Phyre 2 alignment of P76257 with c3dzdA_

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Job Description | P76257
Confidence | 89.44% | Date | Thu Jan 5 12:21:18 GMT 2012
Rank | 255 | Aligned Residues | 34
% Identity | 15% | Template | c3dzdA_
PDB info | PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional regulator (ntrc family); | PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | E | P | Q | R | Q | M | A | V | A | V | T | Q | A | I | E | K | G | Q | P | L | V | V | E | A | G | T | G | T | G | K | T | Y | A | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | K | I | L | E | I | K | R | L | I | P | K | I | A | K | S | K | A | P | V | L | I | T | G | E | S | G | T | G | K | E | I | V | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  | S |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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