244 c2vsqA_ Probab=98.96   E-value=1.4e-08  Score=71.79  Aligned_columns=202  Identities=11%

Q ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             88877169998757369898999999998669699941488578867887777543435313468889999999998538
Q batch____        50 AQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADPHLGHVNRFNDYVDDLAAFWQQEVQPGP  129 (340)
Q Consensus        50 ~~~~~p~vv~~HG~~~s~~~~~~~~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~Dl~~~i~~~~~~~~  129 (340)
                      .+.++++++++|+.+|+...|..+++.|     .|+++-.+|...-+                  +-....++.+....+
T Consensus      1054 ~~~~~~pl~~~h~~~g~~~~y~~L~~~l-----~~y~l~~~~~~~~e------------------~~a~~y~~~i~~~~p 1110 (1274)
T c2vsqA_        1054 NQDQEQIIFAFPPVLGYGLMYQNLSSRL-----PSYKLCAFDFIEEE------------------DRLDRYADLIQKLQP 1110 (1274)
T ss_dssp             CTTSCCEEECCCCTTCBGGGGHHHHTTC-----CSCEEEECBCCCST------------------THHHHHHHHHHHHCC
T ss_pred             CCCCCCCEEEECCCCCHHHHHHHHHHHC-----CEEEEECCCCCCHH------------------HHHHHHHHHHHHHCC
T ss_conf             6888774899888220247888578757-----90367138888978------------------999999999999788


Q ss_pred             CCCEEEEECCCHHHHHHHHH---HCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             98399992141589999998---609434179999777568763012468899888653200012344310001111110
Q batch____       130 WRKRYILAHSMGGAISTLFL---QRHPGVCDAIALTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPF  206 (340)
Q Consensus       130 ~~~~~lvGhS~Gg~ia~~~a---~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (340)
                      ..|++|+|||+||.+|..+|   ......|..++++++...............+..............            
T Consensus      1111 ~gp~~l~G~S~Gg~iA~e~A~~L~~~G~~v~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 1178 (1274)
T c2vsqA_        1111 EGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSTVESDVEALMNVNREAVKHGLKQ------------ 1178 (1274)
T ss_dssp             SSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCCCHHHHHHHHHTTCCCTTTGGGHH------------
T ss_pred             CCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHH------------
T ss_conf             99889992462889999999999988898779999808898867656354688751468999999999------------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf             02224578877799999851020110134204565776520033488776318972999967997237899999999998
Q batch____       207 AINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNRMHDRFCELRT  286 (340)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~g~~D~~v~~~~~~~~~~~~~  286 (340)
                                                             ............+..|++++.++.+...+        ....
T Consensus      1179 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 1211 (1274)
T c2vsqA_        1179 ---------------------------------------KTHAFYSYYVNQVKADIDLLTSGADFDIP--------EWLA 1211 (1274)
T ss_dssp             ---------------------------------------HHHHHHHHHHCCBSSEEEEEECSSCCCCC--------SSEE
T ss_pred             ---------------------------------------HHHHHHCCCCCCCCCCEEEEEECCCCCCC--------CCHH
T ss_conf             ---------------------------------------99998604876415546999846876555--------5211


Q ss_pred             HHHCCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             5202389-848999669963010488379999999999999974488310
Q batch____       287 AAGHPVE-GGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSGN  335 (340)
Q Consensus       287 ~~~~~~~-~~~~~~i~~agH~~~~e~~~~~~~~~~~i~~Fl~~~~~~~~~  335 (340)
                      .+..... +.+++.+|| .|.-|+ .++..+.+.+.|.++|+...-...+
T Consensus      1212 ~W~~~~~~~~~~~~~~g-~H~~ml-~~~~v~~~a~~i~~~l~~~~~~~~~ 1259 (1274)
T c2vsqA_        1212 SWEEATTGVYRMKRGFG-THAEML-QGETLDRNAEILLEFLNTQTVTVSK 1259 (1274)
T ss_dssp             CSSTTBSSCCCEEECSS-CTTGGG-SHHHHHHHHHHHHHHHHCCCCCCCH
T ss_pred             HHHHHCCCCEEEEECCC-CHHHHC-CCCHHHHHHHHHHHHHCCCCHHHHC
T ss_conf             03643279818998279-867872-8701899999999984102124430