Phyre 2 alignment of P76257 with c4a2iV_

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Job Description | P76257
Confidence | 71.47% | Date | Thu Jan 5 12:21:18 GMT 2012
Rank | 436 | Aligned Residues | 42
% Identity | 19% | Template | c4a2iV_
PDB info | PDB header:ribosome/hydrolase | Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; | PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
Resolution | 16.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | V | A | V | T | Q | A | I | E | K | G | Q | P | L | V | V | E | A | G | T | G | T | G | K | T | Y | A | Y | L | A | P | A | L | R | A | K | K | K | V | I | I | S | T | G | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | K | P | L | E | E | A | L | T | G | R | I | S | I | F | A | . | G | Q | S | G | V | G | K | S | . | . | S | L | L | N | A | L | L | G | L | Q | N | E | I | L | T | N | T | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  | . |  |  | T | T | S | S |  |  | . | . |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |  | . | . | . | . | . | . | . | . |  |  | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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