220 c3qh4A_ Probab=99.49   E-value=2e-11  Score=89.36  Aligned_columns=241  Identities=15%

Q ss_pred             CCEEEEECCCCEEEEEEECCCCCC-EEEEEECCCC---CCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             616999149958999980788877-1699987573---6989899999999866-9699941488578867887777543
Q batch____        31 DEAEFTGVDDIPVRFVRFRAQHHD-RVVVICPGRI---ESYVKYAELAYDLFHL-GFDVLIIDHRGQGRSGRLLADPHLG  105 (340)
Q Consensus        31 ~~~~~~~~dg~~l~~~~~~~~~~~-p~vv~~HG~~---~s~~~~~~~~~~L~~~-Gy~V~~~D~rG~G~S~~~~~~~~~~  105 (340)
                      +..++.+.||.+|....+.+++++ |+||++||++   ++...+..++..|+.. ||.|+.+|+|+...-...       
T Consensus        58 ~~~~~~~~~g~~i~~~v~~P~~~~~Pvii~~HGGg~~~~~~~~~~~~~~~~~~~~G~~V~~~~Yrl~p~~~~~-------  130 (314)
T c3qh4A_          58 ADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYP-------  130 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTT-------
T ss_pred             EEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCH-------
T ss_conf             6899857999779999984788987199997276641576431158999999867979999638743222212-------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHH-----CCCCCEEEEECCCHHHHHHHHHH----CCHHHCCEEEEECCCCCCCCCHHHHH
Q ss_conf             4353134688899999999985-----38983999921415899999986----09434179999777568763012468
Q batch____       106 HVNRFNDYVDDLAAFWQQEVQP-----GPWRKRYILAHSMGGAISTLFLQ----RHPGVCDAIALTAPMFGIVIRMPSFM  176 (340)
Q Consensus       106 ~~~~~~~~~~Dl~~~i~~~~~~-----~~~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lvl~~p~~~~~~~~~~~~  176 (340)
                            ..++|.......+...     .........|.+.|+..+.....    .....+.+.++..+............
T Consensus       131 ------~~~~d~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (314)
T c3qh4A_         131 ------AALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSE  204 (314)
T ss_dssp             ------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf             ------23899999887532233310222232112332111102678888752037644320342034446565554322


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCHHHHHHHH
Q ss_conf             89988865320001234431000111111002224578877799999851020110134204565776520033488776
Q batch____       177 ARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAG  256 (340)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (340)
                      ....................................                                           .
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~  241 (314)
T c3qh4A_         205 FRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQ-------------------------------------------L  241 (314)
T ss_dssp             TTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSC-------------------------------------------C
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH-------------------------------------------C
T ss_conf             456755676888875422467755461007620111-------------------------------------------0


Q ss_pred             HCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             318972999967997237899999999998520238984899966996301--0488379999999999999974488
Q batch____       257 DDATPTLLLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVIKGAYHEI--LFEKDAMRSVALHAIVDFFNRHNSP  332 (340)
Q Consensus       257 ~i~~P~Lii~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~--~~e~~~~~~~~~~~i~~Fl~~~~~~  332 (340)
                      ....|+++++|+.|.+++  ...+++++++..+.   .+++++++|.+|..  +...-+..+++++.+.+||++-..|
T Consensus       242 ~~~pp~li~~g~~D~~~~--~~~~~~~~L~~~G~---~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~~~lr~~~~~  314 (314)
T c3qh4A_         242 AGLPATLITCGEIDPFRD--EVLDYAQRLLGAGV---STELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFYP  314 (314)
T ss_dssp             TTCCCEEEEEEEESTTHH--HHHHHHHHHHHTTC---CEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCEEEEEECCCCCCHH--HHHHHHHHHHHCCC---CEEEEEECCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             588639998479972016--89999999997799---68999988885203330788689999999999999885186