Phyre 2 alignment of P45563 with c3fhkF_

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Job Description | P45563
Confidence | 53.34% | Date | Thu Jan 5 12:03:16 GMT 2012
Rank | 49 | Aligned Residues | 40
% Identity | 20% | Template | c3fhkF_
PDB info | PDB header:structural genomics, unknown function | Chain: F: PDB Molecule:upf0403 protein yphp; | PDBTitle: crystal structure of apc1446, b.subtilis yphp disulfide2 isomerase
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | P | G | F | P | V | S | T | V | H | G | H | A | G | E | L | V | L | G | H | L | Q | G | V | P | V | V | C | M | K | G | R | G | H | F | Y | E | G | R | G | M | T | I | M | T | D | A | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | T | G | A | A | P | S | . | . | . | . | . | S | P | S | M | A | L | L | K | . | G | K | E | V | V | H | F | I | P | . | . | R | H | E | I | E | G | H | D | M | E | E | I | M | K | N | L
Template Known Secondary structure |  | G | T | T | S |  |  |  | . | . | . | . | . | S | S |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  | . | . | G | G | G | T | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 97 | . | . | 100 | . | . | . |  |  |  |  |  | . | . | . | . | . | . | 110 | . |  | . | . | . | . | . | . | . | . | 120 |  |  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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