAVPGI ++++FG+G L QILL+ ++ E LV +LRKQ+V Sbjct: 10 FYHHKNTSEIMLLVFCAAVPGICTEIYYFGFGVLFQILLSVFFSVSFEFLVKRLRKQTVK 69 Query: 71 ATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVV 130 + DNSA +TG+L+ +S+P L+PWW+ G F+++IAKQ+YGGLG N FNPAM GY + Sbjct: 70 SLFSDNSAAVTGVLIGISLPSLSPWWLSFFGAFFSIVIAKQIYGGLGNNIFNPAMTGYSI 129 Query: 131 LLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDM-NTLRLGIDGISQATPL 189 LL+SFP+ MT+W + N+ + VIF + + ++ I+QATPL Sbjct: 130 LLVSFPILMTNWSFQNSSYFNLFDLNNTFSVIFCTDINHYYSLIDEFQMMYKFITQATPL 189 Query: 190 DTFKTS-VRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 + +T + + ++ I ++ Y+ W +N+++L GG+ LL I W IP+S Sbjct: 190 EQIRTHVLDFNNKIDNIFEFVNYNYYFKNWKWISINISFLIGGIVLLGFNVICWRIPVSI 249 Query: 249 LVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAG 308 L +L + L + F +++ P + L G+TM FFI TDPVT S T GR++FG + G Sbjct: 250 LFSLYVFFALDYYFFKKSMYYPIMQLFFGSTMFSVFFIATDPVTTSITKIGRIVFGCIVG 309 Query: 309 LLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 L+WLIRSFG YPD +AF++LL+N VPLID+YT+PRVYG+ K Sbjct: 310 FLIWLIRSFGNYPDAIAFSILLSNSIVPLIDHYTQPRVYGYVK 352 >UniRef50_Q2LXU1 Sodium-translocating NADH-quinone reductase subunit B n=7 Tax=Bacteria RepID=Q2LXU1_SYNAS Length = 350 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 119/355 (33%), Positives = 190/355 (53%), Gaps = 29/355 (8%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++ SP+ ++ T++IM +V +P + ++ FG+ TL+ L++ +S +L EA+ Sbjct: 17 LTVSLSPHVKSRESTAKIMWMVNACLLPPLVLSVFIFGFQTLIITLISVLSCVLTEAVSQ 76 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KL + + T+KD SA++TGLLLA IPP P+WM +LG +FA+ I K L+GGLG N FN Sbjct: 77 KLLHRPI--TIKDGSAVITGLLLAYVIPPGVPYWMPILGAIFAIYITKHLFGGLGFNIFN 134 Query: 123 PAMIGYVVLLISFPVQMTS-WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 PA+IG L+ +FPV MTS W+ P + ++ G+D Sbjct: 135 PALIGRAFLVATFPVAMTSAWILPIQDFA---------------------IFKYMQPGVD 173 Query: 182 GISQATPLDTFK----TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQ 237 +S ATPL K ++ + + + G+ G + NL L GG +L+++ Sbjct: 174 AVSTATPLYVLKHYGLAALIEKYGTLSTVYKDFFLGVRPGCIGETSNLLLLLGGAFLIYK 233 Query: 238 KAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTN 297 + I WHIP+S + ++ L + P + +LSG LGA F+ TD VTA T Sbjct: 234 RYISWHIPVSTIASVGLLTWIFG-GEGYFNGDPILAVLSGGIFLGAIFMATDYVTAPTQK 292 Query: 298 RGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 +L+FG G + LIR GGYP+G+ +A+LL N P ++ + +P+ + KG Sbjct: 293 TAQLVFGIGVGAITVLIRLKGGYPEGICYAILLMNTLTPALESWFKPKRFAPAKG 347 >UniRef50_D2RN95 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RN95_ACIFE Length = 344 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 17/346 (4%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 ++SSP+ H S+ M V+LA VP + A +++F + I+ +SA++ E L K Sbjct: 12 LVSSSPHMHCGLTISKSMREVILALVPAVLASVYYFRVDAVRVIVCCVLSAIIFEKLANK 71 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + T+KD SA LTGLLLA+ +P P +M VLG +FAV+I K ++GGLG+N FNP Sbjct: 72 VMGVK-KDTVKDGSAALTGLLLALCLPASLPSYMAVLGGMFAVVIGKAIFGGLGKNIFNP 130 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A IG +LL SFP QMT+W+ P A + + + M Sbjct: 131 AHIGRAILLASFPQQMTTWVIPATKAAAVTAATAGADATTAATPLAVMRMTEKV------ 184 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 + + ++ G + G+ + A + GG++L+W+K I W Sbjct: 185 ----------WQAGGAAASQLPPLSDLFMGNVGGSLGETCVPALVLGGLYLIWKKLIDWR 234 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 IP+ +L T+A+ + P HL +G M+GAFF+ TD VT+ T +G++I+ Sbjct: 235 IPVFYLATVAVLTGIYGAVMGYPSTFPLYHLFAGGLMIGAFFMATDWVTSPITKKGKIIY 294 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G+L LIR G Y +GV +++L+ N+ P+ID + R +G Sbjct: 295 AIGLGVLTSLIRLRGSYTEGVCYSILMMNMVTPMIDRFVRNVSFGG 340 >UniRef50_C9XNL3 Electron transport complex protein n=9 Tax=Bacteria RepID=C9XNL3_CLODC Length = 325 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 33/351 (9%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + TS IM V++A +P A ++FF L + + + E L Sbjct: 4 KLIVSSSPHVRSNEDTSYIMKQVIIALLPAAVAGVYFFRLNALSAMFFCILGTVGTEFLY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K KQ +T+ D SA++TGLLLA ++P PWWM ++G +FA+++ K ++GG+G N Sbjct: 64 QKFTKQK--STIGDFSAVVTGLLLAFNVPASLPWWMCLVGGIFAILVVKMVFGGIGCNFV 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ LL SFPV MT+W P +N + +D Sbjct: 122 NPALAARAFLLASFPVAMTAWTQPG--------------------------VNWIGKNLD 155 Query: 182 GISQATPLDTFKTS--VRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 ++ ATPL K A S I + G + G + + L GGV+L+++ Sbjct: 156 AVTTATPLSFLKNGAAGLADLSSNGISLADMMIGNIGGCIGETSAILLLLGGVYLMYKGI 215 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I + IP+ ++ T+ + L F+ + L +G MLG FF+LTD T+ T +G Sbjct: 216 INYVIPVFYIATVFILTFLLGGFN---ITFAIYQLFAGGLMLGGFFMLTDYTTSPMTKKG 272 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++I+ LAGL+ +IR +GGYP+GV++++LL N PLID + R RV+G Sbjct: 273 QIIYAVLAGLITTVIRMYGGYPEGVSYSILLVNCLAPLIDKFVRNRVFGEV 323 >UniRef50_A6TQH0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TQH0_ALKMQ Length = 317 Score = 291 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 197/350 (56%), Gaps = 40/350 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + TS++ML V++A +P A +++F + LA ++A+LAEA+V Sbjct: 4 RLVVSSSPHILGEDTTSKMMLDVIIALLPATIAAMFYFRSSAAFIVALAIITAVLAEAVV 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+RKQ V T+KD SA++TGLLLA+++P APWW+ V+G+ FA+II KQ++GG+GQN Sbjct: 64 QKIRKQPV--TIKDLSAVVTGLLLALNLPASAPWWIPVVGSAFAIIIVKQIFGGIGQNFM 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ +++ IS+P QMT W+ P G+D Sbjct: 122 NPALAARIMMTISWPEQMTRWVAP---------------------------------GVD 148 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 +S ATPL K + + + + G +AG+ + + + GG++L+++ I Sbjct: 149 SVSAATPLSFVKDATAVPGNAPE--LMDMLFGNIAGSMGETSAILLVLGGLYLVYRGVIS 206 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IP ++ T+A+ +L F HLL G+ M+GAF++ TD + T +GR+ Sbjct: 207 IKIPAIYIGTVAVATLLYSGFD---FYFMTYHLLGGSLMIGAFYMATDYASGCVTPKGRM 263 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IF G+L +IR FGGYP+GV F++L+ N P ID +T P+VYG + Sbjct: 264 IFAFGCGVLTTVIRLFGGYPEGVGFSILIMNSMTPFIDRFTSPKVYGEVQ 313 >UniRef50_B5YE56 RnfD/nqrB n=3 Tax=Bacteria RepID=B5YE56_DICT6 Length = 318 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 190/350 (54%), Gaps = 39/350 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ TS M V+ A +P ++FFG +L+ I+++ +S++L EAL Sbjct: 7 KLIVSSSPHIFTHEDTSYAMKQVIFALLPATLGGIYFFGIYSLIVIIVSVISSVLWEALA 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L +R++ + LKD SA++TGLLLA+ +PP P W+ ++GT A+++AKQ++GG+G+N Sbjct: 67 LYIRRKPLTI-LKDYSAVVTGLLLALILPPNVPLWIPIIGTGVAILLAKQVFGGIGENFL 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G LL S+P MTSW+ P + Sbjct: 126 NPALVGRAFLLSSYPQIMTSWVKPINGLGFMSN--------------------------- 158 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 +S ATPL K + + ++ G AG + L L GG+WL+++ I Sbjct: 159 -VSTATPLAIEKLKLA---GYSLPSYWELFIGNRAGCIGETSVLLLLLGGLWLIYKNIID 214 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP+SF++T+ + + L P H+LSG LGAFF+ TD VT T++GRL Sbjct: 215 WKIPVSFILTVFIVSFLVG-------KDPIFHILSGGLFLGAFFMATDWVTTPLTSKGRL 267 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IFG AGL +IR +G YP+GV++ +L+ N PLID +PR +G K Sbjct: 268 IFGIGAGLFTIVIRFWGAYPEGVSYGILVMNALTPLIDNLVKPRRFGEVK 317 >UniRef50_Q73PG2 Na(+)-translocating NADH-quinone reductase, B subunit n=2 Tax=Treponema RepID=Q73PG2_TREDE Length = 338 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 29/347 (8%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 ++ +P+ +T +ML V++A +P A ++ F LV+I+++ + + E+L K+ Sbjct: 11 MSPAPHVVTPVKTQTLMLDVIIALLPLTAYGIYLFSIPALVRIIVSVLCCVGFESLFRKI 70 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 + + +KD SA++TGLLLA+ IPP P WM++LG FA+++AK+ +GGLG N FNPA Sbjct: 71 CRLDIR--VKDLSAVITGLLLALVIPPNLPIWMLILGCFFAIVVAKEFFGGLGANVFNPA 128 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G + SF MTSW+ P + +++I + + Sbjct: 129 LVGRAFMFASFSGAMTSWIQPGNSIFDAVSTATPLKLINAKEGIA--------------- 173 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 L + + S + + G AG + L L G +LL++K I W Sbjct: 174 ----LSASEIAKTLNLSSSTDLYTQLILGNHAGCIGETSILLILLGFAYLLFKKVIDWKT 229 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 P++ ++T + + + P + L SG GA F+ TD VT+ T +G+L+FG Sbjct: 230 PVTMMLTAVVITSIAGI-------NPILTLTSGGLAFGAVFMATDYVTSPVTPKGKLLFG 282 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 A GL+ LIR F G P+GV +++L+ N VP ++ P YG+ K Sbjct: 283 AGCGLITGLIRLFSGMPEGVMYSILIMNAVVPFLNKII-PVKYGYVK 328 >UniRef50_C3WYL8 Na(+)-translocating NADH-quinone reductase subunit B n=4 Tax=Fusobacterium RepID=C3WYL8_9FUSO Length = 315 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 166/352 (47%), Gaps = 48/352 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + + +P+ +M V++A +P A ++ FG L+ ++ + + E + Sbjct: 4 ILKTGPAPHIRTAETVESVMYDVVIALIPAFAMAVYSFGVRALILTAVSVATCIATEYIW 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K+ K+ + A D SA+LTG+L A +P V++G A+ + K +YGGLG N F Sbjct: 64 QKILKRDIEA--FDGSAILTGILFAFVVPVGMGLQYVIVGNFVAITLGKIVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+IG + S+PV +T++ D Sbjct: 122 NPALIGRAFVQASWPVAITTF------------------------------------AYD 145 Query: 182 GISQATPLDTFKTSVRAGHSV---EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 G + AT LD K + S+ + G + G + LA L GGV+L+++K Sbjct: 146 GKAGATVLDAMKRGIPLTDSLIYEGGNQYINAFLGQMGGCLGETSALALLIGGVYLIYKK 205 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 I W +P + T+ + A P + +LSG LGAFF+ TD VT+ T + Sbjct: 206 QIDWKVPAVMIGTVFVLTWAMG-------ANPFMQILSGGLFLGAFFMATDMVTSPITGK 258 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 GR+IF G+LV LIR GGYP+G A+A+L+ N VPLID Y R + +G Sbjct: 259 GRVIFALGIGILVSLIRIKGGYPEGTAYAILIMNGVVPLIDRYIRAKKFGGV 310 >UniRef50_A1WT47 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT47_HALHL Length = 338 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 180/350 (51%), Gaps = 18/350 (5%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 I +SP+ RIM V+LA +P A ++ FG +++++V+A+L E L Sbjct: 4 RIEIKTSPHIKAPDSVERIMRSVVLALLPVCAFSVYQFGISVAALLVVSTVTAVLTEQLF 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 ++ + +T+ D SA++TGLLLA+++PP P WM + A+ + K L+GGLG NPF Sbjct: 64 NRMSGRP--STIGDYSAVITGLLLALTLPPAFPLWMAAVSAFVAIALGKALFGGLGYNPF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G +FP ++W + F+ +D Sbjct: 122 NPALLGRAFAAAAFPEASSTWTQAGLSERFTEFLPSTLAAPFTTP-----------ASVD 170 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + ATPL +K + + +G +AG+ + L LA G++L+ + A+ Sbjct: 171 AYTTATPLAEWKFEGGIATET-----WDLLAGTIAGSAGETSALLVLACGLFLVLRGAVN 225 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W +P+S L + A A + + P T P L SGA MLGAFF+ +D ++ T G Sbjct: 226 WRVPVSVLGSAAATAGVFYALDPATYPDPLFVLASGALMLGAFFMASDMSSSPVTPAGIW 285 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+G L G L +IR FGG P+GV +A+LL N VPLI+ +PR+YG RK Sbjct: 286 IYGILIGFLTVIIRFFGGLPEGVMYAILLGNAAVPLIERIAQPRMYGLRK 335 >UniRef50_Q5P536 Electron transport complex protein rnfD (Nitrogen fixation protein rnfD) n=4 Tax=Bacteria RepID=Q5P536_AZOSE Length = 362 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 142/349 (40%), Positives = 190/349 (54%), Gaps = 19/349 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 +SP+ H +R M V LA +P W FGW + + + +L E + +L + Sbjct: 11 ASPHAHGGASIARTMRHVQLALLPATLFGFWLFGWPAVHLFAVTVGACVLTELVCQRLMR 70 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 V ++L D SALLTG LLA+S+PP AP W+ LG A+ I KQL+GGLGQN FNPAM+ Sbjct: 71 --VESSLGDGSALLTGWLLALSLPPWAPAWIGALGGFIAIAIGKQLFGGLGQNLFNPAMV 128 Query: 127 GYVVLLISFPVQMTSWLPPHEIAV-NIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQ 185 V LL+SFPV MT W+ P + P F + + + + D I+ Sbjct: 129 ARVALLVSFPVVMTQWVAPLPMTADGAPAFGEGLWITLASPPVP-----------DAIAS 177 Query: 186 ATPLDTFKTSVRAGHSV-----EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 A+ L KT + G V + G AG+ + + LAGG++LL I Sbjct: 178 ASLLGHAKTELSRGVDVLHAIGAATDPLFSWVGSRAGSLGETGAIFLLAGGLYLLATGVI 237 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RWHIPL+ L LA+ A +G P HLLSGA +LGAFFI TD VT+ T G+ Sbjct: 238 RWHIPLAVLAGLAIPAAIGHALDPAHYLPASAHLLSGAAILGAFFIATDYVTSPNTTFGQ 297 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 L+FG G L W+IRS+GGYP+G+AFAVLL N P+ID Y RPR+ G Sbjct: 298 LVFGFGIGFLTWIIRSWGGYPEGMAFAVLLLNALTPVIDRYCRPRILGR 346 >UniRef50_A5TRQ5 NADH dehydrogenase (Ubiquinone), RnfD subunit n=8 Tax=Fusobacterium RepID=A5TRQ5_FUSNP Length = 314 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 106/351 (30%), Positives = 173/351 (49%), Gaps = 47/351 (13%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + + +P+ +M V++A +P A ++ FG L+ ++ ++ +L E L Sbjct: 4 ILKTGPAPHIRTAETVESVMYDVIIALIPAFAMAVYTFGVRALILTAVSVLTCILTEYLC 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K K+ + A D SA+LTG+L A +P + P VV+G + A+ + K +YGGLG N F Sbjct: 64 QKALKRDIEA--FDGSAILTGILFAFVVPAIMPLQYVVVGNIVAITLGKMVYGGLGHNIF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + S+PV +T++ D Sbjct: 122 NPALVGRAFVQASWPVAITTF------------------------------------AFD 145 Query: 182 GISQATPLDTFKTSVRAGHSVEQIM--QYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 G + AT LD K + ++ + + G + G + +LA L GG +L+++K Sbjct: 146 GKAGATVLDAMKRGIPLSDALLENTNQYIDAFLGQMGGCLGETSSLALLLGGAYLIYKKH 205 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRG 299 I W +P + T+ + A P + + SG LGAFF+ TD VT+ TT++G Sbjct: 206 IDWKVPAVMIGTVFVLTWAMG-------ADPLMQIFSGGLFLGAFFMATDMVTSPTTSKG 258 Query: 300 RLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 R++F G+L+ LIR GGYP+G A+A+L+ N VPLID Y RP+ +G Sbjct: 259 RVVFALGLGILISLIRMKGGYPEGTAYAILIMNGVVPLIDRYIRPKKFGGV 309 >UniRef50_Q9EVN4 Electron transport complex protein rnfD n=20 Tax=Proteobacteria RepID=RNFD_PSEST Length = 354 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 195/342 (57%), Gaps = 18/342 (5%) Query: 14 QRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATL 73 + RIML V LA +P A L+ FGW + LL SA+ EA L L L Sbjct: 3 RSSVDRIMLHVCLALLPTTAWGLYLFGWPAIYLWLLTCASAVACEAACLYLLG-RPLRRL 61 Query: 74 KDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLI 133 D SALL+G LLA+++PP APWW+ V G++FA+ I KQLYGG+GQN FNPAM+ V LLI Sbjct: 62 LDGSALLSGWLLALTLPPWAPWWIAVGGSMFAIGIGKQLYGGVGQNVFNPAMLARVALLI 121 Query: 134 SFPVQMTSWLPPHEIAV-NIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 +FP+QMT+W P + PG+++ +++ F+G + DG+S AT L Sbjct: 122 AFPLQMTTWALPLPLGTEGAPGWLEGLRITFAGGALA-----------DGLSGATALGHL 170 Query: 193 KTSVRAGHSVEQIM-----QYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 +T + GHS QI+ P + G G+ + L L GG+WLL + I W IPL Sbjct: 171 QTELTLGHSAAQILDGHFALLPAFLGYSGGSLGETSELLILLGGLWLLALRIIHWEIPLG 230 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L+T+ A L P+ HL SG +LGA FI TDPVT+ + GRLIF Sbjct: 231 MLLTVGALAALANQIDPQVHGGGLFHLTSGGLLLGALFIATDPVTSPISRSGRLIFAIGC 290 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G LV++IRS+G +P+ VAFAVLL N VPLID RPR YG Sbjct: 291 GALVFVIRSWGNFPEAVAFAVLLMNALVPLIDRVCRPRAYGR 332 >UniRef50_A6NPN1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN1_9BACE Length = 414 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 174/352 (49%), Gaps = 38/352 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQ-LWFFGWGTLVQILLASVSALLAEALV 61 IAS+P+ + T +ML VL+A +P + +FFG + L+++ + EAL Sbjct: 94 LTIASAPHLTTRDTTRTLMLDVLIALMPALLFSGCYFFGPRAFLVTLVSAAGCVGFEALF 153 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + ++ T+ D SA++TG+LLA ++P P+W V+LG FA+++ KQL+GGLG+N Sbjct: 154 CLITRR--RQTVDDLSAVVTGVLLAFTLPANVPYWAVLLGDFFAIVVVKQLFGGLGKNFL 211 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ G L SFP M+++ + ID Sbjct: 212 NPALAGRAFL-FSFPAVMSAFPA---------------------------VRSWEGFAID 243 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 S ATP+ + S+ + +++G+ +G+ + L GG++LL ++ IR Sbjct: 244 AQSAATPMASLHAG-----SLPSVSLLEMFTGVRSGSLGEVSAALLLLGGLYLLARRVIR 298 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPLSFL T+A+ + +L L+ G +L AFF+ TD T+ T G++ Sbjct: 299 LRIPLSFLGTVAVLSWCFPQGGNSSLDWTLYSLMGGGLLLAAFFMATDFTTSPVTFWGQV 358 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDY--YTRPRVYGHRK 351 + G G L R+FG YP+GV FAVL+ N+ ID T V+ RK Sbjct: 359 VCGVGCGALTVFRRTFGSYPEGVGFAVLVMNLLAWPIDRAALTLRSVFRRRK 410 >UniRef50_A8ZSV3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV3_DESOH Length = 337 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 183/350 (52%), Gaps = 38/350 (10%) Query: 3 FRIASSPYTHNQR-QTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + A SP+ N+ T R+M VL+A +P + ++ FG + Q+++ VS L AEA+ Sbjct: 20 LQTAPSPHLSNESFTTRRMMADVLIALIPVVGMAVYVFGMFAVKQLVICLVSCLAAEAIF 79 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 ++RK+ + L D SA +TG++LA+S+P APW++ V+ + A+ I K ++GGLG N F Sbjct: 80 TRMRKRPIP--LGDGSAAITGVILALSLPGPAPWYVGVIASFVAIGIGKVIFGGLGMNIF 137 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPAM+G ++I+F M T +D Sbjct: 138 NPAMVGRAFVMIAFAGAMA-----------------------------ASGYMTAGGAVD 168 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 +SQATPL F+ + ++ G G+ + LA L GG +L ++ Sbjct: 169 AVSQATPLTLFQQEGVVT------PLFKLFIGTTNGSLGEGSALACLIGGAYLCIRRTAS 222 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP ++ + +CA+L L +P++ HL GA + GAF+I TDPVT+ T+ G+ Sbjct: 223 WEIPAGVILAVVVCAVLVSLANPDSEWTVLHHLFGGALLFGAFYIATDPVTSPLTSGGKF 282 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +FG G ++ L+R F GYP+GV FAVLL N PLI+ + P+ +G K Sbjct: 283 VFGLGVGAIIMLLRIFSGYPEGVMFAVLLMNAMTPLINRWMIPKPFGTVK 332 >UniRef50_C1QFU9 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Brachyspira RepID=C1QFU9_9SPIR Length = 361 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 113/357 (31%), Positives = 195/357 (54%), Gaps = 15/357 (4%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F SSP+ + T++IML V++A +P + + FG +V L A ++ +++ + Sbjct: 1 MKFYTESSPHIKDGDTTNKIMLRVIIALLPAVIYSIVLFGARVIVLYLAAIITCIVSTII 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 V K+RK+ + + D + +T +LL +++PP A MVV+G+V A++ AK+++GGLG N Sbjct: 61 VKKVRKKPL---IPDYAVTVTAILLVMTLPPSATITMVVIGSVIAIVFAKEVFGGLGSNI 117 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNPA++G L ++FP QMT + PP + F+ + I T + + + Sbjct: 118 FNPALVGRAFLQVAFPAQMTMYTPPKNVP-----FLGVFENILKDFTLTVSGASQSLDAV 172 Query: 181 DGISQATPLDTFKT-------SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVW 233 ++ ATPL K ++ + VE + G AGA + L L GG++ Sbjct: 173 SALTSATPLTFLKYNSIDFGGTLASQIQVESHYYLQMLLGSTAGAIGETSFLLLLIGGIF 232 Query: 234 LLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTA 293 LL I W IPL ++L + + L L P +A+P +L+G LGAFF+ TD VT+ Sbjct: 233 LLITNTIDWRIPLGMFISLVVVSFLLCLAMPGKVASPIYQVLAGGFGLGAFFMATDMVTS 292 Query: 294 STTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +++ G I+ L G ++ ++R+FG P+ + +++L+ N+ +PLI TRP +G + Sbjct: 293 PSSHLGAWIYALLIGAVLAILRTFGSSPEYMMYSILIGNMFMPLIAMLTRPLPFGKK 349 >UniRef50_D1VUL1 Electron transport complex protein RnfD n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL1_9FIRM Length = 330 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 99/349 (28%), Positives = 177/349 (50%), Gaps = 32/349 (9%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + ++ +P+ + +IML V++A VP I ++FFG +L I ++S++ +L E + Sbjct: 14 YFVSLAPHIRSNDTVRKIMLDVIIALVPAIIGSVYFFGMRSLFLICVSSLACVLTEYVTQ 73 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KL K+ + + D SA++TG+L+A ++P P + ++ G +FA++I K+ +GG+G N N Sbjct: 74 KLLKKPIQ--IGDLSAVVTGILIAFNVPITMPVFELIFGDIFAILIVKECFGGIGFNFMN 131 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ G +VL+ S+ +MT +L P + + +D Sbjct: 132 PALAGRLVLMASWTKRMTDYLSPEMVKNGVSSLSQ----------------------VDM 169 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +S ATPL + + + G + G + ++ L G ++L+ +K I Sbjct: 170 VSAATPLKLIGSGAYEKLP----SLFNMAIGNIGGVIGETSSILLLLGFLYLVIRKVISV 225 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP+ ++ A+ ++ + + +L+G +LGA F+ TD T T +GR+I Sbjct: 226 QIPVIYIGVCAITLVILGI----PINVIPYEILAGGLILGACFMATDYATNPITKKGRII 281 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F G L LIR P+GV++A+ L NI P+ID +TR + YG K Sbjct: 282 FAIGCGFLTALIRVKASLPEGVSYAICLMNICTPVIDKFTRTQAYGEVK 330 >UniRef50_C7GZP4 Na(+)-translocating NADH-quinone reductase, B subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP4_9FIRM Length = 325 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 173/339 (51%), Gaps = 36/339 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++++P+ TS+IM +V+L+ VP ++ FG LV IL +++ L E + Sbjct: 8 LMMSTAPHIVTDTDTSKIMKMVILSLVPAGLVGVYVFGLKALVLILTCMIASTLFEYIYN 67 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 KL K+ T D SA LTG+L+A ++P P M ++G A+II KQLYGG+GQN N Sbjct: 68 KLMKKE--QTAWDCSAALTGMLIAYNVPSSLPIPMAIVGCFVAIIIVKQLYGGIGQNLVN 125 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ +VL+ SF QMTSW P + ++ D Sbjct: 126 PAITARIVLMTSFATQMTSWPVPRGSKGF----------------------SFMQGFTDT 163 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + ATPL ++ G + G+ + LA LAGG +LLW++ I W Sbjct: 164 TTAATPLGVLAEGGD-----YMPSNMQLFLGNVGGSLGEVSALALLAGGAFLLWKRIITW 218 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 HIP++++VT+ ++L P HL +G MLGA F+ TD VT+ T G++I Sbjct: 219 HIPVAYMVTVVAISLLLG-------QDPIFHLCAGGVMLGAIFMATDYVTSPTIVSGKII 271 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 FG A L+ +IR +G P+GV+F +LL NI P +D Sbjct: 272 FGVGAALIAMVIRLYGQMPEGVSFGILLMNILTPHVDKL 310 >UniRef50_B2A143 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A143_NATTJ Length = 315 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 109/350 (31%), Positives = 172/350 (49%), Gaps = 41/350 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 ++SSP+ + IM VL+A +P +W FGW +++ + +A+ +++ E+L+ Sbjct: 4 KLVVSSSPHLRSPETIDSIMRDVLIALIPPFIVSIWLFGWTSIIVVAVATAVSMITESLI 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + D SA +TG++ +S+PP PWW+V G A+ IAKQ++GG+G N F Sbjct: 64 VHKSLAPRKLK-GDLSAAVTGVIFGLSLPPGTPWWVVASGAFVAIFIAKQIFGGIGYNIF 122 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G +++++P +T W P +D Sbjct: 123 NPALVGRAFVVVAWPSYLTHWTEPF-------------------------------EPVD 151 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 S+ATPL + G E + ++ G +AG+ + LA GG++LL + I Sbjct: 152 AASRATPLAF--PGMTEGSPFEIVPFTDLFVGTIAGSLGETSALAITIGGIFLLIRGHID 209 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 + +PL FL LAL + HL+SG+ GA FI T VT+ T G+L Sbjct: 210 FRVPLGFLGALALVVSIAG-------ENALFHLVSGSAFFGAIFIATCMVTSPYTKTGKL 262 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 IFG G + ++R + P GV +AVLL N VP I+ YT+PRVYG Sbjct: 263 IFGIGCGAITAILRMYAAIPAGVTYAVLLMNALVPFINVYTKPRVYGEVN 312 >UniRef50_UPI0001C35E54 electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35E54 Length = 307 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 175/348 (50%), Gaps = 47/348 (13%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++SSP+ +Q TS IML V +A +P A ++ FG + IL +S +L+E + Sbjct: 5 LNVSSSPHVRDQVTTSNIMLDVAIAMIPATAYGVYQFGIKAALVILATVLSCVLSEYVYE 64 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 L + V T+ D SAL+TG++LA+++PP P W+ VLG +FA+I+ KQLYGGLGQN N Sbjct: 65 TLMGKPV--TISDGSALVTGMILALNMPPGIPLWIPVLGGIFAIIVVKQLYGGLGQNFMN 122 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA+ LLI+F +MT++ D Sbjct: 123 PALAARCFLLIAFAGKMTTFT-----------------------------------YNDV 147 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + TPL K ++ G + G + +A L G +LL +K I Sbjct: 148 VVSPTPLAALKAGQAVDIPA-------MFIGKIPGTIGEVSVIALLIGAAYLLIKKVITI 200 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP ++L+T A+ + HL G + GAFF+ TD VT+ T +G+++ Sbjct: 201 RIPAAYLITFAVFVFIFGQQD---FTYVLAHLCGGGIIFGAFFMATDYVTSPITPKGQIL 257 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 FG L G+L L R FGG +GV++A++++NI VPLI+ T P+ +G Sbjct: 258 FGILLGVLTGLFRLFGGSAEGVSYAIIISNILVPLIEKITLPKAFGKE 305 >UniRef50_A1WTR8 Electron transport complex protein rnfD n=2 Tax=Proteobacteria RepID=RNFD_HALHL Length = 357 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 139/351 (39%), Positives = 205/351 (58%), Gaps = 17/351 (4%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 + P+T +M VLLAA P A +W +GW L +L+ V+ L+AEA L+ Sbjct: 6 AGPHTRAPLSLPTLMRQVLLAAAPATAFGVWLYGWPALNLLLITLVTVLVAEAACLRAAG 65 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + V + L D+SAL+ G +LA+S+PP APWW+ V+G + AV++ K ++GG GQN FNPAM+ Sbjct: 66 RPVRSGLGDSSALVAGWILAMSLPPWAPWWIGVIGGLLAVVLGKGVFGGTGQNLFNPAMV 125 Query: 127 GYVVLLISFPVQMTSWLPPHEIA-VNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQ 185 V LLI+FPV+MT W+ P + PGF++++ + F+G D ++ Sbjct: 126 ARVALLIAFPVEMTRWVEPAPLGSAVAPGFLESLGITFTGTAD-----------WDAVTG 174 Query: 186 ATPLDTFKTSVRAGHSVEQ-----IMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 AT LD +T+V G S+E G G+ + L GGV+L++++ I Sbjct: 175 ATTLDATRTAVTEGQSIETALPEAYQPALALLGYAPGSLAEGSALLLALGGVYLIYRRVI 234 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W IP L TLA+ A + P A +H+L+G+T+L AFFI TDP T+ TT GR Sbjct: 235 AWEIPAVMLATLAVLATVFHTLDPTRYADAGVHILAGSTLLAAFFIATDPTTSPTTTVGR 294 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +F A ++VW++R++GGYP+ AFAVLL N PLID++ RPRVYG + Sbjct: 295 AVFAAGCAVIVWVVRTYGGYPEATAFAVLLMNAFTPLIDHWIRPRVYGRTR 345 >UniRef50_C7H9I4 Na-translocating NADH-quinone reductase, Nqr2 subunit n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9I4_9FIRM Length = 319 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 106/350 (30%), Positives = 180/350 (51%), Gaps = 45/350 (12%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 +++SP+ ++ T +M V++A P + A FG L+ ++ V+ + E L Sbjct: 4 KLIVSASPHLRSEETTQSLMANVIVALCPCVVASAIIFGARALLVTAVSVVACVAFEWLY 63 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KL K+ A + D SA++TG++LA+++P P +++G + A+I+ KQL+GG+G N Sbjct: 64 CKLLKK--ANPISDLSAVVTGIILAMNVPVGMPIGQLIIGDLVAIIVVKQLFGGIGMNFA 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G +VL ISF M +W+ P +D Sbjct: 122 NPALVGRIVLFISFAGSMNNWVFPDA-------------------------------AVD 150 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 +S ATPL TS ++ ++ G+ G + LA L G ++++ K I Sbjct: 151 QLSSATPLAVADTS--------KLSLLDLFMGVHGGVLGETCALAILLGLIYMVATKTIS 202 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IP S++ ++ + +L S +L + +LSG M GA F+ TD VT+ T +G+L Sbjct: 203 IAIPASYIGSMF----IFYLISTGSLHGALVGILSGGLMFGAVFMATDYVTSPFTLKGKL 258 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+G G++ + IR +G Y +GV+FA+L N+ VP I+ +TR YG+ K Sbjct: 259 IYGLCLGIVTFAIRQWGSYAEGVSFALLFMNLWVPFINDWTRQTPYGYVK 308 >UniRef50_A7C2T7 Electron transport complex, NQR2 and RnfD n=2 Tax=Beggiatoa RepID=A7C2T7_9GAMM Length = 336 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 183/348 (52%), Gaps = 22/348 (6%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + +SP+ T +ML V+ A +P A LWFFG L+ +L + L E Sbjct: 7 KLVVQASPFLKQGLTTQNVMLDVIYALIPVTLASLWFFGMSALMVLLASIAGTLFTEWFF 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 + A +LKD SA LTGLLL +++PP P WM LG V A+ + K ++GGLG N F Sbjct: 67 S--SSPNRAESLKDGSAFLTGLLLGLTLPPSLPLWMAFLGGVVAIGLGKIVWGGLGNNLF 124 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G LL +FP MT+W A + + G+D Sbjct: 125 NPALVGRAFLLANFPNAMTTWT--------------AQSTSLFELHPHNLSLPLFQTGVD 170 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++ ATPL K + + G +G+ + L L GG++L+ +++I Sbjct: 171 AVTSATPLGLMKFQQ------QDTPLLDLIIGTTSGSFGETGGLLILLGGIYLILRRSID 224 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP + L ++ + + + ++F P + SG +LG FF+ +DPVT+ T +G Sbjct: 225 WRIPAAILGSVIIFSGILFMFDATRYPDPFFAVFSGGLLLGTFFMASDPVTSPLTPKGAW 284 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 IFG G++V LIR+FGG+P+GV +A+LL N TVPLI+ YT+PRV+GH Sbjct: 285 IFGIGIGVIVVLIRNFGGFPEGVMYAILLMNATVPLIERYTQPRVFGH 332 >UniRef50_C6L9Q2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9Q2_9FIRM Length = 497 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 116/332 (34%), Positives = 174/332 (52%), Gaps = 47/332 (14%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M V LA +P A ++ FG L + ++ ALL+E + KL Q V T+ D SAL+ Sbjct: 1 MYNVALALLPATAFGVYRFGLYALAIVAVSVAFALLSEYVFQKLAGQKV--TVSDGSALV 58 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TGLLL +++PP P W+ LG++FAVI KQ +GG+GQN NPA+ LLISF M+ Sbjct: 59 TGLLLGLNLPPTVPLWIPALGSIFAVIFVKQFFGGIGQNFMNPALGARCFLLISFTGIMS 118 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 + +DGIS ATPL Sbjct: 119 DY------------------------------------AVDGISGATPLAALAEG----- 137 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 +Q+ ++ G G + LA L GG++LL +K I W IP+ +LV+ A+ ++ Sbjct: 138 --QQVNLAQLFIGFTGGCIGEISTLAILIGGIYLLLKKIITWEIPVCYLVSFAIFELIFG 195 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 S T L SG MLGAFF+ TD VT+ T +G++++G L G+L ++R+FG Sbjct: 196 KGSGITF--VLAQLCSGGLMLGAFFMATDYVTSPITKKGKIVYGILLGVLTGVLRTFGAL 253 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 P+GV++A++++N+ VPLI+ T P +G+ G Sbjct: 254 PEGVSYAIIISNLLVPLIEKVTMPTAFGYENG 285 >UniRef50_C8WMP8 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Bacteria RepID=C8WMP8_EGGLE Length = 327 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 103/349 (29%), Positives = 168/349 (48%), Gaps = 43/349 (12%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 +++ P+ + T ++ML V++A VP + A FGW L+ + + + +L E L Sbjct: 9 LVLSTPPHVFDGITTQKVMLNVVIALVPTLIASFVIFGWRALLVTAVTTAACVLFEYLWC 68 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 LRK T D SA++TGLLLA ++P P +M V+G+ A+++ K+L+GG+G+N N Sbjct: 69 LLRKTP--QTAGDLSAVVTGLLLAFNLPSTIPLYMAVIGSFVAIVVVKELFGGIGRNFAN 126 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PA++ +VL +SF MT++ P G+D Sbjct: 127 PAIVARIVLSVSFTAAMTNYAAPQGFLPGA-------------------------TGVDA 161 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 +S ATPL Q+ + G+ G + +A L G WLL + + + Sbjct: 162 VSSATPLA---------PGAAQLPFMDLLFGVHPGVLGETCGIAILLGFAWLLVTRTVTF 212 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IP ++ T+ +C++L + SG +L A F+ TD T+ TT +G++I Sbjct: 213 TIPGVYVGTVIVCSLLTG-------HDVATQVFSGGLLLCAVFMATDYTTSPTTFKGQVI 265 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 F GL+ LIR +G +G A+++LL N+ VP ID T G K Sbjct: 266 FAVGLGLITCLIRFWGNMNEGAAYSILLMNLVVPYIDSLTATTPLGGEK 314 >UniRef50_C1D7J0 Electron transport complex, NQR2 and RnfD n=3 Tax=Proteobacteria RepID=C1D7J0_LARHH Length = 347 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 113/349 (32%), Positives = 173/349 (49%), Gaps = 14/349 (4%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + SSP+ T +IM V+ A +P +W FG + +L +S +L E L+ Sbjct: 7 RLYLHSSPHLVTGHDTPKIMRHVVYALLPVTLWAIWQFGTSAFLLVLTVVLSCVLTERLI 66 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L+ A +D SA++TGL LA+++PP P WM + + A+ + K L+GGLG N F Sbjct: 67 LR-----HPAAPRDMSAVITGLTLALTLPPALPLWMGAVAGIVAIALGKLLFGGLGSNVF 121 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA++G + SFP MT+W P + + F+ +D Sbjct: 122 NPALVGRAFVQASFPAAMTTWTPAGAAGRFTELIPSTLALPFTSPDPVAAWAAAR---LD 178 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 G + ATPL +K + + S ++G+ + L +A G++L + + Sbjct: 179 GFAGATPLAAWKFAGELPGQGHF-----LLSPGVSGSLGETSALLIVACGLYLAVRGMLN 233 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IPL+ L+ AL + F P+ L SG M GA+F+ TD VTA T RG Sbjct: 234 WRIPLAVLLGAALVSTAFGPF-PDIGNGVLFVLTSGGLMFGAWFMATDMVTAPITRRGMW 292 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++G L G L+ IR +GG +GV +A+LLAN VP I+ T+PR YG + Sbjct: 293 VYGLLIGALIVTIRFWGGASEGVMYAILLANALVPHIEALTQPRHYGRK 341 >UniRef50_Q3SHB5 Electron transport complex, RnfABCDGE type, D subunit n=7 Tax=Betaproteobacteria RepID=Q3SHB5_THIDA Length = 342 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 157/345 (45%), Positives = 224/345 (64%), Gaps = 9/345 (2%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 SPY ++ + +M VL A +PGI +W FG G L+ + +A+V+A+ AEA +LK R Sbjct: 2 PSPYILDRTSVTVVMAWVLAALLPGIGVYVWLFGPGILLTLSIATVTAVAAEAGMLKARG 61 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + L D SA++T LLA+S+P LAPWW++V GT+FA+++AK LYGGLGQN FNPAM+ Sbjct: 62 YPIKPFLGDLSAVVTAWLLALSLPSLAPWWLIVTGTLFAIVVAKHLYGGLGQNVFNPAMV 121 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 GY VL++SFPVQMT W P E+ G + +IF +D ++ A Sbjct: 122 GYAVLIVSFPVQMTQWAGPLELTATPLGIGQSAAIIFGADVPKSL--------LDAVTMA 173 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 TPLDT +T + H+V+++++ PI+ G L G G++W+ A+L GG+ L + I W +PL Sbjct: 174 TPLDTLRTGLLQQHTVDEVVRQPIF-GYLGGTGFEWLAAAFLLGGLLLWALRIISWQVPL 232 Query: 247 SFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL 306 +FLV + L A F AP H+ + + MLGAFFI TDPV+ +TT RG+++FG Sbjct: 233 AFLVGVWLTAGFLHFFDAGRFGAPWFHVFAPSVMLGAFFIATDPVSGATTPRGKVVFGLG 292 Query: 307 AGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 AG L +IR++GG+PDGVAFA+LL N+ VPLID YT+PRVYG + Sbjct: 293 AGFLTIVIRTWGGFPDGVAFAILLMNLCVPLIDQYTQPRVYGEVR 337 >UniRef50_B6BWH4 Na-translocating NADH-quinone reductase, Nqr2 subunit n=2 Tax=Betaproteobacteria RepID=B6BWH4_9PROT Length = 332 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 132/343 (38%), Positives = 202/343 (58%), Gaps = 16/343 (4%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 SP + + IM V+L +P + Q+ FFG+ L + AL EA+ LKLR Sbjct: 6 SPAIKERSTVNMIMFTVILGLLPALFLQIGFFGYQILGNLFFGIGFALFLEAVCLKLRNY 65 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 + + D SA +T LL +S+P P W +++G F++++AK YGG+G NPFNPAMIG Sbjct: 66 PIRPFILDGSAFVTAWLLIISVPANIPIWTLLIGIFFSIVVAKHAYGGIGSNPFNPAMIG 125 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 Y VLLISFP MT+W D ++ + ++ + D I AT Sbjct: 126 YAVLLISFPKIMTNWPI-----------SDGFEIRNFIQFSQFFSISNINEAYDAIVSAT 174 Query: 188 PLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 PLD KTS+ G V+ + + +Q + + + GG++L+++K I WH+PLS Sbjct: 175 PLDQIKTSLFLGKEVDVLPIS-----FSTLSSYQMIAILYFLGGLFLVYKKVITWHLPLS 229 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 ++++ + + L L+ T +P HLL+GAT L AFFI+TDPV++ TT +G++IFG L Sbjct: 230 LILSVYIFSGLLHLYDQNTYMSPTFHLLNGATFLAAFFIITDPVSSPTTLKGKIIFGILI 289 Query: 308 GLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 GL+ +IR++GGYPDG+AFAV+ NI VPLI+ +T+P+V+G+ Sbjct: 290 GLITVIIRNYGGYPDGIAFAVIFMNICVPLIEKFTQPKVFGYE 332 >UniRef50_B9Y6Y9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Y9_9FIRM Length = 459 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 153/366 (41%), Gaps = 55/366 (15%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFF--------GWGTLVQILLASV 52 M F SP + + T RIM + L + A L+++ G ++ ++ A V Sbjct: 1 MKFNFKPSPNYRDGQSTGRIMGELTLGLLAVFAFSLYYYFTNFSASYGLRAILLMITAIV 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 SA E L K+ + +LK++ +T ++L + P ++ + + TV A+ K + Sbjct: 61 SACGTEILWCVFTKKDILNSLKNSYPWVTAIILTMMCPLSIEYYALAVATVIAIFFGKLV 120 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGD 172 +GG GQN FNPA +G + Sbjct: 121 FGGFGQNIFNPAAVGRA---------------------------------------TIFA 141 Query: 173 MNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIM--------QYPIYSGILAGAGWQWVN 224 D ++ ATP + +S E + ++ G+ GA + Sbjct: 142 SFAGAAAADIVTGATPTSSMAAQNWIINSAEGMSSFLKPFGGLGNMFVGLYPGAIGETSA 201 Query: 225 LAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAF 284 L L GV L +K I W +P ++L+TL + A L ++ HLL+G M GA Sbjct: 202 LVILVVGVILAIRKVIDWRVPATYLITLFVLAAGVGLMHGAPISYALFHLLTGGAMFGAV 261 Query: 285 FILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRP 344 F++TDPVT T+ GR++F ++ ++R P+GV +++L+ N+ PLI+ T Sbjct: 262 FMMTDPVTNPTSAAGRIMFAVGCAVITIVLRLRSNLPEGVMYSILIMNMLTPLIESLTDG 321 Query: 345 RVYGHR 350 + + Sbjct: 322 QQIKMK 327 >UniRef50_C4Z023 Electron transport complex protein RnfD n=38 Tax=Bacteria RepID=C4Z023_EUBE2 Length = 304 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 100/328 (30%), Positives = 159/328 (48%), Gaps = 36/328 (10%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M VL+A P + FG L++I++ V+ + EAL + V T+ D SA + Sbjct: 1 MRDVLIALTPASIFGIVNFGLDALLRIVIGIVTCVACEALYQYFMHKKV--TVTDLSAAV 58 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TGLL+A++IP ++G VFA+I+ KQL+GGLGQN NPA+ LLI++ MT Sbjct: 59 TGLLIALNIPSTLNVGFEIVGCVFAIIVVKQLFGGLGQNFMNPALAARCFLLIAYTGPMT 118 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 +++ T +D S ATPL K + Sbjct: 119 NFV-------------------------------TSNGFLDAYSGATPLALLKPGAESTG 147 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 V ++ G G + + L GG++LL +K I W IP++++ A+ L Sbjct: 148 VV---SLAKMFIGTTGGVIGETSAICLLLGGIYLLARKVINWRIPVTYVGVFAVLIFLFA 204 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 + + G +LGA F+ TD VT+ T G+++FG GLL ++ R +GG Sbjct: 205 PGHHFDVIYMLEEVCGGGLLLGAIFMATDYVTSPITPNGKIVFGCCLGLLTFIFRMYGGS 264 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYG 348 +GV++A++ N+ VPLI+ T P+ +G Sbjct: 265 AEGVSYAIIFCNLLVPLIERVTVPKSFG 292 >UniRef50_D1U4Y0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4Y0_9DELT Length = 334 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 165/348 (47%), Gaps = 40/348 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++ +P+ H R M L+A +P FFG + + +A A+ EAL Sbjct: 8 ILTVSMAPHVHCGRTIKGHMRETLIALLPATIMAAVFFGLDAVRVMAMACAVAVATEALC 67 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L ++ + + D SALLTGLL A +P APWW+ +G ++ + K ++GGLG +P Sbjct: 68 NTLSRRDL--AVDDLSALLTGLLFAFLLPASAPWWLAAVGAAASIGLGKFIFGGLGASPL 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 P ++G+ + IS+P M + + Sbjct: 126 CPPLVGWALCRISWPEIMDT-----------------------------------NASML 150 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + A PL K +V I +++G G A LAGG +LL + I Sbjct: 151 ASTLAAPLHELKHFGL--DAVTAIDPVSLFTGHQLGGLGAVHVAALLAGGAFLLVRHHIP 208 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP +F+ L A + L P A P HLL+G + GAFF+ TDP ++ RL Sbjct: 209 WEIPAAFIAGLLATAWVYRLMDPTAYAPPLFHLLAGGAVFGAFFLATDPASSPVGRIPRL 268 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 +FG +AG++V +IR +G YPDGV FA+LLAN+ PL+D RPR +G Sbjct: 269 LFGLVAGIMVIIIRVYGIYPDGVPFAILLANLFTPLLDR-IRPRPFGG 315 >UniRef50_C9A8K0 RnfD protein n=3 Tax=Enterococcus casseliflavus RepID=C9A8K0_ENTCA Length = 356 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 161/347 (46%), Gaps = 26/347 (7%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 SP+ + +T +IM V+LA +P + + FG +A +A A+ + L K Sbjct: 24 PSPHIRSNDETVKIMGCVVLALLPAVLFSGYLFGLKVYGLFFIALATAFAADGIWSYLIK 83 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + D S ++T LLL +++PP APW+ V+G FAVII K+ +GG+G N NPA+ Sbjct: 84 RPFR---FDLSIVVTALLLTMNLPPTAPWYFPVIGVAFAVIIVKEFFGGIGYNFLNPALG 140 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 G +L+ F QM P +I D+ + D +S A Sbjct: 141 GRALLIGLFYNQMFLISWPDPPFGSI-----------------APDVVSQATANDVVSGA 183 Query: 187 TPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPL 246 TPL K G ++ + G G + L L GG++L+++K I IPL Sbjct: 184 TPLAVMKA----GDTLSGSDLLDAFLGFTGGRIGETSALLLLLGGIFLVYKKIISPRIPL 239 Query: 247 SFLVTLALCAMLGWL--FSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 T+ L A + + H++SG MLGA ++ TD + T G +F Sbjct: 240 IIFATIGLFAFILGPEGLFTGSWQTVIGHIISGGAMLGAIYMATDYSSTPGTKAGENLFA 299 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 GLLV L R FG +G+++A+L+ N PLID + R R+ G K Sbjct: 300 LGVGLLVVLFRFFGFTNEGMSYAILIMNCFTPLIDRFLRLRILGEGK 346 >UniRef50_C6BWF3 NADH:ubiquinone oxidoreductase, subunit B n=2 Tax=Deltaproteobacteria RepID=C6BWF3_DESAD Length = 399 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 91/393 (23%), Positives = 156/393 (39%), Gaps = 86/393 (21%) Query: 6 ASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT---------------------- 43 + SP+ + R+M+ V+ A +P +W G+ Sbjct: 40 SGSPHVRDAIDLKRVMITVVFALIPCFYMAMWNTGYQANAALASMGLEAGTGWRWSVMSG 99 Query: 44 ---------------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTG 82 ++ +++ E L +RK + + L+TG Sbjct: 100 LGLSANPESFGANIMLGALYFFPIYIVCNIAGGFWETLFAVIRKHEI-----NEGFLVTG 154 Query: 83 LLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSW 142 L+ + +PP P W V L T F V+I K+++GG G+N NPA++ L ++P ++ Sbjct: 155 SLIPLIVPPHIPLWQVALATSFGVVIGKEIFGGTGKNILNPALLARAFLFFAYPAHISG- 213 Query: 143 LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSV 202 N++ + +DG S ATPL V Sbjct: 214 -------------------------------NSVWVPVDGFSGATPLA-LAAEGGINAVV 241 Query: 203 EQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLF 262 + + + G + G+ + LA L GGV L++ W I +S L A++ Sbjct: 242 AKYSWWDCFIGTIPGSLGETSTLACLIGGVVLVFTGIASWRIMVSLLGGAFAVAIIFNAV 301 Query: 263 SPETLA----APQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG 318 S + +P HL+ G G ++ TDPV++S T++G+ +GAL G+++ LIR+ Sbjct: 302 SSGSNPMMTVSPLWHLVMGGLAFGMVYMATDPVSSSMTHKGQFYYGALIGIMIVLIRTVN 361 Query: 319 -GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 YP+GV A+L N+ P ID R Sbjct: 362 PAYPEGVMLAILFGNVCAPFIDNLVMRANIKRR 394 >UniRef50_A5CXQ4 Electron transport complex protein RnfD n=2 Tax=sulfur-oxidizing symbionts RepID=A5CXQ4_VESOH Length = 314 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 150/333 (45%), Positives = 218/333 (65%), Gaps = 26/333 (7%) Query: 16 QTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKD 75 TS +M V+ A GI +FFGWG ++QI+L ++A+ E+ L R + + +++ D Sbjct: 7 STSWMMRQVIYALALGIVVSYYFFGWGIVLQIVLGVITAVAVESAFLAFRGRDIISSISD 66 Query: 76 NSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISF 135 S +LT +LLA+SIP +APWW++++G FA+I KQLYGGLG N FNPAM+GYV LLIS+ Sbjct: 67 GSIILTAILLAISIPNIAPWWVIIVGISFAIIFGKQLYGGLGNNLFNPAMLGYVFLLISY 126 Query: 136 PVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTS 195 P+QM++W N F A++V+F+ ID IS AT LD K S Sbjct: 127 PLQMSTWPI------NFLSFDQALEVVFN------------LSNIDAISGATRLDEIKNS 168 Query: 196 VRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALC 255 + +S++Q+ + W+N+ + GG++LL++K I WHIP+SFLV + + Sbjct: 169 LSLSNSIKQLEIHF--------PSQVWINVGFFFGGLYLLFRKIISWHIPVSFLVGIVIT 220 Query: 256 AMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIR 315 ++L W+ + + Q H++ G TMLGAFFI TDPV+ASTT GR+I+G L G+L+ +IR Sbjct: 221 SVLLWISNVDLYIPMQNHIMLGGTMLGAFFIATDPVSASTTINGRIIYGFLIGVLIVIIR 280 Query: 316 SFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 +FGGYPDG+AFAVLL N+TVPLID YT+P+V+G Sbjct: 281 TFGGYPDGIAFAVLLMNMTVPLIDVYTQPKVFG 313 >UniRef50_B2A1V3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1V3_NATTJ Length = 330 Score = 260 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 169/348 (48%), Gaps = 40/348 (11%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + SSP+ +++ S M V++A +P + ++F+ + I + ++A+L E +V Sbjct: 5 RLVVDSSPHLRSKKTVSVAMFDVMIALIPIVLVSIYFYQQHAIFTIAVCMITAVLTELIV 64 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 KL + TL D SALLTGL +A+ W +L TV A+ +AK+ GGLG N F Sbjct: 65 RKLTNR--QPTLNDGSALLTGLFVALLFSGTVAVWTAILATVLAIGVAKEFVGGLGWNLF 122 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA+ G +++I P +F D+ +D Sbjct: 123 NPAIFGRSMIIILSP-------------------------LFLWLNDLFADIYVDLGPVD 157 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 ++QATPL + +E + + GA + LA L GG++LL++ I Sbjct: 158 VMTQATPLAMLQ------GGMEMPSYWEMLVAFPGGALSETSPLALLIGGIYLLYRGHIN 211 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 W IP+S + T+ + +++ A P +LSG M+GAFF+ TD VT+ N+G++ Sbjct: 212 WRIPVSVIGTVVVLSLIAG-------ADPMYQVLSGGIMIGAFFMATDWVTSPINNKGKI 264 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 IFG G L L R G +GVAF++L+ N VPLID T+ + Sbjct: 265 IFGIAIGALTILFRLGLGATEGVAFSILIMNAFVPLIDKKTKHPSFSE 312 >UniRef50_C4FA61 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FA61_9ACTN Length = 310 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 45/351 (12%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M +SP+ H + T IM +V L+ +P + A ++ +G G + +L+ +AL+ E + Sbjct: 1 MNLINEASPHFHGKGSTQWIMGMVCLSLLPTLVASVFLYGLGAPLLVLVCVATALVTEHV 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 +L + +T D S ++T +L A ++P ++ +LGTVFA+ + K L+GG+G N Sbjct: 61 CCRLMNRE--STAGDLSCVVTAMLFAFTLPANCGYFPAILGTVFAIAVVKMLFGGIGCNF 118 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 NPA+ V ++++ P+ + ++ + + + Sbjct: 119 ANPAVTARVFIMLAMPIALGAYP------------------------------DIMGRPL 148 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D I+ ATPL + G+ AGA + + LAG V+LL + + Sbjct: 149 DAITGATPLAMNAAGDAP------YSYMDMMFGLHAGALGETCIITLLAGYVFLLVMRVV 202 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 + F+ T+A+ +LSG LGAF++ TD T T +G+ Sbjct: 203 DAWATVPFIATVAVITGFAG-------QDAIYQVLSGGLALGAFYMATDYTTTPMTPKGK 255 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 +IFG G++ L+R F P+GVAF++L N+ PLID YTRP+ G K Sbjct: 256 IIFGIGCGVITALVRLFAAAPEGVAFSILFMNMFTPLIDRYTRPQPAGGVK 306 >UniRef50_A1ZH15 NADH:ubiquinone oxidoreductase, na(+)-translocating, b subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZH15_9SPHI Length = 456 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 147/404 (36%), Gaps = 69/404 (17%) Query: 11 THNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---------------------TLVQILL 49 + R+M+ V++A VP + +W G L +++ Sbjct: 49 VRDAIDMKRLMITVVVAMVPCLLFGIWNTGHQHYLAIGETADLMAKIIYGAKVVLPIVIV 108 Query: 50 ASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIA 109 + L E ++R ++ + L++G+L+ + +P P W V L + FAVIIA Sbjct: 109 SYGVGLGIEFAFAQMRGHAI-----NEGYLVSGMLIPLILPVTIPLWQVALASAFAVIIA 163 Query: 110 KQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWL------PPHEIAVNIPGFIDAIQVIF 163 K+++GG G N N AM L ++P M + P I + G+ A + Sbjct: 164 KEVFGGTGMNILNVAMTARAFLYFAYPTYMAGDIKVWTAGEPTVIEQKLDGYTRATALGL 223 Query: 164 SGHTASGGD---MNTLRLGID-GISQATPLDTFK-------------------------- 193 + +S N +D + +A K Sbjct: 224 AAEQSSNLAAEIQNAREAYVDKKVKEAETKGEIKDPVAFNQKMYKEADNLPEVKKLKEQI 283 Query: 194 ----TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFL 249 T+ G + G+ + L L GG+ L+ W I +S Sbjct: 284 PSHVTNAFESKKGGIYSLKSFVIGTIPGSIGETSFLMCLIGGIILILTGVGSWKIIVSAF 343 Query: 250 VTLALCAMLGWLFSPETL--AAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 L +L HL+ G G F+ TDPVTA+ T G+ +G L Sbjct: 344 GGAYLMGLLFNAIGGNAFMAMPAHYHLVMGGLAFGIVFMATDPVTAAQTEIGKWYYGFLI 403 Query: 308 GLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 G L LIR F YP+G+ VLL N+ PLIDYY R Sbjct: 404 GALTVLIRVFNPAYPEGIMLVVLLMNVFAPLIDYYVVAANKKRR 447 >UniRef50_A4BWI5 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Polaribacter irgensii 23-P RepID=A4BWI5_9FLAO Length = 420 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 90/383 (23%), Positives = 149/383 (38%), Gaps = 55/383 (14%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------------- 42 + R M +V++A +P + ++ G+ Sbjct: 42 HIKAADDLKRTMNIVIVALIPCLIFGMFNAGYQHYAAIDGSLRTDVLANFFTFDNLWIGI 101 Query: 43 --TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVL 100 L ++++ LL E + ++ V L+TG+L+ + +P P WM+ + Sbjct: 102 IKVLPLVIVSYGVGLLVEFIFAVIKGHEVE-----EGYLVTGMLVPLIVPVDTPLWMLSV 156 Query: 101 GTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ 160 VF VII K+++GG G N NPA+ L ++P +W+ ++ V + Sbjct: 157 AVVFGVIIGKEVFGGTGMNILNPALTIRAFLFFAYP----TWMSGDKVWVYDAVNMSEAD 212 Query: 161 VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGW 220 I + L I G + A L + + E + + G + G+ Sbjct: 213 AISGETMLGYYAKASQDLTIKGTNGAADL----VTTYGDRANELYSTFDKFMGFIPGSVG 268 Query: 221 QWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAA----------- 269 + L G L++ K W I LS V A+ ++ + Sbjct: 269 ETSTFLILIGAAILIFTKIASWRIILSAFVGAAVMGLIFNQVVAADIITESSKFYGLMST 328 Query: 270 -PQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFA 327 HL G GA F+ TDPVT S TN+G+ I+G L G + +IR F YP+GV A Sbjct: 329 VWWEHLTIGGLAFGAVFMATDPVTGSQTNKGKWIYGFLIGFISIMIRVFNPAYPEGVFLA 388 Query: 328 VLLANITVPLIDYYTRPRVYGHR 350 +LL N+ P ID+Y R Sbjct: 389 ILLMNVFAPTIDHYVVQGNIKKR 411 >UniRef50_A6L5A0 Na+-translocating NADH-quinone reductase subunit B n=31 Tax=Bacteroidetes RepID=A6L5A0_BACV8 Length = 402 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 89/372 (23%), Positives = 159/372 (42%), Gaps = 56/372 (15%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---------------------TLVQIL 48 + H+ + RIM +V++A +P + ++ G+ L +I+ Sbjct: 47 HIHDAIDSKRIMSMVVIALIPALLFGMYNVGYQHFLAVGQEAGFFEKFIYGFLAVLPKII 106 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E +V + + + + L++GLL+ + +P P W++ + T F+VI Sbjct: 107 VSYVVGLGIEFVVAQWKNEEIQ-----EGFLVSGLLIPMIVPVECPLWILAVATAFSVIF 161 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 AK+++GG G N FNPA+I L ++P +M+ Sbjct: 162 AKEVFGGTGMNIFNPALITRAFLFFAYPTKMSGDAVWVSTDSIFG--------------- 206 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQI-----MQYPIYSGILAGAGWQWV 223 +DG + AT L T+ + + + + G++ G+ + Sbjct: 207 -----IGGGQVVDGFTGATMLGQAATAAPGASELINVNGTPATMWDMVVGLIPGSIGETS 261 Query: 224 NLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----HLLSGAT 279 +A G + LLW W S + ++ +F Q+ H++ G Sbjct: 262 VIAIALGAIILLWTGVASWKTMFSVFAGGIVMGLIFNVFGSTDNMMAQLPWYEHIVLGGF 321 Query: 280 MLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLI 338 GA F+ TDPVT++ T +G+ I+G L G++ +IR GYP+G+ A+LL NI PLI Sbjct: 322 CFGAVFMATDPVTSARTEKGKFIYGFLIGVMAIVIRVLNPGYPEGMMLAILLMNIFAPLI 381 Query: 339 DYYTRPRVYGHR 350 DY + R Sbjct: 382 DYCIVQKNITAR 393 >UniRef50_A8ZWA7 NADH:ubiquinone oxidoreductase, subunit B n=4 Tax=Bacteria RepID=A8ZWA7_DESOH Length = 393 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 91/375 (24%), Positives = 145/375 (38%), Gaps = 62/375 (16%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT---------------------LVQ 46 +PY + R M +V+LA +P + ++ G+ L Sbjct: 45 APYVRDSIDLKRFMSMVILALMPPLFFGIYNTGYQASMAAGLSLSLFDVTLRGLRIVLPL 104 Query: 47 ILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAV 106 I+++ E L +RK ++ L+TGLL +++PP P W +G F V Sbjct: 105 IIVSYGVGFFWELLFASIRKHPIS-----EGFLVTGLLFPLTLPPSIPLWQAAVGISFGV 159 Query: 107 IIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGH 166 +I K+++GG G+N FNPA+ G L ++P +M+ Sbjct: 160 VIGKEIFGGTGRNIFNPALTGRAFLFFAYPARMSGDAVWVADLAT--------------- 204 Query: 167 TASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQ-----IMQYPIYSGILAGAGWQ 221 G+D ++ ATPL + VE + ++ G G+ Sbjct: 205 ----------GSGVDAVTGATPLAVAALAQAGESIVETLANTGLPWLTMFLGNYPGSIGG 254 Query: 222 WVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLF-----SPETLAAPQIHLLS 276 L LAG L+ W I + + L L LF P P HL+ Sbjct: 255 TSALCCLAGAALLIVTGIASWRIIIGGVAGLLATGWLLTLFAGPGAHPWFGLNPLYHLIM 314 Query: 277 GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITV 335 G G ++ TDPV+ R ++G L G+L LIR F YP+G+ A+L N+ Sbjct: 315 GGFAFGIVYMATDPVSGPGMENARWVYGFLIGMLTVLIRVFNPAYPEGIMLAILFMNLFA 374 Query: 336 PLIDYYTRPRVYGHR 350 PL+D+ R Sbjct: 375 PLLDHVAVSFRLKKR 389 >UniRef50_C2MAM1 NADH:ubiquinone oxidoreductase, na(+)-translocating, b subunit n=16 Tax=Bacteroidales RepID=C2MAM1_9PORP Length = 407 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 95/371 (25%), Positives = 157/371 (42%), Gaps = 49/371 (13%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG---------------------TLVQIL 48 + H+ + R+M V+LA VP + ++ G L +I+ Sbjct: 48 HVHDAIDSKRVMSTVVLALVPALLFGMYNVGLQHFIAIGQTAGFWSMFWFGFLAVLPKIV 107 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E V + + + + L+TG+L+ + +P P WM+ + +V+ Sbjct: 108 VSYVVGLGIEFAVAQWKHEEIQ-----EGYLVTGMLVPMIVPVDTPLWMIAVAVAMSVVF 162 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 AK+++GG G N FN A++ +L ++P MT D + V Sbjct: 163 AKEVFGGTGYNIFNVALVTRAILFFAYPAAMT---------------GDKVFVRTEPIFG 207 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQI-----MQYPIYSGILAGAGWQWV 223 GG + +DG S ATPL T+ ++ + + G + G+ + Sbjct: 208 FGGGGDMATAAVDGFSGATPLGQVATAGDTLPTIVNTMGEPSTLWDAFWGFIPGSIGEVS 267 Query: 224 NLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLA--APQIHLLSGATML 281 A L G + L+W + + +S +V AL +L HLL G Sbjct: 268 TFAILLGAILLIWTGVASYKVIVSGVVGAALMTLLFNAIGTTAAMQLDVAHHLLYGGFAF 327 Query: 282 GAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDY 340 G F+ TDPVT++ T G+ I+G L G++ IR GYP+G+ A+LL N+ PLIDY Sbjct: 328 GLVFMATDPVTSARTETGKWIYGLLVGVMCVFIRVLNPGYPEGMMLAILLMNVFAPLIDY 387 Query: 341 YTRPRVYGHRK 351 RK Sbjct: 388 VVVNNNISKRK 398 >UniRef50_Q52715 Electron transport complex protein rnfD n=1 Tax=Rhodobacter capsulatus RepID=RNFD_RHOCA Length = 358 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 111/313 (35%), Positives = 169/313 (53%), Gaps = 17/313 (5%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 + P+TH SR ML V+ A P LW FGW + L VSA + E LK+ Sbjct: 6 AGPHTHTLFTVSRTMLTVVAALTPATLFGLWEFGWPAIFLFLTTVVSAWVFEVACLKIAD 65 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + + D SA+L+G L+A+++PP APWW+ V+G+ A++IAK L+GGLGQN FNPAM+ Sbjct: 66 KPIRPFATDGSAILSGWLVAMTLPPYAPWWVGVIGSFIAIVIAKHLFGGLGQNLFNPAMV 125 Query: 127 GYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQA 186 +L+++ PVQMT+W+ P + P F+ + + F G D +S A Sbjct: 126 ARAMLVVALPVQMTTWIAPVGLLEG-PSFLHGLSITFLGSQE-----------FDAVSSA 173 Query: 187 TPLDTFKTSVRAGHSVEQIM-----QYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + L K+ + AG ++ +I+ G + G+ + + GG+ LL + I Sbjct: 174 STLSHIKSQISAGATMGEILPTLADLESRLLGFVPGSLGETSTVLLALGGLLLLVTRIIT 233 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 IPL+ L TL + + +P+ A P +HL SG+TML AFFI TD VT+ T G+ Sbjct: 234 PTIPLAVLGTLVTLSAICSFLAPDRFAPPILHLTSGSTMLCAFFIATDYVTSPVTTAGKW 293 Query: 302 IFGALAGLLVWLI 314 ++G G LV++I Sbjct: 294 VYGIGIGTLVFVI 306 >UniRef50_C0BFX7 NADH:ubiquinone oxidoreductase, subunit B n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BFX7_9BACT Length = 386 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 92/372 (24%), Positives = 148/372 (39%), Gaps = 62/372 (16%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFG---------------------WG 42 + + R M+ V++A +P + ++ G W Sbjct: 41 TTQKGAHIRDAVDLKRTMVTVIIALLPALIYGIYNTGYQYYAQTGVSFTFLEAFMHGAWK 100 Query: 43 TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT 102 + I+++ V L E R V + L+TGLL+ + +P P WMV + T Sbjct: 101 IVPMIIVSYVVGLSIEFGFAVYRGHEV-----NEGYLVTGLLIPMIMPVDIPLWMVAVST 155 Query: 103 VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVI 162 FAV+IAK+ +GG G N NPA+ ++P M+ A N Sbjct: 156 AFAVLIAKEAFGGTGMNILNPALTARAFAFFAYPTYMSGNKVWVSEASN----------- 204 Query: 163 FSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQW 222 +D IS T L T +S+ + ++ G + G+ + Sbjct: 205 -----------------VDAISGETILGTLAAGGEVNYSM-----FEMFQGAIPGSIAET 242 Query: 223 VNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLA--APQIHLLSGATM 280 L G + L+ W I ++ A+ +L L+ L + HL+ G Sbjct: 243 STLWVAVGALILILTGVGSWRIITGGILGAAVMGLLFNLWGANALMSFSWINHLVVGGFA 302 Query: 281 LGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLID 339 G F+ TDPV+ + TN+G+ I+G L G+ +IR F YP+GV A+LL N+ P ID Sbjct: 303 FGIVFMATDPVSGAQTNKGKWIYGILVGIFCIMIRVFNPAYPEGVMLAILLMNVFAPTID 362 Query: 340 YYTRPRVYGHRK 351 +Y RK Sbjct: 363 HYVVNGNIIKRK 374 >UniRef50_A6DRQ1 Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Bacteria RepID=A6DRQ1_9BACT Length = 387 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 95/373 (25%), Positives = 143/373 (38%), Gaps = 70/373 (18%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------------- 42 + + R+M+ V+LA VP I ++ G Sbjct: 47 HVRDSIDLKRMMITVVLAMVPCILFGIYNTGLQHYSALLSDGQIEALPGMVDMIVYGAIM 106 Query: 43 TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT 102 + IL ++ + E + +RK + + L+TG+L+A+ +P P W V L T Sbjct: 107 VVPVILTVYITGGIIEGIFACIRKHEI-----NEGFLVTGILIAMVVPASIPLWQVSLAT 161 Query: 103 VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVI 162 F V I K+ +GG G N NPAM L +FP Q++ Sbjct: 162 AFGVFIGKECFGGTGMNILNPAMTARAFLFFNFPSQISGDKVWVG--------------- 206 Query: 163 FSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQW 222 G + ++ ATP+ S ++ G + G+ + Sbjct: 207 -------------FDRGQEVVATATPMGLAAKGDEITWST-----MDMFLGFIPGSIGET 248 Query: 223 VNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQI----HLLSGA 278 LA + GG+ LL W L LV L A L L S + HL G Sbjct: 249 STLACIIGGIILLITGVASWRTMLGMLVGGFLFAWLISLGSTNPNDIAALGAVKHLCMGG 308 Query: 279 TMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPL 337 G F+ TDPV+++ T+ G+ I+G AG + L R YP+GV AVLL N+ PL Sbjct: 309 FAFGLVFMATDPVSSANTDLGKWIYGFGAGAMSMLFRIINPAYPEGVMLAVLLMNVFAPL 368 Query: 338 IDYYTRPRVYGHR 350 ID+Y R Sbjct: 369 IDHYVVKSSIKRR 381 >UniRef50_C9LBM8 Na(+)-translocating NADH-quinone reductase, B subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBM8_RUMHA Length = 315 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 87/347 (25%), Positives = 169/347 (48%), Gaps = 40/347 (11%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + + P+ R T +M+ V ++ +P + +++FG L L+ +L E + K+ Sbjct: 6 VINGPHLRTPRTTRNVMMHVTISLIPALLGAIYYFGIQALYLSGLSVAVCVLTEYIWQKI 65 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 K+ V T D SA++TGLLLA ++P P W +V VF++++ KQ++GG+G N NPA Sbjct: 66 TKKQV--TAGDFSAVVTGLLLAFNMPVTVPVWALVAADVFSILVVKQMFGGIGNNFVNPA 123 Query: 125 MIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGIS 184 ++G +++++++P + ++ P + +D +S Sbjct: 124 LMGRLLVMVAWPAAVMQYVVPRTV------------------------------SVDAVS 153 Query: 185 QATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHI 244 AT L T K+ G+S ++ G + GA + L L G ++ ++K + Sbjct: 154 AATILGTAKSGAETGYS-----YLQMFLGEMPGAMGETSKLLLLIGFAYMCYKKIVNAEA 208 Query: 245 PLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 ++++ T+ + + ++L G ++G ++LTD A + +G+LI+ Sbjct: 209 AVTYIGTVTILTFIFGP-DGLFTGDILLNLFGGGLIMGGCYMLTDYAFA--SRKGKLIYA 265 Query: 305 ALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 A+AG++ IR F YP+G+ F +L AN ++ + VYG +K Sbjct: 266 AVAGIITAAIRIFSVYPEGICFGILTANCMAGMLSVLYKKHVYGMKK 312 >UniRef50_Q0AAH0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAH0_ALHEH Length = 313 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 144/327 (44%), Positives = 186/327 (56%), Gaps = 20/327 (6%) Query: 20 IMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSAL 79 IM VL A VPG A WF G G V + +A V+A+ EA V LR++ A L D+S L Sbjct: 4 IMRQVLYALVPGTLALAWFQGVGVFVHLAVALVTAVAVEAAVQWLRRRPATAALSDHSVL 63 Query: 80 LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 +TG +LA+++PPLAPWW+ T+FAV+ K LYGGLG NPFNPAM+GYV+ LI+FP +M Sbjct: 64 VTGWILALAVPPLAPWWVTASATLFAVLFGKHLYGGLGFNPFNPAMVGYVMALIAFPREM 123 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAG 199 T W P G +A++ + G A +D ++ ATPLD T G Sbjct: 124 TFWFPAAAPGDWPVGAWEAVRGVLVGLDAP---------TLDALTGATPLDLLHTGAPPG 174 Query: 200 HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG 259 ++ + +G GW L +LAGG+WLL + I + IP + Sbjct: 175 GALA----------VESGPGWMVAPLLFLAGGLWLLRCRLIDFRIPAGM-LGAMALLATL 223 Query: 260 WLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG 319 P P HLL+G T+LGAFF+ TDPV+A+TT RGR ++GA G L LIR FGG Sbjct: 224 LWLLPGEQPDPLFHLLAGGTLLGAFFVATDPVSAATTARGRWVYGAGIGALALLIREFGG 283 Query: 320 YPDGVAFAVLLANITVPLIDYYTRPRV 346 YPDGVAFAVLL N P IDY RPR Sbjct: 284 YPDGVAFAVLLMNGAAPFIDYCFRPRR 310 >UniRef50_Q1QX85 Na(+)-translocating NADH-quinone reductase subunit B n=4 Tax=Proteobacteria RepID=NQRB_CHRSD Length = 411 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 93/394 (23%), Positives = 144/394 (36%), Gaps = 85/394 (21%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT-------------------- 43 S+ + + RIM+ V L P + ++ G Sbjct: 40 VTKSTAHVRDGIDLKRIMITVWLCTFPAMFFGMYNAGLQANMAIGDGFGALGGWREAVTM 99 Query: 44 ----------------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLT 81 L L+ E L R V + +T Sbjct: 100 ALAGSHDPGSIWANFVLGATYFLPIYLVTFAVGGFWEVLFAVKRGHEV-----NEGFFVT 154 Query: 82 GLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTS 141 +L A+ +P P W V LG F V+I K+++GG G+N NPA+ G L ++P Q++ Sbjct: 155 SVLYALILPATIPLWQVALGITFGVVIGKEIFGGTGKNFLNPALTGRAFLYFAYPAQISG 214 Query: 142 WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHS 201 DG + AT L T + + Sbjct: 215 DSVWV--------------------------------AADGYTGATALSTAAQNGMSAVQ 242 Query: 202 VEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWL 261 + + + G + G+ + LA L G LL + W I L V +AL AML Sbjct: 243 -QAYSWWDAFLGFIPGSVGETSTLAILIGAAVLLITRIASWRIMLGVFVGMALTAMLFTA 301 Query: 262 FSPETLA----APQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 E+ HL+ G G F+ TDPV+AS T+ G+L+FG L G++ LIR Sbjct: 302 IGSESNPMFGMPWYWHLVLGGFAFGMVFMATDPVSASMTDPGKLLFGFLIGVMTVLIRVV 361 Query: 318 G-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +P+G+ A+L AN+ P+ID++ R Sbjct: 362 NPAFPEGIMLAILFANLFAPMIDHFFVQANIKRR 395 >UniRef50_Q7MIC8 Na(+)-translocating NADH-quinone reductase subunit B n=288 Tax=Bacteria RepID=NQRB_VIBVY Length = 414 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 87/408 (21%), Positives = 146/408 (35%), Gaps = 96/408 (23%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT------------------- 43 S + + RIM++V A P + ++ G Sbjct: 39 LVTKKSSHVRDSVDLKRIMIMVWFAVFPAMFWGMYNAGGQAIAALNHMYAGDQLAQIIAG 98 Query: 44 -------------------------------LVQILLASVSALLAEALVLKLRKQSVAAT 72 L + E L +RK V Sbjct: 99 NWHYWLTEMLGGTISADASWGSKMLLGATYFLPIYATVFLVGGFWEVLFCMVRKHEV--- 155 Query: 73 LKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLL 132 + +T +L A+ +PP P W LG F V++AK+++GG G+N NPA+ G L Sbjct: 156 --NEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEIFGGTGRNFLNPALAGRAFLF 213 Query: 133 ISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 ++P Q++ + DG S AT L + Sbjct: 214 FAYPAQISGDVVW--------------------------------TAADGFSGATALSQW 241 Query: 193 KTSVRAGH----SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 + + I + G + G+ + LA L G +++ + W I Sbjct: 242 AQGGNSALVNTVTGAPITWLDAFIGNIPGSIGEVSTLALLIGAAMIVYMRIASWRIIAGV 301 Query: 249 LVTLALCAMLGWLFSPETLA----APQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFG 304 ++ + + + L + +T A HL+ G G FF+ TDPV+AS TN+G+ +G Sbjct: 302 MIGMIVVSTLFNVIGSDTNAMFSMPWHWHLVLGGFAFGMFFMATDPVSASFTNKGKWWYG 361 Query: 305 ALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 L G + +IR YP+G+ A+L AN+ PL D+ + R+ Sbjct: 362 ILIGAMCVMIRVVNPAYPEGMMLAILFANLFAPLFDHLVVEKNIKRRQ 409 >UniRef50_Q315L3 Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Desulfovibrionales RepID=Q315L3_DESDG Length = 319 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 177/348 (50%), Gaps = 40/348 (11%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 + ++P+ H R +M L+A +P +A ++ +G L + L+ V+A++ EA+ L Sbjct: 12 LAVGAAPHWHCGRTIHGMMRDYLIALMPAVAMAVYMYGLDALRVMALSCVTAVVIEAVCL 71 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K ++ V T+ DNSALL GLLLA +P APWW+V+LG+ F +++ + ++GGLG NP Sbjct: 72 KAMERDV--TVDDNSALLQGLLLAFLLPASAPWWLVILGSAFTILLGRLVFGGLGANPVC 129 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 ++G+ +L IS+ ++M + Sbjct: 130 APLVGWAILSISWKLEMDIDAAMLNTMLVN------------------------------ 159 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 PL K V I + +G GA A L GG++LL ++ +RW Sbjct: 160 -----PLTQLKYFGAQ--KVADISYTGLLAGQQLGALGSSQVGALLLGGIYLLVRRTVRW 212 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 +P +F + L + + + A+P HLL+G+ + GAFF++TD ++ +I Sbjct: 213 QLPAAFFGGVLLISGIFYAIDSSQYASPLFHLLTGSVVFGAFFLVTDSSSSPVGKAAMVI 272 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 FG LAG +V IR +G YPDGV FA+LLAN+T PL+D RP+ +G R Sbjct: 273 FGLLAGGMVVTIRVYGMYPDGVPFAILLANMTSPLLD-MIRPKPFGAR 319 >UniRef50_Q4K755 Electron transport complex, RnfABCDGE type, D subunit n=7 Tax=Pseudomonas RepID=Q4K755_PSEF5 Length = 330 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 136/331 (41%), Positives = 198/331 (59%), Gaps = 17/331 (5%) Query: 17 TSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDN 76 + M VLLA +PG+ LW + WG L+ +LLA+ AL EALVL LR++ + L D Sbjct: 11 LRQAMQRVLLATLPGLLVLLWLYAWGPLLNLLLAASGALAMEALVLFLRRRPLQPALSDG 70 Query: 77 SALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFP 136 SAL++ LLA+++PP PWW+ + AV++ KQ+YGG+GQNPFNPAM+GY + L+ FP Sbjct: 71 SALVSATLLALALPPYCPWWLPLSAAASAVLLGKQVYGGVGQNPFNPAMLGYALALLCFP 130 Query: 137 VQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSV 196 MT W PH + + G + D +QAT LD+ + + Sbjct: 131 QSMTHWPAPHAL-DLLGGLQQVFGLG-------------GNPPPDAWAQATALDSLRIN- 175 Query: 197 RAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCA 256 +V+++ G G G +WVNL +LAGG++LL Q+ I W P+ L +L L + Sbjct: 176 -KSLTVDELFAGNPAFGHFGGRGTEWVNLGFLAGGLFLLQQRVIGWQAPVGMLGSLLLIS 234 Query: 257 MLGWLFSP-ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIR 315 +L W S ++ +P HLLSGA+MLGAFFI+T+PV+ + RL+FG GLL +LIR Sbjct: 235 LLCWNGSGSDSHGSPLFHLLSGASMLGAFFIVTEPVSGPKAAKARLLFGVGVGLLTYLIR 294 Query: 316 SFGGYPDGVAFAVLLANITVPLIDYYTRPRV 346 ++GGYPDG+AFAVLL N+ VP ++ + + Sbjct: 295 TWGGYPDGLAFAVLLMNLAVPALERLSSEKP 325 >UniRef50_C6BZS9 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS9_DESAD Length = 323 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 40/350 (11%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 + ++ +P+ ++R ++M LLA VP + FG L + +A +A+LAE L Sbjct: 14 VRLTVSPAPHWRSKRTVEKMMQSHLLALVPALLMAFNMFGLPALATVGIAGTAAVLAEVL 73 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 LK++ + V + + +AL GLL +P APWW+V G V +++ + ++GG G NP Sbjct: 74 CLKMQNRDV--NVDNYTALYEGLLFVFLLPAGAPWWLVASGAVLTIVLGRTVFGGFGSNP 131 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 ++ + +S+P M +N Sbjct: 132 ICAPLVAWAFCRLSWPAAMDIDANLAHFMINA---------------------------- 163 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 PLD K ++EQ ++ G G LA LAGG++L+ + Sbjct: 164 -------PLDQLKFFGL--DTLEQFNYTDLFLGKQLGGLGASQILAVLAGGIFLIATGWV 214 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 R IP +FLV + + A + W+ PE A P HLL+G+ M GAFF+ D ++ + Sbjct: 215 RVFIPAAFLVGVTVTASIFWMIDPEVYANPLFHLLTGSVMFGAFFLAPDVASSPVGMIPQ 274 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++FG +AG +V +IR +G YPDGV FA+++AN+ PL+D RP+ +G + Sbjct: 275 ILFGLIAGTMVIIIRVYGIYPDGVPFAIMVANLLTPLLDR-VRPKPFGGK 323 >UniRef50_B0S2D0 Sodium-translocating NADH-quinone reductase subunit B n=2 Tax=Finegoldia magna RepID=B0S2D0_FINM2 Length = 331 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 83/326 (25%), Positives = 150/326 (46%), Gaps = 29/326 (8%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV-LKLRKQSVAATLKDN 76 ++M V+ A +P ++F+G L LL + A L E L K+ K+ + Sbjct: 15 QKMMHPVMFALLPIALVAIYFYGLRVLALFLLNIIVACLVEYLANAKIFKRKKIS----E 70 Query: 77 SALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFP 136 +A++T L +++PP P+W+ ++G F + K ++GG +N FNPA++ V + ++FP Sbjct: 71 AAIVTSCLYTMTLPPSIPFWISIVGIAFGIFFGKMVFGGFAKNVFNPALVARVFIYVNFP 130 Query: 137 VQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSV 196 QMT + GG L +D ++Q+TP+ FK Sbjct: 131 QQMTIYWNKAVGG------------------FPGGFGTYLTKSLDSMTQSTPMTAFKVHS 172 Query: 197 RAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCA 256 + G + G + + + G ++L+++K W I ++ + Sbjct: 173 TFE------TIPTMLFGQIPGVIGETCKVLIIIGAIYLIYKKVASWQIMAGSVLGFCALS 226 Query: 257 MLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRS 316 ++ ++ P +L G + G F+ TDPV+A+ T G+ I+G + G++ +IR Sbjct: 227 LVFNAMGVTSVPNPIYGMLMGGFLFGTVFMATDPVSAAKTTVGKWIYGFIIGIVTVIIRG 286 Query: 317 FGGYPDGVAFAVLLANITVPLIDYYT 342 F + GV FAVL+ N P+IDY Sbjct: 287 FALFAGGVMFAVLIGNTFAPIIDYCV 312 >UniRef50_B0MXK4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXK4_9BACT Length = 368 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 138/364 (37%), Gaps = 59/364 (16%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT---------------LVQIL 48 + + + R M++V++A +P + ++ G+ L I+ Sbjct: 41 TTSRGAHIRDCNDMKRTMIVVVVALMPALLFGMYNTGYQVGMTGWAAFWFGFLKVLPMIV 100 Query: 49 LASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVII 108 ++ V L E + R V + L++GLL+ + +P P WM+ LGT FAVI Sbjct: 101 VSYVVGLGIEFFFAQKRGHEV-----NEGFLVSGLLIPMIMPVGTPLWMIALGTAFAVIF 155 Query: 109 AKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTA 168 K+++GG G N FNPA++ + ++ ++ Sbjct: 156 GKEVFGGTGMNVFNPALVARAFVFFAYTPFISGEKVWFAD-------------------- 195 Query: 169 SGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWL 228 D +S AT L+ TS +S + G + G + LA L Sbjct: 196 ------------DAVSGATALEQLATSGAMSYSTA-----DAFLGFIPGCVGETSTLAIL 238 Query: 229 AGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILT 288 G LL+ W + T HL+ G GA F+ T Sbjct: 239 IGAAILLFTGVASWRTMSFVFIGGLAMGYFFQALGVTTYP-AWEHLIVGGFAFGAVFMAT 297 Query: 289 DPVTASTTNRGRLIFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVY 347 DPVT++ T G+ I G L G L LIR YP+G+ A+L N PL+DY Sbjct: 298 DPVTSAQTRTGQYIVGFLTGALAVLIRVVNPAYPEGMMLAILFMNALAPLVDYCVVESSI 357 Query: 348 GHRK 351 RK Sbjct: 358 SRRK 361 >UniRef50_A4CPG2 Na(+)-translocating NADH-quinone reductase subunit B n=20 Tax=Bacteria RepID=A4CPG2_9FLAO Length = 425 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 87/393 (22%), Positives = 148/393 (37%), Gaps = 80/393 (20%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------- 42 + + R M V++A +P + + G+ Sbjct: 41 TTHNGAHVRGADDLKRTMNTVIMALIPVLLFSFFNTGYQHYAAIEAANGAPRELDLFGNF 100 Query: 43 ------------TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIP 90 + ++++ LL E + ++ V L+TG+L+ + +P Sbjct: 101 LTWENFWLGFTQVIPLVIVSYGVGLLVEFIFAVIKGHEVE-----EGYLVTGMLVPLIVP 155 Query: 91 PLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAV 150 P WM+ + VF V+I K+++GG G N NPA+ L ++P M+ AV Sbjct: 156 VDTPLWMLAVAVVFGVVIGKEVFGGTGMNILNPALTIRAFLFFAYPTWMSGDKVWVHEAV 215 Query: 151 NIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPI 210 G D IS T L + + G+S + Sbjct: 216 ERAGTA------------------------DAISGETILGSLAQNAEHGYSTA-----DM 246 Query: 211 YSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAA- 269 + G + G+ + L GG++L++ + W I LS ++ + ++ + Sbjct: 247 FFGFIPGSVGETSAFLILLGGLFLVFSRIASWRIMLSAVIGALVMGLIFNGVADAGWVTE 306 Query: 270 -----------PQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFG 318 HL+ G G ++ TDPVT S TNRG+ ++G L G L +IR F Sbjct: 307 SSRFYSLMSFEFWQHLIVGGLAFGIVYMATDPVTGSQTNRGKWVYGFLIGFLSVMIRVFN 366 Query: 319 -GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 YP+GV A+LL N+ P ID+Y R Sbjct: 367 PAYPEGVFLAILLMNVFAPTIDHYVIRANVKKR 399 >UniRef50_Q1K3T0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3T0_DESAC Length = 387 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 87/379 (22%), Positives = 149/379 (39%), Gaps = 75/379 (19%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWG--------------------------- 42 + + R+M +++LA +P I +W G+ Sbjct: 43 HVRDSINHKRVMSVIMLALLPCIFMAMWNSGYQENLTLNQMLAAGQIDALPGFSDSSSVL 102 Query: 43 ---------TLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLA 93 L L+A ++ + + +RK+++ D L+T L+A+ +PP Sbjct: 103 ANVLTGAGMLLPVFLVAIITQAVWVVVFAAMRKKTI-----DAGFLVTAALIALLMPPTV 157 Query: 94 PWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIP 153 P W V + T F V+I ++++GG+G N NPA++ +V L ++ P M+ Sbjct: 158 PLWQVAIATSFGVVIGREVFGGIGMNFLNPALVAWVFLSLAHPTSMSGDAVW-------- 209 Query: 154 GFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSG 213 +DG + ATPL + A + + I + G Sbjct: 210 ------------------------TAVDGYTGATPLAMALSDGTASLAAQGITWKSAFLG 245 Query: 214 ILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIH 273 + G+ + LA L G LL W I S ++ + + L +F P H Sbjct: 246 TIPGSMGETSALACLFGAAILLISGIASWRIMASVVLGVIALSSLLCMFDSNA-MNPAWH 304 Query: 274 LLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG-YPDGVAFAVLLAN 332 L+ G G F+ TD +A+ T +G+ I+G L G+LV +R + P+ V +L N Sbjct: 305 LVLGGLAFGTVFLATDHSSAAMTTKGQWIYGILIGVLVVAVRVYNPMMPESVGMIILFGN 364 Query: 333 ITVPLIDYYTRPRVYGHRK 351 + PLID RK Sbjct: 365 VAAPLIDRLIVNAHIKKRK 383 >UniRef50_C6BTM1 Electron transport complex, RnfABCDGE type, D subunit n=4 Tax=Desulfovibrio RepID=C6BTM1_DESAD Length = 326 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 96/347 (27%), Positives = 165/347 (47%), Gaps = 40/347 (11%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 ++ P+ H R + ++A +P A +W + + + L+ +A++ E + L Sbjct: 10 LTVSIPPHAHCGRTFKQDAFETIIALLPAAAFAIWHYQMLAVRVLALSCFAAVITETICL 69 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K+ + A + +ALL GL+ IPP APWW+VV G+ +V + + ++GGLG NP Sbjct: 70 YFMKREIEA--DNYTALLYGLMFGFLIPPAAPWWLVVAGSFISVFMGRMIFGGLGTNPLC 127 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 ++G+ VL +S+P M + + Sbjct: 128 VPLVGWAVLAVSWPELMDFDMTMLASELT------------------------------- 156 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 PL K ++++ + G G A + GG++LL ++ +R Sbjct: 157 ----YPLSQLKNFGPE--TLDEYSIKSLLLGFQLGGTGAAQAGAVMLGGIYLLVRRIVRP 210 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 IPL+F+ +A A + + P A+P+ HL+ G+T+ GAFF+ TD ++ + L+ Sbjct: 211 DIPLAFIAGVAATAAIFFFIEPLEYASPEYHLICGSTLFGAFFLATDGPSSPAGHIPMLV 270 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 +G + G LV +IR +G YPDGV FA+LLAN+ PLID +P +G Sbjct: 271 YGFIGGALVVIIRVYGIYPDGVPFAILLANLMTPLIDKL-KPGPFGG 316 >UniRef50_B6WV80 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV80_9DELT Length = 319 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 109/350 (31%), Positives = 168/350 (48%), Gaps = 39/350 (11%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 ++ +++ PY H R R L+ L A +P + +W +G + + L A+L EA Sbjct: 9 VLLAMSAPPYWHCGRTVRRQSLMTLAALLPAVIGAVWTWGLPAVRVMSLCVAVAVLTEAA 68 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 KL + + + D +A+ +GLLL+ +P APWW+ V+ + A+ + K +GGLG NP Sbjct: 69 CQKLMGREL--AIDDYTAVCSGLLLSFMLPADAPWWIAVMAPLIAISLGKMAFGGLGANP 126 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 N +++G+ VL +SFP+ ++ P+ + +N +D Sbjct: 127 VNTSVVGWAVLFVSFPL----FMEPNAVQLNAASMVD----------------------- 159 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 PL K A +I + G A GG L + I Sbjct: 160 -------PLVRLKFFGWADAG--RIPLQDLLLGQQINGLGAGQVGALFLGGSLLAARGII 210 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RW I L F +A A L ++ SP T A+P HL +G+ MLG FF++TDP A + Sbjct: 211 RWQIALGFFAGVAGLAALFYMNSPATDASPLFHLCTGSVMLGGFFLITDPANAPSRPLPM 270 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 ++G L G LV IR +G Y DGV FA+LLAN+ PL+D RP+ +G R Sbjct: 271 FLYGLLGGALVMTIRKYGIYLDGVPFAILLANLVAPLLDS-IRPKPFGVR 319 >UniRef50_A4SQL9 Na(+)-translocating NADH-quinone reductase subunit B n=3 Tax=Proteobacteria RepID=A4SQL9_AERS4 Length = 409 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 86/402 (21%), Positives = 150/402 (37%), Gaps = 92/402 (22%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT-------------------- 43 ++ + + R+M++V LA P + ++ G Sbjct: 40 VTRNAAHVRDAIDLKRMMIMVWLAVFPAMFWGMFNVGNQAIAAIAHLGTVAGADTWQYAL 99 Query: 44 --------------------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 L L + E L +RK + + Sbjct: 100 AQLLGASLDPAVAGIGSKMLIGATHFLPIYLTVFLVGGFWEVLFAMVRKHEI-----NEG 154 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 +T +L A+ +PP P W LG F V++AK+++GG G+N NPA+ G L ++P Sbjct: 155 FFVTSILFALIVPPALPLWQAALGITFGVVLAKEVFGGTGKNFLNPALAGRAFLFFAYPG 214 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 Q++ +DG S AT L + + Sbjct: 215 QISGDAVWV--------------------------------AVDGYSGATALSQWAQGGQ 242 Query: 198 A----GHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 G + + I + G L G+ + L L G +++ + W I ++ + Sbjct: 243 MALINGATGQTISWMDAFLGNLPGSIGEVSTLMILIGAAMIVYMRIASWRIIAGVMIGMV 302 Query: 254 LCAMLGWLFSPETLA----APQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGL 309 ++L + +T HL+ G G F+ TDPV+A+ TN+G+ +GAL G+ Sbjct: 303 ATSLLFNVIGSDTNPMFNMPWHWHLVLGGFAFGMAFMATDPVSAAFTNKGKWWYGALIGV 362 Query: 310 LVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +V LIR +P+G+ A+L AN+ PL D++ R Sbjct: 363 MVVLIRVVNPAFPEGMMLAILFANLFAPLFDHFVAQANIKRR 404 >UniRef50_A6TT06 NQR2 and RnfD family protein n=2 Tax=Bacteria RepID=A6TT06_ALKMQ Length = 320 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 88/334 (26%), Positives = 155/334 (46%), Gaps = 29/334 (8%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 ++M VL + +P ++F+GW TLV + + SV + E L + + V+ + Sbjct: 12 QKMMRKVLYSLIPVTLGSIYFYGWRTLVLMAVISVFGIFTEYLFKRKSNKKVSEAV---- 67 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 L+T +LL +++P P+W+ ++G +F ++ AK+++GG G N FNPA+ L ++FP Sbjct: 68 -LVTSILLTLTLPASTPFWVGIIGIIFGIVFAKEIFGGFGHNVFNPALAARTFLYVTFPE 126 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 MT +Q GG L +D I+Q+TPL + Sbjct: 127 PMT------------------VQWSTVSSGFPGGFARYLSPALDTITQSTPLGILRQGG- 167 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 E + ++ G +G+ + L +LL+ K W + L+ ++ Sbjct: 168 -----EMLPLRNLFIGNTSGSLGEASAFLILVAAAYLLFTKTADWKLMLAPVIGFVGIHS 222 Query: 258 LGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 + L + ++ +P LLSG + F+ TDP+TA + I+G L G++ +IR F Sbjct: 223 ILLLANVSSVPSPLHGLLSGGFLFMTVFMTTDPITAPKQTEAKWIYGLLIGIIASVIRIF 282 Query: 318 GGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G + G FAVL+ N P++D + RK Sbjct: 283 GIFVGGAMFAVLIMNTFSPILDEGIKHLKSSKRK 316 >UniRef50_B8J065 NQR2 and RnfD family protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J065_DESDA Length = 320 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 101/351 (28%), Positives = 158/351 (45%), Gaps = 40/351 (11%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 ++ ++ + H R + L +L +P A +W +G L + L+ + ++ EAL Sbjct: 9 VLLAMSVPSFWHCGRTIRKYSLFTILCCLPAAAMAIWNWGLPALRVMSLSVAACVVVEAL 68 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 K + + + D +A+ GL+ A +P APWW+V+LG + + + K +GGLG NP Sbjct: 69 CEKAMGRQIE--VDDFTAVYAGLIFAFLLPADAPWWLVILGAIICITLGKMAFGGLGANP 126 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 + ++G+ VL +SFP+ M N ++LG Sbjct: 127 VSTPLVGWAVLAVSFPIFMDP--------------------------------NAMQLGT 154 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 D I PL K A S + I + G L AGG +L + Sbjct: 155 DFID---PLVRLKFFGAA--SADSIPLLDLLMGKQISGLGAGQVLGLFAGGSFLCATGTV 209 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 RW I L F V +A A + P A+ HL +G+ MLG FF+ T+ T Sbjct: 210 RWQISLGFFVGVAALAAFFHMSDPVHNASAFFHLCTGSVMLGGFFMATEMGTTPLRPLPM 269 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 ++G GLLV +IR +G + DGV FA+LLAN+ P +D RPR +G + Sbjct: 270 FLYGLTGGLLVMVIRKYGVWIDGVPFAILLANMLTPYLDML-RPRPFGGSR 319 >UniRef50_Q1Q257 Similar to Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q257_9BACT Length = 367 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 34/350 (9%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPG-IAAQLWFFGWGTLV--QILLASVSALLAE 58 + P+ N T + M VL+A G + ++F+G ++ I+ V + + Sbjct: 48 KHTAQTQPFIRNNTDTKKFMGAVLIALTMGWVFPAMYFYGLQCVISKLIVSLVVGVFVVD 107 Query: 59 ALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQ 118 + + ++ + ++ LL+ +PP AP W++ G A+I + + GG+G Sbjct: 108 VIWAIIAREDHIS----EGGFVSCLLVPAILPPQAPLWLIGFGAAMAIIF-RNILGGVGY 162 Query: 119 NPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRL 178 N NPA+ + L I FP + + D++TLR Sbjct: 163 NLVNPALFSRLFLTICFPSL--------------------LATGYQMPFVGIPDLHTLRY 202 Query: 179 GIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQK 238 G+D I+ ATPL FKT + + G G+ + LA + G+WL+ K Sbjct: 203 GLDTITHATPLTAFKTDGTIT------SYFSLLIGTANGSLGETCRLALILSGIWLVKMK 256 Query: 239 AIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNR 298 W +P+S+ ++ + + + L S E +A P LLSG +LGAF+++TDP+TA+ + Sbjct: 257 VANWRLPVSYFGSVFIFSGMFSLLSKENVAPPIFQLLSGGLVLGAFYMITDPITATYNQK 316 Query: 299 GRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 + I+G G + L+R++ +G +A+LL N+ I Y Sbjct: 317 AKWIYGIGCGFITVLLRNYTTLSEGAMYAILLMNLLAIPIQSLMVKIRYR 366 >UniRef50_D2MNQ0 NQR2 and RnfD family protein (Fragment) n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ0_9FIRM Length = 366 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 54/357 (15%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQL--------WFFGWGTLVQILLASV 52 M F +P +R T IM+ V L + +A + W + + ++ Sbjct: 1 MKFLFNPAPNYRTKRSTDSIMMDVGLGLLVVLAYAIIWYGFNNGWNYSLRIGLMAMMTCT 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQL 112 +A+L EA+ K+ K+ V +LK + +T L++ + ++ +++ T+ AV+ K + Sbjct: 61 TAILTEAIYFKVMKKDVKNSLKHSYVWITALIITLITRINVSYYALIIATIIAVLFGKLI 120 Query: 113 YGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGD 172 +GG GQN FNPA +++ SF ++ Sbjct: 121 FGGFGQNIFNPAAFAEAIIMNSFAASVSE------------------------------- 149 Query: 173 MNTLRLGIDGISQATPLDT-------FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNL 225 D ++ ATP+ T ++S ++ G L Sbjct: 150 --------DFMTGATPMATLSSLNWVIRSSAFEAVLQPFNGFVGMFLGNYYSTIGASFAL 201 Query: 226 AWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFF 285 L G +L+++KAI W + ++L + +++ LF + +++L G + GA F Sbjct: 202 VILLVGGYLIYRKAIDWRLTCTYLAAIFCMSLITGLFHGNAIKFAIVNVLGGGVVFGAVF 261 Query: 286 ILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYT 342 +LTDPVT+ + G+ +F A L LIR PDGV F++LL N+ P ID Sbjct: 262 MLTDPVTSPVSPAGKYVFAIGAATLTLLIRWKANLPDGVLFSILLMNMLTPAIDKMV 318 >UniRef50_A6WSA0 NADH:ubiquinone oxidoreductase, subunit B n=20 Tax=Shewanella RepID=A6WSA0_SHEB8 Length = 416 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 92/395 (23%), Positives = 141/395 (35%), Gaps = 91/395 (23%) Query: 10 YTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT-------------------------- 43 + + R M LV L +P I L+ G Sbjct: 53 HVRDAIDVKRTMTLVGLCLLPAILFGLYNIGLQAQLALAGGLSTPDIWKLEIFNTLFGGL 112 Query: 44 -----------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLA 86 L L A +++L E + ++R Q + +T LL Sbjct: 113 SQDTGILGLFLYGLSFYLPIYLTALLTSLFWEVVFARVRGQEL-----HEGFFVTALLFT 167 Query: 87 VSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPH 146 + +P P W+V +G F V++AK+L+GG+G N NPA+ G + ++P ++ + Sbjct: 168 LILPVSTPLWLVAMGISFGVVVAKELFGGMGYNFLNPALAGLAFIYFAYPSEVAT----- 222 Query: 147 EIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRA------GH 200 + +DG S AT L + Sbjct: 223 ---------------------------IKQLVAVDGFSGATALAQTAAGKLSFADYAWFS 255 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 + + + G GA + LA L GG LL + W I L L+ + A L Sbjct: 256 AFSDPNWWNNFFGFTVGAIGETSTLAILIGGSLLLISRLADWRIVLGVLLGMIATATLCN 315 Query: 261 LFSPETL----AAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRS 316 + HL++G L F+ TDPVT S T +G+ +GAL G + LIR Sbjct: 316 YIGSSSNDMMAMPWTWHLVTGGFALAMMFMATDPVTTSYTRQGKFAYGALIGFMTVLIRV 375 Query: 317 FGG-YPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 P+GV A+L AN+ PL DY R Sbjct: 376 ANPKMPEGVMLAILFANLWAPLFDYLVARANIKRR 410 >UniRef50_B0P6D0 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D0_9FIRM Length = 317 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 32/321 (9%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M V+L + A ++G L+ A + A++A+A LR + A +D S ++ Sbjct: 1 MSDVILLLLVLCALGFLYYGPRALMVCAAAVIPAVIADAACTLLRGR--APNPRDLSPIV 58 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TGL++A+ +P P+++ +VFA+ I K +GG G N FNPA G+ I +P + Sbjct: 59 TGLIIAMMMPASVPYYVPAAASVFAIAIVKHPFGGTGHNLFNPAAAGFSFAAICWPGLVF 118 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 + P +P F D T L V Sbjct: 119 MYPMPF---DRLPLFGDVT---------------------------TTLYQNPAFVIKLG 148 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 + + G G L A +LL+++ +RW +P+ FL T AL A L Sbjct: 149 GIPSNDITSMLLGNYPGPMGATNILVVAACLGYLLFRRTVRWQLPVPFLATCALIAFLFP 208 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 + + + + L+SGA + GA F +TDPVT+ + ++G AG + L R GGY Sbjct: 209 RVAGDGIQSVIYELMSGAMLFGAVFCITDPVTSPKRDTSLAVYGVFAGAITMLFRYVGGY 268 Query: 321 PDGVAFAVLLANITVPLIDYY 341 + ++FA+LL+N V LID Y Sbjct: 269 EESMSFAILLSNAFVSLIDRY 289 >UniRef50_C8WYR0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYR0_DESRD Length = 315 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 37/347 (10%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 +++ P+ H+ ++M +LLA +P + + ++G+G + +A VSAL+ + L+ Sbjct: 6 LVVSAVPHAHSGNTLQKMMRQILLALIPALLIGVAYYGFGVVQVAAIAVVSALVWQVLLQ 65 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 K + V L + + +++ LLLA+ +PP PWW V +GT+ V++ ++YGG G NPFN Sbjct: 66 KAMHKPVC--LANMTTVVSALLLAMIMPPGLPWWAVCVGTLTMVLLGMEIYGGYGNNPFN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 +I +VVL ISFP M+SW P Sbjct: 124 GVLIAWVVLQISFPAAMSSWAYPPGEL--------------------------------- 150 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 ++ TPL + E + G G Q L L GG++LL+++ I W Sbjct: 151 MTINTPLQVLQEDGPF-FVNEFFSFSDLLMGRTVGFAGQTSALFLLLGGLFLLYRRVITW 209 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 HIP+SFL + A L W + E A+P HL++G TM+ AFF+ TD ++ T G L+ Sbjct: 210 HIPVSFLAGVVAFAGLFWAINAEAHASPLFHLVAGGTMISAFFLATDFPSSPVTKTGMLL 269 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 +G AG+L +IR +G +PDG FAV L ++ PL+D PRVYG Sbjct: 270 YGFSAGVLTVVIRIWGQWPDGAFFAVFLMSMLTPLLDK-IAPRVYGR 315 >UniRef50_D1AFF8 NQR2 and RnfD family protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AFF8_SEBTE Length = 362 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 44/343 (12%) Query: 9 PYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQS 68 PY ++M V+LA P I +G L+ + +S +LAE L + Sbjct: 10 PYIRTNDNVGKVMGDVILALFPCILVTFPAYGIRPLLLCTVCVLSTVLAEWLFSMFFLKK 69 Query: 69 VAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGY 128 ++ D SA++TG+LL+ ++ P P ++ G AVI K GGLG+N FNPA++G Sbjct: 70 -KNSVNDLSAVVTGILLSFTLAPFTPLYIAAFGGAAAVIFGKIAVGGLGRNIFNPALLGR 128 Query: 129 VVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATP 188 + + FP M S + ++ +I+ I+ G S A Sbjct: 129 EFMTVFFPAAMGSGMIWGNESLLKYKYIEIIKSSEPG------------------SWAEY 170 Query: 189 LDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSF 248 LD + +GA ++ AGG++L++++ I WHIP S Sbjct: 171 LDRIFFTA-------------------SGAIGEYSIFLLAAGGIYLIYRERITWHIPFSM 211 Query: 249 LVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAG 308 + + L + + I + G +LG ++ TD T++TT ++ +G + G Sbjct: 212 FIVIFLGITVFTFLGFD------IKIALGGLILGGIYMATDMPTSTTTPAAKIYYGCMIG 265 Query: 309 LLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + V L + +++++L+ N+ +D RPRV+G + Sbjct: 266 VSVILCWMSRIEFETLSYSILIMNVFKNPVDSLCRPRVFGTER 308 >UniRef50_C9N0N0 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N0N0_9FUSO Length = 425 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 150/346 (43%), Gaps = 47/346 (13%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +++ +PY + T +M V+++ +P I A +G L+ I+ + SA++ E L Sbjct: 66 KLSFTPYIRTEVDTRSVMKDVIISLIPAIVAASLVYGAKALLVIVTSIFSAVVTEKLFSI 125 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + + D SA++TG+L+A+++ PL +V G A+I K +YGG+G+N NP Sbjct: 126 IFLND-KDSAHDLSAVITGILMALTLAPLTSLPVVAFGASMAIIFGKLMYGGIGKNVLNP 184 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G + + FP M+S I+ Sbjct: 185 AVVGREFMTVFFPAAMSSGTIWFSQEALRLSKINFFVNF--------------------- 223 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 Q TP+ + +G+ + + GG++LL + I WH Sbjct: 224 -QKTPI---------------MSYLDELLLTSSGSLGSYSAFVLILGGLYLLLKNRISWH 267 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 IP++ T + AM+ I + +G +L F+ TD T+ + G++ + Sbjct: 268 IPVTLFATSFIAAMVLKDG---------ISVSTGGLLLTGIFMATDMPTSPSFAGGKIYY 318 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G + G+++ L+ G + +++ +L+ N I+ RP V+G+ Sbjct: 319 GIMLGVVIALLSVLGVKNETLSYVLLILNPFTRFINKVFRPVVFGY 364 >UniRef50_A8RDS0 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RDS0_9FIRM Length = 502 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 84/374 (22%), Positives = 150/374 (40%), Gaps = 54/374 (14%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFG--------WGTLVQILLASV 52 M + SP ++ T +IML + +A + L ++ LV + + + Sbjct: 1 MKYIFNVSPNLRQKQSTQKIMLELTIALLIVFGFSLAYYFQAYGMDYVIRALVLMACSVL 60 Query: 53 SALLAEALVLKLRKQSVAATLKDNS-------ALLTGLLLAVSIPPLAPWWMVVLGTVFA 105 +AL+ E K+ V LK +T ++L + P + +++ T Sbjct: 61 TALVTEVAFAFFMKKGVKFDLKYVGKFLNSSFGWITAIILVLMTPISIRPFALIVSTFLC 120 Query: 106 VIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSG 165 ++ K L+GG G N FNPA +G ++ +F ++ I + Sbjct: 121 ILFGKLLFGGFGNNIFNPAAVGRAIIFATF----------MGATTDVVTTATPTTTIATE 170 Query: 166 HTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNL 225 D + + +D I +++G GA + L Sbjct: 171 FNWLVLDSDLITEMMDAIGG---------------------LGTLFTGWYPGALGETSAL 209 Query: 226 AWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFS--------PETLAAPQIHLLSG 277 L GV L +K I W IP +L ++ + LF P + P +H+L+G Sbjct: 210 LILILGVILAIRKVIDWRIPTIYLGSIFVLTAAIALFRGVGSYGNLPGFIWYPLVHVLTG 269 Query: 278 ATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPL 337 + GA F+LTDPVT+ T+ +G+ IF A ++ LIR P+G +++L+ N+ P+ Sbjct: 270 GVVFGAVFMLTDPVTSPTSAQGKTIFALGAAIITVLIRIKANLPEGCLYSILMMNMLTPM 329 Query: 338 IDYYTRPRVYGHRK 351 I+ + RK Sbjct: 330 IERALDGKQLALRK 343 >UniRef50_A5EVI1 Electron transport complex protein, D subunit n=2 Tax=Cardiobacteriaceae RepID=A5EVI1_DICNV Length = 317 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 125/343 (36%), Positives = 176/343 (51%), Gaps = 31/343 (9%) Query: 3 FRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVL 62 F P + T+ +M V+LA +P I + F G + ILLA +SA EAL+L Sbjct: 4 FSPRRVPVDYFAPTTAYVMWSVVLALMPAIVVLVIFSGSRWIGLILLAILSAWFFEALIL 63 Query: 63 KLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFN 122 +LR ++V LKD +A LT LLL +S+P P W+V++G FA+I AK LYGG+G NPFN Sbjct: 64 RLRGKAVLPHLKDGTATLTALLLVLSLPVTVPAWLVIIGVGFALIFAKHLYGGMGMNPFN 123 Query: 123 PAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDG 182 PAM+G+ LL+SFP M H + ++ D Sbjct: 124 PAMVGFAFLLVSFPAAMGQ------------------------HASLSVPPSSFWQTFDT 159 Query: 183 ISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRW 242 + AT LD + S+ I P + LA GG +LL ++ + Sbjct: 160 TTAATLLDYSRQLRIDDASLTAITWLPSWQRFFW-------LLAVALGGCYLLKKRLLDA 212 Query: 243 HIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLI 302 +P++ L++ L A L W + P L SGAT GA+FI TDPVTA+ T GR + Sbjct: 213 RLPIAVLLSALLTATLFWFIDADRYLNPAAQLFSGATFFGAWFIATDPVTAAATPFGRYL 272 Query: 303 FGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPR 345 +G++ G+L IR+ G +PDG AFAVL AN VP++DY RP Sbjct: 273 YGSIIGVLTVCIRNLGNFPDGFAFAVLCANALVPVLDYVFRPH 315 >UniRef50_B8FN65 NQR2 and RnfD family protein n=3 Tax=Desulfobacteraceae RepID=B8FN65_DESAA Length = 329 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 96/350 (27%), Positives = 160/350 (45%), Gaps = 31/350 (8%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 F ++ +P+ HN + S+ ++LAA+P + + +G L I L +A+ E + Sbjct: 6 KFVVSYAPHCHNGDRISKKSYNMMLAALPAVFFGILQYGIAALSVICLCVSTAMAWELIF 65 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 ++ KQ T+ D +A LTGLLL + +PP+ PWW+++ T ++I K ++GG+G NPF Sbjct: 66 NRIMKQP--PTIGDGNAALTGLLLGMLMPPVVPWWVILTMTFVTILIGKVIWGGMGGNPF 123 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NP ++GY + +S+ M + + I + S G Sbjct: 124 NPVILGYAITRLSWGGFMDVDASLAPGYIFDFNMANPIVAVKSAIWDGAGADAASAFSTK 183 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 + G G L + GG++L+ + +R Sbjct: 184 A---------------------------LLLGQHCGTIGTMFGLGLIVGGLYLIIRGYLR 216 Query: 242 WHIPLSFLVTLALCAMLGWLFSPE-TLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W + LS+L + + A L F PE A H+L+G T++ AFF + + + Sbjct: 217 WELCLSYLAGVIVTATLFSAFGPEGKYAGATFHVLAGFTLIAAFFFMAEDSSTPINLIPM 276 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +I+G AG+L LIR+ G Y DGV +A LL N+ PL+D RP+ G Sbjct: 277 VIYGVGAGVLTILIRNIGNYADGVIYAFLLMNVLNPLLDN-IRPKALGKV 325 >UniRef50_A7HKQ1 NQR2 and RnfD family protein n=5 Tax=Thermotogaceae RepID=A7HKQ1_FERNB Length = 313 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 41/326 (12%) Query: 20 IMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSAL 79 +M +L A + ++ +G+ + + + + E L K +++ V+ + L Sbjct: 14 MMRKMLWALLFVFIFSVFAYGFKVIWLGIWVFTTGVFVEYLFEKQKRKPVSEAV-----L 68 Query: 80 LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 +T +L +S+PP P+W+ ++G F V K++YGG G+N FNPA++G + + I+FP M Sbjct: 69 VTCMLFLLSLPPNTPFWVAMIGIAFGVAFGKEVYGGFGRNIFNPAIVGRLFIYITFPNYM 128 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAG 199 T G + G D +S ATPL + Sbjct: 129 TM-----------------------------GWVKPSLFGTDAVSSATPLALMRQG---- 155 Query: 200 HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG 259 E + + +G AG+ + L LA V+L+ K W + +S + A L Sbjct: 156 ---ESLNVLNLLTGWRAGSIGEGPILIILAAAVYLIVTKTASWRLMISTYFSAAALTFLL 212 Query: 260 WLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG 319 +F+ +LSG+ + + F+ T+P+TA R + I+G + G +IR+F Sbjct: 213 DVFNVPKALPTIPAILSGSLVFISVFMATEPITAPKKIRSQWIYGIIIGTTGVIIRTFSL 272 Query: 320 YPDGVAFAVLLANITVPLIDYYTRPR 345 + +G +FA+L+ N+ PL+D + + Sbjct: 273 FSEGWSFAILMGNLFAPLLDEVIKDK 298 >UniRef50_A1WUZ1 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUZ1_HALHL Length = 314 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 125/323 (38%), Positives = 171/323 (52%), Gaps = 16/323 (4%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M VLLA +PG +W FG G L+ I A + + AEA L+LR + VA L D S L Sbjct: 1 MGWVLLALLPGAGVLVWLFGVGVLLNITAALTAGVAAEAAALRLRGRPVAPALTDGSTPL 60 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 L++ +++PPL P+W+ L AV++ KQ+YGGLGQN FNPAM+GY+ ++++FP ++ Sbjct: 61 AALIIGIALPPLLPFWIPALAGALAVLLGKQVYGGLGQNIFNPAMVGYLAVVLAFPQAVS 120 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 W P +A+ +G D ++ ATPLD T A Sbjct: 121 LWPAPETGVGAAVPATEALHYFLTGALPPIA---------DAMTHATPLDRLATEGFAAL 171 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 + + A W W+ A L GG LL + + W +P+ LV A A L Sbjct: 172 PGDGGLWGQ----TQAAGAWLWLGAALLLGGAGLLALRIVDWRLPVGVLVGTAATAALLQ 227 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 L A HLLSGAT+L AFFI TDPV+A RLI+ AL G++ +IR GG+ Sbjct: 228 LGDG---APVLFHLLSGATLLVAFFIATDPVSAPREPTARLIYAALIGVVALVIRELGGH 284 Query: 321 PDGVAFAVLLANITVPLIDYYTR 343 PDG AFAVL+ N T PL+DY R Sbjct: 285 PDGFAFAVLMLNATAPLLDYVVR 307 >UniRef50_C1I7V3 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7V3_9CLOT Length = 299 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 59/340 (17%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 +I+ +P+ ++IML ++A +P + A ++F+ + I+ V++++AE L Sbjct: 8 NLKISPAPHVKKGLGINKIMLDFIIALIPAVFAGVYFYKIDAVKVIVATVVTSIIAEGLW 67 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 K K+ + L D S ++ G++LA+ +P P W+ ++G++FA I+ KQ +GGLGQN Sbjct: 68 NKFVKK--TSFLTDLSPIVLGIILALIMPTYIPLWIPIIGSIFATIVVKQFFGGLGQNFM 125 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGID 181 NPA L+ S+ M D Sbjct: 126 NPAAATKAFLIASWAGVMAK------------------------------------PATD 149 Query: 182 GISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIR 241 S A +G + + G G+ + LA GG++L+ + I Sbjct: 150 ATSAA-----------SGSAEVVVPLIDKIIGQANGSIGEVSILALCIGGLYLVLRGRIS 198 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRL 301 P++F+V+ + + + LL GA + A F+ TD T T G+ Sbjct: 199 LRGPIAFIVSAMIMYNIFE----------KDLLLPGAFFVSAIFMTTDYGTTPMTKIGQY 248 Query: 302 IFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 IFG +AG+ +I G P+G +A++++N+ PLI+Y+ Sbjct: 249 IFGIIAGVCAAIIAVKGFNPEGPYYAIIISNLFTPLIEYF 288 >UniRef50_B0MP93 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP93_9FIRM Length = 438 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 126/324 (38%), Gaps = 34/324 (10%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 I +L + F+G + + ++ +L + + L K+ +KD S Sbjct: 33 RSIYGDQILFMLAITVIATCFYGMRVVTVCACSVLACILTDMVGCFLSKKEYG--VKDLS 90 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 + G+ LA+ +P +++V++G V A+ + K ++GG FNPA + L+I +P Sbjct: 91 TIAYGMALALMLPASVEYYVVIIGAVLAITV-KHIFGGKDNYIFNPAAVAIAFLIICYPT 149 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 Q+ + +DA IF + + + + TPL Sbjct: 150 QVLMYPQ-----------LDAHPEIFGDAGTLVSGIESSFIKNGAMPSLTPL-------- 190 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 I G G L + G+ L+ ++++ + + + + + Sbjct: 191 -----------EILMGRFPGPMGTTHILVLIVSGICLICRRSVSLSATVGGIAVMGVLSY 239 Query: 258 LGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 L P + A +SG + G F+ +DP T TN GR+++G G++ + R+ Sbjct: 240 LTSSVEPA-MDAVIFRFISGFVLFGFIFLASDPQTLPFTNGGRVLYGIALGVITVIFRNS 298 Query: 318 GGYPDGVAFAVLLANITVPLIDYY 341 F++L+ N +D Sbjct: 299 ANIEGIFVFSLLIVNALSLYLDKL 322 >UniRef50_C7NCF4 NQR2 and RnfD family protein n=2 Tax=Leptotrichia RepID=C7NCF4_LEPBD Length = 367 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 47/346 (13%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 +I+ +PY + IM V++A P I A +G L+ I ++ +SA+ E + + Sbjct: 12 KISFTPYIRTEVDVRNIMKDVIIALFPAIIASWLVYGIRALLVIAVSVLSAVWTEKIFSR 71 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 + +T ++ SA++TG+LLA+++ P +V G A+I K +YG +G+N FNP Sbjct: 72 VFLNDSEST-QNLSAIITGILLALTLAPFTSLPVVAFGASMAIIFGKLMYGRIGKNIFNP 130 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 A++G + + FPV M+S I + Sbjct: 131 AVVGREFMTVFFPVAMSSGAIWFNKEALKMSNIRFFENF--------------------- 169 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 TP + S+ S A + GG++LL + I WH Sbjct: 170 -SKTPFANYLDSLLLSPSGSLGSY---------------SAFALILGGLYLLLKNRISWH 213 Query: 244 IPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIF 303 IP+S T L M I + G +L F+ TD T+ + G++ + Sbjct: 214 IPVSLFATAFLATMFLKDG---------ISVSIGGVLLIGIFMATDMPTSPMSPAGKVYY 264 Query: 304 GALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 G + G ++ L+ G + +++ +L+ N +I+ RP V+G+ Sbjct: 265 GVMLGAVIVLLTMLGIKNETLSYVLLILNPFAKIINKVFRPVVFGY 310 >UniRef50_C0EE37 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE37_9CLOT Length = 328 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 138/328 (42%), Gaps = 31/328 (9%) Query: 15 RQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL-RKQSVAATL 73 + T +L+ + ++F+G ++ + A++++L+ E K+ + Sbjct: 6 QTTKSQRSDMLITLLAVFVLPIYFYGLRVVIMLGFAALTSLVIEFAAQKIFSSKRKQKFA 65 Query: 74 KDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLI 133 D+++L+T ++ + + AP W+V + ++II K +GG G+N FNPA IG + + Sbjct: 66 YDSTSLITAMICTLLLSAAAPHWLVCVAVALSLIIGKYPFGGTGKNIFNPAAIGLSFVGL 125 Query: 134 SFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFK 193 +P S+ PH V++P F D + PL Sbjct: 126 CWPELTFSYPSPH---VSLPLFGDVMV---------------------------PLVNSP 155 Query: 194 TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 V QI G AG V + A GV++L +++I+ +IP + L+T + Sbjct: 156 EYQLGMGGVPQIRAMDALLGQFAGPIGATVAIVLFACGVYMLIRRSIKIYIPAALLITTS 215 Query: 254 LCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWL 313 + ++L +SG + G+ F+ DP T + G++ FG G L Sbjct: 216 VISLLVPRIHTTPSHILMFEFISGVLLFGSVFMANDPSTIPRSRLGQVYFGVFLGFFTML 275 Query: 314 IRSFGGYPDGVAFAVLLANITVPLIDYY 341 + FG +A+L+AN L D Sbjct: 276 FKYFGINEFDFIYALLIANAMSDLCDKL 303 >UniRef50_A9NEB1 NADH oxidoreductase complex RnfABCDGE type, D subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB1_ACHLI Length = 356 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 96/351 (27%), Positives = 150/351 (42%), Gaps = 55/351 (15%) Query: 6 ASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLR 65 +SPY + T R+M VL+A P + ++ FG L +IL++ + + EAL Sbjct: 9 QTSPYIRKETSTKRMMFDVLIALTPVVFFSIYRFGLDALARILVSLIIFVGVEALYFLSV 68 Query: 66 KQ-------------SVAATLKDNSA-LLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQ 111 + ++ + SA ++ ++ A+ +P ++VV+G +F I K Sbjct: 69 TRVDGYNFKDKIKNKFKKYSINNFSAPAVSAVIYAMLLPNQLHLYVVVMGALFGAAIGKM 128 Query: 112 LYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGG 171 ++GGLG N FNPA G V + ++F T Sbjct: 129 IFGGLGMNIFNPAAAGRVFIALAFTTFFTG------------------------------ 158 Query: 172 DMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGG 231 ID + AT L T + + G + G+ + +LA L G Sbjct: 159 ----SYGFIDAAAGATALST-----SFPEVLNSYSLIDLLVGNIPGSMGEINSLAILFGL 209 Query: 232 VWLLWQKAIRWHIPLSFLVTLALCAMLGWLF--SPETLAAPQIHLLSGATMLGAFFILTD 289 +LL +K+ + LS L+ A + LLSG + G F++TD Sbjct: 210 AYLLIRKSADYRPVLSGLLIFTALATVAGFILHPTLVFEYVIFQLLSGGLLFGLTFMITD 269 Query: 290 PVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDY 340 P T+ T GR FG + G LV+ IRSFG P+GVAFA+L N+ VPL+DY Sbjct: 270 PATSPITRPGRWWFGLIVGSLVFFIRSFGSLPEGVAFALLFGNLMVPLLDY 320 >UniRef50_Q12W78 Electron transport complex protein rnfD n=2 Tax=Methanosarcinaceae RepID=Q12W78_METBU Length = 309 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 93/350 (26%), Positives = 149/350 (42%), Gaps = 67/350 (19%) Query: 1 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60 M F I++ P+ +IM +LA +P + ++ FG + + + +A+ EA Sbjct: 1 MTFTISAPPHKKENITFKKIMWAKVLALMPVVLLSVYLFGLPAIGLVAASIFAAIATEAT 60 Query: 61 VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120 + K Q + T+ D A+L GL++A+ IPP P W+ ++GTVFAV I K +GG+G Sbjct: 61 IQKAFGQKI--TIADGHAVLIGLMVAMIIPPEVPLWIPMIGTVFAVGIGKHAFGGIGSYV 118 Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180 FNP + ++ L +++ M P A+ + Sbjct: 119 FNPVLAAWLFLSLAWGSIMAPASYPQTSALFELVLENGA--------------------- 157 Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240 G++AG ++ LA G L++++ I Sbjct: 158 --------------------------------GVMAGVSPFFILLA----GAVLIFRRYI 181 Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 W IP++F VT L A L +++ G + G FI TD T+ TT GR Sbjct: 182 EWRIPVTFFVTTVLLAFLLG--------DSLSYVVLGVVVFGVLFIATDTSTSPTTKNGR 233 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350 +I+G + G+LV + F Y DG + + LAN LID T P YG Sbjct: 234 VIYGIVCGVLVVVYGHFANYVDGTFYGLFLANCVASLIDNNTLPASYGTE 283 >UniRef50_C3X8F5 Electron transport complex n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8F5_OXAFO Length = 337 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 93/331 (28%), Positives = 145/331 (43%), Gaps = 53/331 (16%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 M VL A +P FG ++ IL+A SA+ E L +L A+L D SAL+ Sbjct: 1 MADVLFALLPVCFMAWLAFGMEPVMVILVACGSAVATEFLFSRLYVGK-TASLSDGSALV 59 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 TG LLA ++ P P ++V G AV+ K L GGLG+N FNPA++G + + FP MT Sbjct: 60 TGTLLACTLAPFTPLYIVAFGGAMAVLFGKLLAGGLGRNRFNPALVGREFMTVFFPAIMT 119 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 S + +D + F Sbjct: 120 SGAIWYRYDAVHVSSLDWLPDTF------------------------------------- 142 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 +GA ++ + + GGV+LL + I WHIP++ V+ + ML Sbjct: 143 -------LDSLIFRGSGAIGEYSVVLLVLGGVYLLLKNRISWHIPVALTVSFTVLFMLL- 194 Query: 261 LFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGY 320 + +LGA F+ TD T+S+T GRL +GA+ G + + +FG Sbjct: 195 -------PDGEYRFSLAGVLLGAIFMATDMPTSSSTFIGRLYYGAMIGAVAVMCIAFGVK 247 Query: 321 PDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + +++++LL N V +D+ RPRV+G + Sbjct: 248 HEYMSYSILLLNAFVVPVDWVFRPRVWGGKN 278 >UniRef50_A4MZD3 Electron transport complex protein RnfD n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD3_HAEIN Length = 221 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 105/216 (48%), Positives = 141/216 (65%), Gaps = 6/216 (2%) Query: 139 MTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRA 198 MT+W+PP + P F DA +IFSG T G ++ L IDGI+QATPLD+ K ++ Sbjct: 1 MTTWIPPINLLQEPPTFSDAFSLIFSGLTTDGFTLSQLTHNIDGITQATPLDSAKIFYKS 60 Query: 199 GHSVE---QIMQYPIYSGILA--GAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 + ++++ PI+ G GW +N+A+LAGG++L+ ++ I W IP++ LVT Sbjct: 61 HTQLNDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRVIHWQIPVAMLVTFF 120 Query: 254 LCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWL 313 A F+ T + L+SGA M GAFFI TDPVTAS T RG++IFGAL GL V+L Sbjct: 121 CLAT-ATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYL 179 Query: 314 IRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349 IR G YPDGVAFA+LL+NI VPLID+YTRPRV G+ Sbjct: 180 IRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGY 215 >UniRef50_A8S6D0 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D0_9FIRM Length = 339 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 90/348 (25%), Positives = 139/348 (39%), Gaps = 44/348 (12%) Query: 12 HNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAA 71 ++T R V VP + +F+G L+ +A ++ L + LV LR + Sbjct: 11 RQLQKTGRYYKHVFWLCVPLLCMACYFYGARPLLLCGIALLTGNLCDRLVALLRHR--VY 68 Query: 72 TLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVL 131 T +D S L++A+ +P +++V+ + V+I K+++GG G PFNPA +GY V Sbjct: 69 TNRDFSNESFSLIIALLMPATVDIYVLVVAVLAGVLIGKEVFGGYGSYPFNPAAVGYAVA 128 Query: 132 LISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDT 191 +S+P Q+ + P+ + SGG +N L + Sbjct: 129 AVSWPEQVVRYPQPYTPLPLWNASAVPVSSTIEDTLRSGGILNLNALAV----------- 177 Query: 192 FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 G A L LA G+ L QK + SFL+T Sbjct: 178 -------------------VLGEFAAPMGTGAALVILACGLVLWTQKDVHIGASASFLIT 218 Query: 252 LALCAMLG----WLFSPETLAAPQI-------HLLSGATMLGAFFILTDPVTASTTNRGR 300 L A L ++ L +GA + A F+L +P T + GR Sbjct: 219 CGLIAFFFPRQVGLADSTLFSSLLPRLQGIRDELHTGAVLFCAVFLLNEPYTCAHHRLGR 278 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYG 348 +++GAL G R FG Y GV FA+L N LID T R+Y Sbjct: 279 ILYGALVGAATMGFRYFGVYETGVCFALLAVNSVSALIDR-TEERLYR 325 >UniRef50_A9NGU6 Na+-transporting NADH:ubiquinone oxidoreductase subunit B n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU6_ACHLI Length = 315 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 49/333 (14%) Query: 24 VLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGL 83 V A + A + FG + LA +++ + E L K RK T S +T L Sbjct: 11 VASALFILLIAASFIFGATVFIVGALAILTSFVVEILSTKARK----ETFDWTSFWITPL 66 Query: 84 LLAVSIPPLA--PWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTS 141 ++ + P WMV + T F V AK ++GG +N FNPAM+G + + ++FP+ + + Sbjct: 67 VITLLTTPTIIDQVWMVSIATAFGVFFAKSIWGGQDKNVFNPAMVGLIFIALAFPIYVNN 126 Query: 142 WLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHS 201 +L P + + G Sbjct: 127 FLEPVSGLASPQTLATIFKN-----------------------------------SPGQI 151 Query: 202 VEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAML--G 259 + + + G AGA L + G+ ++ + W IPL+F+ T + +++ Sbjct: 152 MTTYSLWDVLLGNYAGAIGTTFKLGIIILGLLMMVVRISDWRIPLTFVGTYFVLSLINGF 211 Query: 260 WLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG 319 +L G M F+ TDP TA N+G+ I+G G + W+I++ Sbjct: 212 TKTGVNPFMYATYSILMGHLMFAVMFVSTDPQTAPLYNKGKFIYGIGLGFITWIIQNIWV 271 Query: 320 Y------PDGVAFAVLLANITVPLIDYYTRPRV 346 + +G+ ++V N V LID +T P+V Sbjct: 272 FNPLAPNTEGIIYSVTFMNAVVGLIDVWTVPKV 304 >UniRef50_Q73MW5 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema denticola RepID=Q73MW5_TREDE Length = 344 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 134/345 (38%), Gaps = 24/345 (6%) Query: 2 VFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALV 61 + ++P+ + + +I ++VL I L+ I++A + L E L+ Sbjct: 6 NLSLTAAPFVYTRLPIFKINIVVLSLLGIQILILALSADLYALLNIVIAVMGVLFVENLL 65 Query: 62 LKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 L +L+ +++GLL+ +P + V + + F+V I K ++GG G+N Sbjct: 66 RYLASSKFGLSLE---MIISGLLIGFFMPTGIGFVFVFILSAFSVFIVKTVFGGTGRNWL 122 Query: 122 NPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI- 180 NP IS P + + F ++ + + + I Sbjct: 123 NPVAFAVCAAYISRPEAFPPLISDFSLLAEKGSFFAVMEANGLLKLKTDFTITSALNSIL 182 Query: 181 -DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKA 239 G+ P + + S+ N+ L + L +A Sbjct: 183 LHGVGVTLPEGYISLFLNSTSSIPAFRY----------------NIVTLVSSIILFSIRA 226 Query: 240 IRWHIPLSFLVTLALCAMLGWLFSPETL---AAPQIHLLSGATMLGAFFILTDPVTASTT 296 + + +P FL T A+ + + + +L+G + AFF++T+P ++ T Sbjct: 227 VDYILPAFFLATYAVLVWIFGMAPVSNIYFTGDILSAVLTGGILFAAFFVMTEPASSPKT 286 Query: 297 NRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYY 341 G+ + G G+ + I + G P G+ FA++L NI PLI+ Sbjct: 287 KYGKAMIGFFTGVFAFFICAHGASPAGIFFAIILGNIISPLIERL 331 >UniRef50_C7NE07 NADH:ubiquinone oxidoreductase subunit RnfD-like protein n=2 Tax=Leptotrichia RepID=C7NE07_LEPBD Length = 345 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 129/340 (37%), Gaps = 53/340 (15%) Query: 12 HNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAA 71 Q ++ + +L++ +P + + ++ ILL+ +A L + + + +++ Sbjct: 8 KQQENIAKTNIDILISLIPMLLVAFAAYEVTPVLVILLSIAAAELVDIIFSLILQKN-KE 66 Query: 72 TLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVL 131 TLKD S + G L + P P ++ A + K +YGG+ + FNP + G + + Sbjct: 67 TLKDLSGINIGALTGFVLAPFTPLYVAAFAGAMATLFGKVMYGGIDKKVFNPVIWGKLFV 126 Query: 132 LISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDT 191 L FP + ++ D Sbjct: 127 LTFFPAVLAP-------------------------------NSSAWTNPDIF-------- 147 Query: 192 FKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 E++ + I G + +A + G ++LL++ I WHIP+SF +T Sbjct: 148 -------KLPSEEVTGLTSFLVINKGIIGELSIIAMILGAIYLLFRSRITWHIPVSFFIT 200 Query: 252 LALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLV 311 + + + + G + F+LTD T G++ FG LAGL Sbjct: 201 IFFGYYIASNNNINVVTT------LGEIIFMGIFVLTDSFTTPQHGFGKVFFGFLAGLST 254 Query: 312 WLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + G + + ++VL+ N I+ +P V+G K Sbjct: 255 IIFWFLGIQTEAIIYSVLILNPFTRPINTIFKPNVFGDEK 294 >UniRef50_C8PP64 NQR2/RnfD/RnfE family protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PP64_9SPIO Length = 340 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 72/352 (20%), Positives = 134/352 (38%), Gaps = 23/352 (6%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLK 63 ++ +PY + +LVL + A + ++ I+ + ++ LA LV Sbjct: 7 TLSPAPYIYTGLNARHTAILVLSLLSLQLIAMGIMHDFASIFLIISSGAASTLAAFLVGY 66 Query: 64 LRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNP 123 ++ + + D AL+TGLL+ +P + + L + + ++GG G + NP Sbjct: 67 IQGKKI----FDIHALITGLLIGFFLPVNSGFVFSFLIAFMSYFFSWGIFGGKGFSWVNP 122 Query: 124 AMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGI 183 M+ + + P + I +F+ +SG + + Sbjct: 123 VMLAACIASVCKPEYFVQPVGFDRIVSG--------GSVFAAMESSGLLQTPADQYVTSM 174 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWH 243 +T L + ++ G ++ + NL L + LL K I Sbjct: 175 FNSTFLHSVGVTLPEG-------YISLFLHHPSAIPAFRYNLLTLGASIILLSAKTIHKT 227 Query: 244 IPLSFLVTLALCAMLGWLFSPETL---AAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300 +P +FL+ L L +L+ + AFF++ D + + GR Sbjct: 228 LPFTFLIVYGLLVYLFPSAGQANALGRGDVLSAILTSGALFSAFFVMNDGGSTPRSWEGR 287 Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG 352 + G L G+ + I G P G+ FAVLLA+ PLI+ + Y R+G Sbjct: 288 CLTGILTGIFAFCITGPGAIPAGIPFAVLLADCINPLIE-WLESSFYKRRRG 338 >UniRef50_D1RAM2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAM2_9CHLA Length = 512 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 19/231 (8%) Query: 134 SFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFK 193 ++P + + + N + S + L G G+S D ++ Sbjct: 280 TYPTIQEKFAEWNAHSANQATLGE-----LSQEQMKNFVTSPLTEGGLGLSPGYYEDAYQ 334 Query: 194 TSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLA 253 S + + G G + LA + G + L++ W ++ + + Sbjct: 335 FSALDHGIGSTNNDWGFFFGNKLGCMGETSTLACILGAILLIYTGVGAWRTMVAMALGMY 394 Query: 254 LCAMLG-----------WLFSPETLAAPQI-HLLSGATMLGAFFILTDPVTASTTNRGRL 301 L A+ ++P T P HLL G G F+ TDPV++ + + + Sbjct: 395 LTALFFEFGSSFFAGAQGSWAPATFGFPAYKHLLLGGAAFGIVFMATDPVSSPSLDSAKW 454 Query: 302 IFGALAGLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 I+G G++ LIR YP+GV A+L+ N+ PL DYY R Y R+ Sbjct: 455 IYGLFCGIVTMLIRVVNPAYPEGVMLAILMGNVFAPLFDYYAA-RFYRKRR 504 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 84/233 (36%), Gaps = 62/233 (26%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGT--------------------- 43 P+ + R ML+V+ A +P I +W G + Sbjct: 40 TKVGPHIRDAIDVKRWMLIVVFALIPCILMAIWNTGLQSFVYSSGNYQLMNEFLSSSTSF 99 Query: 44 ------------------------LVQILLASVSALLAEALVLKLRKQSVAATLKDNSAL 79 L Q L+A L E + +R+ ++ L Sbjct: 100 QGYFDFALKDNRYLTILKEGLYALLPQALIAYAVGGLWEGIFACVRQHEIS-----EGFL 154 Query: 80 LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 +TG+L A+ +PP P+WM +G +I AK+++GG G N NPA+ L ++P +M Sbjct: 155 VTGILYALILPPTLPYWMTAVGVSVGIIFAKEVFGGSGMNIVNPALACRAFLFFTYPGRM 214 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 + + + + ++ +DG +QATPL F Sbjct: 215 SGNVWVGT------------DATKVRESLIAMNQDSKASTLDGYTQATPLAKF 255 >UniRef50_UPI0001C372ED NADH:ubiquinone oxidoreductase, RnfD subunit-like protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372ED Length = 318 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 117/320 (36%), Gaps = 37/320 (11%) Query: 18 SRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNS 77 I L ++ +++G LV ++ ++AL AE + L+L + + A D S Sbjct: 5 RYIWLDKMITLATLALMAFFYYGTHFLVTAVICVLTALAAEFVSLRLMHKKIDA--DDLS 62 Query: 78 ALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPV 137 L++A+ +P + + L +F ++AK ++GG F+PA Y+ +L S+ Sbjct: 63 CTSDALIIALMMPASINYLIAALAVIFGTVVAKDVFGGRQNMVFSPAAAAYIFVLTSWGR 122 Query: 138 QMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVR 197 + + PH +D + +G Sbjct: 123 DLLMYPAPHVHTGIAGKAVDLVNSASHTFNMTGK-------------------------- 156 Query: 198 AGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAM 257 + I G +G L V L+++K I + ++ A A Sbjct: 157 -----MDYTDFEILMGNFSGPCGAVSILLLTVAAVMLIFRKDISFGAFFGTIIGTAAFAY 211 Query: 258 LGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSF 317 + + + + + + L++ + A FI++D A +G G+ +++ Sbjct: 212 ITPMIN-DRTDSVKYSLVTNMVLFAAVFIVSDLRIAPRKWYFAFFYGLFIGIFSYILVLT 270 Query: 318 GGYPDGVAFAVLLANITVPL 337 + V V+++ + PL Sbjct: 271 TAKENAV---VIMSVLFTPL 287 >UniRef50_UPI0001698867 electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698867 Length = 194 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 2/135 (1%) Query: 5 IASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKL 64 + ++P+ H +IM V+ A +P +W FG L +L ++S LL E L ++ Sbjct: 9 LRTTPHAHAADDVVKIMRNVVYALLPITIWSVWQFGLSALALLLTVTLSCLLFERLFNQM 68 Query: 65 RKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPA 124 R + ++L D SA +TGLLLA+++PP P WM V+ A+ + K L+GGLG N NPA Sbjct: 69 RGEP--SSLGDWSATITGLLLALTLPPGFPLWMGVVAAFAAIALGKALFGGLGMNVLNPA 126 Query: 125 MIGYVVLLISFPVQM 139 ++G + +FPV + Sbjct: 127 LVGRAFVQAAFPVAI 141 >UniRef50_D1PJN0 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN0_9FIRM Length = 339 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 125/331 (37%), Gaps = 45/331 (13%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 +L AVP +++G ++ +L + A L + + L + + + S+ Sbjct: 16 YRDLLWCAVPLTGMAWYYYGPRPVLLMLTGLLVAYLCDCALAPLHGEGYHSH--EPSSEC 73 Query: 81 TGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT 140 L+ + +P P+ VV+ V A ++ K+ +GG G PF+PA +G V IS+P + Sbjct: 74 FAALIVLMMPATVPY-AVVVAAVIAAVLVKEAFGGEGHYPFHPAAVGMAVAGISWPDSVY 132 Query: 141 SWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGH 200 + P +P F + + G A+ Sbjct: 133 RYPTPGT---WLPVFGASDGTLVEGMNAT---------------------------LRNG 162 Query: 201 SVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGW 260 + + +G ++G L +A G++LL + IR + + FL+ L Sbjct: 163 GLPSASTMNLLTGNVSGGLGITAALVVMACGLFLLVRGHIRLSVLIPFLIFCIGLPWLLP 222 Query: 261 LFSPETLAAP------------QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAG 308 S + + + +LSG + G F++ +PVT R+++G G Sbjct: 223 QLSELPVFSWPWEYVRQRIYLEKYVILSGTVLFGGLFLICEPVTMPNRTSSRIVYGTALG 282 Query: 309 LLVWLIRSFGGYPDGVAFAVLLANITVPLID 339 + R F Y FA+L+ +D Sbjct: 283 IATHAFRVFSPYESAACFALLIVGAIPEWLD 313 >UniRef50_UPI00017427D7 electron transport complex protein RnfC n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427D7 Length = 501 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 +PY + + IM V+++ P I A +G L+ I + +SA++ E L K Sbjct: 386 TPYIRTEIEVRNIMKDVIISLFPAIIASALVYGTRALLLIAFSVLSAVVTEKLFSKYFLN 445 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPF 121 ++ D SA++TG+LLA+++ PL P +V+ G AVI K +YGG+G+ Sbjct: 446 D-NNSVHDLSAVITGILLAMTLAPLTPLPIVIFGACMAVIFGKLIYGGIGKTFL 498 >UniRef50_B2S298 Hypothetical integral membrane protein n=2 Tax=Treponema pallidum RepID=B2S298_TREPS Length = 339 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 116/339 (34%), Gaps = 35/339 (10%) Query: 8 SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 +P+ + + VLLA + + + ++++ L+ ALV LR Sbjct: 9 APFLYTGLSAGQ-NNSVLLALLVAHVFVVAAMRDTVALFSIVSTELGALSAALVQTLRTP 67 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 V + +L+ GLL+ +P + AV + L+GG N NP + Sbjct: 68 HVPLS----DSLVLGLLIGAVLPAHNSFLNTFCVAFCAVFFTRVLFGGKIGNWLNPIALA 123 Query: 128 YVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQAT 187 V+L + + + + A NT Sbjct: 124 PVLLRLCTEGTSLPTSGRVSVVQGAMSYPLFYSALVEWDAAVRTWCNT------------ 171 Query: 188 PLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLS 247 + G ++ + A G+++ L LA + R+ + Sbjct: 172 -----QVFQPLGLTLPEGALSACVFTQAAAPGFRYPVLTLLAALCVYAVRAR-RYICSCA 225 Query: 248 FLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 FLV + L P TL + L+ + AFF+L +P T+ TN G I G L Sbjct: 226 FLVVYSTLFFLPAHAHPATLVS----LIKSGALFTAFFVLPEPDTSMRTNGGAWISGGLC 281 Query: 308 GLLVWLI--------RSFGGYPDGVAFAVLLANITVPLI 338 + + + +G + + A+LL NI PLI Sbjct: 282 AMCAFFLAKKNSSAPDMWGAHDMHLWSAILLTNIVQPLI 320 >UniRef50_Q3KM84 Na(+)-translocating NADH-quinone reductase subunit B n=14 Tax=Chlamydiales RepID=NQRB_CHLTA Length = 503 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 80/216 (37%), Gaps = 49/216 (22%) Query: 4 RIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL------------------- 44 +S P+ + R M+LV++A +P I A +W G L Sbjct: 38 TPSSPPFVRDAVDVKRWMMLVVIALMPTIFAAVWNSGLQALVYQSSDPRIMEAFLHISGF 97 Query: 45 -------------------------VQILLASVSALLAEALVLKLRKQSVAATLKDNSAL 79 + ++ E L +RK +A L L Sbjct: 98 KSYFSFVSQEIGIGSVLFAGCKIFLPLLFISYAVGGTCEVLFAIIRKHKIAEGL-----L 152 Query: 80 LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 +TG+L + +PP P+WM LG F V++ K+L+GG G N NPA+ G L +FP +M Sbjct: 153 VTGMLYPLILPPTIPYWMAALGIAFGVVMGKELFGGTGMNILNPALTGRAFLFFTFPAKM 212 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNT 175 + + I + + + G +T Sbjct: 213 SGDVWVGSNPSRIKESLATMSSLAEKSHFDGFSQST 248 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 14/165 (8%) Query: 200 HSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLG 259 + + + ++ G + G+ + +A L G LL W LSF ++ A Sbjct: 339 YGIGKFSTGNLFFGNILGSLGETSTVACLLGAGLLLLTGIASWRTMLSFGLSAFFFAWFF 398 Query: 260 -----------WLFSPETLAAPQI-HLLSGATMLGAFFILTDPVTASTTNRGRLIFGALA 307 ++P P HL G G F+ TDPV++ + ++GA Sbjct: 399 KIMSILTTGNAGAWAPAKFFIPAYRHLCIGGLAFGLVFMATDPVSSPAMKLAKWLYGAFI 458 Query: 308 GLLVWLIRSFG-GYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 G L LIR YP+GV A+LL N+ PL D + Y R+ Sbjct: 459 GFLTILIRLINPAYPEGVMLAILLGNVFAPLFDN-IALKQYRQRR 502 >UniRef50_B5RQQ1 Uncharacterized conserved protein n=24 Tax=Borrelia RepID=B5RQQ1_BORRA Length = 771 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 111/308 (36%), Gaps = 29/308 (9%) Query: 11 THNQRQTSRIMLLVLLAAVPGIAAQLWF---FGWGTLVQILLASVSALLAEALVLKLRKQ 67 + + I L+ +LA +P + F +++ I+ + S + + L+ + Sbjct: 413 IYTENNLKDIYLITILALIPNLIFSFANNIKFLIDSIILIITSLCS-----YIPIMLKSK 467 Query: 68 SVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIG 127 + +AL+T ++L ++ P + +F + + L + NP +I Sbjct: 468 YRYFSFFIYTALITNIILPLNFPITLK-----IMAIFFTFLMFFYFSRLSKLLINPILIS 522 Query: 128 YVVLLISFPVQM--TSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDM--NTLRLGIDGI 183 ++ LL++FP+ T + + IP + I + H ID I Sbjct: 523 FIFLLLNFPLSFKQTYYKELVKQNDIIPTWNKIISKNTNIHNLEKLKEFKRHENKYIDII 582 Query: 184 SQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQ--WVNLAWLAGGVWLLWQKAIR 241 K S IM + L G + + G ++L + I Sbjct: 583 D--------KFINEQVLSHLNIMIPRFHIENLLGFQNEKYLSPILIYIGFSFILKKFIIN 634 Query: 242 WHIPLSFLVTLALCAMLGWLFSPETLAAP--QIHLLSGATMLGAFFILTDPVTASTTNRG 299 IPLSF ++L A + S + ++S M+ F + T+ TA Sbjct: 635 KLIPLSFYISLLFIAYILQNLSLYNYISFDILSLIMSPIPMILVFTMGTELQTAPHFKFE 694 Query: 300 RLIFGALA 307 ++++G Sbjct: 695 QILYGFAL 702 >UniRef50_Q8YVI1 Alr1997 protein n=17 Tax=Cyanobacteria RepID=Q8YVI1_ANASP Length = 300 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 4/123 (3%) Query: 216 AGAGWQ-WVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHL 274 G + W G ++ Q+ RW +FL + +L + L+ T L Sbjct: 146 PGRWGEEWWYGLLFVGAGGMILQRIGRWDTTAAFLGSYSLLEAMRNLWLGWTWDVYWHRL 205 Query: 275 LSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT 334 +SG+ +L A F++TDP + GR+++ + +++R++ P V F VL A Sbjct: 206 MSGSLLLFALFMITDPRSIPNARIGRIVWAFSIAIFTFILRNYFFVPTAV-FWVLFA--F 262 Query: 335 VPL 337 PL Sbjct: 263 APL 265 >UniRef50_A7BVL8 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVL8_9GAMM Length = 267 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 5/160 (3%) Query: 195 SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLA---GGVWLLWQKAIRWHIPLSFLVT 251 + +M + G L +L GG+ L + F T Sbjct: 110 FNPTTFGLVTMMLLTGQVWVSPGQWGSTAFLGFLIACLGGLVLNRAARSDVTLAFLFFYT 169 Query: 252 LALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLV 311 L W P T+ P L +GA +L AFF+++DP T + GR++ L + Sbjct: 170 AILFGRALWFGDPLTI--PLHQLENGALLLFAFFMISDPKTTPDSRAGRILLAFLVAVGA 227 Query: 312 WLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRK 351 + + +GV +++ L + VPLID+ Y ++ Sbjct: 228 GFVHFWLYRTNGVFWSLALFALFVPLIDWLLPGNRYQWKR 267 >UniRef50_A9D761 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D761_9RHIZ Length = 272 Score = 81.1 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 10/190 (5%) Query: 165 GHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVN 224 + L + + + + + G+ Q + Sbjct: 86 APADAALWQVALAVSFGVVFGELVFGGRGYGFLSAAAAALGFFVFSFPGVQLSGAGQGLG 145 Query: 225 LAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAF 284 L + G + LL + W + L+T L +L L+ + Q G Sbjct: 146 LTVIPGALVLLVGGLVSWRV----LLTAGLVVILPGLWDGGLSGSWQ---TCAGIAFGLV 198 Query: 285 FILTDPVTASTTNRGRLIFGALAGLLVWLIRSF---GGYPDGVAFAVLLANITVPLIDYY 341 F++ DPV ++TN GR +G LAG L+ L + G P + FA LLA+I PLIDY Sbjct: 199 FLVGDPVVTASTNPGRWAYGILAGGLIVLFDTISGPGVSPTAIVFAALLASIFAPLIDYL 258 Query: 342 TRPRVYGHRK 351 HR+ Sbjct: 259 VVEWNVRHRR 268 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 5/144 (3%) Query: 20 IMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSAL 79 I L+ L+A VP +A + G G L ++ A + +L E LR ++ + Sbjct: 22 ITLIQLIALVPPVAVTVLERGAGQLAVLIAALIVSLGWELAFALLRGRAPS-----WHGA 76 Query: 80 LTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQM 139 L+ AV P A W V L F V+ + ++GG G + A + SFP Sbjct: 77 SVALIFAVMAPADAALWQVALAVSFGVVFGELVFGGRGYGFLSAAAAALGFFVFSFPGVQ 136 Query: 140 TSWLPPHEIAVNIPGFIDAIQVIF 163 S IPG + + Sbjct: 137 LSGAGQGLGLTVIPGALVLLVGGL 160 >UniRef50_C4GIQ6 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIQ6_9NEIS Length = 899 Score = 80.7 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 91/286 (31%), Gaps = 75/286 (26%) Query: 32 IAAQLWFFGW-GTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIP 90 +A + F+G+ + QI V+++L + + + ++ L SA +TG L++ Sbjct: 24 LAFGILFWGFNRSPWQIAAIVVTSVLTDLTLHTILRR--TTPLFPLSAAITGTSLSMLTN 81 Query: 91 PLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAV 150 W +L FA+ +K L+ G++ +NP++ G V L +T Sbjct: 82 FAHGIWFALLPPFFAIA-SKYLFTVNGKHIYNPSLFGIVAALFFGGGMITPSPAYQWGGS 140 Query: 151 NIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPI 210 + F A I + ++ + Sbjct: 141 GVVAFFVATAAI---------------------------------MLVRVNIHRAWLIGS 167 Query: 211 YSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAP 270 + A + R HIP L A + +LF Sbjct: 168 FLLFYAAQVGFRAYIL--------------RHHIPAETLFMGAFTSPAFYLF-------- 205 Query: 271 QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRS 316 FF+L DP T+ ++ +G++ ++ +I Sbjct: 206 ------------VFFMLPDPPTSPSSKKGQI----GMAAIIVVIDL 235 >UniRef50_A9DQU2 Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DQU2_9RHOB Length = 268 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 5/135 (3%) Query: 7 SSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRK 66 P+ +R+ L+ LLA + + A + G+ L + LA V A L KLRK Sbjct: 4 PPPFLSRPWDGNRLTLVTLLAILAPLTASIVAHGFARLAALALALVLAALWHLAFAKLRK 63 Query: 67 QSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMI 126 + + ++T ++ +P W + F +++ + ++GG G+ +PA + Sbjct: 64 RP-----PEWGGIVTAMIFVTLVPATVLLWQQGVALSFGLVMGELIFGGRGRGFLSPAAV 118 Query: 127 GYVVLLISFPVQMTS 141 LL SFPV Sbjct: 119 SLAFLLFSFPVDAAQ 133 Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Query: 232 VWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPV 291 V L+ + W + + F V +A CA S + S +LG F++ DPV Sbjct: 148 VLLVIAGILSWRLVIGFSVAVAACA------SQWPVPTIWPSWPSATLILGLVFLIGDPV 201 Query: 292 TASTTNRGRLIFGA 305 A+ TN GR ++G Sbjct: 202 AAACTNAGRWLYGF 215 >UniRef50_UPI00016996B3 hypothetical protein Epers_17019 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016996B3 Length = 89 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 39/75 (52%), Positives = 52/75 (69%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALL 80 ML V+LA +PGI A + FFGWG L+ ++A SALL EAL L+LRK+ V L D SA++ Sbjct: 1 MLQVVLALLPGILAMVIFFGWGVLINSVIAIASALLFEALALRLRKRPVTPALMDLSAVV 60 Query: 81 TGLLLAVSIPPLAPW 95 T +L A++ PPL P Sbjct: 61 TAMLFAIAAPPLLPL 75 >UniRef50_UPI0001698C61 Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698C61 Length = 105 Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 40/71 (56%) Query: 209 PIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLA 268 G G GW+WV ++ GG+WL++++ I WHIPLS L A+L +LF PE+ Sbjct: 8 NPLWGDFGGQGWEWVGNWFIMGGLWLIYKRVISWHIPLSLFAGLFSLALLFYLFDPESHP 67 Query: 269 APQIHLLSGAT 279 P H+ SG Sbjct: 68 FPLFHIFSGGV 78 >UniRef50_A5EU44 Putative uncharacterized protein n=2 Tax=Bradyrhizobium RepID=A5EU44_BRASB Length = 274 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 1/136 (0%) Query: 216 AGAGWQWVNLAWLAG-GVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHL 274 G + A LAG L+ + R I + F + A +L + + +A P L Sbjct: 130 PGQWGAEIWFATLAGLFAILVLSASHRVDIAIYFFASHAALLLLRAAWLGDPIAIPLHQL 189 Query: 275 LSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT 334 SG+ ++ FF+++DP T + GRL+F + + + A++ + Sbjct: 190 QSGSLLIFTFFMISDPRTTPDSRVGRLLFAVTVAVAAHYLAFVLQMRPALYVALIALSPL 249 Query: 335 VPLIDYYTRPRVYGHR 350 ++D + R Sbjct: 250 THVLDRLVPAARFSWR 265 >UniRef50_Q1CWI3 FG-GAP repeat protein n=2 Tax=Myxococcales RepID=Q1CWI3_MYXXD Length = 955 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 94/287 (32%), Gaps = 75/287 (26%) Query: 33 AAQLWFFGW-GTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPP 91 FFG+ + Q+ V+ + + + K+ L SA ++ LA+ + Sbjct: 49 VLGFTFFGFNRSPWQMAAIVVTGSVLDVALGWGLKRQKVVPL---SAYISCCSLALLLNY 105 Query: 92 LAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVN 151 W+++L FA+ +K + G++ FNP+M G + L+ +T Sbjct: 106 SHSSWLLLLPVWFAIG-SKYVLTFQGRHVFNPSMFGVAMSLLFTRELIT----------- 153 Query: 152 IPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIY 211 A P + A + + ++ Sbjct: 154 ----------------------------------AAPAYQWANGEVALSAFILMAALVLF 179 Query: 212 SGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIP--LSFLVTLALCAMLGWLFSPETLAA 269 G GW V+ + L +R H+P + FL TL + Sbjct: 180 F-FRVGRGWLVVSFLFFYALQTALRAYVLRHHLPPEVLFLGTLGAPSFF----------- 227 Query: 270 PQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRS 316 + F++LTDP T+ T RG+++ L+ ++ Sbjct: 228 -----------IFVFYMLTDPATSPGTRRGQILLALAVTLVDLVLHF 263 >UniRef50_UPI0001699E71 hypothetical protein Epers_14217 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699E71 Length = 111 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 18/117 (15%) Query: 135 FPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKT 194 FP+ MT+W P + F +S ++ D ++ A+PL K Sbjct: 1 FPIAMTTWYPAQG------------REHFFDLYSSTFAAPLMQGTWDSLTTASPLGMMKF 48 Query: 195 SVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVT 251 + + ++ G AG+ + L + GG+WL W++ + W IP+S VT Sbjct: 49 E------HQSSEFWSLFIGNTAGSLGETSGLLLMLGGLWLWWRRDLDWRIPVSIFVT 99 >UniRef50_C0B3W9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B3W9_9ENTR Length = 67 Score = 51.8 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 26/47 (55%), Positives = 37/47 (78%) Query: 21 MLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQ 67 ML V LAA+PGI +Q++FFG GT+ QI+LA + AL+ E L +KL+K+ Sbjct: 1 MLWVTLAALPGILSQIYFFGLGTIYQIVLAIIVALVTETLCVKLKKR 47 >UniRef50_A4AIL5 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIL5_9ACTN Length = 502 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 71/203 (34%), Gaps = 12/203 (5%) Query: 20 IMLLVLLAAVPGIAAQLWFFGWGTL----VQILLASVSALLAEALVLKLRKQSVAATLKD 75 + LV ++ + A + + + +L + A+ L + + V Sbjct: 14 MYKLVWISLMIVAVAAIALSFFDLVSPDPFALLASLPVAVGFSYLASMIGARIVRQRAHL 73 Query: 76 NSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIA---KQLYGGLGQNPFNPAMIGYVVLL 132 S+L+TGLL+ + P M +LG A IA K L G++ FNPA +G + Sbjct: 74 ESSLITGLLVFFIMAPSLEL-MGLLGIALASTIAGASKFLIAFRGRHIFNPAALG-AYVF 131 Query: 133 ISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTF 192 I P+ +W + + + + + G + I A L + Sbjct: 132 IFAPLGFPTWWVGTPLLQPLIVIAAFLILYRTRRLDLGLVFIVVASSIRI---ALSLASG 188 Query: 193 KTSVRAGHSVEQIMQYPIYSGIL 215 T A Q + G + Sbjct: 189 GTFTDALSFTFASSQLIFFVGFM 211 >UniRef50_Q478E7 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q478E7_DECAR Length = 277 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 5/131 (3%) Query: 216 AGAGWQWVNLAW-LAGGVWLLWQKA----IRWHIPLSFLVTLALCAMLGWLFSPETLAAP 270 G + +A L G L+ Q+A W FL LA Sbjct: 121 PGQWGSDLGIAVWLIGLGALVAQRACRDDASWLFLAIFLGLLAARLFQLGYSFERAWEIF 180 Query: 271 QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLL 330 L+GA +L AFF+++DP+T R + L ++ + + P+G +A+L Sbjct: 181 CHQALNGALLLFAFFMISDPMTLPDRPVARRLHVGLVAVVAFAWQFLFYRPNGALWALLC 240 Query: 331 ANITVPLIDYY 341 VP+ D Sbjct: 241 LAPLVPIWDSI 251 >UniRef50_Q988S3 Mll6619 protein n=1 Tax=Mesorhizobium loti RepID=Q988S3_RHILO Length = 503 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 3/104 (2%) Query: 233 WLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGA-TMLGAFFILTDPV 291 L+ +K R ++ +F+ + A + P L + + AF +LT+P+ Sbjct: 160 MLIVRKLRRLYLVSTFV--VVALATILATTDPSQYWTALAETLGSSPLLFFAFVMLTEPL 217 Query: 292 TASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITV 335 TA T R+ F A+ G L G + A+L N+ Sbjct: 218 TAPTMRWPRIAFAAIVGFLFAPNIHIGSFYFTPELALLAGNLFA 261 >UniRef50_Q84HM4 UnbU n=2 Tax=Actinomycetales RepID=Q84HM4_NOCAE Length = 336 Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 3/119 (2%) Query: 211 YSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAP 270 ++ +G + + LA G L + + + L ++ L A+L F+ ++ + Sbjct: 168 FTEWTSGVVDALIPVLLLAAGTMLNAKLTKKIPLILGWVGGFVLQAVLRSAFTDLSIVSA 227 Query: 271 QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGAL-AGLLVWLIRSFGGYPDGVAFAV 328 + + A +L +++TDP T+ + R +++FG A L++ + G+ FA+ Sbjct: 228 VLPITGTAFILFTNYMITDPSTSPSKPRNQVLFGLATAAAYAVLVQLHVVF--GLFFAL 284 >UniRef50_B5SP93 Putative UnbU protein n=1 Tax=Actinomyces sp. Lu 9419 RepID=B5SP93_9ACTO Length = 353 Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 3/117 (2%) Query: 217 GAGWQWVNLAWLAG-GVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLL 275 G A+LA G+++ + + + +++ A A + L S ET + L Sbjct: 193 GTFGDIALPAFLACLGLFINFIFTGKLPLIFAWVGGFAAQAAIRALLSDETSFLAALSPL 252 Query: 276 SG-ATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLA 331 SG A +L +++TDP T +G++ FG + ++ +F G FA+ + Sbjct: 253 SGMAVLLFTLYMITDPGTTPRETKGQIAFGLSVAAVYGVLMTFHV-TFGFFFALTIV 308 >UniRef50_B5GNM9 Integral membrane protein n=12 Tax=Streptomyces RepID=B5GNM9_STRCL Length = 631 Score = 43.3 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 69/269 (25%), Gaps = 29/269 (10%) Query: 54 ALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFA----VIIA 109 ++++ L+ + + SA LT L+L P L VFA + Sbjct: 125 SVVSPYLMSVIGVRPTMMVAGTVSAALTALILVRLRAVRNPL-ACALAGVFAFLCNALSG 183 Query: 110 KQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTAS 169 + +G LG +G V + +P + + +G Sbjct: 184 RVTFG-LGMMF----AVGAVAAVFCWPHRWRYHRWAKGAVAAPLAALATASSPVAGLFLG 238 Query: 170 GGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLA 229 G + + V +SG + Sbjct: 239 VVAAALFLNGRRP-------GAYAIGLPPVAVVGLSAWLFPFSGTQPMSIASSSLPFVYG 291 Query: 230 GGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSP--ETLAAPQIHLLSGATMLGAFFIL 287 V LL K W AL L W + + L +G +L Sbjct: 292 VLVCLLVPK--EWRTVKVASGVYALGVFLAWAIDSQIGSNISRLPMLFAGVALLAVL--- 346 Query: 288 TDPVTASTTNRGRLIFGALAGLLVWLIRS 316 P T + + + + ++ + Sbjct: 347 --PYTVPRSRK---WYALVLAVVGMNVWV 370 >UniRef50_C1A9E7 Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9E7_GEMAT Length = 283 Score = 42.6 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 70/194 (36%), Gaps = 8/194 (4%) Query: 24 VLLAA-VPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTG 82 VLL VP + W W +L L A V+A L + + LR + + ++ D A+LTG Sbjct: 26 VLLVLSVPAVLHAGWALVWPSL---LAAIVTAALCD--LPLLRWRDDSWSVPDG-AMLTG 79 Query: 83 LLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSW 142 L+A+ + P PW++ + I AK N NPA G V F + W Sbjct: 80 WLVALVLSPHQPWYVAAAASAIG-IGAKHALRVKRANVLNPAAAGVVATYFLFGSGQSWW 138 Query: 143 LPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSV 202 E+ + V + + I+ V A + Sbjct: 139 GALPEMPTPWIALLLITGVFMTWRLHKAPLALSFLGVYYLIATGLAFVGEPARVVALYRA 198 Query: 203 EQIMQYPIYSGILA 216 + ++G +A Sbjct: 199 PDVHMALFFAGFMA 212 >UniRef50_D0L5Q6 Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L5Q6_GORB4 Length = 405 Score = 42.2 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 228 LAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFIL 287 + G V ++ + + +++ V ++GWL E ++ + S A +L Sbjct: 49 VIGAVLVIVIR--DATVVIAYFVG--ALGVIGWLQLTEGNQDLELWVTSSPMFFVAAIML 104 Query: 288 TDPVTASTTNRGRLIFGALAGLLVWL 313 +P+T+ T R+++G L G L + Sbjct: 105 PEPLTSPATRIPRILYGVLVGALTYC 130 >UniRef50_Q84HJ4 UnbU n=26 Tax=Actinomycetales RepID=Q84HJ4_STRMA Length = 433 Score = 41.0 bits (95), Expect = 0.069, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 1/117 (0%) Query: 211 YSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAP 270 Y G G + + G L + R + + +LV AL A++ ++ A Sbjct: 186 YLTGTTGPGDWILPAVIITLGTMLNAKLTNRMPLIMGWLVGFALQAIIRGWMFDTSIPAA 245 Query: 271 QIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFA 327 + A +L +++TDP T+ + ++ FGA + L+ + G+ FA Sbjct: 246 LGMMTGTAFVLFTNYMVTDPGTSPSKKSSQIAFGAGVAAVYGLLMAVNI-TYGIFFA 301 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.318 0.152 0.455 Lambda K H 0.267 0.0465 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,400,934,809 Number of Sequences: 3077464 Number of extensions: 118129545 Number of successful extensions: 610121 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 407 Number of HSP's successfully gapped in prelim test: 819 Number of HSP's that attempted gapping in prelim test: 607505 Number of HSP's gapped (non-prelim): 2011 length of query: 352 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 222 effective length of database: 640,326,036 effective search space: 142152379992 effective search space used: 142152379992 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 94 (40.6 bits)