Phyre 2 alignment of P76257 with c3pxiB_

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Job Description | P76257
Confidence | 92.48% | Date | Thu Jan 5 12:21:18 GMT 2012
Rank | 221 | Aligned Residues | 37
% Identity | 38% | Template | c3pxiB_
PDB info | PDB header:protein binding | Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; | PDBTitle: structure of meca108:clpc
Resolution | 6.93 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | Q | R | Q | M | A | V | A | V | T | Q | A | I | E | K | G | Q | . | . | . | . | . | . | . | . | . | . | . | P | L | V | V | E | A | G | T | G | T | G | K | T | Y | A | Y | L | A | P | A | L | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Sequence |  | G | Q | D | E | A | V | V | A | V | A | K | A | V | R | R | A | R | A | G | L | K | D | P | K | R | P | I | G | S | F | I | F | L | G | P | T | G | V | G | K | T | . | . | E | L | A | R | A | L | A
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  | S |  | T | T | S |  | S |  |  |  |  |  |  | S |  | T | T | S | S |  |  | . | . |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 512 | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . |  |  | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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