65 d1rifa_ Probab=99.13   E-value=1.4e-09  Score=85.31  Aligned_columns=122  Identities=26%

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH----HCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             8179899999999999997099099986988527899999999----619929998186899999999999999986299
Q batch____        18 FKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPAL----RAKKKVIISTGSKALQDQLYSRDLPTVSKALKY   93 (636)
Q Consensus        18 ~~~R~~Q~~~~~~i~~al~~~~~~liEaPTGtGKTla~L~~al----~~~kkvii~t~T~~lq~Q~~~~~~~~l~~~l~~   93 (636)
                      .+||++|.+.+..+.+    ++++++-+|||+|||+.++..+.    ..+.+++|.+++.++..|..++    +.+..+.
T Consensus       112 ~~lr~yQ~~~i~~~l~----~~~~ii~~~tGsGKT~~~~~~i~~~~~~~~~~~lii~p~~~L~~q~~~~----~~~~~~~  183 (282)
T d1rifa_         112 IEPHWYQKDAVFEGLV----NRRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADD----FVDYRLF  183 (282)
T ss_dssp             CCCCHHHHHHHHHHHH----HSEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECSSHHHHHHHHHH----HHHHTSC
T ss_pred             CCCCHHHHHHHHHHHH----CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH----HHHHCCC
T ss_conf             4778889999999984----7985999368881379999999999742798099995528999999999----9986075


Q ss_pred             CCEEEEEECHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHCC
Q ss_conf             97099982357631707998753035777368899998767640458878778743023411333230024535665408
Q batch____        94 TGNVALLKGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDC  173 (636)
Q Consensus        94 ~~~~~~l~gr~~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  173 (636)
                      ....+...+.......                                                                
T Consensus       184 ~~~~~~~~~~~~~~~~----------------------------------------------------------------  199 (282)
T d1rifa_         184 SHAMIKKIGGGASKDD----------------------------------------------------------------  199 (282)
T ss_dssp             CGGGEEECSTTCSSTT----------------------------------------------------------------
T ss_pred             CCCCEEECCCCCCCHH----------------------------------------------------------------
T ss_conf             7742000016753000----------------------------------------------------------------


Q ss_pred             CCCCCCHHHHHHHHCCCCCEEEEEHHHHHCHHHHHHCCCCCCCCCCCEEEECCCCHH
Q ss_conf             654759679999840349999970888613588752123323753204640232227
Q batch____       174 PMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQL  230 (636)
Q Consensus       174 ~~~~~CpY~~~r~~~~~adivi~~y~yll~~~~~~~~~~~~~~~~~~ilIiDEAHnl  230 (636)
                                  ......+|+|++|+.+-..       ......+..+||+||||++
T Consensus       200 ------------~~~~~~~iii~t~~~l~~~-------~~~~~~~~~~vIiDEaH~~  237 (282)
T d1rifa_         200 ------------KYKNDAPVVVGTWQTVVKQ-------PKEWFSQFGMMMNDECHLA  237 (282)
T ss_dssp             ------------CCCTTCSEEEECHHHHTTS-------CGGGGGGEEEEEEETGGGC
T ss_pred             ------------CCCCCCCEEEECHHHHHHH-------HHHHHHCCCEEEEECCCCC
T ss_conf             ------------1134357889739999887-------8842312528998380027