42 c3sm3A_ Probab=99.87   E-value=4.7e-21  Score=143.35  Aligned_columns=186  Identities=19%

Q ss_pred             HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCCCCC
Q ss_conf             9999851448987599988999489999973197699931653578888986431001-----12222222223331100
Q batch____        46 GYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGI-----QVDYVQETVEEHAAKHA  120 (240)
Q Consensus        46 ~~i~~~~~~~~g~~vLDiGCG~G~~~~~la~~~~~v~g~d~s~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  120 (240)
                      ++|.+.++  ++.+|||||||+|.++..+++.+.+++|+|+|+.|++.+++.......     .................
T Consensus         5 ~~i~~~l~--~~~~VLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (212)
T c3sm3A_           5 PIIHNYLQ--EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHD   82 (212)
T ss_dssp             TTHHHHCC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCT
T ss_pred             HHHHHHCC--CCCEEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             88999589--9978999877982899999970994999975946757888753331001112222222222222211335


Q ss_pred             CCHHHHHHHHHHCCC---CHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC----------
Q ss_conf             100135665431000---0135899999997299718999707987188999877666653027753344----------
Q batch____       121 GQYDVVTCMEMLEHV---PDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHD----------  187 (240)
Q Consensus       121 ~~~d~i~~~~~~~~~---~d~~~~l~~i~~~LkpgG~~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~----------  187 (240)
                      ..++.+++...++|.   .+...++++++++|||||++++++++..........................          
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lkpgG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (212)
T c3sm3A_          83 SSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETE  162 (212)
T ss_dssp             TCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEE
T ss_pred             CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC
T ss_conf             65302454404200010245666789998408897289999669875203667653200011011330231033234431


Q ss_pred             -CCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEECCCCCCCCEEEEEEE
Q ss_conf             -3346799999999998399079988654165568246228876028899985
Q batch____       188 -VKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQN  239 (240)
Q Consensus       188 -~~~~~~~~~l~~~l~~aGf~~~~~~~~~y~~~~~~w~~~~~~~~~y~~~a~K  239 (240)
                       ..++++.+++..+++++||++++.....+......=...      +.+.|||
T Consensus       163 ~~~~~~t~~~l~~~l~~~GF~~~~~~~~~~~~~~~~~~~~------~~~iark  209 (212)
T c3sm3A_         163 FIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILG------FVIIAQK  209 (212)
T ss_dssp             EEEECBCHHHHHHHHHTTTEEEEEEEEEEEECTTSCEEEE------EEEEEEE
T ss_pred             CEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEE------EEEEEEE
T ss_conf             0110579999999999779809999874125689982106------9999985