63 c3ly5A_ Probab=99.16   E-value=2.4e-09  Score=83.75  Aligned_columns=136  Identities=29%

Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHC----------CCCEEEECCCHHHHHHHHHH
Q ss_conf             61899817989999999999999709909998698852789999999961----------99299981868999999999
Q batch____        13 KAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRA----------KKKVIISTGSKALQDQLYSR   82 (636)
Q Consensus        13 ~~fp~~~~R~~Q~~~~~~i~~al~~~~~~liEaPTGtGKTla~L~~al~~----------~kkvii~t~T~~lq~Q~~~~   82 (636)
                      ..+-..+|+|.|.+.+..+.+    |+++++.||||+|||++|++|++..          ..+++|.++|..+..|+. +
T Consensus        20 ~~~g~~~~~~~Q~~ai~~ll~----g~~viv~a~tgsGKT~~~~l~~l~~l~~~~~~~~~~~~~iii~P~~~L~~q~~-~   94 (211)
T c3ly5A_          20 KEMGFTNMTEIQHKSIRPLLE----GRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTF-G   94 (211)
T ss_dssp             HHTTCCBCCHHHHHHHHHHHH----TCCCEECCCTTSCHHHHHHHHHHHHHHHTTCCGGGCCCEEEECSSHHHHHHHH-H
T ss_pred             HHCCCCCCCHHHHHHHHHHHC----CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH-H
T ss_conf             977899889899999999967----99799997799722589999999999730000135874279715303289999-9


Q ss_pred             HHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHC
Q ss_conf             99999986299970999823576317079987530357773688999987676404588787787430234113332300
Q batch____        83 DLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVT  162 (636)
Q Consensus        83 ~~~~l~~~l~~~~~~~~l~gr~~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~~~~~~~~~~~~~~i~  162 (636)
                      .+..+....+..+....-..                                                            
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------------------  114 (211)
T c3ly5A_          95 VLKELMTHHVHTYGLIMGGS------------------------------------------------------------  114 (211)
T ss_dssp             HHHHHTTTCCSCEEEECSSS------------------------------------------------------------
T ss_pred             HHHHHHHHCCCEEEEEEECC------------------------------------------------------------
T ss_conf             99998645396068887337------------------------------------------------------------


Q ss_pred             CCCHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHCHHHHHHCCCCCCCCCCCEEEECCCCHHHH
Q ss_conf             2453566540865475967999984034999997088861358875212332375320464023222789
Q batch____       163 STNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPD  232 (636)
Q Consensus       163 ~~~~~~~~~~~~~~~~CpY~~~r~~~~~adivi~~y~yll~~~~~~~~~~~~~~~~~~ilIiDEAHnl~~  232 (636)
                                      ..-..........++++++...+.............   .-..+|+||||.+.+
T Consensus       115 ----------------~~~~~~~~~~~~~~i~i~tp~~l~~~l~~~~~~~~~---~l~~iViDE~~~l~~  165 (211)
T c3ly5A_         115 ----------------NRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYK---NLQCLVIDEADRILD  165 (211)
T ss_dssp             ----------------CHHHHHHHHHHCCSEEEECHHHHHHHHHHCTTCCCT---TCCEEEECSHHHHHH
T ss_pred             ----------------CHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCC---CCCEEEEEEHHHHCC
T ss_conf             ----------------715888840278827984668999999612532005---421899730588324