50 c1vliA_ Probab=97.91   E-value=0.00012  Score=48.25  Aligned_columns=118  Identities=10%

Q ss_pred             HHHHHHCCCCEEEEEEEEC----CCCCHHHHHH----------HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf             8999834966899998518----9989899999----------9999999999749947999950588776543457999
Q batch____       112 PLQIKQDGGKALKLLVLWR----SDEDAQQRLD----------MVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAI  177 (292)
Q Consensus       112 ve~a~rlGadAVk~lv~~~----~d~~~~~~~~----------~~~~v~e~c~~~g~pll~e~~~~~~~~~~~~~~p~~v  177 (292)
                      ++.|.+.||||||++.|-.    ++...+.+.+          +..++.+.|++.||.|+..|+        .....+.+
T Consensus        37 I~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~sTpf--------d~~svd~l  108 (358)
T c1vliA_          37 IDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREKQVIFLSTVC--------DEGSADLL  108 (358)
T ss_dssp             HHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCC--------SHHHHHHH
T ss_pred             HHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEC--------CHHHHHHH
T ss_conf             9999971997898420142100156556304577753169989999999999975982998347--------99999999


Q ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             99999996339969995066775542024689987755425981999879999899999999999729948998
Q batch____       178 IDAAKELGDSGADLYKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGASGFLA  251 (292)
Q Consensus       178 ~~aar~~~elGaDi~K~~~pg~~~~~~~~~~~~~~~~~~~~~vP~vvlggg~~~e~f~~~v~~A~~aGa~Gv~~  251 (292)
                      .       ++|++++|+       ++.+.+---+=+-++..+.|+++=.|..+.+++...++....+|..-++.
T Consensus       109 ~-------~~~v~~~KI-------aS~el~n~pLL~~~A~~gkPvilSTGmatl~Ei~~Av~~i~~~g~~~i~l  168 (358)
T c1vliA_         109 Q-------STSPSAFKI-------ASYEINHLPLLKYVARLNRPXIFSTAGAEISDVHEAWRTIRAEGNNQIAI  168 (358)
T ss_dssp             H-------TTCCSCEEE-------CGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred             H-------HCCCCEEEE-------CHHHCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             8-------639986998-------41227988999999631897185135468899999999999679984899