Phyre 2 alignment of P76257 with c2qbyA_

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Job Description | P76257
Confidence | 84.76% | Date | Thu Jan 5 12:21:18 GMT 2012
Rank | 300 | Aligned Residues | 44
% Identity | 20% | Template | c2qbyA_
PDB info | PDB header:replication/dna | Chain: A: PDB Molecule:cell division control protein 6 homolog 1; | PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
Resolution | 3.35 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | D | D | F | A | P | D | G | Q | L | A | K | A | I | P | G | F | K | P | R | E | P | Q | R | Q | M | A | V | A | V | T | Q | A | I | E | K | G | . | . | . | . | . | . | Q | P | L | V | V | E | A | G | T | G | T | G | K | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | E | Y | L | L | P | D | Y | I | . | . | . | . | . | . | . | P | D | E | L | P | H | R | E | D | Q | I | R | K | I | A | S | I | L | A | P | L | Y | R | E | E | K | P | N | N | I | F | I | Y | G | L | T | G | T | G | K | T
Template Known Secondary structure |  | G | G | G | G | S | S | S |  |  | . | . | . | . | . | . | . |  | S |  |  | T | T |  |  |  |  |  |  |  |  |  |  | S | S | G | G | G | G | G | T |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 21 | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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