BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (149 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P0ABL3 Diheme cytochrome c napB n=142 Tax=Enterobacteri...   317   1e-85
UniRef50_D0IAV4 Nitrate reductase cytochrome c550-type subunit n...   158   4e-38
UniRef50_P44654 Diheme cytochrome c napB n=21 Tax=Pasteurellacea...   149   2e-35
UniRef50_C4K978 Resolvase domain protein n=2 Tax=Rhodocyclaceae ...   121   6e-27
UniRef50_A0KIM4 PeriplasmiC nitrate reductase, diheme cytochrome...   117   9e-26
UniRef50_Q47A88 Periplasmic nitrate reductase subunit NapB n=1 T...   117   1e-25
UniRef50_B5ZZF7 Nitrate reductase cytochrome c-type subunit (Nap...   114   9e-25
UniRef50_A0L804 Periplasmic nitrate reductase subunit NapB n=1 T...   112   3e-24
UniRef50_A6VQY4 Nitrate reductase cytochrome c-type subunit (Nap...   112   4e-24
UniRef50_P39186 Diheme cytochrome c napB n=5 Tax=Burkholderiales...   111   7e-24
UniRef50_A0EJJ6 Nitrate reductase n=1 Tax=uncultured bacterium p...   110   1e-23
UniRef50_Q56351 Diheme cytochrome c napB n=2 Tax=Paracoccus RepI...   109   2e-23
UniRef50_B3R8B3 Nitrate reductase (NAP)small subunit, Diheme cyt...   109   3e-23
UniRef50_Q487G5 Periplasmic nitrate reductase, cytochrome c-type...   109   3e-23
UniRef50_Q53177 Diheme cytochrome c napB n=5 Tax=Alphaproteobact...   108   6e-23
UniRef50_Q8VU46 Periplasmic nitrate reductase small diheme cytoc...   108   6e-23
UniRef50_B1Y6A3 Nitrate reductase cytochrome c-type subunit (Nap...   107   1e-22
UniRef50_A1K382 Probable diheme cytochrome C n=1 Tax=Azoarcus sp...   107   1e-22
UniRef50_A5EZY0 Periplasmic nitrate reductase, cytochrome c-type...   107   2e-22
UniRef50_A1S624 Periplasmic nitrate reductase subunit NapB n=8 T...   103   1e-21
UniRef50_Q02IZ3 Cytochrome c-type protein NapB n=10 Tax=Pseudomo...   103   1e-21
UniRef50_A9I7N5 Periplasmic nitrate reductase, cytochrome c-type...   102   5e-21
UniRef50_B6B7Q2 Periplasmic nitrate reductase, diheme cytochrome...   101   7e-21
UniRef50_D0U4E1 Periplasmic nitrate reductase subunit NapB n=1 T...   101   9e-21
UniRef50_Q21PN0 Periplasmic nitrate reductase subunit NapB n=1 T...   100   1e-20
UniRef50_D0J756 Nitrate reductase cytochrome c-type subunit n=1 ...   100   2e-20
UniRef50_A3D3V4 Periplasmic nitrate reductase subunit NapB n=18 ...   100   2e-20
UniRef50_C1D9G6 Nitrate reductase n=1 Tax=Laribacter hongkongens...   100   2e-20
UniRef50_Q13I14 Periplasmic nitrate reductase subunit NapB n=2 T...    99   4e-20
UniRef50_B6IR11 Diheme cytochrome c napB n=1 Tax=Rhodospirillum ...    99   5e-20
UniRef50_C7RM81 Nitrate reductase cytochrome c-type subunit (Nap...    98   1e-19
UniRef50_A4WXI9 Periplasmic nitrate reductase subunit NapB n=3 T...    96   5e-19
UniRef50_B6R9T8 Periplasmic nitrate reductase, diheme cytochrome...    92   6e-18
UniRef50_A6Q601 Periplasmic nitrate reductase, small subunit n=1...    85   7e-16
UniRef50_B9L8L1 Periplasmic nitrate reductase, diahem cytochrome...    84   1e-15
UniRef50_Q2W3T4 Nitrate reductase cytochrome c-type subunit n=5 ...    84   1e-15
UniRef50_A7BM57 Periplasmic nitrate reductase beta subunit n=1 T...    83   2e-15
UniRef50_A7BUA2 Periplasmic nitrate reductase small subunit n=1 ...    77   2e-13
UniRef50_B2V811 Nitrate reductase cytochrome c-type subunit (Nap...    74   2e-12
UniRef50_Q4HRN5 NapB periplasmic nitrate reductase n=2 Tax=Campy...    71   1e-11
UniRef50_B9KCP9 Periplasmic nitrate reductase, small subunit, cy...    70   2e-11
UniRef50_A1RG48 Periplasmic nitrate reductase subunit NapB n=20 ...    69   4e-11
UniRef50_A8UYP3 Periplasmic nitrate reductase small subunit (Cyt...    69   4e-11
UniRef50_B9D0H5 PeriplasmiC nitrate reductase, diheme cytochrome...    69   7e-11
UniRef50_D1B0Z1 Nitrate reductase cytochrome c-type subunit (Nap...    68   8e-11
UniRef50_A0RQ33 PeriplasmiC nitrate reductase, diheme cytochrome...    65   7e-10
UniRef50_A6Q703 Periplasmic nitrate reductase, small subunit n=2...    63   2e-09
UniRef50_A7GZP2 Periplasmic nitrate reductase, diheme cytochrome...    61   9e-09
UniRef50_A8ERQ6 Periplasmic nitrate reductase, small subunit, cy...    58   1e-07
UniRef50_C5EY43 NapB periplasmic nitrate reductase n=2 Tax=Helic...    57   3e-07
UniRef50_Q30QD7 Periplasmic nitrate reductase subunit NapB n=2 T...    49   5e-05
UniRef50_A4N8U4 Diheme cytochrome C NapB n=3 Tax=Haemophilus inf...    47   3e-04

>UniRef50_P0ABL3 Diheme cytochrome c napB n=142 Tax=Enterobacteriaceae
           RepID=NAPB_ECOLI
          Length = 149

 Score =  317 bits (811), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
           MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY
Sbjct: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
           VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR
Sbjct: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120

Query: 121 YFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           YFCLQCHVPQADTAPIVGNTFTPSKGYGK
Sbjct: 121 YFCLQCHVPQADTAPIVGNTFTPSKGYGK 149


>UniRef50_D0IAV4 Nitrate reductase cytochrome c550-type subunit n=1 Tax=Grimontia
           hollisae CIP 101886 RepID=D0IAV4_VIBHO
          Length = 150

 Score =  158 bits (400), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 76/144 (52%), Positives = 97/144 (67%), Gaps = 7/144 (4%)

Query: 13  WTAMLALVVSGAVWAA----NGV-DFSQSPEVSGTQ--EGAIRMPKEQDRMPLNYVNQPP 65
           ++ +LA+++  A  AA     G+     + E+  T    G   +PK QDR  LNYVNQPP
Sbjct: 7   FSLVLAVLLGSATVAAVEEGTGIKSLRGATEIGETNVAPGIKSVPKNQDRFSLNYVNQPP 66

Query: 66  MIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQ 125
           MIPH+++GYQV  + N CLQCH V+ YR TGAPR+SPTHFMD D KV  E++PRRYFCLQ
Sbjct: 67  MIPHAIDGYQVNQSNNACLQCHDVDVYRKTGAPRVSPTHFMDRDNKVLTEISPRRYFCLQ 126

Query: 126 CHVPQADTAPIVGNTFTPSKGYGK 149
           CHVPQA T  +V N F P+  +GK
Sbjct: 127 CHVPQAHTDELVENEFVPAGKFGK 150


>UniRef50_P44654 Diheme cytochrome c napB n=21 Tax=Pasteurellaceae RepID=NAPB_HAEIN
          Length = 150

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 89/137 (64%), Gaps = 2/137 (1%)

Query: 13  WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVE 72
           +TA+ A  +  +   A G D +Q+ E           P++ +   LNYVNQPPM+PHSV 
Sbjct: 16  FTALFAGSLMASDAPAVGKDLTQAAE--NIPPAFHNAPRQGELPALNYVNQPPMVPHSVA 73

Query: 73  GYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
            YQVT N N+CL CH  E+ R +GA RISPTHFMD DGKVG+  +PRRYFCLQCHV QA+
Sbjct: 74  NYQVTKNVNQCLNCHSPENSRLSGATRISPTHFMDRDGKVGSSSSPRRYFCLQCHVSQAN 133

Query: 133 TAPIVGNTFTPSKGYGK 149
             PIV N F P KGYG 
Sbjct: 134 VDPIVPNDFKPMKGYGN 150


>UniRef50_C4K978 Resolvase domain protein n=2 Tax=Rhodocyclaceae RepID=C4K978_THASP
          Length = 150

 Score =  121 bits (304), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 8/149 (5%)

Query: 2   KSHDLKKALCQWTAMLALV----VSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMP 57
           ++ +L  AL       A+V    ++ AV +  G D ++       Q G  +   +Q  + 
Sbjct: 4   QTRNLVLALVAAVGFGAMVPPAAMAQAVKSIRGADVAEQE----LQVGNYKPIPDQAPIE 59

Query: 58  LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVA 117
            +YV QPP+IPH VEGY+VT N N+C+ CH    Y+ +GA ++S THF D DG   + ++
Sbjct: 60  RDYVQQPPLIPHKVEGYEVTINFNKCMDCHAWSRYKESGATKVSLTHFKDRDGGELSNIS 119

Query: 118 PRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           PRRYFC+QCHVPQ D  P+VGN F  ++G
Sbjct: 120 PRRYFCMQCHVPQTDAKPLVGNKFQRAEG 148


>UniRef50_A0KIM4 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=3
           Tax=Gammaproteobacteria RepID=A0KIM4_AERHH
          Length = 151

 Score =  117 bits (294), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 25/147 (17%)

Query: 15  AMLALVVSGAVWAANGVDFSQSPEVSGT------QEGAIRMPKEQDRMPLN--------- 59
           AMLA +++G++ AA        PE++ +      + G   +  + D  P+          
Sbjct: 7   AMLACLMAGSLMAA-------VPEITNSTGGIKSERGNTDLVTDADAAPMKNFRKDGDLY 59

Query: 60  ---YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
              Y++QPP+IPH    Y+V    N+CL CH  ++     AP+ISPTHF   DG    EV
Sbjct: 60  DRQYMHQPPLIPHDTRNYEVDNKVNKCLACHSFKNASAMKAPKISPTHFETRDGMTLGEV 119

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFTP 143
           +PRRYFCLQCHVPQAD  P+V NTF P
Sbjct: 120 SPRRYFCLQCHVPQADAKPLVENTFKP 146


>UniRef50_Q47A88 Periplasmic nitrate reductase subunit NapB n=1 Tax=Dechloromonas
           aromatica RCB RepID=Q47A88_DECAR
          Length = 146

 Score =  117 bits (294), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 70/103 (67%)

Query: 47  IRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFM 106
            R  K+++ +P N+  QPP+IPHS++GY +T N N+C+ CH  E    TGA +++ +H++
Sbjct: 44  FRPEKDKESIPRNFQKQPPLIPHSIKGYNITQNFNKCMDCHSKERAEETGATKVAKSHYL 103

Query: 107 DSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           D + K    ++PRRYFC+QCHVPQ D  P+V NT+ P+   G+
Sbjct: 104 DREDKKLTNISPRRYFCMQCHVPQFDAKPLVENTYKPAAKRGE 146


>UniRef50_B5ZZF7 Nitrate reductase cytochrome c-type subunit (NapB) n=7
           Tax=Rhizobiaceae RepID=B5ZZF7_RHILW
          Length = 167

 Score =  114 bits (285), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 84/139 (60%), Gaps = 9/139 (6%)

Query: 12  QWTAMLA-LVVSGAVWAANGVDFSQSPEVSGTQEG-----AIRMPK---EQDRMPLNYVN 62
           +WTA+ A L+V     +   V     P++ G  E      A  +P+   +  R    Y +
Sbjct: 15  EWTAIAAGLLVFVTTASIAQVVTQNVPQLQGPPEAMQSAPAAVLPRWVVDDRRQMRAYPD 74

Query: 63  QPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYF 122
           QPP+IPHS+EGY+++ N NRCL CH  E  + +GAP IS TH+M  DG++ A+V+PRRYF
Sbjct: 75  QPPIIPHSIEGYELSVNANRCLSCHKREFTQDSGAPMISVTHYMTRDGQMIADVSPRRYF 134

Query: 123 CLQCHVPQADTAPIVGNTF 141
           C  CHVPQAD  P+V + F
Sbjct: 135 CTACHVPQADIKPLVPSMF 153


>UniRef50_A0L804 Periplasmic nitrate reductase subunit NapB n=1 Tax=Magnetococcus
           sp. MC-1 RepID=A0L804_MAGSM
          Length = 152

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 5/136 (3%)

Query: 13  WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAI-----RMPKEQDRMPLNYVNQPPMI 67
           W A  AL+   +  +AN         V G    A      +  ++Q  +  +Y+ QPP+I
Sbjct: 12  WMACFALLGVVSTASANEGGVQSLRGVHGLDSNASEPDFKKWNEDQKPIKRDYLQQPPLI 71

Query: 68  PHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCH 127
           PHSVE Y++    NRCL CH  E+Y+ +GA +IS THF D  G   A+V+P RYFC QCH
Sbjct: 72  PHSVEQYRINLRQNRCLSCHSWETYKQSGATKISLTHFRDRYGSELADVSPGRYFCTQCH 131

Query: 128 VPQADTAPIVGNTFTP 143
           VPQ +  P+V NTF P
Sbjct: 132 VPQRNAQPLVENTFKP 147


>UniRef50_A6VQY4 Nitrate reductase cytochrome c-type subunit (NapB) n=13
           Tax=Pasteurellaceae RepID=A6VQY4_ACTSZ
          Length = 143

 Score =  112 bits (279), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 83/145 (57%), Gaps = 19/145 (13%)

Query: 17  LALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMP-----------KEQDRMPLNYVNQPP 65
           LAL+++    A  G   +++P  + T E   +MP           K+   +P  + +QPP
Sbjct: 6   LALILT----ALAGFAVAETPSSNLTME---QMPENVAPAYTNPQKDVGNIPTTFPHQPP 58

Query: 66  MIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQ 125
           ++PHS+ G QVT N N+CL CH  E   TTGAPR+  +HF+D DGK     +PRRYFCLQ
Sbjct: 59  LVPHSIRGLQVTKNANQCLGCHSPEVSPTTGAPRVPESHFLDRDGKRTEGTSPRRYFCLQ 118

Query: 126 CHVPQADTAPIVGNTF-TPSKGYGK 149
           CHV Q D  PIV N F T  K  GK
Sbjct: 119 CHVQQTDVNPIVQNKFETIRKTQGK 143


>UniRef50_P39186 Diheme cytochrome c napB n=5 Tax=Burkholderiales RepID=NAPB_RALEH
          Length = 169

 Score =  111 bits (278), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 3/135 (2%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSP-EVSGTQEGAIRMPKEQD--RMPLNYVNQPPM 66
           L    AM A+       A   VD  + P  ++      +  P E    R   NY  QPP 
Sbjct: 17  LLAALAMQAIFFPAPARAQGLVDAMRGPTAIANEPRAPLLYPTENKDIRRTRNYTMQPPT 76

Query: 67  IPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQC 126
           IPH ++GYQ+  + NRC+ CH       T A  +S TH+MD D  V A+V+PRRYFC QC
Sbjct: 77  IPHKIDGYQLDKDFNRCMFCHARTRTEETQAIPVSITHYMDRDNNVLADVSPRRYFCTQC 136

Query: 127 HVPQADTAPIVGNTF 141
           HVPQADT P++GN F
Sbjct: 137 HVPQADTKPLIGNNF 151


>UniRef50_A0EJJ6 Nitrate reductase n=1 Tax=uncultured bacterium pES01019D12
           RepID=A0EJJ6_9BACT
          Length = 148

 Score =  110 bits (276), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 2/96 (2%)

Query: 52  EQDRMPL--NYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSD 109
           E D  PL  ++V QPP+IPHS +GYQ+    N+CL CH   +++  GA +IS THF D D
Sbjct: 50  EPDSSPLTRDFVQQPPLIPHSTKGYQINLKFNKCLTCHSWANHKEAGATKISLTHFKDRD 109

Query: 110 GKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSK 145
           G   + V+  RYFC QCHVPQ DTAP+V N F P K
Sbjct: 110 GNELSNVSASRYFCTQCHVPQRDTAPLVENEFEPVK 145


>UniRef50_Q56351 Diheme cytochrome c napB n=2 Tax=Paracoccus RepID=NAPB_PARPN
          Length = 161

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 58/83 (69%)

Query: 59  NYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP 118
           NY  QPP+IPHS++GYQ+T NTNRC+ CH  +    +GAP IS THF D DG+V  +V P
Sbjct: 69  NYPEQPPVIPHSIDGYQLTVNTNRCMDCHKPQFTEGSGAPMISVTHFQDRDGQVLTDVTP 128

Query: 119 RRYFCLQCHVPQADTAPIVGNTF 141
           RRYFC  CHV Q D  P+V N F
Sbjct: 129 RRYFCTACHVQQTDVQPLVPNQF 151


>UniRef50_B3R8B3 Nitrate reductase (NAP)small subunit, Diheme cytochrome c napB n=4
           Tax=Proteobacteria RepID=B3R8B3_CUPTR
          Length = 175

 Score =  109 bits (273), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 58/87 (66%)

Query: 55  RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGA 114
           R   NY  QPP IPH ++GYQ+  + NRC+ CH       T A  +S TH+MD D  V A
Sbjct: 65  RRNRNYTMQPPTIPHKIDGYQLDKDFNRCMFCHARTRTEETQAIPVSITHYMDRDNNVLA 124

Query: 115 EVAPRRYFCLQCHVPQADTAPIVGNTF 141
           EV+PRRYFC QCHVPQAD  P+VGN+F
Sbjct: 125 EVSPRRYFCTQCHVPQADAKPLVGNSF 151


>UniRef50_Q487G5 Periplasmic nitrate reductase, cytochrome c-type subunit n=3
           Tax=Gammaproteobacteria RepID=Q487G5_COLP3
          Length = 167

 Score =  109 bits (272), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 13/145 (8%)

Query: 10  LCQWTAMLALVVSGAVWA--ANGVDFSQSPEVSGTQEGA-IRMPKEQDRMP--------- 57
           L    ++L L VS  +++  AN  D      V+  ++   I + KE + +P         
Sbjct: 6   LAAIASLLVLAVSPIMYSLNANAADKETVNSVATLRDATPIDVQKEPNIIPKVINKDIKQ 65

Query: 58  -LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
             NY  QPP+IPH+   Y+V  N N+C+ CH       + AP +S TH+MD DG   AEV
Sbjct: 66  GRNYPMQPPVIPHTTRSYEVNKNNNKCMSCHSRHRTEKSQAPMVSVTHYMDRDGNFLAEV 125

Query: 117 APRRYFCLQCHVPQADTAPIVGNTF 141
           +PRRYFC QCHV Q D  P+V NTF
Sbjct: 126 SPRRYFCNQCHVTQLDAEPLVENTF 150


>UniRef50_Q53177 Diheme cytochrome c napB n=5 Tax=Alphaproteobacteria
           RepID=NAPB_RHOS4
          Length = 154

 Score =  108 bits (270), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 59/83 (71%)

Query: 59  NYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP 118
           NY  QPP+IPHS+EGYQ++ N NRCL+CH  +      AP IS THF D +G++ A+V+P
Sbjct: 58  NYPEQPPVIPHSIEGYQLSVNANRCLECHRRQYSGLVAAPMISITHFQDREGQMLADVSP 117

Query: 119 RRYFCLQCHVPQADTAPIVGNTF 141
           RRYFC  CHVPQ +  P+V N F
Sbjct: 118 RRYFCTACHVPQTNAQPLVTNEF 140


>UniRef50_Q8VU46 Periplasmic nitrate reductase small diheme cytochrome c subunit n=1
           Tax=Azospirillum brasilense RepID=Q8VU46_AZOBR
          Length = 160

 Score =  108 bits (269), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 78/129 (60%), Gaps = 11/129 (8%)

Query: 21  VSGAVWAANGVDFSQSPEVSG----TQE-GAIRMPKE---QDRMPLNYVNQPPMIPHSVE 72
           VSG V+AA+G   ++ P  SG    TQE  A  M KE     +   NY +QPP+IPH++ 
Sbjct: 20  VSG-VFAADGAAPAKVP--SGPHPITQEIPADPMAKEITDDHKRARNYADQPPLIPHAIR 76

Query: 73  GYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
            YQ+  N N+C+ CH  ++   + AP IS THF D DG+    V+PRRYFC QCHVPQ D
Sbjct: 77  DYQIDLNINKCMTCHDRKNTEGSQAPMISVTHFQDRDGQTLGAVSPRRYFCTQCHVPQTD 136

Query: 133 TAPIVGNTF 141
             PI GN F
Sbjct: 137 AQPITGNRF 145


>UniRef50_B1Y6A3 Nitrate reductase cytochrome c-type subunit (NapB) n=1
           Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A3_LEPCP
          Length = 161

 Score =  107 bits (267), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)

Query: 51  KEQDRMPLN--YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDS 108
           +E+D  P +  +V QPP+IPH+  GYQ+T N N+C+ CH  +  + +GA ++S THF   
Sbjct: 62  QERDHGPADRDFVQQPPLIPHTTAGYQITKNYNKCMDCHAWQKTKVSGATKVSVTHFRTR 121

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           +G+    ++PRRYFC QCHVPQ D  P++ NTF  ++G
Sbjct: 122 EGQELDNISPRRYFCTQCHVPQTDARPLIDNTFQRARG 159


>UniRef50_A1K382 Probable diheme cytochrome C n=1 Tax=Azoarcus sp. BH72
           RepID=A1K382_AZOSB
          Length = 155

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 54/82 (65%)

Query: 60  YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPR 119
           Y  QPP+IPH +EGYQ+  N NRC+ CH       + AP IS +HF D DG   AE++PR
Sbjct: 54  YAMQPPIIPHKIEGYQLDRNVNRCMMCHARTRTEQSQAPMISVSHFTDRDGNFLAELSPR 113

Query: 120 RYFCLQCHVPQADTAPIVGNTF 141
           RYFCLQCHVPQ    PIV N F
Sbjct: 114 RYFCLQCHVPQVPVNPIVENRF 135


>UniRef50_A5EZY0 Periplasmic nitrate reductase, cytochrome c-type protein n=67
           Tax=Gammaproteobacteria RepID=A5EZY0_VIBC3
          Length = 171

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 67/94 (71%), Gaps = 1/94 (1%)

Query: 48  RMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD 107
           + P+EQ  +  ++V QPP+IPH++  Y+V+ N N+CL CH  ++ +  GA +IS THF++
Sbjct: 72  KYPREQA-LESDFVYQPPLIPHNIRNYEVSLNANKCLACHSWKNAKEMGATKISVTHFVN 130

Query: 108 SDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
            +  V ++V+PRRYFCLQCHV QAD  P+V N F
Sbjct: 131 REDAVLSDVSPRRYFCLQCHVLQADAKPLVENDF 164


>UniRef50_A1S624 Periplasmic nitrate reductase subunit NapB n=8 Tax=Proteobacteria
           RepID=A1S624_SHEAM
          Length = 157

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 55/83 (66%)

Query: 59  NYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP 118
           NY  QPP+IPH ++GYQ+    N+C+ CH       + AP +S TH+MD D    A+++P
Sbjct: 59  NYPMQPPVIPHKIDGYQLDLKVNKCMSCHARTRTGESQAPMVSVTHYMDRDNNFLADLSP 118

Query: 119 RRYFCLQCHVPQADTAPIVGNTF 141
           RRYFC+QCHVPQ D  P+V N F
Sbjct: 119 RRYFCVQCHVPQLDAKPLVDNEF 141


>UniRef50_Q02IZ3 Cytochrome c-type protein NapB n=10 Tax=Pseudomonas
           RepID=Q02IZ3_PSEAB
          Length = 163

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 59  NYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP 118
           NY  QPP IPHS+ GY++  ++N+CL CH   +   T A  IS TH+MD DG+  A V+P
Sbjct: 63  NYPEQPPTIPHSIVGYRIDKDSNKCLSCHSRANSARTQAVMISITHYMDRDGQPLAAVSP 122

Query: 119 RRYFCLQCHVPQADTAPIVGNTF 141
           RRYFC+QCHVPQ D  P+V N F
Sbjct: 123 RRYFCVQCHVPQQDVKPLVDNRF 145


>UniRef50_A9I7N5 Periplasmic nitrate reductase, cytochrome c-type protein n=1
           Tax=Bordetella petrii DSM 12804 RepID=A9I7N5_BORPD
          Length = 151

 Score =  102 bits (253), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%)

Query: 56  MPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAE 115
           +P ++V QPP++PH+   Y VT   N+CL CH     + T +P+IS THF D+ G+  + 
Sbjct: 59  LPRDFVQQPPLVPHASSNYPVTLKFNKCLDCHAWARAQATNSPKISITHFRDAQGRELSS 118

Query: 116 VAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           V+P RYFC QCHV Q+D  P+V NTF   KG
Sbjct: 119 VSPSRYFCQQCHVTQSDAKPLVENTFQRVKG 149


>UniRef50_B6B7Q2 Periplasmic nitrate reductase, diheme cytochrome c subunit n=1
           Tax=Rhodobacterales bacterium Y4I RepID=B6B7Q2_9RHOB
          Length = 156

 Score =  101 bits (252), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 13  WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVE 72
           + A  A   +      NGV   Q  E +    G +     Q R   NY +QPP+IPH  +
Sbjct: 14  FLATTAFAQTQVSTLRNGVPLEQEGEATQI-PGIVNTDIRQVR---NYPDQPPLIPHKTD 69

Query: 73  GYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
            YQV  N+N+CL CH   +   + AP IS THFM+ +G+    V+PRRYFC QCHV Q +
Sbjct: 70  NYQVDLNSNKCLTCHSRTAVEISQAPMISVTHFMNREGQTLGAVSPRRYFCTQCHVVQTN 129

Query: 133 TAPIVGNTF 141
             P+V N F
Sbjct: 130 ARPLVENEF 138


>UniRef50_D0U4E1 Periplasmic nitrate reductase subunit NapB n=1 Tax=uncultured SUP05
           cluster bacterium RepID=D0U4E1_9GAMM
          Length = 181

 Score =  101 bits (251), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 57/83 (68%)

Query: 59  NYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP 118
           ++++QPP+IPH  +G ++T   N+CL CH  E++R   A +++ +HFM    K   EV+P
Sbjct: 94  SFIDQPPLIPHKTKGMRITMKKNKCLSCHSNENWRDADAVKMTASHFMTRSNKRLKEVSP 153

Query: 119 RRYFCLQCHVPQADTAPIVGNTF 141
           RRYFC QCHVPQ D  P++G+ +
Sbjct: 154 RRYFCTQCHVPQVDNKPLIGSDY 176


>UniRef50_Q21PN0 Periplasmic nitrate reductase subunit NapB n=1 Tax=Saccharophagus
           degradans 2-40 RepID=Q21PN0_SACD2
          Length = 172

 Score =  100 bits (250), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 74/150 (49%), Gaps = 14/150 (9%)

Query: 6   LKKALCQWTAMLALVVSGAVWAAN--GVDFSQSPEVSGTQEGAIRMPKEQDRMPLN---- 59
           L K +     ++AL  + A  A     VD     +V+  ++G     +  D  PL     
Sbjct: 8   LPKLIIATLGIVALSFASAYAAEELMHVDADGKNQVASLRKGTALNNENPDPAPLQDEQN 67

Query: 60  --------YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGK 111
                   Y  QPP IPH + GYQ+    N+C+ CH       + AP IS THFMD DG 
Sbjct: 68  KDLRFNRAYPMQPPPIPHKITGYQIDLKANKCMSCHARTRVEESQAPMISVTHFMDRDGN 127

Query: 112 VGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
             A+V+ RRYFC QCHVPQ +  P++ NTF
Sbjct: 128 FLADVSARRYFCTQCHVPQVERDPLIENTF 157


>UniRef50_D0J756 Nitrate reductase cytochrome c-type subunit n=1 Tax=Comamonas
           testosteroni CNB-2 RepID=D0J756_COMTE
          Length = 168

 Score =  100 bits (249), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 74/142 (52%), Gaps = 8/142 (5%)

Query: 8   KALCQWTAMLALVVSGAVW--AANGVDFSQS-----PEVSGTQEGAIRMPKEQD-RMPLN 59
           + L +   ML ++ +G  W  AA    F  S     P +  T+   +      D R   N
Sbjct: 5   RKLVRLVGMLLMLNTGMAWTPAAIAETFYDSARGPTPIMQATKPPVLGNAVNDDVRRTRN 64

Query: 60  YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPR 119
           Y  QPP IPH V+GYQV  N N+C+ CH       + A  +S TH+MD DG++  +V+ R
Sbjct: 65  YTWQPPTIPHRVDGYQVDKNFNKCMDCHSRTKAEISQAVPVSVTHYMDRDGRMLGQVSTR 124

Query: 120 RYFCLQCHVPQADTAPIVGNTF 141
           RYFC QCHV Q    P+V NTF
Sbjct: 125 RYFCQQCHVAQDAVRPLVSNTF 146


>UniRef50_A3D3V4 Periplasmic nitrate reductase subunit NapB n=18 Tax=Proteobacteria
           RepID=A3D3V4_SHEB5
          Length = 161

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 53/84 (63%)

Query: 59  NYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP 118
           +Y  QPP+IPH ++GYQ+    N+C+ CH       + AP +S THFMD D    AE++P
Sbjct: 63  SYPMQPPVIPHKIDGYQLDLKVNKCMACHARSRIGDSQAPMVSVTHFMDRDNNFLAELSP 122

Query: 119 RRYFCLQCHVPQADTAPIVGNTFT 142
           RRYFC QCHVPQ D   +V N F 
Sbjct: 123 RRYFCTQCHVPQLDAKLLVENDFV 146


>UniRef50_C1D9G6 Nitrate reductase n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D9G6_LARHH
          Length = 146

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 57/94 (60%)

Query: 51  KEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDG 110
           K+  R+  +YV QPP+IPH V  Y+++TN N+C+ CH    Y      R+ P+HF    G
Sbjct: 50  KDSKRIVRDYVQQPPLIPHDVSKYEISTNFNKCMDCHSAARYVEMNTTRVPPSHFKTRTG 109

Query: 111 KVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
           +  + ++P RYFC QCHVPQ D  P+V N +  S
Sbjct: 110 QELSNLSPSRYFCTQCHVPQVDARPLVNNAYQSS 143


>UniRef50_Q13I14 Periplasmic nitrate reductase subunit NapB n=2 Tax=Burkholderia
           RepID=Q13I14_BURXL
          Length = 159

 Score = 99.4 bits (246), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 53/83 (63%)

Query: 60  YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPR 119
           Y  QPP IPH ++GYQ+  N NRCL CH       +GA  ++ +H+ D  G+    ++PR
Sbjct: 61  YAQQPPTIPHKIDGYQLDRNANRCLACHARSRAAESGAVPVAVSHYTDRTGETLEHISPR 120

Query: 120 RYFCLQCHVPQADTAPIVGNTFT 142
           RYFC QCHV QAD  P+V NTFT
Sbjct: 121 RYFCTQCHVTQADAKPLVANTFT 143


>UniRef50_B6IR11 Diheme cytochrome c napB n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IR11_RHOCS
          Length = 168

 Score = 98.6 bits (244), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 63/118 (53%), Gaps = 4/118 (3%)

Query: 30  GVDFSQSPEVSGTQEGAI----RMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQ 85
           G D    P V  T E A     +   +  R   NY  QPP+IPH++ GYQV    N+CL 
Sbjct: 36  GTDTPFRPPVGFTDEAAAPPLAKEITDDRRRARNYPEQPPVIPHNIVGYQVNLQLNQCLT 95

Query: 86  CHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTP 143
           CH  +      AP +S +H+   +G+    VAPRRYFC QCHVPQ D  P+V N F P
Sbjct: 96  CHSRQYTEQVQAPMVSISHYQTREGQTLGAVAPRRYFCTQCHVPQTDARPVVENRFRP 153


>UniRef50_C7RM81 Nitrate reductase cytochrome c-type subunit (NapB) n=1
           Tax=Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1 RepID=C7RM81_9PROT
          Length = 155

 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 15  AMLALVVSGAVWAANGVDFS---QSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSV 71
           A LAL   GA  +  G D +   Q+PEV  T  G  + P  +  +   +  QPP+IPH+V
Sbjct: 17  ASLALAADGA-NSMRGSDVAAPDQAPEVK-TYSG--KRPGTEAPVARTFSTQPPVIPHAV 72

Query: 72  EGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQ 130
           E + ++    N+CL CH   +Y+   AP+I  +HF+D +GK  AE    RY C+QCHVPQ
Sbjct: 73  ENFDEINLEGNQCLDCHSAATYQKKKAPKIGDSHFLDREGKKHAEATGGRYNCVQCHVPQ 132

Query: 131 ADTAPIVGNTF 141
            D  P+V NTF
Sbjct: 133 VDAPPLVDNTF 143


>UniRef50_A4WXI9 Periplasmic nitrate reductase subunit NapB n=3 Tax=Rhodobacteraceae
           RepID=A4WXI9_RHOS5
          Length = 148

 Score = 95.5 bits (236), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 64/123 (52%), Gaps = 6/123 (4%)

Query: 22  SGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTN 81
           + AV +  G D    P+V  T        K+  R   NY  QPP++PHS++ YQ+    N
Sbjct: 30  AAAVESLRGAD----PDVDVTTAPVFHQNKQ--RFVRNYRLQPPLVPHSIDKYQIDMKAN 83

Query: 82  RCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
            CL CH        GAP +S TH+ D DG     VA RR+FC QCHVPQAD   +V N F
Sbjct: 84  ECLACHEWRKSGERGAPTLSMTHYQDRDGLQTDTVASRRWFCSQCHVPQADAPALVENLF 143

Query: 142 TPS 144
             S
Sbjct: 144 QSS 146


>UniRef50_B6R9T8 Periplasmic nitrate reductase, diheme cytochrome c subunit n=1
           Tax=Pseudovibrio sp. JE062 RepID=B6R9T8_9RHOB
          Length = 135

 Score = 91.7 bits (226), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 54/90 (60%)

Query: 55  RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGA 114
           R+   +  QPP++PH  E YQV    N+CL CH   +     AP +S TH+ D +G+   
Sbjct: 43  RVNREFRQQPPLVPHKTEAYQVDLKVNQCLTCHDWANAGEKKAPTLSMTHYADREGRQLD 102

Query: 115 EVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
           +VA  R+FC QCHVPQ +  P+V N FTPS
Sbjct: 103 QVAGTRWFCTQCHVPQVEAEPLVENEFTPS 132


>UniRef50_A6Q601 Periplasmic nitrate reductase, small subunit n=1 Tax=Nitratiruptor
           sp. SB155-2 RepID=A6Q601_NITSB
          Length = 193

 Score = 84.7 bits (208), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 32/168 (19%)

Query: 8   KALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQ------EGAIRMPKEQDRMPLNYV 61
           K L   +A +A+ ++    AA+    S+     G++      E +   P    R   +Y 
Sbjct: 4   KKLVGVSAAVAIFLAAGCGAASQKVVSEHELSYGSKGVPPKVEYSKAAPGTSQRFQRSYE 63

Query: 62  NQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKV-------- 112
           N PPMIPHS++G   +T N N CL CH     ++ GA  + PTHF D   K         
Sbjct: 64  NAPPMIPHSIDGLVPITLNNNACLGCHMPNVAKSMGATPLPPTHFKDFFFKTKEKLIKQK 123

Query: 113 -----------------GAEVAPRRYFCLQCHVPQADTAPIVGNTFTP 143
                             A++AP+RY C+QCH PQA+  P+V NTF P
Sbjct: 124 LYEDVKAYKQRLSLMAKKADIAPQRYNCVQCHAPQANAKPLVANTFKP 171


>UniRef50_B9L8L1 Periplasmic nitrate reductase, diahem cytochrome C subunit n=2
           Tax=Nautiliaceae RepID=B9L8L1_NAUPA
          Length = 157

 Score = 84.3 bits (207), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 5/124 (4%)

Query: 21  VSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTN 79
           V+G   A    D    PE+       I  P +  + P ++V  PPMIPHSVEG   +T N
Sbjct: 31  VTGIREANLNADSQNLPELKLNTTQPI--PGKVKKQPASFVTAPPMIPHSVEGMVPITKN 88

Query: 80  TNRCLQCHGVESYRTTGAPRISPTHFMDS--DGKVGAEVAPRRYFCLQCHVPQADTAPIV 137
            N CL CH  ++ ++ G   I P+HF+D+   GK  +++A  RY C  CH PQA   P++
Sbjct: 89  NNMCLNCHMPQAAKSLGVTPIPPSHFVDNFEGGKKSSKLAGSRYNCTLCHAPQAMVDPVI 148

Query: 138 GNTF 141
            N F
Sbjct: 149 ENKF 152


>UniRef50_Q2W3T4 Nitrate reductase cytochrome c-type subunit n=5 Tax=Proteobacteria
           RepID=Q2W3T4_MAGSA
          Length = 151

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 48/82 (58%)

Query: 60  YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPR 119
           Y  QPP++PH+ + Y++    N+CL+CH         AP+IS  H++D +G     V   
Sbjct: 60  YRQQPPLVPHTTDKYEIDLKVNQCLRCHEWPYSDQEKAPKISDLHYLDRNGVRQDVVNGN 119

Query: 120 RYFCLQCHVPQADTAPIVGNTF 141
           RYFC QCHVPQ D  P+V N F
Sbjct: 120 RYFCKQCHVPQNDAKPLVNNKF 141


>UniRef50_A7BM57 Periplasmic nitrate reductase beta subunit n=1 Tax=Beggiatoa sp. SS
           RepID=A7BM57_9GAMM
          Length = 140

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 38  EVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGA 97
           E+S   E   R+P +       Y  Q P+IPH +EGY++T   N+CL CH          
Sbjct: 42  ELSAITEWK-RVPSDFQTFLPAYEQQAPLIPHFIEGYKITLEGNKCLTCH---------K 91

Query: 98  PRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
             +SPTH  D +GKV   V  R YFC  CHV Q D  P++ NTF
Sbjct: 92  KTLSPTHLKDRNGKVLDTVDNRLYFCTLCHVSQVDAQPLIDNTF 135


>UniRef50_A7BUA2 Periplasmic nitrate reductase small subunit n=1 Tax=Beggiatoa sp.
           PS RepID=A7BUA2_9GAMM
          Length = 141

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 8/95 (8%)

Query: 48  RMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQ-CHGVESYRTTGAPRISPTHFM 106
           + P E +  PLNY  Q  +IPH +EG ++   +N+C+  CH +         + S +H+ 
Sbjct: 49  KFPVEPESFPLNYEEQAALIPHLIEGQRIDLESNQCMDSCHTI-------LKKPSASHYE 101

Query: 107 DSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
           D DG +  E+  RRY C  CH+PQ D  P+  N F
Sbjct: 102 DRDGNILDEIDSRRYICTSCHLPQTDAQPLRENLF 136


>UniRef50_B2V811 Nitrate reductase cytochrome c-type subunit (NapB) n=2
           Tax=Hydrogenothermaceae RepID=B2V811_SULSY
          Length = 216

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 46/86 (53%), Gaps = 2/86 (2%)

Query: 60  YVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD-SDGKVGAEVA 117
           Y N PP IPHS EG   +T   N CL CH  E  +   A  I PTHF++   G+    + 
Sbjct: 84  YENAPPQIPHSTEGLLPITKENNACLGCHMPEVAKAVKATPIPPTHFINFRTGQKLNHLY 143

Query: 118 PRRYFCLQCHVPQADTAPIVGNTFTP 143
             RY C QCH PQ D  P+V NTF P
Sbjct: 144 QGRYNCTQCHAPQLDVQPVVKNTFKP 169


>UniRef50_Q4HRN5 NapB periplasmic nitrate reductase n=2 Tax=Campylobacter
           RepID=Q4HRN5_CAMUP
          Length = 173

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 52  EQDRMPLNYVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--S 108
           E   +  ++ N PP+IPH+++G   +T  +N CL CH     +  GA     +H+ D   
Sbjct: 57  ESALLERSFENAPPLIPHNLDGMLPITKESNSCLTCHDKAIAQDVGAIAAPASHYYDFWK 116

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
           +   G  ++  RY C QCHV Q+D  P+VGNTF
Sbjct: 117 NKPTGDVISEIRYNCTQCHVAQSDAKPLVGNTF 149


>UniRef50_B9KCP9 Periplasmic nitrate reductase, small subunit, cytochrome c-type
           protein n=3 Tax=Campylobacterales RepID=B9KCP9_CAMLR
          Length = 172

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 49  MPKEQDRMPLNYVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHFMD 107
           M  E   +  ++ N PP+IPH++E    +T + N CL CH     +  GA  +  +H+ D
Sbjct: 53  MAGESVLIERSFENAPPLIPHTLEDMLPITKDNNICLSCHDQSVAKDVGATPLPKSHYYD 112

Query: 108 --SDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
              +      ++  R+ C QCHVPQ+D  P+VGN+F
Sbjct: 113 FRKNKSTKDMISDARFNCTQCHVPQSDAKPLVGNSF 148


>UniRef50_A1RG48 Periplasmic nitrate reductase subunit NapB n=20 Tax=Shewanella
           RepID=A1RG48_SHESW
          Length = 143

 Score = 69.3 bits (168), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 18/140 (12%)

Query: 16  MLALVVSGAVWAANGVDFSQSPEVSGTQEG--AIRMPKEQDRMPL----------NYVNQ 63
           + A+VV+         D + +P    +  G  AI   +  D MP+          ++ +Q
Sbjct: 7   LAAIVVAIGGCTGQKADTNSAPVTINSLAGTSAITDIRPADAMPVFPTRGAALERSFSDQ 66

Query: 64  PPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFC 123
           PP+IPH  + Y++T + N CL CH  E      A  ++ +H +D  G +  +     YFC
Sbjct: 67  PPLIPHK-DDYKITLDKNGCLSCHSWEKAERMKATPVAKSHVIDDKGNLNGQ----NYFC 121

Query: 124 LQCHVPQADT-APIVGNTFT 142
            QCHV QA+  AP+V N F+
Sbjct: 122 TQCHVAQAENKAPLVENKFS 141


>UniRef50_A8UYP3 Periplasmic nitrate reductase small subunit (Cytochrome C-type
           protein) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1
           RepID=A8UYP3_9AQUI
          Length = 180

 Score = 69.3 bits (168), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 60  YVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTH-----FMDSDGKVG 113
           Y N PP IPHSVEG   +    N CL CH  +  ++ GA  I  TH     F     K  
Sbjct: 69  YENAPPQIPHSVEGLIPIKPGQNACLGCHMPDVAKSVGATPIPKTHIALDLFTKGGKKKE 128

Query: 114 AEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
            ++ P RY C+ CH  QAD  P+V N F P 
Sbjct: 129 LKIDPARYQCVMCHAAQADAPPLVKNVFKPE 159


>UniRef50_B9D0H5 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=2
           Tax=Campylobacter RepID=B9D0H5_WOLRE
          Length = 227

 Score = 68.6 bits (166), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 52  EQDRMPLNYVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--- 107
           E  R    + N PPMIPH +EG   +TT+ N C+ CH  E     GA  I  +H      
Sbjct: 111 EAQRYERAFENAPPMIPHDLEGLMPITTDNNMCISCHMPEVAEGIGATSIPKSHLYSIRF 170

Query: 108 SDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTP 143
           S+ K G +++  R+ C  CH PQA+  P   N F P
Sbjct: 171 SEDK-GGQLSQDRFVCTVCHAPQANIEPKFKNNFVP 205


>UniRef50_D1B0Z1 Nitrate reductase cytochrome c-type subunit (NapB) n=3
           Tax=Campylobacterales RepID=D1B0Z1_SULD5
          Length = 173

 Score = 68.2 bits (165), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 60  YVNQPPMIPHSVEG-YQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD-SDGKVGAEVA 117
           + N PPMIPH VEG  +++   N C+ CH  E      A  I  +HF D    K+  E++
Sbjct: 66  FENAPPMIPHDVEGMLEISKENNACIGCHLPEVAEAVKATPIPKSHFYDMRTKKMLGELS 125

Query: 118 PRRYFCLQCHVPQADTAPIVGNTFTP 143
             R+ C  CH PQ++  P+V N F+P
Sbjct: 126 QARFNCNACHAPQSNNQPLVKNEFSP 151


>UniRef50_A0RQ33 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=2
           Tax=Campylobacter RepID=A0RQ33_CAMFF
          Length = 177

 Score = 65.1 bits (157), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)

Query: 60  YVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHF--MDSDGKVGAEV 116
           + N PP+I HS++G   +T  +N CL CH  E  +  G   +  +H   + +   +  +V
Sbjct: 70  FENAPPLISHSLDGLVPITIESNSCLSCHVPEVAKDAGTIPVPKSHLVVLRTGKDLNGQV 129

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFTPSKGY 147
           +  R+ C QCHVPQAD  P+  N F     Y
Sbjct: 130 SDERFNCTQCHVPQADVKPLKKNNFKADFRY 160


>UniRef50_A6Q703 Periplasmic nitrate reductase, small subunit n=2
           Tax=Epsilonproteobacteria RepID=A6Q703_SULNB
          Length = 322

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 50/117 (42%), Gaps = 35/117 (29%)

Query: 60  YVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHFMD----------- 107
           YVN PPMIPHSVEG   +T + N+CL CH  +  +  GA  I P+HF +           
Sbjct: 182 YVNAPPMIPHSVEGLLPITKDNNQCLGCHMPDVAKGVGATPIPPSHFTNYRPTTVYKNGE 241

Query: 108 ---SDGKVGAEVAPR--------------------RYFCLQCHVPQADTAPIVGNTF 141
                 KVG +                        R+ C QCH PQA+    V NTF
Sbjct: 242 LVKEGKKVGIQKGDMGNVGDIKLAKVKKLNHLYQGRFNCSQCHAPQANVKTAVANTF 298


>UniRef50_A7GZP2 Periplasmic nitrate reductase, diheme cytochrome c subunit n=15
           Tax=Campylobacter RepID=A7GZP2_CAMC5
          Length = 175

 Score = 61.2 bits (147), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 8/110 (7%)

Query: 38  EVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTG 96
           +++ T+E A  M K  DR   ++ N PP IPH  EG   +T + N C+ CH  E  + +G
Sbjct: 48  DINYTKEPA-GMAKRFDR---SFENAPPFIPHDTEGLVPITKDLNMCVTCHMPEFAKDSG 103

Query: 97  APRISPTHFMDSDGK--VGAEVAPRRYFCLQCHVP-QADTAPIVGNTFTP 143
           A  I  +H  D   K  +  ++   RY C  CHV  Q+    +VGN F P
Sbjct: 104 ATPIPASHLYDIRNKKDLAGQLDDERYVCTTCHVEQQSGITQLVGNKFKP 153


>UniRef50_A8ERQ6 Periplasmic nitrate reductase, small subunit, cytochrome c-type
           protein NapB n=1 Tax=Arcobacter butzleri RM4018
           RepID=A8ERQ6_ARCB4
          Length = 201

 Score = 57.8 bits (138), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 28/112 (25%)

Query: 60  YVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHF--------MDSDG 110
           + N PPMIPH VEG   +  N N+C  CH      + GA  I  +HF        +DS+G
Sbjct: 68  FENAPPMIPHDVEGMLPIEINNNQCTACHDPLVAESMGATPIPKSHFTSFREEVKLDSNG 127

Query: 111 KVGAE-------------------VAPRRYFCLQCHVPQADTAPIVGNTFTP 143
            +  E                   ++  R+ C  CH PQ+++A +  N F+P
Sbjct: 128 NLEREGKVVENSSDLKGVKKPLDHLSNARFNCSACHAPQSNSANVPKNNFSP 179


>UniRef50_C5EY43 NapB periplasmic nitrate reductase n=2 Tax=Helicobacter
           RepID=C5EY43_9HELI
          Length = 174

 Score = 56.6 bits (135), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 52  EQDRMPLNYVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--S 108
           E   +  ++ N PPMI H+++G   +T + N C  CH  E      A  +  +HF +   
Sbjct: 58  ESTLIERSFENAPPMISHNLDGMLPITRDNNACTSCHLPEIAEAVAATPMPKSHFYNFRE 117

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
           +  +  ++   R+ C+ CH  Q D  P+VGN F
Sbjct: 118 NKNLDGQMDENRFNCVICHTTQVDAPPLVGNNF 150


>UniRef50_Q30QD7 Periplasmic nitrate reductase subunit NapB n=2
           Tax=Campylobacterales RepID=Q30QD7_SULDN
          Length = 236

 Score = 48.9 bits (115), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 23/107 (21%)

Query: 60  YVNQPPMIPHSVEGYQ-VTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVG----- 113
           + + PPMIPH   G   + +  NRC+ CH  E     GA  I  +HF D   +       
Sbjct: 78  FQDAPPMIPHDTVGMLPIKSEDNRCVTCHMPEIAGAMGATPIPVSHFTDFRPRAKLVNNE 137

Query: 114 -----------------AEVAPRRYFCLQCHVPQADTAPIVGNTFTP 143
                            +++   R+ C QCH PQ+    +V NTF P
Sbjct: 138 VVIATDTYKNETQIVKKSDLQNARFNCNQCHAPQSQGNLLVENTFEP 184


>UniRef50_A4N8U4 Diheme cytochrome C NapB n=3 Tax=Haemophilus influenzae
          RepID=A4N8U4_HAEIN
          Length = 106

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 13 WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVE 72
          +TA+ A  +  +   A G D +Q+ E           P++ +   LNYVNQPPM+PHSV 
Sbjct: 13 FTALFAGSLMASDAPAVGKDLTQAAE--NIPPAFHNAPRQGELPALNYVNQPPMVPHSVA 70

Query: 73 GYQVT 77
           YQVT
Sbjct: 71 NYQVT 75


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P0ABL3 Diheme cytochrome c napB n=142 Tax=Enterobacteri...   232   2e-60
UniRef50_C4K978 Resolvase domain protein n=2 Tax=Rhodocyclaceae ...   193   2e-48
UniRef50_A0L804 Periplasmic nitrate reductase subunit NapB n=1 T...   187   1e-46
UniRef50_P44654 Diheme cytochrome c napB n=21 Tax=Pasteurellacea...   181   7e-45
UniRef50_P39186 Diheme cytochrome c napB n=5 Tax=Burkholderiales...   176   3e-43
UniRef50_Q21PN0 Periplasmic nitrate reductase subunit NapB n=1 T...   175   3e-43
UniRef50_D0IAV4 Nitrate reductase cytochrome c550-type subunit n...   175   4e-43
UniRef50_A0EJJ6 Nitrate reductase n=1 Tax=uncultured bacterium p...   172   3e-42
UniRef50_Q47A88 Periplasmic nitrate reductase subunit NapB n=1 T...   170   1e-41
UniRef50_D0J756 Nitrate reductase cytochrome c-type subunit n=1 ...   170   1e-41
UniRef50_B5ZZF7 Nitrate reductase cytochrome c-type subunit (Nap...   170   1e-41
UniRef50_A0KIM4 PeriplasmiC nitrate reductase, diheme cytochrome...   167   1e-40
UniRef50_B6B7Q2 Periplasmic nitrate reductase, diheme cytochrome...   166   2e-40
UniRef50_B1Y6A3 Nitrate reductase cytochrome c-type subunit (Nap...   166   3e-40
UniRef50_A1S624 Periplasmic nitrate reductase subunit NapB n=8 T...   165   4e-40
UniRef50_Q487G5 Periplasmic nitrate reductase, cytochrome c-type...   164   7e-40
UniRef50_A3D3V4 Periplasmic nitrate reductase subunit NapB n=18 ...   164   1e-39
UniRef50_B6IR11 Diheme cytochrome c napB n=1 Tax=Rhodospirillum ...   162   2e-39
UniRef50_Q8VU46 Periplasmic nitrate reductase small diheme cytoc...   162   3e-39
UniRef50_A5EZY0 Periplasmic nitrate reductase, cytochrome c-type...   162   3e-39
UniRef50_Q56351 Diheme cytochrome c napB n=2 Tax=Paracoccus RepI...   162   3e-39
UniRef50_B3R8B3 Nitrate reductase (NAP)small subunit, Diheme cyt...   161   6e-39
UniRef50_A6Q601 Periplasmic nitrate reductase, small subunit n=1...   157   7e-38
UniRef50_A4WXI9 Periplasmic nitrate reductase subunit NapB n=3 T...   157   1e-37
UniRef50_D1B0Z1 Nitrate reductase cytochrome c-type subunit (Nap...   152   3e-36
UniRef50_A1K382 Probable diheme cytochrome C n=1 Tax=Azoarcus sp...   151   6e-36
UniRef50_Q53177 Diheme cytochrome c napB n=5 Tax=Alphaproteobact...   151   6e-36
UniRef50_B6R9T8 Periplasmic nitrate reductase, diheme cytochrome...   150   9e-36
UniRef50_C1D9G6 Nitrate reductase n=1 Tax=Laribacter hongkongens...   150   1e-35
UniRef50_Q13I14 Periplasmic nitrate reductase subunit NapB n=2 T...   149   2e-35
UniRef50_D0U4E1 Periplasmic nitrate reductase subunit NapB n=1 T...   149   2e-35
UniRef50_A6VQY4 Nitrate reductase cytochrome c-type subunit (Nap...   149   3e-35
UniRef50_Q02IZ3 Cytochrome c-type protein NapB n=10 Tax=Pseudomo...   149   4e-35
UniRef50_A9I7N5 Periplasmic nitrate reductase, cytochrome c-type...   148   6e-35
UniRef50_B9KCP9 Periplasmic nitrate reductase, small subunit, cy...   146   2e-34
UniRef50_C7RM81 Nitrate reductase cytochrome c-type subunit (Nap...   144   9e-34
UniRef50_B2V811 Nitrate reductase cytochrome c-type subunit (Nap...   142   2e-33
UniRef50_Q4HRN5 NapB periplasmic nitrate reductase n=2 Tax=Campy...   141   5e-33
UniRef50_Q2W3T4 Nitrate reductase cytochrome c-type subunit n=5 ...   140   1e-32
UniRef50_B9L8L1 Periplasmic nitrate reductase, diahem cytochrome...   140   1e-32
UniRef50_A0RQ33 PeriplasmiC nitrate reductase, diheme cytochrome...   137   8e-32
UniRef50_A7BM57 Periplasmic nitrate reductase beta subunit n=1 T...   137   1e-31
UniRef50_C5EY43 NapB periplasmic nitrate reductase n=2 Tax=Helic...   137   1e-31
UniRef50_A1RG48 Periplasmic nitrate reductase subunit NapB n=20 ...   135   6e-31
UniRef50_A7BUA2 Periplasmic nitrate reductase small subunit n=1 ...   134   1e-30
UniRef50_B9D0H5 PeriplasmiC nitrate reductase, diheme cytochrome...   132   3e-30
UniRef50_A8UYP3 Periplasmic nitrate reductase small subunit (Cyt...   132   4e-30
UniRef50_A7GZP2 Periplasmic nitrate reductase, diheme cytochrome...   130   1e-29
UniRef50_A8ERQ6 Periplasmic nitrate reductase, small subunit, cy...   127   1e-28
UniRef50_A6Q703 Periplasmic nitrate reductase, small subunit n=2...   125   5e-28
UniRef50_Q30QD7 Periplasmic nitrate reductase subunit NapB n=2 T...   122   5e-27
UniRef50_A4N8U4 Diheme cytochrome C NapB n=3 Tax=Haemophilus inf...    65   5e-10

Sequences not found previously or not previously below threshold:

UniRef50_A9FEA0 Diheme cytochrome C n=1 Tax=Sorangium cellulosum...    54   1e-06
UniRef50_A7TBY3 Predicted protein n=2 Tax=cellular organisms Rep...    43   0.003
UniRef50_C8WHW4 Putative uncharacterized protein n=1 Tax=Eggerth...    41   0.011
UniRef50_A1WWS9 Respiratory nitrite reductase (Cytochrome; ammon...    40   0.017
UniRef50_A8VWV9 Nitrite reductase (Cytochrome; ammonia-forming) ...    40   0.020
UniRef50_A6TSA2 Nitrite reductase (Cytochrome; ammonia-forming) ...    40   0.024
UniRef50_A5GB58 Putative uncharacterized protein n=2 Tax=Geobact...    40   0.025
UniRef50_A1S9Y6 Putative uncharacterized protein n=3 Tax=Shewane...    39   0.044
UniRef50_C7N4I1 Putative uncharacterized protein n=1 Tax=Slackia...    39   0.055
UniRef50_A6Q6U7 Putative uncharacterized protein n=1 Tax=Sulfuro...    39   0.072
UniRef50_D0WFP4 Putative lipoprotein n=1 Tax=Slackia exigua ATCC...    39   0.072
UniRef50_B5EIT6 Putative uncharacterized protein n=4 Tax=Geobact...    38   0.098

>UniRef50_P0ABL3 Diheme cytochrome c napB n=142 Tax=Enterobacteriaceae
           RepID=NAPB_ECOLI
          Length = 149

 Score =  232 bits (592), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
           MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY
Sbjct: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
           VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR
Sbjct: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120

Query: 121 YFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           YFCLQCHVPQADTAPIVGNTFTPSKGYGK
Sbjct: 121 YFCLQCHVPQADTAPIVGNTFTPSKGYGK 149


>UniRef50_C4K978 Resolvase domain protein n=2 Tax=Rhodocyclaceae RepID=C4K978_THASP
          Length = 150

 Score =  193 bits (490), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 8/149 (5%)

Query: 2   KSHDLKKALCQWTAMLALV----VSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMP 57
           ++ +L  AL       A+V    ++ AV +  G D ++       Q G  +   +Q  + 
Sbjct: 4   QTRNLVLALVAAVGFGAMVPPAAMAQAVKSIRGADVAEQE----LQVGNYKPIPDQAPIE 59

Query: 58  LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVA 117
            +YV QPP+IPH VEGY+VT N N+C+ CH    Y+ +GA ++S THF D DG   + ++
Sbjct: 60  RDYVQQPPLIPHKVEGYEVTINFNKCMDCHAWSRYKESGATKVSLTHFKDRDGGELSNIS 119

Query: 118 PRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           PRRYFC+QCHVPQ D  P+VGN F  ++G
Sbjct: 120 PRRYFCMQCHVPQTDAKPLVGNKFQRAEG 148


>UniRef50_A0L804 Periplasmic nitrate reductase subunit NapB n=1 Tax=Magnetococcus
           sp. MC-1 RepID=A0L804_MAGSM
          Length = 152

 Score =  187 bits (475), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/140 (40%), Positives = 78/140 (55%), Gaps = 5/140 (3%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGA-----IRMPKEQDRMPLNYVNQP 64
           +  W A  AL+   +  +AN         V G    A      +  ++Q  +  +Y+ QP
Sbjct: 9   VMGWMACFALLGVVSTASANEGGVQSLRGVHGLDSNASEPDFKKWNEDQKPIKRDYLQQP 68

Query: 65  PMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCL 124
           P+IPHSVE Y++    NRCL CH  E+Y+ +GA +IS THF D  G   A+V+P RYFC 
Sbjct: 69  PLIPHSVEQYRINLRQNRCLSCHSWETYKQSGATKISLTHFRDRYGSELADVSPGRYFCT 128

Query: 125 QCHVPQADTAPIVGNTFTPS 144
           QCHVPQ +  P+V NTF P 
Sbjct: 129 QCHVPQRNAQPLVENTFKPV 148


>UniRef50_P44654 Diheme cytochrome c napB n=21 Tax=Pasteurellaceae RepID=NAPB_HAEIN
          Length = 150

 Score =  181 bits (459), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 75/148 (50%), Positives = 93/148 (62%), Gaps = 3/148 (2%)

Query: 3   SHDLKKALCQ-WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYV 61
           +  + K L   +TA+ A  +  +   A G D +Q+ E           P++ +   LNYV
Sbjct: 5   TKQVSKILAGLFTALFAGSLMASDAPAVGKDLTQAAE--NIPPAFHNAPRQGELPALNYV 62

Query: 62  NQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRY 121
           NQPPM+PHSV  YQVT N N+CL CH  E+ R +GA RISPTHFMD DGKVG+  +PRRY
Sbjct: 63  NQPPMVPHSVANYQVTKNVNQCLNCHSPENSRLSGATRISPTHFMDRDGKVGSSSSPRRY 122

Query: 122 FCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           FCLQCHV QA+  PIV N F P KGYG 
Sbjct: 123 FCLQCHVSQANVDPIVPNDFKPMKGYGN 150


>UniRef50_P39186 Diheme cytochrome c napB n=5 Tax=Burkholderiales RepID=NAPB_RALEH
          Length = 169

 Score =  176 bits (445), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSP-EVSGTQEGAIRMPKEQD--RMPLNYVNQPPM 66
           L    AM A+       A   VD  + P  ++      +  P E    R   NY  QPP 
Sbjct: 17  LLAALAMQAIFFPAPARAQGLVDAMRGPTAIANEPRAPLLYPTENKDIRRTRNYTMQPPT 76

Query: 67  IPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQC 126
           IPH ++GYQ+  + NRC+ CH       T A  +S TH+MD D  V A+V+PRRYFC QC
Sbjct: 77  IPHKIDGYQLDKDFNRCMFCHARTRTEETQAIPVSITHYMDRDNNVLADVSPRRYFCTQC 136

Query: 127 HVPQADTAPIVGNTFT 142
           HVPQADT P++GN F 
Sbjct: 137 HVPQADTKPLIGNNFV 152


>UniRef50_Q21PN0 Periplasmic nitrate reductase subunit NapB n=1 Tax=Saccharophagus
           degradans 2-40 RepID=Q21PN0_SACD2
          Length = 172

 Score =  175 bits (444), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 14/154 (9%)

Query: 3   SHDLKKALCQWTAMLALVVSGAVWAAN--GVDFSQSPEVSGTQEGAIRMPKEQDRMP--- 57
           +  L K +     ++AL  + A  A     VD     +V+  ++G     +  D  P   
Sbjct: 5   TRHLPKLIIATLGIVALSFASAYAAEELMHVDADGKNQVASLRKGTALNNENPDPAPLQD 64

Query: 58  ---------LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDS 108
                      Y  QPP IPH + GYQ+    N+C+ CH       + AP IS THFMD 
Sbjct: 65  EQNKDLRFNRAYPMQPPPIPHKITGYQIDLKANKCMSCHARTRVEESQAPMISVTHFMDR 124

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFT 142
           DG   A+V+ RRYFC QCHVPQ +  P++ NTF 
Sbjct: 125 DGNFLADVSARRYFCTQCHVPQVERDPLIENTFK 158


>UniRef50_D0IAV4 Nitrate reductase cytochrome c550-type subunit n=1 Tax=Grimontia
           hollisae CIP 101886 RepID=D0IAV4_VIBHO
          Length = 150

 Score =  175 bits (444), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/146 (51%), Positives = 95/146 (65%), Gaps = 7/146 (4%)

Query: 11  CQWTAMLALVVSGAVWAANG-----VDFSQSPEVSGTQ--EGAIRMPKEQDRMPLNYVNQ 63
             ++ +LA+++  A  AA            + E+  T    G   +PK QDR  LNYVNQ
Sbjct: 5   LTFSLVLAVLLGSATVAAVEEGTGIKSLRGATEIGETNVAPGIKSVPKNQDRFSLNYVNQ 64

Query: 64  PPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFC 123
           PPMIPH+++GYQV  + N CLQCH V+ YR TGAPR+SPTHFMD D KV  E++PRRYFC
Sbjct: 65  PPMIPHAIDGYQVNQSNNACLQCHDVDVYRKTGAPRVSPTHFMDRDNKVLTEISPRRYFC 124

Query: 124 LQCHVPQADTAPIVGNTFTPSKGYGK 149
           LQCHVPQA T  +V N F P+  +GK
Sbjct: 125 LQCHVPQAHTDELVENEFVPAGKFGK 150


>UniRef50_A0EJJ6 Nitrate reductase n=1 Tax=uncultured bacterium pES01019D12
           RepID=A0EJJ6_9BACT
          Length = 148

 Score =  172 bits (435), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 3/144 (2%)

Query: 5   DLKKALCQWTAMLALVVSGAVWAANGVDFSQ---SPEVSGTQEGAIRMPKEQDRMPLNYV 61
           + K+ +    A++ +   G + +   V   +   S E + +   + R   +   +  ++V
Sbjct: 2   NGKRLIVMTLAIIMVAYGGQLLSQENVATMRGVKSIEDTSSAPESKRWEPDSSPLTRDFV 61

Query: 62  NQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRY 121
            QPP+IPHS +GYQ+    N+CL CH   +++  GA +IS THF D DG   + V+  RY
Sbjct: 62  QQPPLIPHSTKGYQINLKFNKCLTCHSWANHKEAGATKISLTHFKDRDGNELSNVSASRY 121

Query: 122 FCLQCHVPQADTAPIVGNTFTPSK 145
           FC QCHVPQ DTAP+V N F P K
Sbjct: 122 FCTQCHVPQRDTAPLVENEFEPVK 145


>UniRef50_Q47A88 Periplasmic nitrate reductase subunit NapB n=1 Tax=Dechloromonas
           aromatica RCB RepID=Q47A88_DECAR
          Length = 146

 Score =  170 bits (431), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/110 (40%), Positives = 72/110 (65%)

Query: 40  SGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPR 99
             ++    R  K+++ +P N+  QPP+IPHS++GY +T N N+C+ CH  E    TGA +
Sbjct: 37  GNSKVDMFRPEKDKESIPRNFQKQPPLIPHSIKGYNITQNFNKCMDCHSKERAEETGATK 96

Query: 100 ISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           ++ +H++D + K    ++PRRYFC+QCHVPQ D  P+V NT+ P+   G+
Sbjct: 97  VAKSHYLDREDKKLTNISPRRYFCMQCHVPQFDAKPLVENTYKPAAKRGE 146


>UniRef50_D0J756 Nitrate reductase cytochrome c-type subunit n=1 Tax=Comamonas
           testosteroni CNB-2 RepID=D0J756_COMTE
          Length = 168

 Score =  170 bits (431), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 8/146 (5%)

Query: 5   DLKKALCQWTAMLALVVSGAVW--AANGVDFSQS-----PEVSGTQEGAIRMPKEQD-RM 56
           +  + L +   ML ++ +G  W  AA    F  S     P +  T+   +      D R 
Sbjct: 2   NFFRKLVRLVGMLLMLNTGMAWTPAAIAETFYDSARGPTPIMQATKPPVLGNAVNDDVRR 61

Query: 57  PLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
             NY  QPP IPH V+GYQV  N N+C+ CH       + A  +S TH+MD DG++  +V
Sbjct: 62  TRNYTWQPPTIPHRVDGYQVDKNFNKCMDCHSRTKAEISQAVPVSVTHYMDRDGRMLGQV 121

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFT 142
           + RRYFC QCHV Q    P+V NTF 
Sbjct: 122 STRRYFCQQCHVAQDAVRPLVSNTFE 147


>UniRef50_B5ZZF7 Nitrate reductase cytochrome c-type subunit (NapB) n=7
           Tax=Rhizobiaceae RepID=B5ZZF7_RHILW
          Length = 167

 Score =  170 bits (431), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 12/160 (7%)

Query: 1   MKSHDLKKALCQ---WTAMLA-LVVSGAVWAANGVDFSQSPEVSGTQEGAIRMP------ 50
           M+  D  +   +   WTA+ A L+V     +   V     P++ G  E     P      
Sbjct: 1   MRGQDSPRRRLRRPEWTAIAAGLLVFVTTASIAQVVTQNVPQLQGPPEAMQSAPAAVLPR 60

Query: 51  --KEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDS 108
              +  R    Y +QPP+IPHS+EGY+++ N NRCL CH  E  + +GAP IS TH+M  
Sbjct: 61  WVVDDRRQMRAYPDQPPIIPHSIEGYELSVNANRCLSCHKREFTQDSGAPMISVTHYMTR 120

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYG 148
           DG++ A+V+PRRYFC  CHVPQAD  P+V + F      G
Sbjct: 121 DGQMIADVSPRRYFCTACHVPQADIKPLVPSMFKDMSELG 160


>UniRef50_A0KIM4 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=3
           Tax=Gammaproteobacteria RepID=A0KIM4_AERHH
          Length = 151

 Score =  167 bits (422), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 13/149 (8%)

Query: 8   KALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQ-----------EGAIRMPKEQDRM 56
           K L    AMLA +++G++ AA     + +  +   +                  K+ D  
Sbjct: 2   KKLIG--AMLACLMAGSLMAAVPEITNSTGGIKSERGNTDLVTDADAAPMKNFRKDGDLY 59

Query: 57  PLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
              Y++QPP+IPH    Y+V    N+CL CH  ++     AP+ISPTHF   DG    EV
Sbjct: 60  DRQYMHQPPLIPHDTRNYEVDNKVNKCLACHSFKNASAMKAPKISPTHFETRDGMTLGEV 119

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFTPSK 145
           +PRRYFCLQCHVPQAD  P+V NTF P +
Sbjct: 120 SPRRYFCLQCHVPQADAKPLVENTFKPVE 148


>UniRef50_B6B7Q2 Periplasmic nitrate reductase, diheme cytochrome c subunit n=1
           Tax=Rhodobacterales bacterium Y4I RepID=B6B7Q2_9RHOB
          Length = 156

 Score =  166 bits (420), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 13  WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVE 72
           + A  A   +      NGV   Q  E +        +     R   NY +QPP+IPH  +
Sbjct: 14  FLATTAFAQTQVSTLRNGVPLEQEGEATQIP----GIVNTDIRQVRNYPDQPPLIPHKTD 69

Query: 73  GYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
            YQV  N+N+CL CH   +   + AP IS THFM+ +G+    V+PRRYFC QCHV Q +
Sbjct: 70  NYQVDLNSNKCLTCHSRTAVEISQAPMISVTHFMNREGQTLGAVSPRRYFCTQCHVVQTN 129

Query: 133 TAPIVGNTFT 142
             P+V N F 
Sbjct: 130 ARPLVENEFV 139


>UniRef50_B1Y6A3 Nitrate reductase cytochrome c-type subunit (NapB) n=1
           Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A3_LEPCP
          Length = 161

 Score =  166 bits (419), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 66/112 (58%)

Query: 35  QSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRT 94
            +P          R  ++      ++V QPP+IPH+  GYQ+T N N+C+ CH  +  + 
Sbjct: 48  GTPLNQDNPPEGARQERDHGPADRDFVQQPPLIPHTTAGYQITKNYNKCMDCHAWQKTKV 107

Query: 95  TGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           +GA ++S THF   +G+    ++PRRYFC QCHVPQ D  P++ NTF  ++G
Sbjct: 108 SGATKVSVTHFRTREGQELDNISPRRYFCTQCHVPQTDARPLIDNTFQRARG 159


>UniRef50_A1S624 Periplasmic nitrate reductase subunit NapB n=8 Tax=Proteobacteria
           RepID=A1S624_SHEAM
          Length = 157

 Score =  165 bits (417), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSP-EVSGTQEGAIRMPKEQDRMPLN 59
           MK+     AL    A   L  +  V         Q+P  V  T     ++  +  +   N
Sbjct: 1   MKTMKTLSAL-ALVAFACLANASTVTDEKIATLRQAPLNVEVTPPAMQQVMNKDVKQARN 59

Query: 60  YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPR 119
           Y  QPP+IPH ++GYQ+    N+C+ CH       + AP +S TH+MD D    A+++PR
Sbjct: 60  YPMQPPVIPHKIDGYQLDLKVNKCMSCHARTRTGESQAPMVSVTHYMDRDNNFLADLSPR 119

Query: 120 RYFCLQCHVPQADTAPIVGNTF 141
           RYFC+QCHVPQ D  P+V N F
Sbjct: 120 RYFCVQCHVPQLDAKPLVDNEF 141


>UniRef50_Q487G5 Periplasmic nitrate reductase, cytochrome c-type subunit n=3
           Tax=Gammaproteobacteria RepID=Q487G5_COLP3
          Length = 167

 Score =  164 bits (416), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 13/146 (8%)

Query: 10  LCQWTAMLALVVSGAVWA--ANGVDFSQSPEVSGTQEG-AIRMPKEQDRMP--------- 57
           L    ++L L VS  +++  AN  D      V+  ++   I + KE + +P         
Sbjct: 6   LAAIASLLVLAVSPIMYSLNANAADKETVNSVATLRDATPIDVQKEPNIIPKVINKDIKQ 65

Query: 58  -LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
             NY  QPP+IPH+   Y+V  N N+C+ CH       + AP +S TH+MD DG   AEV
Sbjct: 66  GRNYPMQPPVIPHTTRSYEVNKNNNKCMSCHSRHRTEKSQAPMVSVTHYMDRDGNFLAEV 125

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFT 142
           +PRRYFC QCHV Q D  P+V NTF 
Sbjct: 126 SPRRYFCNQCHVTQLDAEPLVENTFV 151


>UniRef50_A3D3V4 Periplasmic nitrate reductase subunit NapB n=18 Tax=Proteobacteria
           RepID=A3D3V4_SHEB5
          Length = 161

 Score =  164 bits (414), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 6/147 (4%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANG----VDFSQSPEVSGTQEGAIRMPKEQDRM 56
           MK+  L  A     A  +L+++    A+          Q+P        A++  +  D  
Sbjct: 1   MKTLQLVSA-IGLLAFGSLMMTAVSAASIPDEKIATMRQAPIDVEPTPPAMQNVRNTDVK 59

Query: 57  P-LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAE 115
              +Y  QPP+IPH ++GYQ+    N+C+ CH       + AP +S THFMD D    AE
Sbjct: 60  EVRSYPMQPPVIPHKIDGYQLDLKVNKCMACHARSRIGDSQAPMVSVTHFMDRDNNFLAE 119

Query: 116 VAPRRYFCLQCHVPQADTAPIVGNTFT 142
           ++PRRYFC QCHVPQ D   +V N F 
Sbjct: 120 LSPRRYFCTQCHVPQLDAKLLVENDFV 146


>UniRef50_B6IR11 Diheme cytochrome c napB n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IR11_RHOCS
          Length = 168

 Score =  162 bits (411), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/126 (39%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 22  SGAVWAANGVDFSQSPEVSGTQEGAI----RMPKEQDRMPLNYVNQPPMIPHSVEGYQVT 77
           +       G D    P V  T E A     +   +  R   NY  QPP+IPH++ GYQV 
Sbjct: 28  AQEGTGRAGTDTPFRPPVGFTDEAAAPPLAKEITDDRRRARNYPEQPPVIPHNIVGYQVN 87

Query: 78  TNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIV 137
              N+CL CH  +      AP +S +H+   +G+    VAPRRYFC QCHVPQ D  P+V
Sbjct: 88  LQLNQCLTCHSRQYTEQVQAPMVSISHYQTREGQTLGAVAPRRYFCTQCHVPQTDARPVV 147

Query: 138 GNTFTP 143
            N F P
Sbjct: 148 ENRFRP 153


>UniRef50_Q8VU46 Periplasmic nitrate reductase small diheme cytochrome c subunit n=1
           Tax=Azospirillum brasilense RepID=Q8VU46_AZOBR
          Length = 160

 Score =  162 bits (410), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 17  LALVVSGAVWAANGVDFSQSPEVSGTQ-EGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQ 75
           ++ V +    A   V     P       +   +   +  +   NY +QPP+IPH++  YQ
Sbjct: 20  VSGVFAADGAAPAKVPSGPHPITQEIPADPMAKEITDDHKRARNYADQPPLIPHAIRDYQ 79

Query: 76  VTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAP 135
           +  N N+C+ CH  ++   + AP IS THF D DG+    V+PRRYFC QCHVPQ D  P
Sbjct: 80  IDLNINKCMTCHDRKNTEGSQAPMISVTHFQDRDGQTLGAVSPRRYFCTQCHVPQTDAQP 139

Query: 136 IVGNTFT 142
           I GN F 
Sbjct: 140 ITGNRFR 146


>UniRef50_A5EZY0 Periplasmic nitrate reductase, cytochrome c-type protein n=67
           Tax=Gammaproteobacteria RepID=A5EZY0_VIBC3
          Length = 171

 Score =  162 bits (410), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 10/148 (6%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANG-------VDFSQSPEVSGTQ--EGAIRMPKEQDRM 56
           +KK L    ++  ++   A    N             + E+  T+  +   + P+EQ  +
Sbjct: 21  MKKQLIALLSVFTVLAGIAHAELNNPGGIGGLESLRGATEIEATRAADPMKKYPREQA-L 79

Query: 57  PLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
             ++V QPP+IPH++  Y+V+ N N+CL CH  ++ +  GA +IS THF++ +  V ++V
Sbjct: 80  ESDFVYQPPLIPHNIRNYEVSLNANKCLACHSWKNAKEMGATKISVTHFVNREDAVLSDV 139

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFTPS 144
           +PRRYFCLQCHV QAD  P+V N F   
Sbjct: 140 SPRRYFCLQCHVLQADAKPLVENDFERV 167


>UniRef50_Q56351 Diheme cytochrome c napB n=2 Tax=Paracoccus RepID=NAPB_PARPN
          Length = 161

 Score =  162 bits (409), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 76/147 (51%), Gaps = 11/147 (7%)

Query: 7   KKALCQWTAMLALVVSGAVWAAN-----------GVDFSQSPEVSGTQEGAIRMPKEQDR 55
              L +  AM  L++   V AA             +D     +V G      R   +  R
Sbjct: 6   PSRLIRPAAMAGLLLFALVGAALPQAEPAVQIVPALDRLGRADVRGQIPPLGRPITDDVR 65

Query: 56  MPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAE 115
              NY  QPP+IPHS++GYQ+T NTNRC+ CH  +    +GAP IS THF D DG+V  +
Sbjct: 66  RMRNYPEQPPVIPHSIDGYQLTVNTNRCMDCHKPQFTEGSGAPMISVTHFQDRDGQVLTD 125

Query: 116 VAPRRYFCLQCHVPQADTAPIVGNTFT 142
           V PRRYFC  CHV Q D  P+V N F 
Sbjct: 126 VTPRRYFCTACHVQQTDVQPLVPNQFR 152


>UniRef50_B3R8B3 Nitrate reductase (NAP)small subunit, Diheme cytochrome c napB n=4
           Tax=Proteobacteria RepID=B3R8B3_CUPTR
          Length = 175

 Score =  161 bits (407), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 51/106 (48%), Positives = 63/106 (59%), Gaps = 2/106 (1%)

Query: 38  EVSGTQEGAIRMPKEQD--RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTT 95
            +    +  I  P E    R   NY  QPP IPH ++GYQ+  + NRC+ CH       T
Sbjct: 46  PIGNESKAPIMYPTENKDIRRNRNYTMQPPTIPHKIDGYQLDKDFNRCMFCHARTRTEET 105

Query: 96  GAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
            A  +S TH+MD D  V AEV+PRRYFC QCHVPQAD  P+VGN+F
Sbjct: 106 QAIPVSITHYMDRDNNVLAEVSPRRYFCTQCHVPQADAKPLVGNSF 151


>UniRef50_A6Q601 Periplasmic nitrate reductase, small subunit n=1 Tax=Nitratiruptor
           sp. SB155-2 RepID=A6Q601_NITSB
          Length = 193

 Score =  157 bits (398), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 32/171 (18%)

Query: 8   KALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQ------EGAIRMPKEQDRMPLNYV 61
           K L   +A +A+ ++    AA+    S+     G++      E +   P    R   +Y 
Sbjct: 4   KKLVGVSAAVAIFLAAGCGAASQKVVSEHELSYGSKGVPPKVEYSKAAPGTSQRFQRSYE 63

Query: 62  NQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVG------- 113
           N PPMIPHS++G   +T N N CL CH     ++ GA  + PTHF D   K         
Sbjct: 64  NAPPMIPHSIDGLVPITLNNNACLGCHMPNVAKSMGATPLPPTHFKDFFFKTKEKLIKQK 123

Query: 114 ------------------AEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
                             A++AP+RY C+QCH PQA+  P+V NTF P   
Sbjct: 124 LYEDVKAYKQRLSLMAKKADIAPQRYNCVQCHAPQANAKPLVANTFKPDFR 174


>UniRef50_A4WXI9 Periplasmic nitrate reductase subunit NapB n=3 Tax=Rhodobacteraceae
           RepID=A4WXI9_RHOS5
          Length = 148

 Score =  157 bits (397), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/136 (38%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 11  CQWTAMLALVVSGAVWAANGVDFSQS-PEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPH 69
               A LA   S    AA       + P+V  T        K+  R   NY  QPP++PH
Sbjct: 14  VALVAGLAFAQSQVGTAAAVESLRGADPDVDVTTAPVFHQNKQ--RFVRNYRLQPPLVPH 71

Query: 70  SVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVP 129
           S++ YQ+    N CL CH        GAP +S TH+ D DG     VA RR+FC QCHVP
Sbjct: 72  SIDKYQIDMKANECLACHEWRKSGERGAPTLSMTHYQDRDGLQTDTVASRRWFCSQCHVP 131

Query: 130 QADTAPIVGNTFTPSK 145
           QAD   +V N F  S 
Sbjct: 132 QADAPALVENLFQSSG 147


>UniRef50_D1B0Z1 Nitrate reductase cytochrome c-type subunit (NapB) n=3
           Tax=Campylobacterales RepID=D1B0Z1_SULD5
          Length = 173

 Score =  152 bits (384), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 13/154 (8%)

Query: 6   LKKALCQWTAMLALVVSGAVWA----------ANGVDF-SQSPEVSGTQEGAIRMPKEQD 54
           + +      ++L ++V+    A             VD  S+   V+ +   +     E  
Sbjct: 1   MSRKTLILVSLLGVLVASGCAASQSYTEEELGLRKVDLYSEKTVVAESTAYSTVAAGESK 60

Query: 55  RMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD-SDGKV 112
                + N PPMIPH VEG  +++   N C+ CH  E      A  I  +HF D    K+
Sbjct: 61  VYERAFENAPPMIPHDVEGMLEISKENNACIGCHLPEVAEAVKATPIPKSHFYDMRTKKM 120

Query: 113 GAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
             E++  R+ C  CH PQ++  P+V N F+P   
Sbjct: 121 LGELSQARFNCNACHAPQSNNQPLVKNEFSPEYR 154


>UniRef50_A1K382 Probable diheme cytochrome C n=1 Tax=Azoarcus sp. BH72
           RepID=A1K382_AZOSB
          Length = 155

 Score =  151 bits (382), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 1/107 (0%)

Query: 36  SPEVSGTQEGAIRMPKEQD-RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRT 94
           +P +       ++ P   D R    Y  QPP+IPH +EGYQ+  N NRC+ CH       
Sbjct: 29  TPLMEERTPPPLQNPDNSDVRRQRAYAMQPPIIPHKIEGYQLDRNVNRCMMCHARTRTEQ 88

Query: 95  TGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
           + AP IS +HF D DG   AE++PRRYFCLQCHVPQ    PIV N F
Sbjct: 89  SQAPMISVSHFTDRDGNFLAELSPRRYFCLQCHVPQVPVNPIVENRF 135


>UniRef50_Q53177 Diheme cytochrome c napB n=5 Tax=Alphaproteobacteria
           RepID=NAPB_RHOS4
          Length = 154

 Score =  151 bits (382), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 48/109 (44%), Positives = 64/109 (58%)

Query: 34  SQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYR 93
           +  P              +  R+  NY  QPP+IPHS+EGYQ++ N NRCL+CH  +   
Sbjct: 33  ADRPMSEVAAPPLPETITDDRRVGRNYPEQPPVIPHSIEGYQLSVNANRCLECHRRQYSG 92

Query: 94  TTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFT 142
              AP IS THF D +G++ A+V+PRRYFC  CHVPQ +  P+V N F 
Sbjct: 93  LVAAPMISITHFQDREGQMLADVSPRRYFCTACHVPQTNAQPLVTNEFR 141


>UniRef50_B6R9T8 Periplasmic nitrate reductase, diheme cytochrome c subunit n=1
           Tax=Pseudovibrio sp. JE062 RepID=B6R9T8_9RHOB
          Length = 135

 Score =  150 bits (380), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 3/135 (2%)

Query: 16  MLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMP---KEQDRMPLNYVNQPPMIPHSVE 72
           M  L ++G        +  +S       E     P    +  R+   +  QPP++PH  E
Sbjct: 1   MAVLNLTGFAALNAHAEGVKSLRGVQVDEPVFVEPIARPQNTRVNREFRQQPPLVPHKTE 60

Query: 73  GYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
            YQV    N+CL CH   +     AP +S TH+ D +G+   +VA  R+FC QCHVPQ +
Sbjct: 61  AYQVDLKVNQCLTCHDWANAGEKKAPTLSMTHYADREGRQLDQVAGTRWFCTQCHVPQVE 120

Query: 133 TAPIVGNTFTPSKGY 147
             P+V N FTPS   
Sbjct: 121 AEPLVENEFTPSSKR 135


>UniRef50_C1D9G6 Nitrate reductase n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D9G6_LARHH
          Length = 146

 Score =  150 bits (379), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 63/120 (52%)

Query: 27  AANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQC 86
           AA+         +  +     +  K+  R+  +YV QPP+IPH V  Y+++TN N+C+ C
Sbjct: 26  AADNAPLEGQAALGHSATDMYKPIKDSKRIVRDYVQQPPLIPHDVSKYEISTNFNKCMDC 85

Query: 87  HGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           H    Y      R+ P+HF    G+  + ++P RYFC QCHVPQ D  P+V N +  S  
Sbjct: 86  HSAARYVEMNTTRVPPSHFKTRTGQELSNLSPSRYFCTQCHVPQVDARPLVNNAYQSSTR 145


>UniRef50_Q13I14 Periplasmic nitrate reductase subunit NapB n=2 Tax=Burkholderia
           RepID=Q13I14_BURXL
          Length = 159

 Score =  149 bits (377), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 2/139 (1%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQD--RMPLNYVNQ 63
           +  A+    A+ A                    +    +  +  P +         Y  Q
Sbjct: 5   IVLAVISMIALTASAQPTVPAEPFHDTLRGLTPLDEEAKPPLIAPVDNRDVIRARAYAQQ 64

Query: 64  PPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFC 123
           PP IPH ++GYQ+  N NRCL CH       +GA  ++ +H+ D  G+    ++PRRYFC
Sbjct: 65  PPTIPHKIDGYQLDRNANRCLACHARSRAAESGAVPVAVSHYTDRTGETLEHISPRRYFC 124

Query: 124 LQCHVPQADTAPIVGNTFT 142
            QCHV QAD  P+V NTFT
Sbjct: 125 TQCHVTQADAKPLVANTFT 143


>UniRef50_D0U4E1 Periplasmic nitrate reductase subunit NapB n=1 Tax=uncultured SUP05
           cluster bacterium RepID=D0U4E1_9GAMM
          Length = 181

 Score =  149 bits (376), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 41  GTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRI 100
                  +  K+ D    ++++QPP+IPH  +G ++T   N+CL CH  E++R   A ++
Sbjct: 77  SLMPPVGKWIKDAD-FTRSFIDQPPLIPHKTKGMRITMKKNKCLSCHSNENWRDADAVKM 135

Query: 101 SPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFT 142
           + +HFM    K   EV+PRRYFC QCHVPQ D  P++G+ + 
Sbjct: 136 TASHFMTRSNKRLKEVSPRRYFCTQCHVPQVDNKPLIGSDYV 177


>UniRef50_A6VQY4 Nitrate reductase cytochrome c-type subunit (NapB) n=13
           Tax=Pasteurellaceae RepID=A6VQY4_ACTSZ
          Length = 143

 Score =  149 bits (376), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPP 65
           + +             + A   ++ +   Q PE            K+   +P  + +QPP
Sbjct: 1   MMRKYLALILTALAGFAVAETPSSNLTMEQMPE--NVAPAYTNPQKDVGNIPTTFPHQPP 58

Query: 66  MIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQ 125
           ++PHS+ G QVT N N+CL CH  E   TTGAPR+  +HF+D DGK     +PRRYFCLQ
Sbjct: 59  LVPHSIRGLQVTKNANQCLGCHSPEVSPTTGAPRVPESHFLDRDGKRTEGTSPRRYFCLQ 118

Query: 126 CHVPQADTAPIVGNTF-TPSKGYGK 149
           CHV Q D  PIV N F T  K  GK
Sbjct: 119 CHVQQTDVNPIVQNKFETIRKTQGK 143


>UniRef50_Q02IZ3 Cytochrome c-type protein NapB n=10 Tax=Pseudomonas
           RepID=Q02IZ3_PSEAB
          Length = 163

 Score =  149 bits (375), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 39  VSGTQEGAIRMPKEQD--RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTG 96
           ++ ++       +E    +   NY  QPP IPHS+ GY++  ++N+CL CH   +   T 
Sbjct: 41  LAESRPAPPLAAEENKDLKRERNYPEQPPTIPHSIVGYRIDKDSNKCLSCHSRANSARTQ 100

Query: 97  APRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFT 142
           A  IS TH+MD DG+  A V+PRRYFC+QCHVPQ D  P+V N F 
Sbjct: 101 AVMISITHYMDRDGQPLAAVSPRRYFCVQCHVPQQDVKPLVDNRFE 146


>UniRef50_A9I7N5 Periplasmic nitrate reductase, cytochrome c-type protein n=1
           Tax=Bordetella petrii DSM 12804 RepID=A9I7N5_BORPD
          Length = 151

 Score =  148 bits (373), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/93 (46%), Positives = 59/93 (63%)

Query: 54  DRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVG 113
             +P ++V QPP++PH+   Y VT   N+CL CH     + T +P+IS THF D+ G+  
Sbjct: 57  ATLPRDFVQQPPLVPHASSNYPVTLKFNKCLDCHAWARAQATNSPKISITHFRDAQGREL 116

Query: 114 AEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           + V+P RYFC QCHV Q+D  P+V NTF   KG
Sbjct: 117 SSVSPSRYFCQQCHVTQSDAKPLVENTFQRVKG 149


>UniRef50_B9KCP9 Periplasmic nitrate reductase, small subunit, cytochrome c-type
           protein n=3 Tax=Campylobacterales RepID=B9KCP9_CAMLR
          Length = 172

 Score =  146 bits (369), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPH 69
           L     +    V                      + +  M  E   +  ++ N PP+IPH
Sbjct: 14  LISACGLAVKSVDSKDIGLRKTSLESENVELLDAKYSQAMAGESVLIERSFENAPPLIPH 73

Query: 70  SVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--SDGKVGAEVAPRRYFCLQC 126
           ++E    +T + N CL CH     +  GA  +  +H+ D   +      ++  R+ C QC
Sbjct: 74  TLEDMLPITKDNNICLSCHDQSVAKDVGATPLPKSHYYDFRKNKSTKDMISDARFNCTQC 133

Query: 127 HVPQADTAPIVGNTFT 142
           HVPQ+D  P+VGN+F 
Sbjct: 134 HVPQSDAKPLVGNSFE 149


>UniRef50_C7RM81 Nitrate reductase cytochrome c-type subunit (NapB) n=1
           Tax=Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1 RepID=C7RM81_9PROT
          Length = 155

 Score =  144 bits (363), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 14  TAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEG 73
            A LAL   GA  +  G D +   +    +  + + P  +  +   +  QPP+IPH+VE 
Sbjct: 16  LASLALAADGA-NSMRGSDVAAPDQAPEVKTYSGKRPGTEAPVARTFSTQPPVIPHAVEN 74

Query: 74  Y-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
           + ++    N+CL CH   +Y+   AP+I  +HF+D +GK  AE    RY C+QCHVPQ D
Sbjct: 75  FDEINLEGNQCLDCHSAATYQKKKAPKIGDSHFLDREGKKHAEATGGRYNCVQCHVPQVD 134

Query: 133 TAPIVGNTFT 142
             P+V NTF 
Sbjct: 135 APPLVDNTFK 144


>UniRef50_B2V811 Nitrate reductase cytochrome c-type subunit (NapB) n=2
           Tax=Hydrogenothermaceae RepID=B2V811_SULSY
          Length = 216

 Score =  142 bits (359), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 55/126 (43%), Gaps = 2/126 (1%)

Query: 23  GAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTN 81
           G   A    + +  P +   +      P    +    Y N PP IPHS EG   +T   N
Sbjct: 47  GIRQAPVEEEDTAPPAIIDPEYAPKPPPGTSKKYKRAYENAPPQIPHSTEGLLPITKENN 106

Query: 82  RCLQCHGVESYRTTGAPRISPTHFMD-SDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNT 140
            CL CH  E  +   A  I PTHF++   G+    +   RY C QCH PQ D  P+V NT
Sbjct: 107 ACLGCHMPEVAKAVKATPIPPTHFINFRTGQKLNHLYQGRYNCTQCHAPQLDVQPVVKNT 166

Query: 141 FTPSKG 146
           F P   
Sbjct: 167 FKPDYR 172


>UniRef50_Q4HRN5 NapB periplasmic nitrate reductase n=2 Tax=Campylobacter
           RepID=Q4HRN5_CAMUP
          Length = 173

 Score =  141 bits (356), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANGVDFSQ--SPEVSGTQEGAIRM---------PKEQD 54
           +K  +   +A  AL +  +    NGV   Q    + +   E ++ +           E  
Sbjct: 1   MKNKIFLVSAAAALFL-VSCAVNNGVSSEQIGLRKANLNNENSVVLSDINYSGLGAGESA 59

Query: 55  RMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--SDGK 111
            +  ++ N PP+IPH+++G   +T  +N CL CH     +  GA     +H+ D   +  
Sbjct: 60  LLERSFENAPPLIPHNLDGMLPITKESNSCLTCHDKAIAQDVGAIAAPASHYYDFWKNKP 119

Query: 112 VGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
            G  ++  RY C QCHV Q+D  P+VGNTF     
Sbjct: 120 TGDVISEIRYNCTQCHVAQSDAKPLVGNTFKAEFK 154


>UniRef50_Q2W3T4 Nitrate reductase cytochrome c-type subunit n=5 Tax=Proteobacteria
           RepID=Q2W3T4_MAGSA
          Length = 151

 Score =  140 bits (354), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 51/93 (54%)

Query: 52  EQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGK 111
           E  +    Y  QPP++PH+ + Y++    N+CL+CH         AP+IS  H++D +G 
Sbjct: 52  EGSKHERAYRQQPPLVPHTTDKYEIDLKVNQCLRCHEWPYSDQEKAPKISDLHYLDRNGV 111

Query: 112 VGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
               V   RYFC QCHVPQ D  P+V N F  +
Sbjct: 112 RQDVVNGNRYFCKQCHVPQNDAKPLVNNKFQAA 144


>UniRef50_B9L8L1 Periplasmic nitrate reductase, diahem cytochrome C subunit n=2
           Tax=Nautiliaceae RepID=B9L8L1_NAUPA
          Length = 157

 Score =  140 bits (353), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 5/129 (3%)

Query: 21  VSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTN 79
           V+G   A    D    PE+       I  P +  + P ++V  PPMIPHSVEG   +T N
Sbjct: 31  VTGIREANLNADSQNLPELKLNTTQPI--PGKVKKQPASFVTAPPMIPHSVEGMVPITKN 88

Query: 80  TNRCLQCHGVESYRTTGAPRISPTHFMD--SDGKVGAEVAPRRYFCLQCHVPQADTAPIV 137
            N CL CH  ++ ++ G   I P+HF+D    GK  +++A  RY C  CH PQA   P++
Sbjct: 89  NNMCLNCHMPQAAKSLGVTPIPPSHFVDNFEGGKKSSKLAGSRYNCTLCHAPQAMVDPVI 148

Query: 138 GNTFTPSKG 146
            N F   + 
Sbjct: 149 ENKFESLRK 157


>UniRef50_A0RQ33 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=2
           Tax=Campylobacter RepID=A0RQ33_CAMFF
          Length = 177

 Score =  137 bits (346), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 4/124 (3%)

Query: 28  ANGVDFSQSPEVSGTQ-EGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQ 85
              VD +    V+    +     P        ++ N PP+I HS++G   +T  +N CL 
Sbjct: 37  LRNVDLNDENNVANPDIKWLGDAPGTNKTFDRSFENAPPLISHSLDGLVPITIESNSCLS 96

Query: 86  CHGVESYRTTGAPRISPTHF--MDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTP 143
           CH  E  +  G   +  +H   + +   +  +V+  R+ C QCHVPQAD  P+  N F  
Sbjct: 97  CHVPEVAKDAGTIPVPKSHLVVLRTGKDLNGQVSDERFNCTQCHVPQADVKPLKKNNFKA 156

Query: 144 SKGY 147
              Y
Sbjct: 157 DFRY 160


>UniRef50_A7BM57 Periplasmic nitrate reductase beta subunit n=1 Tax=Beggiatoa sp. SS
           RepID=A7BM57_9GAMM
          Length = 140

 Score =  137 bits (344), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 38  EVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGA 97
           E+S   E   R+P +       Y  Q P+IPH +EGY++T   N+CL CH          
Sbjct: 42  ELSAITEW-KRVPSDFQTFLPAYEQQAPLIPHFIEGYKITLEGNKCLTCHKKT------- 93

Query: 98  PRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
             +SPTH  D +GKV   V  R YFC  CHV Q D  P++ NTF  +
Sbjct: 94  --LSPTHLKDRNGKVLDTVDNRLYFCTLCHVSQVDAQPLIDNTFESA 138


>UniRef50_C5EY43 NapB periplasmic nitrate reductase n=2 Tax=Helicobacter
           RepID=C5EY43_9HELI
          Length = 174

 Score =  137 bits (344), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 14/153 (9%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSPEVSGT----------QEGAIRMPKEQDRMPLN 59
           L    + LAL++  +  +       +      T           +   +   E   +  +
Sbjct: 7   LVAGVSTLALIL-VSCKSIQSYSSEEIGLRKTTLFNEEAEIKAYDYTGKTAGESTLIERS 65

Query: 60  YVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--SDGKVGAEV 116
           + N PPMI H+++G   +T + N C  CH  E      A  +  +HF +   +  +  ++
Sbjct: 66  FENAPPMISHNLDGMLPITRDNNACTSCHLPEIAEAVAATPMPKSHFYNFRENKNLDGQM 125

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
              R+ C+ CH  Q D  P+VGN F       +
Sbjct: 126 DENRFNCVICHTTQVDAPPLVGNNFKADFRQEE 158


>UniRef50_A1RG48 Periplasmic nitrate reductase subunit NapB n=20 Tax=Shewanella
           RepID=A1RG48_SHESW
          Length = 143

 Score =  135 bits (339), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 18/143 (12%)

Query: 13  WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIR------------MPKEQDRMPLNY 60
              + A+VV+         D + +P    +  G                P     +  ++
Sbjct: 4   ILTLAAIVVAIGGCTGQKADTNSAPVTINSLAGTSAITDIRPADAMPVFPTRGAALERSF 63

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
            +QPP+IPH  + Y++T + N CL CH  E      A  ++ +H +D  G +  +     
Sbjct: 64  SDQPPLIPHK-DDYKITLDKNGCLSCHSWEKAERMKATPVAKSHVIDDKGNLNGQ----N 118

Query: 121 YFCLQCHVPQADTA-PIVGNTFT 142
           YFC QCHV QA+   P+V N F+
Sbjct: 119 YFCTQCHVAQAENKAPLVENKFS 141


>UniRef50_A7BUA2 Periplasmic nitrate reductase small subunit n=1 Tax=Beggiatoa sp.
           PS RepID=A7BUA2_9GAMM
          Length = 141

 Score =  134 bits (336), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 9/118 (7%)

Query: 28  ANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQ-C 86
           A+  D    PE +       + P E +  PLNY  Q  +IPH +EG ++   +N+C+  C
Sbjct: 30  ASLRDGISIPETNAAVPWN-KFPVEPESFPLNYEEQAALIPHLIEGQRIDLESNQCMDSC 88

Query: 87  HGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
           H +         + S +H+ D DG +  E+  RRY C  CH+PQ D  P+  N F   
Sbjct: 89  HTI-------LKKPSASHYEDRDGNILDEIDSRRYICTSCHLPQTDAQPLRENLFESV 139


>UniRef50_B9D0H5 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=2
           Tax=Campylobacter RepID=B9D0H5_WOLRE
          Length = 227

 Score =  132 bits (332), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 30  GVDFSQSPEVSGTQ-EGAIRMPKEQDRMPLNYVNQPPMIPHSVEG-YQVTTNTNRCLQCH 87
             D     EV        +    E  R    + N PPMIPH +EG   +TT+ N C+ CH
Sbjct: 88  ASDVLDEDEVKLIDINWTLPAAGEAQRYERAFENAPPMIPHDLEGLMPITTDNNMCISCH 147

Query: 88  GVESYRTTGAPRISPTHFMD--SDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSK 145
             E     GA  I  +H          G +++  R+ C  CH PQA+  P   N F P  
Sbjct: 148 MPEVAEGIGATSIPKSHLYSIRFSEDKGGQLSQDRFVCTVCHAPQANIEPKFKNNFVPEY 207

Query: 146 G 146
            
Sbjct: 208 R 208


>UniRef50_A8UYP3 Periplasmic nitrate reductase small subunit (Cytochrome C-type
           protein) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1
           RepID=A8UYP3_9AQUI
          Length = 180

 Score =  132 bits (331), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 14/158 (8%)

Query: 3   SHDLKKALCQWTAMLALVVSGAVWAANGVDF--------SQSPEVSGTQEGAIRMPKEQD 54
           S  L  A    + +   V      A +  +          + P      E     P    
Sbjct: 4   SKGLVLASVGASVLFLGVAQAVKEAISEEELGYRNQTLYDEKPVAPPKVEFIKTPPGSGK 63

Query: 55  RMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTH-----FMDS 108
           +    Y N PP IPHSVEG   +    N CL CH  +  ++ GA  I  TH     F   
Sbjct: 64  KFARAYENAPPQIPHSVEGLIPIKPGQNACLGCHMPDVAKSVGATPIPKTHIALDLFTKG 123

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
             K   ++ P RY C+ CH  QAD  P+V N F P   
Sbjct: 124 GKKKELKIDPARYQCVMCHAAQADAPPLVKNVFKPEFR 161


>UniRef50_A7GZP2 Periplasmic nitrate reductase, diheme cytochrome c subunit n=15
           Tax=Campylobacter RepID=A7GZP2_CAMC5
          Length = 175

 Score =  130 bits (327), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 38  EVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTG 96
           +++ T+E A        R   ++ N PP IPH  EG   +T + N C+ CH  E  + +G
Sbjct: 48  DINYTKEPA----GMAKRFDRSFENAPPFIPHDTEGLVPITKDLNMCVTCHMPEFAKDSG 103

Query: 97  APRISPTHFMD-SDGKVG-AEVAPRRYFCLQCHV-PQADTAPIVGNTFTPSKG 146
           A  I  +H  D  + K    ++   RY C  CHV  Q+    +VGN F P   
Sbjct: 104 ATPIPASHLYDIRNKKDLAGQLDDERYVCTTCHVEQQSGITQLVGNKFKPEFR 156


>UniRef50_A8ERQ6 Periplasmic nitrate reductase, small subunit, cytochrome c-type
           protein NapB n=1 Tax=Arcobacter butzleri RM4018
           RepID=A8ERQ6_ARCB4
          Length = 201

 Score =  127 bits (319), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 64/184 (34%), Gaps = 36/184 (19%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDF--------SQSPEVSGTQEGAIRMPKE 52
           MK H L   +    +        A                 S+   VS   +        
Sbjct: 1   MKLHKLTLVVIAIASFFISSAFAADSKIKDSTLGLRHTNLLSEEKTVSDETKYGTDAAGT 60

Query: 53  QDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHF------ 105
             ++   + N PPMIPH VEG   +  N N+C  CH      + GA  I  +HF      
Sbjct: 61  STKIKRAFENAPPMIPHDVEGMLPIEINNNQCTACHDPLVAESMGATPIPKSHFTSFREE 120

Query: 106 --MDSDGKV-------------------GAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
             +DS+G +                      ++  R+ C  CH PQ+++A +  N F+P 
Sbjct: 121 VKLDSNGNLEREGKVVENSSDLKGVKKPLDHLSNARFNCSACHAPQSNSANVPKNNFSPE 180

Query: 145 KGYG 148
              G
Sbjct: 181 FRSG 184


>UniRef50_A6Q703 Periplasmic nitrate reductase, small subunit n=2
           Tax=Epsilonproteobacteria RepID=A6Q703_SULNB
          Length = 322

 Score =  125 bits (313), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 52/132 (39%), Gaps = 35/132 (26%)

Query: 49  MPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD 107
            P    +    YVN PPMIPHSVEG   +T + N+CL CH  +  +  GA  I P+HF +
Sbjct: 171 APGTAPKFERAYVNAPPMIPHSVEGLLPITKDNNQCLGCHMPDVAKGVGATPIPPSHFTN 230

Query: 108 -------SDG---------------------------KVGAEVAPRRYFCLQCHVPQADT 133
                   +G                           K    +   R+ C QCH PQA+ 
Sbjct: 231 YRPTTVYKNGELVKEGKKVGIQKGDMGNVGDIKLAKVKKLNHLYQGRFNCSQCHAPQANV 290

Query: 134 APIVGNTFTPSK 145
              V NTF    
Sbjct: 291 KTAVANTFKSDG 302


>UniRef50_Q30QD7 Periplasmic nitrate reductase subunit NapB n=2
           Tax=Campylobacterales RepID=Q30QD7_SULDN
          Length = 236

 Score =  122 bits (305), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 49/129 (37%), Gaps = 23/129 (17%)

Query: 39  VSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGA 97
           V+   E          ++   + + PPMIPH   G   + +  NRC+ CH  E     GA
Sbjct: 57  VASKTEYRSAQATTSTKIKRAFQDAPPMIPHDTVGMLPIKSEDNRCVTCHMPEIAGAMGA 116

Query: 98  PRISPTHFMDSDGK----------------------VGAEVAPRRYFCLQCHVPQADTAP 135
             I  +HF D   +                        +++   R+ C QCH PQ+    
Sbjct: 117 TPIPVSHFTDFRPRAKLVNNEVVIATDTYKNETQIVKKSDLQNARFNCNQCHAPQSQGNL 176

Query: 136 IVGNTFTPS 144
           +V NTF P 
Sbjct: 177 LVENTFEPV 185


>UniRef50_A4N8U4 Diheme cytochrome C NapB n=3 Tax=Haemophilus influenzae
          RepID=A4N8U4_HAEIN
          Length = 106

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 3  SHDLKKALCQ-WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYV 61
          +  + K L   +TA+ A  +  +   A G D +Q+ E           P++ +   LNYV
Sbjct: 2  TKQVSKILAGLFTALFAGSLMASDAPAVGKDLTQAAE--NIPPAFHNAPRQGELPALNYV 59

Query: 62 NQPPMIPHSVEGYQVTTN 79
          NQPPM+PHSV  YQVT  
Sbjct: 60 NQPPMVPHSVANYQVTKK 77


>UniRef50_A9FEA0 Diheme cytochrome C n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=A9FEA0_SORC5
          Length = 257

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 43/140 (30%), Gaps = 29/140 (20%)

Query: 18  ALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVT 77
           A +  GA       D      V  + E       E+      Y   PP IPH +E     
Sbjct: 64  AGMYEGAFARLEAADADLYAPVEQS-EADREAALERRASRRAYDGAPPTIPHRIEQ---- 118

Query: 78  TNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRY-FCLQCHVPQADTAPI 136
                CL CH     R         +H              RRY  C QCHV  AD  P+
Sbjct: 119 LGAPDCLSCHERGL-RVANLTAPRMSH--------------RRYESCTQCHVVSADPRPL 163

Query: 137 VG------NTFT--PSKGYG 148
                   NTF   PS   G
Sbjct: 164 AETPPPPDNTFAGMPSPRRG 183



 Score = 47.0 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 29/102 (28%), Gaps = 24/102 (23%)

Query: 31  VDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVE 90
            D     E     +          R    Y   PP IPH       T   + C  CH   
Sbjct: 158 ADPRPLAETPPPPDNTFAGMPSPRRGARAYEGAPPTIPHP------TLMRSECASCH--- 208

Query: 91  SYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
                GA  I  TH             P R  C QCH P A+
Sbjct: 209 --GVHGALGIRSTH-------------PYRQSCTQCHAPSAE 235


>UniRef50_A7TBY3 Predicted protein n=2 Tax=cellular organisms RepID=A7TBY3_NEMVE
          Length = 258

 Score = 43.1 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 23/65 (35%)

Query: 64  PPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFC 123
           PP+IPH     Q+    N CL CH       +    I  TH             P R  C
Sbjct: 198 PPVIPH-----QIQMREN-CLSCH----AGPSAPKEIRVTH-------------PERINC 234

Query: 124 LQCHV 128
            QCH 
Sbjct: 235 RQCHA 239



 Score = 42.4 bits (98), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 27/86 (31%), Gaps = 15/86 (17%)

Query: 57  PLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVE-SYRTTGAPRISPTHFMDSDGKVGAE 115
              Y   PP IPH V+  + +     CLQCH          A      H           
Sbjct: 109 NRAYHGAPPSIPHPVKAER-SMGGKTCLQCHENGGFTEKFKAYAPVTPH----------- 156

Query: 116 VAPRRYFCLQCHVPQADTAPIVGNTF 141
             P    C QCHV Q   +   G  F
Sbjct: 157 --PEMVNCKQCHVQQQANSLFKGTNF 180


>UniRef50_C8WHW4 Putative uncharacterized protein n=1 Tax=Eggerthella lenta DSM 2243
           RepID=C8WHW4_EGGLE
          Length = 110

 Score = 41.2 bits (95), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 40/131 (30%), Gaps = 26/131 (19%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
           MK H +  AL    A+    V+G    A   D +     +    G               
Sbjct: 1   MKKHMITAALVAVMALGLGTVAGCSQEAPREDVN-----ANVPAG--------------- 40

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCH---GVESYRTTGAPRISPTHFMDSDGKVGAEVA 117
              PP++P S +G         C  CH      +     A  +   H+   D     E+ 
Sbjct: 41  --APPLMPTSHDGRFENLGAAGCYGCHGANDQANPMLADATALPADHYAGGDAGSL-EMD 97

Query: 118 PRRYFCLQCHV 128
           P    C+ CH 
Sbjct: 98  PTHEQCITCHA 108


>UniRef50_A1WWS9 Respiratory nitrite reductase (Cytochrome; ammonia-forming) n=4
           Tax=Proteobacteria RepID=A1WWS9_HALHL
          Length = 536

 Score = 40.4 bits (93), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 3/49 (6%)

Query: 83  CLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP---RRYFCLQCHV 128
           C  CH            +    ++D  GK     +    R   C QCHV
Sbjct: 203 CTNCHDPNDDMRLRITSVPLKAYLDRQGKDWRNKSTQEMRSLVCAQCHV 251


>UniRef50_A8VWV9 Nitrite reductase (Cytochrome; ammonia-forming) n=2 Tax=Bacillus
           selenitireducens MLS10 RepID=A8VWV9_9BACI
          Length = 483

 Score = 40.1 bits (92), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 4/49 (8%)

Query: 83  CLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP---RRYFCLQCHV 128
           C  CH   +     +   S T+ MD  G    E +    R Y C QCHV
Sbjct: 177 CSDCHDPATMELRISRP-SFTNAMDRRGIDVTEASHNDMRSYVCAQCHV 224


>UniRef50_A6TSA2 Nitrite reductase (Cytochrome; ammonia-forming) n=2
           Tax=Alkaliphilus RepID=A6TSA2_ALKMQ
          Length = 425

 Score = 40.1 bits (92), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 3/46 (6%)

Query: 83  CLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHV 128
           C  CH  E             HF D+  ++  E+ P    C QCHV
Sbjct: 175 CYNCHRNEPGERVQVTSP---HFADAVERLDLEIPPGNMACAQCHV 217


>UniRef50_A5GB58 Putative uncharacterized protein n=2 Tax=Geobacter
           RepID=A5GB58_GEOUR
          Length = 595

 Score = 40.1 bits (92), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 18/61 (29%), Gaps = 13/61 (21%)

Query: 82  RCLQCHGVESYRTTGAPRIS----PTHFMDSDGKVG--AEVAPRRYF-------CLQCHV 128
           +C  CH         A +++      HF +           AP  Y        C  CH 
Sbjct: 128 KCFDCHKPAFLGNYEATKVATAVEKAHFYNMTASQLDPDNFAPAMYVSANYQKSCTSCHD 187

Query: 129 P 129
           P
Sbjct: 188 P 188


>UniRef50_A1S9Y6 Putative uncharacterized protein n=3 Tax=Shewanella
           RepID=A1S9Y6_SHEAM
          Length = 680

 Score = 39.3 bits (90), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 55/170 (32%), Gaps = 38/170 (22%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPH 69
           L  WT   A +++    +    DF+ +     T  G   +  + D     Y  +     H
Sbjct: 447 LSAWTG--AGLMASLRVSFTAKDFTGAESDVVTIHGYTDVAAQADGAVTAYERR-----H 499

Query: 70  SVEGYQVT----------TNTN------RCLQCHGV---ESYRTTG---APRISPTHF-- 105
           +V+    T           N N       C+ CH          +G    P +   H+  
Sbjct: 500 NVDSESCTTCHNSEANFHKNGNFAEGGLGCVACHNNGQDRRAGGSGPGFGPMVHSKHWGV 559

Query: 106 ----MDSDGKVGAEVAPR---RYFCLQCHVPQADTAPIVGNTFTPSKGYG 148
               +D+DG   +  A        C+ CH   A     + N F  ++ YG
Sbjct: 560 GSKSVDADGNEVSNAASAIAPETSCVACHADGAMDLNAIPNQFIKARAYG 609


>UniRef50_C7N4I1 Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens
           DSM 20476 RepID=C7N4I1_SLAHD
          Length = 137

 Score = 38.9 bits (89), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 30/133 (22%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
           MK      A+C   A+    V+G   + +G   S    V+GT+     MP +  +     
Sbjct: 1   MKKRAFIIAMCMTLALSFGAVAGCSSSDDGA-ASNPDAVAGTETTPRLMPAQHQKY---- 55

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPT------HFMDSDGKVGA 114
                          +     +C +CHG       G P +S +      H++D+D     
Sbjct: 56  ---------------IDRPAYKCYKCHG---ASEKGNPTVSTSRAMPAGHYVDNDPSSF- 96

Query: 115 EVAPRRYFCLQCH 127
           ++ P R  C  CH
Sbjct: 97  QLDPSREECRTCH 109


>UniRef50_A6Q6U7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q6U7_SULNB
          Length = 370

 Score = 38.5 bits (88), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 78  TNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR-YFCLQCHVPQADT 133
            + + C +CH    Y      + S ++F D   +  A  A ++ Y C  CH+P AD 
Sbjct: 22  MDNHSCKECHE-NIYEEFQGSQHSKSYFNDELHRKIANAADKKKYACATCHMPMADN 77


>UniRef50_D0WFP4 Putative lipoprotein n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WFP4_9ACTN
          Length = 115

 Score = 38.5 bits (88), Expect = 0.072,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 15/118 (12%)

Query: 14  TAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIP-HSVE 72
           TA LA++V+ A+ +A    F      SG                   +  PP+ P    +
Sbjct: 6   TAALAMLVATALCSAALSGFMLVSCGSGGPAAQDDAA----------LKAPPLQPAEDHQ 55

Query: 73  GYQVTTNTNRCLQCHGVESYRTTG---APRISPTHFMDSDGKVGAEVAPRRYFCLQCH 127
           G   +  +  C  CHGV+         AP +   H+   D     ++ P R  C+ CH
Sbjct: 56  GIWESKGSEGCYGCHGVDENGARKVEAAPALPEDHYAAGDISSM-KIDPERDQCIICH 112


>UniRef50_B5EIT6 Putative uncharacterized protein n=4 Tax=Geobacter
           RepID=B5EIT6_GEOBB
          Length = 1294

 Score = 38.1 bits (87), Expect = 0.098,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 8/63 (12%)

Query: 70  SVEGYQVTTNTNRCLQCHGVESYRTT--GAPRISPTHF--MDSDGKVGAEVAPRRYFCLQ 125
           +V  +      N C+ CH   S   +  GA  +   HF  M + G   + V   R  C  
Sbjct: 413 NVANHPFAIGANPCIACHNPHSTAGSAAGATPV---HFNTMTAAGYPASYVT-SRSNCSN 468

Query: 126 CHV 128
           CH 
Sbjct: 469 CHA 471


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P0ABL3 Diheme cytochrome c napB n=142 Tax=Enterobacteri...   215   3e-55
UniRef50_C4K978 Resolvase domain protein n=2 Tax=Rhodocyclaceae ...   192   3e-48
UniRef50_A0L804 Periplasmic nitrate reductase subunit NapB n=1 T...   190   1e-47
UniRef50_A0EJJ6 Nitrate reductase n=1 Tax=uncultured bacterium p...   188   5e-47
UniRef50_P44654 Diheme cytochrome c napB n=21 Tax=Pasteurellacea...   184   7e-46
UniRef50_A1S624 Periplasmic nitrate reductase subunit NapB n=8 T...   184   7e-46
UniRef50_A3D3V4 Periplasmic nitrate reductase subunit NapB n=18 ...   181   5e-45
UniRef50_D0IAV4 Nitrate reductase cytochrome c550-type subunit n...   181   9e-45
UniRef50_Q21PN0 Periplasmic nitrate reductase subunit NapB n=1 T...   180   1e-44
UniRef50_A0KIM4 PeriplasmiC nitrate reductase, diheme cytochrome...   178   4e-44
UniRef50_A5EZY0 Periplasmic nitrate reductase, cytochrome c-type...   178   4e-44
UniRef50_B5ZZF7 Nitrate reductase cytochrome c-type subunit (Nap...   177   8e-44
UniRef50_P39186 Diheme cytochrome c napB n=5 Tax=Burkholderiales...   177   1e-43
UniRef50_Q47A88 Periplasmic nitrate reductase subunit NapB n=1 T...   176   2e-43
UniRef50_D0J756 Nitrate reductase cytochrome c-type subunit n=1 ...   176   2e-43
UniRef50_B6B7Q2 Periplasmic nitrate reductase, diheme cytochrome...   176   2e-43
UniRef50_Q56351 Diheme cytochrome c napB n=2 Tax=Paracoccus RepI...   175   4e-43
UniRef50_Q8VU46 Periplasmic nitrate reductase small diheme cytoc...   173   1e-42
UniRef50_B1Y6A3 Nitrate reductase cytochrome c-type subunit (Nap...   172   3e-42
UniRef50_Q13I14 Periplasmic nitrate reductase subunit NapB n=2 T...   170   2e-41
UniRef50_D1B0Z1 Nitrate reductase cytochrome c-type subunit (Nap...   169   3e-41
UniRef50_B3R8B3 Nitrate reductase (NAP)small subunit, Diheme cyt...   168   5e-41
UniRef50_B6IR11 Diheme cytochrome c napB n=1 Tax=Rhodospirillum ...   167   1e-40
UniRef50_A4WXI9 Periplasmic nitrate reductase subunit NapB n=3 T...   167   1e-40
UniRef50_Q487G5 Periplasmic nitrate reductase, cytochrome c-type...   165   4e-40
UniRef50_A6VQY4 Nitrate reductase cytochrome c-type subunit (Nap...   164   7e-40
UniRef50_B6R9T8 Periplasmic nitrate reductase, diheme cytochrome...   163   1e-39
UniRef50_A6Q601 Periplasmic nitrate reductase, small subunit n=1...   163   1e-39
UniRef50_B9KCP9 Periplasmic nitrate reductase, small subunit, cy...   162   4e-39
UniRef50_C1D9G6 Nitrate reductase n=1 Tax=Laribacter hongkongens...   161   6e-39
UniRef50_B2V811 Nitrate reductase cytochrome c-type subunit (Nap...   160   2e-38
UniRef50_Q53177 Diheme cytochrome c napB n=5 Tax=Alphaproteobact...   159   2e-38
UniRef50_A1K382 Probable diheme cytochrome C n=1 Tax=Azoarcus sp...   157   9e-38
UniRef50_Q4HRN5 NapB periplasmic nitrate reductase n=2 Tax=Campy...   157   1e-37
UniRef50_Q02IZ3 Cytochrome c-type protein NapB n=10 Tax=Pseudomo...   156   2e-37
UniRef50_D0U4E1 Periplasmic nitrate reductase subunit NapB n=1 T...   155   4e-37
UniRef50_A9I7N5 Periplasmic nitrate reductase, cytochrome c-type...   155   4e-37
UniRef50_C7RM81 Nitrate reductase cytochrome c-type subunit (Nap...   154   9e-37
UniRef50_A0RQ33 PeriplasmiC nitrate reductase, diheme cytochrome...   153   2e-36
UniRef50_A8UYP3 Periplasmic nitrate reductase small subunit (Cyt...   152   2e-36
UniRef50_C5EY43 NapB periplasmic nitrate reductase n=2 Tax=Helic...   151   7e-36
UniRef50_A8ERQ6 Periplasmic nitrate reductase, small subunit, cy...   150   1e-35
UniRef50_Q2W3T4 Nitrate reductase cytochrome c-type subunit n=5 ...   149   4e-35
UniRef50_A7BM57 Periplasmic nitrate reductase beta subunit n=1 T...   144   1e-33
UniRef50_A7BUA2 Periplasmic nitrate reductase small subunit n=1 ...   143   2e-33
UniRef50_B9L8L1 Periplasmic nitrate reductase, diahem cytochrome...   142   3e-33
UniRef50_B9D0H5 PeriplasmiC nitrate reductase, diheme cytochrome...   142   3e-33
UniRef50_A7GZP2 Periplasmic nitrate reductase, diheme cytochrome...   140   1e-32
UniRef50_A1RG48 Periplasmic nitrate reductase subunit NapB n=20 ...   139   2e-32
UniRef50_A6Q703 Periplasmic nitrate reductase, small subunit n=2...   137   9e-32
UniRef50_Q30QD7 Periplasmic nitrate reductase subunit NapB n=2 T...   133   2e-30
UniRef50_A9FEA0 Diheme cytochrome C n=1 Tax=Sorangium cellulosum...    90   2e-17
UniRef50_A4N8U4 Diheme cytochrome C NapB n=3 Tax=Haemophilus inf...    69   3e-11

Sequences not found previously or not previously below threshold:

UniRef50_A7TBY3 Predicted protein n=2 Tax=cellular organisms Rep...    48   8e-05
UniRef50_C8WHW4 Putative uncharacterized protein n=1 Tax=Eggerth...    45   0.001
UniRef50_A8VWV9 Nitrite reductase (Cytochrome; ammonia-forming) ...    42   0.006
UniRef50_A5GB58 Putative uncharacterized protein n=2 Tax=Geobact...    42   0.008
UniRef50_A6TSA2 Nitrite reductase (Cytochrome; ammonia-forming) ...    41   0.009
UniRef50_C6MWS8 Putative uncharacterized protein n=1 Tax=Geobact...    40   0.028
UniRef50_C8S748 Putative uncharacterized protein n=1 Tax=Ferrogl...    39   0.049
UniRef50_Q1ITP8 Multiheme cytochrome n=1 Tax=Candidatus Koribact...    39   0.049
UniRef50_B3E658 Putative uncharacterized protein n=1 Tax=Geobact...    39   0.071

>UniRef50_P0ABL3 Diheme cytochrome c napB n=142 Tax=Enterobacteriaceae
           RepID=NAPB_ECOLI
          Length = 149

 Score =  215 bits (548), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
           MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY
Sbjct: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
           VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR
Sbjct: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120

Query: 121 YFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           YFCLQCHVPQADTAPIVGNTFTPSKGYGK
Sbjct: 121 YFCLQCHVPQADTAPIVGNTFTPSKGYGK 149


>UniRef50_C4K978 Resolvase domain protein n=2 Tax=Rhodocyclaceae RepID=C4K978_THASP
          Length = 150

 Score =  192 bits (487), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 82/145 (56%)

Query: 2   KSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYV 61
           ++ +L  AL       A+V   A+  A              Q G  +   +Q  +  +YV
Sbjct: 4   QTRNLVLALVAAVGFGAMVPPAAMAQAVKSIRGADVAEQELQVGNYKPIPDQAPIERDYV 63

Query: 62  NQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRY 121
            QPP+IPH VEGY+VT N N+C+ CH    Y+ +GA ++S THF D DG   + ++PRRY
Sbjct: 64  QQPPLIPHKVEGYEVTINFNKCMDCHAWSRYKESGATKVSLTHFKDRDGGELSNISPRRY 123

Query: 122 FCLQCHVPQADTAPIVGNTFTPSKG 146
           FC+QCHVPQ D  P+VGN F  ++G
Sbjct: 124 FCMQCHVPQTDAKPLVGNKFQRAEG 148


>UniRef50_A0L804 Periplasmic nitrate reductase subunit NapB n=1 Tax=Magnetococcus
           sp. MC-1 RepID=A0L804_MAGSM
          Length = 152

 Score =  190 bits (483), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 5/140 (3%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSPEV-----SGTQEGAIRMPKEQDRMPLNYVNQP 64
           +  W A  AL+   +  +AN         V     + ++    +  ++Q  +  +Y+ QP
Sbjct: 9   VMGWMACFALLGVVSTASANEGGVQSLRGVHGLDSNASEPDFKKWNEDQKPIKRDYLQQP 68

Query: 65  PMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCL 124
           P+IPHSVE Y++    NRCL CH  E+Y+ +GA +IS THF D  G   A+V+P RYFC 
Sbjct: 69  PLIPHSVEQYRINLRQNRCLSCHSWETYKQSGATKISLTHFRDRYGSELADVSPGRYFCT 128

Query: 125 QCHVPQADTAPIVGNTFTPS 144
           QCHVPQ +  P+V NTF P 
Sbjct: 129 QCHVPQRNAQPLVENTFKPV 148


>UniRef50_A0EJJ6 Nitrate reductase n=1 Tax=uncultured bacterium pES01019D12
           RepID=A0EJJ6_9BACT
          Length = 148

 Score =  188 bits (477), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 4   HDLKKALCQWTAMLALVVSGAVWAANGVDFSQ---SPEVSGTQEGAIRMPKEQDRMPLNY 60
            + K+ +    A++ +   G + +   V   +   S E + +   + R   +   +  ++
Sbjct: 1   MNGKRLIVMTLAIIMVAYGGQLLSQENVATMRGVKSIEDTSSAPESKRWEPDSSPLTRDF 60

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
           V QPP+IPHS +GYQ+    N+CL CH   +++  GA +IS THF D DG   + V+  R
Sbjct: 61  VQQPPLIPHSTKGYQINLKFNKCLTCHSWANHKEAGATKISLTHFKDRDGNELSNVSASR 120

Query: 121 YFCLQCHVPQADTAPIVGNTFTPSK 145
           YFC QCHVPQ DTAP+V N F P K
Sbjct: 121 YFCTQCHVPQRDTAPLVENEFEPVK 145


>UniRef50_P44654 Diheme cytochrome c napB n=21 Tax=Pasteurellaceae RepID=NAPB_HAEIN
          Length = 150

 Score =  184 bits (467), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/148 (50%), Positives = 93/148 (62%), Gaps = 3/148 (2%)

Query: 3   SHDLKKALCQ-WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYV 61
           +  + K L   +TA+ A  +  +   A G D +Q+ E           P++ +   LNYV
Sbjct: 5   TKQVSKILAGLFTALFAGSLMASDAPAVGKDLTQAAE--NIPPAFHNAPRQGELPALNYV 62

Query: 62  NQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRY 121
           NQPPM+PHSV  YQVT N N+CL CH  E+ R +GA RISPTHFMD DGKVG+  +PRRY
Sbjct: 63  NQPPMVPHSVANYQVTKNVNQCLNCHSPENSRLSGATRISPTHFMDRDGKVGSSSSPRRY 122

Query: 122 FCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           FCLQCHV QA+  PIV N F P KGYG 
Sbjct: 123 FCLQCHVSQANVDPIVPNDFKPMKGYGN 150


>UniRef50_A1S624 Periplasmic nitrate reductase subunit NapB n=8 Tax=Proteobacteria
           RepID=A1S624_SHEAM
          Length = 157

 Score =  184 bits (467), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSP-EVSGTQEGAIRMPKEQDRMPLN 59
           MK+     AL    A   L  +  V         Q+P  V  T     ++  +  +   N
Sbjct: 1   MKTMKTLSAL-ALVAFACLANASTVTDEKIATLRQAPLNVEVTPPAMQQVMNKDVKQARN 59

Query: 60  YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPR 119
           Y  QPP+IPH ++GYQ+    N+C+ CH       + AP +S TH+MD D    A+++PR
Sbjct: 60  YPMQPPVIPHKIDGYQLDLKVNKCMSCHARTRTGESQAPMVSVTHYMDRDNNFLADLSPR 119

Query: 120 RYFCLQCHVPQADTAPIVGNTF 141
           RYFC+QCHVPQ D  P+V N F
Sbjct: 120 RYFCVQCHVPQLDAKPLVDNEF 141


>UniRef50_A3D3V4 Periplasmic nitrate reductase subunit NapB n=18 Tax=Proteobacteria
           RepID=A3D3V4_SHEB5
          Length = 161

 Score =  181 bits (460), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 6/149 (4%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANG----VDFSQSP-EVSGTQEGAIRMPKEQDR 55
           MK+  L  A     A  +L+++    A+          Q+P +V  T      +     +
Sbjct: 1   MKTLQLVSA-IGLLAFGSLMMTAVSAASIPDEKIATMRQAPIDVEPTPPAMQNVRNTDVK 59

Query: 56  MPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAE 115
              +Y  QPP+IPH ++GYQ+    N+C+ CH       + AP +S THFMD D    AE
Sbjct: 60  EVRSYPMQPPVIPHKIDGYQLDLKVNKCMACHARSRIGDSQAPMVSVTHFMDRDNNFLAE 119

Query: 116 VAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
           ++PRRYFC QCHVPQ D   +V N F   
Sbjct: 120 LSPRRYFCTQCHVPQLDAKLLVENDFVDM 148


>UniRef50_D0IAV4 Nitrate reductase cytochrome c550-type subunit n=1 Tax=Grimontia
           hollisae CIP 101886 RepID=D0IAV4_VIBHO
          Length = 150

 Score =  181 bits (458), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 76/150 (50%), Positives = 93/150 (62%), Gaps = 6/150 (4%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANG----VDFSQSPEVSGT--QEGAIRMPKEQDRMPLN 59
           +K  L     +  L+ S  V A            + E+  T    G   +PK QDR  LN
Sbjct: 1   MKNKLTFSLVLAVLLGSATVAAVEEGTGIKSLRGATEIGETNVAPGIKSVPKNQDRFSLN 60

Query: 60  YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPR 119
           YVNQPPMIPH+++GYQV  + N CLQCH V+ YR TGAPR+SPTHFMD D KV  E++PR
Sbjct: 61  YVNQPPMIPHAIDGYQVNQSNNACLQCHDVDVYRKTGAPRVSPTHFMDRDNKVLTEISPR 120

Query: 120 RYFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           RYFCLQCHVPQA T  +V N F P+  +GK
Sbjct: 121 RYFCLQCHVPQAHTDELVENEFVPAGKFGK 150


>UniRef50_Q21PN0 Periplasmic nitrate reductase subunit NapB n=1 Tax=Saccharophagus
           degradans 2-40 RepID=Q21PN0_SACD2
          Length = 172

 Score =  180 bits (456), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 14/156 (8%)

Query: 3   SHDLKKALCQWTAMLALVVSGAVWAAN--GVDFSQSPEVSGTQEGAIRMPKEQD------ 54
           +  L K +     ++AL  + A  A     VD     +V+  ++G     +  D      
Sbjct: 5   TRHLPKLIIATLGIVALSFASAYAAEELMHVDADGKNQVASLRKGTALNNENPDPAPLQD 64

Query: 55  ------RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDS 108
                 R    Y  QPP IPH + GYQ+    N+C+ CH       + AP IS THFMD 
Sbjct: 65  EQNKDLRFNRAYPMQPPPIPHKITGYQIDLKANKCMSCHARTRVEESQAPMISVTHFMDR 124

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
           DG   A+V+ RRYFC QCHVPQ +  P++ NTF   
Sbjct: 125 DGNFLADVSARRYFCTQCHVPQVERDPLIENTFKDV 160


>UniRef50_A0KIM4 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=3
           Tax=Gammaproteobacteria RepID=A0KIM4_AERHH
          Length = 151

 Score =  178 bits (452), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 13/149 (8%)

Query: 7   KKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQ-----------EGAIRMPKEQDR 55
            K L    AMLA +++G++ AA     + +  +   +                  K+ D 
Sbjct: 1   MKKLIG--AMLACLMAGSLMAAVPEITNSTGGIKSERGNTDLVTDADAAPMKNFRKDGDL 58

Query: 56  MPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAE 115
               Y++QPP+IPH    Y+V    N+CL CH  ++     AP+ISPTHF   DG    E
Sbjct: 59  YDRQYMHQPPLIPHDTRNYEVDNKVNKCLACHSFKNASAMKAPKISPTHFETRDGMTLGE 118

Query: 116 VAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
           V+PRRYFCLQCHVPQAD  P+V NTF P 
Sbjct: 119 VSPRRYFCLQCHVPQADAKPLVENTFKPV 147


>UniRef50_A5EZY0 Periplasmic nitrate reductase, cytochrome c-type protein n=67
           Tax=Gammaproteobacteria RepID=A5EZY0_VIBC3
          Length = 171

 Score =  178 bits (452), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 10/148 (6%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANG-------VDFSQSPEVSGTQ--EGAIRMPKEQDRM 56
           +KK L    ++  ++   A    N             + E+  T+  +   + P+EQ  +
Sbjct: 21  MKKQLIALLSVFTVLAGIAHAELNNPGGIGGLESLRGATEIEATRAADPMKKYPREQA-L 79

Query: 57  PLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
             ++V QPP+IPH++  Y+V+ N N+CL CH  ++ +  GA +IS THF++ +  V ++V
Sbjct: 80  ESDFVYQPPLIPHNIRNYEVSLNANKCLACHSWKNAKEMGATKISVTHFVNREDAVLSDV 139

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFTPS 144
           +PRRYFCLQCHV QAD  P+V N F   
Sbjct: 140 SPRRYFCLQCHVLQADAKPLVENDFERV 167


>UniRef50_B5ZZF7 Nitrate reductase cytochrome c-type subunit (NapB) n=7
           Tax=Rhizobiaceae RepID=B5ZZF7_RHILW
          Length = 167

 Score =  177 bits (450), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 12/160 (7%)

Query: 1   MKSHDLKKALCQ---WTAMLA-LVVSGAVWAANGVDFSQSPEVSGTQEGAIRMP------ 50
           M+  D  +   +   WTA+ A L+V     +   V     P++ G  E     P      
Sbjct: 1   MRGQDSPRRRLRRPEWTAIAAGLLVFVTTASIAQVVTQNVPQLQGPPEAMQSAPAAVLPR 60

Query: 51  --KEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDS 108
              +  R    Y +QPP+IPHS+EGY+++ N NRCL CH  E  + +GAP IS TH+M  
Sbjct: 61  WVVDDRRQMRAYPDQPPIIPHSIEGYELSVNANRCLSCHKREFTQDSGAPMISVTHYMTR 120

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYG 148
           DG++ A+V+PRRYFC  CHVPQAD  P+V + F      G
Sbjct: 121 DGQMIADVSPRRYFCTACHVPQADIKPLVPSMFKDMSELG 160


>UniRef50_P39186 Diheme cytochrome c napB n=5 Tax=Burkholderiales RepID=NAPB_RALEH
          Length = 169

 Score =  177 bits (448), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 3/138 (2%)

Query: 10  LCQWTAMLALVVSGAVWAANGVD-FSQSPEVSGTQEGAIRMPKEQD--RMPLNYVNQPPM 66
           L    AM A+       A   VD       ++      +  P E    R   NY  QPP 
Sbjct: 17  LLAALAMQAIFFPAPARAQGLVDAMRGPTAIANEPRAPLLYPTENKDIRRTRNYTMQPPT 76

Query: 67  IPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQC 126
           IPH ++GYQ+  + NRC+ CH       T A  +S TH+MD D  V A+V+PRRYFC QC
Sbjct: 77  IPHKIDGYQLDKDFNRCMFCHARTRTEETQAIPVSITHYMDRDNNVLADVSPRRYFCTQC 136

Query: 127 HVPQADTAPIVGNTFTPS 144
           HVPQADT P++GN F   
Sbjct: 137 HVPQADTKPLIGNNFVDV 154


>UniRef50_Q47A88 Periplasmic nitrate reductase subunit NapB n=1 Tax=Dechloromonas
           aromatica RCB RepID=Q47A88_DECAR
          Length = 146

 Score =  176 bits (446), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 45/110 (40%), Positives = 72/110 (65%)

Query: 40  SGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPR 99
             ++    R  K+++ +P N+  QPP+IPHS++GY +T N N+C+ CH  E    TGA +
Sbjct: 37  GNSKVDMFRPEKDKESIPRNFQKQPPLIPHSIKGYNITQNFNKCMDCHSKERAEETGATK 96

Query: 100 ISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
           ++ +H++D + K    ++PRRYFC+QCHVPQ D  P+V NT+ P+   G+
Sbjct: 97  VAKSHYLDREDKKLTNISPRRYFCMQCHVPQFDAKPLVENTYKPAAKRGE 146


>UniRef50_D0J756 Nitrate reductase cytochrome c-type subunit n=1 Tax=Comamonas
           testosteroni CNB-2 RepID=D0J756_COMTE
          Length = 168

 Score =  176 bits (446), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 8/149 (5%)

Query: 4   HDLKKALCQWTAMLALVVSGAVWAANG------VDFSQSPEVSGTQEGA--IRMPKEQDR 55
            +  + L +   ML ++ +G  W                  +    +         +  R
Sbjct: 1   MNFFRKLVRLVGMLLMLNTGMAWTPAAIAETFYDSARGPTPIMQATKPPVLGNAVNDDVR 60

Query: 56  MPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAE 115
              NY  QPP IPH V+GYQV  N N+C+ CH       + A  +S TH+MD DG++  +
Sbjct: 61  RTRNYTWQPPTIPHRVDGYQVDKNFNKCMDCHSRTKAEISQAVPVSVTHYMDRDGRMLGQ 120

Query: 116 VAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
           V+ RRYFC QCHV Q    P+V NTF   
Sbjct: 121 VSTRRYFCQQCHVAQDAVRPLVSNTFEDV 149


>UniRef50_B6B7Q2 Periplasmic nitrate reductase, diheme cytochrome c subunit n=1
           Tax=Rhodobacterales bacterium Y4I RepID=B6B7Q2_9RHOB
          Length = 156

 Score =  176 bits (445), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 71/146 (48%), Gaps = 7/146 (4%)

Query: 4   HDLKKALCQ---WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
             L+ A+     + A  A   +      NGV   Q  E +        +     R   NY
Sbjct: 2   KHLRLAILAVPVFLATTAFAQTQVSTLRNGVPLEQEGEATQIP----GIVNTDIRQVRNY 57

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
            +QPP+IPH  + YQV  N+N+CL CH   +   + AP IS THFM+ +G+    V+PRR
Sbjct: 58  PDQPPLIPHKTDNYQVDLNSNKCLTCHSRTAVEISQAPMISVTHFMNREGQTLGAVSPRR 117

Query: 121 YFCLQCHVPQADTAPIVGNTFTPSKG 146
           YFC QCHV Q +  P+V N F     
Sbjct: 118 YFCTQCHVVQTNARPLVENEFVDVDK 143


>UniRef50_Q56351 Diheme cytochrome c napB n=2 Tax=Paracoccus RepID=NAPB_PARPN
          Length = 161

 Score =  175 bits (444), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/157 (39%), Positives = 79/157 (50%), Gaps = 12/157 (7%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAAN-----------GVDFSQSPEVSGTQEGAIRM 49
           M+  D    L +  AM  L++   V AA             +D     +V G      R 
Sbjct: 1   MRGQD-PSRLIRPAAMAGLLLFALVGAALPQAEPAVQIVPALDRLGRADVRGQIPPLGRP 59

Query: 50  PKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSD 109
             +  R   NY  QPP+IPHS++GYQ+T NTNRC+ CH  +    +GAP IS THF D D
Sbjct: 60  ITDDVRRMRNYPEQPPVIPHSIDGYQLTVNTNRCMDCHKPQFTEGSGAPMISVTHFQDRD 119

Query: 110 GKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           G+V  +V PRRYFC  CHV Q D  P+V N F     
Sbjct: 120 GQVLTDVTPRRYFCTACHVQQTDVQPLVPNQFRDGYR 156


>UniRef50_Q8VU46 Periplasmic nitrate reductase small diheme cytochrome c subunit n=1
           Tax=Azospirillum brasilense RepID=Q8VU46_AZOBR
          Length = 160

 Score =  173 bits (439), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 17  LALVVSGAVWAANGVDFSQSPEVSGTQ-EGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQ 75
           ++ V +    A   V     P       +   +   +  +   NY +QPP+IPH++  YQ
Sbjct: 20  VSGVFAADGAAPAKVPSGPHPITQEIPADPMAKEITDDHKRARNYADQPPLIPHAIRDYQ 79

Query: 76  VTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAP 135
           +  N N+C+ CH  ++   + AP IS THF D DG+    V+PRRYFC QCHVPQ D  P
Sbjct: 80  IDLNINKCMTCHDRKNTEGSQAPMISVTHFQDRDGQTLGAVSPRRYFCTQCHVPQTDAQP 139

Query: 136 IVGNTFT 142
           I GN F 
Sbjct: 140 ITGNRFR 146


>UniRef50_B1Y6A3 Nitrate reductase cytochrome c-type subunit (NapB) n=1
           Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A3_LEPCP
          Length = 161

 Score =  172 bits (436), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 66/112 (58%)

Query: 35  QSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRT 94
            +P          R  ++      ++V QPP+IPH+  GYQ+T N N+C+ CH  +  + 
Sbjct: 48  GTPLNQDNPPEGARQERDHGPADRDFVQQPPLIPHTTAGYQITKNYNKCMDCHAWQKTKV 107

Query: 95  TGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           +GA ++S THF   +G+    ++PRRYFC QCHVPQ D  P++ NTF  ++G
Sbjct: 108 SGATKVSVTHFRTREGQELDNISPRRYFCTQCHVPQTDARPLIDNTFQRARG 159


>UniRef50_Q13I14 Periplasmic nitrate reductase subunit NapB n=2 Tax=Burkholderia
           RepID=Q13I14_BURXL
          Length = 159

 Score =  170 bits (430), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 2/139 (1%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQD--RMPLNYVNQ 63
           +  A+    A+ A                    +    +  +  P +         Y  Q
Sbjct: 5   IVLAVISMIALTASAQPTVPAEPFHDTLRGLTPLDEEAKPPLIAPVDNRDVIRARAYAQQ 64

Query: 64  PPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFC 123
           PP IPH ++GYQ+  N NRCL CH       +GA  ++ +H+ D  G+    ++PRRYFC
Sbjct: 65  PPTIPHKIDGYQLDRNANRCLACHARSRAAESGAVPVAVSHYTDRTGETLEHISPRRYFC 124

Query: 124 LQCHVPQADTAPIVGNTFT 142
            QCHV QAD  P+V NTFT
Sbjct: 125 TQCHVTQADAKPLVANTFT 143


>UniRef50_D1B0Z1 Nitrate reductase cytochrome c-type subunit (NapB) n=3
           Tax=Campylobacterales RepID=D1B0Z1_SULD5
          Length = 173

 Score =  169 bits (427), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 13/157 (8%)

Query: 6   LKKALCQWTAMLALVVSGAVWA----------ANGVDF-SQSPEVSGTQEGAIRMPKEQD 54
           + +      ++L ++V+    A             VD  S+   V+ +   +     E  
Sbjct: 1   MSRKTLILVSLLGVLVASGCAASQSYTEEELGLRKVDLYSEKTVVAESTAYSTVAAGESK 60

Query: 55  RMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD-SDGKV 112
                + N PPMIPH VEG  +++   N C+ CH  E      A  I  +HF D    K+
Sbjct: 61  VYERAFENAPPMIPHDVEGMLEISKENNACIGCHLPEVAEAVKATPIPKSHFYDMRTKKM 120

Query: 113 GAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
             E++  R+ C  CH PQ++  P+V N F+P     +
Sbjct: 121 LGELSQARFNCNACHAPQSNNQPLVKNEFSPEYRSKE 157


>UniRef50_B3R8B3 Nitrate reductase (NAP)small subunit, Diheme cytochrome c napB n=4
           Tax=Proteobacteria RepID=B3R8B3_CUPTR
          Length = 175

 Score =  168 bits (425), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 2/111 (1%)

Query: 33  FSQSPEVSGTQEGAIRMPKEQD--RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVE 90
              +  +    +  I  P E    R   NY  QPP IPH ++GYQ+  + NRC+ CH   
Sbjct: 41  MRGNTPIGNESKAPIMYPTENKDIRRNRNYTMQPPTIPHKIDGYQLDKDFNRCMFCHART 100

Query: 91  SYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
               T A  +S TH+MD D  V AEV+PRRYFC QCHVPQAD  P+VGN+F
Sbjct: 101 RTEETQAIPVSITHYMDRDNNVLAEVSPRRYFCTQCHVPQADAKPLVGNSF 151


>UniRef50_B6IR11 Diheme cytochrome c napB n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IR11_RHOCS
          Length = 168

 Score =  167 bits (422), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 21  VSGAVWAANGVDFSQSPEVSGTQ----EGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQV 76
            +       G D    P V  T         +   +  R   NY  QPP+IPH++ GYQV
Sbjct: 27  AAQEGTGRAGTDTPFRPPVGFTDEAAAPPLAKEITDDRRRARNYPEQPPVIPHNIVGYQV 86

Query: 77  TTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPI 136
               N+CL CH  +      AP +S +H+   +G+    VAPRRYFC QCHVPQ D  P+
Sbjct: 87  NLQLNQCLTCHSRQYTEQVQAPMVSISHYQTREGQTLGAVAPRRYFCTQCHVPQTDARPV 146

Query: 137 VGNTFTP 143
           V N F P
Sbjct: 147 VENRFRP 153


>UniRef50_A4WXI9 Periplasmic nitrate reductase subunit NapB n=3 Tax=Rhodobacteraceae
           RepID=A4WXI9_RHOS5
          Length = 148

 Score =  167 bits (422), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/137 (38%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 11  CQWTAMLALVVSGAVWAANGVDFSQS-PEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPH 69
               A LA   S    AA       + P+V  T        K+  R   NY  QPP++PH
Sbjct: 14  VALVAGLAFAQSQVGTAAAVESLRGADPDVDVTTAPVFHQNKQ--RFVRNYRLQPPLVPH 71

Query: 70  SVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVP 129
           S++ YQ+    N CL CH        GAP +S TH+ D DG     VA RR+FC QCHVP
Sbjct: 72  SIDKYQIDMKANECLACHEWRKSGERGAPTLSMTHYQDRDGLQTDTVASRRWFCSQCHVP 131

Query: 130 QADTAPIVGNTFTPSKG 146
           QAD   +V N F  S  
Sbjct: 132 QADAPALVENLFQSSGQ 148


>UniRef50_Q487G5 Periplasmic nitrate reductase, cytochrome c-type subunit n=3
           Tax=Gammaproteobacteria RepID=Q487G5_COLP3
          Length = 167

 Score =  165 bits (417), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 13/148 (8%)

Query: 10  LCQWTAMLALVVSGAVWAANG-----------VDFSQSPEVSGTQEGAI--RMPKEQDRM 56
           L    ++L L VS  +++ N                 +  +   +E  I  ++  +  + 
Sbjct: 6   LAAIASLLVLAVSPIMYSLNANAADKETVNSVATLRDATPIDVQKEPNIIPKVINKDIKQ 65

Query: 57  PLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEV 116
             NY  QPP+IPH+   Y+V  N N+C+ CH       + AP +S TH+MD DG   AEV
Sbjct: 66  GRNYPMQPPVIPHTTRSYEVNKNNNKCMSCHSRHRTEKSQAPMVSVTHYMDRDGNFLAEV 125

Query: 117 APRRYFCLQCHVPQADTAPIVGNTFTPS 144
           +PRRYFC QCHV Q D  P+V NTF   
Sbjct: 126 SPRRYFCNQCHVTQLDAEPLVENTFVDM 153


>UniRef50_A6VQY4 Nitrate reductase cytochrome c-type subunit (NapB) n=13
           Tax=Pasteurellaceae RepID=A6VQY4_ACTSZ
          Length = 143

 Score =  164 bits (416), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 2/141 (1%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPP 65
           + +             + A   ++ +   Q PE            K+   +P  + +QPP
Sbjct: 1   MMRKYLALILTALAGFAVAETPSSNLTMEQMPE--NVAPAYTNPQKDVGNIPTTFPHQPP 58

Query: 66  MIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQ 125
           ++PHS+ G QVT N N+CL CH  E   TTGAPR+  +HF+D DGK     +PRRYFCLQ
Sbjct: 59  LVPHSIRGLQVTKNANQCLGCHSPEVSPTTGAPRVPESHFLDRDGKRTEGTSPRRYFCLQ 118

Query: 126 CHVPQADTAPIVGNTFTPSKG 146
           CHV Q D  PIV N F   + 
Sbjct: 119 CHVQQTDVNPIVQNKFETIRK 139


>UniRef50_B6R9T8 Periplasmic nitrate reductase, diheme cytochrome c subunit n=1
           Tax=Pseudovibrio sp. JE062 RepID=B6R9T8_9RHOB
          Length = 135

 Score =  163 bits (413), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 3/135 (2%)

Query: 16  MLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMP---KEQDRMPLNYVNQPPMIPHSVE 72
           M  L ++G        +  +S       E     P    +  R+   +  QPP++PH  E
Sbjct: 1   MAVLNLTGFAALNAHAEGVKSLRGVQVDEPVFVEPIARPQNTRVNREFRQQPPLVPHKTE 60

Query: 73  GYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQAD 132
            YQV    N+CL CH   +     AP +S TH+ D +G+   +VA  R+FC QCHVPQ +
Sbjct: 61  AYQVDLKVNQCLTCHDWANAGEKKAPTLSMTHYADREGRQLDQVAGTRWFCTQCHVPQVE 120

Query: 133 TAPIVGNTFTPSKGY 147
             P+V N FTPS   
Sbjct: 121 AEPLVENEFTPSSKR 135


>UniRef50_A6Q601 Periplasmic nitrate reductase, small subunit n=1 Tax=Nitratiruptor
           sp. SB155-2 RepID=A6Q601_NITSB
          Length = 193

 Score =  163 bits (413), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 75/171 (43%), Gaps = 32/171 (18%)

Query: 8   KALCQWTAMLALVVSGAVWAANGVDFSQSPE------VSGTQEGAIRMPKEQDRMPLNYV 61
           K L   +A +A+ ++    AA+    S+         V    E +   P    R   +Y 
Sbjct: 4   KKLVGVSAAVAIFLAAGCGAASQKVVSEHELSYGSKGVPPKVEYSKAAPGTSQRFQRSYE 63

Query: 62  NQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGK--------- 111
           N PPMIPHS++G   +T N N CL CH     ++ GA  + PTHF D   K         
Sbjct: 64  NAPPMIPHSIDGLVPITLNNNACLGCHMPNVAKSMGATPLPPTHFKDFFFKTKEKLIKQK 123

Query: 112 ----------------VGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
                             A++AP+RY C+QCH PQA+  P+V NTF P   
Sbjct: 124 LYEDVKAYKQRLSLMAKKADIAPQRYNCVQCHAPQANAKPLVANTFKPDFR 174


>UniRef50_B9KCP9 Periplasmic nitrate reductase, small subunit, cytochrome c-type
           protein n=3 Tax=Campylobacterales RepID=B9KCP9_CAMLR
          Length = 172

 Score =  162 bits (409), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 3/137 (2%)

Query: 10  LCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPH 69
           L     +    V                      + +  M  E   +  ++ N PP+IPH
Sbjct: 14  LISACGLAVKSVDSKDIGLRKTSLESENVELLDAKYSQAMAGESVLIERSFENAPPLIPH 73

Query: 70  SVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--SDGKVGAEVAPRRYFCLQC 126
           ++E    +T + N CL CH     +  GA  +  +H+ D   +      ++  R+ C QC
Sbjct: 74  TLEDMLPITKDNNICLSCHDQSVAKDVGATPLPKSHYYDFRKNKSTKDMISDARFNCTQC 133

Query: 127 HVPQADTAPIVGNTFTP 143
           HVPQ+D  P+VGN+F  
Sbjct: 134 HVPQSDAKPLVGNSFEA 150


>UniRef50_C1D9G6 Nitrate reductase n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D9G6_LARHH
          Length = 146

 Score =  161 bits (407), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 42/121 (34%), Positives = 63/121 (52%)

Query: 27  AANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQC 86
           AA+         +  +     +  K+  R+  +YV QPP+IPH V  Y+++TN N+C+ C
Sbjct: 26  AADNAPLEGQAALGHSATDMYKPIKDSKRIVRDYVQQPPLIPHDVSKYEISTNFNKCMDC 85

Query: 87  HGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           H    Y      R+ P+HF    G+  + ++P RYFC QCHVPQ D  P+V N +  S  
Sbjct: 86  HSAARYVEMNTTRVPPSHFKTRTGQELSNLSPSRYFCTQCHVPQVDARPLVNNAYQSSTR 145

Query: 147 Y 147
            
Sbjct: 146 K 146


>UniRef50_B2V811 Nitrate reductase cytochrome c-type subunit (NapB) n=2
           Tax=Hydrogenothermaceae RepID=B2V811_SULSY
          Length = 216

 Score =  160 bits (404), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 55/126 (43%), Gaps = 2/126 (1%)

Query: 23  GAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTN 81
           G   A    + +  P +   +      P    +    Y N PP IPHS EG   +T   N
Sbjct: 47  GIRQAPVEEEDTAPPAIIDPEYAPKPPPGTSKKYKRAYENAPPQIPHSTEGLLPITKENN 106

Query: 82  RCLQCHGVESYRTTGAPRISPTHFMD-SDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNT 140
            CL CH  E  +   A  I PTHF++   G+    +   RY C QCH PQ D  P+V NT
Sbjct: 107 ACLGCHMPEVAKAVKATPIPPTHFINFRTGQKLNHLYQGRYNCTQCHAPQLDVQPVVKNT 166

Query: 141 FTPSKG 146
           F P   
Sbjct: 167 FKPDYR 172


>UniRef50_Q53177 Diheme cytochrome c napB n=5 Tax=Alphaproteobacteria
           RepID=NAPB_RHOS4
          Length = 154

 Score =  159 bits (403), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/113 (42%), Positives = 64/113 (56%)

Query: 32  DFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVES 91
             +  P              +  R+  NY  QPP+IPHS+EGYQ++ N NRCL+CH  + 
Sbjct: 31  TGADRPMSEVAAPPLPETITDDRRVGRNYPEQPPVIPHSIEGYQLSVNANRCLECHRRQY 90

Query: 92  YRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
                AP IS THF D +G++ A+V+PRRYFC  CHVPQ +  P+V N F   
Sbjct: 91  SGLVAAPMISITHFQDREGQMLADVSPRRYFCTACHVPQTNAQPLVTNEFRDM 143


>UniRef50_A1K382 Probable diheme cytochrome C n=1 Tax=Azoarcus sp. BH72
           RepID=A1K382_AZOSB
          Length = 155

 Score =  157 bits (397), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 1/107 (0%)

Query: 36  SPEVSGTQEGAIRMPKEQD-RMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRT 94
           +P +       ++ P   D R    Y  QPP+IPH +EGYQ+  N NRC+ CH       
Sbjct: 29  TPLMEERTPPPLQNPDNSDVRRQRAYAMQPPIIPHKIEGYQLDRNVNRCMMCHARTRTEQ 88

Query: 95  TGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTF 141
           + AP IS +HF D DG   AE++PRRYFCLQCHVPQ    PIV N F
Sbjct: 89  SQAPMISVSHFTDRDGNFLAELSPRRYFCLQCHVPQVPVNPIVENRF 135


>UniRef50_Q4HRN5 NapB periplasmic nitrate reductase n=2 Tax=Campylobacter
           RepID=Q4HRN5_CAMUP
          Length = 173

 Score =  157 bits (397), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 15/155 (9%)

Query: 6   LKKALCQWTAMLALVVSGAVWAANGVDFSQSP-----------EVSGTQEGAIRMPKEQD 54
           +K  +   +A  AL +  +    NGV   Q              V      +     E  
Sbjct: 1   MKNKIFLVSAAAALFL-VSCAVNNGVSSEQIGLRKANLNNENSVVLSDINYSGLGAGESA 59

Query: 55  RMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMD--SDGK 111
            +  ++ N PP+IPH+++G   +T  +N CL CH     +  GA     +H+ D   +  
Sbjct: 60  LLERSFENAPPLIPHNLDGMLPITKESNSCLTCHDKAIAQDVGAIAAPASHYYDFWKNKP 119

Query: 112 VGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
            G  ++  RY C QCHV Q+D  P+VGNTF     
Sbjct: 120 TGDVISEIRYNCTQCHVAQSDAKPLVGNTFKAEFK 154


>UniRef50_Q02IZ3 Cytochrome c-type protein NapB n=10 Tax=Pseudomonas
           RepID=Q02IZ3_PSEAB
          Length = 163

 Score =  156 bits (395), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 27  AANGVDFSQSPEVSGTQEGAIRMPKEQD--RMPLNYVNQPPMIPHSVEGYQVTTNTNRCL 84
           A           ++ ++       +E    +   NY  QPP IPHS+ GY++  ++N+CL
Sbjct: 29  APAPDGRRPGGTLAESRPAPPLAAEENKDLKRERNYPEQPPTIPHSIVGYRIDKDSNKCL 88

Query: 85  QCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFT 142
            CH   +   T A  IS TH+MD DG+  A V+PRRYFC+QCHVPQ D  P+V N F 
Sbjct: 89  SCHSRANSARTQAVMISITHYMDRDGQPLAAVSPRRYFCVQCHVPQQDVKPLVDNRFE 146


>UniRef50_D0U4E1 Periplasmic nitrate reductase subunit NapB n=1 Tax=uncultured SUP05
           cluster bacterium RepID=D0U4E1_9GAMM
          Length = 181

 Score =  155 bits (392), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 41  GTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRI 100
                  +  K+ D    ++++QPP+IPH  +G ++T   N+CL CH  E++R   A ++
Sbjct: 77  SLMPPVGKWIKDAD-FTRSFIDQPPLIPHKTKGMRITMKKNKCLSCHSNENWRDADAVKM 135

Query: 101 SPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFT 142
           + +HFM    K   EV+PRRYFC QCHVPQ D  P++G+ + 
Sbjct: 136 TASHFMTRSNKRLKEVSPRRYFCTQCHVPQVDNKPLIGSDYV 177


>UniRef50_A9I7N5 Periplasmic nitrate reductase, cytochrome c-type protein n=1
           Tax=Bordetella petrii DSM 12804 RepID=A9I7N5_BORPD
          Length = 151

 Score =  155 bits (391), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 6   LKKALC-QWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKE-------QDRMP 57
           +K+AL      +LA ++ G   A      +       +                    +P
Sbjct: 1   MKRALYKTALGLLAGLMIGMPPALADDPSTVQSLRQNSVADVEHEAGHYRQELDAGATLP 60

Query: 58  LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVA 117
            ++V QPP++PH+   Y VT   N+CL CH     + T +P+IS THF D+ G+  + V+
Sbjct: 61  RDFVQQPPLVPHASSNYPVTLKFNKCLDCHAWARAQATNSPKISITHFRDAQGRELSSVS 120

Query: 118 PRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
           P RYFC QCHV Q+D  P+V NTF   KG
Sbjct: 121 PSRYFCQQCHVTQSDAKPLVENTFQRVKG 149


>UniRef50_C7RM81 Nitrate reductase cytochrome c-type subunit (NapB) n=1
           Tax=Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1 RepID=C7RM81_9PROT
          Length = 155

 Score =  154 bits (389), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 1/142 (0%)

Query: 2   KSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYV 61
           KS     A+         + +    +  G D +   +    +  + + P  +  +   + 
Sbjct: 3   KSLKFTVAIVASCLASLALAADGANSMRGSDVAAPDQAPEVKTYSGKRPGTEAPVARTFS 62

Query: 62  NQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
            QPP+IPH+VE + ++    N+CL CH   +Y+   AP+I  +HF+D +GK  AE    R
Sbjct: 63  TQPPVIPHAVENFDEINLEGNQCLDCHSAATYQKKKAPKIGDSHFLDREGKKHAEATGGR 122

Query: 121 YFCLQCHVPQADTAPIVGNTFT 142
           Y C+QCHVPQ D  P+V NTF 
Sbjct: 123 YNCVQCHVPQVDAPPLVDNTFK 144


>UniRef50_A0RQ33 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=2
           Tax=Campylobacter RepID=A0RQ33_CAMFF
          Length = 177

 Score =  153 bits (386), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 4/124 (3%)

Query: 28  ANGVDFSQSPEVSGTQ-EGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQ 85
              VD +    V+    +     P        ++ N PP+I HS++G   +T  +N CL 
Sbjct: 37  LRNVDLNDENNVANPDIKWLGDAPGTNKTFDRSFENAPPLISHSLDGLVPITIESNSCLS 96

Query: 86  CHGVESYRTTGAPRISPTHFMD-SDGKVG-AEVAPRRYFCLQCHVPQADTAPIVGNTFTP 143
           CH  E  +  G   +  +H +    GK    +V+  R+ C QCHVPQAD  P+  N F  
Sbjct: 97  CHVPEVAKDAGTIPVPKSHLVVLRTGKDLNGQVSDERFNCTQCHVPQADVKPLKKNNFKA 156

Query: 144 SKGY 147
              Y
Sbjct: 157 DFRY 160


>UniRef50_A8UYP3 Periplasmic nitrate reductase small subunit (Cytochrome C-type
           protein) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1
           RepID=A8UYP3_9AQUI
          Length = 180

 Score =  152 bits (385), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 14/158 (8%)

Query: 3   SHDLKKALCQWTAMLALVVSGAVWAANGVDF--------SQSPEVSGTQEGAIRMPKEQD 54
           S  L  A    + +   V      A +  +          + P      E     P    
Sbjct: 4   SKGLVLASVGASVLFLGVAQAVKEAISEEELGYRNQTLYDEKPVAPPKVEFIKTPPGSGK 63

Query: 55  RMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTH-----FMDS 108
           +    Y N PP IPHSVEG   +    N CL CH  +  ++ GA  I  TH     F   
Sbjct: 64  KFARAYENAPPQIPHSVEGLIPIKPGQNACLGCHMPDVAKSVGATPIPKTHIALDLFTKG 123

Query: 109 DGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKG 146
             K   ++ P RY C+ CH  QAD  P+V N F P   
Sbjct: 124 GKKKELKIDPARYQCVMCHAAQADAPPLVKNVFKPEFR 161


>UniRef50_C5EY43 NapB periplasmic nitrate reductase n=2 Tax=Helicobacter
           RepID=C5EY43_9HELI
          Length = 174

 Score =  151 bits (381), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 14/159 (8%)

Query: 4   HDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGT----------QEGAIRMPKEQ 53
                 L    + LAL++  +  +       +      T           +   +   E 
Sbjct: 1   MKFGTILVAGVSTLALIL-VSCKSIQSYSSEEIGLRKTTLFNEEAEIKAYDYTGKTAGES 59

Query: 54  DRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDS--DG 110
             +  ++ N PPMI H+++G   +T + N C  CH  E      A  +  +HF +   + 
Sbjct: 60  TLIERSFENAPPMISHNLDGMLPITRDNNACTSCHLPEIAEAVAATPMPKSHFYNFRENK 119

Query: 111 KVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK 149
            +  ++   R+ C+ CH  Q D  P+VGN F       +
Sbjct: 120 NLDGQMDENRFNCVICHTTQVDAPPLVGNNFKADFRQEE 158


>UniRef50_A8ERQ6 Periplasmic nitrate reductase, small subunit, cytochrome c-type
           protein NapB n=1 Tax=Arcobacter butzleri RM4018
           RepID=A8ERQ6_ARCB4
          Length = 201

 Score =  150 bits (379), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 64/184 (34%), Gaps = 36/184 (19%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDF--------SQSPEVSGTQEGAIRMPKE 52
           MK H L   +    +        A                 S+   VS   +        
Sbjct: 1   MKLHKLTLVVIAIASFFISSAFAADSKIKDSTLGLRHTNLLSEEKTVSDETKYGTDAAGT 60

Query: 53  QDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESYRTTGAPRISPTHF------ 105
             ++   + N PPMIPH VEG   +  N N+C  CH      + GA  I  +HF      
Sbjct: 61  STKIKRAFENAPPMIPHDVEGMLPIEINNNQCTACHDPLVAESMGATPIPKSHFTSFREE 120

Query: 106 --MDSDGKV-------------------GAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
             +DS+G +                      ++  R+ C  CH PQ+++A +  N F+P 
Sbjct: 121 VKLDSNGNLEREGKVVENSSDLKGVKKPLDHLSNARFNCSACHAPQSNSANVPKNNFSPE 180

Query: 145 KGYG 148
              G
Sbjct: 181 FRSG 184


>UniRef50_Q2W3T4 Nitrate reductase cytochrome c-type subunit n=5 Tax=Proteobacteria
           RepID=Q2W3T4_MAGSA
          Length = 151

 Score =  149 bits (375), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 45/144 (31%), Positives = 64/144 (44%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
           MK+     AL     +   V +  V A        +         AI    E  +    Y
Sbjct: 1   MKTKIKAIALALALVLGMGVTAFGVVAEEVKSLRTNAAPEADAPPAIYKVMEGSKHERAY 60

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
             QPP++PH+ + Y++    N+CL+CH         AP+IS  H++D +G     V   R
Sbjct: 61  RQQPPLVPHTTDKYEIDLKVNQCLRCHEWPYSDQEKAPKISDLHYLDRNGVRQDVVNGNR 120

Query: 121 YFCLQCHVPQADTAPIVGNTFTPS 144
           YFC QCHVPQ D  P+V N F  +
Sbjct: 121 YFCKQCHVPQNDAKPLVNNKFQAA 144


>UniRef50_A7BM57 Periplasmic nitrate reductase beta subunit n=1 Tax=Beggiatoa sp. SS
           RepID=A7BM57_9GAMM
          Length = 140

 Score =  144 bits (362), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 38  EVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGA 97
           E+S   E   R+P +       Y  Q P+IPH +EGY++T   N+CL CH          
Sbjct: 42  ELSAITEW-KRVPSDFQTFLPAYEQQAPLIPHFIEGYKITLEGNKCLTCHKKT------- 93

Query: 98  PRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPS 144
             +SPTH  D +GKV   V  R YFC  CHV Q D  P++ NTF  +
Sbjct: 94  --LSPTHLKDRNGKVLDTVDNRLYFCTLCHVSQVDAQPLIDNTFESA 138


>UniRef50_A7BUA2 Periplasmic nitrate reductase small subunit n=1 Tax=Beggiatoa sp.
           PS RepID=A7BUA2_9GAMM
          Length = 141

 Score =  143 bits (361), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 1   MKSHDLKKALCQWTAMLAL--VVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPL 58
           MK       +  + ++++L  ++      A+  D    PE +       + P E +  PL
Sbjct: 1   MKKIYRLGIILAFGSLISLPSMIFAQDDIASLRDGISIPETNAAVPWN-KFPVEPESFPL 59

Query: 59  NYVNQPPMIPHSVEGYQVTTNTNRCL-QCHGVESYRTTGAPRISPTHFMDSDGKVGAEVA 117
           NY  Q  +IPH +EG ++   +N+C+  CH +         + S +H+ D DG +  E+ 
Sbjct: 60  NYEEQAALIPHLIEGQRIDLESNQCMDSCHTI-------LKKPSASHYEDRDGNILDEID 112

Query: 118 PRRYFCLQCHVPQADTAPIVGNTFTPSK 145
            RRY C  CH+PQ D  P+  N F    
Sbjct: 113 SRRYICTSCHLPQTDAQPLRENLFESVS 140


>UniRef50_B9L8L1 Periplasmic nitrate reductase, diahem cytochrome C subunit n=2
           Tax=Nautiliaceae RepID=B9L8L1_NAUPA
          Length = 157

 Score =  142 bits (359), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 5/129 (3%)

Query: 21  VSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTN 79
           V+G   A    D    PE+       I  P +  + P ++V  PPMIPHSVEG   +T N
Sbjct: 31  VTGIREANLNADSQNLPELKLNTTQPI--PGKVKKQPASFVTAPPMIPHSVEGMVPITKN 88

Query: 80  TNRCLQCHGVESYRTTGAPRISPTHFMD--SDGKVGAEVAPRRYFCLQCHVPQADTAPIV 137
            N CL CH  ++ ++ G   I P+HF+D    GK  +++A  RY C  CH PQA   P++
Sbjct: 89  NNMCLNCHMPQAAKSLGVTPIPPSHFVDNFEGGKKSSKLAGSRYNCTLCHAPQAMVDPVI 148

Query: 138 GNTFTPSKG 146
            N F   + 
Sbjct: 149 ENKFESLRK 157


>UniRef50_B9D0H5 PeriplasmiC nitrate reductase, diheme cytochrome c subunit n=2
           Tax=Campylobacter RepID=B9D0H5_WOLRE
          Length = 227

 Score =  142 bits (359), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 30  GVDFSQSPEVSGTQ-EGAIRMPKEQDRMPLNYVNQPPMIPHSVEG-YQVTTNTNRCLQCH 87
             D     EV        +    E  R    + N PPMIPH +EG   +TT+ N C+ CH
Sbjct: 88  ASDVLDEDEVKLIDINWTLPAAGEAQRYERAFENAPPMIPHDLEGLMPITTDNNMCISCH 147

Query: 88  GVESYRTTGAPRISPTHFMD--SDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSK 145
             E     GA  I  +H          G +++  R+ C  CH PQA+  P   N F P  
Sbjct: 148 MPEVAEGIGATSIPKSHLYSIRFSEDKGGQLSQDRFVCTVCHAPQANIEPKFKNNFVPEY 207

Query: 146 G 146
            
Sbjct: 208 R 208


>UniRef50_A7GZP2 Periplasmic nitrate reductase, diheme cytochrome c subunit n=15
           Tax=Campylobacter RepID=A7GZP2_CAMC5
          Length = 175

 Score =  140 bits (353), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 4/118 (3%)

Query: 33  FSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVES 91
             +S                  R   ++ N PP IPH  EG   +T + N C+ CH  E 
Sbjct: 39  LDESNVTLKDINYTKEPAGMAKRFDRSFENAPPFIPHDTEGLVPITKDLNMCVTCHMPEF 98

Query: 92  YRTTGAPRISPTHFMD-SDGKVG-AEVAPRRYFCLQCHV-PQADTAPIVGNTFTPSKG 146
            + +GA  I  +H  D  + K    ++   RY C  CHV  Q+    +VGN F P   
Sbjct: 99  AKDSGATPIPASHLYDIRNKKDLAGQLDDERYVCTTCHVEQQSGITQLVGNKFKPEFR 156


>UniRef50_A1RG48 Periplasmic nitrate reductase subunit NapB n=20 Tax=Shewanella
           RepID=A1RG48_SHESW
          Length = 143

 Score =  139 bits (351), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 18/143 (12%)

Query: 13  WTAMLALVVSGAVWAANGVDFSQSPEVSGT------------QEGAIRMPKEQDRMPLNY 60
              + A+VV+         D + +P    +             +     P     +  ++
Sbjct: 4   ILTLAAIVVAIGGCTGQKADTNSAPVTINSLAGTSAITDIRPADAMPVFPTRGAALERSF 63

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
            +QPP+IPH  + Y++T + N CL CH  E      A  ++ +H +D  G +  +     
Sbjct: 64  SDQPPLIPHK-DDYKITLDKNGCLSCHSWEKAERMKATPVAKSHVIDDKGNLNGQ----N 118

Query: 121 YFCLQCHVPQADTA-PIVGNTFT 142
           YFC QCHV QA+   P+V N F+
Sbjct: 119 YFCTQCHVAQAENKAPLVENKFS 141


>UniRef50_A6Q703 Periplasmic nitrate reductase, small subunit n=2
           Tax=Epsilonproteobacteria RepID=A6Q703_SULNB
          Length = 322

 Score =  137 bits (346), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 56/161 (34%), Gaps = 35/161 (21%)

Query: 20  VVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTT 78
           VV   V                  +     P    +    YVN PPMIPHSVEG   +T 
Sbjct: 142 VVDETVLGLRKTSLFDEKVAPVKGKEDRPAPGTAPKFERAYVNAPPMIPHSVEGLLPITK 201

Query: 79  NTNRCLQCHGVESYRTTGAPRISPTHFMD-------SDG--------------------- 110
           + N+CL CH  +  +  GA  I P+HF +        +G                     
Sbjct: 202 DNNQCLGCHMPDVAKGVGATPIPPSHFTNYRPTTVYKNGELVKEGKKVGIQKGDMGNVGD 261

Query: 111 ------KVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSK 145
                 K    +   R+ C QCH PQA+    V NTF    
Sbjct: 262 IKLAKVKKLNHLYQGRFNCSQCHAPQANVKTAVANTFKSDG 302


>UniRef50_Q30QD7 Periplasmic nitrate reductase subunit NapB n=2
           Tax=Campylobacterales RepID=Q30QD7_SULDN
          Length = 236

 Score =  133 bits (334), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 23/135 (17%)

Query: 34  SQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGY-QVTTNTNRCLQCHGVESY 92
           ++   V+   E          ++   + + PPMIPH   G   + +  NRC+ CH  E  
Sbjct: 52  TEDATVASKTEYRSAQATTSTKIKRAFQDAPPMIPHDTVGMLPIKSEDNRCVTCHMPEIA 111

Query: 93  RTTGAPRISPTHFMDSDGK----------------------VGAEVAPRRYFCLQCHVPQ 130
              GA  I  +HF D   +                        +++   R+ C QCH PQ
Sbjct: 112 GAMGATPIPVSHFTDFRPRAKLVNNEVVIATDTYKNETQIVKKSDLQNARFNCNQCHAPQ 171

Query: 131 ADTAPIVGNTFTPSK 145
           +    +V NTF P  
Sbjct: 172 SQGNLLVENTFEPVY 186


>UniRef50_A9FEA0 Diheme cytochrome C n=1 Tax=Sorangium cellulosum 'So ce 56'
           RepID=A9FEA0_SORC5
          Length = 257

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 43/140 (30%), Gaps = 29/140 (20%)

Query: 18  ALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVT 77
           A +  GA       D      V  + E       E+      Y   PP IPH +E     
Sbjct: 64  AGMYEGAFARLEAADADLYAPVEQS-EADREAALERRASRRAYDGAPPTIPHRIEQ---- 118

Query: 78  TNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRY-FCLQCHVPQADTAPI 136
                CL CH     R         +H              RRY  C QCHV  AD  P+
Sbjct: 119 LGAPDCLSCHERGL-RVANLTAPRMSH--------------RRYESCTQCHVVSADPRPL 163

Query: 137 VG------NTFT--PSKGYG 148
                   NTF   PS   G
Sbjct: 164 AETPPPPDNTFAGMPSPRRG 183



 Score = 56.2 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 28/113 (24%), Gaps = 31/113 (27%)

Query: 31  VDFSQSPEVSGTQEGAIRMPKEQDRM--PLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHG 88
           V     P                        Y   PP IPH       T   + C  CH 
Sbjct: 156 VSADPRPLAETPPPPDNTFAGMPSPRRGARAYEGAPPTIPHP------TLMRSECASCH- 208

Query: 89  VESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVP-----QADTAPI 136
                  GA  I  TH             P R  C QCH P     Q    P+
Sbjct: 209 ----GVHGALGIRSTH-------------PYRQSCTQCHAPSAELDQRAPRPL 244


>UniRef50_A4N8U4 Diheme cytochrome C NapB n=3 Tax=Haemophilus influenzae
          RepID=A4N8U4_HAEIN
          Length = 106

 Score = 69.3 bits (168), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 3  SHDLKKALCQ-WTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYV 61
          +  + K L   +TA+ A  +  +   A G D +Q+ E           P++ +   LNYV
Sbjct: 2  TKQVSKILAGLFTALFAGSLMASDAPAVGKDLTQAAE--NIPPAFHNAPRQGELPALNYV 59

Query: 62 NQPPMIPHSVEGYQVTTN 79
          NQPPM+PHSV  YQVT  
Sbjct: 60 NQPPMVPHSVANYQVTKK 77


>UniRef50_A7TBY3 Predicted protein n=2 Tax=cellular organisms RepID=A7TBY3_NEMVE
          Length = 258

 Score = 48.1 bits (113), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 27/85 (31%), Gaps = 15/85 (17%)

Query: 58  LNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGV-ESYRTTGAPRISPTHFMDSDGKVGAEV 116
             Y   PP IPH V+  + +     CLQCH          A      H            
Sbjct: 110 RAYHGAPPSIPHPVKA-ERSMGGKTCLQCHENGGFTEKFKAYAPVTPH------------ 156

Query: 117 APRRYFCLQCHVPQADTAPIVGNTF 141
            P    C QCHV Q   +   G  F
Sbjct: 157 -PEMVNCKQCHVQQQANSLFKGTNF 180



 Score = 45.4 bits (106), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 23/65 (35%)

Query: 64  PPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFC 123
           PP+IPH     Q+    N CL CH       +    I  TH             P R  C
Sbjct: 198 PPVIPH-----QIQMREN-CLSCH----AGPSAPKEIRVTH-------------PERINC 234

Query: 124 LQCHV 128
            QCH 
Sbjct: 235 RQCHA 239


>UniRef50_C8WHW4 Putative uncharacterized protein n=1 Tax=Eggerthella lenta DSM 2243
           RepID=C8WHW4_EGGLE
          Length = 110

 Score = 44.7 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 26/132 (19%)

Query: 1   MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNY 60
           MK H +  AL    A+    V+G    A   D + +                        
Sbjct: 1   MKKHMITAALVAVMALGLGTVAGCSQEAPREDVNANVPAG-------------------- 40

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCH---GVESYRTTGAPRISPTHFMDSDGKVGAEVA 117
              PP++P S +G         C  CH      +     A  +   H+   D     E+ 
Sbjct: 41  --APPLMPTSHDGRFENLGAAGCYGCHGANDQANPMLADATALPADHYAGGDAGSL-EMD 97

Query: 118 PRRYFCLQCHVP 129
           P    C+ CH  
Sbjct: 98  PTHEQCITCHAQ 109


>UniRef50_A8VWV9 Nitrite reductase (Cytochrome; ammonia-forming) n=2 Tax=Bacillus
           selenitireducens MLS10 RepID=A8VWV9_9BACI
          Length = 483

 Score = 42.0 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 4/49 (8%)

Query: 83  CLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAP---RRYFCLQCHV 128
           C  CH           R S T+ MD  G    E +    R Y C QCHV
Sbjct: 177 CSDCHDPA-TMELRISRPSFTNAMDRRGIDVTEASHNDMRSYVCAQCHV 224


>UniRef50_A5GB58 Putative uncharacterized protein n=2 Tax=Geobacter
           RepID=A5GB58_GEOUR
          Length = 595

 Score = 41.6 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 20/69 (28%), Gaps = 13/69 (18%)

Query: 74  YQVTTNTNRCLQCHGVESYRTTGAPRIS----PTHFMDSDGKVG--AEVAPRRY------ 121
           Y   +   +C  CH         A +++      HF +           AP  Y      
Sbjct: 120 YPDPSAAGKCFDCHKPAFLGNYEATKVATAVEKAHFYNMTASQLDPDNFAPAMYVSANYQ 179

Query: 122 -FCLQCHVP 129
             C  CH P
Sbjct: 180 KSCTSCHDP 188


>UniRef50_A6TSA2 Nitrite reductase (Cytochrome; ammonia-forming) n=2
           Tax=Alkaliphilus RepID=A6TSA2_ALKMQ
          Length = 425

 Score = 41.2 bits (95), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 3/46 (6%)

Query: 83  CLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHV 128
           C  CH  E             HF D+  ++  E+ P    C QCHV
Sbjct: 175 CYNCHRNEPGERVQVTSP---HFADAVERLDLEIPPGNMACAQCHV 217


>UniRef50_C6MWS8 Putative uncharacterized protein n=1 Tax=Geobacter sp. M18
           RepID=C6MWS8_9DELT
          Length = 105

 Score = 39.7 bits (91), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 40/131 (30%)

Query: 7   KKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPM 66
            K++ +   +L  ++S  +      +    P+++     A++ P +           PP+
Sbjct: 1   MKSILRPVLLLTALISLTMALPAFAEEQPEPDLAA---DALQAPGD-----------PPV 46

Query: 67  IPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVA--PRRYFCL 124
           IPH+V+      +   C  CH                     DG   A V   P R  C 
Sbjct: 47  IPHAVKP---NQDGEGCNVCH--------------------RDGVKNAPVTSHPERLNCT 83

Query: 125 QCHVPQADTAP 135
            CHV Q +  P
Sbjct: 84  SCHV-QGEVKP 93


>UniRef50_C8S748 Putative uncharacterized protein n=1 Tax=Ferroglobus placidus DSM
           10642 RepID=C8S748_FERPL
          Length = 181

 Score = 38.9 bits (89), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 23/137 (16%)

Query: 7   KKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLN------- 59
            K L     + +L++  A          +  E         + P E   +P +       
Sbjct: 1   MKKLFIAIFLTSLLLLCAGEKPEEKVTPEKKETPKATPKPEKTPTEATPLPRSECENCHN 60

Query: 60  -----YVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP---THFMDSDGK 111
                YV Q     + V+G+    N + C+ CH  +    +    +      H   +D K
Sbjct: 61  NPKRQYVPQA----YDVKGH---KNADYCISCHLKDYLNESKEFMLEKLHEKHVTQADCK 113

Query: 112 V-GAEVAPRRYFCLQCH 127
           V   E+    + CL CH
Sbjct: 114 VCHEEIGKSEWECLNCH 130


>UniRef50_Q1ITP8 Multiheme cytochrome n=1 Tax=Candidatus Koribacter versatilis
           Ellin345 RepID=Q1ITP8_ACIBL
          Length = 487

 Score = 38.9 bits (89), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 31/100 (31%)

Query: 52  EQDRMPLNYVNQPPMIP------HSVEGYQVT-----TNTNR------CLQCHGVESYRT 94
           ++ ++P NY  Q P +P      H VEG+ V+     T+ N+      CL CH       
Sbjct: 388 DKVKLPENYFQQVPTLPIKYGRGHPVEGHPVSDIMDLTDGNKVVKSINCLTCHQP----- 442

Query: 95  TGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTA 134
                    H    D  +  +      FC  CH  QA   
Sbjct: 443 ---------HASAKDNLLVKDQEANGKFCETCHSTQAAPQ 473


>UniRef50_B3E658 Putative uncharacterized protein n=1 Tax=Geobacter lovleyi SZ
           RepID=B3E658_GEOLS
          Length = 100

 Score = 38.5 bits (88), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 25/69 (36%)

Query: 61  VNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRR 120
              PP+IPH+V   Q   +   C  CH      +  AP                   P R
Sbjct: 40  EKHPPVIPHAV---QDDADGASCNGCH----TGSFKAP------------------HPDR 74

Query: 121 YFCLQCHVP 129
             C QCHVP
Sbjct: 75  LNCTQCHVP 83


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.306    0.133    0.439 

Lambda     K      H
   0.267   0.0415    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 871,645,014
Number of Sequences: 3077464
Number of extensions: 35187716
Number of successful extensions: 112356
Number of sequences better than 1.0e-01: 64
Number of HSP's better than  0.1 without gapping: 147
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 111986
Number of HSP's gapped (non-prelim): 242
length of query: 149
length of database: 1,040,396,356
effective HSP length: 112
effective length of query: 37
effective length of database: 695,720,388
effective search space: 25741654356
effective search space used: 25741654356
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 87 (38.1 bits)
