BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (500 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P09835 Sensor protein uhpB n=121 Tax=Gammaproteobacteri... 993 0.0 UniRef50_A4W4T8 Integral membrane sensor signal transduction his... 764 0.0 UniRef50_D0M861 Sensor histidine protein kinase UhpB glucose-6-p... 408 e-112 UniRef50_D0YYF7 Sensor histidine protein kinase UhpB glucose-6-p... 390 e-107 UniRef50_A8G803 Integral membrane sensor signal transduction his... 388 e-106 UniRef50_Q65Q67 BaeS protein n=5 Tax=Pasteurellaceae RepID=Q65Q6... 356 1e-96 UniRef50_C5BB53 Sensor protein UhpB n=2 Tax=Edwardsiella RepID=C... 352 2e-95 UniRef50_A5EZW7 Sensor protein UhpB n=35 Tax=Vibrionaceae RepID=... 254 5e-66 UniRef50_A1JTJ3 Sensor protein n=48 Tax=Enterobacteriaceae RepID... 250 7e-65 UniRef50_D2TKU9 Two-component system sensor histidine kinase n=1... 246 1e-63 UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylo... 130 1e-28 UniRef50_Q1H355 Sensor protein n=3 Tax=Methylophilaceae RepID=Q1... 123 2e-26 UniRef50_C0N6J6 ATPase, histidine kinase-, DNA gyrase B-, and HS... 122 2e-26 UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ... 121 5e-26 UniRef50_B1Y7S0 Histidine kinase n=1 Tax=Leptothrix cholodnii SP... 121 6e-26 UniRef50_C6XAP9 PAS/PAC sensor signal transduction histidine kin... 120 8e-26 UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinas... 120 1e-25 UniRef50_Q0A524 Signal transduction histidine kinase, glucose-6-... 119 2e-25 UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase ... 115 3e-24 UniRef50_C6WWI1 Histidine kinase n=1 Tax=Methylotenera mobilis J... 115 4e-24 UniRef50_Q1H352 Signal transduction histidine kinase, glucose-6-... 114 9e-24 UniRef50_UPI0001AEBEC0 2-keto-4-pentenoate hydratase, putative n... 114 1e-23 UniRef50_C7RKP8 PAS/PAC sensor signal transduction histidine kin... 113 1e-23 UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=T... 113 1e-23 UniRef50_A1VQL5 Integral membrane sensor signal transduction his... 113 2e-23 UniRef50_Q7X326 Putative sensory transduction histidine kinase n... 112 3e-23 UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kin... 112 4e-23 UniRef50_UPI0000E0F7D9 sensory histidine kinase in two-component... 112 4e-23 UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophi... 112 5e-23 UniRef50_B2ID99 Integral membrane sensor signal transduction his... 112 5e-23 UniRef50_A6T1A4 Signal transduction histidine kinase n=2 Tax=Oxa... 110 1e-22 UniRef50_C2FSZ8 Possible sensor kinase of Zn/Pb responsive two-c... 110 2e-22 UniRef50_C0N7Q8 ATPase, histidine kinase-, DNA gyrase B-, and HS... 109 2e-22 UniRef50_Q01NC5 Integral membrane sensor signal transduction his... 108 7e-22 UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Lab... 107 1e-21 UniRef50_Q07MS8 Signal transduction histidine kinase, glucose-6-... 106 2e-21 UniRef50_UPI0000E0F7AF sensory histidine kinase in two-component... 106 2e-21 UniRef50_B0P062 Putative uncharacterized protein n=1 Tax=Clostri... 106 2e-21 UniRef50_B6BUB0 Multi-sensor signal transduction histidine kinas... 106 3e-21 UniRef50_Q4K8Y6 Sensor histidine kinase, putative n=8 Tax=Pseudo... 105 3e-21 UniRef50_B2A6W3 Integral membrane sensor signal transduction his... 105 4e-21 UniRef50_A8LRP9 Integral membrane sensor signal transduction his... 105 5e-21 UniRef50_Q2SNP1 Signal transduction histidine kinase, glucose-6-... 104 6e-21 UniRef50_Q60AR7 Sensor protein n=1 Tax=Methylococcus capsulatus ... 104 7e-21 UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9... 104 8e-21 UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=... 104 1e-20 UniRef50_C5ATJ2 Sensor histidine kinase n=1 Tax=Methylobacterium... 104 1e-20 UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q4... 103 2e-20 UniRef50_B2JBH1 Integral membrane sensor signal transduction his... 102 2e-20 UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kin... 102 3e-20 UniRef50_C0N6H6 Histidine kinase domain protein n=1 Tax=Methylop... 102 3e-20 UniRef50_Q01NL1 Histidine kinase n=1 Tax=Candidatus Solibacter u... 102 3e-20 UniRef50_Q2BPE6 Sensor histidine kinase n=1 Tax=Neptuniibacter c... 102 3e-20 UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus... 102 4e-20 UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Be... 102 5e-20 UniRef50_Q0G657 Two-component sensor histidine kinase n=2 Tax=Au... 102 5e-20 UniRef50_C6QC56 Histidine kinase n=1 Tax=Hyphomicrobium denitrif... 102 5e-20 UniRef50_A6WW19 Integral membrane sensor signal transduction his... 101 6e-20 UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinas... 101 7e-20 UniRef50_A3TPE1 Two-component system, sensor protein n=1 Tax=Jan... 101 8e-20 UniRef50_Q11VH8 Sensor histidine protein kinase n=1 Tax=Cytophag... 101 8e-20 UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 ... 100 9e-20 UniRef50_B8HNY8 Histidine kinase n=1 Tax=Cyanothece sp. PCC 7425... 100 1e-19 UniRef50_Q0BVA0 Two component system histidine kinase n=1 Tax=Gr... 100 1e-19 UniRef50_B6JD37 Signal transduction histidine kinase containing ... 100 1e-19 UniRef50_B9J9Z4 Two-component sensor histidine kinase protein n=... 100 2e-19 UniRef50_B1YJQ1 Integral membrane sensor signal transduction his... 100 2e-19 UniRef50_Q0EZ32 HrpX related protein n=1 Tax=Mariprofundus ferro... 100 2e-19 UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kin... 100 2e-19 UniRef50_B4WJL4 Histidine kinase domain protein n=1 Tax=Synechoc... 100 2e-19 UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuri... 99 3e-19 UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=... 99 3e-19 UniRef50_B3E9K0 Integral membrane sensor signal transduction his... 99 4e-19 UniRef50_C6QGF1 Histidine kinase n=1 Tax=Hyphomicrobium denitrif... 99 5e-19 UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinas... 99 5e-19 UniRef50_D1BWR4 Histidine kinase n=1 Tax=Xylanimonas cellulosily... 98 6e-19 UniRef50_A2SKA8 Methanol utilization control sensor protein MoxY... 98 6e-19 UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicate... 98 7e-19 UniRef50_B0CC26 Two-component sensor histidine kinase n=1 Tax=Ac... 98 7e-19 UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Ba... 98 7e-19 UniRef50_C9PG27 Sensor histidine kinase n=2 Tax=Vibrio RepID=C9P... 98 7e-19 UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3... 98 8e-19 UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Ox... 98 8e-19 UniRef50_B4UAL2 Integral membrane sensor signal transduction his... 98 9e-19 UniRef50_Q1YEP3 Sensor histidine kinase n=1 Tax=Aurantimonas man... 98 9e-19 UniRef50_D2S9S7 Integral membrane sensor signal transduction his... 97 1e-18 UniRef50_B8G147 Multi-sensor signal transduction histidine kinas... 97 1e-18 UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales... 97 1e-18 UniRef50_Q89IF2 Two-component sensor histidine kinase n=2 Tax=Br... 97 1e-18 UniRef50_Q01N85 Integral membrane sensor signal transduction his... 97 1e-18 UniRef50_Q3BTZ2 Sensor protein n=13 Tax=Xanthomonadaceae RepID=Q... 97 1e-18 UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Ba... 97 1e-18 UniRef50_A1SKV9 ATP-binding region, ATPase domain protein domain... 97 1e-18 UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thio... 97 2e-18 UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kin... 97 2e-18 UniRef50_Q9RPF0 Histidine kinase ChrS n=2 Tax=Corynebacterium di... 97 2e-18 UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=De... 97 2e-18 UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinas... 97 2e-18 UniRef50_B8ET68 Integral membrane sensor signal transduction his... 97 2e-18 UniRef50_A9WKI6 ATP-binding region ATPase domain protein n=3 Tax... 96 2e-18 UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Sy... 96 2e-18 UniRef50_C4ZL16 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=... 96 2e-18 UniRef50_B4RWI3 Sensor histidine kinase n=2 Tax=Alteromonas macl... 96 2e-18 UniRef50_Q97F15 Membrane-associated sensory histidine kinase-lik... 96 2e-18 UniRef50_B2J2K6 Integral membrane sensor signal transduction his... 96 3e-18 UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID... 96 3e-18 UniRef50_Q5WK46 Two-component sensor histidine kinase of nitrate... 96 4e-18 UniRef50_C4ZM16 Multi-sensor signal transduction histidine kinas... 96 4e-18 UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 96 4e-18 UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kin... 96 4e-18 UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine... 95 5e-18 UniRef50_C2Z9I7 Integral membrane sensor signal transduction his... 95 5e-18 UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulat... 95 5e-18 UniRef50_B8FDP4 Histidine kinase n=1 Tax=Desulfatibacillum alken... 95 5e-18 UniRef50_C6QDW8 Histidine kinase n=1 Tax=Hyphomicrobium denitrif... 95 5e-18 UniRef50_C3RLD8 Two-component system sensor histidine kinase n=3... 95 5e-18 UniRef50_A5EGA4 Bacteriophytochrome n=13 Tax=Rhizobiales RepID=A... 95 6e-18 UniRef50_A7LKW0 Methanol utilization control sensor n=1 Tax=uncu... 95 6e-18 UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacil... 95 7e-18 UniRef50_UPI00016AFAA4 response regulator/sensory box histidine ... 95 7e-18 UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinas... 95 7e-18 UniRef50_C0Z627 Two-component sensor histidine kinase n=3 Tax=Ba... 95 7e-18 UniRef50_A2SCN1 Two-component sensor histidine kinase-like prote... 95 7e-18 UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=De... 95 7e-18 UniRef50_A5FQU4 PAS/PAC sensor signal transduction histidine kin... 95 8e-18 UniRef50_Q89V76 Two-component sensor histidine kinase n=2 Tax=Br... 95 8e-18 UniRef50_Q251B4 Putative uncharacterized protein n=1 Tax=Desulfi... 95 8e-18 UniRef50_A3CQ91 Histidine kinase, putative n=3 Tax=Streptococcus... 94 8e-18 UniRef50_B2J8K5 Integral membrane sensor signal transduction his... 94 9e-18 UniRef50_UPI0001692C7B sensor histidine kinase n=1 Tax=Paenibaci... 94 9e-18 UniRef50_UPI0001693FB4 two-component sensor histidine kinase of ... 94 1e-17 UniRef50_C7PEC3 Sensor protein n=1 Tax=Chitinophaga pinensis DSM... 94 1e-17 UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafn... 94 1e-17 UniRef50_B5WKH2 PAS/PAC sensor signal transduction histidine kin... 94 1e-17 UniRef50_A1HU07 Integral membrane sensor signal transduction his... 94 1e-17 UniRef50_D1BCA7 Signal transduction histidine kinase n=1 Tax=San... 94 1e-17 UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobac... 94 1e-17 UniRef50_B8EMN3 Integral membrane sensor signal transduction his... 94 1e-17 UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID... 94 1e-17 UniRef50_D1UD43 Histidine kinase n=2 Tax=Burkholderia RepID=D1UD... 94 1e-17 UniRef50_UPI000196C4DE hypothetical protein CATMIT_02034 n=1 Tax... 94 2e-17 UniRef50_Q0G064 Putative uncharacterized protein n=1 Tax=Fulvima... 94 2e-17 UniRef50_B7CDS9 Putative uncharacterized protein n=1 Tax=Eubacte... 94 2e-17 UniRef50_B9TCE7 Sensory transduction histidine kinase, putative ... 94 2e-17 UniRef50_A9BNQ5 Histidine kinase n=1 Tax=Delftia acidovorans SPH... 94 2e-17 UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ... 94 2e-17 UniRef50_Q1IR07 Periplasmic sensor signal transduction histidine... 94 2e-17 UniRef50_B5JFN8 Histidine kinase domain protein n=1 Tax=Verrucom... 94 2e-17 UniRef50_A1WJX0 Response regulator receiver sensor signal transd... 94 2e-17 UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kin... 94 2e-17 UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp.... 93 2e-17 UniRef50_Q0B944 Multi-sensor signal transduction histidine kinas... 93 2e-17 UniRef50_B4WTJ3 Histidine kinase domain protein n=1 Tax=Synechoc... 93 2e-17 UniRef50_Q39TN6 PAS/PAC sensor signal transduction histidine kin... 93 2e-17 UniRef50_Q0BQU7 Two component system histidine kinase n=1 Tax=Gr... 93 2e-17 UniRef50_B3E9K4 Response regulator receiver sensor signal transd... 93 2e-17 UniRef50_A6GNY2 Histidine Kinase n=1 Tax=Limnobacter sp. MED105 ... 93 2e-17 UniRef50_B0UCY8 Integral membrane sensor signal transduction his... 93 3e-17 UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Bu... 93 3e-17 UniRef50_A8H4Y1 Histidine kinase n=2 Tax=Shewanella RepID=A8H4Y1... 93 3e-17 UniRef50_C9RWH5 Integral membrane sensor signal transduction his... 93 3e-17 UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Sy... 93 3e-17 UniRef50_UPI0001AEC81C periplasmic sensor signal transduction hi... 92 3e-17 UniRef50_C6J7D3 ATP-binding region ATPase domain-containing prot... 92 3e-17 UniRef50_Q13QX0 Periplasmic Sensor signal transduction Histidine... 92 3e-17 UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kin... 92 3e-17 UniRef50_A1ASJ6 Multi-sensor signal transduction histidine kinas... 92 4e-17 UniRef50_C1A5E7 Two-component histidine kinase n=1 Tax=Gemmatimo... 92 4e-17 UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 T... 92 4e-17 UniRef50_A5F1R9 Sensor histidine kinase n=52 Tax=Vibrionales Rep... 92 4e-17 UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=... 92 4e-17 UniRef50_A1S6S1 Sensor histidine kinase n=1 Tax=Shewanella amazo... 92 4e-17 UniRef50_Q67QN6 Two-component sensor histidine kinase n=1 Tax=Sy... 92 4e-17 UniRef50_C4ZL69 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=... 92 4e-17 UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX... 92 5e-17 UniRef50_B7L2Y8 Histidine kinase n=1 Tax=Methylobacterium chloro... 92 5e-17 UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kin... 92 5e-17 UniRef50_Q7NNR3 Glr0347 protein n=1 Tax=Gloeobacter violaceus Re... 92 5e-17 UniRef50_A6GQJ7 PAS/PAC sensor signal transduction histidine kin... 92 6e-17 UniRef50_A1K5L6 Putative two-component sensor histidine kinase n... 92 6e-17 UniRef50_C4DDE2 Signal transduction histidine kinase, COG4585 n=... 92 7e-17 UniRef50_A8VSA0 Response regulator receiver protein n=1 Tax=Baci... 91 7e-17 UniRef50_A0LNB4 PAS/PAC sensor signal transduction histidine kin... 91 7e-17 UniRef50_C2DYY1 Two-component system histidine kinase n=8 Tax=La... 91 8e-17 UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella Rep... 91 8e-17 UniRef50_C7TK00 Two component sensor transduction histidine kina... 91 9e-17 UniRef50_Q1J3L3 Periplasmic sensor signal transduction histidine... 91 9e-17 UniRef50_Q47H96 Signal transduction histidine kinase, glucose-6-... 91 9e-17 UniRef50_Q3SGQ9 Histidine Kinase n=1 Tax=Thiobacillus denitrific... 91 1e-16 UniRef50_B1HRK4 Sensor protein n=2 Tax=Bacillaceae RepID=B1HRK4_... 91 1e-16 UniRef50_C4IB15 Two component system histidine kinase n=3 Tax=Cl... 91 1e-16 UniRef50_A0LKW7 PAS/PAC sensor signal transduction histidine kin... 91 1e-16 UniRef50_A1ATT5 PAS/PAC sensor signal transduction histidine kin... 91 1e-16 UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC... 91 1e-16 UniRef50_D2B5X3 Signal transduction histidine kinase-like protei... 91 1e-16 UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=... 91 1e-16 UniRef50_B8CZJ7 Integral membrane sensor signal transduction his... 91 1e-16 UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4... 91 1e-16 UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Br... 91 1e-16 UniRef50_Q220B2 Response regulator receiver sensor signal transd... 90 2e-16 UniRef50_B5WB73 Histidine kinase n=1 Tax=Burkholderia sp. H160 R... 90 2e-16 UniRef50_Q38VV9 Two-component system, sensor histidine kinase n=... 90 2e-16 UniRef50_A9KLX5 Histidine kinase n=1 Tax=Clostridium phytofermen... 90 2e-16 UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kin... 90 2e-16 UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella a... 90 2e-16 UniRef50_A6CZW0 Response regulator receiver:ATP-binding region, ... 90 2e-16 UniRef50_C0QFU9 Two-component protein, sensory box histidine kin... 90 2e-16 UniRef50_B2JK06 Histidine kinase n=22 Tax=Burkholderia RepID=B2J... 90 2e-16 UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter s... 90 2e-16 UniRef50_A4JE38 PAS/PAC sensor signal transduction histidine kin... 90 2e-16 UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinas... 89 3e-16 UniRef50_Q4ZV38 ATP-binding region, ATPase-like:Histidine kinase... 89 3e-16 UniRef50_A0LNC5 PAS/PAC sensor signal transduction histidine kin... 89 3e-16 UniRef50_B6BTE6 Signal transduction histidine kinase, glucose-6-... 89 3e-16 UniRef50_C2ER69 Two-component system histidine kinase n=1 Tax=La... 89 3e-16 UniRef50_C3PKE4 Two-component system histidine kinase n=5 Tax=Co... 89 3e-16 UniRef50_B1LT39 Integral membrane sensor signal transduction his... 89 3e-16 UniRef50_C0EY06 Putative uncharacterized protein n=1 Tax=Eubacte... 89 3e-16 UniRef50_B9XGC5 Response regulator receiver sensor signal transd... 89 3e-16 UniRef50_A1VTB6 Signal transduction histidine kinase, glucose-6-... 89 3e-16 UniRef50_A9B913 Multi-sensor signal transduction histidine kinas... 89 4e-16 UniRef50_Q72LA1 Probable two-component sensor n=1 Tax=Thermus th... 89 4e-16 UniRef50_D1ABJ2 Histidine kinase n=1 Tax=Thermomonospora curvata... 89 4e-16 UniRef50_C9RTT5 PAS/PAC sensor signal transduction histidine kin... 89 5e-16 UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobact... 89 5e-16 UniRef50_C1A9U6 Two-component histidine kinase n=1 Tax=Gemmatimo... 89 5e-16 UniRef50_C8XB57 Histidine kinase n=2 Tax=Actinomycetales RepID=C... 89 5e-16 UniRef50_Q2IIQ9 Periplasmic sensor signal transduction histidine... 88 6e-16 UniRef50_D2BDI0 Histidine kinase n=1 Tax=Streptosporangium roseu... 88 6e-16 UniRef50_Q5NZZ4 Two-component system sensor kinase n=1 Tax=Aroma... 88 6e-16 UniRef50_Q24Z69 Putative uncharacterized protein n=1 Tax=Desulfi... 88 7e-16 UniRef50_C1ZGL0 Signal transduction histidine kinase, COG4585 n=... 88 7e-16 UniRef50_D2PW73 Histidine kinase n=1 Tax=Kribbella flavida DSM 1... 88 7e-16 UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus Re... 88 8e-16 UniRef50_D2BD99 Signal transduction histidine kinase-like protei... 88 8e-16 UniRef50_C7GCL6 Sensor protein DegS n=1 Tax=Roseburia intestinal... 88 8e-16 UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax... 88 8e-16 UniRef50_B2A8K7 Histidine kinase n=1 Tax=Natranaerobius thermoph... 88 9e-16 UniRef50_A8H3C0 Histidine kinase n=2 Tax=Shewanella RepID=A8H3C0... 88 9e-16 UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM... 88 9e-16 UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinas... 88 1e-15 UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidoc... 88 1e-15 UniRef50_C1DEQ8 Periplasmic sensory histidine protein kinase, tw... 88 1e-15 UniRef50_P55183 Sensor histidine kinase yxjM n=1 Tax=Bacillus su... 88 1e-15 UniRef50_Q0KDJ4 Signal transduction histidine kinase containing ... 87 1e-15 UniRef50_A6EM20 Sensor histidine kinase n=1 Tax=unidentified eub... 87 1e-15 UniRef50_UPI0001C314AD GAF sensor signal transduction histidine ... 87 1e-15 UniRef50_A5FMH3 Histidine kinase n=1 Tax=Flavobacterium johnsoni... 87 1e-15 UniRef50_A3WDJ8 Sensor histidine kinase n=1 Tax=Erythrobacter sp... 87 1e-15 UniRef50_C0Q9H3 Sensory box histidine kinase/response regulator ... 87 1e-15 >UniRef50_P09835 Sensor protein uhpB n=121 Tax=Gammaproteobacteria RepID=UHPB_ECOLI Length = 500 Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/500 (100%), Positives = 500/500 (100%) Query: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW Sbjct: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 Query: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT Sbjct: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 Query: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN Sbjct: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 Query: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI Sbjct: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 Query: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET Sbjct: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR Sbjct: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 Query: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE Sbjct: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT Sbjct: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 Query: 481 LHISCLHGTRVSVSLPQRYV 500 LHISCLHGTRVSVSLPQRYV Sbjct: 481 LHISCLHGTRVSVSLPQRYV 500 >UniRef50_A4W4T8 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Enterobacter RepID=A4W4T8_ENT38 Length = 499 Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/498 (84%), Positives = 452/498 (90%), Gaps = 1/498 (0%) Query: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 M FSRL++ +A FFIFSAAWFCLWSISLHLVERP++AVLLFPFGLRLGLMLQCPRGYW Sbjct: 1 MNPFFSRLVSGVASFFIFSAAWFCLWSISLHLVERPELAVLLFPFGLRLGLMLQCPRGYW 60 Query: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 PVLLGAEWLL++WL Q V L H PLL+IG +LTLLPVALISRYRHQRDWRTLL QGAAL Sbjct: 61 PVLLGAEWLLLFWLAQEVALAHLPLLIIGGVLTLLPVALISRYRHQRDWRTLLWQGAALI 120 Query: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 AAALLQSLPW+ +E NA LLTLTGGLTLAP CLV WHYL + W PLGP+LVSQP+N Sbjct: 121 AAALLQSLPWIGQ-QEMLNAFLLTLTGGLTLAPTCLVIWHYLTSTVWQPLGPALVSQPVN 179 Query: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 WR RHL+WYLLLFV+SLWLQLGLP ELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI Sbjct: 180 WRARHLIWYLLLFVVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 239 Query: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 ALIASQTW DHPVDLLLSLL QSLTGLLLGAGIQRLRELNQSLQ ELARN+ LAERL+ET Sbjct: 240 ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQNELARNRRLAERLVET 299 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 EESVR++VARELHDDIGQTITAIRTQAGIVQRLA +N V QSG IEQLSLGVYD+VRR Sbjct: 300 EESVRQEVARELHDDIGQTITAIRTQAGIVQRLAPENGGVIQSGAHIEQLSLGVYDSVRR 359 Query: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 LLGRLRPRQLDDL+L QA+RSLMREMELE RGIVSHL+W IDES LSE QRVTLFRVCQE Sbjct: 360 LLGRLRPRQLDDLSLAQAVRSLMREMELESRGIVSHLDWHIDESTLSEGQRVTLFRVCQE 419 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 GLNNIVKHA+ASAVTL+GWQQDERLML+IEDDG GLPPGSGQQGFGL GMRERVTALGGT Sbjct: 420 GLNNIVKHANASAVTLKGWQQDERLMLLIEDDGCGLPPGSGQQGFGLAGMRERVTALGGT 479 Query: 481 LHISCLHGTRVSVSLPQR 498 L ISC HGTRVSVSLP+R Sbjct: 480 LAISCTHGTRVSVSLPRR 497 >UniRef50_D0M861 Sensor histidine protein kinase UhpB glucose-6-phosphate specific n=18 Tax=Gammaproteobacteria RepID=D0M861_VIBSE Length = 500 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/496 (42%), Positives = 317/496 (63%), Gaps = 9/496 (1%) Query: 9 ITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEW 68 +T I F+ + AWFCLW I+ + V P++A+LLFPF LRLG+ L YWP + +EW Sbjct: 6 VTTICGLFVMACAWFCLWVIAYYFVNDPELAILLFPFALRLGIALHTRTAYWPTIYVSEW 65 Query: 69 LLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR-YRHQRDWRTLLLQGAALTAAALLQS 127 L L + + ++I S+ ++ PV LI++ Y + R L + G + +A + Sbjct: 66 ALTIALATLLEQPQWLTVLIASVASI-PVTLIAKKYYYGDQNRHLAVMGVVIIISAFINV 124 Query: 128 LPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLV 187 + +H + L +++GGL + P+C + W YL + W PL L+S + ++ RH+V Sbjct: 125 MAVGFHVPSVYMVWLASISGGLLVVPMCYLLWSYLFQSRWSPLSSLLLSNAVVFQVRHIV 184 Query: 188 WYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQT 247 Y LL + S+ +Q LP+EL RF PFC+A+PII LA YGWQGAL+AT++N+IALIA+++ Sbjct: 185 LYALLLIGSILVQTSLPEELKRFAPFCMAIPIIVLALRYGWQGALLATMLNSIALIAARS 244 Query: 248 WRDH--PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVR 305 + DLLLSL Q++TG++LG G+Q+ ++LN L+ ELARNQ+L+ +L++ EESVR Sbjct: 245 GVSNLEITDLLLSLSAQTITGIMLGLGVQKQKDLNHKLRGELARNQNLSRQLIKAEESVR 304 Query: 306 RDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRL 365 RD+ARELHD+IGQ ITAIRTQA I++R+ SV +IE LSL VYD +RLL +L Sbjct: 305 RDIARELHDEIGQNITAIRTQANIIKRVNNAETSVG-CADMIEGLSLNVYDTTKRLLSKL 363 Query: 366 RPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNI 425 RP+ LDDL L++++ L REME G L W+ D ++LS+ +VTLFR+CQE LNN Sbjct: 364 RPKMLDDLDLKESVEQLTREMEFANHGTNVQLNWQGDYTSLSDTLKVTLFRLCQESLNNA 423 Query: 426 VKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC 485 K+A+A + ++ + + L+I DDG G +G G+ GM+ERV ALGG + I Sbjct: 424 AKYAEAQLINIELTIGEAAVSLMINDDGVGFKVQDSMKGMGVRGMQERVHALGGKMVIYS 483 Query: 486 LH----GTRVSVSLPQ 497 GT++S++LP+ Sbjct: 484 TSDQVIGTQISITLPK 499 >UniRef50_D0YYF7 Sensor histidine protein kinase UhpB glucose-6-phosphate specific n=10 Tax=Gammaproteobacteria RepID=D0YYF7_LISDA Length = 510 Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/509 (43%), Positives = 313/509 (61%), Gaps = 23/509 (4%) Query: 8 LITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAE 67 ++T I FF+ WFCLW IS + + ++A+L FPF RLG++L P+ YW VL GAE Sbjct: 5 IVTSICSFFLVLCTWFCLWIISSYFIMEAELAILFFPFAFRLGMVLHTPKKYWFVLYGAE 64 Query: 68 WLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRD------WRTLLLQGAALTA 121 W L L + + ++I S+ +L V ++ ++ W L + GA + Sbjct: 65 WFLTISLAILLAQPQWISVLISSIASLPIVWYADKFYLSKEASSATQWYQLSILGAVIGI 124 Query: 122 AALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINW 181 +LL L G S LL+++TGGL + P C + W+YL +W PL ++V+ P+ Sbjct: 125 TSLLNMLIVSHQGVSSGLVLLVSITGGLMIVPSCYLIWNYLFKQSWSPLTANVVAYPVAL 184 Query: 182 RGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIA 241 R RH++ Y ++F++S+ QL LP+EL RF PFCLA+PII LA+ YGWQGAL+ TL+N+IA Sbjct: 185 RARHVIVYAVVFLLSILAQLLLPEELKRFAPFCLAIPIILLAFRYGWQGALLGTLLNSIA 244 Query: 242 LIASQTWRDH--PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE 299 LIA ++ + DL+LSL Q+LTG+LLG G+QR RELN L+ EL RNQ L+ +L++ Sbjct: 245 LIAVRSGVSNIEITDLMLSLSAQTLTGILLGIGVQRQRELNLYLRHELERNQSLSRQLVK 304 Query: 300 TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVR 359 EESVR+++ARELHD+IGQ ITAIR QAGI++R+ ++ +IE LSL VYD + Sbjct: 305 AEESVRKNIARELHDEIGQNITAIRMQAGILKRVETSPMG-EKCASMIEGLSLNVYDTTK 363 Query: 360 RLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES---ALSENQRVTLFR 416 LL +LRP+ LDDL L+ AI L+ EL + L W ++S ++ VTL+R Sbjct: 364 GLLTQLRPKTLDDLGLKAAIEQLI--FELRSHQMSVELNWFPEQSETITFNDETNVTLYR 421 Query: 417 VCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTA 476 +CQE LNNI K+A A+ V L + DE++ L I D+G G +GFGL GMRERV A Sbjct: 422 ICQEALNNIAKYAQATKVVL-NFHFDEQIELSISDNGIGFKQEDTLKGFGLRGMRERVQA 480 Query: 477 LGGTLHISCL--------HGTRVSVSLPQ 497 LGG I+ + GT++ V LPQ Sbjct: 481 LGGEFSITSIPKYSEQIKSGTQLHVRLPQ 509 >UniRef50_A8G803 Integral membrane sensor signal transduction histidine kinase n=50 Tax=Enterobacteriaceae RepID=A8G803_SERP5 Length = 513 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 236/507 (46%), Positives = 327/507 (64%), Gaps = 18/507 (3%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 RLIT +A FFI++ + FCLW I L++ P A+LLFPFGLR+G++LQ P +WP +L Sbjct: 1 MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGIL 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR-----YRHQR---DWRTLLLQG 116 A+ LL+ L G + P L ++ LL V L RHQ +W+ L+QG Sbjct: 61 LADLLLMVVLADQFG--YGPALWASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQG 118 Query: 117 AALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVS 176 A + AALLQ+L W E ALLL L GG T+AP CL+ WHYLA W+PL P L+ Sbjct: 119 AVVAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLLWHYLARQIWVPLEPGLIH 178 Query: 177 QPINWRGRHLVWYLLLFVISLWLQLGL-PDELSRFTPFCLALPIIALAWHYGWQGALIAT 235 +P+ R RHL YLLLF +S+WLQ + EL RF PFCLA+PI+ +++ YGWQGAL+AT Sbjct: 179 KPVTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLAT 238 Query: 236 LMNAIALIASQTWR-DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLA 294 L+N + L+A++ + + DLLLSLL QSLTGLLLGAGIQR RELNQ L+ L N+ LA Sbjct: 239 LLNGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLA 298 Query: 295 ERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGV 354 L+ EE RR+VARELHD++GQTIT IRTQA I++RL A V + I+ L+L V Sbjct: 299 RALVTAEEQTRREVARELHDEVGQTITVIRTQASIIKRL-APQPQVMGCAEAIDTLALRV 357 Query: 355 YDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTL 414 YD V +L +L P L++L L A+ +++RE + +VS ++W++ + L E ++TL Sbjct: 358 YDGVHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVMQWQVPDELLDETLKITL 417 Query: 415 FRVCQEGLNNIVKHADASAVTLQG--WQQDERL---MLVIEDDGSGLPPGSGQQGFGLTG 469 +RVCQEG+ N+ +HA AS + L Q+ RL +L I D+G G+ + G+GL G Sbjct: 418 YRVCQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRG 477 Query: 470 MRERVTALGGTLHISCLHGTRVSVSLP 496 M+ER++ALGG L ++ +GT ++V LP Sbjct: 478 MQERISALGGRLRLTSENGTCLNVILP 504 >UniRef50_Q65Q67 BaeS protein n=5 Tax=Pasteurellaceae RepID=Q65Q67_MANSM Length = 503 Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 210/502 (41%), Positives = 316/502 (62%), Gaps = 15/502 (2%) Query: 8 LITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAE 67 +IT+I +FI A+F +W+IS +L+ +A+L PF LRLG+ L P+ +W V AE Sbjct: 4 IITLIYSWFIMLCAYFSVWAISDYLLGNSLLALLFLPFALRLGINLHTPKIFWLVSYCAE 63 Query: 68 WLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALI-SRYRHQRDWRTLLLQGAALTAAALLQ 126 + ++ L A ++ +I S+ +L PV I +Y + R L +QG +LL Sbjct: 64 FCILSLLMYASPNEYYLPAIILSIASL-PVTFIGQKYYQGNEARKLAVQGVIAVFVSLLN 122 Query: 127 SLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHL 186 + + L +LTG L + P C + + YL W+PL SLV +PI+ R +H+ Sbjct: 123 GIVSFSLSISFFYTFLTSLTGMLLIMPACFLGYDYLFKRKWIPLTASLVHKPISLRAKHI 182 Query: 187 VWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIAS- 245 + Y+LLF++++++Q+ +P+E RF F LA+PII LA+HYGWQGAL+ TL+N+IALIAS Sbjct: 183 LIYILLFLLNIFIQVDIPEEFHRFALFFLAIPIILLAYHYGWQGALLGTLLNSIALIAST 242 Query: 246 -QTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESV 304 R DL LS+ Q++TG+ LG IQR R+LN SL EL RN+ L +L+ TEES+ Sbjct: 243 GSFSRGELTDLFLSISAQTVTGIFLGLAIQRQRDLNNSLMVELNRNRTLTRQLINTEESI 302 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGR 364 R++++RELHD+IGQ ITAIRTQA I++RL + +++ G +IEQLSL +YD + LL R Sbjct: 303 RKEISRELHDEIGQNITAIRTQASIMKRLET-SPKIEKVGSMIEQLSLNIYDTTKGLLNR 361 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA-LSENQRVTLFRVCQEGLN 423 +RP+ LDDL L+QA+++L E++LE GI + L W ++ L Q +TL+R+CQEGLN Sbjct: 362 IRPKMLDDLELQQALQNLFLELDLENHGISTALFWENKQNEPLDHIQEITLYRLCQEGLN 421 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI 483 NIVK++ AS V + + + + L+I+D+G G P + + GFGL GM+ERV L G + Sbjct: 422 NIVKYSHASQVIISVLIRKD-IELIIQDNGDGFNPETVKSGFGLQGMKERVDILCGKFQL 480 Query: 484 SCL--------HGTRVSVSLPQ 497 HGT + ++LP+ Sbjct: 481 ISKERSVSPQQHGTTIKITLPR 502 >UniRef50_C5BB53 Sensor protein UhpB n=2 Tax=Edwardsiella RepID=C5BB53_EDWI9 Length = 510 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 240/502 (47%), Positives = 328/502 (65%), Gaps = 11/502 (2%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 RLI+ IA FF ++ A FCLW+I LV P A+LLFPFGLR+G++LQ P YWP +L Sbjct: 1 MQRLISSIAIFFCYTIAGFCLWAIGAALVTAPVDALLLFPFGLRMGILLQTPHRYWPGIL 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALIS----RYRHQR--DWRTLLLQGAA 118 + + +L+ +G + +G LL + +A S R + Q+ +WR L QGA Sbjct: 61 VGDVAVQLFLSHQLGGGSWLWGTLGGLLLCMALAWASGEWLRRQQQQGAEWRWPLQQGAL 120 Query: 119 LTAAALLQSLPW-LWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQ 177 + AALLQ+L W L G LLL L GGLT+AP CL+ WHYLA WLPL P ++ Sbjct: 121 VALAALLQALSWSLATGTMPGPPLLLGLCGGLTVAPTCLLIWHYLAQQRWLPLTPGILHC 180 Query: 178 PINWRGRHLVWYLLLFVISLWLQ-LGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL 236 P+N R RH+ YLLLF +SLWLQ L +L RF FCLA+PI+ +++ YGWQGAL+ATL Sbjct: 181 PVNLRLRHIGGYLLLFALSLWLQHLAQHADLRRFVLFCLAIPIVFMSYRYGWQGALLATL 240 Query: 237 MNAIALIASQTWRDHP-VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 +N + LIA++ D P DLLLSLL QSLTG+LLGAGI+R R+LN+ L++ LA N+ LA Sbjct: 241 LNGVVLIATEPQGDAPHRDLLLSLLAQSLTGMLLGAGIERQRDLNRQLKQRLAENRSLAR 300 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 L+ +E RR++ARELHD++GQTIT IRTQAGI++RL +D + S + IE +L VY Sbjct: 301 SLVMAQEVTRREIARELHDEVGQTITVIRTQAGIIRRL-SDEPRLLASAEAIENHALRVY 359 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 D V LL +L P L +L L A+ +L+R++ +G + L W ID++AL + ++TL+ Sbjct: 360 DGVHDLLAQLWPASLSNLPLSAALSALLRDLVPPEQGTTARLSWHIDDAALDDTLKITLY 419 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLV-IEDDGSGLPPGSGQQGFGLTGMRERV 474 R+CQEG+ N +HA AS + +QGWQ L+ V I DDG G+ S G+GL G+RER+ Sbjct: 420 RLCQEGVTNACRHARASHIEVQGWQDTGGLLHVNICDDGCGVDTLSLMPGYGLRGLRERI 479 Query: 475 TALGGTLHISCLHGTRVSVSLP 496 A+GG LH+ GTR+ V LP Sbjct: 480 CAMGGELHLESHQGTRLVVILP 501 >UniRef50_A5EZW7 Sensor protein UhpB n=35 Tax=Vibrionaceae RepID=A5EZW7_VIBC3 Length = 527 Score = 254 bits (649), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 183/530 (34%), Positives = 281/530 (53%), Gaps = 52/530 (9%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGL-MLQCPRGYW--- 60 ++L +I F ++S + F LW++S +L P A LLFP GLRL + +L P W Sbjct: 1 MAKLFPLIFAFVLYSISQFSLWNVSQYLSHNPLQAYLLFPTGLRLAVYLLARPTYAWVWL 60 Query: 61 -------------------PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALIS 101 P++L W + WL + H+P L + LL VAL+ Sbjct: 61 LSDMLLAGAILVLLPDQSSPLMLLMPW--VVWLAAVIARQHWPKLHLYWQKLLLIVALVL 118 Query: 102 RYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHY 161 + +L G T L + P + + +LTGG+ L P + Y Sbjct: 119 LHT--------ILVGITFT----LLAKPLHMEAETLITVSIASLTGGIVLTPFLYLVADY 166 Query: 162 LANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIA 221 L + TW PL P L+ + + + L+W LL F + L +L L +++ F + LP I Sbjct: 167 LRHQTWHPLSPQLIHHDVKLKPKMLMWSLLFFSLGLLAELTLLEQMKPFALLIILLPTIF 226 Query: 222 LAWHYGWQGALIATLMNAIALIASQTWR---DHPVDLLLSLLVQSLTGLLLGAGIQR--- 275 LA+ YGWQG ++A+ +N I L ++ + +LL+ + Q+ GL LG I R Sbjct: 227 LAYRYGWQGGVLASSLNCILLATARQFSGSFSSDQELLIFMSSQAFVGLGLGIAISRQHQ 286 Query: 276 ----LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 L+++N L KEL Q LA +L+ EE +R+ VARELHD+IGQ ITAI+ Q+ + + Sbjct: 287 LALLLQKMNTRLAKELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAIQIQSMLAE 346 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 RLA+ N KQ+ ++ L++ ++ + R+LL +LRP LD+L LE AIR L++EM + Sbjct: 347 RLAS-NDQAKQAASSVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLVQEMRFAEQ 405 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 G+ L ++ L + RVTL+R+ QE LNNI KHA A+ V + + E ++L ++D Sbjct: 406 GMTVRLNMGVNPQKLDDTTRVTLYRIVQELLNNICKHAKATRVHISLFPGSE-MVLEVKD 464 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC---LHGTRVSVSLPQR 498 DG GLP +G GL G+ ERV+ALGG L ++ GTR+ V+LP + Sbjct: 465 DGIGLPTDWRVRGQGLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLPTK 514 >UniRef50_A1JTJ3 Sensor protein n=48 Tax=Enterobacteriaceae RepID=A1JTJ3_YERE8 Length = 525 Score = 250 bits (639), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 183/494 (37%), Positives = 262/494 (53%), Gaps = 18/494 (3%) Query: 17 IFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQ 76 FS +W LW+IS +L + AVLL P GLRL LM+ PR YW VLL E + ++WL Sbjct: 16 FFSLSWLALWTISFYLSDDGLHAVLLLPQGLRLALMILLPRRYWSVLLLTECVALWWL-H 74 Query: 77 AVGLTHFPLLMIGSLLTLLPVALISRYRHQRD--WRTLLLQGAALTAAALLQSLPW-LWH 133 + L L+M+ L+LLP L R+ H W+ LLL AA+T ++L L W Sbjct: 75 SEQLQPIVLIMLSPFLSLLPAELTQRFWHHYTLYWQRLLLLLAAVTGNSVLHGLVLGFWL 134 Query: 134 GKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLF 193 LL T TGG+ L P + + YL L + P R L+W L+F Sbjct: 135 PLPLTQTLLATFTGGILLVPFTYLIYEYLKQQHIRNLFSQQMPDP-PLRTSLLIWCSLIF 193 Query: 194 VISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIA----TLMNAIALIASQTWR 249 I + +Q+ + + R + LP + +A+ +GWQG ++A +LM + AS + Sbjct: 194 AIGVCVQIAIAPNMERLLLIFVFLPNVFMAYKFGWQGGVLAAVLGSLMITVTRQASGAFH 253 Query: 250 DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQ-------SLQKELARNQHLAERLLETEE 302 D +L L L Q+L GL LG I R ++L Q L++EL + L +RL+ TEE Sbjct: 254 D-LAELELFLSTQALLGLTLGIAISRQQQLAQHLHRYRNQLEQELQTRRKLMKRLVRTEE 312 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLL 362 VR+++ARELHD+IGQ ITAI+ QA +V R A A+ + Q I LS ++ R+LL Sbjct: 313 DVRKEIARELHDEIGQNITAIQIQAMLVNRSAPSPAAQSAANQ-ISSLSQRIHQTTRQLL 371 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGL 422 +LRP LD++ L+QA+ L E +GI L++ + + TL+R+ QE L Sbjct: 372 RQLRPPVLDEMPLDQALHHLAEEFAFAEQGIHFQLDYALPAPPGEDVVVFTLYRLVQELL 431 Query: 423 NNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLH 482 NNI KHA+A + + D + L + DDG G+P G GL G+ ERV ALGG Sbjct: 432 NNINKHANARNIQVSLHLTDNIITLEVRDDGMGIPVQPQGGGLGLRGIEERVRALGGDWL 491 Query: 483 ISCLHGTRVSVSLP 496 + GTRV V+LP Sbjct: 492 LQRRLGTRVVVNLP 505 >UniRef50_D2TKU9 Two-component system sensor histidine kinase n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TKU9_CITRO Length = 515 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 180/505 (35%), Positives = 277/505 (54%), Gaps = 25/505 (4%) Query: 11 VIACFFIFS--AAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEW 68 VI+ F + + W LW++ +L A L P G+ L L++ R YWP L+ Sbjct: 9 VISLFIVLAWGTGWLMLWTLGFYLTHNGQQAALFLPHGVYLALLILLARRYWPALVLPPM 68 Query: 69 LLIYWL-TQAVGLTHFPLLMIGSLLTLLPVALISRY--RHQRDWRTLLLQGAALTAAALL 125 L++ WL ++ + +L+ L++LLP ++ R+ R W+ L L A+T A+LL Sbjct: 69 LMLLWLRSEQLLSGDLLVLLAAPLVSLLPASIAQRFWQRFPLYWQRLTLLLTAVTVASLL 128 Query: 126 QSL---PWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWR 182 + P L + + L + TGG+ L P + + +L L P R Sbjct: 129 NTALLSPLL--KSPAMLSGLASFTGGVLLTPFVYLIFEFLRQQHRYQLLAQDTQNP-PLR 185 Query: 183 GRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIAL 242 ++W L F+I + QL L EL R + LP + +AW +GWQG ++A L+ ++ + Sbjct: 186 TSLIIWCSLFFIIGIGTQLTLSPELERLLLIVVFLPNVVMAWKFGWQGGVLAGLLGSMMI 245 Query: 243 -IASQTW--RDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSL-------QKELARNQH 292 IA Q + ++L + L Q+L G+ LG I R + L Q+L + ELA + Sbjct: 246 TIARQVGVGFSNLIELEIFLATQALLGMGLGIAISRQQHLAQNLHHYRQRLEAELAARRA 305 Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSL 352 L E+L+ +EE R+ +ARELHD+IGQ ITAI+ Q +V+R A D A + + I L+ Sbjct: 306 LTEKLIHSEEDTRKSLARELHDEIGQNITAIQIQTQLVKR-ARDPAQTQAAASQINDLAR 364 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 ++ + R+LL +LRP LD+L+ +A+ L+ E RGI ++R+ + SE R Sbjct: 365 RIHHSTRQLLRQLRPPALDELSFNEALHHLLNEFAFAERGIRCRFDYRLTATPESETVRF 424 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMR 471 TL+R+ QE LNN+ KHA+AS V + QQ ERL L ++D+G+G+ G GQ GFG+ GMR Sbjct: 425 TLYRLLQELLNNVCKHAEASEVAILLCQQGERLRLEVQDNGTGI--GDGQLPGFGIQGMR 482 Query: 472 ERVTALGGTLHISCLHGTRVSVSLP 496 ERV+ALGG L + HGTRV V+LP Sbjct: 483 ERVSALGGELSLESRHGTRVIVNLP 507 >UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H4_9GAMM Length = 570 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 142/267 (53%), Gaps = 32/267 (11%) Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLL-----ETEESVRRD 307 VDLLLS + S + I LR++ + Q E ARNQ RLL E +E+ RR Sbjct: 306 VDLLLSTVPLSDNEDRVIGLICTLRDITELKQAEAARNQLRETRLLAKHMDEAQEAERRH 365 Query: 308 VARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 +ARELHD++GQ +TAI+T A +++ R V S Q I + +YD V ++ RLR Sbjct: 366 LARELHDELGQCLTAIKTDAVLIRNRTETTEPRVFNSAQAIIDTASHIYDVVHNMITRLR 425 Query: 367 PRQLDDL----TLEQAI-----RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 P LDDL TLEQ I R +L+ G +++ L+E +T+FRV Sbjct: 426 PSPLDDLGLVPTLEQCIASWQSRETTINFQLDVNGTLNN---------LNEIMNMTVFRV 476 Query: 418 CQEGLNNIVKHADAS----AVTLQGWQQDERLMLVIEDDGSGL--PPGSGQQGFGLTGMR 471 QE + N V+HADAS V+ + +D++L++ I+D+G G+ FGL GMR Sbjct: 477 VQEAITNAVRHADASEIKVKVSAEQGSEDDKLIIDIQDNGKGMVVKDFHSDVDFGLLGMR 536 Query: 472 ERVTALGGTLHISCL--HGTRVSVSLP 496 ER +LGG ++ G R+ +++P Sbjct: 537 ERAQSLGGKFELNSEPGAGVRILITIP 563 >UniRef50_Q1H355 Sensor protein n=3 Tax=Methylophilaceae RepID=Q1H355_METFK Length = 466 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 19/261 (7%) Query: 252 PVDLLLSLLVQSLTGLLLG----------AGIQR-LRELNQSLQKELARNQHLAERLLET 300 PVD +++ L + G L AGI R + ++L+ + N L ++L+ Sbjct: 200 PVDSVMTALNELERGNLKARLPDFELPELAGISRKFNAMAETLETSIQNNHKLTQQLIRL 259 Query: 301 EESVRRDVARELHDDIGQTITAIRTQA-GIVQRLAADNASVKQSGQLIEQLSLGVYDAVR 359 +E R+++AR+LHD+IGQ +TA+ A I+ + +NA K+S + I ++ + D V Sbjct: 260 QEDERKNLARDLHDEIGQYLTAVHVDASAILNAKSIENA--KESAKAISAVARQMMDIVH 317 Query: 360 RLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE--WRIDESALSENQRVTLFRV 417 +L RLRP LD L A++ L+ + + + H++ R+D+ E + ++R+ Sbjct: 318 DMLQRLRPSGLDAFGLSTALKDLVSTWKQRNQQVDVHVDIPGRLDD-IRDETTAIAVYRI 376 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTAL 477 QE L N+ +H++AS V ++ + L + +ED+G G GFGL GMRERV L Sbjct: 377 VQECLTNVTRHSNASRVDIRITIEKTMLNITVEDNGRGFNTAQLPSGFGLAGMRERVEGL 436 Query: 478 GG--TLHISCLHGTRVSVSLP 496 GG +L + GTRV+V LP Sbjct: 437 GGRFSLDSALAAGTRVNVELP 457 >UniRef50_C0N6J6 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6J6_9GAMM Length = 479 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 123/223 (55%), Gaps = 17/223 (7%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 R + L K +A N LA +L +ES RRD+ARELHD++ + IR G ++RLA Sbjct: 216 RFNHMASVLDKTMAENHALAGNMLSLQESERRDLARELHDELAPCLFGIRVDLGEIERLA 275 Query: 335 ADN--ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM-----REME 387 + ++ ++ ++ + VR++L RLRP LDDL L +A+R ++ R+ E Sbjct: 276 GERQITEIEDKVGSVKTITTHIQSLVRKMLSRLRPMTLDDLGLAEALRDMLHNWRDRQPE 335 Query: 388 LEGRGIVSHLEWRI--DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 ++ EW D L + +VT++RV QE N V+HA AS V ++ +++E + Sbjct: 336 ID-------WEWDFVGDFYDLPDTLQVTVYRVVQECTTNCVRHAKASHVKVEVRREEETI 388 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHG 488 + + DDG GL + +GFGL GMRERV+ALGG + G Sbjct: 389 KVAVTDDGKGL-DANLVRGFGLIGMRERVSALGGRIAFDTEEG 430 >UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FQ9_DECAR Length = 373 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 119/228 (52%), Gaps = 10/228 (4%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 ++LR+ + L+ R Q LA L E R +ARELHD++GQ +TA+R + R Sbjct: 144 EQLRQSSDELRASRERLQELAAFLQSVREEERTAIARELHDELGQALTALRIDLAWINRQ 203 Query: 334 AAD-----NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 A S ++E+ DAVRR+ LRP LD L L AI L+ + Sbjct: 204 CKTLGPEVQARADASCAIVER----TIDAVRRISEGLRPGMLDVLGLTAAIEYLVEQF-A 258 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + I +L DE A+ + + +FR+ QE L N+V+HA A+ V + Q + + + Sbjct: 259 KRNDIPCYLTSDRDEFAIDDRVSIAVFRLIQEALTNVVRHASATRVDITLSQDNNTICVD 318 Query: 449 IEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 I D+G GL G +QGFGL GMRERVT LGGT+ I GTR+ P Sbjct: 319 IRDNGIGLATGEPKQGFGLLGMRERVTMLGGTIDIDGSRGTRILARFP 366 >UniRef50_B1Y7S0 Histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7S0_LEPCP Length = 490 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 120/219 (54%), Gaps = 6/219 (2%) Query: 284 QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQ 342 Q+ LA ++ +A ++ E RR++ARELHD++GQ++TAIR+ A +V RL +A+ ++ Sbjct: 258 QRTLAESREIARQIEHHTEHERREMARELHDELGQSVTAIRSVANSLVHRLGERDAAGRE 317 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 LI + +Y+ + L+ RL P LD L L A+ L+ L + Sbjct: 318 MAALISSEAARLYEVMHGLIPRLTPLALDSLGLADALADLVGGARQRPGSPQIDLNTQAL 377 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 + L + +RV QE LNN ++H+ A+ + + D L + +EDDG+GLPP + Sbjct: 378 PAGLDAELALAAYRVVQEALNNALRHSGAARIDIAASADDTGLQITVEDDGAGLPPDWQR 437 Query: 463 QG-FGLTGMRERVTALGGTLHISCL----HGTRVSVSLP 496 G +GL G+RER+ LGG L I L G RVS SLP Sbjct: 438 PGHYGLRGLRERLRGLGGELQIEGLAAPRSGVRVSASLP 476 >UniRef50_C6XAP9 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAP9_METSD Length = 446 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 120/233 (51%), Gaps = 6/233 (2%) Query: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 + A I ++ + L N L + LE +E RR +AR+LHDD+GQ + AI+ A Sbjct: 208 VFAADITEIKTAESEISNLLRENHFLLRQALELQEEERRHIARDLHDDMGQYLNAIKANA 267 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + + S+ + I S +Y + R+L+ RLRP LD+L L A++ L+ + Sbjct: 268 TSLVNMPDLPPSISEVALHIISHSDHIYRSARQLIHRLRPAALDELGLGAALQHLIDTWK 327 Query: 388 LEGRGIVSHLEWRIDES--ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 G + + ID++ L + + ++RV QE + N +HA AS + + + Q +RL Sbjct: 328 YPANG--TRYQLAIDDALDHLDDKLTINIYRVIQEAITNAARHAQASLIDVHLFMQGDRL 385 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 ++ I DDG G+ +G GL GMRER+ A+ G +S GTR+ +P Sbjct: 386 IVDITDDGCGISQAQPHKGLGLAGMRERIKAVDGKFEVSSAAGTGTRIRAVIP 438 >UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinase n=2 Tax=Methylophilaceae RepID=Q1H0K4_METFK Length = 573 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 25/295 (8%) Query: 225 HYGWQGALIATLMNAIALI----ASQTWRDHP---VDLLLSLLVQSLTGLLLGAGIQRLR 277 H G Q A M+A L+ + RD V L ++ L+ +G L+G I +R Sbjct: 280 HEGEQERSSAASMSANGLVEHYDTQRVARDGKLLDVSLSIAPLMDPKSGELIGE-ICSMR 338 Query: 278 ELNQ-SLQKELARN-------QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA-G 328 ++ + L +E AR HL +R +E E RR +ARELHD++GQ +TAI+T A Sbjct: 339 DITERKLAEETARKLEENRQLTHLIQRHIEDE---RRSLARELHDELGQYVTAIKTFAVA 395 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 I + + S++ S Q I + +YD + ++ LRP LD+L L +A+R + + Sbjct: 396 IANKAKQEMPSIESSAQTIVSAANHIYDGMHNIIRHLRPGSLDNLGLSEALRDAVAGWQA 455 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ-GWQQDERLML 447 + + +LE + L E+ + L+R+ QE + N ++HA A + ++ ++ L L Sbjct: 456 QNSNVTFNLELQGKLDLLGESLNINLYRIVQESVTNALRHAQADRIDIRLSRDENGNLTL 515 Query: 448 VIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 +I+D+G G+ + Q FGL GMRERV AL G I GT ++V++P+R Sbjct: 516 LIKDNGIGMNMCNVDQNRHFGLLGMRERVQALYGNFAIDSQPGQGTAITVTIPER 570 >UniRef50_Q0A524 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A524_ALHEH Length = 486 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 110/216 (50%), Gaps = 3/216 (1%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 + + SL R Q L RL + +E+ R +ARELHD++GQ + AIR A I+ Sbjct: 214 RHFNSMADSLATSHQRIQRLNRRLFDVQEAERHTLARELHDELGQCLVAIRADAMIIANA 273 Query: 334 A-ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 A A+V+ S I Q + VY RR++GRL P L+ L L A+R + + Sbjct: 274 PDAPPANVRASADAIRQTAGHVYQLTRRIMGRLHPAALEQLGLGPALRQMAGDWARRHPD 333 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I +E + L +Q + L+RV QEGL N+ KHA A V L+ + E L LVI DD Sbjct: 334 IAVAMEIQDTPRGLPPSQAIHLYRVVQEGLTNVTKHAHARRVRLRLRDRGEHLWLVIGDD 393 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHG 488 G GL G GL GM ER+ LGG L C G Sbjct: 394 GHGLGTRRDGDGMGLMGMAERIQGLGGRL--RCFSG 427 >UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIL1_ACIBL Length = 552 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 124/228 (54%), Gaps = 12/228 (5%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 + ++L++ AR L+ LL +E R+ ++RELHD+ GQ + IR G+++ Sbjct: 300 MTEALREREARIAELSGYLLRAQEEERKRISRELHDETGQALMVIRLYLGMLEATVTTRT 359 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 + + + +E + + + +RR++GRL P L +L L AIR +++ + G+ + + Sbjct: 360 AKTKIHETLEVVDRTI-EGIRRIIGRLSPLVLQELGLIAAIRKEAKDL-AKSAGVKAKVS 417 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-- 456 + LS ++RV QE L+N+ KHA A+ VT+Q + + L IEDDG G+ Sbjct: 418 VGDNVGRLSPVTETAVYRVVQEALHNVAKHAHATTVTIQLRRDGGLVKLCIEDDGVGIKQ 477 Query: 457 --PPGSGQQGFGLTGMRERVTALGGTLHISCLH------GTRVSVSLP 496 P G++ FGL GMRER+T L GTL + GTR+ V++P Sbjct: 478 SQKPNPGRRSFGLAGMRERITTLEGTLKVGPASRNDEGAGTRIEVTVP 525 >UniRef50_C6WWI1 Histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWI1_METML Length = 456 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 37/258 (14%) Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 L+ + +SLT +RL E N+ L HL ++ +E E RR +ARELHD++ Sbjct: 212 LNRMAESLTA-------ERLLEENRQLT-------HLIQKHIEDE---RRSLARELHDEL 254 Query: 317 GQTITAIRTQAGIVQRLAADNAS------VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQL 370 GQ +TAI+T A + A N+S + S Q+I + +YD + ++ +LRP L Sbjct: 255 GQYVTAIKTFAVSIANKAKANSSGAGMTEIASSAQVIVSAANQIYDGMHNIVRQLRPGAL 314 Query: 371 DDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES-------ALSENQRVTLFRVCQEGLN 423 D+L L + ++ L+ +++ + +++ + E+ +L E + L+R+ QE LN Sbjct: 315 DNLGLAETLKDLVSSHQVQHPKL--NIQLYLSENLQSGNLQSLGETISINLYRIVQESLN 372 Query: 424 NIVKHADASAVTLQGWQ-QDERLMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGT 480 N +K+A+A+ + ++ + D L L I+DDG G+ G+ Q FGL GMRERV AL GT Sbjct: 373 NALKYAEAATIEIRLVKMSDGELQLSIKDDGVGMDIGAVDQSSHFGLLGMRERVQALHGT 432 Query: 481 LHISCL--HGTRVSVSLP 496 I GT +++ +P Sbjct: 433 FAIESAPKQGTTITIRVP 450 >UniRef50_Q1H352 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H352_METFK Length = 466 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 9/240 (3%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 Q++ G Q L E + L L NQ LA ++ +E RR++ARE+HD++GQ +T Sbjct: 220 QNIYGFFADITEQHLAE--RELAVLLKENQALARHAMQVQEEERRNIAREIHDEMGQYLT 277 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 AIR + + + ++ + + I + AVR L+ RLRP LD L +AI Sbjct: 278 AIRLELASLPK--EGHSFIGEFSARINSHVEHIQQAVRGLIHRLRPTALDAHGLAEAIEQ 335 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 L+ E + + I L +L E + +R+ QE L NI +HA A+ V ++ + Sbjct: 336 LVNEWKRQHPAIECQLMLDKHYPSLPEKTSIVAYRIVQESLTNIARHAYANRVAIRLIRT 395 Query: 442 ----DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLP 496 + L + ++DDG G P + GFGL+GMRERV A GGT +I S G +S +LP Sbjct: 396 HGILSDILTVEVQDDGVGFNPHLPRAGFGLSGMRERVEAEGGTFNIRSERKGVVISATLP 455 >UniRef50_UPI0001AEBEC0 2-keto-4-pentenoate hydratase, putative n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBEC0 Length = 521 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 121/499 (24%), Positives = 210/499 (42%), Gaps = 70/499 (14%) Query: 44 PFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSL------LTLLPV 97 P G+RL L P WP+LL AE + L G+ + G++ L L P Sbjct: 44 PAGVRLAAFLLLPIYSWPLLLIAEKSTHFILFHPGGILDNTAFLSGTIGWYLVHLVLSPA 103 Query: 98 ALIS-----RYRHQRDW-----RTL------LLQGAALTAAALLQSLPWLWHGKESWNAL 141 + + R R + TL +L AL A L + L G E + ++ Sbjct: 104 VICTCVYLFRRRFSAPYIDNVSSTLATLAFGVLISVALGAVFLGRRAIELQTGIEVFLSI 163 Query: 142 LLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQL 201 L + G + + L P +L +P + HLV YL WL L Sbjct: 164 LFDFSLGDFVGIVVLC-----------PFLFALYKRP-SIPKSHLVLYLTTIA---WLVL 208 Query: 202 GLPDELSRF--------TPFCLALPIIALAWHYGWQGALIATLMNAIA--LIASQTWRDH 251 + + F + P + L++ Y G+ + L+ I ++ASQ+ Sbjct: 209 LMLSSYAYFQQINISYQVKYLAVFPALFLSYRYAIVGSAFSCLLIGITAFVVASQSALP- 267 Query: 252 PVDLLLSLLVQSLTGLLLGAGIQ-------RLRELNQSLQKELARNQHLAERLLETEESV 304 P++ +L + L+LGA I +L + N+ L+ + Q LA +L+ +E Sbjct: 268 PIEHQFYILASCTSCLILGASINQSTLLNMKLAKKNEDLEVSVQSAQALASQLVVVQEDE 327 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGR 364 R+ ++R+LHDD G I ++ Q + R + ++ + + L Y A+++ LG Sbjct: 328 RKRLSRDLHDDFGHRIVDLKLQLSLDSRESDNDMMLNKIDAL--------YHAMKKSLGG 379 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 LRP +D L +E I+ L+ I +Q++ ++R+ QE + N Sbjct: 380 LRPSGIDTLPIESVIQRSEIITTLKRANINYSFNVSGTPVPFDSDQKIHIYRIVQEAVTN 439 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP-----GSGQQGFGLTGMRERVTALGG 479 +K+A+A+++++ + ++ DDG G+P + + GL MRER + G Sbjct: 440 SIKYANATSLSIDINYAQHSAVFIVTDDGGGIPEHIAQLANAEPTLGLLSMRERAKLING 499 Query: 480 TLHISCLH--GTRVSVSLP 496 IS GTRV ++LP Sbjct: 500 EFDISQNKPTGTRVCLTLP 518 >UniRef50_C7RKP8 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP8_9PROT Length = 595 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 123/221 (55%), Gaps = 16/221 (7%) Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR-LAADNASVKQSGQ 345 L +N L +L++T+E R +ARELHD++ Q +TAIR A +QR A + + + + Sbjct: 378 LDQNTRLVRQLMDTQERERVALARELHDELAQHLTAIRAFAAAIQRDKATPHERILAAAR 437 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS-HLEWRIDES 404 I+ + +Y+ RL+ L P LD + +A+ SL L G G +EWR + Sbjct: 438 AIDVSARDIYEVSHRLMEGLHPSILDAGCISEAVGSL-----LAGWGQQHPEIEWRASLA 492 Query: 405 A---LSENQRVTLFRVCQEGLNNIVKHADASAVTL----QGWQQDERLMLVIEDDGSGLP 457 A +R+ ++R+ QE L+NIV+HA A V + + RL LVI DDG G+ Sbjct: 493 AGLMCDGPRRLAIYRIVQECLSNIVRHARAERVRIVLATRRGPDGGRLRLVIRDDGIGMD 552 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 G+ Q GFGL GMRERV +LGG+L IS GTRV V LP Sbjct: 553 VGAAQTGFGLLGMRERVLSLGGSLQISSGRGAGTRVRVLLP 593 >UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR1_THEYD Length = 726 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 131/234 (55%), Gaps = 6/234 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 +G I +++ + L+K + L+ L E+ R+++A+E+HD++GQ++TA++ Sbjct: 492 IGRDITYRKQIEEELRKSREALRKLSVYLQNIRENERKEIAKEIHDELGQSLTALKLSLS 551 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +++ D K+ + + ++ + V+ + RLRP +D LTLE AI ++E E Sbjct: 552 WIKKRVEDEFLNKKFDETLTIVN-ALIKQVQNISNRLRPSLIDYLTLEDAIMWQVKEFE- 609 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 IV +++ LS+N +TLFR+ QE L NI +HA+A+ V ++ ++ + ++L+ Sbjct: 610 RNTSIVCNVDIAEHGIKLSKNVSLTLFRIFQEALTNIARHANATEVDIKMFRSEASILLI 669 Query: 449 IEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTL--HISCLHGTRVSVSLPQR 498 I+D+G G+ + FGL MRER ++ TL H S GT + +S+P R Sbjct: 670 IKDNGIGISDEKIKSPESFGLMAMRERAYSINATLDIHRSYEGGTEIIISVPVR 723 >UniRef50_A1VQL5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQL5_POLNA Length = 468 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 115/222 (51%), Gaps = 7/222 (3%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAADN 337 L LQK +A +HLA+RLL E RR +ARELHD+ GQ +T+I +A I R Sbjct: 236 LTGRLQKTMAEQRHLAQRLLAVREEERRCLARELHDEFGQCLTSIGAEAAFITARARERQ 295 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR--EMELEGRGIVS 395 + + Q I ++ + ++++ +L +LRP LD L + L+ + L G Sbjct: 296 PELLPATQSIASVTAHMMESLQGILCQLRPVGLDAFGLRAGLEQLLGGWQRRLTGCSFEL 355 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 +E ID+ L + V+L+R+ QE L N ++HA VT++ ++ R +L +EDDG Sbjct: 356 FIEGEIDD--LPGDLTVSLYRIVQESLTNALRHAAPRKVTVRLRREAARCLLSVEDDGEK 413 Query: 456 LPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSL 495 P + G G+ GM ERV ALGG I L G RV Sbjct: 414 REPSTAGSGLGVLGMNERVAALGGRFAIEALSPQGMRVHAEF 455 >UniRef50_Q7X326 Putative sensory transduction histidine kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X326_9BACT Length = 454 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 86/254 (33%), Positives = 139/254 (54%), Gaps = 15/254 (5%) Query: 256 LLSLLVQSLT-GLLLG-AGIQRLR--ELNQSLQKELARN-----QHLAERLLETEESVRR 306 LL +L QSL+ GL++ + RLR E Q+ +A + + L+++L+ T+E R+ Sbjct: 187 LLRMLGQSLSLGLIVALVAVYRLRVLEKRSDQQRVVAEDAERQMRQLSQQLVATQEDERK 246 Query: 307 DVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSL--GVYDAVRRLLGR 364 +++RELHD +GQ +TA+R + G ++R+ A A + +IE +L ++ VR L Sbjct: 247 NLSRELHDHVGQVLTALRMEIGRIERMRA-PADARLGAAVIECKTLVDDMFRTVRNLALG 305 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 LRP LDD L+ A+ +R++ G+ L D AL + R ++R QE L N Sbjct: 306 LRPSMLDDFGLQAALEWHVRDL-ASRYGVDVELTMTGDFDALPDRYRTCVYRAVQEALTN 364 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHIS 484 V+HA A ++T+ E+L + DDG GL + G GL G+ ERV L G++ I Sbjct: 365 CVRHASARSITVTVTSNGEQLEAFVADDGVGLDQSRRRNGLGLRGIEERVRDLNGSMTID 424 Query: 485 CL--HGTRVSVSLP 496 L GT++++ LP Sbjct: 425 ALSGKGTKLAIRLP 438 >UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAR1_METSD Length = 465 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 43/242 (17%) Query: 280 NQSLQKELARNQ--HLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAAD 336 N+ L+ E +R + L+ L + +E RR +ARE+HDD+G +TAI+ I++R+ D Sbjct: 240 NEKLEIERSRQRMAELSAHLTQVKEQERRRIAREIHDDLGGNLTAIKIGLTSIIKRINPD 299 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 + + +E + +D V R+ LRP D L L GIV+ Sbjct: 300 EPKLVEKALNLESIVDRTFDIVHRIASDLRP---DVLEL----------------GIVAA 340 Query: 397 LEWRI-----------------DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 LEW+ E A+S ++ +TLFR+CQE ++NI KHA A V ++ Sbjct: 341 LEWQCGQFEKQFSLPCRFYSSQTELAVSADEAITLFRICQEAMSNIAKHARARQVEVELL 400 Query: 440 QQDERLMLVIEDDGSG--LPPGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSL 495 +D +ML I DDG G + FGL GMRERV AL G+L + GT V V + Sbjct: 401 VEDRDIMLRIVDDGQGIRMQDQHKANSFGLRGMRERVAALDGSLEVEKRVRGGTAVQVKI 460 Query: 496 PQ 497 P+ Sbjct: 461 PR 462 >UniRef50_UPI0000E0F7D9 sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F7D9 Length = 542 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/330 (24%), Positives = 150/330 (45%), Gaps = 23/330 (6%) Query: 190 LLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWR 249 L++ I L L EL + L +P++ + Y W G T++ I Sbjct: 212 LIMITILTILTLFYGGELVHYLSIYLVIPVVWFCYRYRWWGMSSFTIVINFFTIMFAISN 271 Query: 250 DHPV---------DLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKE----LARNQHLAE- 295 H DL+ LL +L L + A + L E+ + +K ARN L E Sbjct: 272 SHFFNIDTNISYDDLIWFLLALNLFSLYINAMVFELDEIKRVNRKNQVLMTARNADLIEV 331 Query: 296 ---------RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQL 346 L+ +E R+ ++R+L +G+ I A++ +++ A+ + Sbjct: 332 NTQIKELNRHLISAQEKQRQQLSRQLEKLMGENINALQQSITVLEMRASFSQKENNPYYA 391 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 I++ + +Y +V L+ LRP L+ L L + S + + L I E + + + Sbjct: 392 IKKFTNIIYLSVYELVNWLRPETLERLGLINTLNSKLFKDALALNNIRYEFELIGEHAEI 451 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFG 466 ++ + LFRV QE ++N +KH+ A+ T++ D L L IEDDG+G + ++GFG Sbjct: 452 ADEIALPLFRVIQESVSNAIKHSKANTFTVKCQFNDSHLQLWIEDDGNGFDSDNVKRGFG 511 Query: 467 LTGMRERVTALGGTLHISCLHGTRVSVSLP 496 L+ M+ R+ A+ G ++ +G + ++ P Sbjct: 512 LSSMKSRIEAINGEFSMTSTNGVSIYINTP 541 >UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG9_SYMTH Length = 558 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 86/233 (36%), Positives = 121/233 (51%), Gaps = 5/233 (2%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G +G I R R +Q +KE R + LA L+ +E RR +ARELHD+IGQ +TA+ Sbjct: 299 GEQIGLAIDRARLYDQLAEKERLRGRLLAR-LITAQEDERRRIARELHDEIGQALTALVV 357 Query: 326 QAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 + R ++Q +++++ VRR++ +RP LDDL LE AIR L+R Sbjct: 358 TLDFLVRHPLSEEMLRQRLVAVKEMAETGLTEVRRVIHEMRPTALDDLGLEAAIRWLVRR 417 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 E G I +E E L + +T+FR+ QE N VKHA AS + + + L Sbjct: 418 YEDAGLKIDVQIEGL--EERLPDYIEITVFRLIQEACTNTVKHAAASHIRIALRHRGNWL 475 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 + + DDG G +G GLTG+RERV+ GG L I GTRV LP Sbjct: 476 TVEVTDDGKGFDIKRRGEGVGLTGIRERVSLAGGKLTIESGPDSGTRVYAELP 528 >UniRef50_B2ID99 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2ID99_BEII9 Length = 560 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 27/247 (10%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT-------QAG 328 +L +L++ HL +RL+ +ES R+++ARELHD+ G + IR A Sbjct: 297 FNQLAATLERSEVDKHHLIDRLISVQESERKELARELHDEYGAALFGIRAATSCILDSAH 356 Query: 329 IVQRL-AADNASVKQ---SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 +QR +N ++++ Q I QL+ + RR+L R+RP L + L +A+R L+ Sbjct: 357 ALQRPEPGENQNIQEISERAQAISQLADTIQKQNRRILERIRPAVLHRMGLPEALRHLVE 416 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHAD------------AS 432 + + +G L +D ++ E +T +R+ QE L NI +H+ AS Sbjct: 417 DWQTHHKGFSCALTLAVDSASFDEEVSLTFYRLVQECLTNIARHSQARSARITLALVAAS 476 Query: 433 AVTLQGWQQD-ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGT 489 A +G + + L L IEDDG GLPP S + GFG GM ERV L G L I HGT Sbjct: 477 AHPEEGVSEPGQNLCLRIEDDGIGLPP-SFRFGFGFLGMSERVRKLAGCLRIENALPHGT 535 Query: 490 RVSVSLP 496 + +P Sbjct: 536 LIEALIP 542 >UniRef50_A6T1A4 Signal transduction histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6T1A4_JANMA Length = 678 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 4/204 (1%) Query: 300 TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVR 359 T E +R +ARELHDD+G +TA+ ++ + + I+ L + DA R Sbjct: 456 TREEEKRSIARELHDDLGSALTALNMHLSLLFQQMPPEPKFTERSLKIKALLSSITDATR 515 Query: 360 RLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQ 419 R+ LRP +LD ++ AI E E + G+ + D + + LFR+ Q Sbjct: 516 RIQNGLRPDKLDVFGVKVAIAEQAAEFE-KYTGVTCNASLPDDRLIYAPRVDIALFRMVQ 574 Query: 420 EGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG-SGQQGFGLTGMRERVTALG 478 E LNNI KHA A+ V + ++ ++L I D+G G+P SG GL GMRER LG Sbjct: 575 ESLNNIAKHAQATHVDVVLDDTEDEILLTIRDNGVGMPTAQSGVMTHGLRGMRERAGYLG 634 Query: 479 GTLHISCL--HGTRVSVSLPQRYV 500 G++ ++ + GT +++S+P+ V Sbjct: 635 GSVQVTSVVGRGTTIAISIPKTAV 658 >UniRef50_C2FSZ8 Possible sensor kinase of Zn/Pb responsive two-component regulatory system n=2 Tax=Sphingobacterium spiritivorum RepID=C2FSZ8_9SPHI Length = 625 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 139/260 (53%), Gaps = 26/260 (10%) Query: 258 SLLVQSLTGLLLGAGI----------QR---LRELNQSLQKELARNQ-HLAERLLETEES 303 S + + TGL++G + QR L++ + LQ+E A+ + L + + +E Sbjct: 370 SFYLFNTTGLVIGLTVEIVFLSFALTQRYNFLKKETRILQQEKAKLEIALVDDVFAVQEK 429 Query: 304 VRRDVARELHDDIGQTITAIR-----TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAV 358 R +AR+LHDD+G T++AI+ +A IV+ +A +Q+ ++IE +++ Sbjct: 430 ERIRLARDLHDDLGGTLSAIKLNVTAFKANIVKSPDEIHAFYQQTIRMIETAC----ESL 485 Query: 359 RRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVC 418 R + L P+ LD+ L + + E+ G I I + L E + +TL+R+ Sbjct: 486 REISHNLMPKTLDEKGLTHTLSEQLTELNQSGH-ITFEFVHEIGRAILPETE-LTLYRIM 543 Query: 419 QEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALG 478 +E +NN+V+H+ A+ +LQ DE ++++ ED+G+G GS G GL+ +R R+ L Sbjct: 544 KELINNVVRHSAATKASLQIISTDEHIIVMCEDNGTGFDTGSTPAGIGLSNIRLRINHLN 603 Query: 479 GTLHI-SCLHGTRVSVSLPQ 497 GTL++ S GT +S+ +P Sbjct: 604 GTLNLESNEKGTSISIFIPH 623 >UniRef50_C0N7Q8 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q8_9GAMM Length = 457 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 113/223 (50%), Gaps = 10/223 (4%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT-QAGIVQRLAADNASV 340 S + LA NQ LA +L+ +E R ++RELHD+ GQ + I I Q + ++ Sbjct: 225 SQEATLAENQRLALKLMNAQEEEHRYISRELHDEFGQCLAGINAVTTSIAQTAKKECPAL 284 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS---HL 397 I ++ + A+R LL RLRP +DDL L +++ L+R H+ Sbjct: 285 LDEVNSISHITAHMMTALRNLLTRLRPADVDDLGLSSSLQQLIRSWNKRSGDQTQYQIHI 344 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ-GWQQDERLMLVIEDDGSGL 456 + R+D L E V L+R+ QE L NI KHA AS ++ + + + + L+I DDG Sbjct: 345 DNRVDN--LPEPLPVNLYRIVQECLTNIAKHARASKADIKLTYAKADEITLIIRDDGIAE 402 Query: 457 PPG-SGQQGFGLTGMRERVTALGG--TLHISCLHGTRVSVSLP 496 + G GL G+ ERVTALGG TLH G V++ LP Sbjct: 403 ADSFTNTMGIGLLGIHERVTALGGQFTLHTEQTGGLVVAIRLP 445 >UniRef50_Q01NC5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC5_SOLUE Length = 437 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 114/214 (53%), Gaps = 14/214 (6%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL--AADNASVKQSGQLIE 348 +HL+ RL+E +E RR ++RELHD++GQ++T + + + +L D SV I+ Sbjct: 224 KHLSARLVEAQEDERRSISRELHDEVGQSLTGVLLEMANLSKLIRTRDPESVAAKAAEIK 283 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSE 408 + VR + LRP LDDL L A++ RE+ S L +D +++SE Sbjct: 284 REVENSIGVVRNMALLLRPSMLDDLGLVPALQWQAREVSKR-----SGLWVSVDAASVSE 338 Query: 409 N----QRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG 464 + + ++R+ QE L+N V+HA A V + QQ + L L IEDDG G G +G Sbjct: 339 DLPEEHKTCIYRIVQEALHNAVQHAGARHVKVAVEQQPDELRLAIEDDGKGFDAQQG-RG 397 Query: 465 FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 GL G++ERV LGG + GT + V+LP Sbjct: 398 MGLLGIQERVGYLGGKFEVGSAPGKGTALKVTLP 431 >UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Labrenzia RepID=A0NNP2_9RHOB Length = 453 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 115/215 (53%), Gaps = 16/215 (7%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK-QSGQLIEQ 349 + L R+ + +E R+ V+ ELHD I Q + ++R ++ A ++ Q+ + ++ Sbjct: 237 KELTNRIFQVQEQERKRVSTELHDSISQLLVSVRYGVEMIHSEANREPELQAQAAKCLKT 296 Query: 350 LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSEN 409 L G VRR+ LRP LDD+ L A+ SL +E + + GI +++ S LSE Sbjct: 297 LD-GTIAEVRRISRDLRPSVLDDMGLAAALGSLGKEFQNQS-GITVNVQAEQCHSRLSEG 354 Query: 410 QRVTLFRVCQEGLNNIVKHADASAVTLQ---GWQQDERLMLVIEDDGSGLP---PGSGQQ 463 + L+RV QE + N+ +H+ AS V + G QQ L+L +ED+G GLP P SG Sbjct: 355 AKTALYRVVQECMTNVARHSHASEVAISLKVGVQQ---LVLSVEDNGVGLPRPLPKSG-- 409 Query: 464 GFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLP 496 G G MRER+ GG L +S GTR+ V +P Sbjct: 410 GLGFRNMRERIETYGGRLTLSRRASGGTRIKVQMP 444 >UniRef50_Q07MS8 Signal transduction histidine kinase, glucose-6-phosphate specific n=4 Tax=Bradyrhizobiaceae RepID=Q07MS8_RHOP5 Length = 464 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 129/230 (56%), Gaps = 15/230 (6%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L A +L L L + + LA R++ +++ R+++ARELHD+ G + A+R AG Sbjct: 220 LAAICAKLNHLAGVLGAAIDDKRRLAARVVSLQDAERKEIARELHDEFGPFLFALRAHAG 279 Query: 329 IVQRLAA----DNASVKQSG-QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 + R+AA D A++++ G ++EQ++ + + RR+L RLRP L +L L +A+++L Sbjct: 280 SLTRMAALPSPDIAALQKHGAAMLEQIN-ALQRSNRRVLERLRPAGLSELGLVEALQALA 338 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS--AVTLQGWQQ 441 R + + SE +T++RV QE L N+ +HA A+ VT++ +++ Sbjct: 339 RLWRETHPDVAIVMAVSPSLPVASEIVELTIYRVVQEALTNVFRHAGATRVEVTIEAFER 398 Query: 442 D------ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC 485 + + +EDDG GL P + G GLTGMRERV ALGGT+ +S Sbjct: 399 STAEHHGSAVRVRVEDDGIGL-PADHKLGHGLTGMRERVMALGGTMTLSS 447 >UniRef50_UPI0000E0F7AF sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=2 Tax=Proteobacteria RepID=UPI0000E0F7AF Length = 533 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 116/529 (21%), Positives = 214/529 (40%), Gaps = 80/529 (15%) Query: 23 FCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGA---------------- 66 F ++ S D A+ FP G L L P +WP L A Sbjct: 27 FSFFTASFGYSVVTDFAIWYFPLGFHFILFLVLPFKFWPTALIALGIGAGLTMYNQGSIY 86 Query: 67 -EWLLIYWLTQAVGLTHFPLLMIG-------------SLLTLLPVALISRYRHQRDWRTL 112 +WL + LT + + P++ I +++TL+ ++SR + Sbjct: 87 YDWLKHFLLTLTISIHTLPVVFIAQKMIQKLDIFSLKAIVTLVLFGMLSRLTN------- 139 Query: 113 LLQGAALTAAALLQSLP-------WLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANN 165 + L+ ++ +P +L H ++ +L+ I + F + + Sbjct: 140 -IGFHFLSNTSVYDKIPVNEKFGMFLQHNIAAYPGILMA---------ISVYFLYQWYRH 189 Query: 166 TWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWH 225 + L ++++ I +LLF IS+ Q L LPII + Sbjct: 190 STLKFTRNMLASTIRLAVALTTLIVLLFSISVTSQ--------NILQLVLILPIIWFGYR 241 Query: 226 YGWQGALIATL-MNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ-RLRELNQSL 283 Y W ++++ L +N + L+ + +V L+ AG+Q + +SL Sbjct: 242 YRWVASIVSALWINLVLLVLLYNTSPEQLVAFQPFIVCYFLIGLVTAGLQIDHNTIYESL 301 Query: 284 QK----------ELARN----QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 QK EL++ Q +A+ ++ +E +++V++ELHDD+GQ ITA+R + Sbjct: 302 QKHQTQLKFKYHELSQTKQQLQSMAKEIIAVQEIEKKNVSQELHDDVGQNITALRLAITM 361 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 +++ K S ++ ++ +Y L+ LRPR +DDL L + ++L Sbjct: 362 LEKNEKLTVQDKHSVHELKIMTDEIYSNAYDLMYWLRPRMVDDLGLSATLTGHFFSLKLT 421 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 I + L++ ++ +FR+ QE +NN+++H+ A+ + + L Sbjct: 422 QNNIEYSHQVSTSVDQLNDTIKIAIFRIVQECVNNVIEHSQATQCHINLHLYASIIKLEF 481 Query: 450 EDDGSGLPPGSGQQGF--GLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 D+G G Q GL + + AL G L +S G RV V LP Sbjct: 482 FDNGIGFNQNILDQPLRGGLFNIHNNMLALNGKLSLSNEEGARVYVELP 530 >UniRef50_B0P062 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P062_9CLOT Length = 440 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 94/362 (25%), Positives = 179/362 (49%), Gaps = 36/362 (9%) Query: 149 LTLAPICLVFWHYLANNTWLPLGPSLVS--QPINWRGRHLVWYLLLFVISLWLQLGLPDE 206 L L I V+ +Y N L + +V+ + + RG V ++++ S + + + + Sbjct: 98 LCLIIIKFVYVNY--NGIILLVIADIVTDIKDKHTRGIFFVIMGMIYLFSDYDIISMFID 155 Query: 207 LSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIA------SQTWRDHPVDLLLSLL 260 + F F P G + L+A +NAIA IA +++ LL+L Sbjct: 156 MISFQQFLSVYPAKVSMMIQGTRNILVA--LNAIAFIAYMIILMRNQMKENARIGLLNLQ 213 Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 +Q+ A I RL+E+N+ L+ + E++ ET E R +ARE+HD +G T+ Sbjct: 214 LQT-------ANI-RLKEMNEQLKDY----SEMTEKMAETRE--RNRIAREIHDTLGHTM 259 Query: 321 TAIRTQAGIVQRLAADNASVKQSGQLIEQLSL----GVYDAVRRLLGRLRPRQLDDLTLE 376 T + AGI +A + SV + + + ++S G+ D +RR + +LRP L+ L+ Sbjct: 260 TGL--SAGIDACIAMIDFSVDATKEQLNKISQVARQGIKD-IRRSVNKLRPDALEHSGLQ 316 Query: 377 QAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL 436 +A+ ++ E ++ + + + +++ ++++ ++RV QE + N ++H A + + Sbjct: 317 EALEKMINET-MQVSDVKINYDCQVEVLKFNQDEEDMIYRVVQESITNAIRHGKAKQIDV 375 Query: 437 QGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 W++D+ L L I+D+G G GFGL + ER+ L GT+ +G +V+ +P Sbjct: 376 NLWKEDKWLNLEIKDNGIGCEE--IHTGFGLIHIEERIKMLKGTVEYDGSNGFKVTARIP 433 Query: 497 QR 498 R Sbjct: 434 IR 435 >UniRef50_B6BUB0 Multi-sensor signal transduction histidine kinase n=2 Tax=Betaproteobacteria RepID=B6BUB0_9PROT Length = 541 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 125/231 (54%), Gaps = 13/231 (5%) Query: 276 LRELNQSLQKE-----LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 +R++++ L+ E L +N+ L + E E RR +ARELHD++GQ ++AI+ + Sbjct: 310 MRDISEKLKAERSKKALDQNRKLTGIIQEKIEDERRSLARELHDELGQYVSAIKIFTQNI 369 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + A N + S + + + +YD + ++ +LRP LD+L L + I L+ + + Sbjct: 370 KNQAKGNDLIATSAESVTSAANQIYDGMHNIIRKLRPGSLDNLGLVETINDLVGVWQKQY 429 Query: 391 RGI-VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER-LMLV 448 + VS +++ LSE + ++R+ QEG+NN +KHADAS V + G D+R L + Sbjct: 430 PAMKVSFKHNKVEN--LSEEISINIYRIIQEGMNNCLKHADASEVHI-GLIVDKRYLKIS 486 Query: 449 IEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLP 496 +D+G G + FG+ GMRER+ L G + S GT ++ +P Sbjct: 487 FKDNGKGFDTKMLKSSKQFGIVGMRERIQGLNGKFELQSNEEGTIITGLIP 537 >UniRef50_Q4K8Y6 Sensor histidine kinase, putative n=8 Tax=Pseudomonas RepID=Q4K8Y6_PSEF5 Length = 330 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 12/213 (5%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQS--GQLIE 348 Q LAERLLE +E+ R ++RELHDDIGQ +TA + Q ++R D + G +E Sbjct: 107 QELAERLLEVKENERHRLSRELHDDIGQLLTAAKLQTDWLKRRLPDELQEHCAVLGTTLE 166 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSE 408 + VR + L PRQL L LE ++R+ + + LE + LE + + E Sbjct: 167 E----TLAKVRDVSAILNPRQLASLGLEASLRAHLLKT-LENTSVHWSLECHQRLAGIPE 221 Query: 409 NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS--GQQG-F 465 V FR+ QE + NI++HA A + ++ + E L L I DDG G P S G QG Sbjct: 222 EMAVAAFRITQEAVTNILRHAQAKNLLVRLQRLPEGLSLFISDDGQGFAPASDPGAQGQR 281 Query: 466 GLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G+ GM+ER++ LGG L ++ GT++ P Sbjct: 282 GMAGMQERISQLGGLLKVTSEADQGTQIEALFP 314 >UniRef50_B2A6W3 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W3_NATTJ Length = 490 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 17/239 (7%) Query: 272 GIQRLRELNQS----LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 G++ LRE N+S L+K+ + L +++ +E R+ ++RELHD GQ++T ++ Sbjct: 237 GLKSLRENNESCWVQLEKKEEMRKKLLNKMMSAQEEERKKISRELHDGTGQSLTTLKLAL 296 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + D K+ + + +L+ V D ++ L LRP LDDL L+ A+ ++E Sbjct: 297 KQISE-TNDLEEAKRMSEELRELTGDVIDEIKSLARDLRPSVLDDLGLDYALEKYLKE-- 353 Query: 388 LEGR-GIVSHLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 ++GR G+ + ++ D+ L ++R+ QE +NN +KHADAS + + +L Sbjct: 354 IQGRTGVSTEFWFQADQGLKLEPEISTNIYRIVQESVNNSIKHADASKIDVIVKTISSQL 413 Query: 446 MLVIEDDGSGLP--------PGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 +++IEDDG G + +G G+ GM ER +GG L I G +V L Sbjct: 414 IVIIEDDGKGFDLEQFSDNYKQNETRGLGIFGMEERAELIGGHLAIESTPGDGTAVYLK 472 >UniRef50_A8LRP9 Integral membrane sensor signal transduction histidine kinase n=28 Tax=Rhodobacterales RepID=A8LRP9_DINSH Length = 480 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 126/245 (51%), Gaps = 15/245 (6%) Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 L +LL +GLL+ +RL + A+ + L +R+L+T+E R VARELHD Sbjct: 224 LAALLAVFASGLLINIRERRLAD---------AKLKALTQRVLDTQEEERGRVARELHDS 274 Query: 316 IGQTITAIRTQAGIVQRL--AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 I Q + IR + +R D + + + I+ L+ G VRR+ LRP QLDDL Sbjct: 275 ISQLLVGIRYALELARRRVQTGDARAQENIEKGIDGLN-GAIQEVRRISRDLRPGQLDDL 333 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L AI+ L E + GI + ++ + + L ++ L+R+ QE L NI +HA A+ Sbjct: 334 GLGPAIQDLAEEF-TKRTGIRAEMKTVVFRNRLDPEAKIALYRIAQEALTNIERHAQATE 392 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGS-GQQGFGLTGMRERVTALGGTLHI-SCLHGTRV 491 V L + L + D+G GL S G G GL M+ERV L GTL + S GTR+ Sbjct: 393 VHLDLFGHQTGATLRVADNGRGLANVSRGAGGLGLRNMQERVEQLDGTLQVFSSEAGTRI 452 Query: 492 SVSLP 496 ++P Sbjct: 453 DATVP 457 >UniRef50_Q2SNP1 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNP1_HAHCH Length = 488 Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 6/227 (2%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 ++RE +L+ + N+ L L E R+ +A+E+HD+ T+ AI+ + +++LA Sbjct: 262 QVRERTHALEVAVEENRMLGNTLRTALEDERKLIAQEIHDNFNATLVAIKMYSQKIEQLA 321 Query: 335 ---ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 ++A + G I + Y + R L+ RLRP +D L L A+ L+ Sbjct: 322 REGGEDAQIAGMGGKITSIVTDAYSSARSLVSRLRPEIIDTLGLSGALEELVNNYNQSSN 381 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 G L L E + + ++R+ QE + N VKHA A V + + + LVI+D Sbjct: 382 GCSFMLSIGDHCDNLDEERNIGIYRIVQEAVTNAVKHAAAKEVAIS-LHRPKDYELVIQD 440 Query: 452 DGSGLPP-GSGQQGFGLTGMRERVTALGGTLH-ISCLHGTRVSVSLP 496 DG G P G GL MRER +LGG ++ G R+ VS+P Sbjct: 441 DGVGFKPLQEKDAGIGLISMRERAMSLGGRFESVNTEAGARIKVSIP 487 >UniRef50_Q60AR7 Sensor protein n=1 Tax=Methylococcus capsulatus RepID=Q60AR7_METCA Length = 439 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 123/223 (55%), Gaps = 12/223 (5%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 +L+K N+ LA+R L +E RR +A+ELHD++GQ+++AI+ A +++ D+ Sbjct: 211 TLEKTREENRALAQRSLAIQEEERRYLAQELHDELGQSLSAIKAIAASLRKPERDDRPNA 270 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 + I+ + ++ +R L+ RLRP LD+L L+ ++ ++ GR L++ Sbjct: 271 DAIGAIQSICDHLFAVLRTLMQRLRPLMLDELGLKASLEDMIENW--RGRYPSIALDFSC 328 Query: 402 DESALSE---NQRVTLFRVCQEGLNNIVKHADASAVTLQ------GWQQDERLMLVIEDD 452 D+ + E + R+ +FR+ QE L N+V+H+ A+ + + ++ E L+L + DD Sbjct: 329 DD-GIDECIGDARIHVFRIVQESLTNVVRHSGAAKLGIHLDLIEATGERPEALLLEVSDD 387 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 G+G P G GL G+RERV +L G +S G V++ + Sbjct: 388 GAGFDPARVPAGLGLLGIRERVESLRGQFSLSTRPGAGVTLRI 430 >UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9GAMM Length = 525 Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 107/372 (28%), Positives = 163/372 (43%), Gaps = 36/372 (9%) Query: 153 PICLVFWHYLANNTWLPLGPSLVSQ--------PINWRG-----RHLVWYLLLFVISL-- 197 PI ++F H+ + LG L++ P W+G R L + L FV+ Sbjct: 154 PILMIFVHWWQGDV---LGIILITPLILVWRDWPDYWQGQNRMARMLGLFALAFVVGQLT 210 Query: 198 ---WLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQ-----TWR 249 WL+ D + F L I A A +G G L+ ++ A ++ T+R Sbjct: 211 YLGWLEALFADHARAYWSF---LFITAAAVGFGRHGVLLIIVLTAGQVLFGHMRNVGTFR 267 Query: 250 DHPV-DLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDV 308 D + D+ L++ ++ G+ L ++ L+ + L +R + E R + Sbjct: 268 DSGLQDIWFFLVILTIVGVALAINVEERIRREADLRVSQRTLKALMQRNEQVREEERHHI 327 Query: 309 ARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPR 368 ARE+HD++GQ +TAI+ A ++ R S + + QL G VR + LRP Sbjct: 328 AREIHDELGQVLTAIKMHAALLTRTTPHAGSWRDDINHLLQLIDGGIKVVRNIALHLRPP 387 Query: 369 QLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKH 428 L L L A++ L + E GIV L D S + E TLFR+ QE L NI +H Sbjct: 388 ILA-LGLVPALQWLTDQFA-ETHGIVCELATEGDTSGIQEPYLTTLFRLAQEALTNIARH 445 Query: 429 ADASAVTLQGWQQDERLMLVIEDDGSGLPPG---SGQQGFGLTGMRERVTALGGTLHI-S 484 A+A V ++ + ER+ LV+ D+G G GL GM RV L G I S Sbjct: 446 AEAGKVWIKLTAEPERISLVVADNGHGFDVDEELKTGNSLGLNGMLHRVEMLDGEFEIHS 505 Query: 485 CLHGTRVSVSLP 496 GT + LP Sbjct: 506 NAEGTILLCHLP 517 >UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YIX9_NOCDA Length = 412 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 36/325 (11%) Query: 190 LLLFVISLWLQ-LGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTW 248 ++F +SL+ + + LP R T +A +AL N + + T Sbjct: 99 FMMFTVSLFFRAMALP---RRLTLVGIAATAVAL-------------YTNTMGFPGTDTE 142 Query: 249 RDHPVDLLLSLLVQSLTGLLLGAGI---------QRLRELNQS-LQKELARNQHLAERLL 298 R L + + V ++ + +G G+ R R + + L+ L N L +LL Sbjct: 143 RPFLEHLFVYVGVITIQTVAVGGGLVIASKAAEQHRERRVTVARLEAALEENAGLHAQLL 202 Query: 299 ETEESV-----RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLG 353 R+ +ARE+HD + Q + I TQ QR+ D + + L+ Sbjct: 203 TQAREAGVLDERQRMAREIHDTLAQGLAGIVTQIQAAQRVWEDPGAARPHADRALGLARE 262 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 RR + LRP QL + L +A+ L R E G+ L+ + ALS V Sbjct: 263 SLAEARRSVQALRPGQLAESQLPEALGELTRRWAEE-HGVRPDLDVTGERVALSPAIEVV 321 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRER 473 LFRV QE L N+ +HADAS V + D+ ++L + DDG G+ G Q GFGL+ MR+R Sbjct: 322 LFRVAQEALTNVARHADASRVGVTLSYSDDVVLLDVRDDGRGI-TGHNQHGFGLSSMRQR 380 Query: 474 VTALGGTLHISC--LHGTRVSVSLP 496 V +GG L I GT VS ++P Sbjct: 381 VRGIGGALEIESGEGEGTAVSATVP 405 >UniRef50_C5ATJ2 Sensor histidine kinase n=1 Tax=Methylobacterium extorquens AM1 RepID=C5ATJ2_METEA Length = 481 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 3/220 (1%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 L L++ A + L +RL + +E RR +ARELHD+ GQ +TA A ++ A D Sbjct: 227 LGHGLERSTAERKALTQRLFQVQEEERRALARELHDEFGQCLTATGALAAAIEAGAGDRP 286 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 + + Q I +++ + +R L LRP L++ L++A++ L+ + L Sbjct: 287 DLHEDAQAISRITRQMMQTLREALAHLRPPDLEEFGLQRALQRLVATWQRR-EAPAFRLA 345 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 D S + ++++R+ QE L N V+H + V +Q E + +V+ DDG G+P Sbjct: 346 VDGDFSGVPGPVALSVYRIVQECLTNAVRHGRPTEVDVQLGVSAEEVFVVVRDDGGGVPA 405 Query: 459 GS-GQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLP 496 + G G GL GMRERV ALGG L I S +G R+ +P Sbjct: 406 DTDGVDGHGLLGMRERVEALGGRLRIGSARNGLRIEAVIP 445 >UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47G83_DECAR Length = 683 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/295 (30%), Positives = 135/295 (45%), Gaps = 47/295 (15%) Query: 227 GWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKE 286 WQ L+ ++L+ +D PV+L LS ++ G L I R Q + E Sbjct: 404 AWQSPSDLALLGIVSLVRDD--QDIPVELSLS--STTVRGERLVTAIFRDLSERQRTELE 459 Query: 287 LARNQHLAERLLETEESVRRD----VARELHDDIGQTITAIRTQAG-IVQRLAADNASVK 341 L ++ + L + ESVR ++RELHD++GQ +T +R + + RL ++ Sbjct: 460 LLKSNRQLQELTASLESVREQERLRISRELHDELGQALTGLRMEISWLGGRLLTTQPELE 519 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 Q I++L G +VRR+ LRP LDDL G + W + Sbjct: 520 QKVVSIKKLIDGTIKSVRRISSELRPLVLDDL------------------GFAAAANWYV 561 Query: 402 DESALSENQRVTL-----------------FRVCQEGLNNIVKHADASAVTLQGWQQDER 444 D+ A N +VTL FRV QE L N+ +HA A V ++ Q +++ Sbjct: 562 DQFATRTNLKVTLELPNDDPENGGTVATTLFRVLQESLTNVARHAGARNVDIRLLQANDQ 621 Query: 445 LMLVIEDDGSGLPPGSGQQ-GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 L I DDG G S + G GL GMRERV ALGG+ ++ GT + + +P Sbjct: 622 WRLEIRDDGQGFDQSSAKMGGIGLIGMRERVQALGGSFELTAAPGQGTLIEICIP 676 >UniRef50_B2JBH1 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JBH1_NOSP7 Length = 381 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 28/226 (12%) Query: 284 QKELARNQHLAERLLETEESVRRD-VARELHDDIGQTITAIRTQAGIVQRL--------- 333 QK R + L+E++ ++ R +ARE+HD +G T+T + Q + Q+L Sbjct: 170 QKSRQRVEELSEQVETLAATLERTRIAREIHDSLGHTLTDLDIQLAVAQQLRFRNLEQAF 229 Query: 334 -AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 A D A + +GQ IE +S + L R+R D L QA+ +LM ++ Sbjct: 230 QAVDTAKIL-AGQCIEDVS--------QALARMRQ---SDFDLNQALTALMEQVR---HN 274 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 +EW+++ LS ++ ++ + +EG+ N+ KHA AS V G E ++L I+D+ Sbjct: 275 SALQVEWQVNLPKLSVHKSYQIYCIVKEGMVNVQKHAHASQVNFCGRLTSEGIVLNIKDN 334 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 G G P GFG+ GM ERV LGG L + GT++ V LP Sbjct: 335 GVGFDPEKLHIGFGIQGMVERVQLLGGKLELKTALAQGTQIQVRLP 380 >UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV68_METML Length = 499 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 125/235 (53%), Gaps = 9/235 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQ--HLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 +G I + N+ L+ + +R++ L + + +E R +ARE+HDD+G +TAI+ Sbjct: 265 VGMMINITQSKNEKLELQESRHELAQLTAHMNQIKELERTRIAREIHDDLGGNLTAIKIG 324 Query: 327 -AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 I+ R+A + + +E + ++A+ ++ LRP LD L + A+ +E Sbjct: 325 LTSIINRIATGLPVSFEQAKGLESIVDNTFEAIHKISSDLRPNILD-LGIVAALEWQAKE 383 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 E + G+ + ++ +Q +TLFR+CQE ++NI KHA+ASAV + + Sbjct: 384 FEKQ-VGVTCTFTTNQADIVVTPDQAITLFRICQESMSNIAKHANASAVHVDLNLHYGEI 442 Query: 446 MLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 ++ I D+G G+ + FGL GM+ERV AL G+ I L GT ++V+LP Sbjct: 443 IMKISDNGIGINTADTYKPNSFGLRGMQERVAALYGSFDIEQLAGQGTVIAVTLP 497 >UniRef50_C0N6H6 Histidine kinase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H6_9GAMM Length = 424 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 16/261 (6%) Query: 252 PVDLLLSLLVQSLTGLL-----------LGAGIQRLRELNQSLQKELARNQHLAERLLET 300 P+D + L S TG L + + + +LQ + N L ++++ Sbjct: 162 PIDTITEALSDSETGQLDRRLPIFDLPEMANISHKFNLMASTLQGSINNNHRLTQQIIRL 221 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV-KQSGQLIEQLSLGVYDAVR 359 +E+ R+ +A +LHD+IGQ +TAI A ++ + N + K+S + I+++ + + VR Sbjct: 222 QEAERKKLAHDLHDEIGQHLTAIHVDASAIK--TSPNLDIAKKSAEAIDEVVRRMMEIVR 279 Query: 360 RLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQ 419 +L +LRP LD+L A++ L+ + I ++ D + E ++TL+RV Q Sbjct: 280 TMLHQLRPDGLDELGFVVALQELVNNWRERHQNIDVEADFNGDFQRIDETVQLTLYRVMQ 339 Query: 420 EGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGG 479 E L NI +H+ A V + + ++ + L I D+G G FGL GM+ERV ++ G Sbjct: 340 ECLTNISRHSRARQVWVSLTENEQAIKLEIADNGQGFDLQQHSYRFGLAGMKERVDSVHG 399 Query: 480 TLHISCL--HGTRVSVSLPQR 498 I G + VS+P++ Sbjct: 400 EFVIKTALNEGVTIDVSIPKQ 420 >UniRef50_Q01NL1 Histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NL1_SOLUE Length = 452 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 9/223 (4%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASV 340 ++++ A Q L+ RLLE EE RR ++RELHD+IGQT+ ++ + Q A A++ Sbjct: 221 AVEQTRAELQQLSARLLEIEEEGRRKLSRELHDEIGQTLALLQIEISRAQVARAGTPAAL 280 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 ++ +L+ VR + G LRP LDDL L A++ + + L GIV + Sbjct: 281 REHLDRARELAERTVQTVRNISGLLRPALLDDLGLVPALQFQLEDF-LRRSGIVCEFVEQ 339 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 L + + ++RV QE L+N KH+ A V + Q E L+ IEDDG G G Sbjct: 340 GVADHLPDPVKTCVYRVVQEALHNCEKHSGARKVRVSVRQFPEALVAEIEDDGVGFQMGG 399 Query: 461 GQQ-----GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + G GL GMRER +GG+L I HGTRV++ +P Sbjct: 400 RRASERNMGLGLLGMRERAGNVGGSLVIDSAPRHGTRVALRIP 442 >UniRef50_Q2BPE6 Sensor histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPE6_9GAMM Length = 451 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 4/203 (1%) Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR--LAADNASVKQSGQL 346 R + LA ++ + S RR+ ARELHD I Q + +++ + + + L D+++V + Sbjct: 240 RLRQLAHNHVQFQVSQRRNFARELHDGINQLMVSVKFRLELARDKLLKQDDSAVNDLDKG 299 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 + L++ + + VRR+ LRP QLDDL LE AI S+ + R +++++ + E L Sbjct: 300 CDVLNMAIQE-VRRISHDLRPIQLDDLGLESAIYSMTSDFSERTR-MLTNVRIELPEQRL 357 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFG 466 ++ +TL+R+ QE L NI KHA+A+ V ++ W ++ + + + DDG G + G G Sbjct: 358 PDDIEITLYRIVQESLTNIEKHAEANNVGIRIWPKEGYIWVEVADDGKGFVEDKAEAGIG 417 Query: 467 LTGMRERVTALGGTLHISCLHGT 489 L MRER L G + G+ Sbjct: 418 LLNMRERTELLSGHFSLKSRPGS 440 >UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TG52_RICCO Length = 335 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 18/241 (7%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G++L I + + Q +++ Q L + + +E R +ARE+HDD+G +TA++ Sbjct: 97 GIMLN--ISQSKHEKQEIEQARRDLQALTAHIHQVKEQERVSIAREIHDDLGGNLTAMKL 154 Query: 326 Q-AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLD----DLTLEQAIR 380 + I+Q++ + +++ + +DAV R+ G LRP LD D LE + Sbjct: 155 GLSTIIQQIEDSQQVNMEQATMLQAIINQTFDAVHRISGNLRPNILDLGLVD-ALEWQVS 213 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 +++ + R + + + D +Q + LFR+CQE L+NI K+A A V+++ Sbjct: 214 QFKKQLGITARFVTNCHDLECDP-----DQSMALFRICQEALSNIAKYAQADLVSVELSL 268 Query: 441 QDERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHI---SCLHGTRVSVSL 495 D+ L + I D+G G+ P FGL GM+ER ALGG HI S GT + V Sbjct: 269 VDQALFMTISDNGVGIAPADKIKPNSFGLRGMQERAAALGGECHIEASSSGPGTCIHVRA 328 Query: 496 P 496 P Sbjct: 329 P 329 >UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BTT3_9GAMM Length = 732 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 14/236 (5%) Query: 273 IQRLRELNQSLQKE----LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 +Q + EL Q+ Q E L N+ L R + +E + +A ELHD+ GQ ITAI+ A Sbjct: 466 LQDISELKQA-QAETLRLLEENRFLIHRSMAIKEEELKRLAYELHDEFGQCITAIQADAE 524 Query: 329 IVQRLAADNA-------SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 + LAA + S I ++S YD V L+ +LRP LD+L L +A+R Sbjct: 525 TIVDLAARKQQQPIILNKINLSANAILEVSSHAYDVVHSLMQQLRPSGLDELGLVEALRD 584 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 L+ + + + L E + ++RV QE L NI K+A AS V+++ Sbjct: 585 LVSTWQARHKKTRCIFRATGELHHLGETINIQVYRVVQECLTNIAKYAQASHVSIKLTVD 644 Query: 442 DER--LMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 + L+L ++D+G G+ ++G GL GMRER TAL G L + G V ++L Sbjct: 645 SVKKILILCVQDNGQGMNLTQYKRGLGLIGMRERATALEGNLQLESALGDGVQITL 700 >UniRef50_Q0G657 Two-component sensor histidine kinase n=2 Tax=Aurantimonadaceae RepID=Q0G657_9RHIZ Length = 454 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 14/237 (5%) Query: 272 GIQRLRELNQSLQKELAR-------NQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 G LR+L + L + R N+ L+E+L ++ R +AR+LHDD+G + AI Sbjct: 201 GPPELRDLARGLNQMADRLGEASLANRRLSEQLQRLQDEERAALARDLHDDVGPLLFAID 260 Query: 325 TQAGIVQR--LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 +AG + R L + + + +I+Q + AVRR+L LRP + L L+ A+ Sbjct: 261 VEAGAIARKLLKDEESGAAERANVIKQNAAQARKAVRRILTELRPGVMPGLGLKAALEEH 320 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 + + + +E +++ T+FR +E +NN +KH + ++++ ++D Sbjct: 321 LATLGQRHPNVTFKIEA--EDATYPAPVETTMFRAIREAVNNALKHGLPTRISVKVAERD 378 Query: 443 ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL---HGTRVSVSLP 496 L + DDG G G + GFG+ GMRER+ + GG L I + G RV +P Sbjct: 379 GNLTFNVRDDGGGFADGKQKSGFGIIGMRERLESAGGALKIDEVLLPAGVRVEGRIP 435 >UniRef50_C6QC56 Histidine kinase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC56_9RHIZ Length = 454 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 118/221 (53%), Gaps = 12/221 (5%) Query: 271 AGIQRLRE----LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 A + R+ E L++ L K A LA +L++ +E R +ARELHDD+ Q ++ I Sbjct: 210 AELNRISEVFNALSRDLSKATADRAELARKLVDAQEQERLHIARELHDDVAQQLSGINAV 269 Query: 327 AGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 A V+ ++ + S Q +E ++ + ++R+ L LRP ++DDL L +++R+L+ + Sbjct: 270 AACVRSKVNRKDPSATQDATELETMTSKLMISLRKTLTYLRPPEIDDLGLIESLRNLVEK 329 Query: 386 MELEGRGIVSH-LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA--SAVTLQGWQQD 442 +G + LE + LS ++R+ QE LNN +HA A V L + + Sbjct: 330 YNSLAQGGTHYTLETNGNLEDLSSEASAHVYRIIQEALNNAARHAHALNVKVMLHKFNES 389 Query: 443 --ERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGG 479 +++ + ++DDG G P + G+G+ GMRERV AL G Sbjct: 390 GTDKIEVSVDDDGCGRPSQNTSTFGGWGMIGMRERVLALSG 430 >UniRef50_A6WW19 Integral membrane sensor signal transduction histidine kinase n=46 Tax=Rhizobiales RepID=A6WW19_OCHA4 Length = 485 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 26/230 (11%) Query: 284 QKELARNQ--HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR--------- 332 ++ +A N+ LA+R+++T+E R +ARELHD I Q + +R + R Sbjct: 254 ERRMADNKLKELAQRIIDTQEEERARLARELHDGISQNLVGVRYAIDLASRQVRMDSGGA 313 Query: 333 -LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 LA + AS +G + E VRRL LRPR LDDL L A+++L E Sbjct: 314 PLAIEKASDALNGAIKE---------VRRLSHDLRPRILDDLGLTVALKALCEHFS-ERT 363 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 GI + LE L L+RV QE L N+ +H+ AS V+++ W ++ + + D Sbjct: 364 GIETQLEASGLNETLKPEASTALYRVVQEALTNVERHSGASQVSIRLWGSGGKVTMTVAD 423 Query: 452 DGSGLPPGSGQQ---GFGLTGMRERVTALGGTLHISC-LHGTRVSVSLPQ 497 DG+G + G GL M+ER+ GG L + GT+++ LP+ Sbjct: 424 DGNGFTARDLKDQLSGLGLRNMQERMAHFGGVLLVETGADGTQLTARLPK 473 >UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSI9_9BACT Length = 656 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 82/232 (35%), Positives = 117/232 (50%), Gaps = 25/232 (10%) Query: 277 RELNQS-LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 RE++++ L++ + Q L+ RLLE +ES RR +ARELHD+IGQ +TA++ VQR+A Sbjct: 415 REMDEAELKRTTEQLQTLSRRLLELQESERRHIARELHDEIGQGLTALKINLQAVQRMAN 474 Query: 336 DNASVKQSGQLIEQLSLGVYDA----VRRLLGRLRPRQLDDLTLEQAIR----SLMREME 387 A S +L++ S+G+ D VR L LRP LDDL L A+R + Sbjct: 475 STAF---SPRLLD--SIGIVDKTLRQVRNLSLDLRPSMLDDLGLFAALRWYADQQAQRAG 529 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 L + +E R D + FRV QE L NIV+HA+A VT+ ++ L L Sbjct: 530 LRIQFAAEPMEMRQDPAL-----ETACFRVAQEALTNIVRHAEAQNVTIDLNVAEKDLQL 584 Query: 448 VIEDDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLHISCLHGTRVSV 493 I DDG G ++ GL GM ER + +GG + G V Sbjct: 585 TIRDDGIGFDMKKVREHVAAGSSLGLLGMEERASLMGGRVEFKSTPGEGTEV 636 >UniRef50_A3TPE1 Two-component system, sensor protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TPE1_9MICO Length = 404 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 157/341 (46%), Gaps = 39/341 (11%) Query: 184 RHLVWYLLLFVISLW-----LQLGLPDELSRFTPFCLALPIIALAWH-YGWQGALIATLM 237 R Y +L+ +S W + L PD S FCL P I W + + ALI T + Sbjct: 76 REGTVYAVLYQLSAWACVLAVILIDPDFESWLLFFCL-FPQI---WATFEKRHALIGTGL 131 Query: 238 NAIALIASQTW-RDHPVDLLLSLLVQSLTGLLLGAG----IQRL-RELN---------QS 282 +AL + D P D++ + LV L +L A I R+ RE QS Sbjct: 132 ALLALFTATVLPSDDPADMVPAALVSVLISFVLSATLGLFIHRIIREAEERALVIDELQS 191 Query: 283 LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAI----RTQAGIVQRLAADNA 338 + +LA +H + + R ++RE+HD + Q T++ R + ++R D A Sbjct: 192 TRAQLAAVEHA-----QGVQDERSRLSREIHDTLAQGFTSVIALSRAASSALERDDVDKA 246 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 ++ +IE ++ R ++ L P L TL +A+ L M E GI Sbjct: 247 --RERLAMIESTAVDNLAEARVIVAELTPGHLQSRTLVEALARLAETMTRE-TGIQVSSS 303 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 + + L N V + R QE L+N+ +H+ A A + + ER+ L ++DDG+G P Sbjct: 304 VAGEPAPLGGNAEVVVLRGAQEALSNVRRHSGAKAAAVTLTYEAERVALEVKDDGAGFDP 363 Query: 459 GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + Q GFGL G+R R T LGG + I+ GTR+ + LP+ Sbjct: 364 TTAQMGFGLDGLRSRATELGGEVSIARAKPRGTRLVMELPR 404 >UniRef50_Q11VH8 Sensor histidine protein kinase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH8_CYTH3 Length = 525 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 15/229 (6%) Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR--TQAGIVQRLAA 335 +L++ ++ + ++ +LE +E RR +ARELHD +GQ +TA++ Q Sbjct: 298 DLSEKFRQSVTEHKIRTTSVLEGQEHERRKIARELHDGLGQMLTALKFNIQGMKTPSTKK 357 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 + A V+ QLI++ L VRR+ L P L+D L A++ L + G +S Sbjct: 358 EQAHVEGIKQLIQETIL----EVRRISFDLMPSVLNDFGLAAALQHLSERFTISGTKQIS 413 Query: 396 HLEWR--IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 +E+ D +N + +R+ QE LNN +K+A+A+ +TL R+ I+D+G Sbjct: 414 -IEYVGVKDIGRFGKNVEINTYRIVQEALNNAIKYAEATKITLDLQFDSNRIQFSIQDNG 472 Query: 454 SGLPPGSGQQ----GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G P ++ G G+T +RERV+ L G L + + GT ++V +P Sbjct: 473 KGFTPHDKKKADGSGRGMTNIRERVSLLNGNLIFNSIIEEGTTITVEIP 521 >UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TQ72_RICCO Length = 249 Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 122/224 (54%), Gaps = 15/224 (6%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 ++Q LQ+ + + L+ L E R +ARELHDD+GQ + ++R ++Q+ A Sbjct: 32 VHQKLQRSRDQLRQLSAALQTIREEERTYIARELHDDLGQILASLRMDLSLLQKDGTGTA 91 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL- 397 ++ +E L ++RR+ LRPR LD+ L A++ L R+ +E GI + L Sbjct: 92 EARRLMAGMESNLLTAIASLRRIATNLRPRALDEGGLYFALQGL-RDDFVERHGIPATLF 150 Query: 398 ----EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 E R+D++A + +FR+ QE L NI +HA+AS VT+ ++ + L++ I DDG Sbjct: 151 ADEAELRLDDAAST-----AIFRIVQEALTNIARHANASHVTMNLYRLNGELLIQIRDDG 205 Query: 454 SGLPPGSGQ--QGFGLTGMRERVTALGGTLHISCLH--GTRVSV 493 G+ + + GL GMRERV A+ G + IS GTR+ + Sbjct: 206 RGIKAEDMEKAESLGLIGMRERVWAMNGDITISSEEPPGTRIDI 249 >UniRef50_B8HNY8 Histidine kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNY8_CYAP4 Length = 403 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%) Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 R +ARE+HD +G +T RL D + ++QL VR+ +G Sbjct: 201 RNRIAREIHDSLGHHLTVFNLHLSAALRLLPTDPEEAIALLEEVKQLGATALQEVRQSVG 260 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 +LR L +LE A+++L+ E+ + GI+ L+ + + L + +V L+R+ QE L Sbjct: 261 QLRTDPLQGNSLETALQTLISEVH-KSTGILPKLQVNLQRT-LPRDVQVALYRIVQESLT 318 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTL-- 481 NI K+A ASA+ + D L L I D+G G GFGL G++ERVTALGGTL Sbjct: 319 NICKYAQASAIQI-CLTADSELHLTIADNGQGFDLSQNTTGFGLQGLKERVTALGGTLTI 377 Query: 482 HISCLHGTRVSVSLP 496 H + G + V P Sbjct: 378 HTAPGQGCEIGVHCP 392 >UniRef50_Q0BVA0 Two component system histidine kinase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BVA0_GRABC Length = 444 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 34/302 (11%) Query: 214 CLALPIIA-LAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAG 272 C++L I+A + W + I+TL + Q R D L L V L + Sbjct: 148 CVSLMIMAAMFWTARYALKPISTLAEGL-----QRMRAGQFDALPPLYVTELKPIG---- 198 Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-- 330 +R +L ++L+ N+ L E+++ +E+ RR++ARELHDD G T+ R + + Sbjct: 199 -ERFNQLAETLRAVRGDNERLLEQMVSLQETERRELARELHDDFGATLFGARAELATLLL 257 Query: 331 --QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +R + + + +L + R+L RLRP LD + + AIR LM + + Sbjct: 258 EARRQGDAGQPIIERAHAVARLIDQIQQQNGRILERLRPMALDHMGIADAIRDLMTQWQD 317 Query: 389 EGRGIVSHLEW--RIDESALSENQRVT--LFRVCQEGLNNIVKHADASAVTL-------- 436 +EW + EN ++ L+R QE L N V+H+ A V + Sbjct: 318 R----YPEMEWWLSMPRDLRIENDQINLVLYRTVQECLTNAVRHSSAERVDVTLSWHDGA 373 Query: 437 QGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVS 494 G RL L+++DDG+GLP + GFGL GM ER+ GG L + + HGT V Sbjct: 374 SGHGSARRLQLLVKDDGTGLPE-HFRMGFGLLGMTERLRQCGGELKVRNNHPHGTLVEAV 432 Query: 495 LP 496 +P Sbjct: 433 MP 434 >UniRef50_B6JD37 Signal transduction histidine kinase containing PAS/PAC sensor domain n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD37_OLICO Length = 358 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/263 (33%), Positives = 129/263 (49%), Gaps = 45/263 (17%) Query: 261 VQSLTGLLLGA-GIQRLRELNQSLQKEL--ARNQ--HLAERLLETEESVRRDVARELHDD 315 ++ +G ++G GI R ++ + EL +R Q L+ L E R +ARELHD+ Sbjct: 102 IRDESGHIIGTVGISRDISERKAAEDELVASRTQLRALSHYLQTVREEERAHIARELHDE 161 Query: 316 IGQTITAIRTQ-AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 +GQT+TA++ + +RL+ADN ++K V RL+G L R + DL Sbjct: 162 LGQTLTAMKMDLVWLRERLSADNGALKPR--------------VERLVG-LADRSVTDL- 205 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTL-----------------FRV 417 Q I S +R + L+ G+VS + W D A N + L FR+ Sbjct: 206 --QRIASDLRPLMLDELGLVSAVHWLTDTVAGQSNLNINLSFDREDLTYGPEVSTAAFRI 263 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP--GSGQQGFGLTGMRERVT 475 QE L NIV+H+ A VT+ ++ L + I DDG GLPP S + GL GM ER Sbjct: 264 VQEALTNIVRHSGARHVTITACHAEDELHIEIVDDGCGLPPTAASPRLHHGLLGMHERAN 323 Query: 476 ALGGTLHISCLH--GTRVSVSLP 496 LGG++ + GTRV SLP Sbjct: 324 MLGGSVAVESAPGGGTRVRASLP 346 >UniRef50_B9J9Z4 Two-component sensor histidine kinase protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9J9Z4_AGRRK Length = 414 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 113/216 (52%), Gaps = 10/216 (4%) Query: 288 ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA----ADNASVKQS 343 +R + L +R+++T+E R +ARELHD + Q + +R + R D A+ + Sbjct: 190 SRLKELTQRVIDTQEEERARLARELHDGVSQNLLGVRYVMDLASRKVRNQVDDAATTIEK 249 Query: 344 GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 G ++ L+ + D +RRL LRPR LDDL L A+ +L E GI + +E Sbjct: 250 G--VDALNSAIKD-IRRLSHDLRPRVLDDLGLTAALTALADNF-AERTGIATEIESVGFS 305 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-PPGSGQ 462 S + L+RV QE LNN+ +H+ A+ + ++ W + R L I D+G+G G G+ Sbjct: 306 SMVKPEASTALYRVAQEALNNVERHSGATLLAIKLWSERGRARLRISDNGTGFEAAGEGK 365 Query: 463 QGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLPQ 497 G GL M+ER+ G L + S GT ++ LP+ Sbjct: 366 GGLGLRNMQERMAHFHGLLLVQSTADGTTLTAMLPK 401 >UniRef50_B1YJQ1 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Exiguobacterium RepID=B1YJQ1_EXIS2 Length = 341 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 9/227 (3%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR--TQAGIVQ 331 +R+ E +++QK R QH+ + ++ R+ +AR+LHD + Q + AI T A Sbjct: 111 KRIDEQVETVQKISTRPQHIEQVRVQAITEERKRLARDLHDSVSQQLYAISMMTTAAKQT 170 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 L + KQ L+E ++ +R LL +LRP +L+ +TL+Q + L+ E+ R Sbjct: 171 ILTQPETAAKQID-LVETMAQTAQSEMRSLLLQLRPVELEGMTLQQGLTQLLEEL---SR 226 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 + L W+++ L LFR+ QEGL N ++HA AS + ++ Q ++ ++L + D Sbjct: 227 KQSTELSWKLEVIELPRPIENELFRIVQEGLTNALRHAKASHMDIELRQFNDTVILSMND 286 Query: 452 DGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSL 495 DG G + +G+ MRER +GGT+ + + GT++ V L Sbjct: 287 DGVGFVVDEKKLASYGINSMRERTAEMGGTIRLVSVPGQGTQIEVKL 333 >UniRef50_Q0EZ32 HrpX related protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ32_9PROT Length = 668 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 117/220 (53%), Gaps = 12/220 (5%) Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQL 346 L N+ L +L++ +E RR +AR+LHD++GQ +T I+T+ + A D + V+ G+ Sbjct: 442 LQENRALMRQLMQVQEDERRTLARDLHDELGQLLTGIQTRGEYITMHAID-SEVRIMGEE 500 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 I + + ++A L RLRP LD L L A+ L E + + GIV L D AL Sbjct: 501 IVRSTSASFNASHASLLRLRPATLDTLGLTAALTELTGERQKQA-GIVCSLRIDGDIDAL 559 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTL------QGWQQDERLMLVIEDDGSGLPPGS 460 + + + ++R+ QEGL N +H A V + +D +L + I D+G G+ + Sbjct: 560 DDMRAIAIYRLVQEGLTNAFRHGKADCVNVIIRALPAHAGRDGQLQVEISDNGKGVHAEA 619 Query: 461 GQ--QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + G G+ GMRERV ALGGT ++ + G R+ LP Sbjct: 620 DRTPTGMGVIGMRERVHALGGTFMLTHVPEDGVRIKAMLP 659 >UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Burkholderia RepID=B2TG29_BURPP Length = 370 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 10/204 (4%) Query: 299 ETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLA-----ADNASVKQSGQLIEQLSL 352 + E+ +R +ARELHDD+GQ ITA++ + + LA A A + ++ +QL Sbjct: 155 QARENEQRRIARELHDDLGQQITALKMTLALHETELARHFSEAGRARLGSVREMADQLD- 213 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 + ++RR+ LRP LDDL LE A+ + E + G+ E D L++ + Sbjct: 214 AMATSMRRIAADLRPPMLDDLGLEAALEWMTEGFE-QRYGVPVRCEISPDVLCLNDLAAI 272 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP--PGSGQQGFGLTGM 470 +L+RV QE L N+ +HA A+ V + D L I DDG GLP P FGL GM Sbjct: 273 SLYRVIQEALTNVARHARANEVFVTLSADDRHYHLQIHDDGVGLPKAPAPRADCFGLLGM 332 Query: 471 RERVTALGGTLHISCLHGTRVSVS 494 RER++ LGG L + + G V+++ Sbjct: 333 RERISQLGGVLSVDSIPGRGVTIT 356 >UniRef50_B4WJL4 Histidine kinase domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WJL4_9SYNE Length = 439 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/226 (33%), Positives = 114/226 (50%), Gaps = 10/226 (4%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 RL++ NQ+L+ + LA ++ E R +AR++HD +G ++TA+ Q +L Sbjct: 214 HRLQQANQTLRHSAQEIEKLA---MDQE---RSRIARDIHDSLGHSLTALNIQLESAVKL 267 Query: 334 -AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 D Q Q ++L VR+ + LR L +LE AI L+ +++ Sbjct: 268 WEKDPQRSHQFLQNAKRLGSQSLQEVRQSVATLRQDPLMGQSLETAIVHLIEDIQSSPSN 327 Query: 393 IVSHLEWRID-ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 + +E I +AL N +V L+R+ Q GL NIVKHA+A LQ L +ED Sbjct: 328 HLD-IEHHIKLATALPSNLQVLLYRIVQAGLTNIVKHANAKHARLQLLSSQAIATLSLED 386 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLP 496 DG G P + GFGL MR+R ++GGT + S GT + VSLP Sbjct: 387 DGEGFDPLGAKAGFGLQSMRDRAESVGGTFVLNSSRQGTSIQVSLP 432 >UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314U9_DESDG Length = 387 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 122/222 (54%), Gaps = 21/222 (9%) Query: 279 LNQSLQKELARN-QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 ++ + QK+++R + L+ ++L +E R+ + RELHD + QT++ I+ L + Sbjct: 160 MDVTEQKQISRRLRRLSAQVLSAQEEERKRIGRELHDSMAQTLSGIKFM------LEGER 213 Query: 338 ASVKQSG---------QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM-E 387 + ++QSG + IE + + + RR++ LRP LDDL L A+R L +EM + Sbjct: 214 SRLEQSGTGWPTERISKTIEYVQHAIVE-TRRIVMDLRPTVLDDLGLIAALRWLQQEMSQ 272 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + I SHL + E+ALS+ Q+ LFRV QE LNN+++H+ + + + Q E ++ Sbjct: 273 IHSLTITSHLS--LPENALSDVQKSVLFRVAQEALNNVIRHSGSDSARISLEQVGEECVM 330 Query: 448 VIEDDGSGLPP-GSGQQGFGLTGMRERVTALGGTLHISCLHG 488 + D+GSG + + G GL MRER+ + G L I G Sbjct: 331 TVTDNGSGFDRLDNTRNGIGLDSMRERLELICGRLDIVTEKG 372 >UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT2_METFK Length = 479 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 119/230 (51%), Gaps = 7/230 (3%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIV 330 I + R Q++++ + L+ +L + +E R +A+E+HDD+G +TAIR + ++ Sbjct: 241 NITQSRREQQAIRESHEKLARLSAQLAQIKEKERLKIAQEVHDDLGGNLTAIRLGLSSMI 300 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 +RL + + + +E + ++A R+ LRP L+ L + A+ + ++ Sbjct: 301 KRLGPEQEVLLAKARQLEAIVDDTFEAAHRIASDLRPNVLE-LGIVAALEWQATQF-VDK 358 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI + E +S + +TLFR+CQE ++NI K+A AS V + E +M+ + Sbjct: 359 IGIPCEFVCNVAEVDISTDHAITLFRICQEAMSNIAKYAKASHVEVTLEASAEEIMMQVI 418 Query: 451 DDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 DDG G+ P FG++GM ER AL G + GT VSV+LP Sbjct: 419 DDGIGIAPVDRLKANAFGISGMSERAVALAGQCKVQAGRQGGTIVSVTLP 468 >UniRef50_B3E9K0 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K0_GEOLS Length = 569 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 115/221 (52%), Gaps = 14/221 (6%) Query: 286 ELARNQHLAERLLETEESV----RRDVARELHDDIGQTITAIRTQA----GIVQRLAADN 337 E + Q E LL +E++ R ++RELHD IGQ + A+ + G ++ Sbjct: 351 EQSAKQQYEELLLIQQEAIEHGERTRISRELHDGIGQALHAVLLRLKLLLGTIE--PGRG 408 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 A G+LI+ + + +R L+ LRP L + +++A++ L +E +G G+ L Sbjct: 409 AERIAIGELIQDIQNASAE-LRNLVISLRPLPLSGMKIDEAVQWLCNNLEKDG-GVSLLL 466 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + D +S+ + LFRVCQEGL NI+KHA A V + +QD ++L I DDGSG Sbjct: 467 QIAGDFDNVSDQCSLVLFRVCQEGLTNILKHAAAKRVQVSLQRQDATVVLTICDDGSGGA 526 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G G GL MRERV GG L I GTR+ V LP Sbjct: 527 QPVGTSGSGLAIMRERVGLAGGRLLIESPAGQGTRIFVELP 567 >UniRef50_C6QGF1 Histidine kinase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QGF1_9RHIZ Length = 454 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 104/200 (52%), Gaps = 6/200 (3%) Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS--VKQSGQL 346 +NQ L E+L +E R ++AR+LHD+IG + A+ A + + A NA+ V Sbjct: 225 QNQRLNEQLSTVQEEERSEIARDLHDEIGPFLFAVDVDAQSIPLMLARNATDDVNSRAGA 284 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 I Q + +R +L RLRP L D L AI L+ IV + I+++ Sbjct: 285 IRQSVQHMQVHLRGILSRLRPAMLIDQGLTHAIEHLVAFWRTRRPAIV--FQTDIEDARF 342 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER-LMLVIEDDGSGLPPGSGQQGF 465 + FR+ QEG +N ++H S + L + E L +VI DDGSG+ S ++GF Sbjct: 343 PAHIEEAAFRILQEGTSNAIRHGKPSKIGLSANRTPEAALQIVISDDGSGIA-ASTKRGF 401 Query: 466 GLTGMRERVTALGGTLHISC 485 GL GMRERV AL GTL I+ Sbjct: 402 GLVGMRERVAALDGTLEITT 421 >UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJC2_THIDA Length = 1168 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 119/240 (49%), Gaps = 18/240 (7%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRD----VARELHDDIGQTIT 321 G++L +L EL EL +++ L E+VR D +ARE+HD++GQ +T Sbjct: 928 GIILNVTQTKLNEL------ELRQSRESLRLLTAHREAVREDERKHIAREIHDELGQLLT 981 Query: 322 AIRTQAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 A+R + V DN + + + ++ + VR++ LRP LD L LE AI Sbjct: 982 ALRMEVSAVGMAFGRDNPELDEKVRSMKTVINQTIQTVRQVATSLRPAALD-LGLETAID 1040 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 L E R V E AL E + LFR+ QE L NI +HA A++V+++ Sbjct: 1041 WLASE--FCKRNAVECAVAIPGEIALDEVRATALFRILQETLTNIARHAGATSVSIKLKT 1098 Query: 441 QDERLMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 E + L + D+G G P +QG FGL G+ ERV LGGT+ I G ++V +P Sbjct: 1099 TGEEICLKVTDNGRGFDPEEAKQGGSFGLKGIAERVLILGGTMTIKSAPGQGAELAVCIP 1158 >UniRef50_D1BWR4 Histidine kinase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BWR4_XYLCX Length = 413 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 18/232 (7%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 + RLR + Q ELA QH A E E +ARE+HD + Q ++ TQ + Sbjct: 191 VARLR----AAQAELAATQHAAGVTAERER-----LAREIHDTLAQGFMSVVTQVQVASS 241 Query: 333 L--AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 D+A+ ++ ++E + R L+ P L +L A+R L E Sbjct: 242 ALDRGDDAAARERLAIVEATARDNLAEARGLVAAFAPVSLQGGSLADALRRLAERWSAE- 300 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV--TLQGWQQDERLMLV 448 G+ + +E D L+ ++ V L R QE L N+ +HA ASAV +L+G + L Sbjct: 301 TGLRAVVEAADDVGPLAADEEVVLLRAAQEALTNVRRHAGASAVWLSLEG-GGGAPVRLE 359 Query: 449 IEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 + DDG G+P + ++G+GL GMR+RV A+GG L + GT +SV LP R Sbjct: 360 VVDDGGGIPAAT-REGYGLRGMRDRVVAVGGALDVQAGDDGGTVLSVRLPAR 410 >UniRef50_A2SKA8 Methanol utilization control sensor protein MoxY, putative n=2 Tax=Burkholderiales RepID=A2SKA8_METPP Length = 475 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 13/211 (6%) Query: 284 QKELARNQHLA---ERLLETEESVRRDVARELHDDIGQTITAIRTQA-GIVQRLAADNAS 339 + EL+ + LA +R LE E RR +ARELHD++GQ++T +R+ A + QR+A + Sbjct: 247 EHELSDRRDLARWIDRHLEQE---RRLIARELHDELGQSVTGMRSLALSVAQRVAIADPE 303 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 ++ Q+I S +YDA+ L+ RL P LD L A+R L+ + L Sbjct: 304 AARAAQVIADESSRLYDAMHGLIPRLAPLVLDVFGLADALRDLVERTRVSQPQASVELHI 363 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG 459 + + L + L+R QEGL N ++H A +++ + E L ++DDG GL P Sbjct: 364 DLGDVQLGSEATLALYRAAQEGLTNALRHGQARQLSVSLHAESEGAELQVDDDGQGLAPD 423 Query: 460 ---SGQQGFGLTGMR---ERVTALGGTLHIS 484 +Q G G+R ERV ALGG L I Sbjct: 424 WREKARQDGGHYGLRWLAERVEALGGVLRID 454 >UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BKY9_9LACT Length = 351 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 15/237 (6%) Query: 271 AGIQRLRE-LNQSLQKELARNQHLAERLLETEESV----RRDVARELHDDIGQTI-TAIR 324 A I ++E L Q+LQ+ +R +++ E ET+E + R +ARELHD + Q + A+ Sbjct: 117 AKIAEMQEQLVQNLQQISSRPEYIGE---ETKEEIIELERHRIARELHDSVSQQLFAAMM 173 Query: 325 TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 + + ++ + ++Q L+E++ +R LL LRP L++ TL Q I SL++ Sbjct: 174 MLSAMNEQKEQLSPVIQQQLALVEKVINDSQSEMRALLLHLRPISLENKTLVQGIESLLK 233 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E+ + L W +DE L LFR+ QE ++N ++HA A + + Q+D+ Sbjct: 234 EL---TTKVQLSLHWELDEVTLPSTFEDHLFRIVQELVSNTLRHAKAKQLEVFLKQKDDY 290 Query: 445 LMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 ++L + DDG G + G +GL + ERV +GG I + GT + + +PQ+ Sbjct: 291 IILKLVDDGIGFDTSVSKAGSYGLKNIEERVAGMGGQCKIISIANQGTIIEIKIPQK 347 >UniRef50_B0CC26 Two-component sensor histidine kinase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CC26_ACAM1 Length = 422 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 88/253 (34%), Positives = 122/253 (48%), Gaps = 32/253 (12%) Query: 248 WRDH--PVDLLLSLLVQS--LTGLLL-------GAGIQRLRELNQSLQKELARNQHLAER 296 WR P +LL SL ++S L GL+L GA L QS + A NQ L + Sbjct: 157 WRSRGLPQELLASLQIRSALLFGLVLVFVFLMVGA----LLTERQSRTELAAANQRLRQY 212 Query: 297 LLETEESV----RRDVARELHDDIGQTITAIRTQAGIVQR-LAADNASVKQSGQLIEQLS 351 L E R +ARE+HD +G ++TA Q V +A+D A K + L + S Sbjct: 213 ALMIENQATLQERNRIAREMHDSVGHSLTAQSIQLENVDVWMASDRA--KATDHLAKARS 270 Query: 352 LG--VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV---SHLEWRIDESAL 406 LG VR + LR L +L QA+ L +E E V +HLE + Sbjct: 271 LGKEALQNVRHTVATLRNNPLQGQSLSQALSHLTQEFERTTSIQVQFSTHLEMPVPREMA 330 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFG 466 + L+R+ QE L N+ KH++A+ VT++ +Q+ L L I D+G G P GFG Sbjct: 331 A-----ALYRLVQEALTNVSKHSEATQVTIELTEQEMELSLNISDNGKGFLPEKNTTGFG 385 Query: 467 LTGMRERVTALGG 479 L GM+ER ALGG Sbjct: 386 LQGMQERTVALGG 398 >UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q2B2D2_9BACI Length = 345 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 16/228 (7%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT-QAGIVQ 331 +QRL E SL A++ H A + E R+ +AR+LHD + Q + A+ + ++ Sbjct: 125 VQRLAEERSSL----AQSAHAAAVMEE-----RQRLARDLHDVVSQQLFALSMMSSAALK 175 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 D+ K+ + I ++ +R LL LRP QL D TL I L+ E L G+ Sbjct: 176 VFDRDSEKAKKQLKEISGIAAKAQGEMRALLLHLRPIQLSDDTLCDGIIKLIHE--LRGK 233 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 + + IDE LS+ LFRV QE L+NI++HADAS + L ++++ L I D Sbjct: 234 TTID-FQASIDEIELSKAAEEHLFRVVQEALSNILRHADASKIKLTLTEKEDYTYLFIGD 292 Query: 452 DGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 DG G P + +GL MRER +GG +I GT + + +P Sbjct: 293 DGKGFDPHIERVASYGLKTMRERCEEIGGIFNIRSKQGEGTYIEIRIP 340 >UniRef50_C9PG27 Sensor histidine kinase n=2 Tax=Vibrio RepID=C9PG27_VIBFU Length = 458 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 26/225 (11%) Query: 292 HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLS 351 L ++++ ++E+ R+ V+RELHD + Q + A + + VQR +Q Q + S Sbjct: 244 QLNQQIINSQENERQRVSRELHDGVNQLLVAAKYRIDNVQR-----EQDEQRKQTELEAS 298 Query: 352 LGVYD----AVRRLLGRLRPRQLDDLTL----EQAIRSLMREMELEGRGIVSHLEWRIDE 403 V + +RR+ LRP QLDDL L E + L R +LE +V E ID Sbjct: 299 KAVMEHAIVELRRISRDLRPPQLDDLGLVAGIEAYLNDLRRRTDLE---LV--FEHDIDG 353 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP------ 457 + TL+RV QE L+N+ KHADAS V + ++ L+L I DDG G+ Sbjct: 354 VEMVAEVETTLYRVVQESLHNVEKHADASGVDVVMQREGRLLILTISDDGKGITKERLKQ 413 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRYV 500 + Q GL M+ERV A+GG +S GT + VSL +V Sbjct: 414 KTAPQDHMGLQNMKERVQAIGGQFSVSSEVGEGTEIRVSLDMEFV 458 >UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3_HALOH Length = 391 Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 115/217 (52%), Gaps = 9/217 (4%) Query: 286 ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQSG 344 +L + Q LA ++++ +E R+ VARE+HD Q+I + + + Q+L D + Sbjct: 162 DLRQKQQLAIKIIQAQEDERKRVAREIHDGPAQSIANLVFRVELAQKLMDKDLKKARNEL 221 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI--D 402 + +++L VR+++ LRP LDDL L +R + + + + I+ ++ I Sbjct: 222 EDVKELVRLSMQEVRKIIYDLRPMSLDDLGLIPTLRRYINKFNEQTKIII---DFNILGP 278 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS-G 461 + L +T+FR+ QEGLNNI KH+ AS T+ E++ ++I DDG G P G Sbjct: 279 KRRLPNTYEITIFRLIQEGLNNIYKHSKASTGTVTLEYTPEQINILISDDGIGFKPEEVG 338 Query: 462 QQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 FGL MRER LGG L + GT++ ++LP Sbjct: 339 ANKFGLVSMRERCELLGGKLDLFSEKNKGTKIKITLP 375 >UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6SXZ6_JANMA Length = 490 Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 116/222 (52%), Gaps = 11/222 (4%) Query: 284 QKELARNQ----HLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADNA 338 Q+E+ R++ L+E + +E R +ARE+HDD+G +TAI+ A + +RL ++ Sbjct: 254 QEEIIRSRAQLAELSEHVNTVKEKERTRIAREIHDDLGGNLTAIKMALALLTRRLPGKSS 313 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 + + +E L + V R+ G LRP L D L AI +E E + GI Sbjct: 314 ELLEKAAYVESLVDRTIETVHRIAGDLRPGIL-DFGLVAAIDWQSKEFEKQ-LGIPCEFV 371 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG--L 456 E L +Q LFR+ QE L NI KHA AS V++Q + + L I D+G G L Sbjct: 372 SNQAEIDLDLDQATALFRIFQEALTNIAKHAQASLVSVQLMHTPQYVRLEIIDNGRGIEL 431 Query: 457 PPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + + FG+ GM ER A+GG+L +S GT V+++LP Sbjct: 432 ADRAKPKSFGIRGMVERSVAMGGSLSVSTAPKGGTVVAINLP 473 >UniRef50_B4UAL2 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Anaeromyxobacter RepID=B4UAL2_ANASK Length = 662 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 17/235 (7%) Query: 274 QRLRELNQSLQKELARNQHLAE---RLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 +R LN++ + AR + A+ +L+ +E R+ +ARELHD+ Q++ + + Sbjct: 409 ERTHALNEAYAQLAAREEARAQLLRKLISAQEDERKRIARELHDETSQSLAVL----AMG 464 Query: 331 QRLAADNASVKQSGQLIEQLSLGVY--DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 A D ++ +L E ++ V + V R++ LRP LDDL L AIR E +L Sbjct: 465 LEAAQDAMRGGKAPRLEEVKAVAVRTLEDVHRIILDLRPSVLDDLGLLSAIRWYA-ERQL 523 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 RG+ E+ + L LFR+CQE ++NI +HA A+AV ++ +D+ + Sbjct: 524 GTRGMSVRCEFGELDRRLPPEMETALFRICQEAMSNIARHAQATAVLVEVALEDDVFRID 583 Query: 449 IEDDGSGLPPGS-----GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 IEDDG G + G++ +GL G+RER LGG+ + GTRV V +P Sbjct: 584 IEDDGRGFDAEAVARREGRRSWGLMGIRERAEILGGSATVESAPGKGTRVEVRIP 638 >UniRef50_Q1YEP3 Sensor histidine kinase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YEP3_MOBAS Length = 451 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 10/227 (4%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA-ADN 337 L L++ A L +L E +E RR +ARELHD+ GQ +TA A ++ + A Sbjct: 220 LASRLERSTAERAALMRKLFEVQEDERRTLARELHDEFGQCLTAAGAMAASLEAASPAGR 279 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR--EMELEGRGIVS 395 + + + I ++ + +R RLRP LD L LE ++R+++ E L GR Sbjct: 280 DDIAEDARAIGRMVKRMMATLRGAFVRLRPPDLDQLGLEPSLRTMLHGWEASLGGRTRFV 339 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE----RLMLVIED 451 LE D + L + + L+R+ QE L N +H A + ++ + + L + D Sbjct: 340 -LETEGDLAGLDDAAALNLYRIVQECLTNAARHGSARRIVVRVVRDSAGGAPGVELTVMD 398 Query: 452 DGSGLPPG-SGQQGFGLTGMRERVTALGGTLHIS-CLHGTRVSVSLP 496 DG G P GFG+ G+RER+ ALGGTL I G RV+ ++P Sbjct: 399 DGGGRPEALERGTGFGIAGIRERIAALGGTLSIGEAQGGIRVAATIP 445 >UniRef50_D2S9S7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9S7_9ACTO Length = 411 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 107/344 (31%), Positives = 156/344 (45%), Gaps = 53/344 (15%) Query: 184 RHLVWYLLLFVISL----WLQLGLPDELSRFTPFCLALPIIALAWHYGW---QGALIAT- 235 R V YL++ V + WL GL L ++ LA+ + W QG L Sbjct: 88 RRAVAYLVVLVAAFGLLGWLASGL-------------LFLLFLAYPHVWFAVQGTLTGIT 134 Query: 236 ------LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQR-LRELNQSL----Q 284 L +A+ + S T P DLLL V L LG I R LRE + Q Sbjct: 135 WTLLLGLASAVGPLLSATSARSPGDLLLETGVGIAFSLALGVWISRVLRESAERASLIAQ 194 Query: 285 KELARNQHLAERLLETEESV---RRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASV 340 E R++ A E E V R +A+E+HD + Q T+I A L AD + Sbjct: 195 LEATRSELAAA---ERERGVLAERERLAQEVHDTLAQGYTSIVVLAQTADALLPADPEAA 251 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 ++ +IE+++ R ++ RP LD TL +A+R L E + LE R Sbjct: 252 RERLAVIEEVARDNLAEARAVVAAFRPVALDGSTLVEALRRLAERFARE-----TGLEVR 306 Query: 401 IDESALS------ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 +D AL ++ V L R QE L N+ +HA A+AV L+ + ++ + +EDDG Sbjct: 307 VDTGALDAAPGLRRDEEVVLLRGAQEALTNVRRHAGATAVVLRLSRVGSQVSVHVEDDGV 366 Query: 455 GLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G P S GL G+R RV +GG + ++ L GTRV+V +P Sbjct: 367 GFDPASASVS-GLEGLRGRVEQVGGEVDVASLPGAGTRVTVRVP 409 >UniRef50_B8G147 Multi-sensor signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G147_DESHD Length = 779 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 25/275 (9%) Query: 236 LMNAIALIAS--QTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLR---ELNQSLQKELARN 290 ++ + +IAS +++ ++LL S+ GL LG I+ ELN+ KE+ R Sbjct: 498 VLGVLNIIASNLESFTKEDLNLLNSI------GLQLGVAIENAELWVELNK---KEMLRK 548 Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADNASVKQSGQLIEQ 349 Q L +++ +E R+ ++RELHD+ Q+I A+ +++ + D + ++ Sbjct: 549 Q-LLNKVITAQEEERKRISRELHDESSQSIAALGVGLKSVIEIMEFDKEYALTVLEDLKN 607 Query: 350 LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSEN 409 + + + +++ LRP LDDL L AIR + E L GI H+ + D L++ Sbjct: 608 NTSSILKELHQIIYDLRPSLLDDLGLLPAIRWYV-ESRLSNTGIKPHVAFTGDPLRLTDE 666 Query: 410 QRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG------LPPGSGQQ 463 +T+FR+ QE + N VK+++A + L + L + IEDDG G L G++ Sbjct: 667 TEITIFRIVQESITNAVKYSNAKNLYLGLEFGQDSLFVYIEDDGDGFNIEKALAQKDGKE 726 Query: 464 GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 FGL GM ER +GG + I +GTR+ + L Sbjct: 727 SFGLLGMTERAELIGGEIEIKSRSNNGTRIELKLD 761 >UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales RepID=B0K3K4_THEPX Length = 388 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 123/230 (53%), Gaps = 9/230 (3%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 L+++N L+ +L + L+ +++E +E R+ +ARE+HD Q + + +++ + ++L Sbjct: 155 LKKMNTQLE-QLKDKRALSVKIIEAQEEERKRIAREIHDGPAQAMANVLSKSELCEKLIT 213 Query: 336 DNASVKQSGQLIEQLSLGVYDA---VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 + ++Q+ ++ L V + VR+++ LRP LDDL L A+ ++ E G Sbjct: 214 KD--IEQAKIELKNLKNIVQQSLKEVRKIIYDLRPSALDDLGLIPALSRYIKNFS-EETG 270 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I D LS +T FRV QE L NI KH+ A +++ + ++I+DD Sbjct: 271 IFVDFSVLSDYKRLSPEIEITCFRVVQEALTNIKKHSKAKNASVKFEFGMRFISIIIKDD 330 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRYV 500 G G + QG+GL GMRER+ L G IS +GT++ +S+P R V Sbjct: 331 GIGFDKENIGQGYGLMGMRERIEILNGKFEISSFKNNGTQIYISIPVRGV 380 >UniRef50_Q89IF2 Two-component sensor histidine kinase n=2 Tax=Bradyrhizobium RepID=Q89IF2_BRAJA Length = 456 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 11/229 (4%) Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD- 336 EL L++ + L RL+E + RR +ARELHD+ GQ + AI A ++ +A Sbjct: 226 ELGTRLEEATEQRAALTRRLIEIRDDERRALARELHDEFGQNLAAILAFADTIETASAKQ 285 Query: 337 --NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE--MELEGRG 392 + Q ++I Q + + ++R L RLR ++L LE ++ +L+ + R Sbjct: 286 NREDGIAQDARMISQATHHLMASLRDALKRLRNPLPEELGLEASLVNLVDSWRSQSAARP 345 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ---QDERLMLVI 449 + L+ R D + +S T +RV QE L N ++H A ++L+ + +D+ L++ + Sbjct: 346 TI-QLDLRGDLTDISGPAATTAYRVAQECLTNALRHGAAREISLRVERRAGEDDALLIRV 404 Query: 450 EDDGSGLPPGSGQQ-GFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLP 496 EDDG G + GFGLTG+RERV A GG+L I G V+ ++P Sbjct: 405 EDDGGGDAERVARSAGFGLTGIRERVAAAGGSLSILPARGGLSVAATIP 453 >UniRef50_Q01N85 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01N85_SOLUE Length = 462 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 11/211 (5%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAI--RTQAGIVQRLAADNASVKQSGQLIE 348 Q L+ LL +E+ RR +ARELHD+IGQ+++AI T+ AD +S S I+ Sbjct: 240 QELSTLLLRAQENERRALARELHDEIGQSLSAILMETEGAECAERRADLSSHLDS---IK 296 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM-ELEGRGIVSHLEWRIDESALS 407 L+ + VR L LRP LDDL L A+ RE + G +V + ID+ L Sbjct: 297 GLAEKTVNQVRDLALLLRPSMLDDLGLAPALNWHARETSKRTGLNVVVSADDAIDD--LP 354 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGL 467 + R ++R+ QE +NN V+HA+A V + ++ ++ + + D+G+G +G GL Sbjct: 355 DEHRTCIYRLVQEAVNNAVRHANARTVDVSVRKEGHKVNVTVRDNGAGFDT-RFLRGLGL 413 Query: 468 TGMRERVTALGGTLHISCL--HGTRVSVSLP 496 GM ERV LGG L I+ GT V +LP Sbjct: 414 LGMEERVRRLGGRLKITSEPGRGTLVHAALP 444 >UniRef50_Q3BTZ2 Sensor protein n=13 Tax=Xanthomonadaceae RepID=Q3BTZ2_XANC5 Length = 710 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/236 (36%), Positives = 118/236 (50%), Gaps = 29/236 (12%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 +R+R+ +L + A Q +A+RL +E RR ++R+LHDDIGQ ITA++ A L Sbjct: 477 ERMRD---ALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAA--L 531 Query: 334 AADNASVKQSGQLIEQLSLG--VYDAVRRLLGRLRPRQLDDLTLEQAIR----SLMREME 387 +A ++ L+E +SL +R L LRP QLD L LE A+R L R Sbjct: 532 DEPDADARRE-DLLEVVSLADTTVTKLRNLSMLLRPPQLDALGLEAALRWQASMLFR--- 587 Query: 388 LEGRGIVSHLEWRIDESALSENQ----RVTLFRVCQEGLNNIVKHADASAVTLQGWQQD- 442 S + +D AL E FR+ QE L N ++HA A V L+ D Sbjct: 588 ------ASQVRLELDIQALEERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDG 641 Query: 443 ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + L + DDG G P G +G GL MRER +GGTL I GTRV++ LP Sbjct: 642 DSFRLEVSDDGDGFEP-EGPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLP 696 >UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KDL3_BACHD Length = 351 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 13/231 (5%) Query: 274 QRLRELNQSLQK---ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGI 329 +R+ E SLQ+ E A+ Q ++ TEE R+ +AR+LHD + Q + AI A I Sbjct: 120 ERVEEQVASLQRLSSERAKMQETVKKAAVTEE--RQRLARDLHDAVSQQLFAISMMTAAI 177 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME-L 388 Q L V+Q ++E+++ +R LL LRP +L+ +L+Q + L+ E+E Sbjct: 178 KQNLHEATEEVQQQMDVVEKMANTAQAEMRALLLHLRPAELEGKSLQQGVEYLLHELEQK 237 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 +G I LE +DE L + LFR+ QE ++NI++HA A V ++ WQ + ++ L Sbjct: 238 QGFKITKRLEP-MDE--LPKGVEDQLFRMLQEAISNILRHAQAHHVEVRFWQTERQVRLK 294 Query: 449 IEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + DDG G G +GL M ER+ +GG L I GT++ +P Sbjct: 295 LIDDGVGFDVQKETHGSYGLQTMHERINEIGGVLDIVSAPGKGTQLEAKIP 345 >UniRef50_A1SKV9 ATP-binding region, ATPase domain protein domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SKV9_NOCSJ Length = 485 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 107/208 (51%), Gaps = 13/208 (6%) Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSL 352 A RLL+ +E RR +ARELHDD Q +T + + A + +GQL++ ++ Sbjct: 262 FAGRLLKVQEDERRALARELHDDPLQNLTYLSRALDDLGHRA--ETPPELAGQLVDASAV 319 Query: 353 GVYDAV--RRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQ 410 AV R+++ LRP LDDL L A+R L +E+ G+ L R E L Sbjct: 320 AEDAAVALRKVIHGLRPPVLDDLGLVAALRQLAQEVRRR-TGLAVELRVRGHEVRLPPGL 378 Query: 411 RVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG-----LPPGSGQQGF 465 + +R+ QE LNN+V+HA AS V + D L L I DDG G G+ G Sbjct: 379 ELAAYRIAQEALNNVVRHARASRVEV-CVCFDRELELTITDDGLGWSEPERGDGAKASGL 437 Query: 466 GLTGMRERVTALGGTLHIS--CLHGTRV 491 GL GMRERV GGTL ++ HGTRV Sbjct: 438 GLIGMRERVNMAGGTLSVTQRSGHGTRV 465 >UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII8_THIDA Length = 493 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 14/239 (5%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G++L I R +E + AR + LA + +E R +ARE+HDD+G +T I+ Sbjct: 252 GIMLN--ITRSKEAEAEIDHSRARLRALAAHVESAKEQERLYLAREVHDDLGGNLTTIKI 309 Query: 326 Q-AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 + + ++ +++ + + + ++ L ++A R+ LRP LD + AI S ++ Sbjct: 310 GLSCLARQFPSESTPLTERVRYLDNLVDQTFEAAHRIASNLRPAALD-FGIVPAIDSQLQ 368 Query: 385 EMELEGRGIVSHLEWR--IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 GR E+R DE L + +FR+ QEGL N+ KHA A+ V L+ + Sbjct: 369 RF---GRNTEIAYEFRAPTDEIPLDSAAAIAVFRIVQEGLTNVAKHARATRVRLELVRDR 425 Query: 443 ERLMLVIEDDGSGLPP---GSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 + L L + D+G GLP G + FG+ GM ER ALGG L + + GT +S+ +P Sbjct: 426 DTLHLTLTDNGRGLPAAPNGMARPVFGILGMSERAAALGGQLVVRPAPDQGTELSLRIP 484 >UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JH43_BURP8 Length = 493 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 284 QKELARNQHLAERLLETE---ESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV 340 K L + +H+ E TE E ++ +ARELHDD+GQ +TA++ A I+Q+ Sbjct: 265 HKRLEQLEHVGELAAATERAREEEKKRIARELHDDLGQQLTALKMSAVILQQDVEAGHYT 324 Query: 341 KQSGQLIEQLSLGVYD---AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 ++ L + D A+RR+ LRP LDDL L A+ L E GI + Sbjct: 325 AETAAKARGLVVQADDTMSALRRIASNLRPTMLDDLGLLPAVEWLADEFSRR-YGIKAST 383 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL- 456 E A S+ +FR+ QE L N+ +HA A+ V + D + I+D+G G Sbjct: 384 RLSAGELAFSDTASTAIFRIVQEALTNVARHACATEVVVTIELDDNACEVRIDDNGRGAA 443 Query: 457 -PPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 PG FGL G+RERV L GT+ + G RV + P Sbjct: 444 SAPGDKPDSFGLLGIRERVRQLNGTVSLGNRLDRGFRVQIRFP 486 >UniRef50_Q9RPF0 Histidine kinase ChrS n=2 Tax=Corynebacterium diphtheriae RepID=Q9RPF0_CORDI Length = 417 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 124/241 (51%), Gaps = 27/241 (11%) Query: 274 QRLRELNQSL---QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAI----RTQ 326 Q R+L L Q++LA ++H A RL E R ++RE+HD + Q +++I R Sbjct: 178 QHYRQLAAELLAAQQDLATSEHQAGRLEE-----RERLSREIHDTVAQGLSSIVILARAA 232 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD---LTLEQAIRSLM 383 G + + + V Q +IE + RR + L L D + L I +L Sbjct: 233 HGRLDK--GEIEDVAQQLSVIETQASDSLAEARRFVRDLAAPALGDSLPIALTSTINNLR 290 Query: 384 REMELEGRGIVSHLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADAS--AVTLQGWQ 440 + + G + HLE D S +L E T+ RV QEGLNN+VKHA A+ VTL W+ Sbjct: 291 TKQDALGAPLDVHLELVGDTSISLPEPVSRTVVRVTQEGLNNVVKHAHATKAVVTLGVWE 350 Query: 441 QDERLMLVIEDDGSGLPPGSGQQ----GFGLTGMRERVTALGGTLHI-SCLHGTRVSVSL 495 + L +V D+G G PG+ ++ GFGL G+R+RV +GGTL I S +GT ++ + Sbjct: 351 DEVSLDVV--DNGIGFNPGTTERGTSSGFGLDGLRKRVDTVGGTLVIESDTYGTALACRI 408 Query: 496 P 496 P Sbjct: 409 P 409 >UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF3_DESMR Length = 704 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 12/216 (5%) Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIR-TQAGIVQRLAADNASVKQSGQLIEQLS 351 L+ RL++ +ES R +AR+LHD++ Q +++++ ++ LA +A+++Q + L Sbjct: 474 LSGRLMQAQESERASIARDLHDNVAQDLSSLKIAYETLLDGLADVDAALRQRLEAASGLL 533 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 +VR L LRP L+ L L+QA+R L +EM VS+ ++ + + Sbjct: 534 ARTIASVRELAYGLRPPNLEHLGLDQALRRLSQEMGQASGLAVSYAGVGLEGLDVDADVA 593 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL---------PPGSGQ 462 + LFR+ QE L N+ KHA AS V ++ + +L+L I DDG G P + + Sbjct: 594 INLFRIAQEALANVRKHAGASRVEMRLIESYPKLILRIRDDGRGFDAVREHGDCPGEASR 653 Query: 463 QGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 GL MRER GG+L + S HGT V +P Sbjct: 654 PCMGLINMRERAGLFGGSLRVISSPGHGTTVVAEVP 689 >UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinase n=24 Tax=Burkholderia RepID=C5AIA0_BURGB Length = 769 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 124/243 (51%), Gaps = 32/243 (13%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-A 327 L A + LREL+ +LQ+ + EE R +ARELHDD+GQ +TA++ + Sbjct: 534 LKASREELRELSANLQR------------VREEEKTR--IARELHDDLGQQLTALKMDLS 579 Query: 328 GIVQRLAAD-----NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 + RL D +ASV + + + +L +VRR+ LRP LDDL L AI L Sbjct: 580 AVEHRLLRDGTGEAHASVVEPLREMRRLIDATVASVRRIAADLRPVMLDDLGLVPAIEWL 639 Query: 383 MREMELEGRGIVSHLEWRIDESALS-ENQRVT-LFRVCQEGLNNIVKHADASAVTLQGWQ 440 + GI +E RID + N T LFR+ QE L N+ +HA+AS V L Sbjct: 640 ANDF-TNRYGI--EVERRIDPGDVRFPNATATALFRIVQEALTNVARHAEASHVALTLGI 696 Query: 441 QDERLMLVIEDDGSGLPPGSGQ-----QGFGLTGMRERVTALGGTLHISCL--HGTRVSV 493 +D + +L I DDG G G+ + FGL G+RER LGGT+ + G +++ Sbjct: 697 EDRQCVLRIVDDGVGADQADGRRAPDDKSFGLLGIRERAHMLGGTVRMETARNQGYALTI 756 Query: 494 SLP 496 ++P Sbjct: 757 TIP 759 >UniRef50_B8ET68 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Rhizobiales RepID=B8ET68_METSB Length = 471 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 10/217 (4%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 +L +L+ LA L RL+ ++ R +ARELHD+ GQ + AI A + A Sbjct: 229 FNDLAGNLETTLAERNALTRRLIAVQDEERLHLARELHDEFGQCLAAIGAMAASAGQTAR 288 Query: 336 -DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 D +++ Q I + + + A+R L RLRP +++L L ++ L+ G Sbjct: 289 RDCPALEPPCQSIGRTAAHMMQALRGALLRLRPPDVEELGLAASLEGLVAGWNGRGGATR 348 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL-------QGWQQDERLML 447 +E R D AL + +L+RV QE + N KHA+A+ VTL QG + + L Sbjct: 349 FSIELRGDFDALPRDFAASLYRVAQEAITNAAKHAEAAKVTLRLSLREPQGSDRRAHIEL 408 Query: 448 VIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHIS 484 ++DDG G + G GL GMRERV ALGG L + Sbjct: 409 AVDDDGKG--GADAKSGMGLLGMRERVEALGGRLSLK 443 >UniRef50_A9WKI6 ATP-binding region ATPase domain protein n=3 Tax=Chloroflexaceae RepID=A9WKI6_CHLAA Length = 791 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 114/233 (48%), Gaps = 21/233 (9%) Query: 283 LQKELA-RNQHLAER----LLETEESV----RRDVARELHDDIGQTITAIRTQAGIVQRL 333 LQ+E+ R Q L+ER L + E+ R +AR+LHD I Q + +I A Q L Sbjct: 149 LQQEIEERAQQLSERQSLLLAQLREAAAQEERNRLARDLHDTIKQQLFSINIAAATAQSL 208 Query: 334 AA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 D Q Q + LS ++ LL +LRP+ L + L +AIR + + R Sbjct: 209 YERDPVGAAQHIQHVRDLSQAAMAEMKALLTQLRPQPLATIGLIEAIREQLEALHF--RA 266 Query: 393 IVS---HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ----DERL 445 VS H + DE+ L + T+FRV QE L+N+ +HA A V + Q+ L Sbjct: 267 EVSTALHHDGFPDEALLLPGTQETVFRVIQEALSNVARHARARHVQVSFGQEMVAGRSWL 326 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI-SCLH-GTRVSVSLP 496 + + DDG G P + G G+T MR R+ ALGG L + S H GT + +P Sbjct: 327 TVTVADDGRGFDPATSTLGMGMTNMRARIEALGGELAVRSAPHAGTTIQFRIP 379 >UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67JE7_SYMTH Length = 477 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/243 (33%), Positives = 129/243 (53%), Gaps = 20/243 (8%) Query: 266 GLLLGAGIQRLRELNQS----LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 G L A Q +R+L ++ ++KE AR + L +++L +E R ++RELHD++GQ +T Sbjct: 231 GHLAEAFNQMVRDLARTRALVVRKEAAR-KALLQKVLTAQEEERARISRELHDEVGQALT 289 Query: 322 AIRTQAGIVQRLAADNASVKQSGQL--IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + IV + ++ Q+ + L+ G ++VRRL LRP LDD+ L AI Sbjct: 290 GL-----IVGLRVLEEGDAERQSQVTYLRDLAAGTLESVRRLSRDLRPAVLDDIGLVAAI 344 Query: 380 RSLMREMELEGRGIVSHLEWRIDESA-LSENQRVTLFRVCQEGLNNIVKHADAS--AVTL 436 R + GI ++ DES L TL+R+ QE L N+ +H+ A + L Sbjct: 345 RRYAGDFA-RYHGIEGTVQVVGDESVRLPPVVETTLYRITQEALTNVARHSQARHFGIVL 403 Query: 437 QGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGG--TLHISCLHGTRVSVS 494 D RL VIEDDG G PG+ ++G GLTG+ ER+ + G T+ S GT + ++ Sbjct: 404 DLRGPDVRL--VIEDDGRGFDPGAPREGTGLTGISERLALVSGRMTIESSPESGTTLFIA 461 Query: 495 LPQ 497 +P+ Sbjct: 462 VPR 464 >UniRef50_C4ZL16 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=C4ZL16_THASP Length = 418 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 105/217 (48%), Gaps = 8/217 (3%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 LQ+ L + A L + E RR +ARE+HD +GQ +TA++ +V R + Sbjct: 199 ELQRALGEIEAFAHGLDRSIEDERRRLAREVHDQLGQLLTALKM---MVHRALQGAPGRE 255 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 Q IE + VRR+ LRP LDDL LE A+ R+ E G+ + + Sbjct: 256 QDWPQIEAVLGEGIATVRRISAALRPPLLDDLGLEAALGLAGRQF-AERTGLACEVAL-V 313 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG 461 D LS +Q L+R+ QE L N+ +HA A V ++G D L +EDDG G+ P Sbjct: 314 DAGQLSADQANQLYRIAQEALTNVARHAQARRVRVEGVAVDGEYRLAVEDDGVGMAP-QA 372 Query: 462 QQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 + GL MRER GG LH+ G R+ +P Sbjct: 373 RSSLGLLSMRERAALAGGELHVGSGAGGGVRIEARVP 409 >UniRef50_B4RWI3 Sensor histidine kinase n=2 Tax=Alteromonas macleodii RepID=B4RWI3_ALTMD Length = 447 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 7/223 (3%) Query: 274 QRLRELNQSLQKELAR-NQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 Q+L+ + +K+L + ++ LA LL+ +E R +ARELHD++GQ +T I+ A I+ Sbjct: 215 QQLKSALDAKEKQLIKIDKQLA--LLQEQE--RNYLARELHDNVGQLLTTIKAHAYILVN 270 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 + + V+ S Q ++ +S + DA+R+L L P LD ++L+ ++ L+ E E+ G Sbjct: 271 -TKERSVVELSAQKVQVMSHQISDAIRKLTAHLHPLVLDRVSLQASLERLVYEQEVAQPG 329 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 + + + + L+R QE +NN++KHA A+ V++Q + + + ++D+ Sbjct: 330 TQWDVSINLKRYQEDTERDIHLYRFVQEAINNVIKHAKATKVSIQIFGDTHSVTVTVKDN 389 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 G GL + G++ MR R +G ++ V+VSL Sbjct: 390 GRGL-GNHIVENIGMSSMRSRARCIGANCSVASPDEGGVAVSL 431 >UniRef50_Q97F15 Membrane-associated sensory histidine kinase-like ATPase n=1 Tax=Clostridium acetobutylicum RepID=Q97F15_CLOAB Length = 402 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 25/237 (10%) Query: 274 QRLRELNQSLQ---KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGI 329 RLRE + L+ ++L R E L E R ++RE+HD +G T++A+ Q + Sbjct: 167 DRLRESEEKLRGAYEKLERYSETVEELSILRE--RNRISREIHDSVGHTLSAVLMQLQAL 224 Query: 330 VQRLAADNASVKQSGQLIEQLS---LGVYDAVRRLLGRLRPRQLDDL----TLEQAIRSL 382 + + +D ++S + +E+++ G + VRR + L+P D +E+ IR Sbjct: 225 LYLIKSDK---EESLKTVEEMTGFVRGGIENVRRTVRELKPTDFDRFEGVFAIEEMIRKY 281 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 + + R I+S ++ +LS ++ +RV QE LNN ++H AS V + Sbjct: 282 KKLTSADIRFILSK-----EKRSLSSDESFISYRVVQEALNNAIRHGKASLVEVSMQFNQ 336 Query: 443 ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 +RL + I+D+G G ++GFG+TGM ERV LGG + G V+V+LP+ Sbjct: 337 DRLYIRIKDNGVG--TDGIKKGFGMTGMEERVKKLGGNIEFYSERDKGFEVTVNLPK 391 >UniRef50_B2J2K6 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Cyanobacteria RepID=B2J2K6_NOSP7 Length = 419 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 107/221 (48%), Gaps = 10/221 (4%) Query: 283 LQKELARNQHLAERLLETEESV----RRDVARELHDDIGQTITAIRTQAGIVQRL-AADN 337 LQ E+ NQ L + L E+ R +ARE+HD +G T+ A Q ++N Sbjct: 195 LQLEIT-NQQLCQYALRIEDQATLQERNRIAREIHDGLGHTLVAQTIQINNTLLFWESNN 253 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 + ++L +RR L LR L +L+ AI L+ + + GI Sbjct: 254 DKALTFLKQAKELGAEALLEIRRSLSLLRSNPLQGQSLQSAIEKLLTDFH-QTTGIEPSC 312 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + + + +E L+R+ QE L NI KHA A++VT++ + + L IED+G G Sbjct: 313 KIDVPHTLPTEIN-TALYRIVQESLTNICKHAQATSVTVRLLARTGMIHLSIEDNGKGFN 371 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHISCLHGTR--VSVSLP 496 P GFGL GMRER ALG L++ GT +SVSLP Sbjct: 372 PTQNTTGFGLQGMRERAVALGAQLNLQSQLGTGCCISVSLP 412 >UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID=D1VK31_9ACTO Length = 459 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 8/229 (3%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESV-----RRDVARELHDDIGQTITAIRTQA 327 I L E N+ LQ + N L +LL R +A E+HD + Q + I TQ Sbjct: 202 IAELAETNRQLQASMDENAGLHAQLLTQAREAGVAEERGRLAGEIHDTLAQGLAGILTQL 261 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 +R AD A + +L + L+ RR + LRP QL+ +L A+ L R+ Sbjct: 262 EAARRAHADPAEWSRHIELADGLARANLTEARRSVRALRPEQLEQASLSDALADLARDWS 321 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + + A +E + + +FR+ QE L N+ +HA A+ + D+ L+L Sbjct: 322 RRTQVPAEAVTTGVPVRAPAETE-MAVFRIAQEALANVARHAHATRARVTLSYLDDTLLL 380 Query: 448 VIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLHGTRVSVS 494 + DDG+G PG+G FG+TGMR R ++ GTL I G +V+ Sbjct: 381 DVADDGAGFHPGAGAPPARFGVTGMRRRAESVAGTLSIESAPGDGTTVN 429 >UniRef50_Q5WK46 Two-component sensor histidine kinase of nitrate reduction n=3 Tax=Bacillales RepID=Q5WK46_BACSK Length = 359 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 8/221 (3%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV 340 Q Q+ L RN H+ + +++ +E R+ ++RELHD + Q + + +V+ + + Sbjct: 130 QKTQEMLQRN-HMLKYVIKAQEDERKRISRELHDSVAQELLSSLVDLRVVKYMDVGEDVL 188 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 K+ Q EQ + D +R L LRP LDDL LE A RS + ME + G++ Sbjct: 189 KKL-QHTEQSLTRLLDDIRHLAVELRPSSLDDLGLEAAFRSHFKWME-KNYGLLVKFSAE 246 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP--- 457 + + ++RVCQE + N +K+A+ V ++ ++ +L LV+ D+G G Sbjct: 247 LAAARYGSEIETVVYRVCQEAVLNALKYAETDEVYVRLCEEHGQLQLVVRDEGVGFDMVI 306 Query: 458 PGSGQQGFGLTGMRERVTALGG--TLHISCLHGTRVSVSLP 496 + G GL GMRER +GG T+H + GT V +S+P Sbjct: 307 NEAKGTGLGLYGMRERTELVGGQFTIHSAVGEGTTVQLSIP 347 >UniRef50_C4ZM16 Multi-sensor signal transduction histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=C4ZM16_THASP Length = 484 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 85/256 (33%), Positives = 122/256 (47%), Gaps = 32/256 (12%) Query: 261 VQSLTGLLLGA--GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQ 318 V++ T L+G + R ++L+ AR + ++ R+L+ +E+ RR VA ELHD IGQ Sbjct: 233 VEAATPRLIGTVHDVTAQRAAAEALRTANARLRQMSLRVLDAQEAERRAVAYELHDQIGQ 292 Query: 319 TITAIR---------TQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPR 368 +TA++ AG V RLAA + +++ + LSL LRP Sbjct: 293 ALTAVKLDLQAMTPHLDAGPAVARLAAAIHTTEEALAQVRGLSLN-----------LRPP 341 Query: 369 QLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKH 428 QLD + LE ++R E E G+ + E E + FR+ QE L N+V+H Sbjct: 342 QLDYMGLEASLR-WHAERECARAGLALDFAGSVGEFKAEERCAIVCFRLLQEALTNVVRH 400 Query: 429 ADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLH 482 A A V + D RL L I DDG G ++ GL GM ER +GG +H Sbjct: 401 AAAKRVRIALSAADGRLDLEIADDGRGFDLARARRRMLEGASVGLLGMEERAALIGGEVH 460 Query: 483 ISCL--HGTRVSVSLP 496 I GTR+ VSLP Sbjct: 461 IDAAPGAGTRIRVSLP 476 >UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C419_SPHTD Length = 437 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 16/240 (6%) Query: 271 AGIQRLRELNQSLQKEL-ARNQHLAERLLETEESV---RRDVARELHDDIGQTITAIRTQ 326 A I R + + L EL A LAER E + V R+ +ARE+HD + Q T+I Sbjct: 180 AAITRQSQERKRLIDELMATRAALAER--ERQAGVIEERQRLAREIHDTLAQGFTSIVMH 237 Query: 327 AGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 + + A+ ++++ + + + RRL+ LRP QL+ + + E Sbjct: 238 LEAAEPHIPAEATALRRHVEQARATARDSLNDARRLVWALRPEQLEQGGSLADALARVAE 297 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 E GI +H+ L + VTLFR+ QE L N+ KHA A V + D+ + Sbjct: 298 RWSEDTGITAHVTVDGTPVPLPPDVEVTLFRITQEALANVRKHAQAGRVDITLSYLDDEV 357 Query: 446 MLVIEDDGSGLP-------PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 +L ++DDG G PGS GFGLTGMRER+ LGG+L I GT ++V+LP Sbjct: 358 LLDVQDDGVGFDRATVSATPGSVNGGFGLTGMRERLRLLGGSLMIESAPGEGTSITVALP 417 >UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV3_9PROT Length = 401 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 113/216 (52%), Gaps = 13/216 (6%) Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADNASVKQSGQLIEQLS 351 L+ + +E R +ARE+HD+IG +TA++ A + QR +D+ ++++ Q++ L Sbjct: 184 LSSHIENIKEEERTRIAREIHDEIGVLLTALKMDLAWMRQRFPSDDGALQEKSQVMANLL 243 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR-GIVSHLEWRIDESALSENQ 410 A L+ LRP LD + AI + E R + D +S+ Q Sbjct: 244 DTAGIAANNLVHSLRPGSLDCFGIVAAIE--IEATEFTKRTATPCKIIKSSDNLDVSDEQ 301 Query: 411 RVTLFRVCQEGLNNIVKHADASAVTLQGWQQ-----DERLMLVIEDDGSGLPPGSGQQ-- 463 +TLFRV QE LNNI+KHA A V ++ Q D+ + L++ DDG G + + Sbjct: 302 SITLFRVFQETLNNIMKHAQARRVQVKISQSATDQIDKYVELIVSDDGCGFDEAARNKPR 361 Query: 464 GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 FGL G++ER+ L GTL I+ GT+++V LP+ Sbjct: 362 SFGLRGIQERIRQLDGTLSITSRPGKGTKIAVRLPK 397 >UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N2_NITMU Length = 692 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 17/230 (7%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 + Q L+ A + A L E R+ +ARE+HD++GQ + A+ + ++ R A D+ Sbjct: 429 VEQELRVRDAAIREFAAHLERMREEDRKYIAREIHDELGQLLAALHLEISLL-RSAKDHG 487 Query: 339 SVK------QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 S + +L+E+ V++ L RP L L +E A+ L E + + G Sbjct: 488 SERLETIRHNMAELVEKAGQSVHNVAEHL----RPASLG-LGIESALTKLTSEFK-KHTG 541 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I L + L E+Q V +FR+ QE L N+ +H+ A+ V ++ +++ + +++ I D+ Sbjct: 542 IYCDLRLPEEPVNLDEDQTVAIFRIVQESLTNVTRHSGANRVEIRLFREKDEVIVEICDN 601 Query: 453 GSGLPPGSGQQG--FGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQR 498 G G P S ++G FGL GMRER AL G + I+ G V VS+P R Sbjct: 602 GRGFDPESAKKGKSFGLVGMRERAAALRGYIAITSGPGQGALVRVSIPLR 651 >UniRef50_C2Z9I7 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Bacillus cereus group RepID=C2Z9I7_BACCE Length = 713 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 143/293 (48%), Gaps = 26/293 (8%) Query: 215 LALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ 274 + PI+ + G QGA+I N L ++ ++ L +++ S LL + Sbjct: 421 ICFPILI---YQGMQGAIIIGEKNDYTL-----FKPQEINELEEVVINSANLLL---SVN 469 Query: 275 RLRELNQSLQKELARNQH---LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 L + ++K + Q+ +++++ ES R+ ++ LHD+I Q + + ++Q Sbjct: 470 TLNSNKKEIRKAKVKAQNWKQFNYQIIQSLESERKRLSIFLHDEILQILILQLNEIRMLQ 529 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 N S+ + EQL +Y ++R++ L P ++DL LE ++ +L RE EL R Sbjct: 530 --TKRNFSIDILNSMDEQLEDIIY-SIRKMCHNLHPIIVEDLGLEASLHTLKREFELNYR 586 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 I+ H+++ LS+N + ++R+ +E LNN +KH+ + V + ++ + +ED Sbjct: 587 -ILIHIQFNCKLKILSKNIEIQIYRIIKELLNNAIKHSKGNNVQIHIIEERGCYVCTVED 645 Query: 452 DGSG------LPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 DG G S GL ++ +++ L G L IS HGT V+ ++P Sbjct: 646 DGIGFCVPNSFSEFSTSNHLGLMTIQRQISELNGNLRISSEKEHGTLVTFTIP 698 >UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulator histidine kinase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Z0_DESAH Length = 708 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 114/214 (53%), Gaps = 7/214 (3%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 Q++++ L+K + + L+ ++E E R +ARELHD +GQ +TA++ A ++R Sbjct: 477 QQVQKRTVELEKVQDKLRKLSGSIMEAHEIERGALARELHDHLGQVLTALKIDAVWIERF 536 Query: 334 AA--DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 + D + ++G++ + + D VR++ RLRP LDDL L +A+ SL + E R Sbjct: 537 LSPRDPDAAVRAGRISSLIDDTIGD-VRKMAFRLRPGVLDDLGLVEALESLT--GDFEER 593 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 ++ L + L+R+ QE L N ++H+ AS V L +L+L I+D Sbjct: 594 SDITCLFQAAALPDIDSTLATALYRIAQEALTNAIRHSRASIVALTLAMDQGKLVLKIKD 653 Query: 452 DGSGLPPG--SGQQGFGLTGMRERVTALGGTLHI 483 +G G + QGFGL GM+ER T GG L I Sbjct: 654 NGVGFAFDDINENQGFGLAGMQERATLAGGVLEI 687 >UniRef50_B8FDP4 Histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP4_DESAA Length = 610 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 15/225 (6%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR-TQAGIVQRLAADNAS 339 ++LQ +R Q+L+ +L+ T+E RR +A ELHD IGQ++TA++ + I+ + + + Sbjct: 382 KALQASESRLQNLSSKLILTQEEERRQLAIELHDGIGQSLTAVKFSVDNILLNIDNPDLN 441 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 V+ + Q+ VRR+ LRPR LD+L + I RE + I +H+ Sbjct: 442 VRDITKTASQIIKASIADVRRMQVELRPRILDELGIIATINWFCREF----KSIYTHINL 497 Query: 400 RID----ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 I+ E +S + +FR+ QE NN K+ + ++L ++D RL L I D+G G Sbjct: 498 NINVDVEEEQVSAQLKPAVFRIIQEAFNNAAKYFEGDEISLSFTERDGRLHLEIRDNGIG 557 Query: 456 ------LPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVS 494 L +G GL MRER G L I G ++ Sbjct: 558 FDLDEVLSSRELNRGLGLDSMRERAELCNGHLEIISSKGQGATIK 602 >UniRef50_C6QDW8 Histidine kinase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QDW8_9RHIZ Length = 490 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 33/248 (13%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 ++ L SL + A N L +++ +E RR++ARELHD+ G + I A + R+ Sbjct: 232 RKFNSLAASLDQTRAENGELYKQIQSVQEDERREIARELHDEAGPCLFGITASAESINRI 291 Query: 334 AA--DNASVKQSGQLIEQLSLGVYDAV----RRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + D+ S ++ +++ L + D + R LL RL P + + L I+ L+ + + Sbjct: 292 SIKLDDESARRITTRTDEI-LSIADRLKAMNRALLKRLHPVSIGKVPLPALIKDLINDFD 350 Query: 388 LEGRGIVSHLEWRIDES------ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 H + RI A +E +T++R QE L N V+HA A + ++ ++ Sbjct: 351 RR------HTDVRIISEIGPFARAYAEKIELTVYRATQEALTNAVRHAQADNILIELREE 404 Query: 442 DER-----------LMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--G 488 R + L + DDG G PG+ GFGL+ MRERV + GGTL + + G Sbjct: 405 SSRAGSREQEPGILICLRVSDDGVGFKPGAA-AGFGLSAMRERVLSAGGTLAVEARNPRG 463 Query: 489 TRVSVSLP 496 T +++ +P Sbjct: 464 TSIAIKIP 471 >UniRef50_C3RLD8 Two-component system sensor histidine kinase n=3 Tax=Bacteria RepID=C3RLD8_9MOLU Length = 439 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 17/236 (7%) Query: 274 QRLRELNQSLQKELAR----NQHLAERLLETEE----SVRRDVARELHDDIGQTITAIRT 325 ++RE N+++ KEL+ N+ L + TE+ + R+ +ARE+HD +G +T I Sbjct: 204 NQIRE-NENISKELSMINEVNKQLKDYAAVTEKIGESNERKRLAREIHDTLGHALTGI-- 260 Query: 326 QAGI---VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 AGI + + D KQ ++ ++ VRR L +LRP L++ TL++AI+ + Sbjct: 261 AAGIDACIAMIDIDPNVTKQQLLVVSKVVREGISDVRRSLNKLRPGALEEHTLKEAIQKM 320 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 ++E + + L++++D+ + +FR+ QE + N ++H A V + +Q+ Sbjct: 321 IKEFS-DVSEVEIMLDYQLDKVDFENTKEDIIFRIVQESITNALRHGRAKKVEINIYQRV 379 Query: 443 ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 L +VI D+G G + G+GL M+ER L G L G V V++P + Sbjct: 380 SDLEIVIADNGVGCD--DLKLGYGLKQMQERAAILNGRLEYYSKEGFTVKVTIPMK 433 >UniRef50_A5EGA4 Bacteriophytochrome n=13 Tax=Rhizobiales RepID=A5EGA4_BRASB Length = 783 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 30/255 (11%) Query: 271 AGIQRLRELNQSLQKELARNQHLAE---------------------RLLETEESVRRDVA 309 A QR L L + LA+++ LA R + +E+ R+ +A Sbjct: 529 AARQRQERLTSELNERLAQSERLARALRKETELRAAVEGDLTQVLRRTVADQETERQRIA 588 Query: 310 RELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQ 369 RELHD +GQ++T ++ + A ++Q I+ ++ + V R+ +RP Sbjct: 589 RELHDTLGQSLTMLQLGLQAIGHEIAGGPKLQQRFDGIKTIADSLGRDVHRIATEIRPSA 648 Query: 370 LDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHA 429 +DDL L++AI SL+ E E + +L + L + TL+RV QE L N+V+HA Sbjct: 649 IDDLGLQKAIESLL-ETWSENAALNYYLHLSPKDMRLPKAIEATLYRVLQETLTNVVRHA 707 Query: 430 DASAVTLQGWQQDERLMLVIEDDGSGLPP------GSGQQGFGLTGMRERVTALGGTLHI 483 +A V + D + +++EDDG G P S GL G+RER+ +GG+L I Sbjct: 708 EARKVGVILNVTDREVSMIVEDDGRGFPADADDPTASPAMRLGLLGIRERLALVGGSLEI 767 Query: 484 --SCLHGTRVSVSLP 496 S GT V +P Sbjct: 768 ESSPGRGTTVFARVP 782 >UniRef50_A7LKW0 Methanol utilization control sensor n=1 Tax=uncultured Methylophaga sp. RepID=A7LKW0_9GAMM Length = 361 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 8/230 (3%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 +L N K L +N+ L + + + E+ R +A ELHD GQ + AI A + + Sbjct: 131 KLEMQNADNAKLLLQNRALIKHITQVREAERNHLASELHDVFGQYLAAIDVNASVAIKYK 190 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 ++ ++ + I+ + + + R L L+P L+ + L AI L+ + ++ Sbjct: 191 TEDPKLQAILKTIQDSASFLRNVTRSQLRSLKPPGLETVGLSAAIEDLIGQWQMSFPDYE 250 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA-----VTLQGWQQDERLMLVI 449 ++ +D+ + + +T++R QE L NI +HA+AS+ +T Q + L I Sbjct: 251 INIAIEVDDQLVDYDTALTIYRSLQEALTNITRHAEASSIHIDLITQNKSAQRNDISLTI 310 Query: 450 EDDGSGLPPGSGQ-QGFGLTGMRERVTALGG--TLHISCLHGTRVSVSLP 496 D+G G P G G GL G+RERV AL G LH + GT +++ +P Sbjct: 311 RDNGIGFDPNEGMGNGLGLIGIRERVHALNGQFNLHPADPKGTVLALHIP 360 >UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacillus cereus group RepID=Q81FX4_BACCR Length = 351 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 7/196 (3%) Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV-KQSGQLIEQLSLGVYDAVRRLLG 363 R +ARELHD + Q + A+ + + V K+ QL+E + + +R LL Sbjct: 150 RHRLARELHDSVSQQLFAMSMMMSAINEQITEFPDVTKKQLQLVENMVVNAQSEMRALLL 209 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP QL+ L + I L+ E+ R +EW I+ L + LFR+ QE L+ Sbjct: 210 HLRPVQLEGKKLTEGIEELLTEL---SRKQHMKIEWLIEPIELKKGVEDHLFRIVQEALS 266 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLH 482 N ++HA A ++ + D+ +L I DDG G G + G +GL M+ERV +GGTL Sbjct: 267 NTLRHAKAKKTEVRLRKIDQYAILKIIDDGVGFEVGVNKAGSYGLRSMQERVHEIGGTLK 326 Query: 483 ISCL--HGTRVSVSLP 496 + GT++ V +P Sbjct: 327 VLSFPAKGTQIEVKVP 342 >UniRef50_UPI00016AFAA4 response regulator/sensory box histidine kinase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA4 Length = 672 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 118/237 (49%), Gaps = 36/237 (15%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-- 331 + LR L+ +QK + EE R +ARELHDD GQ +TA++ +++ Sbjct: 448 EELRRLSAHIQK------------IREEEMAR--IARELHDDFGQQLTALKMAVTLLEHK 493 Query: 332 ------RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 RL + N + LI+QL ++VRR LRP LDDL L AI L+ E Sbjct: 494 KPAGPERLISRN-DLSSIYALIDQL----INSVRRFAADLRPAMLDDLGLIPAIDWLIEE 548 Query: 386 MELEGRGIVSHLEWRIDESALSENQ--RVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 R V H+ ID A+ N+ RV +FR+ QE L N+ +H+ A+ V + + D Sbjct: 549 --FSARYHV-HVTRHIDAQAIHFNRESRVGVFRIVQEALTNVARHSAATEVVIDITRDDS 605 Query: 444 RLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLHGTR--VSVSLP 496 ++ I D+G G S G++ FGL GMRER LGG I G ++V+LP Sbjct: 606 HCIVRIADNGRGAVRDSSLGRRSFGLLGMRERAALLGGDTQIRTSPGAGFVLTVTLP 662 >UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinase n=3 Tax=Nitrosomonas RepID=Q0AF09_NITEC Length = 498 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 111/215 (51%), Gaps = 17/215 (7%) Query: 280 NQSLQKELARNQHLAERL----LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 N+ ++ E+AR++ E L + +E R +ARE+HDDIG T+TAI+ + +V L Sbjct: 260 NKQIELEIARSRAQLEELSAYSQKAKEQERTRIAREIHDDIGGTLTAIKCE--LVPCL-- 315 Query: 336 DNAS-----VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 DN+S + +E L V D+ RR+ LRP LD + A++ RE + Sbjct: 316 DNSSRAPEFYRNKAAAVESLVDMVIDSTRRIALDLRPGVLD-CGIVAAVQWQAREFN-QR 373 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI + +E +L + V +FRV QE L NI KHADAS V ++ + + L + Sbjct: 374 TGIACAVVCDDEEISLDGDLAVAIFRVFQEALTNIAKHADASEVRVKLSEASGEVYLEVA 433 Query: 451 DDGSGL--PPGSGQQGFGLTGMRERVTALGGTLHI 483 D+G G+ P FG+ MRER LGG HI Sbjct: 434 DNGCGITYPDMEKVNSFGIRSMRERCQQLGGRFHI 468 >UniRef50_C0Z627 Two-component sensor histidine kinase n=3 Tax=Bacillales RepID=C0Z627_BREBN Length = 382 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 13/223 (5%) Query: 282 SLQKELARNQHLAERLLE---TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 SLQ+ N LAE+L TEE R+ +ARELHD + Q + AI ++RL N Sbjct: 156 SLQRLSNHNAALAEQLKHAAVTEE--RQRLARELHDAVSQQLFAIAMTTAAMKRLVEKNP 213 Query: 339 S-VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 Q +L+E+++ +R LL LRP L + +L++AI L+ E+ R L Sbjct: 214 QRAAQQIELVEEMAAAAQAEMRALLLHLRPATLQNKSLKEAILELLDEL---TRKNTMQL 270 Query: 398 EWRIDE-SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 W I++ L LFR+ QE L+N ++HA A+ + ++ + E++ L + DDG G Sbjct: 271 TWEIEDVEGLPSGIEDHLFRILQESLSNTLRHARATQIAVKLFTLQEQVRLRVTDDGVGF 330 Query: 457 -PPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 P G +GL M+ERV +GG++ I GT++ V +P Sbjct: 331 DPDGEKMTSYGLRSMQERVAEVGGSMEIYSAIGKGTQIEVRIP 373 >UniRef50_A2SCN1 Two-component sensor histidine kinase-like protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN1_METPP Length = 488 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 123/210 (58%), Gaps = 7/210 (3%) Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN-ASVKQSGQLIEQLS 351 L ERLL+ E RR +ARELHD++GQ++ A+ +A +V LA + ++ S + + + Sbjct: 271 LTERLLQVREEERRRLARELHDEMGQSLAALWAEAEVVSTLAGQSLPQLRPSADAMSRTT 330 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM---REMELEGRGIVSHLEWRIDESALSE 408 + + ++R+L LRP LD L QA+++L+ R +G + + LE D + + Sbjct: 331 EHLLEGLQRVLSDLRPPALDRFGLAQALQALVAQPRRRAAQG-DLHATLEIDGDTERIPD 389 Query: 409 NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLT 468 + RV ++R+ QE L N V+H DA+ ++ + ++ + + D+GS + G GL Sbjct: 390 SMRVHVYRIVQEALTNAVRHGDAAQARVRLACTERQVSIEVTDNGSHVGVAVPVPGHGLL 449 Query: 469 GMRERVTALGGTLHIS-CLH-GTRVSVSLP 496 GM ERV+ALGGTL ++ CL G R++V+LP Sbjct: 450 GMSERVSALGGTLDVAPCLPGGMRLAVTLP 479 >UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR7_DESMR Length = 482 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 13/225 (5%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 +L+ + AR+ L +++L +E R+ ++RELHD+ GQ++ ++ +Q L A + Sbjct: 261 ALRDKDARHVRLLQKVLSVQEDERKRISRELHDEAGQSLASL---LAYLQLLMAGEVTSS 317 Query: 342 QS---GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 Q GQL + L + + +R++ LRP LDDL L A+ + L+ R + + Sbjct: 318 QREAIGQL-KSLVVEILGGLRKMAVELRPPALDDLGLVPAMAKYVDGFALQ-RDLTAIFA 375 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 D L + L+R+ QE L N+ +HA+A AV ++ + + L + DDG G Sbjct: 376 PEDDNPELDPAVALALYRILQESLTNVARHAEAKAVRVELAAEGGDIALTVSDDGRGFDA 435 Query: 459 G---SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 +G++ G+ GM ER LGGT ++ GT V V+LP+R Sbjct: 436 AALPAGEESLGIYGMMERAELLGGTFQMTSRPGQGTTVRVALPRR 480 >UniRef50_A5FQU4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU4_DEHSB Length = 363 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 8/232 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-I 329 I LR++ +L++ R + L+ L++ E R+ +A+E+HD +GQ +T I Sbjct: 126 TDISHLRDIELALRESNKRLKELSNHLVQARELERKALAQEIHDQLGQALTGFNIDVSLI 185 Query: 330 VQRLAADNASVKQSGQ-LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++R + + +S L E++ L + D V+R+ LR + LDD+ L ++ L + + Sbjct: 186 IKRSKNLDPEIYKSAMCLSEKIQLTIQD-VKRIATELRSQILDDMGLVASLEWLSEDFQ- 243 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 GI E + V LFR+CQE L NI++H+ A+ V ++ + ++L+ Sbjct: 244 RRTGIKCWTEIHPKDLKTDPILSVNLFRICQEALTNIIRHSHATTVVIRLYMTPDQLIFQ 303 Query: 449 IEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 I+D+G G+ FG+ G++ERV LGG L I + GT + + LP Sbjct: 304 IKDNGIGINMKLIDKNDSFGILGIKERVCMLGGRLKIKGVLNVGTSIVILLP 355 >UniRef50_Q89V76 Two-component sensor histidine kinase n=2 Tax=Bradyrhizobium japonicum RepID=Q89V76_BRAJA Length = 446 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 123/243 (50%), Gaps = 33/243 (13%) Query: 269 LGAGIQRLR--------------ELNQSLQKE------LAR----NQHLAERLLETEESV 304 LGAG+ R+R E+ QS ++ LAR N+ L RL+ ++ Sbjct: 184 LGAGLTRIRRGDYATPIPVAGPPEIRQSCEEANALAATLARLSQDNRDLLHRLVSLQDDE 243 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADN--ASVKQSGQLIEQLSLGVYDAVRRLL 362 RRD+ARELHD++G + +IR AG + + A + + Q + Q + RR+L Sbjct: 244 RRDLARELHDELGPLLFSIR--AGTIALIEASPPVGHLGNTAQEVLQSVEALQQTNRRIL 301 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE--SALSENQRVTLFRVCQE 420 RLRP +++L LE ++++L+R + I L +D + L T++RV QE Sbjct: 302 DRLRPLYIEELGLETSVQTLLRNFRKQAPHI--GLTATVDPGLNGLDGPLAQTVYRVIQE 359 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 L N+++HA A +Q + L + I DDG G G+ G GLTGM ERV AL G+ Sbjct: 360 ALTNVLRHAAARNAHVQAAISGDALAIEISDDGGGFLEGN-VFGRGLTGMHERVRALSGS 418 Query: 481 LHI 483 L + Sbjct: 419 LSL 421 >UniRef50_Q251B4 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q251B4_DESHY Length = 372 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 20/230 (8%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 LRE S Q+E L + ++ +E R+ V+RELHD++GQ I ++ ++++ Sbjct: 143 LREF--SPQQEEYVQNLLTKYIIRAQEDERKRVSRELHDELGQNIYSVLVGLQVLEKAMP 200 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME----LEGR 391 + ++ Q++ + SL + ++ + LRP LDDL L AIRS ++ E +EG+ Sbjct: 201 EAVQIQNLQQMVAR-SLAM---LKNIAVELRPSTLDDLGLAAAIRSFLKHFEQTYGIEGQ 256 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 VS + R + L+R+CQE + N+ K+A + V + ++L L++ED Sbjct: 257 LTVSGEQHRYEPEI-----ETALYRICQEAMLNVAKYAKVTEVQVFLQNYPDQLNLIVED 311 Query: 452 DGSGLPPGSGQ---QGFGLTGMRERVTALGGTLHI-SCLH-GTRVSVSLP 496 G G G + G GL GM+ER +GG + I S ++ GTRV ++P Sbjct: 312 QGVGFDVGQLEIQGTGLGLYGMKERAQLVGGKVEIVSQVNLGTRVQATIP 361 >UniRef50_A3CQ91 Histidine kinase, putative n=3 Tax=Streptococcus RepID=A3CQ91_STRSV Length = 366 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 127/248 (51%), Gaps = 17/248 (6%) Query: 252 PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARE 311 P +LL +V L L G+ R++ + +++ +N L L E E R + R+ Sbjct: 127 PAELLF-FIVTFLFSDGLTFGLHRIQTTERIKEEKTKQNAQLNLFLAENE---RNRIGRD 182 Query: 312 LHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQL--IEQLSLGVYDAVRRLLGRLRPRQ 369 LHD +G T + +A + Q+ A K + +L ++++S VRR++ L+ R Sbjct: 183 LHDSLGHTFAMLSVKAELAQQFLQMEAYDKAAKELQEVQEISKKSMADVRRIINDLKNRT 242 Query: 370 LDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHA 429 LD+ + IR++ LE G+ ++ +++ +++ +Q+ T+ + E NI+KHA Sbjct: 243 LDEELV--TIRAM-----LEMSGVQVEIDNQLNVASIPPSQQSTISMILLEAATNIIKHA 295 Query: 430 DASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI-SCLHG 488 A ++DERL+L I+DDG G +G++ L +RER++AL G L I S Sbjct: 296 KAKKSNFSLVKKDERLILDIQDDGCGFQKLTGRE---LHSIRERLSALSGRLEILSSQDP 352 Query: 489 TRVSVSLP 496 T + + LP Sbjct: 353 TWIRIELP 360 >UniRef50_B2J8K5 Integral membrane sensor signal transduction histidine kinase n=6 Tax=Cyanobacteria RepID=B2J8K5_NOSP7 Length = 421 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 9/223 (4%) Query: 281 QSLQKELARNQHLAERLLETEESV----RRDVARELHDDIGQTITAIRTQAGIVQRLAAD 336 S +K N+ L E + E R +ARE+HD +G ++TA+ Q +L Sbjct: 196 HSREKLAIANEKLREYAMRIENQATLEERNRIAREIHDSLGHSLTALNLQLETALKLWQS 255 Query: 337 NASVKQSG-QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 N ++ ++L + VR+ + +R L + +LE+AI +L GI+ Sbjct: 256 NPGKAETFLATAKELGSKALNDVRQSVSTMRSNPLQEQSLERAIANLAENFH-RSNGILP 314 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 + + E +L ++R+ QE L NI K+A A+ V L+ L L+I+D+G G Sbjct: 315 ICQINL-EYSLPPEINTAIYRITQESLTNITKYAYATEVKLELATIRGNLRLIIQDNGRG 373 Query: 456 LPPGSGQQGFGLTGMRERVTALGGTLHISCLHGT--RVSVSLP 496 G GFGL MR+R ALGG +I+ G+ +++V++P Sbjct: 374 FDLGQNTTGFGLHSMRDRTLALGGDFNINSTPGSGCKITVNIP 416 >UniRef50_UPI0001692C7B sensor histidine kinase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C7B Length = 344 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 115/227 (50%), Gaps = 17/227 (7%) Query: 281 QSLQKELARNQHLAERLLETEE--SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 Q LQK L L+E+ + E RR +AR+LHD + Q + AI A + ++ N Sbjct: 118 QMLQK-LGEKSSLSEKETKQEAIMEERRRLARDLHDTVSQELFAIHMSASSLPKICEVNP 176 Query: 339 -SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR----SLMREMELEGRGI 393 + Q + Q+S +R L+ +LRP +L+ TLE+AI R EL+G Sbjct: 177 RGAEHVMQQLIQMSHHAQKQMRGLISQLRPIELNGSTLEEAIGRWFLEYCRANELQG--- 233 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 HLE ++E +SE LF + QEG+ NIVKHA AS V L + + + ++ ++D+G Sbjct: 234 --HLEVELNE-PMSEPIEQQLFLIIQEGMANIVKHAAASEVYLSIHELEHQYVMQLQDNG 290 Query: 454 SGLPPGS-GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G S GL MRER LGGT I GTRV V +P+ Sbjct: 291 HGFEQKSVTSASHGLATMRERSEKLGGTTEIISKQGAGTRVKVQIPK 337 >UniRef50_UPI0001693FB4 two-component sensor histidine kinase of nitrate reduction n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693FB4 Length = 386 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 120/230 (52%), Gaps = 10/230 (4%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 G++++ + + Q+++A+ + +L+ +E+ R+ ++RELHD IGQ + + G+++ Sbjct: 155 GVRKVGDERKEEQEKIAK--MITRSILQAQENERKRISRELHDGIGQQLYIMMIHLGMIK 212 Query: 332 RLAADNASVKQS-GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 A S+ G+L E L + D VR L LRP LDD+ L A+R+ +++ Sbjct: 213 AEAEGQDSIINPLGELEESTRLLIQD-VRHLSAELRPSTLDDIGLVAALRNYIQDYS-HK 270 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI H + + L+R+CQE L N K+A + + ++ ++ L ++ Sbjct: 271 FGIQVHFAYEGSKERFPAPVETALYRICQEALINAAKYAQTENIHILLDREPDQARLSVQ 330 Query: 451 DDGSG--LPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 D G G L PG+ +G GL M ER LGG++ I+ GT++ V +P Sbjct: 331 DFGVGFELKPGTA-RGVGLYSMEERAGILGGSVTITSQKTKGTKIEVRIP 379 >UniRef50_C7PEC3 Sensor protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEC3_CHIPD Length = 288 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 13/216 (6%) Query: 286 ELARNQHL-AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 +L R Q + A + + +E+ R+ +A ++HD+IG + AIR +Q L +Q Sbjct: 72 QLERQQAMMAIQEVSIQEAERKRIAADIHDEIGSNLAAIRVN---LQSLHYSTVQDEQKA 128 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLE---QAIRSLMREMELEGRGIVSHLEWRI 401 + QL VRR L P + L Q+ SL+R E ++ H Sbjct: 129 NSLLQLVDQTSQNVRRAAHNLVPPLFGHIPLTDILQSYFSLLRTPE-----VLFHFCSNK 183 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG 461 + Q + L+R+ E NI++H+ ASA T+Q E L +++EDDG GLP S Sbjct: 184 YQPCFDARQELMLYRIVMELTTNIIRHSRASAATIQLLYYPEYLEILVEDDGIGLPLNSR 243 Query: 462 QQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLP 496 G GL+G++ RV +LGG +HI S + GT + +P Sbjct: 244 PSGIGLSGVKTRVKSLGGQMHIDSGISGTTFIIHIP 279 >UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G173_DESHD Length = 482 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 11/232 (4%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 Q L + LQ + Q L ++++ +E R+ ++RELHD+ Q++T++ + L Sbjct: 249 QEREALVEELQAKETVRQELLKKVISAQEDERKRISRELHDEASQSLTSLILGLKYLSEL 308 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 S + +L ++L+ V R+ LRP LDD+ L AI ++ + + R Sbjct: 309 EEHEKSPAMASEL-KELASSTLKEVHRIAVELRPTVLDDMGLVPAIERFVKFFKRQYRLD 367 Query: 394 VS-HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 V H + RI S L +TL+R+ QE L N+ K+A+A ++ + + + L+IEDD Sbjct: 368 VDFHAQNRI-ASRLPNEIEITLYRIVQEALTNVAKYAEARNASIVLEIKPDYVNLIIEDD 426 Query: 453 GSG------LPPGSGQQGFGLTGMRERVTALGG--TLHISCLHGTRVSVSLP 496 G G L + G+ GM+ER + LGG T+ S GT V V +P Sbjct: 427 GKGFDVDQVLKSSASDSHLGIAGMQERTSLLGGEFTIESSPDQGTAVYVRIP 478 >UniRef50_B5WKH2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia sp. H160 RepID=B5WKH2_9BURK Length = 383 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 12/205 (5%) Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAV-- 358 ++ R+ +A +LHD +GQ +T I+ R+ + + Q ++ L V +A+ Sbjct: 177 QQRERQRLAADLHDGLGQALTLIKLMIED-SRIRLRRGQAEDAAQKLDATVLQVREAIGE 235 Query: 359 -RRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 R++ G LRP LD L L A+ +L R +E G +D+ + + + +FR+ Sbjct: 236 MRQICGELRPLALDRLGLAVALSTLCRRVERGADGTAVSFRCDVDDRDVPDYLKADIFRL 295 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL------PPGSGQQGFGLTGMR 471 QE LNNIVKHA A+ + L + D L+L ++D+G+G P G G GL GM+ Sbjct: 296 AQEALNNIVKHASATEIRLTLQRIDTGLLLTVQDNGTGYDTRPLSPEDMGSTGLGLAGMQ 355 Query: 472 ERVTALGG--TLHISCLHGTRVSVS 494 RV + GG ++H S GT VS S Sbjct: 356 HRVESQGGFLSVHSSDAIGTLVSAS 380 >UniRef50_A1HU07 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU07_9FIRM Length = 478 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 117/222 (52%), Gaps = 20/222 (9%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 +++ QKE AR HL ++++ +E R+ +ARELHD+ GQT+ ++ G+ + A Sbjct: 240 MDELKQKEEART-HLLQKVIVAQEEERKRIARELHDETGQTLASL--MMGL--KCLAATC 294 Query: 339 SVKQSGQLIEQLSLGVY---DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 + G +E++ L V DAV R+ LRP LDD+ L A+ + + GI + Sbjct: 295 PESERGCRLEEMRLAVKKTIDAVHRMAIELRPSILDDMGLIPAVEKYVNDFR-HNYGIDT 353 Query: 396 --HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 H++W+ ++ + E + VT++R+ QE L NI K+A A V + L +++EDDG Sbjct: 354 DLHIQWQCEKRLVHEIE-VTVYRIVQEALTNIAKYAKADNVCIIMTCDRRGLEVIVEDDG 412 Query: 454 SGLPPG-------SGQQGFGLTGMRERVTALGGTLHISCLHG 488 G +G Q GL GM+ER T +GG L I G Sbjct: 413 VGFDADAILQQSVAGTQ-LGLFGMQERATLVGGALTIESTPG 453 >UniRef50_D1BCA7 Signal transduction histidine kinase n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCA7_SANKS Length = 451 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 111/223 (49%), Gaps = 18/223 (8%) Query: 268 LLGAGIQR--LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAI-- 323 +L G+QR L E Q+ + EL R QH A E E VARE+HD + Q T+I Sbjct: 196 ILRQGVQRAALLESLQATRAELGRTQHAAGVAAERER-----VAREIHDTLAQGFTSIVM 250 Query: 324 --RTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 +T + QR D+ V + +LIE+ + R L+ P L +L +AI Sbjct: 251 LAQTASAEAQR--GDDEQVARRLELIERTARENLAEARSLVSASSPAPLAGSSLPEAIER 308 Query: 382 L-MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 L R E G +V+ + L V L R QE L+N+ +H+ AS V++ Sbjct: 309 LGARLTEETGIEVVTRC---TGPAELPSPVEVVLLRTVQESLSNVRRHSGASRVSVTLET 365 Query: 441 QDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI 483 ++ + DDG+GL P S +GFGL GMRERVTA GG++ + Sbjct: 366 TSSEAVVTVTDDGTGLHP-SSVEGFGLRGMRERVTASGGSVRV 407 >UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF1_JANMA Length = 626 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 119/236 (50%), Gaps = 10/236 (4%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L + I + E L++ + LA+R + E R+ +ARELHDD+ Q ++A+R Sbjct: 392 LAISRNITSIIEAENQLRQSQKLLRQLADRSETSIEDERKHIARELHDDLAQHLSALRMN 451 Query: 327 AGIVQRLAADNASVKQSGQ---LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 ++ +L + S SGQ +IE+L + A R ++ LRP LD + + QA+ L+ Sbjct: 452 VSVM-KLEFGHLSSAFSGQAETMIERLDATIKIA-RNVITALRPTALD-MGIVQALEWLV 508 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 ++ + I L + LS+ +FR+ QE L NI +HA+A V + +D Sbjct: 509 KDFSTH-KEISCRLHIHDENLILSDRSATAIFRIAQESLRNISRHAEACNVDVNLSHKDG 567 Query: 444 RLMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 +L I DDG G + FGL G++ERV LGG + I GT + V++P Sbjct: 568 MCLLAIRDDGRGFNTTNVPFNSFGLMGIKERVLILGGKVEIESEEGQGTTIRVNIP 623 >UniRef50_B8EMN3 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methylocella silvestris BL2 RepID=B8EMN3_METSB Length = 496 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 114/244 (46%), Gaps = 27/244 (11%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV--- 330 + +L+ +L + A N L +RLL +++ R+++ARELHD+ G ++ IR A V Sbjct: 225 EHFNKLSATLARAEADNHLLIDRLLSIQDAERKELARELHDEFGASLFGIRVAASCVVEA 284 Query: 331 ----QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A+ + + I L+ + R+L R+RP L + L A+R L+ Sbjct: 285 AAAGAGTPAEKDEIIDRAKNISALADAIQKQNYRILERIRPVVLRQMGLADALRQLVETF 344 Query: 387 ELEGRGIV-------SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 + R + E R DE A +T +R+ QE L N+ +H+ ASAV++ Sbjct: 345 AAQHRDFSCAIDITGAEAERRFDEEA-----SLTAYRIVQECLTNVARHSGASAVSIAMA 399 Query: 440 QQ-----DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVS 492 + + LVI DDG G PP + GFGL GM ER L G L I G R+ Sbjct: 400 VETLDVAGPHIRLVIADDGIGPPP-ELRYGFGLLGMSERARKLDGRLSIKKGASGGMRIE 458 Query: 493 VSLP 496 +P Sbjct: 459 AVIP 462 >UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID=C2C0V0_LISGR Length = 358 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 16/236 (6%) Query: 274 QRLRELNQSLQKELARNQHLAERLLET----EESV----RRDVARELHDDIGQTITAIRT 325 Q++ L + +Q + AR Q +A ET +E++ R +ARELHD + Q + A Sbjct: 110 QQINRLRKKMQLQNARTQEIASGYAETAGQSKEAILVEERHRIARELHDSVSQQLFAAMM 169 Query: 326 QAGIVQRLAADNAS--VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 + NA+ +++ +L+E + +R LL LRP QL+ +L+ + L+ Sbjct: 170 LLSALNEQGEKNATPAMQKQLKLVESIVNDSQSEMRALLLHLRPTQLEGKSLKVGMEQLL 229 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 +E+ + I + W I + AL + LFR+ QE L+N ++H+ A+ + ++ D+ Sbjct: 230 QELTAK---IPIEVRWEIADIALKKGIEDHLFRIVQELLSNTLRHSKAALLEVRLAIVDQ 286 Query: 444 RLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 +L + DDG G G QG +GL MRERV GGT+ I GT V V +P Sbjct: 287 VAILKVVDDGVGFNVGEVAQGSYGLQNMRERVEEFGGTIKIISFPNQGTSVEVKIP 342 >UniRef50_D1UD43 Histidine kinase n=2 Tax=Burkholderia RepID=D1UD43_9BURK Length = 340 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 23/229 (10%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA-A 335 R L Q ++ LA N+ LA L+ EE RR +ARELHD++GQ + AI A ++ L+ A Sbjct: 92 RVLEQEAERLLADNRRLATEALQAEELERRHLARELHDELGQYLNAISLDAARIRDLSDA 151 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM---REMELEGRG 392 + + + Q + VY + ++ RLRP LD+ L A+ + RE E Sbjct: 152 REPEIHRISLAVMQSASHVYRQIGGMIRRLRPIGLDEFGLPSALEHCVDGWRERLPEA-- 209 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL---------QGWQQD- 442 L D + LS+ +TL+R+ QEGL N+ K A S V + Q ++ Sbjct: 210 -SFSLTIEGDYTGLSDTLTMTLYRLVQEGLTNVSKFARRSRVEVFMVRAPREAQSPTKNV 268 Query: 443 ------ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC 485 + +++ + DDG G+ + + G GL GMRERV ALGG H++ Sbjct: 269 GKTGPIDEIVVTMADDGPGVDLDAPRAGLGLIGMRERVEALGGEFHVAS 317 >UniRef50_UPI000196C4DE hypothetical protein CATMIT_02034 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C4DE Length = 434 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 10/221 (4%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI---VQRLAADN 337 + EL ++E++ E +E R+ +ARE+HD +G +T I AG+ + + + Sbjct: 215 HQVNHELENYAAVSEKIAEDKE--RKRLAREIHDTLGHALTGI--AAGVDACIAMIDINP 270 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 + KQ +I ++ VR L +LRP L+ + A+ + + E ++ L Sbjct: 271 QATKQKLMVISKVVRQGIGDVRNSLNKLRPGALEQHGFKGALENRIEEFTSVSDLEIT-L 329 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 ++R+++ + LFRV QE + N V+H DA+ + + + +D++L L I+D+G G Sbjct: 330 DYRLEKVDFENTKEDILFRVIQESITNAVRHGDATHINISIYIEDQKLKLEIQDNGQGCE 389 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 GFGL MRER++ + G + HG V++P + Sbjct: 390 --EIHYGFGLKQMRERLSMINGRVTYDGHHGFLTVVTIPMQ 428 >UniRef50_Q0G064 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G064_9RHIZ Length = 457 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 12/229 (5%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT-AIRTQAGIVQRLAADN 337 L Q L+ L + L +RL +E R ++AR+LHD+ GQ +T A+ + I D Sbjct: 222 LAQRLELSLEDRRVLMKRLFAVQEEERLNLARDLHDEFGQCLTAAVALTSSIEGNAGPDR 281 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE--MELEGRGIVS 395 + + + ++ + + ++ RLRP L++ L ++ +L+ E L GR VS Sbjct: 282 PDIARDAATLSRIERRMMETLKGAFSRLRPPDLEEFGLRTSLDALVHEWNASLSGRTRVS 341 Query: 396 -HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS-AVTLQGWQQD---ERLMLVIE 450 +DE+ V ++R+ QE L N+ +HADAS A + + +D + + + Sbjct: 342 LQAPDGLDET--PHEVAVAIYRIVQECLTNVARHADASEARVVVAFPEDGLQPSIAVSVS 399 Query: 451 DDGSGLPP-GSGQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLPQ 497 DDG G G +G GL GMRERVTA GG L I GTR+ LP+ Sbjct: 400 DDGVGCQTMGEEGRGSGLIGMRERVTAFGGRLSIVDTGRGTRIEARLPR 448 >UniRef50_B7CDS9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDS9_9FIRM Length = 436 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/390 (23%), Positives = 177/390 (45%), Gaps = 60/390 (15%) Query: 141 LLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLV-SQPINWRGRHLVWYLLLFVISLWL 199 + + L +++ P F+H+ ++ LG SL+ + I++ +LF++ Sbjct: 69 MFIALFCFVSIRPKLKFFYHHQMIPIFIELGFSLILMKNISFSAT-----CILFIVIADC 123 Query: 200 QLGLPDELSRFTPFCLALPIIALAW-HYGWQGALIATLMNAIALIASQTWRDHPVDLLLS 258 + + R C+ L +A + +YG+ L N I +I+ Q + LS Sbjct: 124 LMYVDKPFDR--SICIILVFLAYMFSNYGY-------LSNYIPMISFQEY--------LS 166 Query: 259 LLVQSLTGLLLGAGI-------------------------QRLRELNQSLQK---ELARN 290 + GLL+G + Q+ LN L++ +L Sbjct: 167 VYNSRTQGLLMGIEVTLTNLNIVLFIAYIFLYLQKQMNETQKFASLNAELKRLNIQLKGY 226 Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQS--GQLIE 348 +L E++ ET+E R +ARE+HD +G T+T + Q + + +V ++ G L E Sbjct: 227 ANLREKMGETKE--RNRLAREIHDTLGHTLTGLSVGLEACQVMIDRDVNVTKAQLGILQE 284 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSE 408 G+ D VRR + +L+P L+ +L++A+ ++ + + + +L + L+ Sbjct: 285 SAKRGLTD-VRRSVDKLKPDALERYSLKEALDMMIMDFQKLTDVTILYL-CHLPLVNLNA 342 Query: 409 NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLT 468 ++ ++RV QEG+ N V+H A+ + + Q D L+++IED+G G + GFG+ Sbjct: 343 DEEEIVYRVVQEGMTNSVRHGHATKIYVSIAQADNNLIIIIEDNGQGCKDVN--PGFGIH 400 Query: 469 GMRERVTALGGTLHISCLHGTRVSVSLPQR 498 + ER+ L G + +G + V +P R Sbjct: 401 HLTERINLLQGRIRYYGDNGFELIVEIPMR 430 >UniRef50_B9TCE7 Sensory transduction histidine kinase, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TCE7_RICCO Length = 358 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 116/226 (51%), Gaps = 10/226 (4%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD 336 RE L++ + LA R E R+ +ARELHD++GQ +TA+R +A + R+ + Sbjct: 122 REAEHRLRESYEMLRELASRRETDREDERKHIARELHDELGQHLTALRMRASTL-RMQLE 180 Query: 337 N---ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 N A V ++ LI L VR ++ LRP LD + + A+ L E GR + Sbjct: 181 NHHPALVDETRSLI-ALVDQTMQVVRSVITSLRPPVLD-MGIAAALEWLAAEFNRNGRTL 238 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 HL R + +SE+ + LFRV QE L N+ +HADA+ V + ++ +L + DDG Sbjct: 239 C-HLLMRDENIEMSEDHAIVLFRVVQEALTNVTRHADATEVIITLDRRPNACLLEVLDDG 297 Query: 454 SGLP-PGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 G + + FGL GM ERV GG + I S GT V V LP Sbjct: 298 QGFDVQATRSKSFGLAGMEERVLMHGGKIAIISSPRIGTLVKVDLP 343 >UniRef50_A9BNQ5 Histidine kinase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BNQ5_DELAS Length = 470 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITA----IRTQAGIVQRLAADNASVKQS--G 344 Q LA+R++ ++E R VAR+LHD + Q + + + T ++RLAA + + Q Sbjct: 236 QRLAQRVVHSQEEERTRVARDLHDGVVQVLVSSKFLLETAQAQLRRLAAQDPATAQRMVD 295 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 Q +EQL+ + + +RR+ LRP LDDL L A+ + ++M+ E G+ R + Sbjct: 296 QGLEQLNHALVE-IRRVSHGLRPALLDDLGLAPALALMSQQMQAED-GLRMQFGCRGETR 353 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP----PGS 460 L + LFRV QE + N HA A+ + + Q R++L + DDG G Sbjct: 354 FLPPSHATALFRVAQEAVTNAQNHAQATRIDVSLHFQRRRVVLQVSDDGQGFDMRRVQRD 413 Query: 461 GQQGFGLTGMRERVTALGGTLHISC-LHGTRV 491 Q G GL MRER+ LGG L IS GTR+ Sbjct: 414 RQGGIGLRNMRERIEGLGGHLSISSGRRGTRL 445 >UniRef50_A6FC55 Hypothetical nitrate/nitrite sensor protein NarQ n=1 Tax=Moritella sp. PE36 RepID=A6FC55_9GAMM Length = 572 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 140/274 (51%), Gaps = 19/274 (6%) Query: 230 GALIATL-MNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA 288 G+ + T+ +NA A QT +DL L L QS L + +E +S + ++ Sbjct: 295 GSEVETIYLNAGADNGEQT-----IDLKLELEEQSFGTLTVLKREANDQEHLRSYCRIIS 349 Query: 289 RNQHLAERLLETEESV----RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 R QH ++ LE + S+ R +ARELHD + Q ++ ++ Q +++R + + Sbjct: 350 RAQHRSQSNLEAQRSLLMEERAVIARELHDSLAQALSYLKIQVALLKRHLKNQEVTPTTN 409 Query: 345 QLIEQLSLGV---YDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 +++E++ + + Y +R LL R LDD L +AI ++ ++ + + HL + + Sbjct: 410 EIVEEIDVNLRVSYTQLRELLNTFRLT-LDDANLSEAISIMLAQLRQRTKSKI-HLSYEL 467 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ-GWQQDERLMLVIEDDGSGLPPG- 459 +E NQ + + ++ +E + N +KHA+++ + + G ++ + + I DDG G+P Sbjct: 468 EEHLFKPNQHIHILQIIREAVLNSIKHANSNEIMIDCGTNKNGTIEVSISDDGDGIPADP 527 Query: 460 SGQQGFGLTGMRERVTALGGTLHI--SCLHGTRV 491 + +GLT M ER + LG L I + + GT V Sbjct: 528 TKSNHYGLTIMDERASKLGAKLEIKNNIIKGTSV 561 >UniRef50_Q1IR07 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Acidobacteria RepID=Q1IR07_ACIBL Length = 443 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 1/189 (0%) Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSL 352 LA +L+ T+ES + V+RELHD+ GQ +TAI + G ++ A ++ + + +++ Sbjct: 233 LAHKLIATQESTLQFVSRELHDEFGQILTAIGSLLGRAEKQAPAGSTWARDLHEVREMAQ 292 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 D+VR L L P LD+ +E AI + ME + I H + + Sbjct: 293 STLDSVRSLSQALHPVVLDEAGVEHAIDWYLPMMERQN-AITIHYGKSGSSQLVGSGAGI 351 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRE 472 ++R+ QE LNN+V+HA ++ + RL+L +ED G G P ++G G+ MRE Sbjct: 352 HIYRILQEALNNVVRHASVQEAWVRLQFEPGRLLLEVEDHGKGFQPDPSRRGIGVVAMRE 411 Query: 473 RVTALGGTL 481 R LGG + Sbjct: 412 RAELLGGNI 420 >UniRef50_B5JFN8 Histidine kinase domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN8_9BACT Length = 403 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 11/224 (4%) Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AAD 336 +L+++ +K A + + E L T+E R +ARE+HD IG ++T + Q + L +D Sbjct: 187 DLDEANEKLRAFSGQI-EELAATQE--RNRIAREIHDTIGHSLTVVNMQLETSKALIDSD 243 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 K+ + ++++ VR + LR LD +L A+ +M G G+ + Sbjct: 244 KEKAKRFLEKAQEVTRQGLTDVRSSVASLRSSPLDGKSLPGALEGMMSASF--GGGVKTR 301 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ-GWQQDERLMLVIEDDGSG 455 E + + +AL+ L+R QE L N+ KHADAS V L + E + LV+ D+G G Sbjct: 302 FELKGEVAALNPASEAALYRSAQEALTNVRKHADASEVKLSLDFSFPECVKLVVADNGKG 361 Query: 456 LPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 G GFG+ G+RER+ L G + +S G +S+SLP+ Sbjct: 362 SEKVEG--GFGIMGIRERIQLLDGEMRVSTSPGQGLELSLSLPR 403 >UniRef50_A1WJX0 Response regulator receiver sensor signal transduction histidine kinase n=10 Tax=Comamonadaceae RepID=A1WJX0_VEREI Length = 385 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 7/212 (3%) Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIE 348 R LAE L + E R +ARE+HDDIG +TA+R + R +D A ++ + E Sbjct: 164 RLAELAEHLQTSIEQERAAIAREIHDDIGGALTAVRVAVAWIGRHGSDPALLEHARSAAE 223 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSE 408 L + A +R++ LRP L+ L AI+ L E G+ + + + S Sbjct: 224 MLQHAI-GASQRIMMNLRPPILEQ-GLVAAIQWLAAGFERR-TGVATRVRSSGEAIQTSP 280 Query: 409 NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG--SGQQGFG 466 + R+ +R QE L N+ KHA A V ++ + L L + DDG G+ PG Q FG Sbjct: 281 DIRLVAYRTAQEALTNVSKHAQAGRVEIELSDKKGMLTLEVADDGLGIAPGMLDKPQAFG 340 Query: 467 LTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 L G++ER +GG L IS HG+ V++S+P Sbjct: 341 LKGLQERARTVGGWLDISSRPGHGSCVTLSIP 372 >UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TAX2_BURPP Length = 748 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 6/199 (3%) Query: 302 ESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRR 360 E R+ +ARE+HD++GQ +TA+R ++ A D+ ++ + + L+ VR Sbjct: 547 EEERKRIAREMHDELGQQLTALRLGVSAMRIEFAQDDPALAGRFRDLLALADDTMQVVRN 606 Query: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 ++ LRP +D + A+ L E +GR + HL D L E + + LFR+ QE Sbjct: 607 VVASLRPAAID-AGIVAALEWLAAEFSRDGR-VACHLRIPDDNLVLDEARAIALFRIVQE 664 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGG 479 L N+ +HA A+ VT+ Q +L I DDG G + + + FGL GMRERV LGG Sbjct: 665 ALTNVARHAAATQVTISLEQTGRCWVLEISDDGCGFDSMAARMKSFGLVGMRERVLMLGG 724 Query: 480 TLHISCL--HGTRVSVSLP 496 + + GT ++V +P Sbjct: 725 EISVCSAPGSGTSITVCIP 743 >UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FA0 Length = 423 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 103/223 (46%), Gaps = 11/223 (4%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESV-----RRDVARELHDDIGQTITAIRTQAG 328 ++L + N L+ L N L +LL R+ +ARE+HD + Q +T I TQ Sbjct: 188 EKLAQTNARLETALTENAALHAQLLTQARQAGVLDERQRMAREIHDTVAQGLTGIVTQLQ 247 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM-REME 387 R A + A ++ + L+ RR + LRP L D L +A+ L R + Sbjct: 248 AADR-ATEAADRQRHLAHVHTLAKDSLTEARRAVQALRPEPLADSHLPEALAGLANRVSD 306 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 G + + +E D L VTL+RV QE L N KHA A+ + + + +ML Sbjct: 307 TSGTKVTADVEG--DARPLLPELEVTLYRVAQEALANAEKHARANRIGITLTYTSDLIML 364 Query: 448 VIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLHG 488 I DDG G PG GFGL MR+RV + G+L I G Sbjct: 365 DIRDDGRGFAPGDRGDGTGFGLEAMRQRVQRVAGSLTIESARG 407 >UniRef50_Q0B944 Multi-sensor signal transduction histidine kinase n=29 Tax=Burkholderiaceae RepID=Q0B944_BURCM Length = 707 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 116/236 (49%), Gaps = 30/236 (12%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR- 332 + LREL+ +LQ + EE R +ARELHDD+GQ +TA++ ++++ Sbjct: 478 EELRELSANLQN------------VREEEKTR--IARELHDDLGQQLTALKMDLSVIEQQ 523 Query: 333 -----LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 A N V Q + +L +VRR+ LRP LDDL L AI L + Sbjct: 524 LRAPGRAQPNDDVLSHLQGMRRLIDATVASVRRIAADLRPVMLDDLGLVPAIEWLANDF- 582 Query: 388 LEGRGIVSHLEWRIDESAL--SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 GI +E I+ L + TLFR+ QE L N+ +HADA+ V L+ ++ Sbjct: 583 TNRYGI--DVERHIETGGLTFTSAGATTLFRIVQEALTNVARHADATRVALRLDIEEGFC 640 Query: 446 MLVIEDDGSGLPPGSG---QQGFGLTGMRERVTALGG--TLHISCLHGTRVSVSLP 496 +L + D+G G PG + FGL G+RER LGG T+ + G ++V+ P Sbjct: 641 VLRVADNGRGAAPGGSAHEDKSFGLIGIRERAHMLGGNVTIDTALARGFSITVAFP 696 >UniRef50_B4WTJ3 Histidine kinase domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTJ3_9SYNE Length = 413 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS- 339 +S Q+E A Q + E L E R +AR++HD +G T+T++ Q + QRL N++ Sbjct: 193 KSRQREAALAQEV-ELLAADLERAR--IARDIHDSLGHTLTSLDIQLELAQRLYERNSTG 249 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 +Q+ + + LS VRR + LR D L AI +L+ ++ + +V E Sbjct: 250 ARQAIDISKLLSGQSLQEVRRAVTTLREEAFD---LNAAIANLVEPLKSDSNLVV---EN 303 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG 459 ++ L L+ + +EGL NI +HA A + L W E +++ IEDDG G G Sbjct: 304 KLTLPKLPLQTSHQLYCIIKEGLENIRRHAQARVIGLYSWATPENIVVYIEDDGVGFDVG 363 Query: 460 -----SGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 SG + FGL GM+ER ++GG + I + GTR+ +++P Sbjct: 364 LSATESGSR-FGLRGMQERSQSIGGCMKIDSASKQGTRIQITVP 406 >UniRef50_Q39TN6 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN6_GEOMG Length = 439 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 10/229 (4%) Query: 277 RELNQSLQKE-----LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 RE+ +S ++E L + + L+ L+ E R VARE+H+++GQ + A++ +V Sbjct: 196 REIERSKREEGLVDSLKKQRRLSFHLMSAREEERTAVAREIHEELGQMLAALQLNVSLVT 255 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 + D+A + Q +EQL V R+ LRP LD L L AI +E E + Sbjct: 256 KEYLDHAKLVARTQAMEQLITSSIMTVNRISSELRPVMLDILGLADAIEWQAKEFEKKS- 314 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 GI + E + + ++R+ QE L+N+ +HA A V + ++ R+ L + D Sbjct: 315 GIRCKTTILLAEKKVDRDVSTAVYRIVQEALSNVARHATADHVRVTLVEKVGRVTLSVSD 374 Query: 452 DGSGLP--PGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 +G G+ + Q G+ GMRER A GG L I S GT V +P Sbjct: 375 NGRGITEREKNNPQSLGIAGMRERAEAFGGRLRICGSSRQGTTVVARIP 423 >UniRef50_Q0BQU7 Two component system histidine kinase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BQU7_GRABC Length = 545 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 119/247 (48%), Gaps = 43/247 (17%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 R L LQ+ N HL +RL+ +E+ RRDVA ELHD+ G AIR + + R Sbjct: 231 RFDSLAARLQRITQDNHHLIDRLISMQEAERRDVAHELHDEFGPAFFAIRAELASLTRWC 290 Query: 335 ADNAS-VKQSGQLIEQ--------LSLG-VYDAVRR----LLGRLRPRQLDDLTLEQAIR 380 D +Q+G I + LS+G + DA++ +L RL P L+++ L A+ Sbjct: 291 RDQQQREEQAGLPIREVEKIESRVLSIGSLVDAIQNINAAMLERLCPMVLEEMGLPDALE 350 Query: 381 SLMREMELEGRGIVSHLEWRID-ESALSENQR---VTLFRVCQEGLNNIVKHADASAVTL 436 L+ + R V +W I + L + Q +TLFR+ QE L NI +HADA V + Sbjct: 351 RLVEDW----RRRVPQTQWDIMLCTGLEQTQTDLALTLFRLVQECLTNIARHADARHVEV 406 Query: 437 ---------------QGWQQDER-----LMLVIEDDGSGLPPGSGQQGFGLTGMRERVTA 476 G QD + L + + DDG+G G+ G+GL GM ERV A Sbjct: 407 GFFWLPPRLPPREKPAGAAQDCKTEPAWLGVYVRDDGTGF-SGAPSYGYGLLGMTERVRA 465 Query: 477 LGGTLHI 483 GG L+I Sbjct: 466 AGGKLYI 472 >UniRef50_B3E9K4 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K4_GEOLS Length = 395 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 116/222 (52%), Gaps = 10/222 (4%) Query: 283 LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS--V 340 LQ+ R L+ L + E RR +AR++HDD+GQT+TA+ + I L ADN Sbjct: 172 LQESNRRLSLLSAHLEKVREDERRSIARDIHDDLGQTLTAMHLE--ITAMLHADNVIDLT 229 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 + L +Q+ + V+R++ +RP+ L++L LE A+ SL +E+ + I Sbjct: 230 PRLCDLKKQVDAAI-GTVQRIISTMRPQVLEELGLEAALESLAQEVR-KRTNITCVTSCT 287 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG- 459 + +S+ L+RV QE L N+ +H+ A+ V L ++D L L I D+G G+ Sbjct: 288 LAGEPISQEVASCLYRVAQESLTNVFRHSKATKVLLTVRRRDGWLQLQIRDNGVGVSEAQ 347 Query: 460 -SGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQR 498 + FG+ GMRERV GG+ IS GT V +P++ Sbjct: 348 TAASNAFGVMGMRERVARCGGSFSISPRVGGGTIVEAQVPEK 389 >UniRef50_A6GNY2 Histidine Kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GNY2_9BURK Length = 424 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 15/253 (5%) Query: 255 LLLSLLVQSLTGLLLGAGIQRL-RELNQSLQKEL-ARN---QHLAERLLETEESVRRDVA 309 L+L L V + L A IQ L + N L+ ++ AR +LA L +E+ R+ +A Sbjct: 175 LILGLFVVQQRQVALRARIQELLKTENSRLEAKVQARTLELSNLATNLTTAQEAERQHIA 234 Query: 310 RELHDDIGQTITAIRTQAGIVQR---LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 RELHD++G +TA + AG ++R D ++ +LIE + RRL+ L+ Sbjct: 235 RELHDEMGSALTAAKMDAGWLRRSLGTQVDELVQERMLRLIENIG-STISMTRRLVDDLQ 293 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P L L L +A+RSL ++ E++ ++ E E +LS Q + LFRV QE L N+ Sbjct: 294 PPLLKGLGLVEALRSLGQQFEMDMSVVMDFPEH---ELSLSPEQSLALFRVAQESLTNVR 350 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISC 485 K+A AS V L ++ ++L + D+GSG + + G G+ GM+ R L + Sbjct: 351 KYAKASKVELSLKEKQGMVILSVADNGSGFNTENIELHGHGIAGMKHRAQMFNANLLLDS 410 Query: 486 L--HGTRVSVSLP 496 GTR+ V +P Sbjct: 411 QAGRGTRIEVRMP 423 >UniRef50_B0UCY8 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Methylobacterium RepID=B0UCY8_METS4 Length = 700 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADNAS 339 + ++ A + L RL + +E +R +ARELHD +GQT+T + G+ LA + Sbjct: 461 EPRKRAEAAHHDLLRRLAQAQEDEQRRIARELHDQVGQTVTGLSLGLKGLEDLLARGPSP 520 Query: 340 VKQSGQL--IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE--------MELE 389 + Q+ ++ L+ + + R LRP LDDL L A+ +L + ++++ Sbjct: 521 PRARDQVRWLQGLAGEIGRDIHRTASDLRPSALDDLGLVNALAALGADWTARYGLGVDVQ 580 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 G+ + L ++ ++RV QE L N++KHA A+ V++ ++ ERL +VI Sbjct: 581 AFGLSARLPLEVE---------TAMYRVAQEALTNVLKHARATHVSVVLERRGERLGVVI 631 Query: 450 EDDGSGL------PPGSGQ-QGFGLTGMRERVTALGGTLHISCLHGT 489 EDDG+G PP G+ + GL+ +RER++ +GGTL + G+ Sbjct: 632 EDDGTGFDPEACAPPAEGRPRRLGLSSIRERLSLIGGTLRVESAPGS 678 >UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Burkholderia RepID=A3NKQ6_BURP6 Length = 492 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 9/196 (4%) Query: 298 LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSL--GVY 355 + EE R +ARELHDD+GQ +TA++ +V D ++ +L +L + Sbjct: 281 IREEEKTR--IARELHDDLGQQLTALKMAVTLVDNELKDAGWASRTSRLPNVYALIGQLL 338 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR-GIVSHLEWRIDESALSENQRVTL 414 D+VRR+ LRP LDDL L AI L E R + S +E D+ A + + Sbjct: 339 DSVRRIAADLRPVMLDDLGLMAAIEWLTHEFVERYRIPVTSRIE--ADDIAFTRGSATEV 396 Query: 415 FRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS--GQQGFGLTGMRE 472 FR+ QE L N+ +H++A+ VTL + + ++ I D+G G + + GL GMRE Sbjct: 397 FRIVQEALTNVARHSEATEVTLDIIRDEPNCIVRIADNGCGTARDTRPNRHSLGLLGMRE 456 Query: 473 RVTALGGTLHISCLHG 488 R LGG + I G Sbjct: 457 RAARLGGEIRIDTAPG 472 >UniRef50_A8H4Y1 Histidine kinase n=2 Tax=Shewanella RepID=A8H4Y1_SHEPA Length = 1093 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 26/220 (11%) Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-----NASVKQSGQLI 347 LA ++ +E R+ ++RELHD GQT+TA + + ++ ++++ + +I Sbjct: 884 LATQIQNAKEEERKSISRELHDQFGQTLTATKINLQLYKKFNYQEQERIDSAISITHTMI 943 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 +Q+ R + LRP LDD L ++ + +M I + +E+ + Sbjct: 944 QQM--------RAISFNLRPALLDDEGLVAGVKLQLEKMSAL---IANPIEFSVSSDFPI 992 Query: 408 ENQRVTL--FRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG- 464 NQ +T+ FR+ QE +NN ++HADA + + E+L++ I+DDG G +Q Sbjct: 993 VNQGITINVFRIIQESVNNAIRHADAKQICVSLIYHSEQLLIEIKDDGKGFDVEKAKQNT 1052 Query: 465 -----FGLTGMRERVTALGGT--LHISCLHGTRVSVSLPQ 497 GL GM ERV +L G LH S +G+ + V +P Sbjct: 1053 FSGIHLGLLGMEERVHSLSGKLMLHSSVTNGSIIKVVIPN 1092 >UniRef50_C9RWH5 Integral membrane sensor signal transduction histidine kinase n=13 Tax=Bacillaceae RepID=C9RWH5_GEOSY Length = 344 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 119/226 (52%), Gaps = 12/226 (5%) Query: 278 ELNQSLQKELARNQHLAERLLE---TEESVRRDVARELHDDIGQTI-TAIRTQAGIVQRL 333 E + +QK A ERL+E +EE R +ARELHD + Q + A + +++ + Sbjct: 115 EQTKRVQKLAAEKAEQEERLVERILSEERTR--LARELHDSVSQQLFAASMMMSAVMETM 172 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 D+ ++ +++EQ+ +R LL LRP L +L++ + L+ EL G+ + Sbjct: 173 PPDDERHRKQLKMVEQMIHQSQLEMRALLLHLRPVHLKGKSLQEGMNELL--TELAGK-V 229 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 ++W+I++ +L + LFR+ QE L+N ++HA A ++ + ++D +L + DDG Sbjct: 230 PLEMKWKIEDISLDKGVEDHLFRILQESLSNTLRHAKAKSLEVLLIERDGFAILRVTDDG 289 Query: 454 SGLPPGSGQQG-FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G + G +GL M ER +GG L I L GTR+ V +P Sbjct: 290 VGFDVERSKSGSYGLQHMYERAAEIGGMLKIVSLKGQGTRLEVKVP 335 >UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY8_SYMTH Length = 346 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 21/242 (8%) Query: 273 IQRLRELNQSLQKELARN-QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 I R+ E+ + LA + Q +A ++L +E R+ +ARELHD+ Q++T+I ++ Sbjct: 104 IARVSEMANLMLDRLAEHRQAVAAQILRAQEEERKRIARELHDETAQSLTSIVVNLEAIE 163 Query: 332 RLAAD---NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE--- 385 R A + ++ + L ++++ D RRL+ LRP LDDL L A+R + Sbjct: 164 RQAVGSGVDEALCERLHLTKEVAQRTLDETRRLMMDLRPSVLDDLGLVPALRWFINHRVL 223 Query: 386 -MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 LE VS L R L E LFR+ QE + N+VKHA A V ++ ++ Sbjct: 224 PAGLEADFQVSGLTER-----LPEELETALFRIMQEAITNVVKHAKAKTVLVRLHREHGE 278 Query: 445 LMLVIEDDGSG--LPPGSGQ----QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + ++ DDG G + GQ +G GL GM+ER +GG + + GT V V++P Sbjct: 279 ITGLVVDDGQGFHVVHTVGQPVRDRGLGLFGMQERAALVGGKVVVESAPGRGTTVRVTVP 338 Query: 497 QR 498 R Sbjct: 339 DR 340 >UniRef50_UPI0001AEC81C periplasmic sensor signal transduction histidine kinase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81C Length = 229 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 119/234 (50%), Gaps = 15/234 (6%) Query: 269 LGAGIQRLRELNQSLQKELARNQ----HLAERLLETEESVRRDVARELHDDIGQTITAIR 324 L I+ ++ L +LQ L +Q LA+RL +ES + ++RELHD IGQ +T Sbjct: 4 LATEIENIKALQATLQARLDADQEVLQQLAKRLWAQQESEKAKLSRELHDGIGQLLT--- 60 Query: 325 TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 G+ +RL A + S + L + + D VR+L + P LDDL L+ A+ L R Sbjct: 61 ---GLTRRLQALSTSSPELEALHGIAEMALND-VRQLSRLMSPTILDDLGLKPALNWLCR 116 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 + L G I H E + L ++ LFR+ QE L N +KH++A+ +TL Sbjct: 117 NL-LSGEDIEYHTEITVPPD-LPKDISTLLFRIAQETLVNAIKHSEATNLTLSISYHHHV 174 Query: 445 LMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + L I D+G G + + G GL+ +R+R A TL I GTR +V++P Sbjct: 175 IRLDILDNGVGFDSKAIEPGIGLSSIRDRAEAFNATLEIDSAVGQGTRTTVTVP 228 >UniRef50_C6J7D3 ATP-binding region ATPase domain-containing protein n=2 Tax=Bacillales RepID=C6J7D3_9BACL Length = 356 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 19/239 (7%) Query: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 ++ A ++++ L Q ++E+ + AE+ + E RR +AR+LHD + Q + AI A Sbjct: 109 MIDAMEKKMQLLQQLGEQEVVEKEQAAEKAVLEE---RRRLARDLHDTVSQQLFAIHMAA 165 Query: 328 GIVQRLAADNASVKQS--GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR----S 381 + ++ +NA+ ++ QLI Q+S +R L+ +LRP +L +L +A+ Sbjct: 166 SSLPKVLENNATQAETVLNQLI-QMSNTAQKQMRALIAQLRPMELVGKSLAEALDQWFPD 224 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 R+ L+G + ++ + D S E+Q LF + QE + NIVKHA AS V+L + Sbjct: 225 YCRQNGLKG---IKDMDIQGDMSEAKEHQ---LFLIIQEAMANIVKHAGASMVSLSLREG 278 Query: 442 DERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 +++L I DDG G +QG +GLT M+ER LGG I GT + V +P+ Sbjct: 279 PRQVVLSISDDGQGFSSTYQKQGSYGLTTMKERAEKLGGNAEIISKPGAGTTIRVHIPK 337 >UniRef50_Q13QX0 Periplasmic Sensor signal transduction Histidine Kinase n=3 Tax=Burkholderia RepID=Q13QX0_BURXL Length = 336 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 13/220 (5%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADN 337 L + ++ LA N+ LA + L+ +E RR +ARELHD++GQ + AI A ++ L +A Sbjct: 94 LEEQAERLLAENRRLANQALQAQELERRHLARELHDELGQYLNAISLDAARIRDLSSARE 153 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 V + + Q + VY + ++ RLRP LD+ L A+ + L Sbjct: 154 PEVHRVSLGLIQSASHVYRQIGGMIRRLRPIGLDEFGLPSALEHCVDGWRERLPDASFSL 213 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL--------QGWQQDERL---- 445 D + LS+ +TL+R+ QEGL N+ K A + V + +QD RL Sbjct: 214 TIEGDFTGLSDALTITLYRLVQEGLTNVSKFARTARVEVFMVRAPREARERQDGRLVDEI 273 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC 485 ++ + DDG G + G GL GMRERV ALGG H++ Sbjct: 274 VVTMADDGPGADLDKPRGGLGLIGMRERVEALGGEFHVAS 313 >UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6J2_9PROT Length = 355 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 109/225 (48%), Gaps = 15/225 (6%) Query: 286 ELARNQH----LAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADNASV 340 EL R+Q + + + +E R +ARE+HD+IG +TAI+ A I +RL + Sbjct: 114 ELLRSQQQLREFSSHIQDAKEQERLRIAREVHDEIGGLLTAIKMDLAWIKERLPKSKKIL 173 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR-GI---VSH 396 IE + A R L LRP LD + AI M E E R GI ++H Sbjct: 174 TDKTSAIENMVGKAMTAARNLAHSLRPGYLDSFGIVAAIE--MEASEFEQRTGIKCLLAH 231 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 E +E L + + LFR+ QE L NI+KH+ A+ V + E + L I D+G G Sbjct: 232 NEEEDEELELHPDVSIALFRIFQEALTNIMKHSRANKVEVLIHNSQEHIELTISDNGCGF 291 Query: 457 PPG--SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 S + FGL G++ERV GG + IS GTRV V +P Sbjct: 292 SQDARSKPRSFGLRGIQERVAHFGGEVSISSTPEQGTRVYVKIPH 336 >UniRef50_A1ASJ6 Multi-sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASJ6_PELPD Length = 1168 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 22/219 (10%) Query: 294 AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV------QRLAADNASVKQSGQLI 347 A R+++ EE++R+ VA ELHD+IG+ +T + ++ + A V+ SG+++ Sbjct: 954 ARRIMDVEENLRKVVAAELHDEIGRDLTVLGINLSLIGTSLPLETAAPLRTRVEDSGRML 1013 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES--A 405 E +S VR ++ LRP LDD L A+R EL R + ++D+ Sbjct: 1014 ESVSR----TVRNIMSTLRPPVLDDYGLAAALRWYG---ELFSRRTGIDVRVQVDDELPR 1066 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-----PPGS 460 ++ + + LFR+ QE L N+ KHA A V L D L+ + DDG GL P Sbjct: 1067 VAAEREIALFRIAQEALTNVAKHAAARNVNLWLAHDDGLLLFSVADDGRGLACGLEPRNP 1126 Query: 461 GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 G+G+T MRER GG + L G V+V +P+ Sbjct: 1127 ESSGWGMTIMRERAELFGGVFRVHALPAGGVGVTVEMPK 1165 >UniRef50_C1A5E7 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E7_GEMAT Length = 558 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 12/202 (5%) Query: 302 ESVRRDVARELHDDIGQTITAIRTQAGIVQR-LAADNASVKQSGQLIEQLSLGVYDAV-- 358 E R+ +ARELHD+ GQ + ++ ++ R L +D V+ +++L L V A Sbjct: 360 EEERQHIARELHDEAGQALVGVKLALQVLSRVLPSDTPHVRAP---LDELRLQVNQATAR 416 Query: 359 -RRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR-IDESALSENQRVTLFR 416 R+L RLRP LD L A+ L+ + E G G HLE +D+ ++ +FR Sbjct: 417 FRQLARRLRPPALDQHGLAAALAQLVHDTEQRG-GFAVHLEVDGLDQRRFPLHE-TAVFR 474 Query: 417 VCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTA 476 + QE L N+ HA A+ V + + +RL++ + DDG G Q G GL G+ ER Sbjct: 475 IVQEALTNVTAHAGATEVRVSVGETAQRLLVRVSDDGCGFDITRSQSGLGLRGIAERAHQ 534 Query: 477 LGGTLHISCLHGTR--VSVSLP 496 LGG ++ GT VSV LP Sbjct: 535 LGGLCDVASQPGTGTVVSVQLP 556 >UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 Tax=Burkholderiaceae RepID=Q2SUK5_BURTA Length = 740 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 26/241 (10%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRR--------------DVARELHDDIGQTIT 321 L+ N L++E+ + E L + E +R +ARELHD++ QT+ Sbjct: 489 LQTANDELRREIVERERAEEALARSREELREIAAISSTAREQERGRIARELHDELAQTLA 548 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSL--GVYDAVRRLLGRLRPRQLDDLTLEQAI 379 +R ++R++ + +G+ E L G A RR+ LRP LDDL L AI Sbjct: 549 MLRLD---LERVSTTGNEL--AGRFTEMRGLLDGAVAATRRIASDLRPLMLDDLGLVPAI 603 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 + L++ + + GI L E L E Q T FR+ QE L N+ +HA AS V ++ Sbjct: 604 QWLVQAFQ-QRHGIGCTLIVDPPELDLVEPQASTTFRILQESLTNVGRHARASHVDIRLI 662 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHISCL--HGTRVSVSL 495 D +ML + D+G G + ++ FGL G+RER + GTL + GT + V + Sbjct: 663 ADDREVMLSVRDNGVGFDTENPRKPNSFGLVGLRERAYLVQGTLSVQTAPGRGTAIEVHI 722 Query: 496 P 496 P Sbjct: 723 P 723 >UniRef50_A5F1R9 Sensor histidine kinase n=52 Tax=Vibrionales RepID=A5F1R9_VIBC3 Length = 451 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 14/201 (6%) Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV----KQSGQLIEQLSLGVYD 356 +E ++ +ARELHD I Q + + + ++ D + K LI + + Sbjct: 247 QEDEKKHLARELHDGINQLLVSSKCHLELLANQLNDPKQIVHLEKSQHSLITAI-----N 301 Query: 357 AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFR 416 VRR+ LRP LDDL L+ A+ +L+ + +L + + L + L TL+R Sbjct: 302 EVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQMEIEML-FDTQPGKLKSEVATTLYR 360 Query: 417 VCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG--QQGFGLTGMRERV 474 V QE LNNI KHA A VT+ Q + L L++ DDG G ++G GL MRERV Sbjct: 361 VVQESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDDGVGFSSKEALQKRGIGLRNMRERV 420 Query: 475 TALGGTLHISCLH--GTRVSV 493 +GG +S GT ++V Sbjct: 421 EFIGGEFELSSEPQLGTEITV 441 >UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRB4_9ACTO Length = 422 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/243 (33%), Positives = 113/243 (46%), Gaps = 38/243 (15%) Query: 275 RLRELNQSLQKELARNQHLAERLLE-------TEESVRRDVARELHDDIGQTITAIRTQA 327 R RE+N L N L RL+E T E R +AR++HD + Q + I TQ Sbjct: 191 RRREVNARLVALADENAALQARLVEQARQAGVTAERAR--LARDMHDTVAQGLAGIVTQ- 247 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++ AD + ++ L+ VRR + LRP LDD L +A L RE++ Sbjct: 248 --LETAEADPDDTARRLRIARDLARDSLVEVRRSVAALRPALLDDADLAEA---LAREVD 302 Query: 388 -----------LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL 436 G L+ +DE+ L RV QE L+N +HA AS + + Sbjct: 303 AWRHRNDIAATFTVTGTPVPLDAAVDEAVL---------RVAQEALSNTARHAKASRLGV 353 Query: 437 QGWQQDERLMLVIEDDGSGLP-PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSV 493 ++ L+L I DDG G +QGFGLT MR+RV L G++HI GT VSV Sbjct: 354 TLSYMEDMLVLDIRDDGEGFAVDAEPRQGFGLTAMRQRVEQLDGSVHIESKPGAGTAVSV 413 Query: 494 SLP 496 SLP Sbjct: 414 SLP 416 >UniRef50_A1S6S1 Sensor histidine kinase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6S1_SHEAM Length = 1046 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 14/235 (5%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 A I++LR+ Q L+ ++LA RL +E R+ ++RELHD GQ++TA + + Sbjct: 814 AVIEKLRQNEQHLKSAFEGMRNLATRLQYAKEEERKSISRELHDQFGQSLTATQISLQLF 873 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE- 389 +R + + + Q + VR + LRP LDD+ L + + +M Sbjct: 874 RRQHPGDPKLIDTCITTIQ---AMIKQVRAISFDLRPSLLDDVGLVAGLHHQLNKMSSSL 930 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 I+ + + I E LS +TLFRV QE + N ++HA+A+ + ++ + +++ + Sbjct: 931 THPIIFNADTDIPE--LSPELTITLFRVIQESVTNAIRHANATRIEVKLYPDGDKIKAEV 988 Query: 450 EDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 D+G G PG S GL G+ ERV + G L+I + G +SV P Sbjct: 989 SDNGVGFEPGGISAKVSKGGHLGLLGIEERVKSQNGNLNIKAIPHGGVSISVEFP 1043 >UniRef50_Q67QN6 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QN6_SYMTH Length = 387 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%) Query: 280 NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS 339 QS + +A + L++ ++ RR +A ++HD +G I A + I AA + Sbjct: 160 RQSHARAVALARSRVSELVQARDAERRRIAHDIHDWLGTGIIAPLRRLEI----AARQSD 215 Query: 340 VKQSGQLIEQLSLGVYDA---VRRLLGRLRPRQLDDLTLEQAIRSLMRE-MELEGRGIVS 395 V+ + +E+ + + A +RRL+ L P L+ + L +A+R+ + + E G + Sbjct: 216 VESCRRHVEEAADSLRRAHAELRRLMENLHPHLLEQMGLAEALRAYLTDWGEEHGVAVHY 275 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 HL + A + + L+R+ QE LNN KHADAS V + +R+ L + DDG G Sbjct: 276 HLTPGPEPPA---DAALALYRIQQEALNNCAKHADASQVWVTLELGADRVRLTLRDDGHG 332 Query: 456 LPPGSGQQGFGLTGMRERVTALGG--TLHISCLHGTRVSVSLPQR 498 P G+ G G+TGM+ER A GG T+H GT V+ LP R Sbjct: 333 RP---GRPGRGITGMQERAAAFGGTVTVHGQPGRGTTVTAELPLR 374 >UniRef50_C4ZL69 Histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=C4ZL69_THASP Length = 464 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 11/233 (4%) Query: 274 QRLRELNQSLQKELARNQH----LAERLLETEESVRRDVARELHDDIGQTITAIRTQAG- 328 Q LR N+ L E+A LA L E+ + +ARELHD++G +TA + A Sbjct: 228 QLLRSENERLHTEVAHRTEELSSLATYLTNAREAEQARLARELHDELGALLTAAKLDAAW 287 Query: 329 IVQRLAADNASVKQS--GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 I ++L AD + +S +L++ L+ G+ R+++ LRP L +L L +A+R+L Sbjct: 288 IARKLPADTVAPMRSRFDRLLDTLNQGIA-LKRKVVAGLRPPLLSELGLLEALRALPDSG 346 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 ++ +G +E + + L+R+ QE L N+ ++A AS+V L+ + + L+ Sbjct: 347 DIGEQGGRLAIELPDALPDVPAQTALALYRIAQEALTNVRRYAQASSVRLRLGVEGDELV 406 Query: 447 LVIEDDGSGLPPGS-GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 L +EDDG G P + G GL GM RV L G L I GTR++ +P Sbjct: 407 LAVEDDGVGFDPAARGHNRHGLAGMAHRVQMLAGRLEIDSAPGKGTRITARVP 459 >UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX1_CLOTH Length = 392 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 16/230 (6%) Query: 280 NQSLQ-KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA-ADN 337 N SLQ +++ + + L R+++ +E R+ VARE+HD Q+++ I +A I +RL +D Sbjct: 156 NVSLQIEDMKQRRLLGIRIIKAQEEERQRVAREIHDGPAQSMSNIVLKAEICERLVDSDP 215 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL--EGRGIVS 395 K + ++ + VR+++ LRP LDDL L I +L R +E E GI Sbjct: 216 EKAKDELRTLKSVVRDTLRDVRKIIYDLRPMSLDDLGL---IPTLQRYIETCREESGIKI 272 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 + R L +T+FR+ QE +NNI KHA A VT+ ++ L L I D+G G Sbjct: 273 TFKTRGTCEQLKPVVSLTVFRLVQEAVNNIKKHARADKVTINLEFLEKELKLYIADNGVG 332 Query: 456 LPPGSGQ-------QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 S + +GFGL MRERV L G I GTR+++++P Sbjct: 333 FDFDSLKSNEEDINKGFGLISMRERVELLDGKFEIDSAVGKGTRLNITVP 382 >UniRef50_B7L2Y8 Histidine kinase n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L2Y8_METC4 Length = 478 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 6/206 (2%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 L L++ A + L +RL + +E RR +ARELHD+ GQ +TA A ++ A D Sbjct: 227 LGHRLERSTAERKVLTQRLFQVQEEERRTLARELHDEFGQCLTATGALAAAIEAGAPDRP 286 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 + + + I +++ + +R L LRP L++ L++A++ L+ + R L Sbjct: 287 DLHEDARAISRITRQMMQTLREALAHLRPPDLEEFGLQRALQRLVATWQ---RRETPTLR 343 Query: 399 WRIDE--SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 +D S + ++L+RV QE L N V+H + V++ + + +++ DDG G+ Sbjct: 344 LAVDGNLSGVPGPVALSLYRVVQECLTNAVRHGRPTDVSVHLGVSVDAVTVIVRDDGGGV 403 Query: 457 PPG-SGQQGFGLTGMRERVTALGGTL 481 P G +G GL GMRERV ALGG L Sbjct: 404 PGDIIGAEGHGLLGMRERVEALGGRL 429 >UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R2_SOLUE Length = 838 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 126/255 (49%), Gaps = 10/255 (3%) Query: 250 DHPVDLLLSLLVQSLTGLLLGA---GIQRLRELNQSLQKELARNQHLAERLLETEESVRR 306 + P+++ LS VQ+ G L A I + ++ +LQ+ + + LA L+ +E RR Sbjct: 580 EFPIEVSLSS-VQTSEGTLSVAFVSDITKRKQAEAALQRSESELRALARSLITAQEDERR 638 Query: 307 DVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRL 365 VAR+LHDD+ Q + + + G + + +++ + + + + VRRL L Sbjct: 639 RVARDLHDDVTQRLALLSIEIGKLATETSGSVEEIRKRLRYFQSQARLASNEVRRLSHGL 698 Query: 366 RPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNI 425 P ++D L A+ +E +GI + + ++ LS L+RV QE L N+ Sbjct: 699 HPSVIEDFGLSTALEDFCQEF-ARAQGITLIFDALVADAVLSAGDASCLYRVAQECLRNV 757 Query: 426 VKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHI 483 KH+ A+ V + + + L I+D+GSG G+ + +G GL M+ERV GTL I Sbjct: 758 AKHSGATEVRVGIARDGANVRLTIKDNGSGFHAGADRVNKGLGLVSMKERVKMANGTLLI 817 Query: 484 SCL--HGTRVSVSLP 496 + GT + S+P Sbjct: 818 TSQPGQGTEIVASVP 832 >UniRef50_Q7NNR3 Glr0347 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNR3_GLOVI Length = 402 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%) Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLG 363 R +AR++HD +G T+TA+ + + Q L D +Q+ +QLS VR + Sbjct: 213 RARIARDIHDSLGHTLTALDVKLEVAQELYCRDPDRARQAVHTAKQLSGQCLQDVRLAVQ 272 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 +R L L+ A+ L ++ + R + +E ID L L+ + QEGL Sbjct: 273 AMRR---PPLHLDAALEGLAEQVR-QNRALA--VEVHIDLPQLPLQTSHQLYCIVQEGLT 326 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI 483 NI +HA A+ V+L+ + + L + DDG G P + GFGL GM ER+ LGG+L I Sbjct: 327 NIQRHARAARVSLRACHTPQSVTLELWDDGQGFDPQATHGGFGLRGMHERMQVLGGSLAI 386 Query: 484 SCL--HGTRVSVSLPQ 497 + GTR+ +S+P+ Sbjct: 387 ASAPGRGTRIRLSVPR 402 >UniRef50_A6GQJ7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GQJ7_9BURK Length = 362 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 3/224 (1%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 +R+ E LQK R + L+ L E R +ARE+HDD+G +TA + + Sbjct: 132 RRVIERTAQLQKAHDRMRRLSAHLTTVREEERTRIAREMHDDLGAKLTAFDLELKALSYR 191 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 A++ + + + L+ G +++RR+L LRP LD L L A+ L+ E + + Sbjct: 192 CANDQKLTVRIESMLDLAQGAMESLRRILSDLRPGVLDHLGLWAAVEHLLGEFSQRTK-V 250 Query: 394 VSHLEW--RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 VS L+ ++ LS+ L+R+ QE LNN+ KH+ AS V + + ++ ++D Sbjct: 251 VSVLDIAPELEHVRLSKATETALYRILQEALNNVSKHSGASKVEVTVNTEGRAVVFQVKD 310 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 +G G+ + GFGL G+ ER +G I + G V + L Sbjct: 311 NGRGMAVRTFNAGFGLMGIEERAWDIGARCTIDSILGQGVCIKL 354 >UniRef50_A1K5L6 Putative two-component sensor histidine kinase n=1 Tax=Azoarcus sp. BH72 RepID=A1K5L6_AZOSB Length = 491 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 128/233 (54%), Gaps = 9/233 (3%) Query: 273 IQRLRELNQSLQKEL----ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 +R+ E SL +L A + LA LL+ E+ RR +ARELHDD+GQ +T++R + Sbjct: 251 FRRIGEDFNSLASQLGETRAAERRLATGLLDAREAERRHLARELHDDMGQHLTSLRAETA 310 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++ A +NA+++ S IE ++++V+ ++ RLRP LD L + +R L+RE+ Sbjct: 311 FLRHGAGENAALQPSLDSIEASLAQLHESVQDIVHRLRPPGLDAFGLGECLRQLVREVRR 370 Query: 389 --EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 +G + + L D AL +R+ QEGL N ++HA AS V + + Sbjct: 371 RPDGTAVATTLTLDGDIDALPGECAAHAYRIVQEGLTNALRHARASRVAVTLACAAGSVT 430 Query: 447 LVIEDDG-SGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + + DDG + G G+ G GL G+ ERV ALGG++ ++ L G R++ + P Sbjct: 431 VEVTDDGVADAINGGGRGGHGLAGIAERVAALGGSVELAPLATGGMRLAAAWP 483 >UniRef50_C4DDE2 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDE2_9ACTO Length = 380 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 QR E +S E R++ + EE VR +ARELHD + I+ + Q+ + + Sbjct: 152 QRALESARSRAAEAERSKEELAQRRAAEERVR--IARELHDSLTHAISVVNVQSSVALHM 209 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 N +Q+ + + DA+R L LR ++ + I SL +E I Sbjct: 210 L--NRQPEQAEASLRNIRAASQDAMRELRATLRALRMTEGDSTPGIDSLPALVERSALTI 267 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 ++ D AL E T++R+ QE L N +HA ASAV + DE + I DDG Sbjct: 268 A--MDISPDRQALPETVDRTVYRIVQEALTNSTRHARASAVDISIVVDDESVTTTITDDG 325 Query: 454 SGLPPGSGQQGFGLTGMRERVTALGGTLH 482 G P +G GL GMRERV ALGG L Sbjct: 326 IGPAPEGVAEGLGLMGMRERVAALGGDLR 354 >UniRef50_A8VSA0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSA0_9BACI Length = 382 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 123/224 (54%), Gaps = 14/224 (6%) Query: 275 RLRELNQSLQKELA-RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 +L+E + L+ ELA NQ +A+ L++ EE R ++R+LHD +GQ ++ I ++ + +L Sbjct: 153 KLKE--EKLEDELAFANQKIAD-LIKLEE--RERISRDLHDTLGQKLSMIGIKSDLAGKL 207 Query: 334 -AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 D+ + + ++Q + +R L+ +R +L ++ + + + ++ G G Sbjct: 208 IMKDHHKAEAEIKEVQQTARTALKELRELVADMRRSKL-----KEEMERVTQLLDAAGIG 262 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 + E + E+ + V++ +E + NIVKH+ AS + DE+L++ IEDD Sbjct: 263 LTVSGERELPENLARIDHVVSM--CVKEAVTNIVKHSQASECRISIATHDEKLIIRIEDD 320 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 G G+P + G G++G++ER+ + GTL I GT +++++P Sbjct: 321 GKGMPMEKFRYGGGISGIKERLQFINGTLEIVSEQGTALTMTIP 364 >UniRef50_A0LNB4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNB4_SYNFM Length = 784 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 10/234 (4%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR--TQAGIV 330 I ++L +++ + ++L+ RLL +E R+ VA ELHD IGQ++ AI+ + + Sbjct: 537 ITERKKLEMAIKDSERQLKYLSSRLLTAQEEERKRVAAELHDSIGQSLAAIKYGVENAVR 596 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 +A +V S L+ + G + RRL LRP LDDL + I L +E Sbjct: 597 YGASAGEETVFHSLGLLIPIIQGAIEEARRLYMGLRPSMLDDLGVIVTIDWLCKEFRRNY 656 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 + ++E + E+ ++ +FRV +E LNNI +H+ A V + + L + Sbjct: 657 PEMRISERIELEEDCIPESLKIVIFRVVEEALNNISRHSRAEGVEVALSISGGAIRLDVA 716 Query: 451 DDGSGLPPGS------GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 DDG G S ++GFGL GMRERV GG+L +S + GT VSVS P Sbjct: 717 DDGVGFDQDSLHHAVESEKGFGLAGMRERVALSGGSLSVSSIRGKGTTVSVSWP 770 >UniRef50_C2DYY1 Two-component system histidine kinase n=8 Tax=Lactobacillus jensenii RepID=C2DYY1_9LACO Length = 441 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 13/221 (5%) Query: 280 NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN-A 338 N LQ A + H+AE + R+ +AR+LHD +G +T + + L N Sbjct: 227 NLELQNYAALSSHIAE------DRERKRIARDLHDSVGHALTGVIAGVDAAKVLIDLNPE 280 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM-ELEGRGIVSHL 397 K+ + Q+ + +R L +LRP L++ TL+ A++ ++ E EL Sbjct: 281 KAKEQLTKVSQVVKQGLEGIRAALNKLRPGALENYTLQAALKKMLSEYSELSQMKFDFQY 340 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 +W + + +FR+ +E + N ++H AS V++ + ++ ++I+D+GSG Sbjct: 341 DW--GSAEFEKTTEDVIFRIVEESVTNALRHGHASQVSIH-FLVNKNYQILIKDNGSGC- 396 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 + GFGLT M+ERV +GG + G V V +P+ Sbjct: 397 -SKIKPGFGLTQMKERVAIIGGHIEFKSGDGFEVKVDIPKE 436 >UniRef50_A8FUN8 Two-component sensor NarX n=3 Tax=Shewanella RepID=A8FUN8_SHESH Length = 591 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 10/212 (4%) Query: 286 ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQ 345 EL + ++ RLL EE R +ARELHD + Q+++ ++ Q ++ R +Q + Sbjct: 378 ELEQKKNTENRLLIAEE--RAVIARELHDSLAQSLSFLKVQMSLLTRKMQKGLPEEQVNE 435 Query: 346 LIEQLSLGVYDA---VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 I + G+ A +R LL R + LDD +LE A++ + E + + + L + I Sbjct: 436 TINDIKQGLNHAYLQLRELLTTFRLK-LDDPSLENALQGTVAEFAEKCQHAI-ELNFEIP 493 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 ++ L+ NQ + + ++ +E L+N+ +HA+AS + ++D+++ L I D+G GLP Q Sbjct: 494 QNYLTANQEIHVLQIIRESLSNVHRHAEASLAGVNLIKEDDKIKLAIWDNGRGLPSNLEQ 553 Query: 463 QG-FGLTGMRERVTALGGTLHI--SCLHGTRV 491 QG FGL M+ER +L L + GT+V Sbjct: 554 QGHFGLGIMKERAKSLNSVLAFEPNSPSGTKV 585 >UniRef50_C7TK00 Two component sensor transduction histidine kinase n=9 Tax=Lactobacillus RepID=C7TK00_LACRL Length = 354 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 124/239 (51%), Gaps = 15/239 (6%) Query: 270 GAGIQRLRELNQSLQKELARNQHLAERLL-ETEESV----RRDVARELHDDIGQTITAIR 324 A ++ LR+ LQ+E+ R + R ET E++ R +ARELHD + Q + A Sbjct: 111 AALLEALRQKMIRLQREIERYSNTPVRFSGETREAILTGERHRLARELHDSVSQQLFAAM 170 Query: 325 TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDA---VRRLLGRLRPRQLDDLTLEQAIRS 381 ++ +AA + + + ++ + + +A +R LL LRP L+ +L+Q I Sbjct: 171 MMLSALRSVAARDPKQEALNKQLDTIQKVINEAQAEMRALLLHLRPTNLEGKSLKQGIIQ 230 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 L++E++ + I + W++D+ L+ LFR+ QE L+N ++HA A ++ + + Sbjct: 231 LLKELQTK---ITIKITWQLDDIQLNAAAEDNLFRIVQELLSNTLRHAKADSLEVYLKRL 287 Query: 442 DERLMLVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + ++L + DDG G P S +GL ++ER A+GGT + + GT V V +P Sbjct: 288 QDMVILRMVDDGVGFDPKETSSNGNYGLANIKERAAAMGGTAKVVSVVGQGTSVEVRVP 346 >UniRef50_Q1J3L3 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J3L3_DEIGD Length = 412 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 105/200 (52%), Gaps = 14/200 (7%) Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ---LSLGVYDAVRRL 361 R +ARELHD +G +T I Q +RL N +++ L E+ LS +R Sbjct: 212 RTRLARELHDTLGHALTTITVQLEAGERLLEKNP--QKARTLFERSRDLSRSATAELRAS 269 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 LG LR ++ L E +R+L R + +G ++ ++ E +LS Q L RV +E Sbjct: 270 LGELRRGEMGSLGDE--LRALARSGDPDG----PQVDVQVAEVSLSPQQEHALARVAREA 323 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGT 480 L+N+ +HA A+ V L + E L+L + DDG G P G +GL+GMRER+ LGG Sbjct: 324 LHNVRRHAGAAHVRLDLRRTPEGLVLQVTDDGLGFDPSLVPAGHYGLSGMRERLALLGGH 383 Query: 481 LHISCL--HGTRVSVSLPQR 498 L I GTR++ +LP R Sbjct: 384 LTIDSQPGQGTRLTATLPLR 403 >UniRef50_Q47H96 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H96_DECAR Length = 462 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 12/218 (5%) Query: 290 NQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ 349 + +AER+ ++ R+ +ARELHD++ Q ITA+R AG + + D ++ Q I Sbjct: 242 EREVAERMQAGLQAERQVIARELHDELAQGITAVRALAGAIVQRTPDEPALHIPAQSIVA 301 Query: 350 LSLGVYDAVRRLLGRLRPRQLDDL--TLEQAIRS-LMREMELEGRGIVSHLEWRIDESAL 406 ++ + D VR +L RLRP L L++ + + ++ ++E ++SHL I + + Sbjct: 302 VTGEMQDGVRNILHRLRPPVGSSLVVALDRHLGNWRLQHPDVE---LLSHLA--IVDRPV 356 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ--G 464 +++ T+ R QEGL N+V+HA AS V L+ +++ L L + D+G G S G Sbjct: 357 ADDLAATVLRCVQEGLTNVVRHAAASRVELRLFREAGWLHLSLADNGRGQVEKSTNAGCG 416 Query: 465 FGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRYV 500 GLTGM ER++A+GG L +S G + V LP ++ Sbjct: 417 LGLTGMAERISAIGGHLRLSSPLGQGFCIDVRLPDVHI 454 >UniRef50_Q3SGQ9 Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SGQ9_THIDA Length = 457 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 4/220 (1%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAAD- 336 L+ +Q A +LA L + ES + +ARELHD++G +TA + A I ++L + Sbjct: 235 LDHEVQLRTAELTNLATYLTDVRESEKLHLARELHDELGALLTAAKLDADWIERKLPPEM 294 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 A V+Q + Q +G RR+ LRP L DL L +A++SL+ E +G ++ Sbjct: 295 RALVEQRLTRLRQSLVGGITLKRRITNNLRPALLYDLGLIEALKSLVAEFREDGEADIT- 353 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 E D LSE ++LFR+ QE L N+ K+A A V + + + + L I DDG G Sbjct: 354 AELPEDCPELSEEVSLSLFRIVQEALTNVRKYAQAKHVHIALRTKSDAVELSITDDGVGF 413 Query: 457 PPGSGQQG-FGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 P S + GL G++ RV GG L I G V++S+ Sbjct: 414 DPHSPKVARHGLAGIKHRVFDHGGQLDIRTAPGKGVAISV 453 >UniRef50_B1HRK4 Sensor protein n=2 Tax=Bacillaceae RepID=B1HRK4_LYSSC Length = 346 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 14/218 (6%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 S ++ A ++ + ER++ + R+ +ARELHD + Q + A + + S+K Sbjct: 124 SNERAEAHDKIIQERIV----AERQRLARELHDSVSQQLFAASMLLSALTESDENATSLK 179 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 Q ++++Q L +R LL LRP L + TL Q + L+ E++ + + H+E+ + Sbjct: 180 QVEKIVQQAQL----EMRALLLHLRPVALRNKTLAQGLEELIIELQ---QKVYFHIEYEL 232 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP-PGS 460 +E AL++ + LFR+ QE L+N ++HA AS V L +D+ +L I+D+G G Sbjct: 233 EEMALTKAEEDHLFRIAQEALSNTLRHAKASEVELLLVARDDLAILRIQDNGLGFDVEAD 292 Query: 461 GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 +GL + ER +G T I + GT V V +P Sbjct: 293 KSTSYGLQNIAERAVEIGCTYKIVSVPEEGTIVEVKIP 330 >UniRef50_C4IB15 Two component system histidine kinase n=3 Tax=Clostridiales RepID=C4IB15_CLOBU Length = 268 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 16/234 (6%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L L+ +N LQ + E++ ET E R +ARE+HD IG +T I AG Sbjct: 35 LNKANDELKVMNIKLQDYAEK----TEKMTETRE--RNRLAREIHDTIGHALTGI--IAG 86 Query: 329 IVQRLAADN---ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 I L + SVK +I +++ + VRR + LRP L++L L+ AI ++ E Sbjct: 87 IDACLTIIDYSPESVKNQLTIISKVARQGINDVRRSVKALRPDVLENLYLKDAIEKMIDE 146 Query: 386 MELEGR-GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 M + I+ E I E ++ ++RV QE + N ++H ++ + + + + + Sbjct: 147 MRTTSKCNII--FENEIGELKFDSDEEDAIYRVIQESITNSIRHGKSTKIYVTLYMKKKD 204 Query: 445 LMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 L+L+I D+G G ++GFG+ MRERV L GT++ +G + +P R Sbjct: 205 LILIITDNGIGCK--DIKKGFGIQHMRERVELLNGTINFEGKNGFTIIAHIPIR 256 >UniRef50_A0LKW7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKW7_SYNFM Length = 535 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 41/258 (15%) Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARN---------QHLAERLLETEESVRRDVARELH 313 + G ++GA IQ +R++ ++ AR+ ++L+ +LL E R+ +ARELH Sbjct: 268 DVKGDIIGA-IQSIRDITD---RKRARDALLESERQLRNLSAQLLRAHEEERKRIARELH 323 Query: 314 DDIGQTITAIRTQAGIVQRLAADNA-SVKQSGQLIEQLSL---------GVYDAVRRLLG 363 D GQ++ A++ DNA ++K+ G+ E + + RR+ Sbjct: 324 DSTGQSLAALK--------FYVDNALNMKERGKPDEMANCLDRMVPLIRNAIEEARRIYM 375 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID--ESALSENQRVTLFRVCQEG 421 LRP LDDL + I+ RE ++ +++ RID E + E+ ++ +FR+ QE Sbjct: 376 GLRPSILDDLGIIATIQWYCRE--VQKTCPKTNILERIDVQEDKIPEDIKIVIFRLVQES 433 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG------LPPGSGQQGFGLTGMRERVT 475 LNNI+K+ A VT+ + L+++D+G G L + +G GL GMRER+ Sbjct: 434 LNNIIKYGKAERVTISLVSTSSAIELIVQDNGVGFDLDAYLHTENRNRGLGLAGMRERME 493 Query: 476 ALGGTLHISCLHGTRVSV 493 GGT I + G ++ Sbjct: 494 LSGGTFSIQSIIGEGTTI 511 >UniRef50_A1ATT5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATT5_PELPD Length = 381 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 130/253 (51%), Gaps = 25/253 (9%) Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERL------LETEESVRRDVAR 310 L ++V+ TG +L E ++L++E AR Q + + LE +E R VAR Sbjct: 139 LEIVVEERTG--------QLNETMEALRQETARRQQIETNVTTMRENLENQERAR--VAR 188 Query: 311 ELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQS-GQLIEQLSLGVYDAVRRLLGRLRPR 368 ++HD IGQT+ AI+ Q I Q R Q+ ++I +L+ + +R ++ LRP Sbjct: 189 DIHDGIGQTLQAIKLQLKIRQARCREGEPCGGQALNEIIGELTSAATE-LREIILALRPL 247 Query: 369 QLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKH 428 L+D L+ A+RSL E + G+ E + L + ++++FR+CQE L NIVKH Sbjct: 248 FLEDTDLDLAVRSLC-ERSAKRTGLDVRAECQGSFRGLGSSFKLSIFRICQEALTNIVKH 306 Query: 429 ADASAVTLQGWQQDERLMLVIEDDGSG---LPPGSGQQGFGLTGMRERVTALGGTLHISC 485 + + ++ ++ + + I DDG G P Q+G GL MRER LGG L + Sbjct: 307 SGCRSALIRLEREPHTMRITIRDDGRGGVSCPTIISQEGSGLAIMRERAELLGGALSVIS 366 Query: 486 LH--GTRVSVSLP 496 GT ++V +P Sbjct: 367 PPGMGTAITVEVP 379 >UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT7_THEAQ Length = 564 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 14/221 (6%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 L ++L ++ A+ L + L+ +E R +ARELHD++GQ +T + ++ L D Sbjct: 350 LYEALAEKEAQRARLLKAWLKAQEEERARIARELHDEVGQALTGLILG---LEGLPGDRV 406 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 + +++L+ VRRL LRP LD L LE A+R +RE E G+ L Sbjct: 407 ------EALKELARHTLTEVRRLALDLRPSVLDHLGLEAALRRYVREF-AERTGVEVDLS 459 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 + L + ++RV QE L N+ +H+ + ++ + + + +ED+G G P Sbjct: 460 LHLTRP-LPQELETVVYRVVQEALTNVARHSGSPQASVGVVEVLGEVRVFVEDEGRGFDP 518 Query: 459 GSGQQGF-GLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + G GL GMRERV LGG L + GTRV V LP Sbjct: 519 EAVDPGRQGLLGMRERVELLGGRLSVESAPGQGTRVQVRLP 559 >UniRef50_D2B5X3 Signal transduction histidine kinase-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B5X3_STRRD Length = 380 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 96/197 (48%), Gaps = 7/197 (3%) Query: 308 VARELHDDIGQTITAIRTQAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 +ARELHD +G I+ I QAG R+ + + I++ S +R LG LR Sbjct: 186 IARELHDTLGHNISMINVQAGAALHRIKDRPGQAETALATIKEASKEALRELRATLGVLR 245 Query: 367 PRQLDDLTLEQAIRSLMREMELEGR-GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNI 425 Q+D+ + SL R EL R G+ +E + AL R+ QE L N+ Sbjct: 246 --QVDEDSPTGPAPSLARIRELADRIGLSVRIEILGEPRALPAEVDHAAVRIIQEALTNV 303 Query: 426 VKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC 485 +H+ A A + D L L I+D G G P S + GFG+ GMRER TALGG+L Sbjct: 304 TRHSGAGAAEVVIRYGDADLTLRIDDHGPGAWPRS-ETGFGIIGMRERATALGGSLEAGD 362 Query: 486 LH--GTRVSVSLPQRYV 500 H G RVS LP R + Sbjct: 363 RHTGGFRVSARLPLRGI 379 >UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM57_MEIRU Length = 430 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 6/195 (3%) Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGR 364 R+ +ARE+HD + Q +I Q + + AS + Q + RR++ Sbjct: 226 RQRLAREIHDTLAQGFASIVVQLEAAEMASEHEASATHYLEQARQAAREGLSEARRMVWA 285 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 LRP L++ +L +A++ L++ + E G+ + L V L R+ QE L N Sbjct: 286 LRPEILENTSLPEALQRLLQRWQQES-GVRTQFTLTGTPRPLHPELEVGLLRIAQEALTN 344 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGL-PPGSGQQGFGLTGMRERVTALGG--TL 481 I KHA A L D+ +++ ++DDG GL P +G GFGL MRERV +LGG TL Sbjct: 345 IRKHAKARHANLTLSYLDDLVLMDVQDDGVGLQAPTTG--GFGLRLMRERVESLGGQMTL 402 Query: 482 HISCLHGTRVSVSLP 496 GT ++VSLP Sbjct: 403 ESEPGMGTTLAVSLP 417 >UniRef50_B8CZJ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ7_HALOH Length = 352 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%) Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRL--AADNASVKQSGQLIEQLSLGVYDAVRRLL 362 R +ARELHD + Q + I ++ L D+ V+++ + ++++ V +R ++ Sbjct: 155 RNRIARELHDSVSQNLFGINLNLNTLEVLIDEGDHDRVRKTVEDLKKMVQEVQTEMRLMI 214 Query: 363 GRLRPRQLDDLTLEQAIRSLM----REMELEGRGIVSHLEWRIDESALSENQRVTLFRVC 418 L+P L + +A+ SL+ L+ I +HL +E+ + ++ L+RV Sbjct: 215 YELKPVHLREKDFFEALESLVELYRNRYNLK---ITTHLNG--NENRVESEVQLALYRVA 269 Query: 419 QEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG---FGLTGMRERVT 475 QE LNNIVKHADA V++ + + + I+D+G G G + G FG++GM++RV Sbjct: 270 QEALNNIVKHADADKVSITLGIGNNGITMAIKDNGKGFNVGRVKAGSGRFGISGMKDRVN 329 Query: 476 ALGGTLHISCL--HGTRVSVSL 495 +GG I GT V VS+ Sbjct: 330 DVGGDFDIESQPGQGTTVKVSI 351 >UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4J6C1_DESRM Length = 379 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 13/216 (6%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLI--E 348 Q L ++ +E R+ VARE+HD Q++ I +A +L N S+ +L+ + Sbjct: 164 QQLGISIIRAQEEERKRVAREIHDGPAQSMANIVMRAEFCLKLLEMNPSM-VGNELVSLQ 222 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSE 408 QL VR+++ LRP LDDL L A++ + + +++ I + + E Sbjct: 223 QLVRQSLQDVRKIIFDLRPMVLDDLGLIPAVKRYLEDYKVQN-NISADFVFIGKEQRFDA 281 Query: 409 NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL------PPGSGQ 462 + V +FR+ QE L NI KHA A V ++ R+ + I+DDG G P G G Sbjct: 282 SMEVAVFRIIQEALINIKKHAAARHVLIKMELISSRINVYIKDDGCGFVVGHIKPRGDG- 340 Query: 463 QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G+GL GMRER+ L GTL I+ GT ++ SLP Sbjct: 341 SGYGLLGMRERIQLLKGTLSINSTPGKGTELNFSLP 376 >UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJS5_BREBN Length = 365 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 129/258 (50%), Gaps = 12/258 (4%) Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQH-LAERLLETEES 303 +++ D+PV + L G L + LR+++ + E R Q+ L ++ +E Sbjct: 98 TKSGVDYPVAASSARLEDESQGKL----VMILRDMSAQQRVEKERYQYKLTNFAIQAQEE 153 Query: 304 VRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 R+ +ARELHD +GQ + +I +V++ ++ +L+ S + + V+R+ Sbjct: 154 ERKRIARELHDGVGQALYSILVGLNVVRQRELSEPVMQHVAELVNMTSKAM-EEVKRMAL 212 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP LDDL L A+RSLM+ +E + I L + ++ S L+R+ QE + Sbjct: 213 ELRPSALDDLGLLPALRSLMKRVE-KTFHIQVELHVQGEKRRYSAAMETALYRIVQEAMT 271 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG---QQGFGLTGMRERVTALGGT 480 N K+A AS + + +++ +++ I DDG G +G G+ GM+ER LGGT Sbjct: 272 NTAKYAKASHLGIMFENREKEIVVTIVDDGVGFEVEKTLKIGKGLGVFGMKERAQLLGGT 331 Query: 481 LHISCL--HGTRVSVSLP 496 + I GT V V +P Sbjct: 332 VDIRSAPEEGTTVIVRIP 349 >UniRef50_Q220B2 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B2_RHOFD Length = 359 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 11/214 (5%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQL 350 Q L+ R+LE +E RR VA ELHD++GQ++TAI+ + +RL D +S + + + I ++ Sbjct: 141 QALSRRVLEAQEFERRRVAIELHDELGQSLTAIKINLQLSERL-HDGSSSELNAENI-RI 198 Query: 351 SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQ 410 VRRL LRP LDDL L A++ + + V + + L+ + Sbjct: 199 VEDALQQVRRLATGLRPAMLDDLGLSPAVQWIAEVIAARSNFTVHFCPEDMPQR-LAPDI 257 Query: 411 RVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ------G 464 FR+ QE L NI +HA A VT+ + L+L ++DDG+G + ++ Sbjct: 258 ETACFRIVQEALTNISRHAQAKRVTITLRRMSNALLLCVQDDGNGFDLHAMRERAMLGGS 317 Query: 465 FGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 G+ GM+ER +GG L I G+ V +S P Sbjct: 318 IGVLGMQERAMLIGGQLDIESAPGLGSMVQLSCP 351 >UniRef50_B5WB73 Histidine kinase n=1 Tax=Burkholderia sp. H160 RepID=B5WB73_9BURK Length = 232 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 5/191 (2%) Query: 309 ARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPR 368 ARE+HD +G +TAI+ A + A + + + LI + G+ D VR + L P Sbjct: 36 AREVHDVLGGILTAIKMDANRILERAKASDLAEIANDLITSVQEGI-DVVREVSESLHPA 94 Query: 369 QLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKH 428 LD L L+ AIR+ + G+ S L L+ Q++ +R+ QE L N+V+H Sbjct: 95 ALDHLGLDAAIRNHLDRF-CPRHGLSSELSLNRSLPLLTSVQKLAAYRIFQEALTNVVRH 153 Query: 429 ADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHI--SC 485 A+A+ V ++ D +L L +EDDG G+ P S + G G+ GMRER +GG + Sbjct: 154 ANATRVVVRLISGDRKLELFVEDDGVGVDPPSRRAGAMGIVGMRERARDVGGEFLVLPRT 213 Query: 486 LHGTRVSVSLP 496 GT + +S P Sbjct: 214 PRGTCIKLSFP 224 >UniRef50_Q38VV9 Two-component system, sensor histidine kinase n=54 Tax=Bacilli RepID=Q38VV9_LACSS Length = 354 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 14/209 (6%) Query: 299 ETEESV----RRDVARELHDDIGQTITAIRTQAGIVQRLA---ADNASVKQSGQLIEQLS 351 ET+E + R +ARELHD + Q + A + +A ADN + QS +E++ Sbjct: 143 ETKEEILAQERHRLARELHDSVSQQLFAATMMLSALSEVAQKQADNPQLLQSLTTVERVL 202 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 +R LL LRP L+ +L I L+ E++ + I + W ID L Sbjct: 203 NDAQSEMRALLLHLRPVTLEGKSLRDGIIQLLNELKTK---IAVEITWDIDNVTLPSGIE 259 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG--FGLTG 469 LFR+ QE L+N ++HA A + + + + ++L + DDG G P Q+ +GL Sbjct: 260 DNLFRIVQELLSNTLRHAKAQEIEVYLKKIGQTVLLKVMDDGQGFDPKVAQKAGSYGLNN 319 Query: 470 MRERVTALGGTLHISCL--HGTRVSVSLP 496 + ER ++GGT I L GT V + +P Sbjct: 320 ITERAQSVGGTAKIISLPNQGTSVEIRVP 348 >UniRef50_A9KLX5 Histidine kinase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLX5_CLOPH Length = 366 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 25/302 (8%) Query: 210 FTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLL 269 F+P+ + I + L L N I L+ + L+LS L T LL Sbjct: 68 FSPYEDSKKIKEEDYIKKELEQLKDNLPNIINLLEQHYDLKNKYQLILSCL----TNLLD 123 Query: 270 GAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 I ++ +EL ++ L ++LE +E R+ +A +LHD Q +T++ + + Sbjct: 124 RQHIDLKAFESEVCTEELINHEALGLKILEAQELERQRIAMDLHDSTVQNLTSLVHKTEL 183 Query: 330 VQRLAA-DNASVK-QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 +L D K + +IE + + D +R ++ LRP L+DL L+ AI + + Sbjct: 184 CIKLFDLDAIRAKLELATMIENIRTIIND-MREIIYDLRPMTLNDLGLKAAIERYVDNFK 242 Query: 388 LEGR--GIVSHLEWRIDESALSENQ--RVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 + I+S IDE+ +NQ +T++R+ QE NNI KHA A+ + Q++E Sbjct: 243 RHNKIQVIIS-----IDENFEIKNQVVSITIYRIIQEAFNNISKHAKATTCIIDLSQKEE 297 Query: 444 RLMLVIEDDGSGLPPGSGQQ-------GFGLTGMRERVTALGG--TLHISCLHGTRVSVS 494 + L IED+G GL S + GFGL+ M ERV L G +L + GT++ VS Sbjct: 298 VIQLTIEDNGIGLEESSKCKDTTCKNCGFGLSNMSERVYLLSGKFSLESNNNSGTKIIVS 357 Query: 495 LP 496 +P Sbjct: 358 IP 359 >UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS5_HALO1 Length = 509 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 24/234 (10%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD 336 ++ + ++ + Q A R+L +E+ R+ ++RELHD IGQ + +V RL A+ Sbjct: 268 KQADDKIRAAVLAKQAFASRILGAQEAERQHLSRELHDSIGQLL--------LVHRLEAE 319 Query: 337 -NASVKQSG---QLIEQLSLGVYDA---VRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 A+ + G E L G+ + VR L LRP +DDL +E A+ +L ++ Sbjct: 320 WLANQLEPGPERDATEHLCTGLDETLHLVRTLAMDLRPPAIDDLGIESALETLCVDL--- 376 Query: 390 GR--GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 GR G+ E + L VTL+R+ QE L N +H+ + + Q D L L Sbjct: 377 GRRAGVRCEFENSVALPGLRTEIGVTLYRIAQEALANAARHSGCRTIRVVLAQHDSTLEL 436 Query: 448 VIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQ 497 + DDG G+ P + FGL MRER +GG + I S HGT + V++P Sbjct: 437 SVSDDGVGIAPERLADDASFGLISMRERAELIGGHVSIRSSPKHGTHIRVAIPH 490 >UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE28_9LACT Length = 355 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%) Query: 299 ETEESV----RRDVARELHDDIGQTI-TAIRTQAGIVQRLAADNASVKQSGQLIEQLSLG 353 ET+E V RR +ARELHD + Q + A+ + + +R + ++ +IE + Sbjct: 143 ETKEQVIEQERRRIARELHDSVSQQLFAAMMMISALNERKQHFDEKEQKQLAMIEHVLSQ 202 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 +R LL LRP L++ +L+ I L+ E++ + + + W I++ L E Sbjct: 203 AQSEMRALLLHLRPISLENKSLKSGIEGLLVELQTK---VQMKIHWDIEDVTLPEGVEDH 259 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRE 472 LFR+ QE L+N ++H+ A + + Q+D ++ IEDDG G G +G+ M+E Sbjct: 260 LFRIAQELLSNTLRHSHAKHLEVYLRQKDSNVIFKIEDDGVGFNVDDIHTGSYGINNMKE 319 Query: 473 RVTALGGTLHISCL--HGTRVSVSLP 496 RV LGG + I GT + + +P Sbjct: 320 RVQGLGGQVKIVSFPNQGTTIEIKIP 345 >UniRef50_A6CZW0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and n=1 Tax=Vibrio shilonii AK1 RepID=A6CZW0_9VIBR Length = 392 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 40/309 (12%) Query: 201 LGLPDELSRFTPFCLAL-PIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSL 259 L L D+L TP L PI A+ +G + A A S+T D D + S Sbjct: 100 LALADKLQPETPLRHVLVPISAMGKPWG---------LLACANFVSETRFDD--DFIHS- 147 Query: 260 LVQSLTGLLLGAGIQRL---RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 +L G ++ + I R+ +L +S Q+ ARN+ R++ E RR++AR+LHDD Sbjct: 148 --STLLGNIIASSIARVNHYEQLKRSQQEIAARNR----RIIGERERERRNIARDLHDDF 201 Query: 317 GQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVR---RLLGRLRPRQLDDL 373 Q + ++ + G+ + QSGQ+I + + G+ + R +L L P ++ + Sbjct: 202 SQRLASLGIEMGLAASMCD-----AQSGQVIAKCAKGLAEITRDIQQLSRHLHPVVIERV 256 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADAS 432 L AI S ++++ I E R+D + ++ + ++R+ QE L+N+VKHA A Sbjct: 257 GLHTAIESHIKQVASRSDLIA---EIRLDRNIEFDDDTALHIYRIIQESLSNVVKHASAQ 313 Query: 433 AVTLQGWQQDERLMLVIEDDGSG-LPPGSGQQG--FGLTGMRERVTALGGTLHISC---L 486 + + + D+ + LVIEDDG G LP G GL M ER +GGT+ + L Sbjct: 314 NINVTLRKFDQGIELVIEDDGVGFLPLGVDMNAPSLGLQSMVERGEIIGGTVTLDSSPTL 373 Query: 487 HGTRVSVSL 495 G RV + + Sbjct: 374 SGARVKLQI 382 >UniRef50_C0QFU9 Two-component protein, sensory box histidine kinase/response regulatory protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU9_DESAH Length = 798 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 54/347 (15%) Query: 170 LGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDE-LSRFTPFCLALPIIALAWHYGW 228 P +++Q GR + S ++ L PD+ ++ FT +P+I+ Sbjct: 481 FNPGILNQ-----GRRVTVNCKNLSASSFVALTFPDDRINHFT----CIPLIS------- 524 Query: 229 QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA 288 G LI +L S+ R +P + + + + L + L++ + ++L Sbjct: 525 NGKLIGSLN------LSEATRSYPHMVEIDIFEEVAASLAVAIQSVNLQKSEKRYHRDLE 578 Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS------VKQ 342 R L+ ++ E +E+ R ++ ELHD+IGQ +TA +++L + V Sbjct: 579 R---LSAKVFEMQEATCRKISFELHDEIGQALTAANINLAAIKKLILPDPQQRLPGLVND 635 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 + +I +L+ +D L L P L D LE I+ +R + G +++ D Sbjct: 636 TQAIINRLTEQAHD----LSLNLWPPMLRDFGLESTIQWYLRRI-----GEKVNIQLIFD 686 Query: 403 ESALSENQ----RVTLFRVCQEGLNNIVKHADASAVTLQGWQ-QDERLMLVIEDDGSG-- 455 S E TL+R+ QE LNN++KHA A+ V + Q Q+ + ++ED+G G Sbjct: 687 GSDFPERPAQEIETTLYRLVQEALNNVLKHAQATRVDISITQKQNGMIFFMVEDNGQGFD 746 Query: 456 ----LPPGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 L + G+ GMRER+ LGG L I S GT VS +P Sbjct: 747 LETTLSDETMNDRLGILGMRERIAILGGKLDIWSSLDKGTCVSAEIP 793 >UniRef50_B2JK06 Histidine kinase n=22 Tax=Burkholderia RepID=B2JK06_BURP8 Length = 288 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 106/224 (47%), Gaps = 14/224 (6%) Query: 288 ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADNASVKQSGQL 346 AR + LA L T+E+ RR VA+ELHD +G +TA R AG+ L AD + Sbjct: 48 ARVRELASELTRTQEATRRRVAQELHDSLGAEVTAARFALAGVETWLPADAPPQCTAALQ 107 Query: 347 IEQLSL-GVYDAVRRLLGRLRPRQLDD---LTLEQAIRSLMREMELEGRGIVSHLEWRID 402 Q SL V A + + L LD L I + L V + R+ Sbjct: 108 TAQRSLDAVTQAAQEAVAELHAPTLDKGIVCALSHWINTFAARTGLR-MSFVCAADARL- 165 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 + LS + + +FRV QE LNN+ KHA AS ++ + L +V+ DDG G+PP +GQ Sbjct: 166 -TRLSADASLAVFRVAQEALNNVAKHARASGADMRIEATAQHLSIVVSDDGIGIPPHAGQ 224 Query: 463 --QGFGLTGMRERVTALGGTLHISC----LHGTRVSVSLPQRYV 500 + FGL GMR R A G L ++ HG ++ R+ Sbjct: 225 DERQFGLAGMRARCNAFDGELKVAATCDKTHGETRGTTVNARFA 268 >UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter sulfurreducens RepID=Q74GJ3_GEOSL Length = 830 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 112/242 (46%), Gaps = 38/242 (15%) Query: 274 QRLREL---NQSLQKELARNQH-------LAERLLETEESVRRDVARELHDDIGQTITAI 323 QR EL N L E+A + RL E EE +R+ +A ELHD+IG+ +TA+ Sbjct: 587 QRTAELKLRNMELASEIAERRRAEAALRCYTRRLTEMEEDLRKKLAAELHDEIGRDLTAL 646 Query: 324 RTQAGIV-QRLAAD-----NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQ 377 ++ RL A ++ + +LIE +S VR L +LRP LDD L Sbjct: 647 NLNFSVIGNRLVQGPDGCLKARIEDTERLIEDISR----TVRGLTAKLRPPVLDDYGLPA 702 Query: 378 AIR------SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 A+R S +E+ RG S + + + LFR+ QE L N KHA+A Sbjct: 703 ALRWHADLFSRRTGIEVTVRGADSV-------PRMPAEKEIALFRIVQEALTNCSKHANA 755 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-----QGFGLTGMRERVTALGGTLHISCL 486 V + D R+ L + DDG G P S G+GLT MRER +GGT ++ Sbjct: 756 GNVKVSLDHGDGRVRLSVVDDGIGFAPESASPTPAGSGWGLTIMRERAELIGGTFRLNTA 815 Query: 487 HG 488 G Sbjct: 816 PG 817 >UniRef50_A4JE38 PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Burkholderiaceae RepID=A4JE38_BURVG Length = 479 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 130/249 (52%), Gaps = 20/249 (8%) Query: 266 GLLLG-AGIQR-LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAI 323 G LLG A + R + E N+ Q E A LA R+ E ++ ++RELHDD+GQ +TA+ Sbjct: 234 GKLLGFAKVTRDMTERNRLKQLEYA--SELAARIETAREEEKKRISRELHDDLGQQLTAL 291 Query: 324 RTQAGIVQRLAADNAS-VKQSGQLIEQLSLGVYDA---VRRLLGRLRPRQLDDLTLEQAI 379 + G+ + + D+A+ Q+ QL + + + A VRRL LRP LDDL L A+ Sbjct: 292 KM--GLNRLVTQDDATPSAQAAQLADSMRAALDRAILSVRRLSAGLRPAILDDLGLLPAL 349 Query: 380 RSLMREM-ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHA-DASAVTLQ 437 L+ + + G ++ H E R D ++ LFR+ QE L NI +HA + + V + Sbjct: 350 EWLVDDFRQRSGLRVLFHTE-RCD-VRFTDAASTALFRIVQEALTNIARHAWNPTEVRIA 407 Query: 438 GWQQDERLMLVIEDDGSGLP----PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRV 491 + + L IEDDG P P + GL G+R+RV LGGT L G + Sbjct: 408 FRCTESQCDLSIEDDGEPAPSTERPPAAVHSSGLAGIRDRVRRLGGTSVAEPLPSRGFGI 467 Query: 492 SVSLPQRYV 500 S+S+P+R V Sbjct: 468 SLSVPRRSV 476 >UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinase n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z4G8_BURA4 Length = 665 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 17/237 (7%) Query: 276 LRELNQSLQKELARNQ------HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 LR++ + ++ E A Q L+ L E + +ARELHDD+GQ +TA++ Sbjct: 419 LRDVTERVRAETALKQSREELRDLSANLQNVREEEKTRIARELHDDLGQQLTALKMDLSA 478 Query: 330 VQ----RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 V+ + A N V++ + L +VRR+ LRP LDDL L AI L + Sbjct: 479 VELGLAGVVAPNTGVREQLGGMHGLIDSTVASVRRIAADLRPVMLDDLGLVPAIEWLAND 538 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 R V +D +A + TLFR+ QE L N+ +H+DA+ V L ++ Sbjct: 539 FTRRYRITVDRDIAPVD-TAFTGVGATTLFRIVQEALTNVARHSDATNVQLALKLEEGYC 597 Query: 446 MLVIEDDGSGLPPGSGQQ----GFGLTGMRERVTALGGTLHISCLHGT--RVSVSLP 496 +L I D+G G P + + FGL G+RER GT+ + G ++V+LP Sbjct: 598 VLRIADNGHGAPENARNEQDRPSFGLIGIRERAHMFEGTVTVDNRPGAGFTITVALP 654 >UniRef50_Q4ZV38 ATP-binding region, ATPase-like:Histidine kinase n=9 Tax=Pseudomonas RepID=Q4ZV38_PSEU2 Length = 394 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 115/233 (49%), Gaps = 20/233 (8%) Query: 278 ELNQSLQKELARNQHLAE---RLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRL 333 E N+ L + R Q ++E +L +E R+ +A +LHD + QT+ + + G R Sbjct: 160 ENNRLLDALVVREQTMSELVRQLFTAQEDERKRMAYDLHDGLAQTLAGLHQRLQGFAGRC 219 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 + Q I +L+ R+L+ LRP LDD L QA+ L G+ Sbjct: 220 PDLPEPLDADLQAILKLAQHCVGEGRQLISGLRPSVLDDFGLLQAVDKDADR--LREAGV 277 Query: 394 VSHLEWRIDE-SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 H WR + L + + LFR+ QEG+NN++KHA A V L +E + L++ED+ Sbjct: 278 AVH--WRSRSLTRLPSHLEIALFRIAQEGINNVLKHASAGRVELALELSEEHISLLLEDN 335 Query: 453 GSGL---PP--GSGQQGFGLTGMRERVTALGGTLHISCL----HGTRVSVSLP 496 GSG P G G Q GL M+ER + LGG L +C+ HGTR+ +P Sbjct: 336 GSGFITQKPFNGKGVQKLGLVAMQERASLLGGRL--TCVSRPGHGTRLRAIVP 386 >UniRef50_A0LNC5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNC5_SYNFM Length = 561 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 115/230 (50%), Gaps = 12/230 (5%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 +QR +E ++L+ ++ + L+ +LL +E R +A ELHD IGQT+ A++ GI Sbjct: 317 VQR-KEAERNLRVSESQLRVLSSKLLTVQEEERARLAHELHDSIGQTLVAVKF--GIENA 373 Query: 333 LAADN-ASVKQSGQLIEQLSLGVYDAV---RRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 L + QL++ L V +AV R+L LRP LDD AI L E E Sbjct: 374 LKGRTVGGLDAVSQLLDPLVPMVQNAVEEARKLYMGLRPTILDDFGAIAAIGWLCSEFEE 433 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 G++ IDE + ++ LFR QE LNN +H++A+ V L ++ + LV Sbjct: 434 THTGMLVEKTVDIDEEHIPIPVKIVLFRTVQEALNNAARHSEATRVGLFLKKEKSGITLV 493 Query: 449 IEDDGSGLPPG---SGQQGFGL--TGMRERVTALGGTLHISCLHGTRVSV 493 +ED+G G SG QG GL M+ER+ GGT I G ++ Sbjct: 494 LEDNGIGFDSSRYLSGAQGTGLGIVSMKERIELSGGTFSIESQSGAGTAI 543 >UniRef50_B6BTE6 Signal transduction histidine kinase, glucose-6-phosphate specific, putative n=1 Tax=beta proteobacterium KB13 RepID=B6BTE6_9PROT Length = 433 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 15/228 (6%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 +L +L L+K R L ++L+ +E +++++R+LHD+IGQ++ AI+ QA ++ Sbjct: 213 KLNQLTVKLKKNDERIHELNQKLITIQEQEKKEISRDLHDEIGQSLAAIQVQAASIKTSK 272 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE--MELEGRG 392 N LI + + R L+ RL +DDL +E A+ L++ + Sbjct: 273 KPNT----QADLIISTTKDLIQQTRNLIKRLSLGVIDDLGIEDALVDLIKNWSRRTACKN 328 Query: 393 IVSHLEW---RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 I +++ RI ++ L+E T++R+ QE L NI KH+ V + + D + L Sbjct: 329 INVNIDLPNSRIFKTQLNE----TVYRLTQESLTNISKHSQPKEVLISIQRNDNEIHLSF 384 Query: 450 EDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHG-TRVSVSLP 496 ++G L G G+ GM+ERV L G+ S G +V + LP Sbjct: 385 MNNGI-LKRTKKTDGIGMLGMQERVKNLSGSFKQSIHKGFYKVDIGLP 431 >UniRef50_C2ER69 Two-component system histidine kinase n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2ER69_9LACO Length = 433 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 18/232 (7%) Query: 275 RLRELNQSLQ--KELARNQHLAERLLETEESVRRDVARELHDDIGQTIT--AIRTQAGIV 330 R +EL L+ KE L E + + + R +AR++HD IG T+T A+ A IV Sbjct: 207 REQELKNKLEISKEFKSMADLTEHI--SHDKDRERLARDIHDTIGHTLTGFAVGLDAAIV 264 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 NA+ KQ ++ + G+ + +R+ L R+RP LD+ T + A+ L+ E + Sbjct: 265 LVDIDPNAAKKQLTKVSGSVKDGLIN-IRKSLNRIRPGALDNYTFKAALEELLHEFQ--- 320 Query: 391 RGIVSHL----EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 +SHL E+ D L + +F + +E + N +KH A +T+ ++ Sbjct: 321 --TISHLQITLEYNWDAEKLEKTTEDVIFHIIEETITNSLKHGHAKEITVICSMKENYYQ 378 Query: 447 LVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 LVI ++G P + G GLT +++ V+++GG + G V +P+ Sbjct: 379 LVIHNNGRNAP--DFKPGIGLTYLQDLVSSIGGKIKFDGKVGFTTIVLIPKE 428 >UniRef50_C3PKE4 Two-component system histidine kinase n=5 Tax=Corynebacterium RepID=C3PKE4_CORA7 Length = 388 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 129/233 (55%), Gaps = 32/233 (13%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 ++LRE Q+ELA ++H A RL E R ++RE+HD + Q +++I ++ Sbjct: 165 KQLRET----QEELAASEHQAGRLEE-----RERLSREIHDTVAQGLSSI-----VLLSR 210 Query: 334 AADNASVKQSGQ----LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 AA N S +Q LIE+++ RR + L ++++ +R+L+ E++ + Sbjct: 211 AAKNTSTQQDVTEQLALIEKVAQDNLAEARRFVKEL---AAPASSIDKELRTLVDELQAQ 267 Query: 390 GRGI--VSHLEWRIDESA--LSENQRVTLFRVCQEGLNNIVKHADAS-AVTLQGWQQDER 444 +G+ ++ ++ SA +E V L R +EGL N++KHADA AV G +DE Sbjct: 268 AKGLGLRTYFGLKLTGSADVPTEFSHVIL-RAAREGLTNVMKHADADRAVVTLGSFKDE- 325 Query: 445 LMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLP 496 + L + DDG G+ G +GFGLTG+ +RV ++GG++ + S GT ++V +P Sbjct: 326 ITLDVADDGRGI---EGPRGFGLTGLEQRVRSVGGSVQVESSPAGTALAVRIP 375 >UniRef50_B1LT39 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Methylobacterium RepID=B1LT39_METRJ Length = 476 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 82/232 (35%), Positives = 113/232 (48%), Gaps = 31/232 (13%) Query: 275 RLRELNQ----------SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 RLREL + LQ LA RL++ +E RR ++ ELHDD+ Q +TA+ Sbjct: 225 RLRELRRIATVFNALAGHLQLATRERAELARRLIDAQEQERRWLSLELHDDVAQRLTALS 284 Query: 325 TQAGIVQ---RLAADNASVKQSGQLIEQLSLGVYDAVRRL---LGRLRPRQLDDLTLEQA 378 A +Q R AA + S + + +L+ DAVR L L LRP ++DDL L A Sbjct: 285 LLARSIQDGARSAAPSVSTESA-----ELASMASDAVRALRITLASLRPPEIDDLGLRIA 339 Query: 379 IRSLMREMELEGRGIVSHLEWRIDESA--LSENQRVTLFRVCQEGLNNIVKHADAS--AV 434 +RSL+ G + + R D L ++R+ QEGL N V+HA A A+ Sbjct: 340 LRSLIAAQAQRASGRI-QVALRADAQVDRLPSEAAAHVYRIVQEGLTNAVRHAAARNVAI 398 Query: 435 TLQGWQQD--ERLMLVIEDDGSGLPP---GSGQQGFGLTGMRERVTALGGTL 481 L + D + L DDGSG P + G GL GMR+RV ALGG + Sbjct: 399 ALNVVETDGGADVRLDFADDGSGAPAEVLERPRPGLGLLGMRDRVHALGGQI 450 >UniRef50_C0EY06 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY06_9FIRM Length = 458 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 9/229 (3%) Query: 274 QRLRELNQSLQKELARNQHLA-ERLLETEESVRRDVARELHDDIGQTITAIRTQAG---I 329 +R++ LN+ LQK + A E+ L E R +ARE+HD +G +T I + Sbjct: 209 ERIKLLNEQLQKANEQLHEFAQEKELMGETKERNRLAREIHDTLGHILTGISVGIDAVLV 268 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 + +A D A + G + + G+ D VRR + +L+P L+ ++L AI ++ +M Sbjct: 269 LMDIAPDKAKEQLEG-IGDTARRGLQD-VRRSVRKLKPDALERMSLNNAIHQMIEDMSKV 326 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 + + + + ++ + V ++R+ QE N ++H A+ + ++ ++DE LM++I Sbjct: 327 TNTKIYFVSYMEELEFEADEEEV-IYRIIQESTTNAIRHGKATEIWIRISEKDEELMIII 385 Query: 450 EDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 D+G G S ++GFGL +RERV L G ++ + G + +P R Sbjct: 386 SDNGCGCE--SIKEGFGLKHIRERVELLNGKVNYQGMIGFTIIAKIPIR 432 >UniRef50_B9XGC5 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XGC5_9BACT Length = 394 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 31/274 (11%) Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 +A +T ++ D +L L + L + A LRE KE + + E+L ++ E Sbjct: 92 VAIETLKNGATDYVLKLRLARLAPAVTRA----LRE-----SKERSERKRAVEQLRQSHE 142 Query: 303 SVR--------------RDVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLI 347 +R ++R +HD++GQ +T ++ + RL + V + + Sbjct: 143 QLRALSIYLQEIREEERIRISRAVHDELGQALTGLKIDLSWLAHRLPKEMTPVLNKARDM 202 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR-GIVSHLEWRIDESAL 406 VRR+ LRP LD L L AI + EL+ R GI + +D + L Sbjct: 203 SAHIDETIQTVRRISTELRPGILDHLGLVAAIE--WQANELQSRTGIHCKISSSLDHTVL 260 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG--SGQQG 464 E+ FR+ QE L N+V+HA A+ V + +++ RL+L ++D+G G+ S + Sbjct: 261 DEDLNTVFFRIFQETLTNVVRHAHATRVDVNLREENNRLILEVKDNGRGITKEQISNFKS 320 Query: 465 FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 GL GMRER + LGG + I+ + GTRV VS+P Sbjct: 321 IGLLGMRERASLLGGEVVITGVPKKGTRVIVSIP 354 >UniRef50_A1VTB6 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VTB6_POLNA Length = 439 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 13/223 (5%) Query: 283 LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR--LAADNASV 340 L A + LA +L+ +E RR +ARELHD+ GQT+TAI A ++R A + Sbjct: 209 LSDSRAAQRQLARQLIRVQEDERRALARELHDETGQTLTAIGVTAAYLERHAAELAAAQI 268 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 + Q + + + +R +L RLRP L L A+R L+ + I ++R Sbjct: 269 AECAQDVRRDVRTSREQLRAMLKRLRPHGLQGPGLASALRELLAGWQQRAGAI----DFR 324 Query: 401 IDESA-----LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 +D A L E+ + L+RV QE L N+V+H+ A+ ++ L L IEDDG G Sbjct: 325 LDMPAGGLPPLGEDAGLVLYRVVQEALTNVVRHSGAAHCRVKIEAHAAMLTLHIEDDGCG 384 Query: 456 LPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 LPP +G GL G+ ER+ +GG L + G R+ ++LP Sbjct: 385 LPPDGAARGGGLLGIAERLDMVGGRLALEPAQPTGLRLQITLP 427 >UniRef50_A9B913 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B913_HERA2 Length = 695 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 14/216 (6%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIR--TQAGIVQRLAADNASVKQ-SGQLI 347 Q L +L+ T+E+ R +ARELHD +GQ +T ++ ++ +Q + + + +GQ+I Sbjct: 473 QRLTHQLVTTQETERAALARELHDGVGQALTGLKLYLESTPLQPITVWRDRIHEATGQVI 532 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 + LS VR+L +RP L+DL L +++ L++ +E + G+V L L Sbjct: 533 DILS-----QVRQLSLDIRPAALEDLGLMVSLQWLLQRVE-QQTGVVIALHPYTPIPPLP 586 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ---G 464 + L+RV QE +NN+V++A+ + + + L+I+D G G Q G Sbjct: 587 HAIELALYRVIQEAVNNLVRYANVATAAIYFGVTTTGVSLLIQDHGRGFDVAQVCQMPRG 646 Query: 465 FGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 GL GMRER+ LGGTL I HGT ++V +P R Sbjct: 647 IGLVGMRERIRMLGGTLTIESALGHGTSLTVDVPCR 682 >UniRef50_Q72LA1 Probable two-component sensor n=1 Tax=Thermus thermophilus HB27 RepID=Q72LA1_THET2 Length = 321 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 13/187 (6%) Query: 312 LHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLD 371 LHD +G +TA + +R + ++ E L + VRRL LR LD Sbjct: 145 LHDGVGSLLTAALLTLKVAERRPEKLPEAR--ARVAEAL-----EEVRRLSQELRMPLLD 197 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 DL L++A+R + G +E R+ L + + V LFRV QE L N+++HA A Sbjct: 198 DLGLDEALRRYLEGYRRHG----LEVEARLQVPPLPKEKEVALFRVVQEALTNVLRHARA 253 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGT 489 V ++ W + +RL ++EDDG G P S GL GM+ER+ LGG+L + GT Sbjct: 254 GRVKVELWPEGDRLFGLVEDDGVGFDPESTPPSVGLLGMQERIQGLGGSLVLRSAPGQGT 313 Query: 490 RVSVSLP 496 RV +P Sbjct: 314 RVEFGVP 320 >UniRef50_D1ABJ2 Histidine kinase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ABJ2_THECD Length = 373 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 22/285 (7%) Query: 225 HYGWQGALIATLMNAIALIA------SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRE 278 H +GA + L + A IA + R +DL+ +L L + R Sbjct: 88 HADGRGAALPVLADRRATIAVIDVRSAGPCRQEDLDLVTALAA------LFAPVLHSCRR 141 Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 L + ++E + + AER +E +E+ R + R++HD I Q + ++ ++ A A Sbjct: 142 LRNAQEREHS-AERFAERAVEVQEAERARLVRDIHDGIAQRLASLGFHLSACEQALAQGA 200 Query: 339 SVKQSGQL--IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 + + QL +L R +G LRP LDDL L A+ +L RE + Sbjct: 201 TAEAQAQLGLARELCDLAAAETRAAIGGLRPPVLDDLGLTAALATLAREAGSRQPSLDVT 260 Query: 397 LEWRID-ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 + + E AL ++ + L+R+ QE + N ++HA AS V + D+R+ L + DDG G Sbjct: 261 VTVSGELEDALPDHIQTALYRIAQEAVGNCLRHAKASVVHVLLEHDDDRVRLRVSDDGVG 320 Query: 456 LP------PGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVS 494 G +GL GM ER LGG +HIS G +V Sbjct: 321 FSIQDVFAAGRRPDSYGLRGMSERAELLGGRVHISSRPGGGTTVE 365 >UniRef50_C9RTT5 PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Geobacillus RepID=C9RTT5_GEOSY Length = 339 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 138/262 (52%), Gaps = 24/262 (9%) Query: 247 TWRDHPVDLLLSLLVQSLTGLLL---GAGIQRLRELNQSLQKELARNQH---LAERLLET 300 T+ H +D+ +S T L+L GA L +Q+++K+ H + ++L E Sbjct: 78 TYHGHLIDVEMS------TALILEQDGAKYYLLVLRDQTVKKKEEEVLHSKWMVKKLTEA 131 Query: 301 EESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAAD--NASVKQSGQLIEQLSLG-VYD 356 +E + +A+ELHD +GQ++ +I I+QR+ + +A VK+ + LG V + Sbjct: 132 KEEEHKRLAQELHDGVGQSLYSISIALDNIIQRIQDEKLHAYVKEVRE-----ELGRVME 186 Query: 357 AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFR 416 V+ +LRP+ LD L L I+SL+ + + + L+ + + LS + L+R Sbjct: 187 DVKLYAQQLRPKSLDALGLIPTIQSLIHSFQSKMPNMSFSLQTNV-YTRLSPTVEINLYR 245 Query: 417 VCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTA 476 V QE L+N++KHA A+ V + + + L + I+D+G G ++G GL ++ER++ Sbjct: 246 VIQEALHNVMKHAKATEVCITIERVGQELHVSIKDNGVGFEVEEKREGLGLKHIQERISH 305 Query: 477 LGGTLHISC--LHGTRVSVSLP 496 LGG I+ + GT + V +P Sbjct: 306 LGGETIITSAPMKGTTIFVCVP 327 >UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobacter formigenes RepID=C3XBQ9_OXAFO Length = 225 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 51/242 (21%) Query: 283 LQKELARNQHLAERLLETEESVRRD----VARELHDDIGQTITAIRTQAGIVQRLAADNA 338 LQ + + L E L++ +E +R D +ARE+HD++GQ + A+R + ++++ D Sbjct: 3 LQSTVVDEEELRE-LIDHQERIREDERKRIAREIHDELGQRLLALRIEVTLLKQETFD-- 59 Query: 339 SVKQSGQLIEQLSLGVYDA----VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 S ++ + I+++ LG D+ VR L+ LRP LD G+V Sbjct: 60 SREKRSERIDEV-LGQLDSTVKSVRNLINNLRPAVLD-------------------LGLV 99 Query: 395 SHLEWRI----------------DESALSENQRVT-LFRVCQEGLNNIVKHADASAVTLQ 437 + L+W+ DE+ +++R T LFRV QE L NIVKHA AS V+++ Sbjct: 100 ASLDWQAKDFTRRNGIECVFETHDENLEVDDERATVLFRVLQEALTNIVKHAKASKVSVK 159 Query: 438 GWQQDERLMLVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHISCLH-GTRVSVS 494 D+ L+L I D+G G+P + + +GL G+RER+ L G I+ GT ++ Sbjct: 160 LDGNDDTLVLKISDNGIGMPKVRNRKIKSYGLAGIRERIGMLNGEFRIATGDTGTTLTFR 219 Query: 495 LP 496 +P Sbjct: 220 IP 221 >UniRef50_C1A9U6 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U6_GEMAT Length = 676 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 15/243 (6%) Query: 267 LLLGAGIQRLRELNQ-SLQKELARN----QHLAERLLETEESVRRDVARELHDDIGQTIT 321 LL G Q L+Q +L ++LA + L+ R+L E RR ++RELHD+ Q + Sbjct: 432 FLLALGQQVGAALDQWALDRQLAARTQALEQLSARMLRQHEEERRRLSRELHDETAQVFS 491 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 A++ Q ++ L A ++S + +L+ + G+ ++R++ LRP LDDL L A+ S Sbjct: 492 AVKMQLESLRPLLAADSSPRLD-RLLSLVDTGIA-SIRQVTSALRPTLLDDLGLRPALHS 549 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 L+ + E G++ L + +FR QE L+NIV+HA+A V + Sbjct: 550 LVTDFT-ERSGLLVVFGAPPTLPPLPGEADLAVFRALQEALSNIVRHAEAERVDVTVSVD 608 Query: 442 DERLMLVIEDDGSGLPP------GSGQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVS 494 D+ L LV+ DDG G P S + G+TGMRER+ A+GG++ I +C G +S+ Sbjct: 609 DDALTLVVRDDGRGFPTLRNGRLRSTEHRMGITGMRERLLAVGGSVTIVNCTPGAELSIY 668 Query: 495 LPQ 497 +P+ Sbjct: 669 VPR 671 >UniRef50_C8XB57 Histidine kinase n=2 Tax=Actinomycetales RepID=C8XB57_NAKMY Length = 368 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 12/228 (5%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 I R E+ L+ E + A L +E R+ +ARELHD+IGQ++TA+ G+ + Sbjct: 113 IGRFNEMLDRLEHERGVSSAHA---LAAQEGERQRIARELHDEIGQSLTAV--LLGLKRT 167 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 A +++ +++ D VR + RLRP L+DL L A+ +L + R Sbjct: 168 ADQAPAPLREELHDVQETIRACLDEVRTVARRLRPGVLEDLGLRSAMAALASDFTAASRV 227 Query: 393 IVS-HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 V ++ R+ AL + + ++R+ QE L N+ +HADA V L + + L I D Sbjct: 228 PVDMAVDPRL--PALGADAELVIYRIAQEALTNVARHADADRVDLTLIAHPDGVELTIID 285 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 DG G P + +G G+ GMRER + TL I G+R+ + LP+ Sbjct: 286 DGRGFDPAT--EGAGIRGMRERAILVAATLTIGPDPGGGSRLRLFLPR 331 >UniRef50_Q2IIQ9 Periplasmic sensor signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=Q2IIQ9_ANADE Length = 594 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 14/197 (7%) Query: 311 ELHDDIGQTITAIRTQAGIVQRLAADN----ASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 +LHD++GQ IT+++ +QR AD A + +L ++L V VRR+ LR Sbjct: 389 DLHDELGQVITSVKVDLAALQRAGADGEDPGARRARFAELAQRLDEAVA-FVRRVSSDLR 447 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSEN--QRVTLFRVCQEGLNN 424 P LD L L A+ L+R++E R + L+ +D S VTLFR+ +E L N Sbjct: 448 PPVLDRLGLAAALEGLVRDLEQRTR-LAVFLD--VDPSVEPVEWLPAVTLFRIVREALTN 504 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLH 482 +V+HA A+ V ++ L+L + DDG G+ P ++ G+ GM+ER + GT Sbjct: 505 VVRHAGATEVAIELRATPAALVLTVRDDGKGIGPWAADDRRSLGIHGMQERALLVDGTFE 564 Query: 483 ISCL--HGTRVSVSLPQ 497 I+ GT + V++P+ Sbjct: 565 IAGTPGGGTTIVVTIPR 581 >UniRef50_D2BDI0 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BDI0_STRRD Length = 653 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 6/209 (2%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQL 350 Q ERL+ E RR + R+LHD +G + I + +++ +A A ++ + + QL Sbjct: 447 QSSRERLVIAREEERRRLRRDLHDGLGPGLATICVRLDLIRAMA--PAGLRDQLREVRQL 504 Query: 351 SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE-GRGIVSHLEWRIDESALSEN 409 + G+ +RR + LRP LD+L L+ A+ L+ ++ + G G + + AL Sbjct: 505 TDGLVGDIRRTVHDLRPPALDELGLDGALEDLVLDIAPDPGGGPAVAVRAPLPFPALPAA 564 Query: 410 QRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTG 469 V +R+ QE L N ++HADAS V + + ERL L I DDG GL P +G G Sbjct: 565 VEVAAYRISQEALANALRHADASNVEITVRAEPERLFLEIRDDGRGL-PDPVVEGVGSGS 623 Query: 470 MRERVTALGGTLHISCLH--GTRVSVSLP 496 MRER LGG L + GT V LP Sbjct: 624 MRERAAELGGLLRRTSSQGKGTIVEAVLP 652 >UniRef50_Q5NZZ4 Two-component system sensor kinase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZZ4_AZOSE Length = 341 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 118/231 (51%), Gaps = 10/231 (4%) Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITA 322 +L G+++ +R+R +Q L + R + LA L + E +R +ARE+HD +G +++ Sbjct: 92 ALAGVVIDVS-ERVRR-DQDLHRSRRRLRELASYLNSSREELRSQLAREVHDVLGGMLSS 149 Query: 323 IRTQAGIVQRLAADNA--SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 I+ +QR ++ A +++ Q + L D R++ LRPR LD L L AIR Sbjct: 150 IKLDVFRIQRRSSGPALAEIQEITQELLPLVQDTIDTARQISDELRPRMLDTLGLVAAIR 209 Query: 381 SLMREMELEGR--GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 S E+E GR I+ E LS FRV QE L N+ +HA A V ++ Sbjct: 210 S---ELEAFGRRNEILVGFMMEGAEPELSAETATQCFRVFQEALTNVGRHAQAETVEVRV 266 Query: 439 WQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCLHG 488 +D R + + DDG G+ S ++G G+ M ER ++GG+L++ G Sbjct: 267 RNRDGRFEMQVRDDGKGIDRPSMREGSIGMLSMAERARSIGGSLYVHARAG 317 >UniRef50_Q24Z69 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Z69_DESHY Length = 269 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 297 LLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYD 356 L++ +E + ++RELHD +GQ +T++ + +Q Q +L L+ + Sbjct: 62 LIQLQELENKRISRELHDSVGQALTSLLLRIRAIQNKEEATEVFDQLEELY-HLTTETME 120 Query: 357 AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFR 416 VRR+ LRP L++L L AI + + + GI + L + +T++R Sbjct: 121 EVRRISLNLRPLALENLGLVDAIYWYVENFQ-KNTGIEVVFRSSASKRTLPKEIELTIYR 179 Query: 417 VCQEGLNNIVKHADAS--AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERV 474 + QE L N+ KHA A A+T+ G ER+++ I DDG G+ +G GL GM ERV Sbjct: 180 IVQEALTNVSKHAQAQHVAITIGG---SERVLMSIRDDGKGIDRAKKTEGLGLLGMSERV 236 Query: 475 TALGGTLHISC--LHGTRVSVSLP 496 LGGTL I GT + V +P Sbjct: 237 RLLGGTLSIQGGEAEGTSILVEIP 260 >UniRef50_C1ZGL0 Signal transduction histidine kinase, COG4585 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGL0_PLALI Length = 394 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 20/228 (8%) Query: 280 NQSLQKELARNQ--HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ----RL 333 N+ +KE A+ L +L++ +E RR ++RELHD GQ +TA+R +++ Sbjct: 152 NEMREKESAQQAVVGLLRKLVQAQEEERRRISRELHDQCGQDLTALRLALKLIEDSLPNE 211 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS-LMREMELEGRG 392 A + + +LI+++S + L LRP +LDD L AIRS L+ E+ G Sbjct: 212 PGQTAYFRTASELIDRIS----SEIHTLALNLRPPELDDHGLVSAIRSHLLTWCEISG-- 265 Query: 393 IVSHLEWRID-ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 + + E RI E + E + L+R QE L N+ +HA AS V++ D+RL L+IED Sbjct: 266 LRADFESRISPEVVIPEEVEIALYRTFQESLTNVARHAQASHVSVLLMAHDQRLDLIIED 325 Query: 452 DGSGLPPGSGQ------QGFGLTGMRERVTALGGTLHISCLHGTRVSV 493 DG G Q GL GM+ER+ A+GG+L I G +V Sbjct: 326 DGVGFEVHRQQIVEVRPSRLGLLGMQERLLAVGGSLEIESSPGNGTTV 373 >UniRef50_D2PW73 Histidine kinase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PW73_9ACTO Length = 430 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 120/256 (46%), Gaps = 21/256 (8%) Query: 255 LLLSLLVQSLTGL----LLGAGIQRLRELNQ--SLQKELARNQHLAERLLETEESVRRDV 308 +L+SL V SL G ++ QR + Q + + ELA H A + E R + Sbjct: 176 MLISLAVSSLMGTWIDRVISQSEQRAELIEQLEAARDELAEAHHTAGVMAE-----RERM 230 Query: 309 ARELHDDIGQTITAI----RTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGR 364 ARE+HD + Q +T+I +T A +QR +A+ + + IE + R L+ Sbjct: 231 AREIHDTLAQGMTSIVMLAQTAAVELQRGGTASAATRLAA--IEDTARENLAEARALVAA 288 Query: 365 LRPRQLDDLTLEQAIRSLMREMELE-GRGIVSHLEWRIDE-SALSENQRVTLFRVCQEGL 422 P L + L +R E G + L+ +E +AL + Q+V L R QE L Sbjct: 289 FTPVALAEAPLADVLRRQAERFAAETGVDVQVALDMPDEEVAALPQGQQVVLLRAAQEAL 348 Query: 423 NNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLH 482 N+ KHA A++V + + + + I DDGSG + G+GL MR RV GGT+ Sbjct: 349 ANVRKHAGATSVLITLTMAPDGVRIEISDDGSGFVTAAPVTGYGLAAMRGRVEESGGTVQ 408 Query: 483 ISCL--HGTRVSVSLP 496 + GTRV V +P Sbjct: 409 VDSAPGRGTRVQVLIP 424 >UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus RepID=LIAS_BACSU Length = 360 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 118/221 (53%), Gaps = 11/221 (4%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR--TQAGIVQRLAADNA 338 Q L E A Q ++ + +EE R+ +AR+LHD + Q + AI T A + AD+ Sbjct: 129 QKLSNERAEWQAQMKKSVISEE--RQRLARDLHDAVSQQLFAISMMTSAVLEHVKDADDK 186 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 +VK+ +++E ++ + +R LL LRP L+ L++ + L+ E + +E Sbjct: 187 TVKRI-RMVEHMAGEAQNEMRALLLHLRPVTLEGKGLKEGLTELLDEFR---KKQPIDIE 242 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 W I ++A+S+ LFR+ QE L+N+ +H+ AS VT+ ++ +L L + D+G G Sbjct: 243 WDIQDTAISKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKNSQLRLKVIDNGKGFKM 302 Query: 459 GSGQ-QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + +GL M+ER + +GG + + GT++ V +P Sbjct: 303 DQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVP 343 >UniRef50_D2BD99 Signal transduction histidine kinase-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BD99_STRRD Length = 430 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 20/275 (7%) Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRE 278 + ++A G + L A + + + + S T RD DL+++ ++ S+T L G + R R Sbjct: 143 VYSVAVRCGRETTLGAWIASMLCMALSTTSRD---DLVIAAVLLSVTALF-GYNV-RARR 197 Query: 279 LNQSLQKELARNQHLAERLLETEESV--RRDVARELHDDIGQTITAIRTQAGIVQRLAAD 336 L K LA + +ER L + ++ R +ARELHD + ++ I QA V AA Sbjct: 198 LAA---KRLAEEEQRSERALAAQATLEERARIARELHDVVAHHMSVIAIQAEAVPLQAAG 254 Query: 337 NASVKQSG-QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR--GI 393 +A + G + I LSL +RR++G LR T Q + E+ R G+ Sbjct: 255 DAGRLEEGLREIRALSLAAMTEMRRVVGVLRDGDGRADTAPQPGLGRLEELVGTARSAGL 314 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 L+ D L ++ +R+ QE L+N ++HA SAV+++ + L + +E+D Sbjct: 315 TVTLKLGGDLMGLPAAVSLSAYRIAQESLSNAMRHAPGSAVSMRISRSGAELHIHVENDA 374 Query: 454 SGLPPGS-------GQQGFGLTGMRERVTALGGTL 481 P + G G GL GMRERV+ LGG L Sbjct: 375 RRRSPAAPEHAGEPGHTGHGLIGMRERVSMLGGKL 409 >UniRef50_C7GCL6 Sensor protein DegS n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GCL6_9FIRM Length = 334 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 23/217 (10%) Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGV 354 +LLET+E+ R+ ++RELHD Q +T++ + + +L D K ++ + + Sbjct: 122 KLLETQENERQRISRELHDSTVQNLTSLVHKTELCSKLIDMDKVRCKLELNIMSKTLRDI 181 Query: 355 YDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV-- 412 + R ++ LRP DD+ LE I + ++E S +I+ S + E+ ++ Sbjct: 182 INDTRNMIYNLRPMSFDDIGLEVTIERALEKLE-------SSETKKINFSVVGESYKINP 234 Query: 413 ----TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-------PPGSG 461 TL R+ QE +N ++HAD S + + Q ++L IEDDG G + Sbjct: 235 VIGITLLRIIQEACSNAIRHADCSIIKVVLNYQPGTIILSIEDDGKGFVYEETECSCKAD 294 Query: 462 QQGFGLTGMRERVTALGGT--LHISCLHGTRVSVSLP 496 GFGL+ M+ERV L G +H GT++ V +P Sbjct: 295 NSGFGLSMMKERVYLLSGKIDIHSKINVGTKIQVEVP 331 >UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax=Chloroflexus RepID=A9WAP8_CHLAA Length = 491 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 15/224 (6%) Query: 284 QKELARNQHL----AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS 339 ++E A +HL +++ +E R+ +ARELHD Q +T++ + R AD Sbjct: 257 ERERAEREHLRAQYVTQIITAQEEERKRIARELHDSTSQALTSLL----VGLRSLADRHR 312 Query: 340 VKQSGQLIEQLS--LG-VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 + Q ++ L +G + + + L +LRP LDDL L A++ + E I+ Sbjct: 313 SPEIAQQVDDLRSIVGQILNDLHALARQLRPSVLDDLGLAAALQRYVAECRARSGLIIDL 372 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 +D+ L L+R+ QEGL NI++HA AS ++ ++ +R+ +IEDDG G Sbjct: 373 ALPGLDDFRLDPVVETALYRIVQEGLTNIIRHAHASTASVVIERRADRVRAIIEDDGCGF 432 Query: 457 PPGS--GQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 P + G GL G+RER L G L I S GT + V +P Sbjct: 433 DPNALHGDGHLGLNGIRERAALLNGQLIIESSPGSGTTLYVEIP 476 >UniRef50_B2A8K7 Histidine kinase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8K7_NATTJ Length = 396 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 13/164 (7%) Query: 344 GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 G+L +Q+ + D VR+++ LRP LDDL L AIR L++ +E E I L+ +E Sbjct: 231 GELKQQVRTNLKD-VRKIIFDLRPMTLDDLGLVPAIRKLIQGVEEES-NIEGELKTFGEE 288 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP----- 458 L+ + LFR QE LNNI KH+ A ++ ++ + ++I DDG G P Sbjct: 289 KRLNRYIEIALFRTVQEALNNIKKHSGAKRFWVKTDFSNDTIHIIIRDDGKGFNPEDKLQ 348 Query: 459 ----GSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 S + FG++ M+ERV +LGG ++ S GT++S+ +P Sbjct: 349 DSEDDSDSEHFGISNMKERVESLGGEINFSSKPKQGTKISIKVP 392 >UniRef50_A8H3C0 Histidine kinase n=2 Tax=Shewanella RepID=A8H3C0_SHEPA Length = 397 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 121/231 (52%), Gaps = 15/231 (6%) Query: 263 SLTGLLLGAGIQRLR---ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQT 319 ++ G ++ + I+RLR EL+ +K +A N+ RL+E E + +AR+LHDD GQ Sbjct: 157 TILGNIMASSIERLRHYQELSHQKEKVVALNK----RLIEDREKQLKVIARDLHDDFGQR 212 Query: 320 ITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + ++ + G + DN S K + +LS D ++ L L P +D + L AI Sbjct: 213 LASLNLELGFI-NTQLDNESQKALYDVAAKLSDITRD-LQHLSRHLHPAIIDKVGLYAAI 270 Query: 380 RSLMREMELEGRGIVS-HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 + ++M L ++S +L I SE Q++ ++R+ QE L N+++H+ A+A+++ Sbjct: 271 EAEAKKMTLHKNILLSLNLSKEI---LYSEGQKLHIYRISQEALANVMRHSHATALSICL 327 Query: 439 WQQDERLMLVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCLH 487 ++ + L IED+G G+ + G+ M ER +GGT+ + H Sbjct: 328 NREGKFAKLTIEDNGKGMAQDALANSSSLGIESMLERAALIGGTIDFTVGH 378 >UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI0_KANKD Length = 247 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 16/223 (7%) Query: 276 LRELNQSLQKE----LARNQH---LAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + EL+Q QK L+ NQ LA+R+ +E R+ +ARELHD +GQ +TA+ Q Sbjct: 11 VNELSQKQQKIAQELLSGNQQMRTLAKRVWRVQEDERKHIARELHDGVGQLLTALINQLQ 70 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM-E 387 + + + + + + +L + RL +RPR LDDL L A++ L R M E Sbjct: 71 QMHKEGEPDPKELEEALTLARQALSDTREISRL---MRPRILDDLGLIPALQWLSRVMGE 127 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 I H + ++ L + + +FRV QE + N +KHADA+ + + + L+L Sbjct: 128 KNSIKIDLHEQLSVN---LDDETQTLVFRVVQEAITNAIKHADATHIDITVIATERMLVL 184 Query: 448 VIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHISCLHG 488 I D+G G+ + + +GFGL+ MR+RV A GG L + G Sbjct: 185 KIRDNGVGMTKETSESVEGFGLSAMRDRVAAFGGQLMVESQPG 227 >UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FQK5_DEHSB Length = 1229 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 11/210 (5%) Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS--VKQSGQLIEQL 350 L++RL+E +E R +ARELHD +GQ++T ++ + D + + ++ L+ +L Sbjct: 1012 LSQRLVELQEEERATIARELHDQVGQSLTVLKLMLDKAKDSLPDRSEKLLAEAQPLVSEL 1071 Query: 351 SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQ 410 +VR + LRPR LDDL L A+ + GI + + + S Sbjct: 1072 ----ISSVRNMSLDLRPRMLDDLGLLPALLWYFDRFSSQ-TGINVNFQHAGLKRKFSPQL 1126 Query: 411 RVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGF--GLT 468 ++R+ QE L N+V++A V ++ +L LVI+D G G P G GL Sbjct: 1127 GTAVYRIIQEALTNVVRYAGVDHVLVRARADKNQLALVIQDSGKGFNPAQRATGMSSGLK 1186 Query: 469 GMRERVTALGGTLHISCL--HGTRVSVSLP 496 GM+ERV LGG L I GT + V LP Sbjct: 1187 GMKERVRFLGGKLDIESKPGEGTHIIVELP 1216 >UniRef50_C8WYI2 Histidine kinase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYI2_ALIAD Length = 223 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 109/202 (53%), Gaps = 18/202 (8%) Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 R+LE E RR +AR+LHD Q +T I + +++ + N + + ++QL V Sbjct: 17 RMLEEE---RRRIARDLHDGPVQALTNISMKLEVLKHMLDSNPQIAKDQ--VDQLHRRVT 71 Query: 356 DAV---RRLLGRLRPRQLDDLTLEQAIRSLMREMELE-GRGIVSHLEWRIDESALSENQR 411 +AV R L+ LRP +D++ L +A ++L + E G ++ + + ++ ++ Sbjct: 72 EAVKEIRALIYDLRPLAVDEVGLIEATKALCSQFEKNWGISTSFVVQDGVTSAEITPAKQ 131 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG-----LPPGSGQQGFG 466 V L+R+ QE LNNI KHA A+ ++ + + L++ ++DDG G +PPG +G Sbjct: 132 VALYRLIQEILNNIKKHARATTTVVEFLRDESDLIITVKDDGVGFDTNYVPPGH----YG 187 Query: 467 LTGMRERVTALGGTLHISCLHG 488 L GM+ER LGG L I + G Sbjct: 188 LIGMKERAEFLGGRLEIHSIIG 209 >UniRef50_C1DEQ8 Periplasmic sensory histidine protein kinase, two-component n=3 Tax=Proteobacteria RepID=C1DEQ8_AZOVD Length = 458 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 107/214 (50%), Gaps = 12/214 (5%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV--QRLAADNASVKQSGQLIE 348 Q L R++ +E R V+RELHD I Q + +I+ Q + Q A + + GQ E Sbjct: 236 QSLNRRIVHLQEEERSRVSRELHDGISQLLVSIKFQFELAGHQLEAGHSGGLAILGQATE 295 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR--IDESAL 406 +L G +RR+ LRP LD L L AI L E E R +S + +R + ++ L Sbjct: 296 RLG-GAIGEIRRISHDLRPSLLDTLGLPAAIGQLA--TEFEQRCALS-VVYRNSLHDARL 351 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS---GQQ 463 + V LFR+ QE L NI +HA A +V + + L + DDG G P + Q+ Sbjct: 352 PDEVAVALFRIVQEALTNIERHARAGSVLIDLEPCVSGVQLRVRDDGIGFDPRTIERAQE 411 Query: 464 GFGLTGMRERVTALGGTLHISCLHG-TRVSVSLP 496 G GL +RER+ LGG +S G T + V LP Sbjct: 412 GIGLRNIRERIEHLGGRFSLSSSTGHTGICVILP 445 >UniRef50_P55183 Sensor histidine kinase yxjM n=1 Tax=Bacillus subtilis RepID=YXJM_BACSU Length = 406 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 30/237 (12%) Query: 275 RLRELNQSLQK---ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 +L ++ LQK EL L+ R EE R +AR++HD IG +T++ Q +Q Sbjct: 172 QLEHAHKELQKAHAELQEASVLSLRYAVLEERTR--IARDIHDSIGHELTSVIVQ---LQ 226 Query: 332 RLAADNASVKQSGQLIEQLSLGVY----DAVRRLLGRL-RPRQLDDLTLEQAIRSLMREM 386 L S K+ + + Q L V VR ++ ++ R + LT A+R L+ ++ Sbjct: 227 SLPYILKSSKEDSEKVIQNVLSVARECLQEVRSVVHQMGRSESMVGLT---ALRGLIHQV 283 Query: 387 ELEGRGIVSHLEWRIDESALSE-----NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 E E G L +D + LSE N T++R+ QE L NI++HADAS Sbjct: 284 E-ERSG----LHVSLDTAGLSEESWPPNVSETIYRILQEALTNIIRHADASHAAAVISND 338 Query: 442 DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 L + I DDG GS GFGLTGM+ER GG+L S + G ++ +SLP Sbjct: 339 KSHLYVTITDDGQF--TGSLTYGFGLTGMKERAEKAGGSLTFSAVQPSGLKIELSLP 393 >UniRef50_Q0KDJ4 Signal transduction histidine kinase containing PAS/PAC sensor domain n=3 Tax=Burkholderiales RepID=Q0KDJ4_RALEH Length = 355 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 15/253 (5%) Query: 257 LSLLVQSLTGLLLGA-GIQR----LRELNQSLQKELARNQHLAERLLETEESVRRDVARE 311 + + ++ G ++G GI R + Q L + A+ + L+ L E+ R ++RE Sbjct: 96 IKMPIRGQDGAVVGTVGISRDITDRKRSEQELLESRAQLRELSAYLQSVREAERTRISRE 155 Query: 312 LHDDIGQTITAIRTQAGIVQRLAADNA--SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQ 369 LHD++GQ++TA+R ++ +A + ++ Q+++Q++ DAV+R+ LRP Sbjct: 156 LHDELGQSLTALRLGLSFIEAQQGPDAGDACRKHLQMLKQIADSTVDAVQRIAADLRPPL 215 Query: 370 LDDLTLEQAIRSLMREMELEGRGIVSHLEWR-IDESALSENQRVTLFRVCQEGLNNIVKH 428 LD+L L AI L G GI L + + E LS +FR+ QE L N +H Sbjct: 216 LDELGLTAAIEWLAESFSERG-GIACELALQPVGE--LSAELSTAVFRIAQEALTNACRH 272 Query: 429 ADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG--QQGFGLTGMRERVTALGGTLHISCL 486 A V ++ L LV+ D+G G+ ++ GL GMRER LGG L ++ Sbjct: 273 GRADRVRVELSAAGGTLRLVVADNGRGIDASRAGHRRSLGLLGMRERALMLGGKLAVTSE 332 Query: 487 H--GTRVSVSLPQ 497 GTRV +P Sbjct: 333 KGGGTRVEAQIPN 345 >UniRef50_A6EM20 Sensor histidine kinase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EM20_9BACT Length = 1003 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 23/228 (10%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 +L + Q+LQ++ AR+ L+ ++E R+ +A++LHD +GQ +T I+ + Sbjct: 795 KLSKQRQTLQQKFARD------LITSQEKERKRIAKDLHDSVGQRLTLIKRK-------- 840 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 + KQ+ + + +++ V + VR + L P L L L ++I+ L +++ E + Sbjct: 841 ----TQKQNEKELTEMTNDVLEEVREISRGLYPANLKLLGLTESIKQLAYDID-EQTDLF 895 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 +E ++ +E + ++R QE NNI+KHA+A V L +R+ + IED+G Sbjct: 896 ITIELANIDTYFNEEDTLNIYRFVQESFNNIIKHANAKEVYLTTHIFTDRITINIEDNGI 955 Query: 455 G--LPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 G L + GL + ER++ + G L I GT++ ++P + Sbjct: 956 GFSLTEKKVKSTLGLKTLEERISVVKGQLQIISKPSVGTQIIATIPTK 1003 >UniRef50_UPI0001C314AD GAF sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AD Length = 386 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 102/202 (50%), Gaps = 18/202 (8%) Query: 302 ESVRRDVARELHDDIGQTI--------TAIRTQAGIVQRLAADNASVKQSGQLIEQLSLG 353 E RR ARELHD+ Q + +A+R + Q A A+V++ G IE+L Sbjct: 182 EQERRRWARELHDETLQGLGGLQVLLSSALRRSSEPSQVEGAVRAAVEEIGTEIEKL--- 238 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLM-REMELEGRGIVSHLEWRIDESA-LSENQR 411 R L+ LRP LD+L LE A+ SL R +EG + S + E L + Sbjct: 239 -----RTLITELRPAALDELGLEPALESLAGRVAAVEGIVVTSEVVLADGERRRLPPDLE 293 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMR 471 ++R+ QE L N VKHA A V ++ ++D + L + DDG+G G+ + GFGL GM Sbjct: 294 TAVYRLVQEALTNAVKHARAERVDVRVTERDGCVELTVRDDGAGFDVGAPRAGFGLLGME 353 Query: 472 ERVTALGGTLHISCLHGTRVSV 493 ERV GGTL + G ++ Sbjct: 354 ERVALAGGTLAVQSRPGAGTTI 375 >UniRef50_A5FMH3 Histidine kinase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FMH3_FLAJ1 Length = 670 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 33/234 (14%) Query: 282 SLQKELARNQHLA-----------ERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 S+QKE+ Q L+ + L++ EE R+ +AR+LHD +G ++ ++ + Sbjct: 440 SIQKEINLKQELSSFEDRHKLSVSKALIQGEEMERKRIARDLHDGLGSMLSGVKIHLNLA 499 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLG---RLRPRQLDDLTLEQAIRSLMREME 387 + K +G+ + + + ++++ L L P L +L+LE A+R L Sbjct: 500 K---------KDNGEAVNNVDTLLDNSIKELRNISQNLMPESLLELSLEHALRDLC---- 546 Query: 388 LEGRGIVSHLEWR--IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 V+ +E++ I +S L +N + ++R+ QE LNN +K+A AS V + Q + Sbjct: 547 AANSNAVTKIEFQYLIKKSKLPKNYEIMIYRIIQELLNNALKYAKASQVLVSCSQNKDVF 606 Query: 446 MLVIEDDGSG--LPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSL 495 + +EDDG G L + G GL + RV L G L I GT V + L Sbjct: 607 FITVEDDGVGFNLSEAKSKNGMGLKNIHNRVEFLSGKLEIDSKINQGTSVYIEL 660 >UniRef50_A3WDJ8 Sensor histidine kinase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDJ8_9SPHN Length = 367 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 30/246 (12%) Query: 268 LLGAGIQRLR------ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 L+GA I R+ EL +L++ R + L ER+ +E RR V+ ELHD + QT T Sbjct: 122 LMGATIDRIEKESERGELVAALKEREKRLEMLLERIFTAQEEERRRVSHELHDGVAQTAT 181 Query: 322 A-IRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 A +R G AA + G ++ + +RR++G LRP LDDL L A++ Sbjct: 182 ALVRILEGA--ETAAKKSGASSDGVSPTDVARSLVSELRRVIGGLRPTLLDDLGLPAALQ 239 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQR------VTLFRVCQEGLNNIVKHADASA- 433 SL +E EG + + R QR LFRV QE + NI KHA Sbjct: 240 SLCDGLEAEGFTVSQRITPRA--------QRHCPLIETALFRVAQEAIANIHKHAGGPCE 291 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPP-----GSGQ-QGFGLTGMRERVTALGGTLHISCLH 487 V+++ + ++L I D G+G G G G+ M+ER+TA+GGTL + Sbjct: 292 VSVEADLHSDPVVLRISDHGNGPSEETRLRGDGPGHNVGIEVMKERMTAIGGTLEWRAVD 351 Query: 488 GTRVSV 493 G V+V Sbjct: 352 GGGVTV 357 >UniRef50_C0Q9H3 Sensory box histidine kinase/response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H3_DESAH Length = 557 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 108/225 (48%), Gaps = 14/225 (6%) Query: 283 LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADNASVK 341 L+ R Q L+ LL +E R+ +A LHDD+GQ++T ++ Q I ++ D K Sbjct: 328 LKNSEKRLQFLSSHLLTAQEEERKKIAYMLHDDLGQSLTLLKLQIRAIEMKIEKDGKGAK 387 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR--GIVSHLEW 399 L + + VR + L P L DL L A+ SL E GR + HL+ Sbjct: 388 ADCCLAMKNISKTIENVREISHSLTPSILKDLGLSAALHSL---FEYFGRYFNVHRHLDM 444 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG-----S 454 ++ L++ ++ ++R+ QE NIV+HA A + + + + R I+D+G + Sbjct: 445 TDMDNQLTQQSKILVYRIFQEAFTNIVRHAKADQIRVCVDRYNNRYRFDIQDNGIGFDLN 504 Query: 455 GLPPGS-GQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLP 496 GL S G GLT M ERV LGG L I GTR+ +P Sbjct: 505 GLQGNSLKDSGMGLTTMNERVRMLGGQLRIENRMCGGTRLWFEIP 549 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P09835 Sensor protein uhpB n=121 Tax=Gammaproteobacteri... 627 e-178 UniRef50_A4W4T8 Integral membrane sensor signal transduction his... 547 e-154 UniRef50_D0YYF7 Sensor histidine protein kinase UhpB glucose-6-p... 492 e-137 UniRef50_D0M861 Sensor histidine protein kinase UhpB glucose-6-p... 474 e-132 UniRef50_Q65Q67 BaeS protein n=5 Tax=Pasteurellaceae RepID=Q65Q6... 439 e-122 UniRef50_A8G803 Integral membrane sensor signal transduction his... 438 e-121 UniRef50_C5BB53 Sensor protein UhpB n=2 Tax=Edwardsiella RepID=C... 420 e-116 UniRef50_A1JTJ3 Sensor protein n=48 Tax=Enterobacteriaceae RepID... 392 e-107 UniRef50_A5EZW7 Sensor protein UhpB n=35 Tax=Vibrionaceae RepID=... 385 e-105 UniRef50_D2TKU9 Two-component system sensor histidine kinase n=1... 370 e-101 UniRef50_UPI0000E0F7AF sensory histidine kinase in two-component... 295 2e-78 UniRef50_UPI0001AEBEC0 2-keto-4-pentenoate hydratase, putative n... 284 6e-75 UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales... 254 4e-66 UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ... 251 5e-65 UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syn... 250 8e-65 UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9... 250 1e-64 UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteri... 245 4e-63 UniRef50_C0N6H6 Histidine kinase domain protein n=1 Tax=Methylop... 244 5e-63 UniRef50_Q1H355 Sensor protein n=3 Tax=Methylophilaceae RepID=Q1... 244 7e-63 UniRef50_Q0KDJ4 Signal transduction histidine kinase containing ... 243 1e-62 UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX... 242 3e-62 UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kin... 240 1e-61 UniRef50_Q1H352 Signal transduction histidine kinase, glucose-6-... 239 2e-61 UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q4... 238 5e-61 UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinas... 237 7e-61 UniRef50_C6XAP9 PAS/PAC sensor signal transduction histidine kin... 237 8e-61 UniRef50_B0P062 Putative uncharacterized protein n=1 Tax=Clostri... 236 1e-60 UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3... 236 1e-60 UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Br... 236 2e-60 UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=... 236 2e-60 UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinas... 235 3e-60 UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophi... 234 6e-60 UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylo... 233 1e-59 UniRef50_B6JD37 Signal transduction histidine kinase containing ... 233 1e-59 UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=T... 233 1e-59 UniRef50_C0N6J6 ATPase, histidine kinase-, DNA gyrase B-, and HS... 232 2e-59 UniRef50_Q39TN6 PAS/PAC sensor signal transduction histidine kin... 232 3e-59 UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinas... 231 4e-59 UniRef50_B4UAL2 Integral membrane sensor signal transduction his... 231 4e-59 UniRef50_Q0B944 Multi-sensor signal transduction histidine kinas... 231 4e-59 UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinas... 231 6e-59 UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kin... 231 6e-59 UniRef50_B2A6W3 Integral membrane sensor signal transduction his... 230 6e-59 UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kin... 230 7e-59 UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Ox... 230 7e-59 UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinas... 230 1e-58 UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 ... 230 1e-58 UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinas... 229 1e-58 UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafnie... 229 2e-58 UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kin... 229 3e-58 UniRef50_B8G147 Multi-sensor signal transduction histidine kinas... 229 3e-58 UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafn... 228 4e-58 UniRef50_A0LKW7 PAS/PAC sensor signal transduction histidine kin... 228 4e-58 UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kin... 227 5e-58 UniRef50_A6WW19 Integral membrane sensor signal transduction his... 227 8e-58 UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanth... 227 9e-58 UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=De... 226 1e-57 UniRef50_A6GQJ7 PAS/PAC sensor signal transduction histidine kin... 226 1e-57 UniRef50_Q01NC5 Integral membrane sensor signal transduction his... 226 2e-57 UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kin... 226 2e-57 UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Sy... 225 2e-57 UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinas... 225 2e-57 UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kin... 225 2e-57 UniRef50_D1CE67 Multi-sensor signal transduction histidine kinas... 225 3e-57 UniRef50_A1HRV6 Integral membrane sensor signal transduction his... 225 3e-57 UniRef50_A6TSW3 Histidine kinase n=2 Tax=Alkaliphilus RepID=A6TS... 225 3e-57 UniRef50_A0LNC5 PAS/PAC sensor signal transduction histidine kin... 225 3e-57 UniRef50_UPI0001693FB4 two-component sensor histidine kinase of ... 225 4e-57 UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kin... 224 5e-57 UniRef50_UPI000174566C two-component hybrid sensor and regulator... 224 6e-57 UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kin... 224 7e-57 UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Sy... 224 7e-57 UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus N... 224 1e-56 UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kin... 223 1e-56 UniRef50_A8LRP9 Integral membrane sensor signal transduction his... 223 1e-56 UniRef50_A0LPI6 PAS/PAC sensor signal transduction histidine kin... 223 1e-56 UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Lab... 223 2e-56 UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase ... 223 2e-56 UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus... 222 2e-56 UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=... 222 2e-56 UniRef50_C6P0E7 PAS/PAC sensor signal transduction histidine kin... 222 2e-56 UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinas... 222 4e-56 UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulat... 221 4e-56 UniRef50_Q5NZX5 Putative sensory protein, two-component system n... 221 5e-56 UniRef50_C0GKL6 Histidine kinase n=1 Tax=Dethiobacter alkaliphil... 221 5e-56 UniRef50_B1Y742 Response regulator receiver sensor signal transd... 221 5e-56 UniRef50_Q7X326 Putative sensory transduction histidine kinase n... 221 6e-56 UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Bu... 220 7e-56 UniRef50_A5FQU4 PAS/PAC sensor signal transduction histidine kin... 220 7e-56 UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kin... 220 8e-56 UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kin... 220 8e-56 UniRef50_B8FDP4 Histidine kinase n=1 Tax=Desulfatibacillum alken... 220 8e-56 UniRef50_A0LN82 Response regulator receiver sensor signal transd... 220 1e-55 UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinas... 219 1e-55 UniRef50_Q24Z69 Putative uncharacterized protein n=1 Tax=Desulfi... 219 2e-55 UniRef50_Q11VH8 Sensor histidine protein kinase n=1 Tax=Cytophag... 219 2e-55 UniRef50_C5CVV4 Histidine kinase n=2 Tax=Burkholderiales RepID=C... 218 3e-55 UniRef50_A9KLX5 Histidine kinase n=1 Tax=Clostridium phytofermen... 218 3e-55 UniRef50_B1ZVP9 Response regulator receiver sensor signal transd... 218 3e-55 UniRef50_A1HU07 Integral membrane sensor signal transduction his... 218 3e-55 UniRef50_D1ABJ2 Histidine kinase n=1 Tax=Thermomonospora curvata... 218 3e-55 UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax... 218 5e-55 UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 217 6e-55 UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kin... 217 6e-55 UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobact... 217 6e-55 UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobac... 217 7e-55 UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kin... 217 8e-55 UniRef50_UPI00016AFAA4 response regulator/sensory box histidine ... 217 1e-54 UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Li... 217 1e-54 UniRef50_C9PG27 Sensor histidine kinase n=2 Tax=Vibrio RepID=C9P... 217 1e-54 UniRef50_UPI0001692E35 hypothetical protein Plarl_02603 n=1 Tax=... 216 1e-54 UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 ... 216 2e-54 UniRef50_Q62SG3 Two-component sensor histidine kinase n=4 Tax=Ba... 216 2e-54 UniRef50_A1S6S1 Sensor histidine kinase n=1 Tax=Shewanella amazo... 216 2e-54 UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinas... 216 2e-54 UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine... 215 3e-54 UniRef50_B1YLL4 Histidine kinase n=2 Tax=Exiguobacterium RepID=B... 215 4e-54 UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4... 215 4e-54 UniRef50_P54663 Sensor protein degS n=33 Tax=Bacillales RepID=DE... 215 4e-54 UniRef50_C3RLD8 Two-component system sensor histidine kinase n=3... 215 4e-54 UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Be... 215 4e-54 UniRef50_C9RTT5 PAS/PAC sensor signal transduction histidine kin... 215 4e-54 UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinas... 215 5e-54 UniRef50_Q60AR7 Sensor protein n=1 Tax=Methylococcus capsulatus ... 214 5e-54 UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus Re... 214 5e-54 UniRef50_C3BDP5 Putative uncharacterized protein n=3 Tax=Bacillu... 213 8e-54 UniRef50_Q251B4 Putative uncharacterized protein n=1 Tax=Desulfi... 213 9e-54 UniRef50_C9LVI4 Histidine kinase n=1 Tax=Selenomonas sputigena A... 213 9e-54 UniRef50_B6BUB0 Multi-sensor signal transduction histidine kinas... 213 9e-54 UniRef50_Q01NL1 Histidine kinase n=1 Tax=Candidatus Solibacter u... 213 1e-53 UniRef50_C7RKP8 PAS/PAC sensor signal transduction histidine kin... 213 1e-53 UniRef50_Q747N5 Sensory box histidine kinase n=2 Tax=Geobacter R... 213 1e-53 UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 T... 213 1e-53 UniRef50_B7CDS9 Putative uncharacterized protein n=1 Tax=Eubacte... 213 1e-53 UniRef50_B9XGC5 Response regulator receiver sensor signal transd... 213 1e-53 UniRef50_Q01N85 Integral membrane sensor signal transduction his... 213 2e-53 UniRef50_A5F1R9 Sensor histidine kinase n=52 Tax=Vibrionales Rep... 213 2e-53 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 213 2e-53 UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Ba... 213 2e-53 UniRef50_A5EGA4 Bacteriophytochrome n=13 Tax=Rhizobiales RepID=A... 212 2e-53 UniRef50_Q7WZY5 Oxygen sensor histidine kinase nreB n=64 Tax=Sta... 212 2e-53 UniRef50_Q2BPE6 Sensor histidine kinase n=1 Tax=Neptuniibacter c... 212 2e-53 UniRef50_Q5WK46 Two-component sensor histidine kinase of nitrate... 212 2e-53 UniRef50_Q0A524 Signal transduction histidine kinase, glucose-6-... 212 2e-53 UniRef50_C0QFU9 Two-component protein, sensory box histidine kin... 212 2e-53 UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp.... 212 3e-53 UniRef50_A0LNB4 PAS/PAC sensor signal transduction histidine kin... 212 3e-53 UniRef50_C7QHJ0 Histidine kinase n=1 Tax=Catenulispora acidiphil... 212 4e-53 UniRef50_UPI0000E0F7D9 sensory histidine kinase in two-component... 212 4e-53 UniRef50_B1XZ31 Histidine kinase n=5 Tax=cellular organisms RepI... 211 4e-53 UniRef50_C6D5A2 Histidine kinase n=5 Tax=Bacillales RepID=C6D5A2... 211 4e-53 UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter s... 211 4e-53 UniRef50_A2SDA5 Signal transduction histidine kinase-like protei... 211 5e-53 UniRef50_A1VQL5 Integral membrane sensor signal transduction his... 211 6e-53 UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM... 211 7e-53 UniRef50_B9J9Z4 Two-component sensor histidine kinase protein n=... 210 8e-53 UniRef50_Q0EZ32 HrpX related protein n=1 Tax=Mariprofundus ferro... 210 8e-53 UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=... 210 9e-53 UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC... 210 9e-53 UniRef50_C0Q9H3 Sensory box histidine kinase/response regulator ... 210 1e-52 UniRef50_B1KE05 Histidine kinase n=1 Tax=Shewanella woodyi ATCC ... 210 1e-52 UniRef50_C6WWI1 Histidine kinase n=1 Tax=Methylotenera mobilis J... 210 1e-52 UniRef50_Q5P5H6 Two-component sensor n=1 Tax=Aromatoleum aromati... 210 1e-52 UniRef50_C0ZDE7 Two-component sensor histidine kinase n=1 Tax=Br... 209 2e-52 UniRef50_Q3BTZ2 Sensor protein n=13 Tax=Xanthomonadaceae RepID=Q... 209 2e-52 UniRef50_C5ATJ2 Sensor histidine kinase n=1 Tax=Methylobacterium... 209 2e-52 UniRef50_UPI00016C46BE putative PAS/PAC sensor protein n=1 Tax=G... 209 2e-52 UniRef50_A1K959 Putative sensory box histidine kinase n=1 Tax=Az... 209 2e-52 UniRef50_C8XB57 Histidine kinase n=2 Tax=Actinomycetales RepID=C... 209 2e-52 UniRef50_Q2SNP1 Signal transduction histidine kinase, glucose-6-... 208 3e-52 UniRef50_Q220B2 Response regulator receiver sensor signal transd... 208 3e-52 UniRef50_B9TCE7 Sensory transduction histidine kinase, putative ... 208 3e-52 UniRef50_Q7WNB8 Two-component system sensor kinase n=2 Tax=Borde... 208 3e-52 UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacil... 208 3e-52 UniRef50_B3E9K4 Response regulator receiver sensor signal transd... 208 3e-52 UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kin... 208 4e-52 UniRef50_A0QSI7 Sensor histidine kinase n=6 Tax=Mycobacterium Re... 208 4e-52 UniRef50_C6D204 PAS/PAC sensor signal transduction histidine kin... 207 7e-52 UniRef50_A1SCE2 Histidine kinase, dimerisation and phosphoaccept... 207 7e-52 UniRef50_B0UCY8 Integral membrane sensor signal transduction his... 207 7e-52 UniRef50_Q11VM9 Two-component sensor histidine kinase n=1 Tax=Cy... 207 7e-52 UniRef50_A1WDW7 Multi-sensor signal transduction histidine kinas... 207 7e-52 UniRef50_Q2BNR8 Sensor histidine kinase n=1 Tax=Neptuniibacter c... 207 9e-52 UniRef50_A7LKW0 Methanol utilization control sensor n=1 Tax=uncu... 207 9e-52 UniRef50_B9E9D7 Two-component sensor histidine kinase n=1 Tax=Ma... 207 1e-51 UniRef50_A5FS37 PAS/PAC sensor signal transduction histidine kin... 207 1e-51 UniRef50_UPI0001C3138E integral membrane sensor signal transduct... 207 1e-51 UniRef50_B9X9T9 Histidine kinase n=1 Tax=bacterium Ellin514 RepI... 207 1e-51 UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine... 207 1e-51 UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID... 206 1e-51 UniRef50_A4JE38 PAS/PAC sensor signal transduction histidine kin... 206 1e-51 UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella a... 206 1e-51 UniRef50_A6T1A4 Signal transduction histidine kinase n=2 Tax=Oxa... 206 1e-51 UniRef50_C1DSJ2 Intracellular sensory histidine protein kinase, ... 206 2e-51 UniRef50_C1DEQ8 Periplasmic sensory histidine protein kinase, tw... 206 2e-51 UniRef50_C0A3D8 Signal transduction histidine kinase-like protei... 206 2e-51 UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thio... 205 2e-51 UniRef50_D1UD43 Histidine kinase n=2 Tax=Burkholderia RepID=D1UD... 205 3e-51 UniRef50_B7L2Y8 Histidine kinase n=1 Tax=Methylobacterium chloro... 205 3e-51 UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID... 205 3e-51 UniRef50_B8CZJ7 Integral membrane sensor signal transduction his... 205 4e-51 UniRef50_C7LUF4 PAS/PAC sensor signal transduction histidine kin... 205 4e-51 UniRef50_C0N7Q8 ATPase, histidine kinase-, DNA gyrase B-, and HS... 205 5e-51 UniRef50_Q07MS8 Signal transduction histidine kinase, glucose-6-... 204 5e-51 UniRef50_C4ZM16 Multi-sensor signal transduction histidine kinas... 204 5e-51 UniRef50_B2ID99 Integral membrane sensor signal transduction his... 204 6e-51 UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=De... 204 7e-51 UniRef50_A9BNQ5 Histidine kinase n=1 Tax=Delftia acidovorans SPH... 204 7e-51 UniRef50_Q0G064 Putative uncharacterized protein n=1 Tax=Fulvima... 204 7e-51 UniRef50_C6J152 Histidine kinase dimerization and phosphoaccepto... 204 8e-51 UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C... 203 8e-51 UniRef50_B1ZPK4 Histidine kinase n=1 Tax=Opitutus terrae PB90-1 ... 203 9e-51 UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Ba... 203 9e-51 UniRef50_UPI0001C314AD GAF sensor signal transduction histidine ... 203 1e-50 UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderi... 203 1e-50 UniRef50_Q01SI4 Sensor protein n=1 Tax=Candidatus Solibacter usi... 203 1e-50 UniRef50_D2S9S7 Integral membrane sensor signal transduction his... 203 1e-50 UniRef50_A1ATT5 PAS/PAC sensor signal transduction histidine kin... 203 1e-50 UniRef50_A6G6J8 Response regulator receiver:ATP-binding region, ... 203 1e-50 UniRef50_C7I0E3 Histidine kinase n=1 Tax=Thiomonas intermedia K1... 203 2e-50 UniRef50_C1A5E7 Two-component histidine kinase n=1 Tax=Gemmatimo... 202 2e-50 UniRef50_A8H4Y1 Histidine kinase n=2 Tax=Shewanella RepID=A8H4Y1... 202 2e-50 UniRef50_A1TL79 Histidine kinase n=4 Tax=Burkholderiales RepID=A... 202 2e-50 UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=... 202 2e-50 UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuri... 202 3e-50 UniRef50_A6GNY2 Histidine Kinase n=1 Tax=Limnobacter sp. MED105 ... 202 3e-50 UniRef50_A9B913 Multi-sensor signal transduction histidine kinas... 202 3e-50 UniRef50_C5V178 Multi-sensor signal transduction histidine kinas... 202 3e-50 UniRef50_UPI00017893B7 integral membrane sensor signal transduct... 202 4e-50 UniRef50_C2FSZ8 Possible sensor kinase of Zn/Pb responsive two-c... 202 4e-50 UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 201 4e-50 UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicate... 201 4e-50 UniRef50_Q0B0G7 Histidine kinase n=1 Tax=Syntrophomonas wolfei s... 201 4e-50 UniRef50_Q3M1D8 Serine/threonine protein kinase and signal trans... 201 5e-50 UniRef50_C0N7V6 ATPase, histidine kinase-, DNA gyrase B-, and HS... 201 5e-50 UniRef50_Q13QX0 Periplasmic Sensor signal transduction Histidine... 201 5e-50 UniRef50_Q5NZZ4 Two-component system sensor kinase n=1 Tax=Aroma... 201 6e-50 UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibaci... 200 8e-50 UniRef50_Q1NT92 ATP-binding region, ATPase-like:Histidine kinase... 200 8e-50 UniRef50_C6J7D3 ATP-binding region ATPase domain-containing prot... 200 8e-50 Sequences not found previously or not previously below threshold: UniRef50_Q3IGR8 Sensory histidine kinase in two-component regula... 255 3e-66 UniRef50_B2AKD3 Putative multi-sensor signal transduction histid... 217 8e-55 UniRef50_Q485W7 Sensor histidine kinase n=3 Tax=Alteromonadales ... 209 2e-52 UniRef50_B2GCM4 Two-component sensor histidine kinase n=8 Tax=La... 206 2e-51 UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides ... 205 3e-51 UniRef50_C0GH42 Multi-sensor signal transduction histidine kinas... 204 6e-51 UniRef50_C8WS09 PAS/PAC sensor signal transduction histidine kin... 204 7e-51 UniRef50_B0TH54 Sensor histidine kinase, putative n=1 Tax=Heliob... 204 7e-51 UniRef50_B8FX95 Sensor DegS domain protein n=3 Tax=cellular orga... 203 1e-50 UniRef50_A9B046 Integral membrane sensor signal transduction his... 200 1e-49 >UniRef50_P09835 Sensor protein uhpB n=121 Tax=Gammaproteobacteria RepID=UHPB_ECOLI Length = 500 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 500/500 (100%), Positives = 500/500 (100%) Query: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW Sbjct: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 Query: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT Sbjct: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 Query: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN Sbjct: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 Query: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI Sbjct: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 Query: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET Sbjct: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR Sbjct: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 Query: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE Sbjct: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT Sbjct: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 Query: 481 LHISCLHGTRVSVSLPQRYV 500 LHISCLHGTRVSVSLPQRYV Sbjct: 481 LHISCLHGTRVSVSLPQRYV 500 >UniRef50_A4W4T8 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Enterobacter RepID=A4W4T8_ENT38 Length = 499 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 423/498 (84%), Positives = 452/498 (90%), Gaps = 1/498 (0%) Query: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 M FSRL++ +A FFIFSAAWFCLWSISLHLVERP++AVLLFPFGLRLGLMLQCPRGYW Sbjct: 1 MNPFFSRLVSGVASFFIFSAAWFCLWSISLHLVERPELAVLLFPFGLRLGLMLQCPRGYW 60 Query: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 PVLLGAEWLL++WL Q V L H PLL+IG +LTLLPVALISRYRHQRDWRTLL QGAAL Sbjct: 61 PVLLGAEWLLLFWLAQEVALAHLPLLIIGGVLTLLPVALISRYRHQRDWRTLLWQGAALI 120 Query: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 AAALLQSLPW+ +E NA LLTLTGGLTLAP CLV WHYL + W PLGP+LVSQP+N Sbjct: 121 AAALLQSLPWIGQ-QEMLNAFLLTLTGGLTLAPTCLVIWHYLTSTVWQPLGPALVSQPVN 179 Query: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 WR RHL+WYLLLFV+SLWLQLGLP ELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI Sbjct: 180 WRARHLIWYLLLFVVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 239 Query: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 ALIASQTW DHPVDLLLSLL QSLTGLLLGAGIQRLRELNQSLQ ELARN+ LAERL+ET Sbjct: 240 ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQNELARNRRLAERLVET 299 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 EESVR++VARELHDDIGQTITAIRTQAGIVQRLA +N V QSG IEQLSLGVYD+VRR Sbjct: 300 EESVRQEVARELHDDIGQTITAIRTQAGIVQRLAPENGGVIQSGAHIEQLSLGVYDSVRR 359 Query: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 LLGRLRPRQLDDL+L QA+RSLMREMELE RGIVSHL+W IDES LSE QRVTLFRVCQE Sbjct: 360 LLGRLRPRQLDDLSLAQAVRSLMREMELESRGIVSHLDWHIDESTLSEGQRVTLFRVCQE 419 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 GLNNIVKHA+ASAVTL+GWQQDERLML+IEDDG GLPPGSGQQGFGL GMRERVTALGGT Sbjct: 420 GLNNIVKHANASAVTLKGWQQDERLMLLIEDDGCGLPPGSGQQGFGLAGMRERVTALGGT 479 Query: 481 LHISCLHGTRVSVSLPQR 498 L ISC HGTRVSVSLP+R Sbjct: 480 LAISCTHGTRVSVSLPRR 497 >UniRef50_D0YYF7 Sensor histidine protein kinase UhpB glucose-6-phosphate specific n=10 Tax=Gammaproteobacteria RepID=D0YYF7_LISDA Length = 510 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 216/507 (42%), Positives = 310/507 (61%), Gaps = 19/507 (3%) Query: 8 LITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAE 67 ++T I FF+ WFCLW IS + + ++A+L FPF RLG++L P+ YW VL GAE Sbjct: 5 IVTSICSFFLVLCTWFCLWIISSYFIMEAELAILFFPFAFRLGMVLHTPKKYWFVLYGAE 64 Query: 68 WLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRD------WRTLLLQGAALTA 121 W L L + + ++I S+ +L V ++ ++ W L + GA + Sbjct: 65 WFLTISLAILLAQPQWISVLISSIASLPIVWYADKFYLSKEASSATQWYQLSILGAVIGI 124 Query: 122 AALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINW 181 +LL L G S LL+++TGGL + P C + W+YL +W PL ++V+ P+ Sbjct: 125 TSLLNMLIVSHQGVSSGLVLLVSITGGLMIVPSCYLIWNYLFKQSWSPLTANVVAYPVAL 184 Query: 182 RGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIA 241 R RH++ Y ++F++S+ QL LP+EL RF PFCLA+PII LA+ YGWQGAL+ TL+N+IA Sbjct: 185 RARHVIVYAVVFLLSILAQLLLPEELKRFAPFCLAIPIILLAFRYGWQGALLGTLLNSIA 244 Query: 242 LIASQTWRDH--PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE 299 LIA ++ + DL+LSL Q+LTG+LLG G+QR RELN L+ EL RNQ L+ +L++ Sbjct: 245 LIAVRSGVSNIEITDLMLSLSAQTLTGILLGIGVQRQRELNLYLRHELERNQSLSRQLVK 304 Query: 300 TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVR 359 EESVR+++ARELHD+IGQ ITAIR QAGI++R+ ++ +IE LSL VYD + Sbjct: 305 AEESVRKNIARELHDEIGQNITAIRMQAGILKRVETSPMG-EKCASMIEGLSLNVYDTTK 363 Query: 360 RLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH-LEWRIDESALSENQRVTLFRVC 418 LL +LRP+ LDDL L+ AI L+ E+ + + + + ++ VTL+R+C Sbjct: 364 GLLTQLRPKTLDDLGLKAAIEQLIFELRSHQMSVELNWFPEQSETITFNDETNVTLYRIC 423 Query: 419 QEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALG 478 QE LNNI K+A A+ V L DE++ L I D+G G +GFGL GMRERV ALG Sbjct: 424 QEALNNIAKYAQATKVVLNFHF-DEQIELSISDNGIGFKQEDTLKGFGLRGMRERVQALG 482 Query: 479 GTLHISCLH--------GTRVSVSLPQ 497 G I+ + GT++ V LPQ Sbjct: 483 GEFSITSIPKYSEQIKSGTQLHVRLPQ 509 >UniRef50_D0M861 Sensor histidine protein kinase UhpB glucose-6-phosphate specific n=18 Tax=Gammaproteobacteria RepID=D0M861_VIBSE Length = 500 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 209/495 (42%), Positives = 313/495 (63%), Gaps = 7/495 (1%) Query: 9 ITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEW 68 +T I F+ + AWFCLW I+ + V P++A+LLFPF LRLG+ L YWP + +EW Sbjct: 6 VTTICGLFVMACAWFCLWVIAYYFVNDPELAILLFPFALRLGIALHTRTAYWPTIYVSEW 65 Query: 69 LLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSL 128 L L + + ++I S+ ++ + +Y + R L + G + +A + + Sbjct: 66 ALTIALATLLEQPQWLTVLIASVASIPVTLIAKKYYYGDQNRHLAVMGVVIIISAFINVM 125 Query: 129 PWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVW 188 +H + L +++GGL + P+C + W YL + W PL L+S + ++ RH+V Sbjct: 126 AVGFHVPSVYMVWLASISGGLLVVPMCYLLWSYLFQSRWSPLSSLLLSNAVVFQVRHIVL 185 Query: 189 YLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTW 248 Y LL + S+ +Q LP+EL RF PFC+A+PII LA YGWQGAL+AT++N+IALIA+++ Sbjct: 186 YALLLIGSILVQTSLPEELKRFAPFCMAIPIIVLALRYGWQGALLATMLNSIALIAARSG 245 Query: 249 RDHP--VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRR 306 + DLLLSL Q++TG++LG G+Q+ ++LN L+ ELARNQ+L+ +L++ EESVRR Sbjct: 246 VSNLEITDLLLSLSAQTITGIMLGLGVQKQKDLNHKLRGELARNQNLSRQLIKAEESVRR 305 Query: 307 DVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 D+ARELHD+IGQ ITAIRTQA I++R+ SV +IE LSL VYD +RLL +LR Sbjct: 306 DIARELHDEIGQNITAIRTQANIIKRVNNAETSVG-CADMIEGLSLNVYDTTKRLLSKLR 364 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P+ LDDL L++++ L REME G L W+ D ++LS+ +VTLFR+CQE LNN Sbjct: 365 PKMLDDLDLKESVEQLTREMEFANHGTNVQLNWQGDYTSLSDTLKVTLFRLCQESLNNAA 424 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL 486 K+A+A + ++ + + L+I DDG G +G G+ GM+ERV ALGG + I Sbjct: 425 KYAEAQLINIELTIGEAAVSLMINDDGVGFKVQDSMKGMGVRGMQERVHALGGKMVIYST 484 Query: 487 H----GTRVSVSLPQ 497 GT++S++LP+ Sbjct: 485 SDQVIGTQISITLPK 499 >UniRef50_Q65Q67 BaeS protein n=5 Tax=Pasteurellaceae RepID=Q65Q67_MANSM Length = 503 Score = 439 bits (1130), Expect = e-122, Method: Composition-based stats. Identities = 207/504 (41%), Positives = 314/504 (62%), Gaps = 13/504 (2%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 + +IT+I +FI A+F +W+IS +L+ +A+L PF LRLG+ L P+ +W V Sbjct: 1 MNAIITLIYSWFIMLCAYFSVWAISDYLLGNSLLALLFLPFALRLGINLHTPKIFWLVSY 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAAL 124 AE+ ++ L A ++ +I S+ +L + +Y + R L +QG +L Sbjct: 61 CAEFCILSLLMYASPNEYYLPAIILSIASLPVTFIGQKYYQGNEARKLAVQGVIAVFVSL 120 Query: 125 LQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGR 184 L + + L +LTG L + P C + + YL W+PL SLV +PI+ R + Sbjct: 121 LNGIVSFSLSISFFYTFLTSLTGMLLIMPACFLGYDYLFKRKWIPLTASLVHKPISLRAK 180 Query: 185 HLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIA 244 H++ Y+LLF++++++Q+ +P+E RF F LA+PII LA+HYGWQGAL+ TL+N+IALIA Sbjct: 181 HILIYILLFLLNIFIQVDIPEEFHRFALFFLAIPIILLAYHYGWQGALLGTLLNSIALIA 240 Query: 245 SQT--WRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 S R DL LS+ Q++TG+ LG IQR R+LN SL EL RN+ L +L+ TEE Sbjct: 241 STGSFSRGELTDLFLSISAQTVTGIFLGLAIQRQRDLNNSLMVELNRNRTLTRQLINTEE 300 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLL 362 S+R++++RELHD+IGQ ITAIRTQA I++RL + +++ G +IEQLSL +YD + LL Sbjct: 301 SIRKEISRELHDEIGQNITAIRTQASIMKRLET-SPKIEKVGSMIEQLSLNIYDTTKGLL 359 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE-SALSENQRVTLFRVCQEG 421 R+RP+ LDDL L+QA+++L E++LE GI + L W + L Q +TL+R+CQEG Sbjct: 360 NRIRPKMLDDLELQQALQNLFLELDLENHGISTALFWENKQNEPLDHIQEITLYRLCQEG 419 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTL 481 LNNIVK++ AS V + + + + L+I+D+G G P + + GFGL GM+ERV L G Sbjct: 420 LNNIVKYSHASQVIISVLIRKD-IELIIQDNGDGFNPETVKSGFGLQGMKERVDILCGKF 478 Query: 482 HISC--------LHGTRVSVSLPQ 497 + HGT + ++LP+ Sbjct: 479 QLISKERSVSPQQHGTTIKITLPR 502 >UniRef50_A8G803 Integral membrane sensor signal transduction histidine kinase n=50 Tax=Enterobacteriaceae RepID=A8G803_SERP5 Length = 513 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 230/505 (45%), Positives = 325/505 (64%), Gaps = 14/505 (2%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 RLIT +A FFI++ + FCLW I L++ P A+LLFPFGLR+G++LQ P +WP +L Sbjct: 1 MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGIL 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVA-----LISRYRHQR-DWRTLLLQGAA 118 A+ LL+ L G + LL + ++ + R++ +W+ L+QGA Sbjct: 61 LADLLLMVVLADQFGYGPALWASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQGAV 120 Query: 119 LTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQP 178 + AALLQ+L W E ALLL L GG T+AP CL+ WHYLA W+PL P L+ +P Sbjct: 121 VAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLLWHYLARQIWVPLEPGLIHKP 180 Query: 179 INWRGRHLVWYLLLFVISLWLQLGL-PDELSRFTPFCLALPIIALAWHYGWQGALIATLM 237 + R RHL YLLLF +S+WLQ + EL RF PFCLA+PI+ +++ YGWQGAL+ATL+ Sbjct: 181 VTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLATLL 240 Query: 238 NAIALIASQTWRDH-PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAER 296 N + L+A++ + DLLLSLL QSLTGLLLGAGIQR RELNQ L+ L N+ LA Sbjct: 241 NGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLARA 300 Query: 297 LLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYD 356 L+ EE RR+VARELHD++GQTIT IRTQA I++RLA V + I+ L+L VYD Sbjct: 301 LVTAEEQTRREVARELHDEVGQTITVIRTQASIIKRLAP-QPQVMGCAEAIDTLALRVYD 359 Query: 357 AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFR 416 V +L +L P L++L L A+ +++RE + +VS ++W++ + L E ++TL+R Sbjct: 360 GVHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVMQWQVPDELLDETLKITLYR 419 Query: 417 VCQEGLNNIVKHADASAVTL--QGWQQDERL---MLVIEDDGSGLPPGSGQQGFGLTGMR 471 VCQEG+ N+ +HA AS + L + Q+ RL +L I D+G G+ + G+GL GM+ Sbjct: 420 VCQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRGMQ 479 Query: 472 ERVTALGGTLHISCLHGTRVSVSLP 496 ER++ALGG L ++ +GT ++V LP Sbjct: 480 ERISALGGRLRLTSENGTCLNVILP 504 >UniRef50_C5BB53 Sensor protein UhpB n=2 Tax=Edwardsiella RepID=C5BB53_EDWI9 Length = 510 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 237/502 (47%), Positives = 325/502 (64%), Gaps = 11/502 (2%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 RLI+ IA FF ++ A FCLW+I LV P A+LLFPFGLR+G++LQ P YWP +L Sbjct: 1 MQRLISSIAIFFCYTIAGFCLWAIGAALVTAPVDALLLFPFGLRMGILLQTPHRYWPGIL 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALIS------RYRHQRDWRTLLLQGAA 118 + + +L+ +G + +G LL + +A S + + +WR L QGA Sbjct: 61 VGDVAVQLFLSHQLGGGSWLWGTLGGLLLCMALAWASGEWLRRQQQQGAEWRWPLQQGAL 120 Query: 119 LTAAALLQSLPW-LWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQ 177 + AALLQ+L W L G LLL L GGLT+AP CL+ WHYLA WLPL P ++ Sbjct: 121 VALAALLQALSWSLATGTMPGPPLLLGLCGGLTVAPTCLLIWHYLAQQRWLPLTPGILHC 180 Query: 178 PINWRGRHLVWYLLLFVISLWLQ-LGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL 236 P+N R RH+ YLLLF +SLWLQ L +L RF FCLA+PI+ +++ YGWQGAL+ATL Sbjct: 181 PVNLRLRHIGGYLLLFALSLWLQHLAQHADLRRFVLFCLAIPIVFMSYRYGWQGALLATL 240 Query: 237 MNAIALIASQTWRDHP-VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 +N + LIA++ D P DLLLSLL QSLTG+LLGAGI+R R+LN+ L++ LA N+ LA Sbjct: 241 LNGVVLIATEPQGDAPHRDLLLSLLAQSLTGMLLGAGIERQRDLNRQLKQRLAENRSLAR 300 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 L+ +E RR++ARELHD++GQTIT IRTQAGI++RL +D + S + IE +L VY Sbjct: 301 SLVMAQEVTRREIARELHDEVGQTITVIRTQAGIIRRL-SDEPRLLASAEAIENHALRVY 359 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 D V LL +L P L +L L A+ +L+R++ +G + L W ID++AL + ++TL+ Sbjct: 360 DGVHDLLAQLWPASLSNLPLSAALSALLRDLVPPEQGTTARLSWHIDDAALDDTLKITLY 419 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQ-DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERV 474 R+CQEG+ N +HA AS + +QGWQ L + I DDG G+ S G+GL G+RER+ Sbjct: 420 RLCQEGVTNACRHARASHIEVQGWQDTGGLLHVNICDDGCGVDTLSLMPGYGLRGLRERI 479 Query: 475 TALGGTLHISCLHGTRVSVSLP 496 A+GG LH+ GTR+ V LP Sbjct: 480 CAMGGELHLESHQGTRLVVILP 501 >UniRef50_A1JTJ3 Sensor protein n=48 Tax=Enterobacteriaceae RepID=A1JTJ3_YERE8 Length = 525 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 178/499 (35%), Positives = 262/499 (52%), Gaps = 16/499 (3%) Query: 11 VIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLL 70 + FS +W LW+IS +L + AVLL P GLRL LM+ PR YW VLL E + Sbjct: 10 SLFLAIFFSLSWLALWTISFYLSDDGLHAVLLLPQGLRLALMILLPRRYWSVLLLTECVA 69 Query: 71 IYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQR--DWRTLLLQGAALTAAALLQSL 128 ++WL + L L+M+ L+LLP L R+ H W+ LLL AA+T ++L L Sbjct: 70 LWWL-HSEQLQPIVLIMLSPFLSLLPAELTQRFWHHYTLYWQRLLLLLAAVTGNSVLHGL 128 Query: 129 PW-LWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLV 187 W LL T TGG+ L P + + YL L + P R L+ Sbjct: 129 VLGFWLPLPLTQTLLATFTGGILLVPFTYLIYEYLKQQHIRNLFSQQMPDP-PLRTSLLI 187 Query: 188 WYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQT 247 W L+F I + +Q+ + + R + LP + +A+ +GWQG ++A ++ ++ + ++ Sbjct: 188 WCSLIFAIGVCVQIAIAPNMERLLLIFVFLPNVFMAYKFGWQGGVLAAVLGSLMITVTRQ 247 Query: 248 WRD---HPVDLLLSLLVQSLTGLLLGAGIQRLRELNQ-------SLQKELARNQHLAERL 297 +L L L Q+L GL LG I R ++L Q L++EL + L +RL Sbjct: 248 ASGAFHDLAELELFLSTQALLGLTLGIAISRQQQLAQHLHRYRNQLEQELQTRRKLMKRL 307 Query: 298 LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDA 357 + TEE VR+++ARELHD+IGQ ITAI+ QA +V R A A+ + Q I LS ++ Sbjct: 308 VRTEEDVRKEIARELHDEIGQNITAIQIQAMLVNRSAPSPAAQSAANQ-ISSLSQRIHQT 366 Query: 358 VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 R+LL +LRP LD++ L+QA+ L E +GI L++ + + TL+R+ Sbjct: 367 TRQLLRQLRPPVLDEMPLDQALHHLAEEFAFAEQGIHFQLDYALPAPPGEDVVVFTLYRL 426 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTAL 477 QE LNNI KHA+A + + D + L + DDG G+P G GL G+ ERV AL Sbjct: 427 VQELLNNINKHANARNIQVSLHLTDNIITLEVRDDGMGIPVQPQGGGLGLRGIEERVRAL 486 Query: 478 GGTLHISCLHGTRVSVSLP 496 GG + GTRV V+LP Sbjct: 487 GGDWLLQRRLGTRVVVNLP 505 >UniRef50_A5EZW7 Sensor protein UhpB n=35 Tax=Vibrionaceae RepID=A5EZW7_VIBC3 Length = 527 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 180/530 (33%), Positives = 277/530 (52%), Gaps = 52/530 (9%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGL-MLQCPRGYW--- 60 ++L +I F ++S + F LW++S +L P A LLFP GLRL + +L P W Sbjct: 1 MAKLFPLIFAFVLYSISQFSLWNVSQYLSHNPLQAYLLFPTGLRLAVYLLARPTYAWVWL 60 Query: 61 -------------------PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALIS 101 P++L W+ WL + H+P L + LL VAL+ Sbjct: 61 LSDMLLAGAILVLLPDQSSPLMLLMPWV--VWLAAVIARQHWPKLHLYWQKLLLIVALVL 118 Query: 102 RYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHY 161 + + L + P + + +LTGG+ L P + Y Sbjct: 119 LHT------------ILVGITFTLLAKPLHMEAETLITVSIASLTGGIVLTPFLYLVADY 166 Query: 162 LANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIA 221 L + TW PL P L+ + + + L+W LL F + L +L L +++ F + LP I Sbjct: 167 LRHQTWHPLSPQLIHHDVKLKPKMLMWSLLFFSLGLLAELTLLEQMKPFALLIILLPTIF 226 Query: 222 LAWHYGWQGALIATLMNAIALIASQTWRDHP---VDLLLSLLVQSLTGLLLGAGIQR--- 275 LA+ YGWQG ++A+ +N I L ++ + +LL+ + Q+ GL LG I R Sbjct: 227 LAYRYGWQGGVLASSLNCILLATARQFSGSFSSDQELLIFMSSQAFVGLGLGIAISRQHQ 286 Query: 276 ----LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 L+++N L KEL Q LA +L+ EE +R+ VARELHD+IGQ ITAI+ Q+ + + Sbjct: 287 LALLLQKMNTRLAKELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAIQIQSMLAE 346 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 RLA+ N KQ+ ++ L++ ++ + R+LL +LRP LD+L LE AIR L++EM + Sbjct: 347 RLAS-NDQAKQAASSVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLVQEMRFAEQ 405 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 G+ L ++ L + RVTL+R+ QE LNNI KHA A+ V + + E + L ++D Sbjct: 406 GMTVRLNMGVNPQKLDDTTRVTLYRIVQELLNNICKHAKATRVHISLFPGSEMV-LEVKD 464 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC---LHGTRVSVSLPQR 498 DG GLP +G GL G+ ERV+ALGG L ++ GTR+ V+LP + Sbjct: 465 DGIGLPTDWRVRGQGLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLPTK 514 >UniRef50_D2TKU9 Two-component system sensor histidine kinase n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TKU9_CITRO Length = 515 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 172/502 (34%), Positives = 270/502 (53%), Gaps = 19/502 (3%) Query: 11 VIACFFIFS--AAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEW 68 VI+ F + + W LW++ +L A L P G+ L L++ R YWP L+ Sbjct: 9 VISLFIVLAWGTGWLMLWTLGFYLTHNGQQAALFLPHGVYLALLILLARRYWPALVLPPM 68 Query: 69 LLIYWL-TQAVGLTHFPLLMIGSLLTLLPVALISRYR--HQRDWRTLLLQGAALTAAALL 125 L++ WL ++ + +L+ L++LLP ++ R+ W+ L L A+T A+LL Sbjct: 69 LMLLWLRSEQLLSGDLLVLLAAPLVSLLPASIAQRFWQRFPLYWQRLTLLLTAVTVASLL 128 Query: 126 QSLPWL-WHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGR 184 + + + L + TGG+ L P + + +L L P R Sbjct: 129 NTALLSPLLKSPAMLSGLASFTGGVLLTPFVYLIFEFLRQQHRYQLLAQDTQNP-PLRTS 187 Query: 185 HLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIA 244 ++W L F+I + QL L EL R + LP + +AW +GWQG ++A L+ ++ + Sbjct: 188 LIIWCSLFFIIGIGTQLTLSPELERLLLIVVFLPNVVMAWKFGWQGGVLAGLLGSMMITI 247 Query: 245 SQ---TWRDHPVDLLLSLLVQSLTGLLLGAGIQRLREL-------NQSLQKELARNQHLA 294 ++ + ++L + L Q+L G+ LG I R + L Q L+ ELA + L Sbjct: 248 ARQVGVGFSNLIELEIFLATQALLGMGLGIAISRQQHLAQNLHHYRQRLEAELAARRALT 307 Query: 295 ERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGV 354 E+L+ +EE R+ +ARELHD+IGQ ITAI+ Q +V+R A D A + + I L+ + Sbjct: 308 EKLIHSEEDTRKSLARELHDEIGQNITAIQIQTQLVKR-ARDPAQTQAAASQINDLARRI 366 Query: 355 YDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTL 414 + + R+LL +LRP LD+L+ +A+ L+ E RGI ++R+ + SE R TL Sbjct: 367 HHSTRQLLRQLRPPALDELSFNEALHHLLNEFAFAERGIRCRFDYRLTATPESETVRFTL 426 Query: 415 FRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERV 474 +R+ QE LNN+ KHA+AS V + QQ ERL L ++D+G+G+ G GFG+ GMRERV Sbjct: 427 YRLLQELLNNVCKHAEASEVAILLCQQGERLRLEVQDNGTGIGDGQLP-GFGIQGMRERV 485 Query: 475 TALGGTLHISCLHGTRVSVSLP 496 +ALGG L + HGTRV V+LP Sbjct: 486 SALGGELSLESRHGTRVIVNLP 507 >UniRef50_UPI0000E0F7AF sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=2 Tax=Proteobacteria RepID=UPI0000E0F7AF Length = 533 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 111/529 (20%), Positives = 211/529 (39%), Gaps = 80/529 (15%) Query: 23 FCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGA---------------- 66 F ++ S D A+ FP G L L P +WP L A Sbjct: 27 FSFFTASFGYSVVTDFAIWYFPLGFHFILFLVLPFKFWPTALIALGIGAGLTMYNQGSIY 86 Query: 67 -EWLLIYWLTQAVGLTHFPLLMIG-------------SLLTLLPVALISRYRHQRDWRTL 112 +WL + LT + + P++ I +++TL+ ++SR + Sbjct: 87 YDWLKHFLLTLTISIHTLPVVFIAQKMIQKLDIFSLKAIVTLVLFGMLSRLTN------- 139 Query: 113 LLQGAALTAAALLQSLP-------WLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANN 165 + L+ ++ +P +L H ++ +L+ ++ + F + + Sbjct: 140 -IGFHFLSNTSVYDKIPVNEKFGMFLQHNIAAYPGILMAIS---------VYFLYQWYRH 189 Query: 166 TWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWH 225 + L ++++ I +LLF IS+ Q L LPII + Sbjct: 190 STLKFTRNMLASTIRLAVALTTLIVLLFSISVTSQ--------NILQLVLILPIIWFGYR 241 Query: 226 YGWQGALIATL-MNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ---------- 274 Y W ++++ L +N + L+ + +V L+ AG+Q Sbjct: 242 YRWVASIVSALWINLVLLVLLYNTSPEQLVAFQPFIVCYFLIGLVTAGLQIDHNTIYESL 301 Query: 275 -----RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 +L+ L + + Q +A+ ++ +E +++V++ELHDD+GQ ITA+R + Sbjct: 302 QKHQTQLKFKYHELSQTKQQLQSMAKEIIAVQEIEKKNVSQELHDDVGQNITALRLAITM 361 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 +++ K S ++ ++ +Y L+ LRPR +DDL L + ++L Sbjct: 362 LEKNEKLTVQDKHSVHELKIMTDEIYSNAYDLMYWLRPRMVDDLGLSATLTGHFFSLKLT 421 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 I + L++ ++ +FR+ QE +NN+++H+ A+ + + L Sbjct: 422 QNNIEYSHQVSTSVDQLNDTIKIAIFRIVQECVNNVIEHSQATQCHINLHLYASIIKLEF 481 Query: 450 EDDGSGLPPGSGQQGF--GLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 D+G G Q GL + + AL G L +S G RV V LP Sbjct: 482 FDNGIGFNQNILDQPLRGGLFNIHNNMLALNGKLSLSNEEGARVYVELP 530 >UniRef50_UPI0001AEBEC0 2-keto-4-pentenoate hydratase, putative n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBEC0 Length = 521 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 119/524 (22%), Positives = 212/524 (40%), Gaps = 68/524 (12%) Query: 18 FSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQA 77 ++A + +W S P G+RL L P WP+LL AE + L Sbjct: 18 YTALFHGVWLFSTQFEIISGTVSWYLPAGVRLAAFLLLPIYSWPLLLIAEKSTHFILFHP 77 Query: 78 VGLTHFPLLMIGSL------LTLLPVALIS-----RYRHQRDW-----------RTLLLQ 115 G+ + G++ L L P + + R R + +L Sbjct: 78 GGILDNTAFLSGTIGWYLVHLVLSPAVICTCVYLFRRRFSAPYIDNVSSTLATLAFGVLI 137 Query: 116 GAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLV 175 AL A L + L G E + ++L + G + + L P +L Sbjct: 138 SVALGAVFLGRRAIELQTGIEVFLSILFDFSLGDFVGIVVLC-----------PFLFALY 186 Query: 176 SQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRF--------TPFCLALPIIALAWHYG 227 +P + HLV YL WL L + + F + P + L++ Y Sbjct: 187 KRP-SIPKSHLVLYLTTIA---WLVLLMLSSYAYFQQINISYQVKYLAVFPALFLSYRYA 242 Query: 228 WQGALIATLMNAI-ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ-------RLREL 279 G+ + L+ I A + + P++ +L + L+LGA I +L + Sbjct: 243 IVGSAFSCLLIGITAFVVASQSALPPIEHQFYILASCTSCLILGASINQSTLLNMKLAKK 302 Query: 280 NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS 339 N+ L+ + Q LA +L+ +E R+ ++R+LHDD G I ++ Q + R + ++ Sbjct: 303 NEDLEVSVQSAQALASQLVVVQEDERKRLSRDLHDDFGHRIVDLKLQLSLDSRESDNDMM 362 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 + + +Y A+++ LG LRP +D L +E I+ L+ I Sbjct: 363 LNK--------IDALYHAMKKSLGGLRPSGIDTLPIESVIQRSEIITTLKRANINYSFNV 414 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP- 458 +Q++ ++R+ QE + N +K+A+A+++++ + ++ DDG G+P Sbjct: 415 SGTPVPFDSDQKIHIYRIVQEAVTNSIKYANATSLSIDINYAQHSAVFIVTDDGGGIPEH 474 Query: 459 ----GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + + GL MRER + G IS GTRV ++LP Sbjct: 475 IAQLANAEPTLGLLSMRERAKLINGEFDISQNKPTGTRVCLTLP 518 >UniRef50_Q3IGR8 Sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IGR8_PSEHT Length = 533 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 127/528 (24%), Positives = 238/528 (45%), Gaps = 50/528 (9%) Query: 2 KTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWP 61 K + +L+ + F IF+A W +S +L P+ + + P G+++ L P YW Sbjct: 19 KQVTKQLLVGLVYFVIFAAT---FW-LSKNLETVPESSAIFIPAGIKIAFFLLLPTKYWL 74 Query: 62 VLLGAEWLLIYWL------TQAVGLTHFPLLMIGSLLTLLPVALI----SRYRHQRDWRT 111 L LL ++ A+ F L + SR+ + Sbjct: 75 TLWVTSRLLAAFVGAFNNEVLALAQWDFNLFHGFWQELCFVALIYILKNSRWPPSINDSQ 134 Query: 112 LLLQGAALTAAALLQSLPWLWHGKESWNALLLT-------------LTGGLTLAPICLVF 158 +L L A+ E N L+ T +TG L + P+ ++ Sbjct: 135 GILSLILLAVASTSIKWFVFASAFEFTNILVATELLQYQLNMCLGDITGTLLVTPLMMLI 194 Query: 159 WHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP 218 + +++ + + HL LL ++ + L + LP Sbjct: 195 FSVRHK----------LNKSLLLKMMHLGAALLCLLLIVIFVYALRPDTYPLLRLASLLP 244 Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHP---VDLLLSLLVQSLTGLLLGAGIQR 275 II ++ +G GA+ + + +I ++ P L +L ++T ++LGA I Sbjct: 245 IIWFSYRFGSLGAVTSATLINSLIILEASFTHAPENTYISQLFILANAITSMVLGAAITE 304 Query: 276 LRELNQSL-------QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L+ N L +K+L +N HLA +++ +E+ R+ +++ELHD++GQ +TA++T Sbjct: 305 LKRKNNELYKTNLELRKQLTKNTHLAAKMVSVQENERKHLSQELHDELGQNLTALKTDLS 364 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 I+ ++ N + + ++ + +YD+V +L+ LRPR+LD+L L +AI + + L Sbjct: 365 ILSHMS--NKDTQSFVKSLKTNANTMYDSVYQLMHYLRPRELDELGLNKAITAGRLKSLL 422 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I +++I + ALS++ + ++R+CQE + N VKH++AS + ++ + + L Sbjct: 423 HKAKINFQADFKIHK-ALSKDHEIAIYRICQEAVTNCVKHSNASKMHIELVTDNNFITLT 481 Query: 449 IEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 I D+GS P + +GL + ER ALGGT + +G + V LP Sbjct: 482 ISDNGSLATPANNSGNYGLAFIEERAMALGGTFEVCVKNGFTIKVKLP 529 >UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales RepID=B0K3K4_THEPX Length = 388 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 5/243 (2%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + S + L + L+++N L++ L + L+ +++E +E R+ +ARE+HD Q + Sbjct: 140 LVSQINVALNYLNRDLKKMNTQLEQ-LKDKRALSVKIIEAQEEERKRIAREIHDGPAQAM 198 Query: 321 TAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + +++ + ++L D K + ++ + VR+++ LRP LDDL L A+ Sbjct: 199 ANVLSKSELCEKLITKDIEQAKIELKNLKNIVQQSLKEVRKIIYDLRPSALDDLGLIPAL 258 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 ++ E GI D LS +T FRV QE L NI KH+ A +++ Sbjct: 259 SRYIKNFSEE-TGIFVDFSVLSDYKRLSPEIEITCFRVVQEALTNIKKHSKAKNASVKFE 317 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + ++I+DDG G + QG+GL GMRER+ L G IS GT++ +S+P Sbjct: 318 FGMRFISIIIKDDGIGFDKENIGQGYGLMGMRERIEILNGKFEISSFKNNGTQIYISIPV 377 Query: 498 RYV 500 R V Sbjct: 378 RGV 380 >UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FQ9_DECAR Length = 373 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 135/286 (47%), Gaps = 6/286 (2%) Query: 217 LPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLS----LLVQSLTGLLLGAG 272 +P+I L+ + + + A+ IA + + + + +Q + Sbjct: 83 IPVIFLSALRETEDKVRGFSLGAVDYIAKPFQPEEVLARVRTHIELRRLQCRLEERVAER 142 Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 ++LR+ + L+ R Q LA L E R +ARELHD++GQ +TA+R + R Sbjct: 143 TEQLRQSSDELRASRERLQELAAFLQSVREEERTAIARELHDELGQALTALRIDLAWINR 202 Query: 333 LAAD-NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 V+ + DAVRR+ LRP LD L L AI L+ + Sbjct: 203 QCKTLGPEVQARADASCAIVERTIDAVRRISEGLRPGMLDVLGLTAAIEYLVEQFAKRN- 261 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 I +L DE A+ + + +FR+ QE L N+V+HA A+ V + Q + + + I D Sbjct: 262 DIPCYLTSDRDEFAIDDRVSIAVFRLIQEALTNVVRHASATRVDITLSQDNNTICVDIRD 321 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQ 497 +G GL G +QGFGL GMRERVT LGGT+ I GTR+ P Sbjct: 322 NGIGLATGEPKQGFGLLGMRERVTMLGGTIDIDGSRGTRILARFPL 367 >UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRG0_SYNAS Length = 519 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 116/237 (48%), Gaps = 5/237 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 ++ I ++ + L++ + ++L+ L E R +ARE+HD++GQ++TA + Sbjct: 280 VVTYEDITERKKAEKELEESREKMRNLSIHLQSVREEERTRIAREIHDELGQSLTAFKMD 339 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 + + + + + L ++V R+ LRP LDDL L A+ +E Sbjct: 340 LSWLGKRMTSEKLLHDKIKAMSGLVDRTIESVHRISADLRPGLLDDLGLVAAMEWQAKEF 399 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 GI + ++ L + +FR+ QE L N+ +H++A+ V ++ + ++++ Sbjct: 400 SARS-GIACEADLEAEDVPLDKEPATAVFRIFQETLTNVARHSNATKVFVRLETKGDKVI 458 Query: 447 LVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQRY 499 L + D+G G+ + + FG+ GMRER GG + + S GT V VS+P + Sbjct: 459 LEVTDNGRGITQKQINDPKSFGIMGMRERALLWGGDVQVIGSRSRGTTVKVSIPLKS 515 >UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9GAMM Length = 525 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 124/476 (26%), Positives = 194/476 (40%), Gaps = 36/476 (7%) Query: 46 GLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRH 105 G+ L L++ R + PV+ +E L L L L + T L+ + Sbjct: 53 GVALSLVILGGRRWLPVIWFSELLGN-LLADLSQLLSIALAFSVVIETTSCHWLLVKRGR 111 Query: 106 QRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANN 165 D L+ AA + + S L G + PI ++F H+ + Sbjct: 112 FDDRLRRTQDFIDLSIAASIGTAIGGTSATVSILCL-----GQPSSLPILMIFVHWWQGD 166 Query: 166 T--WLPLGPSLV---SQPINWRG-----RHLVWYLLLFVISL-----WLQLGLPDELSRF 210 + + P ++ P W+G R L + L FV+ WL+ D + Sbjct: 167 VLGIILITPLILVWRDWPDYWQGQNRMARMLGLFALAFVVGQLTYLGWLEALFADHARAY 226 Query: 211 TPFCLALPIIALAWHYGWQGALIATLMNAIALIASQ-----TWRD-HPVDLLLSLLVQSL 264 F L I A A +G G L+ ++ A ++ T+RD D+ L++ ++ Sbjct: 227 WSF---LFITAAAVGFGRHGVLLIIVLTAGQVLFGHMRNVGTFRDSGLQDIWFFLVILTI 283 Query: 265 TGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 G+ L ++ L+ + L +R + E R +ARE+HD++GQ +TAI+ Sbjct: 284 VGVALAINVEERIRREADLRVSQRTLKALMQRNEQVREEERHHIAREIHDELGQVLTAIK 343 Query: 325 TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 A ++ R S + + QL G VR + LRP L L L A++ L Sbjct: 344 MHAALLTRTTPHAGSWRDDINHLLQLIDGGIKVVRNIALHLRPPILA-LGLVPALQWLTD 402 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 + E GIV L D S + E TLFR+ QE L NI +HA+A V ++ + ER Sbjct: 403 QF-AETHGIVCELATEGDTSGIQEPYLTTLFRLAQEALTNIARHAEAGKVWIKLTAEPER 461 Query: 445 LMLVIEDDGSGLPPGS---GQQGFGLTGMRERVTALGGTLHISC-LHGTRVSVSLP 496 + LV+ D+G G GL GM RV L G I GT + LP Sbjct: 462 ISLVVADNGHGFDVDEELKTGNSLGLNGMLHRVEMLDGEFEIHSNAEGTILLCHLP 517 >UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteriaceae RepID=B2VGC1_ERWT9 Length = 494 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 5/234 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 + +G I + + L+ R + LA + + E R+ +ARE+HD++GQ +T++R Sbjct: 250 MCVGRDITAIHYAEKKLEDSHMRLRLLARQREVSREEERKRIAREIHDELGQHLTSLRMG 309 Query: 327 AGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 +++ + + DN + + + L+ VR + RLRP LD + L A+ L E Sbjct: 310 ISMLRIQFSKDNPLLHERVVHLMGLTDKTIQVVRNVATRLRPNVLD-MGLTPALEWLRDE 368 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 G L E L + Q FRV QE L NI +HA AS V + + + Sbjct: 369 FISRHIGCCCRLITPEKEVRLGDEQATAAFRVAQESLTNISRHAQASEVIILLVRHAGSV 428 Query: 446 MLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 +L + D+G G +G+ FGL MRER LGG + I GT +S+++P Sbjct: 429 VLTVRDNGRGFDCQNGKDNAFGLMSMRERGRMLGGRVDIESKPSIGTCISLTIP 482 >UniRef50_C0N6H6 Histidine kinase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H6_9GAMM Length = 424 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 14/281 (4%) Query: 232 LIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLL-----------LGAGIQRLRELN 280 ++ L + L + P+D + L S TG L + + + Sbjct: 142 VMFFLAVNVLLYFAVARSLKPIDTITEALSDSETGQLDRRLPIFDLPEMANISHKFNLMA 201 Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV 340 +LQ + N L ++++ +E+ R+ +A +LHD+IGQ +TAI A + + + + Sbjct: 202 STLQGSINNNHRLTQQIIRLQEAERKKLAHDLHDEIGQHLTAIHVDASAI-KTSPNLDIA 260 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 K+S + I+++ + + VR +L +LRP LD+L A++ L+ + I ++ Sbjct: 261 KKSAEAIDEVVRRMMEIVRTMLHQLRPDGLDELGFVVALQELVNNWRERHQNIDVEADFN 320 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 D + E ++TL+RV QE L NI +H+ A V + + ++ + L I D+G G Sbjct: 321 GDFQRIDETVQLTLYRVMQECLTNISRHSRARQVWVSLTENEQAIKLEIADNGQGFDLQQ 380 Query: 461 GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 FGL GM+ERV ++ G I G + VS+P++ Sbjct: 381 HSYRFGLAGMKERVDSVHGEFVIKTALNEGVTIDVSIPKQG 421 >UniRef50_Q1H355 Sensor protein n=3 Tax=Methylophilaceae RepID=Q1H355_METFK Length = 466 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 9/291 (3%) Query: 211 TPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLG 270 +A+ +A+ W ++++ ++ R + L + L G+ Sbjct: 175 LLLLVAIFFVAVNALVYWAVGRAMRPVDSVMTALNELERGNLKARLPDFELPELAGIS-- 232 Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 ++ + ++L+ + N L ++L+ +E R+++AR+LHD+IGQ +TA+ A + Sbjct: 233 ---RKFNAMAETLETSIQNNHKLTQQLIRLQEDERKNLARDLHDEIGQYLTAVHVDASAI 289 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 A + K+S + I ++ + D V +L RLRP LD L A++ L+ + Sbjct: 290 LN-AKSIENAKESAKAISAVARQMMDIVHDMLQRLRPSGLDAFGLSTALKDLVSTWKQRN 348 Query: 391 RGIVSHLEWRIDESAL-SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 + + H++ + E + ++R+ QE L N+ +H++AS V ++ + L + + Sbjct: 349 QQVDVHVDIPGRLDDIRDETTAIAVYRIVQECLTNVTRHSNASRVDIRITIEKTMLNITV 408 Query: 450 EDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQR 498 ED+G G GFGL GMRERV LGG + GTRV+V LP + Sbjct: 409 EDNGRGFNTAQLPSGFGLAGMRERVEGLGGRFSLDSALAAGTRVNVELPLQ 459 >UniRef50_Q0KDJ4 Signal transduction histidine kinase containing PAS/PAC sensor domain n=3 Tax=Burkholderiales RepID=Q0KDJ4_RALEH Length = 355 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 8/235 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I + Q L + A+ + L+ L E+ R ++RELHD++GQ++TA+R Sbjct: 113 ISRDITDRKRSEQELLESRAQLRELSAYLQSVREAERTRISRELHDELGQSLTALRLGLS 172 Query: 329 IVQRLAADNA--SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 ++ +A + ++ Q+++Q++ DAV+R+ LRP LD+L L AI L Sbjct: 173 FIEAQQGPDAGDACRKHLQMLKQIADSTVDAVQRIAADLRPPLLDELGLTAAIEWLAESF 232 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 G GI L + LS +FR+ QE L N +H A V ++ L Sbjct: 233 SERG-GIACELALQ-PVGELSAELSTAVFRIAQEALTNACRHGRADRVRVELSAAGGTLR 290 Query: 447 LVIEDDGSGLPPGSG--QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 LV+ D+G G+ ++ GL GMRER LGG L ++ GTRV +P Sbjct: 291 LVVADNGRGIDASRAGHRRSLGLLGMRERALMLGGKLAVTSEKGGGTRVEAQIPN 345 >UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX1_CLOTH Length = 392 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 75/251 (29%), Positives = 122/251 (48%), Gaps = 20/251 (7%) Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 + + + LTG L +Q +++ + + L R+++ +E R+ VARE+HD Sbjct: 143 IGISLSYLTGDLENVSLQI---------EDMKQRRLLGIRIIKAQEEERQRVAREIHDGP 193 Query: 317 GQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 Q+++ I +A I +RL +D K + ++ + VR+++ LRP LDDL L Sbjct: 194 AQSMSNIVLKAEICERLVDSDPEKAKDELRTLKSVVRDTLRDVRKIIYDLRPMSLDDLGL 253 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 ++ + E GI + R L +T+FR+ QE +NNI KHA A VT Sbjct: 254 IPTLQRYIETCREES-GIKITFKTRGTCEQLKPVVSLTVFRLVQEAVNNIKKHARADKVT 312 Query: 436 LQGWQQDERLMLVIEDDGSGLPPGSGQ-------QGFGLTGMRERVTALGGTLHISCL-- 486 + ++ L L I D+G G S + +GFGL MRERV L G I Sbjct: 313 INLEFLEKELKLYIADNGVGFDFDSLKSNEEDINKGFGLISMRERVELLDGKFEIDSAVG 372 Query: 487 HGTRVSVSLPQ 497 GTR+++++P Sbjct: 373 KGTRLNITVPL 383 >UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TAX2_BURPP Length = 748 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 6/235 (2%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 L + I E+ L++ A Q L E R+ +ARE+HD++GQ +TA+R Sbjct: 511 ALTIWTDITERMEVELRLRESYALLQELTSLRETAREEERKRIAREMHDELGQQLTALRL 570 Query: 326 QAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 ++ A D+ ++ + + L+ VR ++ LRP +D + A+ L Sbjct: 571 GVSAMRIEFAQDDPALAGRFRDLLALADDTMQVVRNVVASLRPAAID-AGIVAALEWLAA 629 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E +GR + HL D L E + + LFR+ QE L N+ +HA A+ VT+ Q Sbjct: 630 EFSRDGR-VACHLRIPDDNLVLDEARAIALFRIVQEALTNVARHAAATQVTISLEQTGRC 688 Query: 445 LMLVIEDDGSGLP-PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 +L I DDG G + + FGL GMRERV LGG + + GT ++V +P Sbjct: 689 WVLEISDDGCGFDSMAARMKSFGLVGMRERVLMLGGEISVCSAPGSGTSITVCIP 743 >UniRef50_Q1H352 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H352_METFK Length = 466 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 118/231 (51%), Gaps = 7/231 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 A I + L L NQ LA ++ +E RR++ARE+HD++GQ +TAIR + + Sbjct: 227 ADITEQHLAERELAVLLKENQALARHAMQVQEEERRNIAREIHDEMGQYLTAIRLELASL 286 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + ++ + + I + AVR L+ RLRP LD L +AI L+ E + + Sbjct: 287 PK--EGHSFIGEFSARINSHVEHIQQAVRGLIHRLRPTALDAHGLAEAIEQLVNEWKRQH 344 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD----ERLM 446 I L +L E + +R+ QE L NI +HA A+ V ++ + + L Sbjct: 345 PAIECQLMLDKHYPSLPEKTSIVAYRIVQESLTNIARHAYANRVAIRLIRTHGILSDILT 404 Query: 447 LVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC-LHGTRVSVSLP 496 + ++DDG G P + GFGL+GMRERV A GGT +I G +S +LP Sbjct: 405 VEVQDDGVGFNPHLPRAGFGLSGMRERVEAEGGTFNIRSERKGVVISATLP 455 >UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47G83_DECAR Length = 683 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 86/284 (30%), Positives = 128/284 (45%), Gaps = 13/284 (4%) Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 WQ L+ ++L+ D + + LSL ++ G L I R Q + Sbjct: 402 REAWQSPSDLALLGIVSLVRD----DQDIPVELSLSSTTVRGERLVTAIFRDLSERQRTE 457 Query: 285 KEL----ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNAS 339 EL + Q L L E R ++RELHD++GQ +T +R + + RL Sbjct: 458 LELLKSNRQLQELTASLESVREQERLRISRELHDELGQALTGLRMEISWLGGRLLTTQPE 517 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 ++Q I++L G +VRR+ LRP LDDL A + + + LE Sbjct: 518 LEQKVVSIKKLIDGTIKSVRRISSELRPLVLDDLGFAAAANWYVDQFATR-TNLKVTLEL 576 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG 459 D+ TLFRV QE L N+ +HA A V ++ Q +++ L I DDG G Sbjct: 577 PNDDPENGGTVATTLFRVLQESLTNVARHAGARNVDIRLLQANDQWRLEIRDDGQGFDQS 636 Query: 460 SGQ-QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRYV 500 S + G GL GMRERV ALGG+ ++ GT + + +P Sbjct: 637 SAKMGGIGLIGMRERVQALGGSFELTAAPGQGTLIEICIPVESA 680 >UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinase n=24 Tax=Burkholderia RepID=C5AIA0_BURGB Length = 769 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 17/312 (5%) Query: 202 GLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALI-ASQTWRDHPVDLLLSLL 260 + L+RF P + +G G L + L + P++ +S + Sbjct: 450 AIGAPLTRFIPQRFRHAHASHIARFGVTGQSERHLGSQRLLYGLRANGDEFPIEASISQI 509 Query: 261 VQSLTGL--LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQ 318 L ++ + + +L+ + L+ L E + +ARELHDD+GQ Sbjct: 510 HDGDGKLYTVMMRDVTERVQAENALKASREELRELSANLQRVREEEKTRIARELHDDLGQ 569 Query: 319 TITAIRTQAGIVQ-RLAAD-----NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD 372 +TA++ V+ RL D +ASV + + + +L +VRR+ LRP LDD Sbjct: 570 QLTALKMDLSAVEHRLLRDGTGEAHASVVEPLREMRRLIDATVASVRRIAADLRPVMLDD 629 Query: 373 LTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 L L AI L + GI + LFR+ QE L N+ +HA+AS Sbjct: 630 LGLVPAIEWLANDFTNR-YGIEVERRIDPGDVRFPNATATALFRIVQEALTNVARHAEAS 688 Query: 433 AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ-----GFGLTGMRERVTALGGTLHISCL- 486 V L +D + +L I DDG G G++ FGL G+RER LGGT+ + Sbjct: 689 HVALTLGIEDRQCVLRIVDDGVGADQADGRRAPDDKSFGLLGIRERAHMLGGTVRMETAR 748 Query: 487 -HGTRVSVSLPQ 497 G +++++P Sbjct: 749 NQGYALTITIPL 760 >UniRef50_C6XAP9 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAP9_METSD Length = 446 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 2/231 (0%) Query: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 + A I ++ + L N L + LE +E RR +AR+LHDD+GQ + AI+ A Sbjct: 208 VFAADITEIKTAESEISNLLRENHFLLRQALELQEEERRHIARDLHDDMGQYLNAIKANA 267 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + + S+ + I S +Y + R+L+ RLRP LD+L L A++ L+ + Sbjct: 268 TSLVNMPDLPPSISEVALHIISHSDHIYRSARQLIHRLRPAALDELGLGAALQHLIDTWK 327 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 G L L + + ++RV QE + N +HA AS + + + Q +RL++ Sbjct: 328 YPANGTRYQLAIDDALDHLDDKLTINIYRVIQEAITNAARHAQASLIDVHLFMQGDRLIV 387 Query: 448 VIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 I DDG G+ +G GL GMRER+ A+ G +S GTR+ +P Sbjct: 388 DITDDGCGISQAQPHKGLGLAGMRERIKAVDGKFEVSSAAGTGTRIRAVIP 438 >UniRef50_B0P062 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P062_9CLOT Length = 440 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 90/393 (22%), Positives = 179/393 (45%), Gaps = 33/393 (8%) Query: 118 ALTAAALLQSLPWL---WHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSL 174 A LL + + ++ + +L L L I V+ +Y N L + + Sbjct: 64 IFIAFFLLLGIIEIRRKQRKRQQVSVILYAAEILLCLIIIKFVYVNY--NGIILLVIADI 121 Query: 175 VS--QPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGAL 232 V+ + + RG V ++++ S + + + ++ F F P G + L Sbjct: 122 VTDIKDKHTRGIFFVIMGMIYLFSDYDIISMFIDMISFQQFLSVYPAKVSMMIQGTRNIL 181 Query: 233 IATLMNAIALIASQT------WRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKE 286 +A +NAIA IA +++ LL+L +Q+ RL+E+N+ L+ Sbjct: 182 VA--LNAIAFIAYMIILMRNQMKENARIGLLNLQLQTANI--------RLKEMNEQLKD- 230 Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI-VQRLAADNASVKQSGQ 345 + E++ ET E R +ARE+HD +G T+T + + + + K+ Sbjct: 231 ---YSEMTEKMAETRE--RNRIAREIHDTLGHTMTGLSAGIDACIAMIDFSVDATKEQLN 285 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 I Q++ +RR + +LRP L+ L++A+ ++ E ++ + + + +++ Sbjct: 286 KISQVARQGIKDIRRSVNKLRPDALEHSGLQEALEKMINET-MQVSDVKINYDCQVEVLK 344 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGF 465 ++++ ++RV QE + N ++H A + + W++D+ L L I+D+G G GF Sbjct: 345 FNQDEEDMIYRVVQESITNAIRHGKAKQIDVNLWKEDKWLNLEIKDNGIGC--EEIHTGF 402 Query: 466 GLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 GL + ER+ L GT+ +G +V+ +P R Sbjct: 403 GLIHIEERIKMLKGTVEYDGSNGFKVTARIPIR 435 >UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3_HALOH Length = 391 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 17/289 (5%) Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLL-----------VQSLTGLLLGAGI 273 Y +Q A ++ A+ + + +L L+ + S G++ + Sbjct: 91 KYAYQQAEDTSVQIAVLREKEEQLKKRRAELENRLINLKRNIEKAENMVSRVGVVHDYLL 150 Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 L L++ +L + Q LA ++++ +E R+ VARE+HD Q+I + + + Q+L Sbjct: 151 GELSNLSEQF-DDLRQKQQLAIKIIQAQEDERKRVAREIHDGPAQSIANLVFRVELAQKL 209 Query: 334 A-ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 D + + +++L VR+++ LRP LDDL L +R + + E Sbjct: 210 MDKDLKKARNELEDVKELVRLSMQEVRKIIYDLRPMSLDDLGLIPTLRRYINKFN-EQTK 268 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I+ + L +T+FR+ QEGLNNI KH+ AS T+ E++ ++I DD Sbjct: 269 IIIDFNILGPKRRLPNTYEITIFRLIQEGLNNIYKHSKASTGTVTLEYTPEQINILISDD 328 Query: 453 GSGLPPGS-GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 G G P G FGL MRER LGG L + GT++ ++LP + Sbjct: 329 GIGFKPEEVGANKFGLVSMRERCELLGGKLDLFSEKNKGTKIKITLPIK 377 >UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJS5_BREBN Length = 365 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 12/260 (4%) Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQ-HLAERLLETE 301 + +++ D+PV + L G L+ LR+++ + E R Q L ++ + Sbjct: 96 LRTKSGVDYPVAASSARLEDESQGKLVMI----LRDMSAQQRVEKERYQYKLTNFAIQAQ 151 Query: 302 ESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRL 361 E R+ +ARELHD +GQ + +I +V++ ++ +L+ ++ + V+R+ Sbjct: 152 EEERKRIARELHDGVGQALYSILVGLNVVRQRELSEPVMQHVAELV-NMTSKAMEEVKRM 210 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 LRP LDDL L A+RSLM+ +E I L + ++ S L+R+ QE Sbjct: 211 ALELRPSALDDLGLLPALRSLMKRVEKTFH-IQVELHVQGEKRRYSAAMETALYRIVQEA 269 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG---QQGFGLTGMRERVTALG 478 + N K+A AS + + +++ +++ I DDG G +G G+ GM+ER LG Sbjct: 270 MTNTAKYAKASHLGIMFENREKEIVVTIVDDGVGFEVEKTLKIGKGLGVFGMKERAQLLG 329 Query: 479 GTLHISCLH--GTRVSVSLP 496 GT+ I GT V V +P Sbjct: 330 GTVDIRSAPEEGTTVIVRIP 349 >UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE1_9BACI Length = 633 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 10/237 (4%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 LG I+ EL ++K+ Q L E++L +E R+ +ARELHD G +++I Sbjct: 383 LGTVIEN-NELTHEIKKKEEIRQMLLEKILTVQEDERKRIARELHDQTGHALSSILLGLK 441 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +++ A V + + + +L+ + + L +LRP LD L+ AI +++ + Sbjct: 442 MLED-AKTPEEVTKQIEALRKLTHQSIEDIHDLAWQLRPTILDKFGLKTAIERYIQDFQQ 500 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + L ID L+ +FR+ QE L NI K+A+A++V++ + + + ++ Sbjct: 501 KLDIDYDVLIKGIDTIRLTPEMETAIFRIVQESLTNIFKYAEANSVSVILLRNHDMISVI 560 Query: 449 IEDDGSGLPP------GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 IEDDG G + GL GM+ER + LGGT I GT + V LP Sbjct: 561 IEDDGVGFDVEKMMNKDPSKFNLGLHGMQERTSLLGGTFEIESEKGRGTAIMVKLPM 617 >UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSJ3_9BACT Length = 795 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 112/250 (44%), Gaps = 11/250 (4%) Query: 258 SLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIG 317 SL S G+ I ++ L K + LA L E R+ + RE+HD++G Sbjct: 521 SLGEGSNEGVCFVVDITERKQAEVELTKSREELRALAAHLQFIREEERKHITREIHDELG 580 Query: 318 QTITAIRTQAGIVQRLAADNASVKQSGQLIE------QLSLGVYDAVRRLLGRLRPRQLD 371 Q++T + ++ S QLI+ +L + VRRL LRP LD Sbjct: 581 QSLTGFKMDLAWMRARLLGEDSKASRQQLIDKIENMARLIDETANVVRRLCTELRPGVLD 640 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 DL L AI +RE + GI E + + + LFR+ QE + N +HA A Sbjct: 641 DLGLTAAIEWQIREYQNR-TGIRCSTEIESGDLGVDAERSTALFRIFQELMTNTARHAQA 699 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGGTLHIS--CLH 487 S V + + ++L + D+G G+ +G + GL GMRER LGG L I+ Sbjct: 700 SRVEVSLKRIGSEIVLEVRDNGRGIKENEKAGTKSLGLVGMRERALVLGGELEIAGKPGR 759 Query: 488 GTRVSVSLPQ 497 GT V V +P Sbjct: 760 GTMVRVRVPL 769 >UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG9_SYMTH Length = 558 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 120/242 (49%), Gaps = 5/242 (2%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + + G +G I R R L L ++ L RL+ +E RR +ARELHD+IGQ + Sbjct: 294 ILTALGEQIGLAIDRAR-LYDQLAEKERLRGRLLARLITAQEDERRRIARELHDEIGQAL 352 Query: 321 TAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 TA+ + R ++Q +++++ VRR++ +RP LDDL LE AIR Sbjct: 353 TALVVTLDFLVRHPLSEEMLRQRLVAVKEMAETGLTEVRRVIHEMRPTALDDLGLEAAIR 412 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 L+R E G I +E E L + +T+FR+ QE N VKHA AS + + Sbjct: 413 WLVRRYEDAGLKIDVQIE--GLEERLPDYIEITVFRLIQEACTNTVKHAAASHIRIALRH 470 Query: 441 QDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 + L + + DDG G +G GLTG+RERV+ GG L I GTRV LP Sbjct: 471 RGNWLTVEVTDDGKGFDIKRRGEGVGLTGIRERVSLAGGKLTIESGPDSGTRVYAELPVE 530 Query: 499 YV 500 Sbjct: 531 GA 532 >UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H4_9GAMM Length = 570 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 14/262 (5%) Query: 250 DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQH-----LAERLLETEESV 304 VDLLLS + S + I LR++ + Q E ARNQ LA+ + E +E+ Sbjct: 303 GSQVDLLLSTVPLSDNEDRVIGLICTLRDITELKQAEAARNQLRETRLLAKHMDEAQEAE 362 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 RR +ARELHD++GQ +TAI+T A +++ R V S Q I + +YD V ++ Sbjct: 363 RRHLARELHDELGQCLTAIKTDAVLIRNRTETTEPRVFNSAQAIIDTASHIYDVVHNMIT 422 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 RLRP LDDL L + + + I L+ + L+E +T+FRV QE + Sbjct: 423 RLRPSPLDDLGLVPTLEQCIASWQSRETTINFQLDVNGTLNNLNEIMNMTVFRVVQEAIT 482 Query: 424 NIVKHADASAVTLQGWQ----QDERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTAL 477 N V+HADAS + ++ +D++L++ I+D+G G+ FGL GMRER +L Sbjct: 483 NAVRHADASEIKVKVSAEQGSEDDKLIIDIQDNGKGMVVKDFHSDVDFGLLGMRERAQSL 542 Query: 478 GGTLHISCLHGTRVS--VSLPQ 497 GG ++ G V +++P Sbjct: 543 GGKFELNSEPGAGVRILITIPL 564 >UniRef50_B6JD37 Signal transduction histidine kinase containing PAS/PAC sensor domain n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD37_OLICO Length = 358 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 6/235 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I + L + + L+ L E R +ARELHD++GQT+TA++ Sbjct: 115 ISRDISERKAAEDELVASRTQLRALSHYLQTVREEERAHIARELHDELGQTLTAMKMDLV 174 Query: 329 IVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++ RL+ADN ++K + + L+ ++R+ LRP LD+L L A+ L + Sbjct: 175 WLRERLSADNGALKPRVERLVGLADRSVTDLQRIASDLRPLMLDELGLVSAVHWLTDTVA 234 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + +L + ++ FR+ QE L NIV+H+ A VT+ ++ L + Sbjct: 235 GQS-NLNINLSFDREDLTYGPEVSTAAFRIVQEALTNIVRHSGARHVTITACHAEDELHI 293 Query: 448 VIEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 I DDG GLPP S + GL GM ER LGG++ + GTRV SLP + Sbjct: 294 EIVDDGCGLPPTAASPRLHHGLLGMHERANMLGGSVAVESAPGGGTRVRASLPLK 348 >UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR1_THEYD Length = 726 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 71/234 (30%), Positives = 130/234 (55%), Gaps = 6/234 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 +G I +++ + L+K + L+ L E+ R+++A+E+HD++GQ++TA++ Sbjct: 492 IGRDITYRKQIEEELRKSREALRKLSVYLQNIRENERKEIAKEIHDELGQSLTALKLSLS 551 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +++ D K+ + + + + V+ + RLRP +D LTLE AI ++E E Sbjct: 552 WIKKRVEDEFLNKKFDETL-TIVNALIKQVQNISNRLRPSLIDYLTLEDAIMWQVKEFE- 609 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 IV +++ LS+N +TLFR+ QE L NI +HA+A+ V ++ ++ + ++L+ Sbjct: 610 RNTSIVCNVDIAEHGIKLSKNVSLTLFRIFQEALTNIARHANATEVDIKMFRSEASILLI 669 Query: 449 IEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQR 498 I+D+G G+ + FGL MRER ++ TL I S GT + +S+P R Sbjct: 670 IKDNGIGISDEKIKSPESFGLMAMRERAYSINATLDIHRSYEGGTEIIISVPVR 723 >UniRef50_C0N6J6 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6J6_9GAMM Length = 479 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 5/229 (2%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 R + L K +A N LA +L +ES RRD+ARELHD++ + IR G ++RLA Sbjct: 216 RFNHMASVLDKTMAENHALAGNMLSLQESERRDLARELHDELAPCLFGIRVDLGEIERLA 275 Query: 335 ADNA--SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 + ++ ++ ++ + VR++L RLRP LDDL L +A+R ++ Sbjct: 276 GERQITEIEDKVGSVKTITTHIQSLVRKMLSRLRPMTLDDLGLAEALRDMLHNWRDRQPE 335 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I ++ D L + +VT++RV QE N V+HA AS V ++ +++E + + + DD Sbjct: 336 IDWEWDFVGDFYDLPDTLQVTVYRVVQECTTNCVRHAKASHVKVEVRREEETIKVAVTDD 395 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVS--LPQRY 499 G GL + +GFGL GMRERV+ALGG + G + V +P + Sbjct: 396 GKGLD-ANLVRGFGLIGMRERVSALGGRIAFDTEEGLGLQVRVLIPLKG 443 >UniRef50_Q39TN6 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN6_GEOMG Length = 439 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 10/230 (4%) Query: 277 RELNQSLQKE-----LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 RE+ +S ++E L + + L+ L+ E R VARE+H+++GQ + A++ +V Sbjct: 196 REIERSKREEGLVDSLKKQRRLSFHLMSAREEERTAVAREIHEELGQMLAALQLNVSLVT 255 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 + D+A + Q +EQL V R+ LRP LD L L AI +E E + Sbjct: 256 KEYLDHAKLVARTQAMEQLITSSIMTVNRISSELRPVMLDILGLADAIEWQAKEFEKKS- 314 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 GI + E + + ++R+ QE L+N+ +HA A V + ++ R+ L + D Sbjct: 315 GIRCKTTILLAEKKVDRDVSTAVYRIVQEALSNVARHATADHVRVTLVEKVGRVTLSVSD 374 Query: 452 DGSGLP--PGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQ 497 +G G+ + Q G+ GMRER A GG L I S GT V +P Sbjct: 375 NGRGITEREKNNPQSLGIAGMRERAEAFGGRLRICGSSRQGTTVVARIPL 424 >UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinase n=10 Tax=Burkholderia RepID=B2T8J5_BURPP Length = 553 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 6/229 (2%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 I + + Q L + + + L+ + E R+ +A E+HD++GQ +TA++ +++ Sbjct: 315 ITSRKRIEQELFESRNQLRELSAYMEAIREEERKRIAMEIHDELGQLLTALKMDVSLLKM 374 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 + + + +L V + LRP L + + A+ L+ + + G Sbjct: 375 RLGKDPDAMRKADDMRELVEKTIWMVCNVANHLRPVAL-NFGVVSALEWLVEDF-IRRHG 432 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I L E L E +FR+ Q L N+ +HA A+ + L L + DD Sbjct: 433 IPCQLHINGGEPVLPEACATAVFRIVQASLTNVGRHAHATRADVTLTSTAAALDLHVSDD 492 Query: 453 GSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G G PG + G +GL GM+ER +GG + I GT +S+ +P Sbjct: 493 GCGFDPGMARTGYSYGLLGMQERARLIGGAMTIDSAQGMGTAISIHIPL 541 >UniRef50_B4UAL2 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Anaeromyxobacter RepID=B4UAL2_ANASK Length = 662 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 10/245 (4%) Query: 259 LLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQ 318 V + + L E L L +L+ +E R+ +ARELHD+ Q Sbjct: 397 ARVNAELEQRVEERTHALNEAYAQLAAREEARAQLLRKLISAQEDERKRIARELHDETSQ 456 Query: 319 TITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQA 378 ++ + Q + + + ++ +++ + V R++ LRP LDDL L A Sbjct: 457 SLAVLAMGLEAAQDAMRGGKAPR--LEEVKAVAVRTLEDVHRIILDLRPSVLDDLGLLSA 514 Query: 379 IRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 IR +L RG+ E+ + L LFR+CQE ++NI +HA A+AV ++ Sbjct: 515 IRWYAER-QLGTRGMSVRCEFGELDRRLPPEMETALFRICQEAMSNIARHAQATAVLVEV 573 Query: 439 WQQDERLMLVIEDDGSGLPPGS-----GQQGFGLTGMRERVTALGGTLHISCLH--GTRV 491 +D+ + IEDDG G + G++ +GL G+RER LGG+ + GTRV Sbjct: 574 ALEDDVFRIDIEDDGRGFDAEAVARREGRRSWGLMGIRERAEILGGSATVESAPGKGTRV 633 Query: 492 SVSLP 496 V +P Sbjct: 634 EVRIP 638 >UniRef50_Q0B944 Multi-sensor signal transduction histidine kinase n=29 Tax=Burkholderiaceae RepID=Q0B944_BURCM Length = 707 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 15/318 (4%) Query: 194 VISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLM-NAIALIASQTWRDHP 252 V + + LSRF P +G G + + + P Sbjct: 381 VFGVSAMEAIGAPLSRFIPERFRAAHAKHVDQFGVTGVSERQMGRQRVLFGLRGNGEEFP 440 Query: 253 VDLLLSLLVQSLTGL--LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAR 310 ++ +S + + L ++ I + +L++ + L+ L E + +AR Sbjct: 441 IEASISQIRDASGKLYTVMLRDITERQRAENALKQSREELRELSANLQNVREEEKTRIAR 500 Query: 311 ELHDDIGQTITAIRTQAGIVQRLAADNASVKQ------SGQLIEQLSLGVYDAVRRLLGR 364 ELHDD+GQ +TA++ ++++ + Q + +L +VRR+ Sbjct: 501 ELHDDLGQQLTALKMDLSVIEQQLRAPGRAQPNDDVLSHLQGMRRLIDATVASVRRIAAD 560 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 LRP LDDL L AI L + GI + TLFR+ QE L N Sbjct: 561 LRPVMLDDLGLVPAIEWLANDFTNR-YGIDVERHIETGGLTFTSAGATTLFRIVQEALTN 619 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG---QQGFGLTGMRERVTALGGTL 481 + +HADA+ V L+ ++ +L + D+G G PG + FGL G+RER LGG + Sbjct: 620 VARHADATRVALRLDIEEGFCVLRVADNGRGAAPGGSAHEDKSFGLIGIRERAHMLGGNV 679 Query: 482 HISC--LHGTRVSVSLPQ 497 I G ++V+ P Sbjct: 680 TIDTALARGFSITVAFPL 697 >UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinase n=2 Tax=Methylophilaceae RepID=Q1H0K4_METFK Length = 573 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 88/298 (29%), Positives = 149/298 (50%), Gaps = 17/298 (5%) Query: 218 PIIALAWHYGWQGALIATLMNAIALI----ASQTWRDH---PVDLLLSLLVQSLTGLLLG 270 ++ H G Q A M+A L+ + RD V L ++ L+ +G L+G Sbjct: 273 ALLMPPGHEGEQERSSAASMSANGLVEHYDTQRVARDGKLLDVSLSIAPLMDPKSGELIG 332 Query: 271 AGIQRL----RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 R+L + ++L N+ L + E RR +ARELHD++GQ +TAI+T Sbjct: 333 EICSMRDITERKLAEETARKLEENRQLTHLIQRHIEDERRSLARELHDELGQYVTAIKTF 392 Query: 327 A-GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 A I + + S++ S Q I + +YD + ++ LRP LD+L L +A+R + Sbjct: 393 AVAIANKAKQEMPSIESSAQTIVSAANHIYDGMHNIIRHLRPGSLDNLGLSEALRDAVAG 452 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD-ER 444 + + + +LE + L E+ + L+R+ QE + N ++HA A + ++ + + Sbjct: 453 WQAQNSNVTFNLELQGKLDLLGESLNINLYRIVQESVTNALRHAQADRIDIRLSRDENGN 512 Query: 445 LMLVIEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 L L+I+D+G G+ + FGL GMRERV AL G I GT ++V++P+R Sbjct: 513 LTLLIKDNGIGMNMCNVDQNRHFGLLGMRERVQALYGNFAIDSQPGQGTAITVTIPER 570 >UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kinase n=11 Tax=Enterobacteriaceae RepID=C6CGT0_DICZE Length = 546 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 6/235 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L +G I +R + L+ + + LA + + E R+ +ARE+HD++GQ +T++R Sbjct: 311 LTVGRDITAIRYAEKKLEDSHMQLRLLARQREISREEERKHIAREIHDELGQHLTSMRMS 370 Query: 327 AGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 +++ + A DN + Q + LS VR + RLRP LD + L A+ L + Sbjct: 371 LSLMRMQFARDNPHMLTQLQNLMALSDKTIQVVRHVATRLRPNVLD-MGLTPALEWLRDD 429 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 + R L E L++ FRV QE L NI +HA+A+ V + ++ + Sbjct: 430 FIRQYR-CPCLLHAPEPEVVLNDECATAAFRVVQESLTNIARHAEATQVVISLENREGLI 488 Query: 446 MLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +L + D+G G + + FGL M+ER LGG + I GT V ++ PQ Sbjct: 489 VLSVHDNGKGFDAQTRKPNAFGLMSMKERGRMLGGEVVIESQPGAGTLVRLTFPQ 543 >UniRef50_B2A6W3 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W3_NATTJ Length = 490 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 38/304 (12%) Query: 228 WQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGA---------------- 271 W LI +++ I +P+ L+S Q G L G Sbjct: 172 WLTVLIVSIVGLITAYLLSLIIINPIYRLVSATEQVAKGHLHGIPLVVTNDEIGKLSLSF 231 Query: 272 -----GIQRLRELNQS----LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITA 322 G++ LRE N+S L+K+ + L +++ +E R+ ++RELHD GQ++T Sbjct: 232 KKMIEGLKSLRENNESCWVQLEKKEEMRKKLLNKMMSAQEEERKKISRELHDGTGQSLTT 291 Query: 323 IRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 ++ + D K+ + + +L+ V D ++ L LRP LDDL L+ A+ Sbjct: 292 LKLALKQISE-TNDLEEAKRMSEELRELTGDVIDEIKSLARDLRPSVLDDLGLDYALEKY 350 Query: 383 MREMELEGRGIVSHLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 ++E++ G+ + ++ D+ L ++R+ QE +NN +KHADAS + + Sbjct: 351 LKEIQGR-TGVSTEFWFQADQGLKLEPEISTNIYRIVQESVNNSIKHADASKIDVIVKTI 409 Query: 442 DERLMLVIEDDGSGLP--------PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRV 491 +L+++IEDDG G + +G G+ GM ER +GG L I GT V Sbjct: 410 SSQLIVIIEDDGKGFDLEQFSDNYKQNETRGLGIFGMEERAELIGGHLAIESTPGDGTAV 469 Query: 492 SVSL 495 + + Sbjct: 470 YLKI 473 >UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7S2_9PROT Length = 647 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 7/233 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + + + + + L + L+ L E R +ARE+HD++GQ +TA+R Sbjct: 415 VAVNVTESKGIEEKLLHSQQMLRELSAHLENIREDEHRHIAREIHDELGQALTALRMDVS 474 Query: 329 IVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 +V+ N + Q + Q D VR + LRP LD + + A+ L E Sbjct: 475 LVRLNFGEANPQLLTHLQSMSQRVQRTVDIVRHITSSLRPGALD-MGIVAALEWLAEEFT 533 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 I L AL E +FR+ QE L NI +HA A+ V + + ++ L Sbjct: 534 G-YTQIQCELALNDGNIALDEFSATAVFRIVQESLTNIARHAQATQVEVIVTRSEDELCF 592 Query: 448 VIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + D+G+G PG+ + + FGL G+RERV L G I GT + V +P Sbjct: 593 EVCDNGTGFDPGAIENCKSFGLIGIRERVAMLSGHFEIESRQGAGTCLRVHIP 645 >UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6SXZ6_JANMA Length = 490 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 9/237 (3%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G++ +L + + + + A+ L+E + +E R +ARE+HDD+G +TAI+ Sbjct: 242 GIMTNITASKLEQ--EEIIRSRAQLAELSEHVNTVKEKERTRIAREIHDDLGGNLTAIKM 299 Query: 326 QAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 ++ +RL ++ + + +E L + V R+ G LRP LD L AI + Sbjct: 300 ALALLTRRLPGKSSELLEKAAYVESLVDRTIETVHRIAGDLRPGILD-FGLVAAIDWQSK 358 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E E + GI E L +Q LFR+ QE L NI KHA AS V++Q + Sbjct: 359 EFEKQ-LGIPCEFVSNQAEIDLDLDQATALFRIFQEALTNIAKHAQASLVSVQLMHTPQY 417 Query: 445 LMLVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + L I D+G G+ + + FG+ GM ER A+GG+L +S GT V+++LP Sbjct: 418 VRLEIIDNGRGIELADRAKPKSFGIRGMVERSVAMGGSLSVSTAPKGGTVVAINLPL 474 >UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FQK5_DEHSB Length = 1229 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 8/225 (3%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD 336 R++++ E L++RL+E +E R +ARELHD +GQ++T ++ + D Sbjct: 997 RDISERKAAEY-ELHTLSQRLVELQEEERATIARELHDQVGQSLTVLKLMLDKAKDSLPD 1055 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 + ++ + L + +VR + LRPR LDDL L A+ + GI + Sbjct: 1056 RS--EKLLAEAQPLVSELISSVRNMSLDLRPRMLDDLGLLPALLWYFDRFSSQ-TGINVN 1112 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 + + S ++R+ QE L N+V++A V ++ +L LVI+D G G Sbjct: 1113 FQHAGLKRKFSPQLGTAVYRIIQEALTNVVRYAGVDHVLVRARADKNQLALVIQDSGKGF 1172 Query: 457 PPGSGQQGF--GLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 P G GL GM+ERV LGG L I GT + V LP Sbjct: 1173 NPAQRATGMSSGLKGMKERVRFLGGKLDIESKPGEGTHIIVELPL 1217 >UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TKD1_RICCO Length = 383 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 7/238 (2%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 ++ L++G I L+ + L++ A+ Q L E E R+ +ARE+HD++GQ ++ Sbjct: 148 NTIGALVIGHNITELKASERHLEESRAQLQMLTYHREEAREGERKRIAREIHDELGQLLS 207 Query: 322 AIRTQAGIVQRLAAD-NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 +R + D N ++ + + D V L RLRP L+ + A+ Sbjct: 208 VLRLGISTLDYGYGDTNPDLRNKTAKMGAVVDQAIDMVHTLATRLRPAVLES-GIALALE 266 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 L++E + GI L ++ + + + +FR+ QE L NI++H+ A V ++ Q Sbjct: 267 WLVQEFS-KSTGIDCELSVPDEDIDFDKERALPVFRIVQESLTNILRHSQADHVEIELTQ 325 Query: 441 QDERLMLVIEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVS 494 E L L I D+G G + + FG+ GM ER+ LGGTL I S GT + + Sbjct: 326 DQEHLKLSIHDNGQGFEVSKATKKGSFGIIGMHERILMLGGTLEISSSSEQGTEIRLE 383 >UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSI9_9BACT Length = 656 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 76/235 (32%), Positives = 105/235 (44%), Gaps = 10/235 (4%) Query: 270 GAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 + L++ + Q L+ RLLE +ES RR +ARELHD+IGQ +TA++ Sbjct: 409 AQDVTEREMDEAELKRTTEQLQTLSRRLLELQESERRHIARELHDEIGQGLTALKINLQA 468 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 VQR+A A + I + VR L LRP LDDL L A+R + + + Sbjct: 469 VQRMANSTAFSPRLLDSI-GIVDKTLRQVRNLSLDLRPSMLDDLGLFAALRWYADQ-QAQ 526 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 G+ E FRV QE L NIV+HA+A VT+ ++ L L I Sbjct: 527 RAGLRIQFAAEPMEMRQDPALETACFRVAQEALTNIVRHAEAQNVTIDLNVAEKDLQLTI 586 Query: 450 EDDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 DDG G ++ GL GM ER + +GG + GT V P Sbjct: 587 RDDGIGFDMKKVREHVAAGSSLGLLGMEERASLMGGRVEFKSTPGEGTEVYAWFP 641 >UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8G136_DESHD Length = 497 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 33/312 (10%) Query: 218 PIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLL--------------SLLVQS 263 ++ + W + ++ L A+I ++ +L+ ++ + Sbjct: 171 AVVTMVWSFVATALFVSALGITAAVILTKVLTRPVRELVALTQKVARGNLTVQGTVRAED 230 Query: 264 LTGLL---LGAGIQRLRELNQSLQKELARNQ-------HLAERLLETEESVRRDVARELH 313 G+L I L E N+ + LA+ + L E+++ +E R+ ++RELH Sbjct: 231 EIGVLTQAFNQMINSLSETNRERENLLAKLKENEGMRIQLLEKVMIAQEEERKRISRELH 290 Query: 314 DDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 D+ Q +T++ I++ +SV + Q + Q+ D V + LRP LDD+ Sbjct: 291 DETSQALTSLMVGLKILE-AETSISSVGEKAQEMRQVVSQTLDEVHHMARELRPSVLDDM 349 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRI-DESALSENQRVTLFRVCQEGLNNIVKHADAS 432 L A+ +R+ + + G + L+ + V +R+ QE L N+ K+A A Sbjct: 350 GLIPALGRYIRDYQ-QKYGTEVDFHASGFEGQRLTASAEVAFYRIIQEALTNVAKYAQAD 408 Query: 433 AVTLQGWQQDERLMLVIEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISCL-- 486 +V++ ++ + ++EDDG G + G GL GMRER LGG+++I Sbjct: 409 SVSVVLDWREHWVTAIVEDDGVGFDTENVTNEPSHGLGLFGMRERAALLGGSVNIESKLG 468 Query: 487 HGTRVSVSLPQR 498 GT V + +P + Sbjct: 469 TGTTVFIKIPIQ 480 >UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFK0_DESAA Length = 832 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 7/219 (3%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASV 340 ++K + L+ R++ ++E+ R+ +ARELHD++GQ +T +R A ++ D +A+ Sbjct: 607 EIKKAQEALRRLSNRMIISQEAERQAIARELHDELGQILTVLRMDAVWFKKRLKDSDAAT 666 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 ++ + +L + VR + RLRP LDDL L A+ + E GI E Sbjct: 667 QERASAMCELIDKTIEDVRGIAVRLRPGVLDDLGLVDALEWYTSDFE-RRTGITCIFEHD 725 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG- 459 + L +R+ QE L N+V+HA + E L+I D+G G G Sbjct: 726 -NIPNLGNAISTAAYRIAQEALTNVVRHASTDRADVSLSFDQEEFTLIISDNGVGYDGGM 784 Query: 460 -SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 +G G+ GMRER GGTL + G+R+ + Sbjct: 785 VEESEGLGIAGMRERAMLAGGTLEVEAGEDAGSRIIFRI 823 >UniRef50_B8G147 Multi-sensor signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G147_DESHD Length = 779 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 19/271 (7%) Query: 236 LMNAIALIAS--QTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHL 293 ++ + +IAS +++ ++LL S+ GL LG I+ EL L K+ + L Sbjct: 498 VLGVLNIIASNLESFTKEDLNLLNSI------GLQLGVAIEN-AELWVELNKKEMLRKQL 550 Query: 294 AERLLETEESVRRDVARELHDDIGQTITAIRTQA-GIVQRLAADNASVKQSGQLIEQLSL 352 +++ +E R+ ++RELHD+ Q+I A+ +++ + D + ++ + Sbjct: 551 LNKVITAQEEERKRISRELHDESSQSIAALGVGLKSVIEIMEFDKEYALTVLEDLKNNTS 610 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 + + +++ LRP LDDL L AIR + L GI H+ + D L++ + Sbjct: 611 SILKELHQIIYDLRPSLLDDLGLLPAIRWYVES-RLSNTGIKPHVAFTGDPLRLTDETEI 669 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL------PPGSGQQGFG 466 T+FR+ QE + N VK+++A + L + L + IEDDG G G++ FG Sbjct: 670 TIFRIVQESITNAVKYSNAKNLYLGLEFGQDSLFVYIEDDGDGFNIEKALAQKDGKESFG 729 Query: 467 LTGMRERVTALGGTLHISCL--HGTRVSVSL 495 L GM ER +GG + I +GTR+ + L Sbjct: 730 LLGMTERAELIGGEIEIKSRSNNGTRIELKL 760 >UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G173_DESHD Length = 482 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 11/244 (4%) Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITA 322 + L + Q L + LQ + Q L ++++ +E R+ ++RELHD+ Q++T+ Sbjct: 238 NAMALSIQNYAQEREALVEELQAKETVRQELLKKVISAQEDERKRISRELHDEASQSLTS 297 Query: 323 IRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 + + L ++ +++L+ V R+ LRP LDD+ L AI Sbjct: 298 LILGLKYLSEL-EEHEKSPAMASELKELASSTLKEVHRIAVELRPTVLDDMGLVPAIERF 356 Query: 383 MREMELEGR-GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 ++ + + R + H + RI S L +TL+R+ QE L N+ K+A+A ++ + Sbjct: 357 VKFFKRQYRLDVDFHAQNRI-ASRLPNEIEITLYRIVQEALTNVAKYAEARNASIVLEIK 415 Query: 442 DERLMLVIEDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSV 493 + + L+IEDDG G + G+ GM+ER + LGG I GT V V Sbjct: 416 PDYVNLIIEDDGKGFDVDQVLKSSASDSHLGIAGMQERTSLLGGEFTIESSPDQGTAVYV 475 Query: 494 SLPQ 497 +P Sbjct: 476 RIPM 479 >UniRef50_A0LKW7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKW7_SYNFM Length = 535 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 15/246 (6%) Query: 266 GLLLGA-----GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 G ++GA I + +L + + ++L+ +LL E R+ +ARELHD GQ++ Sbjct: 271 GDIIGAIQSIRDITDRKRARDALLESERQLRNLSAQLLRAHEEERKRIARELHDSTGQSL 330 Query: 321 TAIRTQAGIVQRLAAD--NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQA 378 A++ + + + L + RR+ LRP LDDL + Sbjct: 331 AALKFYVDNALNMKERGKPDEMANCLDRMVPLIRNAIEEARRIYMGLRPSILDDLGIIAT 390 Query: 379 IRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 I+ RE++ + E + E+ ++ +FR+ QE LNNI+K+ A VT+ Sbjct: 391 IQWYCREVQKTCPKTNILERIDVQEDKIPEDIKIVIFRLVQESLNNIIKYGKAERVTISL 450 Query: 439 WQQDERLMLVIEDDGSGLP------PGSGQQGFGLTGMRERVTALGGTLHISC--LHGTR 490 + L+++D+G G + +G GL GMRER+ GGT I GT Sbjct: 451 VSTSSAIELIVQDNGVGFDLDAYLHTENRNRGLGLAGMRERMELSGGTFSIQSIIGEGTT 510 Query: 491 VSVSLP 496 + P Sbjct: 511 IRAVWP 516 >UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UN54_9BURK Length = 610 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 8/235 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L A + + Q L+ + L+ L E R+ +A E+HD++GQ +TA++ Sbjct: 369 LQAEVAERKRTEQELRASREELRELSWHLEVIREEERKRIALEVHDELGQLLTALKIDIS 428 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++Q A N + + +L VR + LRP L + L A+ L ++ Sbjct: 429 LLQMRLAGNPEAQGKTDAMRELIERTMWMVRNVANHLRPAAL-NFGLVSALEWLAQDFNA 487 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I + DE L + + +FR+ QE L N+ +HA AS V L + + L Sbjct: 488 RYY-IQCTVVTHGDEPVLEDARATAIFRIAQESLTNVARHARASHVVLTLRSGEGFIDLE 546 Query: 449 IEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 I DDG G + + +GL GM ER +GG L I+ GT V++ +P Sbjct: 547 IRDDGCGFDRDAVSARQRGSYGLLGMAERARLIGGALTITSGASTGTVVALRIPL 601 >UniRef50_A6WW19 Integral membrane sensor signal transduction histidine kinase n=46 Tax=Rhizobiales RepID=A6WW19_OCHA4 Length = 485 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 15/250 (6%) Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAREL 312 + + ++++ T +LL +R+ + + + LA+R+++T+E R +AREL Sbjct: 234 LIAVPAVMLVFATCMLLNLRERRMAD---------NKLKELAQRIIDTQEEERARLAREL 284 Query: 313 HDDIGQTITAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLD 371 HD I Q + +R + R D+ + + G VRRL LRPR LD Sbjct: 285 HDGISQNLVGVRYAIDLASRQVRMDSGGAPLAIEKASDALNGAIKEVRRLSHDLRPRILD 344 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 DL L A+++L E GI + LE L L+RV QE L N+ +H+ A Sbjct: 345 DLGLTVALKALCEHFS-ERTGIETQLEASGLNETLKPEASTALYRVVQEALTNVERHSGA 403 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ---QGFGLTGMRERVTALGGTLHISC-LH 487 S V+++ W ++ + + DDG+G + G GL M+ER+ GG L + Sbjct: 404 SQVSIRLWGSGGKVTMTVADDGNGFTARDLKDQLSGLGLRNMQERMAHFGGVLLVETGAD 463 Query: 488 GTRVSVSLPQ 497 GT+++ LP+ Sbjct: 464 GTQLTARLPK 473 >UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CZ92_MYXXD Length = 1080 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 11/236 (4%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L L + + + R + L RL +E R+ +ARELHD+ GQ +TA++ Sbjct: 830 LALRTLQAEREQALEEAEAGRERLRRLTMRLEAAKEEERKHLARELHDEFGQALTAVKLN 889 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 G++ A+ + + + L + VR L LRP QLD+L L A+ +RE+ Sbjct: 890 LGLMNTFASPSVT---RLPEVVALIDRLIGQVRALSVDLRPPQLDELGLVAALEWYLREV 946 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 G+ +LS+ + + +FR+ QE + N ++HA A + ++ + Sbjct: 947 -ARRSGVELVFTASSAPPSLSKGRDIAVFRIIQEAVTNALRHASARRIDVRLETVGCVIR 1005 Query: 447 LVIEDDGSGLP-----PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 L + DDG G G G FG+ GM+ERV LGG ++ GTRV + Sbjct: 1006 LEVRDDGKGFDVNQVLMGRGPGSFGVFGMQERVRDLGGHFEVTSRPGEGTRVVAEV 1061 >UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR7_DESMR Length = 482 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 11/295 (3%) Query: 213 FCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAG 272 CL ++A Y + A + P D + + + A Sbjct: 188 VCLLAAVVATRLAYRIVHPIDQLAQAAGQIRQGNYGVRIPPDDQAEVGRLASAFNDMAAT 247 Query: 273 IQRLRELNQ----SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + R + N+ +L+ + AR+ L +++L +E R+ ++RELHD+ GQ++ ++ Sbjct: 248 LTRKDDENEHLLTALRDKDARHVRLLQKVLSVQEDERKRISRELHDEAGQSLASLLAYLQ 307 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++ +S +++ ++ L + + +R++ LRP LDDL L A+ + L Sbjct: 308 LL-MAGEVTSSQREAIGQLKSLVVEILGGLRKMAVELRPPALDDLGLVPAMAKYVDGFAL 366 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + R + + D L + L+R+ QE L N+ +HA+A AV ++ + + L Sbjct: 367 Q-RDLTAIFAPEDDNPELDPAVALALYRILQESLTNVARHAEAKAVRVELAAEGGDIALT 425 Query: 449 IEDDGSGLPPGSGQQG---FGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 + DDG G + G G+ GM ER LGGT ++ GT V V+LP+R Sbjct: 426 VSDDGRGFDAAALPAGEESLGIYGMMERAELLGGTFQMTSRPGQGTTVRVALPRR 480 >UniRef50_A6GQJ7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GQJ7_9BURK Length = 362 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 3/246 (1%) Query: 254 DLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELH 313 D+ + Q++ +R+ E LQK R + L+ L E R +ARE+H Sbjct: 112 DITERVEAQNIRAAAQAELERRVIERTAQLQKAHDRMRRLSAHLTTVREEERTRIAREMH 171 Query: 314 DDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 DD+G +TA + + A++ + + + L+ G +++RR+L LRP LD L Sbjct: 172 DDLGAKLTAFDLELKALSYRCANDQKLTVRIESMLDLAQGAMESLRRILSDLRPGVLDHL 231 Query: 374 TLEQAIRSLMREMELEGRGIVS-HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 L A+ L+ E + + + ++ LS+ L+R+ QE LNN+ KH+ AS Sbjct: 232 GLWAAVEHLLGEFSQRTKVVSVLDIAPELEHVRLSKATETALYRILQEALNNVSKHSGAS 291 Query: 433 AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTR 490 V + + ++ ++D+G G+ + GFGL G+ ER +G I G Sbjct: 292 KVEVTVNTEGRAVVFQVKDNGRGMAVRTFNAGFGLMGIEERAWDIGARCTIDSILGQGVC 351 Query: 491 VSVSLP 496 + + LP Sbjct: 352 IKLRLP 357 >UniRef50_Q01NC5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC5_SOLUE Length = 437 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 80/248 (32%), Positives = 126/248 (50%), Gaps = 7/248 (2%) Query: 255 LLLSLLVQSLTGLLLGA-GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELH 313 L +++ + GL+L A I+++ L + +HL+ RL+E +E RR ++RELH Sbjct: 187 LAVTIALVIGLGLVLAAFSIRKILALENASSASQEALKHLSARLVEAQEDERRSISRELH 246 Query: 314 DDIGQTITAIRTQAGIVQRL--AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLD 371 D++GQ++T + + + +L D SV I++ VR + LRP LD Sbjct: 247 DEVGQSLTGVLLEMANLSKLIRTRDPESVAAKAAEIKREVENSIGVVRNMALLLRPSMLD 306 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 DL L A++ RE+ G+ ++ L E + ++R+ QE L+N V+HA A Sbjct: 307 DLGLVPALQWQAREVSKRS-GLWVSVDAASVSEDLPEEHKTCIYRIVQEALHNAVQHAGA 365 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GT 489 V + QQ + L L IEDDG G G+ G GL G++ERV LGG + GT Sbjct: 366 RHVKVAVEQQPDELRLAIEDDGKGFDAQQGR-GMGLLGIQERVGYLGGKFEVGSAPGKGT 424 Query: 490 RVSVSLPQ 497 + V+LP Sbjct: 425 ALKVTLPL 432 >UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAR1_METSD Length = 465 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 7/234 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA- 327 + I + + +++ R L+ L + +E RR +ARE+HDD+G +TAI+ Sbjct: 231 IITNITQSKNEKLEIERSRQRMAELSAHLTQVKEQERRRIAREIHDDLGGNLTAIKIGLT 290 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 I++R+ D + + +E + +D V R+ LRP L+ L + A+ + E Sbjct: 291 SIIKRINPDEPKLVEKALNLESIVDRTFDIVHRIASDLRPDVLE-LGIVAALEWQCGQFE 349 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + E A+S ++ +TLFR+CQE ++NI KHA A V ++ +D +ML Sbjct: 350 KQFS-LPCRFYSSQTELAVSADEAITLFRICQEAMSNIAKHARARQVEVELLVEDRDIML 408 Query: 448 VIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQ 497 I DDG G+ + FGL GMRERV AL G+L + GT V V +P+ Sbjct: 409 RIVDDGQGIRMQDQHKANSFGLRGMRERVAALDGSLEVEKRVRGGTAVQVKIPR 462 >UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY8_SYMTH Length = 346 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 13/238 (5%) Query: 273 IQRLREL-NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 I R+ E+ N L + Q +A ++L +E R+ +ARELHD+ Q++T+I ++ Sbjct: 104 IARVSEMANLMLDRLAEHRQAVAAQILRAQEEERKRIARELHDETAQSLTSIVVNLEAIE 163 Query: 332 RLAAD---NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 R A + ++ + L ++++ D RRL+ LRP LDDL L A+R + L Sbjct: 164 RQAVGSGVDEALCERLHLTKEVAQRTLDETRRLMMDLRPSVLDDLGLVPALRWFINHRVL 223 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 G+ + + L E LFR+ QE + N+VKHA A V ++ ++ + + Sbjct: 224 PA-GLEADFQVSGLTERLPEELETALFRIMQEAITNVVKHAKAKTVLVRLHREHGEITGL 282 Query: 449 IEDDGSGLP------PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 + DDG G +G GL GM+ER +GG + + GT V V++P R Sbjct: 283 VVDDGQGFHVVHTVGQPVRDRGLGLFGMQERAALVGGKVVVESAPGRGTTVRVTVPDR 340 >UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6U9_9BACT Length = 638 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 11/239 (4%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I + + L+ A+ + L RL E R ++RE+HD + Q +T ++ Sbjct: 395 IARDITEQKRALEQLRNSHAQLRELTGRLHAAREEERGRISREIHDVLAQQLTRLKMDLS 454 Query: 329 IVQRLAAD------NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 + + A ++ + + +L AV+ + LRP LD L L A+ Sbjct: 455 WIDKRLAQSVDETTRQALGEKVRSATELVDSSIGAVQHIATELRPVVLDALGLAAAVEWQ 514 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 + + + E G+ ++ +E L + LFR+ QE L N+++HA A+ V + + Sbjct: 515 VTQFQ-EHTGVQCQVDIDGEEPRLPHDHATGLFRILQETLTNVMRHAGATLVEVSLRMEP 573 Query: 443 ERLMLVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQ 497 + L L + D+G G+ G S GL GMRER GG + I GT V V++P Sbjct: 574 DILTLSVRDNGRGITAGELSNMHSIGLLGMRERALLFGGKVTIHGIPEKGTTVVVTMPL 632 >UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUQ4_PELPD Length = 489 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 8/269 (2%) Query: 238 NAIALIASQTWRDHPVDLLLSLLVQSLTGLLLG--AGIQRLRELNQSLQKELARNQHLAE 295 NA A++ S++ R PV + S+ ++ G I + L + + + L++ Sbjct: 220 NAEAIVVSKSGRRIPVHIKHSVTRVGEMSIMQGLFRDISERVRAEEQLVELNQKLRALSD 279 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-QRLAADNASVKQSGQLIEQLSLGV 354 L +E R +AR++HD+IGQ++T ++ + RL A ++V++ + + Sbjct: 280 HLQTVQERERLAMARDIHDEIGQSLTVLKLDLEWIAHRLPAKESAVQERVNEMRWNIEQL 339 Query: 355 YDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTL 414 AV+R+ LRP LD L L AI + E GI + + L + Sbjct: 340 TSAVQRIAADLRPPLLDSLGLAAAIDWHVAEFSRRS-GIECFVMLNEEVDPLEPQLATAV 398 Query: 415 FRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG--SGQQGFGLTGMRE 472 R+ QEGL N+++HA A+ V++ ++D +L+L I D+G G+ P Q +GL GM+E Sbjct: 399 MRIVQEGLTNVLRHARATEVSVSLCKRDGQLVLEIGDNGRGIRPEEIESPQAYGLMGMQE 458 Query: 473 RVTALGGTLHISCLH--GTRVSVSLPQRY 499 R G L + GT + V++P + Sbjct: 459 RARICRGELTVGGAEGGGTLLRVTVPLQS 487 >UniRef50_D1CE67 Multi-sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CE67_THET1 Length = 748 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 10/220 (4%) Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASVKQSGQ 345 + A ++ +E RR +AR+LHDD Q + A+ + ++ D + ++ + Sbjct: 525 EEQLSGYAAAVIAAQEEERRRIARDLHDDTAQALIALSRRIDSLREDLGDLPEAAQRKIE 584 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 ++ L+ +VRR LRP LDDL L A+ L+ E + I + L+ + +E Sbjct: 585 DLKALTDQTLASVRRFSRDLRPSILDDLGLVPALEWLVSE-NAKRYKITTRLKIQGEERR 643 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG------ 459 L + LFR+ QE LNN KH+ A+ ++ D L + D+G G Sbjct: 644 LQPEVELALFRIAQEALNNTAKHSQATGAAVELTFGDTWCRLTVSDNGIGFQTPPNISEL 703 Query: 460 SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 + + G+ GM ER LGG L++ GTR++V++P Sbjct: 704 ADRGRMGVMGMYERANLLGGNLYVRTAPGQGTRITVTVPL 743 >UniRef50_A1HRV6 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRV6_9FIRM Length = 473 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 17/313 (5%) Query: 200 QLGLPDELSRFTPFCLALPIIALAWHYGWQGALIA----TLMNAIALIASQTWRDH---P 252 L ++ +R + + + + W +LI +L +A+A I S Sbjct: 156 TQQLLNKTNRNFFIGIIMMCVIATFLATWLTSLIIRPIRSLADAVAEIQSGNLSARVEAK 215 Query: 253 VDLLLSLLVQSLTGLLLGAGIQRL--RELNQSLQKELARNQHLAERLLETEESVRRDVAR 310 + LL + ++ G + L + L+ + A L ++L +E R+ ++R Sbjct: 216 TGDEVGLLAVAFNQMVAGLKEKEKENNLLLEELRHKEAMRAFLIKKLFTIQEDERKRISR 275 Query: 311 ELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQL 370 ELHD+ GQ + ++ ++ D K+ Q +++ + +R++ LRP L Sbjct: 276 ELHDETGQLLASLLAYMKLLLSKLTDQQQ-KELLQEARDVAVNALEGLRKIAVELRPPVL 334 Query: 371 DDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHAD 430 DDL + A++ ++ + +G+ H + L + L+R+ QE L NI KHA Sbjct: 335 DDLGVTAAMQKYIQTFSGQ-QGLKVHFSVPEKQLELDPEVSLALYRILQESLTNIAKHAR 393 Query: 431 ASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG----FGLTGMRERVTALGGTLHISCL 486 AS V + + + LV+ DDG G+ G G G+ GM+ER LGG+L I Sbjct: 394 ASNVYVCLSAAGQTVRLVVRDDGLGIDGGLESAGQKNRLGIYGMKERAELLGGSLDIHSE 453 Query: 487 H--GTRVSVSLPQ 497 + GT V +LP+ Sbjct: 454 NGCGTVVIATLPK 466 >UniRef50_A6TSW3 Histidine kinase n=2 Tax=Alkaliphilus RepID=A6TSW3_ALKMQ Length = 392 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 121/244 (49%), Gaps = 11/244 (4%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + G+ L L++++ +L+ + Q L R++ +E R VARE+HD Q++ Sbjct: 143 LAFKIGIALDFLSGNLQDISHTLED-MQEKQFLGRRIIRVQEEERHRVAREIHDGPAQSL 201 Query: 321 TAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + +A I ++L D ++ Q ++++ +R+++ LRP LDD+ L + Sbjct: 202 ANVVIKAEICEKLMDIDLEKSREEIQNLKKILRDGIKDIRKIIYNLRPMSLDDIGLIPTL 261 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 + + E E + I L ++ + +++FR+ QE LNN+ KHA A+ + ++ Sbjct: 262 KRYVETFEEETQ-INMILNILSEDPIKDSIKNLSIFRIIQEALNNVRKHARATNINIKIE 320 Query: 440 QQDERLMLVIEDDGSGLP------PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRV 491 + L ++D+G G P + + GFGL M+ERV L G ++I GT++ Sbjct: 321 ITQTDIRLHVQDNGIGFDTENIKVPQNYEGGFGLLNMKERVGLLDGKINIKSKINQGTKL 380 Query: 492 SVSL 495 + + Sbjct: 381 MIYI 384 >UniRef50_A0LNC5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNC5_SYNFM Length = 561 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 9/234 (3%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV--QR 332 + +E ++L+ ++ + L+ +LL +E R +A ELHD IGQT+ A++ R Sbjct: 318 QRKEAERNLRVSESQLRVLSSKLLTVQEEERARLAHELHDSIGQTLVAVKFGIENALKGR 377 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 +V Q + + + R+L LRP LDD AI L E E G Sbjct: 378 TVGGLDAVSQLLDPLVPMVQNAVEEARKLYMGLRPTILDDFGAIAAIGWLCSEFEETHTG 437 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 ++ IDE + ++ LFR QE LNN +H++A+ V L ++ + LV+ED+ Sbjct: 438 MLVEKTVDIDEEHIPIPVKIVLFRTVQEALNNAARHSEATRVGLFLKKEKSGITLVLEDN 497 Query: 453 GSGLP-----PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 G G G+ G G+ M+ER+ GGT I GT + P + Sbjct: 498 GIGFDSSRYLSGAQGTGLGIVSMKERIELSGGTFSIESQSGAGTAIRAFWPDEF 551 >UniRef50_UPI0001693FB4 two-component sensor histidine kinase of nitrate reduction n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693FB4 Length = 386 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 6/234 (2%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G + G++++ + + Q+++A + + +L+ +E+ R+ ++RELHD IGQ + + Sbjct: 149 GPMFILGVRKVGDERKEEQEKIA--KMITRSILQAQENERKRISRELHDGIGQQLYIMMI 206 Query: 326 QAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 G+++ A S+ +E+ + + VR L LRP LDD+ L A+R+ +++ Sbjct: 207 HLGMIKAEAEGQDSIINPLGELEESTRLLIQDVRHLSAELRPSTLDDIGLVAALRNYIQD 266 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 GI H + + L+R+CQE L N K+A + + ++ ++ Sbjct: 267 YS-HKFGIQVHFAYEGSKERFPAPVETALYRICQEALINAAKYAQTENIHILLDREPDQA 325 Query: 446 MLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 L ++D G G G +G GL M ER LGG++ I+ GT++ V +P Sbjct: 326 RLSVQDFGVGFELKPGTARGVGLYSMEERAGILGGSVTITSQKTKGTKIEVRIP 379 >UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JH43_BURP8 Length = 493 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 9/228 (3%) Query: 277 RELNQSLQ-KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 R+L + + ++L LA E ++ +ARELHDD+GQ +TA++ A I+Q+ Sbjct: 260 RDLTEHKRLEQLEHVGELAAATERAREEEKKRIARELHDDLGQQLTALKMSAVILQQDVE 319 Query: 336 DNASVKQSGQLIEQL---SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 ++ L + A+RR+ LRP LDDL L A+ L E G Sbjct: 320 AGHYTAETAAKARGLVVQADDTMSALRRIASNLRPTMLDDLGLLPAVEWLADEFS-RRYG 378 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I + E A S+ +FR+ QE L N+ +HA A+ V + D + I+D+ Sbjct: 379 IKASTRLSAGELAFSDTASTAIFRIVQEALTNVARHACATEVVVTIELDDNACEVRIDDN 438 Query: 453 GSGL--PPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G G PG FGL G+RERV L GT+ + G RV + P Sbjct: 439 GRGAASAPGDKPDSFGLLGIRERVRQLNGTVSLGNRLDRGFRVQIRFP 486 >UniRef50_UPI000174566C two-component hybrid sensor and regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174566C Length = 399 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 9/231 (3%) Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 +L + +HL+ RLL +E R+ ++RELHD + Q +T+I + ++ + N Sbjct: 147 QLLAKSRHMQEDLRHLSRRLLTVQEEERKRISRELHDVVAQALTSINLRLITLKTESNSN 206 Query: 338 AS-VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 A +++ + +++ + V R LRP LDDL L A++S + ++ GI Sbjct: 207 ARNLRRRIAMTQRVIERSVEIVHRFARDLRPTLLDDLGLIPALKSYLTAY-MQRTGIRVS 265 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 + ++ +R L+RV QE L N+ +HA AS + + + I D+G G Sbjct: 266 FSVSPNIESIDSTRRTVLYRVAQEALTNVARHAKASQANVSIRLHANNVNMQIHDNGCGF 325 Query: 457 PP-----GSGQQGFGLTGMRERVTALGGTLHISCLHG--TRVSVSLPQRYV 500 + GL GM+ERV +GGT ++ G T V V LP + V Sbjct: 326 QVEGNAFARSSKCLGLLGMKERVEMVGGTFVVASAPGKETTVQVELPGKKV 376 >UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R2_SOLUE Length = 838 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 8/255 (3%) Query: 250 DHPVDLLLSLLVQSLTGLLLG--AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRD 307 + P+++ LS + S L + + I + ++ +LQ+ + + LA L+ +E RR Sbjct: 580 EFPIEVSLSSVQTSEGTLSVAFVSDITKRKQAEAALQRSESELRALARSLITAQEDERRR 639 Query: 308 VARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 VAR+LHDD+ Q + + + G + + +++ + + + + VRRL L Sbjct: 640 VARDLHDDVTQRLALLSIEIGKLATETSGSVEEIRKRLRYFQSQARLASNEVRRLSHGLH 699 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P ++D L A+ +E +GI + + ++ LS L+RV QE L N+ Sbjct: 700 PSVIEDFGLSTALEDFCQEF-ARAQGITLIFDALVADAVLSAGDASCLYRVAQECLRNVA 758 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHIS 484 KH+ A+ V + + + L I+D+GSG G+ + +G GL M+ERV GTL I+ Sbjct: 759 KHSGATEVRVGIARDGANVRLTIKDNGSGFHAGADRVNKGLGLVSMKERVKMANGTLLIT 818 Query: 485 CL--HGTRVSVSLPQ 497 GT + S+P Sbjct: 819 SQPGQGTEIVASVPL 833 >UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67JE7_SYMTH Length = 477 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 11/309 (3%) Query: 195 ISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVD 254 +S + + ++ R LAL LA G+ G T+ + A+Q + Sbjct: 161 LSEAHLMAMLRDMRRRQMLTLALA-CVLAVLLGYLGIWKVTVRVPQLVRAAQAVGRGDLT 219 Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQ---KELARNQHLAERLLETEESVRRDVARE 311 + + G L A Q +R+L ++ ++ A + L +++L +E R ++RE Sbjct: 220 VRVRPGPADEFGHLAEAFNQMVRDLARTRALVVRKEAARKALLQKVLTAQEEERARISRE 279 Query: 312 LHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLD 371 LHD++GQ +T + +++ +A + + L+ G ++VRRL LRP LD Sbjct: 280 LHDEVGQALTGLIVGLRVLE---EGDAERQSQVTYLRDLAAGTLESVRRLSRDLRPAVLD 336 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHAD 430 D+ L AIR + GI ++ DES L TL+R+ QE L N+ +H+ Sbjct: 337 DIGLVAAIRRYAGDF-ARYHGIEGTVQVVGDESVRLPPVVETTLYRITQEALTNVARHSQ 395 Query: 431 ASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--G 488 A + + + LVIEDDG G PG+ ++G GLTG+ ER+ + G + I G Sbjct: 396 ARHFGIVLDLRGPDVRLVIEDDGRGFDPGAPREGTGLTGISERLALVSGRMTIESSPESG 455 Query: 489 TRVSVSLPQ 497 T + +++P+ Sbjct: 456 TTLFIAVPR 464 >UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4S0_9BACT Length = 998 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 6/241 (2%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 Q + +++ I + Q L + + L RL E R +ARE+HD++GQ +T Sbjct: 756 QIIGAVVVFLDITERKRAEQQLTLSHDQLRKLTARLESVREEERILIAREIHDELGQALT 815 Query: 322 AIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 ++ + ++ ++A + +++ + I L G +V+R+ LRP LD L L AI Sbjct: 816 GVKLELCLLHDQIAEVSPMMRKKLESISTLVDGTIQSVQRIATELRPVVLDQLGLIPAIE 875 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 E + GI L+ + LS +FR+ QE L N+ +HA AS V + + Sbjct: 876 WQAHEFQAR-TGIQCTLDVYLRAVTLSHAGSTAMFRIFQEILTNVARHAQASVVHITLQE 934 Query: 441 QDERLMLVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGT--LHISCLHGTRVSVSLP 496 Q L+L + D+G G+ + GL GMRER LGG S GT V V +P Sbjct: 935 QAGSLVLDVRDNGRGVTDAELADPHSLGLVGMRERALLLGGETIFTGSPGTGTAVRVRIP 994 Query: 497 Q 497 Sbjct: 995 L 995 >UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kinase n=5 Tax=Burkholderia RepID=Q13H12_BURXL Length = 384 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 9/245 (3%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 +++ +G L G Q+ E + + LA + T E + +ARELHDD+GQ + Sbjct: 119 IRTASGELCGFAKVTQDLTEQNRLAEFEQLRRLATHIQATREEEQIRIARELHDDLGQQL 178 Query: 321 TAIRTQAGIVQRLAADNASVKQ----SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLE 376 A++ ++ + DN ++ + + L ++RR+ LRP L+ L L Sbjct: 179 AALKMALADLETILRDNGAIAALTLTHTKDMHHLIDVTVASLRRIAAGLRPIVLETLGLV 238 Query: 377 QAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL 436 A+ L+ + + I + + D+ +SE LF + QE L N+ +HA A VT+ Sbjct: 239 PALEWLIGDF-TQRYHIDVNARIQTDDMNVSEAASEALFHIIQEALTNVARHAHADEVTV 297 Query: 437 QGWQQDERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHISCLH--GTRVS 492 + + +L +ED+G G+ + + FGL GMRERV L G+L I G R++ Sbjct: 298 ELARGGRTCVLRVEDNGQGMASATLPRETSFGLLGMRERVHRLNGSLSIDSTPGCGFRIA 357 Query: 493 VSLPQ 497 ++ P Sbjct: 358 ITFPL 362 >UniRef50_A8LRP9 Integral membrane sensor signal transduction histidine kinase n=28 Tax=Rhodobacterales RepID=A8LRP9_DINSH Length = 480 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 84/259 (32%), Positives = 128/259 (49%), Gaps = 13/259 (5%) Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESV 304 +QT+ L +LL +GLL+ +RL + A+ + L +R+L+T+E Sbjct: 213 AQTFFWIGAITLAALLAVFASGLLINIRERRLAD---------AKLKALTQRVLDTQEEE 263 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLG 363 R VARELHD I Q + IR + +R +A +++ + G VRR+ Sbjct: 264 RGRVARELHDSISQLLVGIRYALELARRRVQTGDARAQENIEKGIDGLNGAIQEVRRISR 323 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP QLDDL L AI+ L E GI + ++ + + L ++ L+R+ QE L Sbjct: 324 DLRPGQLDDLGLGPAIQDLAEEFTKR-TGIRAEMKTVVFRNRLDPEAKIALYRIAQEALT 382 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP-PGSGQQGFGLTGMRERVTALGGTLH 482 NI +HA A+ V L + L + D+G GL G G GL M+ERV L GTL Sbjct: 383 NIERHAQATEVHLDLFGHQTGATLRVADNGRGLANVSRGAGGLGLRNMQERVEQLDGTLQ 442 Query: 483 I-SCLHGTRVSVSLPQRYV 500 + S GTR+ ++P ++ Sbjct: 443 VFSSEAGTRIDATVPLSHI 461 >UniRef50_A0LPI6 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPI6_SYNFM Length = 650 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 8/233 (3%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 I ++ +LQ+ + L+ +LL +E R+ +ARELHD IG +++ I+ R Sbjct: 418 ISERKQTEAALQESERQLHLLSSQLLAAQEQERKRIARELHDGIGSSLSTIKFSLEATLR 477 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 + +S Q + L+ D RR++ LRP LDD + + + Sbjct: 478 RMRQGSQSYESLQNVIVLTQHAIDESRRIMTDLRPPILDDFGILTTMDWFCAQFRKAYTH 537 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 + E + E + E ++ +FRV QE L+N K++ AS V + + L L I D+ Sbjct: 538 LRVDKEIEVVEEDIPEALKIVIFRVLQEALHNTAKYSQASRVKIGLRKTPGTLELKIGDN 597 Query: 453 GSGLP------PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G G G GL M+ER GGT + GT + + P Sbjct: 598 GIGFDRTSASRRSDSSSGLGLPSMKERTELSGGTFSVESTEGAGTTLCATWPL 650 >UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Labrenzia RepID=A0NNP2_9RHOB Length = 453 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 9/287 (3%) Query: 217 LPIIALAWHYGW---QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGI 273 L L +GW G + + I + R L ++ ++ ++ G I Sbjct: 162 LGYAILLEKWGWMLGTGLYTDDIAREVTAIRTDFARSIRQTLFVTFMITLAAIVIAGFLI 221 Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 +R Q + + L R+ + +E R+ V+ ELHD I Q + ++R ++ Sbjct: 222 AGVRFSEQRFADS--KLKELTNRIFQVQEQERKRVSTELHDSISQLLVSVRYGVEMIHSE 279 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 A ++ + G VRR+ LRP LDD+ L A+ SL +E + + GI Sbjct: 280 ANREPELQAQAAKCLKTLDGTIAEVRRISRDLRPSVLDDMGLAAALGSLGKEFQNQS-GI 338 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 +++ S LSE + L+RV QE + N+ +H+ AS V + ++L+L +ED+G Sbjct: 339 TVNVQAEQCHSRLSEGAKTALYRVVQECMTNVARHSHASEVAISLKVGVQQLVLSVEDNG 398 Query: 454 SGLP-PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 GLP P G G MRER+ GG L +S GTR+ V +P Sbjct: 399 VGLPRPLPKSGGLGFRNMRERIETYGGRLTLSRRASGGTRIKVQMPL 445 >UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIL1_ACIBL Length = 552 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 77/271 (28%), Positives = 138/271 (50%), Gaps = 17/271 (6%) Query: 236 LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 ++ + + ++ + P + L + + L + + + ++L++ AR L+ Sbjct: 262 VIGVMLIGFAKPYVWLPTEHELLRAIADRSALAI-----QRAGMTEALREREARIAELSG 316 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 LL +E R+ ++RELHD+ GQ + IR G+++ + + + +E + Sbjct: 317 YLLRAQEEERKRISRELHDETGQALMVIRLYLGMLEATVTTRTAKTKIHETLE-VVDRTI 375 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 + +RR++GRL P L +L L AIR +++ + G+ + + + LS ++ Sbjct: 376 EGIRRIIGRLSPLVLQELGLIAAIRKEAKDL-AKSAGVKAKVSVGDNVGRLSPVTETAVY 434 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL----PPGSGQQGFGLTGMR 471 RV QE L+N+ KHA A+ VT+Q + + L IEDDG G+ P G++ FGL GMR Sbjct: 435 RVVQEALHNVAKHAHATTVTIQLRRDGGLVKLCIEDDGVGIKQSQKPNPGRRSFGLAGMR 494 Query: 472 ERVTALGGTLHISCL------HGTRVSVSLP 496 ER+T L GTL + GTR+ V++P Sbjct: 495 ERITTLEGTLKVGPASRNDEGAGTRIEVTVP 525 >UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TG52_RICCO Length = 335 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 8/231 (3%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 I + + Q +++ Q L + + +E R +ARE+HDD+G +TA++ + Sbjct: 101 NISQSKHEKQEIEQARRDLQALTAHIHQVKEQERVSIAREIHDDLGGNLTAMKLGLSTII 160 Query: 332 RLAADNASVK-QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + D+ V + +++ + +DAV R+ G LRP LD L L A+ + + + + Sbjct: 161 QQIEDSQQVNMEQATMLQAIINQTFDAVHRISGNLRPNILD-LGLVDALEWQVSQFKKQ- 218 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI + + +Q + LFR+CQE L+NI K+A A V+++ D+ L + I Sbjct: 219 LGITARFVTNCHDLECDPDQSMALFRICQEALSNIAKYAQADLVSVELSLVDQALFMTIS 278 Query: 451 DDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHI---SCLHGTRVSVSLP 496 D+G G+ P FGL GM+ER ALGG HI S GT + V P Sbjct: 279 DNGVGIAPADKIKPNSFGLRGMQERAAALGGECHIEASSSGPGTCIHVRAP 329 >UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YIX9_NOCDA Length = 412 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 100/345 (28%), Positives = 151/345 (43%), Gaps = 24/345 (6%) Query: 174 LVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHY-----GW 228 L+ WR + + F + L L L + F F ++L A+A G Sbjct: 63 LLGYTPPWRDGRPLPAGIHFAVLLALASALMAHDTLFMMFTVSLFFRAMALPRRLTLVGI 122 Query: 229 QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGI----------QRLRE 278 +A N + + T R L + + V ++ + +G G+ + R Sbjct: 123 AATAVALYTNTMGFPGTDTERPFLEHLFVYVGVITIQTVAVGGGLVIASKAAEQHRERRV 182 Query: 279 LNQSLQKELARNQHLAERLL-ETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 L+ L N L +LL + E R+ +ARE+HD + Q + I TQ QR+ Sbjct: 183 TVARLEAALEENAGLHAQLLTQAREAGVLDERQRMAREIHDTLAQGLAGIVTQIQAAQRV 242 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 D + + L+ RR + LRP QL + L +A+ L R E G+ Sbjct: 243 WEDPGAARPHADRALGLARESLAEARRSVQALRPGQLAESQLPEALGELTRRWAEEH-GV 301 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 L+ + ALS V LFRV QE L N+ +HADAS V + D+ ++L + DDG Sbjct: 302 RPDLDVTGERVALSPAIEVVLFRVAQEALTNVARHADASRVGVTLSYSDDVVLLDVRDDG 361 Query: 454 SGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 G+ G Q GFGL+ MR+RV +GG L I GT VS ++P Sbjct: 362 RGI-TGHNQHGFGLSSMRQRVRGIGGALEIESGEGEGTAVSATVP 405 >UniRef50_C6P0E7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0E7_9PROT Length = 694 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 13/247 (5%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 Q + + I QSL++ + L ++L +E R+ +A ELHD IGQT++ Sbjct: 437 QFMMSQAIVCDISYRSNAEQSLRESEHAKRMLTAQVLSAQEKERKRIANELHDGIGQTLS 496 Query: 322 AIRTQAG-IVQRLAAD--NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQA 378 AI+ + +L + S++ G +I +L G + +RR+ LRP LDD+ Sbjct: 497 AIKFYVENAISKLNERTIDDSIRIFGNVIPKL-QGAIEEMRRISMDLRPSMLDDIGTLAT 555 Query: 379 IRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 + R+ + L I ES + R +FR+ QE +NN K++ A+ + + Sbjct: 556 LSWFCRQFQGVYESFRIELLLDIKESDIQLPLRTAIFRIVQETMNNCAKYSQANCIHISL 615 Query: 439 WQQDERLMLVIEDDGSGLPP-------GSGQQGFGLTGMRERVTALGGTLHISCLH--GT 489 + + + L +EDDG G + G GL MRER GGT + GT Sbjct: 616 IKTCKEIELTVEDDGRGFDHAEVCARIANAGGGMGLVSMRERAELSGGTFSVESAKCRGT 675 Query: 490 RVSVSLP 496 V V+ P Sbjct: 676 SVRVTWP 682 >UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinase n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z4G8_BURA4 Length = 665 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 14/309 (4%) Query: 202 GLPDELSRFTPFCLALPIIALAWHYGWQGALIATLM-NAIALIASQTWRDHPVDLLLSLL 260 + LSRF P +G G + + + P++ +S + Sbjct: 348 AIGAPLSRFIPERFRAAHARHVEQFGVTGVSERQMGRQRVLFGLRGDGTEFPIEASISQI 407 Query: 261 VQSLTGL--LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQ 318 + L ++ + +L++ + L+ L E + +ARELHDD+GQ Sbjct: 408 RDGTSKLYTVMLRDVTERVRAETALKQSREELRDLSANLQNVREEEKTRIARELHDDLGQ 467 Query: 319 TITAIRTQAGIVQR----LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 +TA++ V+ + A N V++ + L +VRR+ LRP LDDL Sbjct: 468 QLTALKMDLSAVELGLAGVVAPNTGVREQLGGMHGLIDSTVASVRRIAADLRPVMLDDLG 527 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 L AI L + R I + ++A + TLFR+ QE L N+ +H+DA+ V Sbjct: 528 LVPAIEWLANDFTRRYR-ITVDRDIAPVDTAFTGVGATTLFRIVQEALTNVARHSDATNV 586 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISCLH--G 488 L ++ +L I D+G G P + + FGL G+RER GT+ + G Sbjct: 587 QLALKLEEGYCVLRIADNGHGAPENARNEQDRPSFGLIGIRERAHMFEGTVTVDNRPGAG 646 Query: 489 TRVSVSLPQ 497 ++V+LP Sbjct: 647 FTITVALPL 655 >UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulator histidine kinase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Z0_DESAH Length = 708 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 110/224 (49%), Gaps = 7/224 (3%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR- 332 Q++++ L+K + + L+ ++E E R +ARELHD +GQ +TA++ A ++R Sbjct: 477 QQVQKRTVELEKVQDKLRKLSGSIMEAHEIERGALARELHDHLGQVLTALKIDAVWIERF 536 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 L+ + I L VR++ RLRP LDDL L +A+ SL + E E Sbjct: 537 LSPRDPDAAVRAGRISSLIDDTIGDVRKMAFRLRPGVLDDLGLVEALESLTGDFE-ERSD 595 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I + + L+R+ QE L N ++H+ AS V L +L+L I+D+ Sbjct: 596 ITCLFQAAA-LPDIDSTLATALYRIAQEALTNAIRHSRASIVALTLAMDQGKLVLKIKDN 654 Query: 453 GSG--LPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVS 492 G G + QGFGL GM+ER T GG L I GT V Sbjct: 655 GVGFAFDDINENQGFGLAGMQERATLAGGVLEIVSGPEQGTSVC 698 >UniRef50_Q5NZX5 Putative sensory protein, two-component system n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZX5_AZOSE Length = 498 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 120/278 (43%), Gaps = 15/278 (5%) Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 + W G L A + T R ++L G++L A R E + L+ Sbjct: 226 RWSWAGRLCAGTHAERWISLQATPRLMDAGMVLW------DGIMLDATDARRNE--EKLR 277 Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 + + L R+ E + +ARE+HD++GQ +T ++ ++ ++ Sbjct: 278 QSEEFLRDLCVRVGMIREEEKSAIAREIHDELGQLLTVLKMDLSCMREAGGLDSRSVAKM 337 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE- 403 +E L+ + VR + LRP+ LD L L AI L +E R IV L DE Sbjct: 338 LRMESLTDDILYRVRDIASTLRPKVLD-LGLAPAIEWLAQEFSSHTR-IVCRLSINGDEL 395 Query: 404 -SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 L +FR+ QE L N +HA A + + ++ + L L+I DDG G P + Sbjct: 396 CGNLDSTAITAIFRIVQESLTNAARHARAKHIDISLTRRGQFLQLLIRDDGVGFDPDALP 455 Query: 463 -QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 GL+G+RER LG L I GT + V +P Sbjct: 456 ICCNGLSGIRERAVILGAELRIDSSAHTGTTLEVLIPH 493 >UniRef50_C0GKL6 Histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKL6_9FIRM Length = 379 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 8/223 (3%) Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA-DNASVKQS 343 E+ Q ++ R+++ +E R VARE+HD Q++ + +A I ++L + + V+ Sbjct: 157 DEIQLRQQVSLRIIKAQEEERLRVAREIHDGPAQSMANVVLRAEICEKLMSVEPDKVRAE 216 Query: 344 GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 ++ + VR+++ LRP LDDL + +R + E++ + + +E Sbjct: 217 LHDLKDMVKESLQEVRKIIFDLRPMVLDDLGIVPTLRRFIAELQKRTDMNIELVVLGGEE 276 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ 463 L+ V +FR+ QE LNNI KHA+A ++ R+ + I D+G G Q Sbjct: 277 QRLASVLEVAIFRIVQESLNNIYKHAEAKRCVIKLEILPGRINISIADNGRGFDTERTMQ 336 Query: 464 G-----FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRY 499 FGL GMRERV L G + I GT + VS+P + Sbjct: 337 NMDVDCFGLLGMRERVELLDGQIKIVSKPEKGTEIHVSIPIKG 379 >UniRef50_B1Y742 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y742_LEPCP Length = 384 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 6/232 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + R + +++ AR L + E R +ARE+HD++GQ +T ++ Sbjct: 134 LRHEVAVRRSAERQVRESEARLHALTSHFITMREKERTAIAREIHDELGQVLTVLKMDIA 193 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 + R D+A ++ + +L +VR++ LRP LDD+ L AI E + Sbjct: 194 WLARHP-DDARLRVKTDAMSRLIDDTIRSVRKISAGLRPEVLDDMGLVSAIAWQTTEFQK 252 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 G+ + ++ TLFR+ QE L N+ +HA A+ + ++ Q +RL+L Sbjct: 253 R-TGVRCRSALPPETEVFDKDLSNTLFRIFQEILTNVARHAHATRLDVELRQAGDRLVLK 311 Query: 449 IEDDGSGL--PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + D+G G+ + GL GM ER LGGT+ I GTRV VS+P Sbjct: 312 VADNGVGIVVQEANAPTTLGLLGMHERALRLGGTVAIDGEPGAGTRVRVSIP 363 >UniRef50_Q7X326 Putative sensory transduction histidine kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X326_9BACT Length = 454 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 127/246 (51%), Gaps = 4/246 (1%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 L L L+V + L +R + + + + L+++L+ T+E R++++RELHD Sbjct: 195 LSLGLIVALVAVYRLRVLEKRSDQQRVVAEDAERQMRQLSQQLVATQEDERKNLSRELHD 254 Query: 315 DIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 +GQ +TA+R + G ++R+ A +A + + + L ++ VR L LRP LDD Sbjct: 255 HVGQVLTALRMEIGRIERMRAPADARLGAAVIECKTLVDDMFRTVRNLALGLRPSMLDDF 314 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L+ A+ +R++ G+ L D AL + R ++R QE L N V+HA A + Sbjct: 315 GLQAALEWHVRDLASR-YGVDVELTMTGDFDALPDRYRTCVYRAVQEALTNCVRHASARS 373 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRV 491 +T+ E+L + DDG GL + G GL G+ ERV L G++ I GT++ Sbjct: 374 ITVTVTSNGEQLEAFVADDGVGLDQSRRRNGLGLRGIEERVRDLNGSMTIDALSGKGTKL 433 Query: 492 SVSLPQ 497 ++ LP Sbjct: 434 AIRLPL 439 >UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Burkholderia RepID=A3NKQ6_BURP6 Length = 492 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 7/231 (3%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 + + +L+ + L+ + E + +ARELHDD+GQ +TA++ +V Sbjct: 254 VTDRKRDEDALRVSREELRRLSAHIQSIREEEKTRIARELHDDLGQQLTALKMAVTLVDN 313 Query: 333 LAADNASVKQSGQL--IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 D ++ +L + L + D+VRR+ LRP LDDL L AI L E Sbjct: 314 ELKDAGWASRTSRLPNVYALIGQLLDSVRRIAADLRPVMLDDLGLMAAIEWLTHEFVERY 373 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 R I D+ A + +FR+ QE L N+ +H++A+ VTL + + ++ I Sbjct: 374 R-IPVTSRIEADDIAFTRGSATEVFRIVQEALTNVARHSEATEVTLDIIRDEPNCIVRIA 432 Query: 451 DDGSG--LPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 D+G G + GL GMRER LGG + I G ++ +LP Sbjct: 433 DNGCGTARDTRPNRHSLGLLGMRERAARLGGEIRIDTAPGRGFALTATLPL 483 >UniRef50_A5FQU4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU4_DEHSB Length = 363 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 6/230 (2%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-Q 331 I LR++ +L++ R + L+ L++ E R+ +A+E+HD +GQ +T ++ + Sbjct: 128 ISHLRDIELALRESNKRLKELSNHLVQARELERKALAQEIHDQLGQALTGFNIDVSLIIK 187 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 R + + +S + + V+R+ LR + LDD+ L ++ L + + Sbjct: 188 RSKNLDPEIYKSAMCLSEKIQLTIQDVKRIATELRSQILDDMGLVASLEWLSEDFQ-RRT 246 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 GI E + V LFR+CQE L NI++H+ A+ V ++ + ++L+ I+D Sbjct: 247 GIKCWTEIHPKDLKTDPILSVNLFRICQEALTNIIRHSHATTVVIRLYMTPDQLIFQIKD 306 Query: 452 DGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 +G G+ FG+ G++ERV LGG L I + GT + + LP Sbjct: 307 NGIGINMKLIDKNDSFGILGIKERVCMLGGRLKIKGVLNVGTSIVILLPL 356 >UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Burkholderia RepID=B2TG29_BURPP Length = 370 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 12/255 (4%) Query: 256 LLSLLVQSLTGLLLG-AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 ++ V G LLG A I R + L+ L + + + E+ +R +ARELHD Sbjct: 112 VVITAVHDEQGDLLGFAKITRDMTERRRLED-LEHASAASALVQQARENEQRRIARELHD 170 Query: 315 DIGQTITAIRTQAGIVQRLAADN--ASVKQSGQLIEQLSLG---VYDAVRRLLGRLRPRQ 369 D+GQ ITA++ + + A + + + + +++ + ++RR+ LRP Sbjct: 171 DLGQQITALKMTLALHETELARHFSEAGRARLGSVREMADQLDAMATSMRRIAADLRPPM 230 Query: 370 LDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHA 429 LDDL LE A+ + E + G+ E D L++ ++L+RV QE L N+ +HA Sbjct: 231 LDDLGLEAALEWMTEGFE-QRYGVPVRCEISPDVLCLNDLAAISLYRVIQEALTNVARHA 289 Query: 430 DASAVTLQGWQQDERLMLVIEDDGSGLP--PGSGQQGFGLTGMRERVTALGGTLHISC-- 485 A+ V + D L I DDG GLP P FGL GMRER++ LGG L + Sbjct: 290 RANEVFVTLSADDRHYHLQIHDDGVGLPKAPAPRADCFGLLGMRERISQLGGVLSVDSIP 349 Query: 486 LHGTRVSVSLPQRYV 500 G ++ +P V Sbjct: 350 GRGVTITARVPLARV 364 >UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6J2_9PROT Length = 355 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 109/240 (45%), Gaps = 11/240 (4%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 GL + +L E+ L + + + + + + +E R +ARE+HD+IG +TAI+ Sbjct: 100 GLAVNVTKAKLDEIE--LLRSQQQLREFSSHIQDAKEQERLRIAREVHDEIGGLLTAIKM 157 Query: 326 QAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 + +RL + IE + A R L LRP LD + AI Sbjct: 158 DLAWIKERLPKSKKILTDKTSAIENMVGKAMTAARNLAHSLRPGYLDSFGIVAAIEMEAS 217 Query: 385 EMELEGRGIVSHLEWRIDESAL---SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 E E + GI L +E + + LFR+ QE L NI+KH+ A+ V + Sbjct: 218 EFE-QRTGIKCLLAHNEEEDEELELHPDVSIALFRIFQEALTNIMKHSRANKVEVLIHNS 276 Query: 442 DERLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 E + L I D+G G S + FGL G++ERV GG + IS GTRV V +P Sbjct: 277 QEHIELTISDNGCGFSQDARSKPRSFGLRGIQERVAHFGGEVSISSTPEQGTRVYVKIPH 336 >UniRef50_B8FDP4 Histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP4_DESAA Length = 610 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 9/229 (3%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAA 335 + ++LQ +R Q+L+ +L+ T+E RR +A ELHD IGQ++TA++ I+ + Sbjct: 378 EQTAKALQASESRLQNLSSKLILTQEEERRQLAIELHDGIGQSLTAVKFSVDNILLNIDN 437 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 + +V+ + Q+ VRR+ LRPR LD+L + I RE + I Sbjct: 438 PDLNVRDITKTASQIIKASIADVRRMQVELRPRILDELGIIATINWFCREFKSIYTHINL 497 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 ++ ++E +S + +FR+ QE NN K+ + ++L ++D RL L I D+G G Sbjct: 498 NINVDVEEEQVSAQLKPAVFRIIQEAFNNAAKYFEGDEISLSFTERDGRLHLEIRDNGIG 557 Query: 456 LPPGSG------QQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 +G GL MRER G L I G + S P Sbjct: 558 FDLDEVLSSRELNRGLGLDSMRERAELCNGHLEIISSKGQGATIKASWP 606 >UniRef50_A0LN82 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LN82_SYNFM Length = 394 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 8/237 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + I+ + Q L++ ++ + L+ +L+ T+E R+ +A E+HD IG T+TAI+ Sbjct: 157 LQSEIEERKRTEQKLRRSESQLRFLSSQLIRTQEEERKRIALEVHDSIGSTLTAIKFSLE 216 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 + A D +V ++ + + + R+++ LRP LDDL + + R+ + Sbjct: 217 HIVSEAKDAPAVCEALKTPISFTQIAIEESRKIMNDLRPAVLDDLGISATVGWFCRQFQS 276 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I +E + E ++ +FR+ QE +NI KH+ A V + + L L Sbjct: 277 IHPAIRIERRVEANEEEIPEPLKIVVFRIMQEAFHNISKHSRADLVRVSLTVKGGALRLT 336 Query: 449 IEDDGSGLPPGSGQ------QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 IED+G G + + + GLT M+ER GG+ + GT V P+ Sbjct: 337 IEDNGVGFNVKALRRKEGQIRRLGLTSMKERTELSGGSFTLKSRTGGGTTVEAFWPK 393 >UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinase n=3 Tax=Nitrosomonas RepID=Q0AF09_NITEC Length = 498 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 16/277 (5%) Query: 226 YGWQGALIATLMNAIA-LIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 + W+G + A + + T R P +L G++L I R +++ + Sbjct: 217 WNWEGRIQARGDADVKWISLRATPRRTPRGAVLW------DGIMLN--ITRNKQIELEIA 268 Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQS 343 + A+ + L+ + +E R +ARE+HDDIG T+TAI+ + + + + Sbjct: 269 RSRAQLEELSAYSQKAKEQERTRIAREIHDDIGGTLTAIKCELVPCLDNSSRAPEFYRNK 328 Query: 344 GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 +E L V D+ RR+ LRP LD + A++ RE + GI + +E Sbjct: 329 AAAVESLVDMVIDSTRRIALDLRPGVLD-CGIVAAVQWQAREFN-QRTGIACAVVCDDEE 386 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL--PPGSG 461 +L + V +FRV QE L NI KHADAS V ++ + + L + D+G G+ P Sbjct: 387 ISLDGDLAVAIFRVFQEALTNIAKHADASEVRVKLSEASGEVYLEVADNGCGITYPDMEK 446 Query: 462 QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 FG+ MRER LGG HI GT V + +P Sbjct: 447 VNSFGIRSMRERCQQLGGRFHIQGEPQTGTGVMIWIP 483 >UniRef50_Q24Z69 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Z69_DESHY Length = 269 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 5/215 (2%) Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 K A L++ +E + ++RELHD +GQ +T++ + +Q + V Sbjct: 50 KSRADQDAALRALIQLQELENKRISRELHDSVGQALTSLLLRIRAIQN-KEEATEVFDQL 108 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 + + L+ + VRR+ LRP L++L L AI + + + GI + Sbjct: 109 EELYHLTTETMEEVRRISLNLRPLALENLGLVDAIYWYVENFQ-KNTGIEVVFRSSASKR 167 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG 464 L + +T++R+ QE L N+ KHA A V + ER+++ I DDG G+ +G Sbjct: 168 TLPKEIELTIYRIVQEALTNVSKHAQAQHVAITIG-GSERVLMSIRDDGKGIDRAKKTEG 226 Query: 465 FGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 GL GM ERV LGGTL I GT + V +P Sbjct: 227 LGLLGMSERVRLLGGTLSIQGGEAEGTSILVEIPL 261 >UniRef50_Q11VH8 Sensor histidine protein kinase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH8_CYTH3 Length = 525 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 9/226 (3%) Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 +L++ ++ + ++ +LE +E RR +ARELHD +GQ +TA++ ++ + Sbjct: 298 DLSEKFRQSVTEHKIRTTSVLEGQEHERRKIARELHDGLGQMLTALKFNIQGMKTPSTKK 357 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG-IVSH 396 + I+QL VRR+ L P L+D L A++ L + G I Sbjct: 358 EQA--HVEGIKQLIQETILEVRRISFDLMPSVLNDFGLAAALQHLSERFTISGTKQISIE 415 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 D +N + +R+ QE LNN +K+A+A+ +TL R+ I+D+G G Sbjct: 416 YVGVKDIGRFGKNVEINTYRIVQEALNNAIKYAEATKITLDLQFDSNRIQFSIQDNGKGF 475 Query: 457 PPGSGQQ----GFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 P ++ G G+T +RERV+ L G L + GT ++V +P Sbjct: 476 TPHDKKKADGSGRGMTNIRERVSLLNGNLIFNSIIEEGTTITVEIP 521 >UniRef50_C5CVV4 Histidine kinase n=2 Tax=Burkholderiales RepID=C5CVV4_VARPS Length = 456 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 114/251 (45%), Gaps = 17/251 (6%) Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 L L V S TGLLL R E A+ + LA R+++++E R +ARELHD Sbjct: 211 LCLGVVSATGLLLNLSEHRTAE---------AKLRLLARRVVQSQEEERGHLARELHDGT 261 Query: 317 GQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 QT+ + + V L + + Q VRR+ RLRP LD L L Sbjct: 262 SQTLVSAKLLIESAVDALDRERQPAPPALSKALQRLNDSLIEVRRISHRLRPALLDTLGL 321 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 A+ L E EG I + + + LS+ + LFRV QE L N+ KHA A V Sbjct: 322 PAALERLGDEFAEEG-AIDASIMIEGEAFELSQEAKTALFRVTQEALTNVRKHAQAHRVH 380 Query: 436 LQGWQQD-ERLMLVIEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISC-LHGT 489 + D + + L I DDG G + ++G GL MRER+ ++GG L + GT Sbjct: 381 IALGFSDEDGVRLSIGDDGVGFDVEAMQLDARRGIGLRNMRERMESIGGRLDVQSGEGGT 440 Query: 490 RVSVSLPQRYV 500 + +P R Sbjct: 441 TIVAEVPARSA 451 >UniRef50_A9KLX5 Histidine kinase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLX5_CLOPH Length = 366 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 15/298 (5%) Query: 210 FTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLL 269 F+P+ + I + L L N I L+ + L+LS L T LL Sbjct: 68 FSPYEDSKKIKEEDYIKKELEQLKDNLPNIINLLEQHYDLKNKYQLILSCL----TNLLD 123 Query: 270 GAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 I ++ +EL ++ L ++LE +E R+ +A +LHD Q +T++ + + Sbjct: 124 RQHIDLKAFESEVCTEELINHEALGLKILEAQELERQRIAMDLHDSTVQNLTSLVHKTEL 183 Query: 330 VQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +L D K + + + + +R ++ LRP L+DL L+ AI + + Sbjct: 184 CIKLFDLDAIRAKLELATMIENIRTIINDMREIIYDLRPMTLNDLGLKAAIERYVDNFK- 242 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I + + ++ +T++R+ QE NNI KHA A+ + Q++E + L Sbjct: 243 RHNKIQVIISIDENFEIKNQVVSITIYRIIQEAFNNISKHAKATTCIIDLSQKEEVIQLT 302 Query: 449 IEDDGSGLPPGSGQQ-------GFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 IED+G GL S + GFGL+ M ERV L G + + GT++ VS+P Sbjct: 303 IEDNGIGLEESSKCKDTTCKNCGFGLSNMSERVYLLSGKFSLESNNNSGTKIIVSIPC 360 >UniRef50_B1ZVP9 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZVP9_OPITP Length = 521 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 13/232 (5%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L I +E + ++ AR Q L+ RLL +E RR +ARELHD +GQ +T +R + Sbjct: 288 LEGEIGVRKEAERRAEENAARLQALSNRLLTVQEDERRSIARELHDQVGQLLTGLRFRLE 347 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +R D +++ ++ + ++L VR + +LRPR LDDL L A+ + Sbjct: 348 ATRR---DPSALTEALAVTDELIRT----VREMTLQLRPRMLDDLGLRPALEWHVDRFRQ 400 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + GI L+ + E L T++R+ QE L NI +HA + + + D+ L + Sbjct: 401 Q-TGIAVELDIALPEQRLPAVLETTVYRIVQEALTNIARHAGSPSAVVTVAADDQALHVE 459 Query: 449 IEDDGSGLPPGSG---QQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSL 495 I D G G + GL G+ ERV GG L + GTR+ Sbjct: 460 ISDRGRGFDTAAALAKHNSIGLAGLAERVRLAGGELELFSQPGQGTRIHAEF 511 >UniRef50_A1HU07 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU07_9FIRM Length = 478 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 11/240 (4%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 + A L++ L+++ HL ++++ +E R+ +ARELHD+ GQT+ ++ Sbjct: 226 AVAFNAMADYLQQTMDELKQKEEARTHLLQKVIVAQEEERKRIARELHDETGQTLASLMM 285 Query: 326 QAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 + ++ + + + DAV R+ LRP LDD+ L A+ + + Sbjct: 286 GLKCLAATCPESERGCR-LEEMRLAVKKTIDAVHRMAIELRPSILDDMGLIPAVEKYVND 344 Query: 386 MELEGRGIVSHLEWRID-ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 GI + L + E L VT++R+ QE L NI K+A A V + Sbjct: 345 FR-HNYGIDTDLHIQWQCEKRLVHEIEVTVYRIVQEALTNIAKYAKADNVCIIMTCDRRG 403 Query: 445 LMLVIEDDGSGLPPGS------GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 L +++EDDG G + GL GM+ER T +GG L I GT + + +P Sbjct: 404 LEVIVEDDGVGFDADAILQQSVAGTQLGLFGMQERATLVGGALTIESTPGRGTTLFLRIP 463 >UniRef50_D1ABJ2 Histidine kinase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ABJ2_THECD Length = 373 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 12/281 (4%) Query: 229 QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA 288 +GA + L + A IA R L + + L + R L + ++E + Sbjct: 92 RGAALPVLADRRATIAVIDVRSAGPCRQEDLDLVTALAALFAPVLHSCRRLRNAQEREHS 151 Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQL-- 346 + AER +E +E+ R + R++HD I Q + ++ ++ A A+ + QL Sbjct: 152 AER-FAERAVEVQEAERARLVRDIHDGIAQRLASLGFHLSACEQALAQGATAEAQAQLGL 210 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID-ESA 405 +L R +G LRP LDDL L A+ +L RE + + + E A Sbjct: 211 ARELCDLAAAETRAAIGGLRPPVLDDLGLTAALATLAREAGSRQPSLDVTVTVSGELEDA 270 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG------LPPG 459 L ++ + L+R+ QE + N ++HA AS V + D+R+ L + DDG G G Sbjct: 271 LPDHIQTALYRIAQEAVGNCLRHAKASVVHVLLEHDDDRVRLRVSDDGVGFSIQDVFAAG 330 Query: 460 SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 +GL GM ER LGG +HIS GT V +P R Sbjct: 331 RRPDSYGLRGMSERAELLGGRVHISSRPGGGTTVEALVPLR 371 >UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax=Chloroflexus RepID=A9WAP8_CHLAA Length = 491 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 12/240 (5%) Query: 269 LGAGIQRLRELNQSL---QKELARNQHLAER----LLETEESVRRDVARELHDDIGQTIT 321 +G ++++L ++E A +HL + ++ +E R+ +ARELHD Q +T Sbjct: 239 IGQLTDAFNAMSEALAQAERERAEREHLRAQYVTQIITAQEEERKRIARELHDSTSQALT 298 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 ++ + + Q + + + + + L +LRP LDDL L A++ Sbjct: 299 SLLVGLRSLADRHRSPE-IAQQVDDLRSIVGQILNDLHALARQLRPSVLDDLGLAAALQR 357 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 + E I+ +D+ L L+R+ QEGL NI++HA AS ++ ++ Sbjct: 358 YVAECRARSGLIIDLALPGLDDFRLDPVVETALYRIVQEGLTNIIRHAHASTASVVIERR 417 Query: 442 DERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +R+ +IEDDG G P + G GL G+RER L G L I GT + V +P Sbjct: 418 ADRVRAIIEDDGCGFDPNALHGDGHLGLNGIRERAALLNGQLIIESSPGSGTTLYVEIPL 477 >UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C419_SPHTD Length = 437 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 13/334 (3%) Query: 176 SQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIAT 235 P + L ++L ++ L + F +P ++ T Sbjct: 86 MTPGHILVFFLGEAVMLGTLAWLDASFLVMSFAIFVQLFAFIPPTWATAGVIALTLILFT 145 Query: 236 LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 A+ + + S++ ++ A ++ +E + + + +A LAE Sbjct: 146 RDAALDGQYLWENEGALLGAVFSVIFTIISIFFFAAITRQSQERKRLIDELMATRAALAE 205 Query: 296 RLLET-EESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLG 353 R + R+ +ARE+HD + Q T+I + + A+ ++++ + + Sbjct: 206 RERQAGVIEERQRLAREIHDTLAQGFTSIVMHLEAAEPHIPAEATALRRHVEQARATARD 265 Query: 354 VYDAVRRLLGRLRPRQLDDLT-LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 + RRL+ LRP QL+ L A+ + E GI +H+ L + V Sbjct: 266 SLNDARRLVWALRPEQLEQGGSLADALARVAERWS-EDTGITAHVTVDGTPVPLPPDVEV 324 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP-------PGSGQQGF 465 TLFR+ QE L N+ KHA A V + D+ ++L ++DDG G PGS GF Sbjct: 325 TLFRITQEALANVRKHAQAGRVDITLSYLDDEVLLDVQDDGVGFDRATVSATPGSVNGGF 384 Query: 466 GLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 GLTGMRER+ LGG+L I GT ++V+LP Sbjct: 385 GLTGMRERLRLLGGSLMIESAPGEGTSITVALPL 418 >UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV3_9PROT Length = 401 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 11/239 (4%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L I + ++ L + + L+ + +E R +ARE+HD+IG +TA++ Sbjct: 160 LVVNITQNKQAEIELVHSRQQLRELSSHIENIKEEERTRIAREIHDEIGVLLTALKMDLA 219 Query: 329 IV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + QR +D+ ++++ Q++ L A L+ LRP LD + AI E Sbjct: 220 WMRQRFPSDDGALQEKSQVMANLLDTAGIAANNLVHSLRPGSLDCFGIVAAIEIEATEFT 279 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ-----D 442 + D +S+ Q +TLFRV QE LNNI+KHA A V ++ Q D Sbjct: 280 KR-TATPCKIIKSSDNLDVSDEQSITLFRVFQETLNNIMKHAQARRVQVKISQSATDQID 338 Query: 443 ERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + + L++ DDG G + + FGL G++ER+ L GTL I+ GT+++V LP+ Sbjct: 339 KYVELIVSDDGCGFDEAARNKPRSFGLRGIQERIRQLDGTLSITSRPGKGTKIAVRLPK 397 >UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobacter formigenes RepID=C3XBQ9_OXAFO Length = 225 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 6/216 (2%) Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASVKQSGQ 345 + L + E R+ +ARE+HD++GQ + A+R + ++++ D + Sbjct: 10 EEELRELIDHQERIREDERKRIAREIHDELGQRLLALRIEVTLLKQETFDSREKRSERID 69 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 + +VR L+ LRP LD L L ++ ++ GI E + Sbjct: 70 EVLGQLDSTVKSVRNLINNLRPAVLD-LGLVASLDWQAKDF-TRRNGIECVFETHDENLE 127 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--Q 463 + + + LFRV QE L NIVKHA AS V+++ D+ L+L I D+G G+P + + Sbjct: 128 VDDERATVLFRVLQEALTNIVKHAKASKVSVKLDGNDDTLVLKISDNGIGMPKVRNRKIK 187 Query: 464 GFGLTGMRERVTALGGTLHISCLH-GTRVSVSLPQR 498 +GL G+RER+ L G I+ GT ++ +P + Sbjct: 188 SYGLAGIRERIGMLNGEFRIATGDTGTTLTFRIPLK 223 >UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF1_JANMA Length = 626 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 8/235 (3%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L + I + E L++ + LA+R + E R+ +ARELHDD+ Q ++A+R Sbjct: 392 LAISRNITSIIEAENQLRQSQKLLRQLADRSETSIEDERKHIARELHDDLAQHLSALRMN 451 Query: 327 AGIVQRLAADNASV--KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 +++ +S Q+ +IE+L R ++ LRP LD + + QA+ L++ Sbjct: 452 VSVMKLEFGHLSSAFSGQAETMIERL-DATIKIARNVITALRPTALD-MGIVQALEWLVK 509 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 + + I L + LS+ +FR+ QE L NI +HA+A V + +D Sbjct: 510 DFST-HKEISCRLHIHDENLILSDRSATAIFRIAQESLRNISRHAEACNVDVNLSHKDGM 568 Query: 445 LMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 +L I DDG G + FGL G++ERV LGG + I GT + V++P Sbjct: 569 CLLAIRDDGRGFNTTNVPFNSFGLMGIKERVLILGGKVEIESEEGQGTTIRVNIP 623 >UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV68_METML Length = 499 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 9/246 (3%) Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 +L+ V G+++ + +L LQ+ L + + +E R +ARE+HDD Sbjct: 256 VLADGVVQWVGMMINITQSKNEKLE--LQESRHELAQLTAHMNQIKELERTRIAREIHDD 313 Query: 316 IGQTITAIRTQA-GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 +G +TAI+ I+ R+A + + +E + ++A+ ++ LRP LD L Sbjct: 314 LGGNLTAIKIGLTSIINRIATGLPVSFEQAKGLESIVDNTFEAIHKISSDLRPNILD-LG 372 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 + A+ +E E + G+ + ++ +Q +TLFR+CQE ++NI KHA+ASAV Sbjct: 373 IVAALEWQAKEFEKQV-GVTCTFTTNQADIVVTPDQAITLFRICQESMSNIAKHANASAV 431 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHIS--CLHGTR 490 + +++ I D+G G+ FGL GM+ERV AL G+ I GT Sbjct: 432 HVDLNLHYGEIIMKISDNGIGINTADTYKPNSFGLRGMQERVAALYGSFDIEQLAGQGTV 491 Query: 491 VSVSLP 496 ++V+LP Sbjct: 492 IAVTLP 497 >UniRef50_B2AKD3 Putative multi-sensor signal transduction histidine kinase n=1 Tax=Cupriavidus taiwanensis RepID=B2AKD3_CUPTR Length = 608 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 6/231 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + + L R Q L E R+ +A E+HD++GQ +TA++ Sbjct: 370 LELEVSERKWTELELLASRERLQQLHAHQEAIREEERKCIAMEIHDELGQLLTALKMDLS 429 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++ + V Q + + +L VR ++ LRP L + L A+ L + Sbjct: 430 LLSMQLPTGSGVIQKAEEMRELIEQTIRIVRNVVSHLRPTAL-NYGLASALEWLAADFS- 487 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I + E L + + +FR+ QE L N+ +HA AS V + D + ++ Sbjct: 488 RHTKIPCRFQSTHPEPNLPDPRATAIFRIVQESLTNVARHAKASQVDVTLANTDAGIEVI 547 Query: 449 IEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 I D+G G S + G +GL GM ER +G L + GT + + L Sbjct: 548 IRDNGQGFNVVSARAGYSYGLHGMAERARLIGAQLEVHSKPDRGTLIRLRL 598 >UniRef50_UPI00016AFAA4 response regulator/sensory box histidine kinase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA4 Length = 672 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 12/243 (4%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 + + A I + ++L+ + L+ + + E +ARELHDD GQ +TA++ Sbjct: 427 ISVVADIAERKRAEEALRISREELRRLSAHIQKIREEEMARIARELHDDFGQQLTALKMA 486 Query: 327 AGIVQRLAADNASV---KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 +++ + I L + ++VRR LRP LDDL L AI L+ Sbjct: 487 VTLLEHKKPAGPERLISRNDLSSIYALIDQLINSVRRFAADLRPAMLDDLGLIPAIDWLI 546 Query: 384 REMELEGRGIVSHLEWRIDESALSENQR--VTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 E H+ ID A+ N+ V +FR+ QE L N+ +H+ A+ V + + Sbjct: 547 EEFSARYH---VHVTRHIDAQAIHFNRESRVGVFRIVQEALTNVARHSAATEVVIDITRD 603 Query: 442 DERLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGG--TLHISCLHGTRVSVSLPQ 497 D ++ I D+G G G++ FGL GMRER LGG + S G ++V+LP Sbjct: 604 DSHCIVRIADNGRGAVRDSSLGRRSFGLLGMRERAALLGGDTQIRTSPGAGFVLTVTLPL 663 Query: 498 RYV 500 V Sbjct: 664 AAV 666 >UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GSY8_9BURK Length = 512 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 6/229 (2%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 I ++ + LQ + + + E R +ARE+HDD+G ++T ++ + + Sbjct: 276 ISDRKQAEERLQNAQTELRLVTTEFEKRREQERGAIAREIHDDMGGSLTKLKADVAWLNK 335 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 ++++++ + +L + + +R+ LRP LD L A+ M + + + Sbjct: 336 NLTADSAIQEKLDDMLELIEHLLASSQRIAKDLRPGILD-YGLIPALEWQMNDFQKRTQ- 393 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I + ++E L Q LFR+ QE L NIVKHA A+ V ++ + + L L I D+ Sbjct: 394 IEGTFQCNVEELDLDSEQSTALFRILQEALTNIVKHAQATRVDVELFVTESELTLEIRDN 453 Query: 453 GSGLPPGS--GQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 G G+ + FGL GM+ERV A G + +S GT V VS+P+ Sbjct: 454 GRGIENTDKLKETSFGLRGMQERVAAFEGWVDVSGSLGSGTTVMVSIPR 502 >UniRef50_C9PG27 Sensor histidine kinase n=2 Tax=Vibrio RepID=C9PG27_VIBFU Length = 458 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 17/253 (6%) Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 ++ + V + GL + R N+ L L ++++ ++E+ R+ V+RELHD Sbjct: 215 VVFIAVSVIAGLGASLNLNVRRMANEQL-------SQLNQQIINSQENERQRVSRELHDG 267 Query: 316 IGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 + Q + A + + VQR D + + + + +RR+ LRP QLDDL L Sbjct: 268 VNQLLVAAKYRIDNVQR-EQDEQRKQTELEASKAVMEHAIVELRRISRDLRPPQLDDLGL 326 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 I + + ++ + E ID + TL+RV QE L+N+ KHADAS V Sbjct: 327 VAGIEAYLNDLR-RRTDLELVFEHDIDGVEMVAEVETTLYRVVQESLHNVEKHADASGVD 385 Query: 436 LQGWQQDERLMLVIEDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISCL--H 487 + ++ L+L I DDG G+ + Q GL M+ERV A+GG +S Sbjct: 386 VVMQREGRLLILTISDDGKGITKERLKQKTAPQDHMGLQNMKERVQAIGGQFSVSSEVGE 445 Query: 488 GTRVSVSLPQRYV 500 GT + VSL +V Sbjct: 446 GTEIRVSLDMEFV 458 >UniRef50_UPI0001692E35 hypothetical protein Plarl_02603 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E35 Length = 277 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 9/237 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + + +L + LQ++ L +LL +E R+ ++RELHD+ Q +T+ Sbjct: 27 LISSNTEIEKLLKELQEKERLRDTLILKLLSAQEDERKRISRELHDETSQALTSFMVTMR 86 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++ A D A ++ +++ + +R L LRP LDD+ L AI+ +++ E Sbjct: 87 VLANEAKD-AEQQELLNTSREIAASILREIRDLAVELRPPILDDMGLIPAIKKYIQKFE- 144 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 E GI L ++ A+ V L+R+ +E L N+VKH A+ + + D + L Sbjct: 145 EKYGIAVVLSAPEEDIAIDSRTAVALYRILRESLTNVVKHTAATRIVIGLRLADHCIQLT 204 Query: 449 IEDDGSG-----LPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 + D+G G Q GL GM+ER LGG+ + GT + VS+P + Sbjct: 205 VHDNGHGIQQEDFERARRQNRIGLYGMKERAELLGGSFFVRTTNIGGTELIVSIPLK 261 >UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TQ72_RICCO Length = 249 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 5/230 (2%) Query: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 ++ + ++Q LQ+ + + L+ L E R +ARELHDD+GQ + ++R Sbjct: 21 IILRDVTERHMVHQKLQRSRDQLRQLSAALQTIREEERTYIARELHDDLGQILASLRMDL 80 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++Q+ A ++ +E L ++RR+ LRPR LD+ L A++ L + Sbjct: 81 SLLQKDGTGTAEARRLMAGMESNLLTAIASLRRIATNLRPRALDEGGLYFALQGLRDDF- 139 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 +E GI + L E L + +FR+ QE L NI +HA+AS VT+ ++ + L++ Sbjct: 140 VERHGIPATLFADEAELRLDDAASTAIFRIVQEALTNIARHANASHVTMNLYRLNGELLI 199 Query: 448 VIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISC--LHGTRVSV 493 I DDG G+ + GL GMRERV A+ G + IS GTR+ + Sbjct: 200 QIRDDGRGIKAEDMEKAESLGLIGMRERVWAMNGDITISSEEPPGTRIDI 249 >UniRef50_Q62SG3 Two-component sensor histidine kinase n=4 Tax=Bacillaceae RepID=Q62SG3_BACLD Length = 359 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 4/259 (1%) Query: 240 IALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHL-AERLL 298 L + T+ VD+ +S V S G + + L++L ++E A+ L ++ L Sbjct: 87 YFLSSMPTYEGRFVDMEMSTAVISENGDQMEVLL-VLKDLTMKKKEEEAKISKLVLQKTL 145 Query: 299 ETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAV 358 E +E+ + +A+ELHD +GQ++ ++ +Q + K Q I V Sbjct: 146 EAQENEHKRLAQELHDGVGQSLYSVSVGIQAIQSRMEQEETFKDYMQDIIDELEKAIQDV 205 Query: 359 RRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVC 418 + +LRP LD L L A++ L+ + + + + L + L+R+ Sbjct: 206 KLYSLQLRPHSLDQLGLIPAVKHLVSSLNKTHQDVSITFASSDISNRLLPIFEINLYRII 265 Query: 419 QEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALG 478 QE L+N +K++ A+ + + +++D L+L+I+DDG G G ++G G M+ERV + Sbjct: 266 QEALHNALKYSQATLIEVILYKEDGELVLIIQDDGIGFERGLTEEGLGFKHMKERVDQMD 325 Query: 479 GTLHISCL--HGTRVSVSL 495 G+L I GT + V + Sbjct: 326 GSLRIHSALQSGTTIKVKV 344 >UniRef50_A1S6S1 Sensor histidine kinase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6S1_SHEAM Length = 1046 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 12/234 (5%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 A I++LR+ Q L+ ++LA RL +E R+ ++RELHD GQ++TA + + Sbjct: 814 AVIEKLRQNEQHLKSAFEGMRNLATRLQYAKEEERKSISRELHDQFGQSLTATQISLQLF 873 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 +R + + + VR + LRP LDD+ L + + +M Sbjct: 874 RRQHPGDPKL---IDTCITTIQAMIKQVRAISFDLRPSLLDDVGLVAGLHHQLNKMSSSL 930 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 D LS +TLFRV QE + N ++HA+A+ + ++ + +++ + Sbjct: 931 TH-PIIFNADTDIPELSPELTITLFRVIQESVTNAIRHANATRIEVKLYPDGDKIKAEVS 989 Query: 451 DDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLP 496 D+G G PG S GL G+ ERV + G L+I G +SV P Sbjct: 990 DNGVGFEPGGISAKVSKGGHLGLLGIEERVKSQNGNLNIKAIPHGGVSISVEFP 1043 >UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJC2_THIDA Length = 1168 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 16/278 (5%) Query: 224 WHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSL 283 + + W+G + A + + T P LL +V G++L +L EL L Sbjct: 892 YPWSWEGRIRAGSLGETWVSLRAT----PTLLLDGGVVWD--GIILNVTQTKLNELE--L 943 Query: 284 QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQ 342 ++ + L E R+ +ARE+HD++GQ +TA+R + V DN + + Sbjct: 944 RQSRESLRLLTAHREAVREDERKHIAREIHDELGQLLTALRMEVSAVGMAFGRDNPELDE 1003 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 + ++ + VR++ LRP LD L LE AI L E + + + Sbjct: 1004 KVRSMKTVINQTIQTVRQVATSLRPAALD-LGLETAIDWLASEF-CKRNAVECAVAIPG- 1060 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 E AL E + LFR+ QE L NI +HA A++V+++ E + L + D+G G P + Sbjct: 1061 EIALDEVRATALFRILQETLTNIARHAGATSVSIKLKTTGEEICLKVTDNGRGFDPEEAK 1120 Query: 463 QG--FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 QG FGL G+ ERV LGGT+ I G ++V +P Sbjct: 1121 QGGSFGLKGIAERVLILGGTMTIKSAPGQGAELAVCIP 1158 >UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N2_NITMU Length = 692 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 12/248 (4%) Query: 261 VQSLTGLLLGAGIQRLRE-----LNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 + + G LG ++ + + Q L+ A + A L E R+ +ARE+HD+ Sbjct: 406 LIDVIGDDLGRWLEHQQTEARVLVEQELRVRDAAIREFAAHLERMREEDRKYIAREIHDE 465 Query: 316 IGQTITAIRTQAGIVQRLAADN-ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 +GQ + A+ + +++ ++ + +L +V + LRP L L Sbjct: 466 LGQLLAALHLEISLLRSAKDHGSERLETIRHNMAELVEKAGQSVHNVAEHLRPASL-GLG 524 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 +E A+ L E + + GI L + L E+Q V +FR+ QE L N+ +H+ A+ V Sbjct: 525 IESALTKLTSEFK-KHTGIYCDLRLPEEPVNLDEDQTVAIFRIVQESLTNVTRHSGANRV 583 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLHGTR-- 490 ++ +++ + +++ I D+G G P S ++G FGL GMRER AL G + I+ G Sbjct: 584 EIRLFREKDEVIVEICDNGRGFDPESAKKGKSFGLVGMRERAAALRGYIAITSGPGQGAL 643 Query: 491 VSVSLPQR 498 V VS+P R Sbjct: 644 VRVSIPLR 651 >UniRef50_B1YLL4 Histidine kinase n=2 Tax=Exiguobacterium RepID=B1YLL4_EXIS2 Length = 390 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 10/245 (4%) Query: 260 LVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQT 319 ++ S ++L ++ +N+ +K + + Q + ++ ++ E+ RR ++R++HD QT Sbjct: 137 MLISRVSVVLNFLTDDMQVMNEKYEKAM-QKQEMGLKVFQSAENERRRLSRDMHDGPAQT 195 Query: 320 ITAIRTQAGIVQRLAADN--ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQ 377 + + +A +++++ N + + + +L +RR++ LRP LDDL Sbjct: 196 LAHVLIRADLIEKIHQHNGAEAAFEEIHRLRKLIRDGLADIRRIIYDLRPMTLDDLGFVP 255 Query: 378 AIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ 437 + +R M+ E I H + + V +FR+ QE + N VKH+ A + + Sbjct: 256 TLERYLRHMQ-EISNIPIHFNYLGGGERIESTYEVAVFRIVQEAVQNAVKHSKAVDIRII 314 Query: 438 GWQQDERLMLVIEDDGSGLP----PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRV 491 Q + + ++D+G G S + FGL GMRER+ + G I GT + Sbjct: 315 IEQYQHSVRIHVKDNGIGFDFNSIVESCDESFGLIGMRERIELIDGEFEIETQPGKGTVI 374 Query: 492 SVSLP 496 V +P Sbjct: 375 KVRIP 379 >UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4J6C1_DESRM Length = 379 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 9/219 (4%) Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS-VKQSGQ 345 L Q L ++ +E R+ VARE+HD Q++ I +A +L N S V Sbjct: 160 LHDMQQLGISIIRAQEEERKRVAREIHDGPAQSMANIVMRAEFCLKLLEMNPSMVGNELV 219 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 ++QL VR+++ LRP LDDL L A++ + + +++ I + + E Sbjct: 220 SLQQLVRQSLQDVRKIIFDLRPMVLDDLGLIPAVKRYLEDYKVQN-NISADFVFIGKEQR 278 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-----PPGS 460 + V +FR+ QE L NI KHA A V ++ R+ + I+DDG G P Sbjct: 279 FDASMEVAVFRIIQEALINIKKHAAARHVLIKMELISSRINVYIKDDGCGFVVGHIKPRG 338 Query: 461 GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G+GL GMRER+ L GTL I+ GT ++ SLP Sbjct: 339 DGSGYGLLGMRERIQLLKGTLSINSTPGKGTELNFSLPL 377 >UniRef50_P54663 Sensor protein degS n=33 Tax=Bacillales RepID=DEGS_BREBE Length = 386 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 5/215 (2%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 LR++ ++L+ + Q ++++ +E RR ++RE+HD Q + + ++ +V+R+ Sbjct: 158 LRQVGEALEDAREK-QAFGLQIIQAQEEERRKLSREIHDGPAQMMANVLLRSELVERIYH 216 Query: 336 DN--ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 D + + + ++ VRR++ LR LDDL L ++ ++ E E GI Sbjct: 217 DKGIDEALKEIRDLRKMVKSSLAEVRRIIYDLRRMALDDLGLIPTLKKYVKTFE-EHTGI 275 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 + E+ + LFR+ QE L N KHA AS V ++ +Q + +VI+D+G Sbjct: 276 FVDFKHIGKGERFPEHVEIALFRLVQEALQNTRKHAKASHVHVKIEEQKTKFTVVIKDNG 335 Query: 454 SGLPPGSGQQG-FGLTGMRERVTALGGTLHISCLH 487 G ++G FGL GM+ERV L G L I Sbjct: 336 KGFDQTEKKEGSFGLVGMKERVNMLKGQLVIRTKP 370 >UniRef50_C3RLD8 Two-component system sensor histidine kinase n=3 Tax=Bacteria RepID=C3RLD8_9MOLU Length = 439 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 139/294 (47%), Gaps = 11/294 (3%) Query: 208 SRFTPFCLALPIIAL-AWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTG 266 S + +P+++L ++ + A ++ A ++ S + V ++ L+V Sbjct: 150 SNYDIISNIIPMVSLDSYIQVYDAATKTAILIAKNILEST----NLVLFIMFLIVYIANQ 205 Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 + I + + + K+L + E++ E+ + R+ +ARE+HD +G +T I Sbjct: 206 IRENENISKELSMINEVNKQLKDYAAVTEKIGES--NERKRLAREIHDTLGHALTGIAAG 263 Query: 327 AGI-VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 + + D KQ ++ ++ VRR L +LRP L++ TL++AI+ +++E Sbjct: 264 IDACIAMIDIDPNVTKQQLLVVSKVVREGISDVRRSLNKLRPGALEEHTLKEAIQKMIKE 323 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 + + L++++D+ + +FR+ QE + N ++H A V + +Q+ L Sbjct: 324 FS-DVSEVEIMLDYQLDKVDFENTKEDIIFRIVQESITNALRHGRAKKVEINIYQRVSDL 382 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRY 499 +VI D+G G + G+GL M+ER L G L G V V++P + Sbjct: 383 EIVIADNGVGCD--DLKLGYGLKQMQERAAILNGRLEYYSKEGFTVKVTIPMKE 434 >UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BTT3_9GAMM Length = 732 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 9/234 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 I L++ + L N+ L R + +E + +A ELHD+ GQ ITAI+ A + Sbjct: 467 QDISELKQAQAETLRLLEENRFLIHRSMAIKEEELKRLAYELHDEFGQCITAIQADAETI 526 Query: 331 QRLAADNAS-------VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 LAA + S I ++S YD V L+ +LRP LD+L L +A+R L+ Sbjct: 527 VDLAARKQQQPIILNKINLSANAILEVSSHAYDVVHSLMQQLRPSGLDELGLVEALRDLV 586 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD- 442 + + + L E + ++RV QE L NI K+A AS V+++ Sbjct: 587 STWQARHKKTRCIFRATGELHHLGETINIQVYRVVQECLTNIAKYAQASHVSIKLTVDSV 646 Query: 443 -ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 + L+L ++D+G G+ ++G GL GMRER TAL G L + G V ++L Sbjct: 647 KKILILCVQDNGQGMNLTQYKRGLGLIGMRERATALEGNLQLESALGDGVQITL 700 >UniRef50_C9RTT5 PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Geobacillus RepID=C9RTT5_GEOSY Length = 339 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 4/270 (1%) Query: 232 LIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQ 291 LI+T L T+ H +D+ +S + + + + ++E+ ++ Sbjct: 63 LISTEEVPYFLSEMPTYHGHLIDVEMSTALILEQDGAKYYLLVLRDQTVKKKEEEVLHSK 122 Query: 292 HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLS 351 + ++L E +E + +A+ELHD +GQ++ +I + + D + + + + Sbjct: 123 WMVKKLTEAKEEEHKRLAQELHDGVGQSLYSISIALDNIIQRIQD-EKLHAYVKEVREEL 181 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 V + V+ +LRP+ LD L L I+SL+ + + + L+ + + LS Sbjct: 182 GRVMEDVKLYAQQLRPKSLDALGLIPTIQSLIHSFQSKMPNMSFSLQTNV-YTRLSPTVE 240 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMR 471 + L+RV QE L+N++KHA A+ V + + + L + I+D+G G ++G GL ++ Sbjct: 241 INLYRVIQEALHNVMKHAKATEVCITIERVGQELHVSIKDNGVGFEVEEKREGLGLKHIQ 300 Query: 472 ERVTALGGTLHISCLH--GTRVSVSLPQRY 499 ER++ LGG I+ GT + V +P Sbjct: 301 ERISHLGGETIITSAPMKGTTIFVCVPIEG 330 >UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinase n=17 Tax=Pseudomonas RepID=A4XZI6_PSEMY Length = 801 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 9/235 (3%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G+L +L EL +L AR + L+ L E + +ARE+HD++GQ +T ++ Sbjct: 563 GILWDITENKLAEL--ALADSRARLRELSAHLESVREEEKARIAREVHDELGQVLTVLKL 620 Query: 326 QAGIVQRLAADN-ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 + + + A + + +++L ++ VR + LRP LD + AI +R Sbjct: 621 ETAMCELACAGQVPELDERLASMKRLIAQLFQLVRDVATALRPPILD-AGIASAIEWQVR 679 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E E I +E L + Q + LFR+ QE L N+++HA A +V ++ WQ++ Sbjct: 680 RFE-ERTQIPCLVEVPEHLPRLPDAQAIGLFRILQEALTNVMRHAGAHSVVVRLWQEEGG 738 Query: 445 LMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 L L + DDG G + G FGL GM+ER+ LGG L I GT + + Sbjct: 739 LCLSVSDDGKGFDAAMRKPGQSFGLVGMQERMLMLGGQLQIDSRPGEGTTLYARI 793 >UniRef50_Q60AR7 Sensor protein n=1 Tax=Methylococcus capsulatus RepID=Q60AR7_METCA Length = 439 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 7/232 (3%) Query: 271 AGIQR-LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 A I R +L+K N+ LA+R L +E RR +A+ELHD++GQ+++AI+ A Sbjct: 199 ARISRAFNHTVGTLEKTREENRALAQRSLAIQEEERRYLAQELHDELGQSLSAIKAIAAS 258 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 +++ D+ + I+ + ++ +R L+ RLRP LD+L L+ ++ ++ Sbjct: 259 LRKPERDDRPNADAIGAIQSICDHLFAVLRTLMQRLRPLMLDELGLKASLEDMIENWRGR 318 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW------QQDE 443 I + R+ +FR+ QE L N+V+H+ A+ + + ++ E Sbjct: 319 YPSIALDFSCDDGIDECIGDARIHVFRIVQESLTNVVRHSGAAKLGIHLDLIEATGERPE 378 Query: 444 RLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 L+L + DDG+G P G GL G+RERV +L G +S G V++ + Sbjct: 379 ALLLEVSDDGAGFDPARVPAGLGLLGIRERVESLRGQFSLSTRPGAGVTLRI 430 >UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus RepID=LIAS_BACSU Length = 360 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 144/342 (42%), Gaps = 31/342 (9%) Query: 179 INWRG-RHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLM 237 + WR R LL + L + L + + LI+ + Sbjct: 9 LQWRAIRMTTGISLLLFVCLISFMMFYYRLDPLVLLSSS----WFGIPFILILLLISVTV 64 Query: 238 NAIALIASQTWRDHPVDLLLSLLVQSLTGLL-----------LGAGIQRLRELNQSLQKE 286 + +D L+ ++ G +G +L E+ + ++ + Sbjct: 65 GFASGYMYGNRLKTRIDTLIESILTFENGNFAYRIPPLGDDEIGLAADQLNEMAKRVELQ 124 Query: 287 LARNQHLAERLLETEE--------SVRRDVARELHDDIGQTITAIRTQ-AGIVQRLAADN 337 +A Q L+ E + R+ +AR+LHD + Q + AI + +++ + + Sbjct: 125 VASLQKLSNERAEWQAQMKKSVISEERQRLARDLHDAVSQQLFAISMMTSAVLEHVKDAD 184 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 + +++E ++ + +R LL LRP L+ L++ + L+ E + + Sbjct: 185 DKTVKRIRMVEHMAGEAQNEMRALLLHLRPVTLEGKGLKEGLTELLDEFRKKQ---PIDI 241 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 EW I ++A+S+ LFR+ QE L+N+ +H+ AS VT+ ++ +L L + D+G G Sbjct: 242 EWDIQDTAISKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKNSQLRLKVIDNGKGFK 301 Query: 458 PGSGQ-QGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 + +GL M+ER + +GG + GT++ V +P Sbjct: 302 MDQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVP 343 >UniRef50_C3BDP5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3BDP5_BACMY Length = 484 Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 130/313 (41%), Gaps = 9/313 (2%) Query: 193 FVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHP 252 ++ + ++L + L +A + + AT ++A L Sbjct: 158 YIFTKIIELVVATFLVCMGAAGIAYYVTRIITRPINSLVDTATGISAGNLSLRAKAESDD 217 Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAREL 312 L+ + L+ + + +L + LQ++ A L +LL E R+ ++REL Sbjct: 218 EVGKLARAFNEMADNLISSS-TAVEKLLKELQEKDALRDTLILKLLSAHEEERKRISREL 276 Query: 313 HDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD 372 HD+ Q +T + I+ D ++ + + + + +R L LRP LDD Sbjct: 277 HDETSQALTFLMVTMRILANEVKDIEQ-QELLNVSRETAASILREIRDLAVELRPPILDD 335 Query: 373 LTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 + L A+R R+ E + V D + + + V L+R+ QE L N+VKH A+ Sbjct: 336 IGLIPALRKHARKFEEKFALTVILHAPDDDIATIDSHTAVALYRIVQESLTNVVKHTVAT 395 Query: 433 AVTLQGWQQDERLMLVIEDDGSG-----LPPGSGQQGFGLTGMRERVTALGGTLHISCL- 486 + + +D + L I D+G G Q G+ GM+ER L G+ I Sbjct: 396 EIVINMEIKDCSIELSIHDNGHGIRETDFEKARQQNRIGIYGMKERAELLDGSFFIKTHN 455 Query: 487 -HGTRVSVSLPQR 498 GT V VS+P + Sbjct: 456 IGGTEVRVSIPLK 468 >UniRef50_Q251B4 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q251B4_DESHY Length = 372 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 12/232 (5%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 A + LRE + ++ + L + ++ +E R+ V+RELHD++GQ I ++ ++ Sbjct: 138 AVVAILREFSPQQEEYVQNL--LTKYIIRAQEDERKRVSRELHDELGQNIYSVLVGLQVL 195 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 ++ + + Q ++Q+ ++ + LRP LDDL L AIRS ++ E + Sbjct: 196 EKAMPEAVQI----QNLQQMVARSLAMLKNIAVELRPSTLDDLGLAAAIRSFLKHFE-QT 250 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI L ++ L+R+CQE + N+ K+A + V + ++L L++E Sbjct: 251 YGIEGQLTVSGEQHRYEPEIETALYRICQEAMLNVAKYAKVTEVQVFLQNYPDQLNLIVE 310 Query: 451 DDGSGLPPGSGQ---QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 D G G G + G GL GM+ER +GG + I GTRV ++P Sbjct: 311 DQGVGFDVGQLEIQGTGLGLYGMKERAQLVGGKVEIVSQVNLGTRVQATIPL 362 >UniRef50_C9LVI4 Histidine kinase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVI4_9FIRM Length = 425 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 29/242 (11%) Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQS 343 +E +++ + ++++ +E R V+RELHD Q I + QA I++R+ D K+ Sbjct: 173 EEAQKSKFIGAQIIKAQEEERLRVSRELHDGPAQDIANLIFQASIIERMVDRDPEEAKRG 232 Query: 344 GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 Q + Q G +R+++ +RP LDDL LE A+R L+ +M G + + + +E Sbjct: 233 LQELRQHIRGCLTDMRQIIFDMRPMSLDDLGLEPALRQLISKMRERGM-LDASIAVEGEE 291 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ 463 L++ V++FR+ QE LNN+ +HA ++ L + ++D+G G P + + Sbjct: 292 QKLAKYAEVSIFRIVQESLNNVSRHAGVKKAEVRILYTASALAITVKDEGRGFDPDAEED 351 Query: 464 G-------------------------FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 +GL GMRER +G L+I GT + + +P Sbjct: 352 AVPSGEEQFDDDRDVNDPILRNAYGQYGLLGMRERAAIIGAELNIISEIGKGTCIHLRMP 411 Query: 497 QR 498 R Sbjct: 412 FR 413 >UniRef50_B6BUB0 Multi-sensor signal transduction histidine kinase n=2 Tax=Betaproteobacteria RepID=B6BUB0_9PROT Length = 541 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 9/234 (3%) Query: 273 IQRLRELNQSLQKE-----LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 I +R++++ L+ E L +N+ L + E E RR +ARELHD++GQ ++AI+ Sbjct: 307 IVSMRDISEKLKAERSKKALDQNRKLTGIIQEKIEDERRSLARELHDELGQYVSAIKIFT 366 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++ A N + S + + + +YD + ++ +LRP LD+L L + I L+ + Sbjct: 367 QNIKNQAKGNDLIATSAESVTSAANQIYDGMHNIIRKLRPGSLDNLGLVETINDLVGVWQ 426 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + + LSE + ++R+ QEG+NN +KHADAS V + L + Sbjct: 427 KQYPAMKVSFKHN-KVENLSEEISINIYRIIQEGMNNCLKHADASEVHIGLIVDKRYLKI 485 Query: 448 VIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISC-LHGTRVSVSLPQR 498 +D+G G + FG+ GMRER+ L G + GT ++ +P + Sbjct: 486 SFKDNGKGFDTKMLKSSKQFGIVGMRERIQGLNGKFELQSNEEGTIITGLIPIK 539 >UniRef50_Q01NL1 Histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NL1_SOLUE Length = 452 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 117/225 (52%), Gaps = 9/225 (4%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNAS 339 ++++ A Q L+ RLLE EE RR ++RELHD+IGQT+ ++ + Q A A+ Sbjct: 220 AAVEQTRAELQQLSARLLEIEEEGRRKLSRELHDEIGQTLALLQIEISRAQVARAGTPAA 279 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 +++ +L+ VR + G LRP LDDL L A++ + + L GIV Sbjct: 280 LREHLDRARELAERTVQTVRNISGLLRPALLDDLGLVPALQFQLEDF-LRRSGIVCEFVE 338 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG 459 + L + + ++RV QE L+N KH+ A V + Q E L+ IEDDG G G Sbjct: 339 QGVADHLPDPVKTCVYRVVQEALHNCEKHSGARKVRVSVRQFPEALVAEIEDDGVGFQMG 398 Query: 460 SGQQ-----GFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 + G GL GMRER +GG+L I HGTRV++ +P Sbjct: 399 GRRASERNMGLGLLGMRERAGNVGGSLVIDSAPRHGTRVALRIPL 443 >UniRef50_C7RKP8 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP8_9PROT Length = 595 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 8/233 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 I + ++ Q L +N L +L++T+E R +ARELHD++ Q +TAIR A + Sbjct: 362 QDITERKLAERATQVLLDQNTRLVRQLMDTQERERVALARELHDELAQHLTAIRAFAAAI 421 Query: 331 QR-LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 QR A + + + + I+ + +Y+ RL+ L P LD + +A+ SL+ + Sbjct: 422 QRDKATPHERILAAARAIDVSARDIYEVSHRLMEGLHPSILDAGCISEAVGSLLAGWGQQ 481 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ----QDERL 445 I +R+ ++R+ QE L+NIV+HA A V + RL Sbjct: 482 HPEIEWRASLAAGLMC-DGPRRLAIYRIVQECLSNIVRHARAERVRIVLATRRGPDGGRL 540 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 LVI DDG G+ G+ Q GFGL GMRERV +LGG+L IS GTRV V LP Sbjct: 541 RLVIRDDGIGMDVGAAQTGFGLLGMRERVLSLGGSLQISSGRGAGTRVRVLLP 593 >UniRef50_Q747N5 Sensory box histidine kinase n=2 Tax=Geobacter RepID=Q747N5_GEOSL Length = 518 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 10/249 (4%) Query: 260 LVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQT 319 L + G+ A + R++ + E R++ L++RLL +ES R+ ++RELHDD+GQ Sbjct: 245 LAVRIPGMSAPAKLGVRRDITARKEAE-QRSRMLSQRLLHAQESERKRLSRELHDDLGQL 303 Query: 320 ITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQA 378 + A++ + + L + V+ + + +RRL L P L+ L L + Sbjct: 304 LNALKIGFDTLAEDLRQPSHDVQDRLWYLSESLNNSIHTIRRLCAGLHPSTLERLGLAET 363 Query: 379 IRSLMREMELEGRGIVSHLEWRIDE-SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ 437 IR + + L+ L + + L+R+ QE L+N+VKHADA+ V ++ Sbjct: 364 IRQQCTQ-AATTHSLDIELKCGTMLGVRLESDTEINLYRIFQEALHNVVKHADATRVMVR 422 Query: 438 GWQQDERLMLVIEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISCLH--GTRV 491 + L IED+G G GL M ERV LGGT I+ L GT V Sbjct: 423 LVASHPTVRLQIEDNGGGFSMEDYAELSGHHLGLISMAERVELLGGTFQIASLPGLGTAV 482 Query: 492 SVSLPQRYV 500 +V +P R Sbjct: 483 TVEVPFRKA 491 >UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 Tax=Burkholderiaceae RepID=Q2SUK5_BURTA Length = 740 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 8/233 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L I ++L + + +A E R +ARELHD++ QT+ +R Sbjct: 496 LRREIVERERAEEALARSREELREIAAISSTAREQERGRIARELHDELAQTLAMLRLD-- 553 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++R++ + + L G A RR+ LRP LDDL L AI+ L++ + Sbjct: 554 -LERVSTTGNELAGRFTEMRGLLDGAVAATRRIASDLRPLMLDDLGLVPAIQWLVQAFQ- 611 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + GI L E L E Q T FR+ QE L N+ +HA AS V ++ D +ML Sbjct: 612 QRHGIGCTLIVDPPELDLVEPQASTTFRILQESLTNVGRHARASHVDIRLIADDREVMLS 671 Query: 449 IEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + D+G G + ++ FGL G+RER + GTL + GT + V +P Sbjct: 672 VRDNGVGFDTENPRKPNSFGLVGLRERAYLVQGTLSVQTAPGRGTAIEVHIPL 724 >UniRef50_B7CDS9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDS9_9FIRM Length = 436 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 81/432 (18%), Positives = 177/432 (40%), Gaps = 28/432 (6%) Query: 83 FPLLMIGSLLTLLPVALIS--RYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNA 140 + + + + + V + Y + + L ++P + Sbjct: 11 WLVYVCMWVFSFFTVWYTAIVMYYTLVHVTKSGYASDFIKNISTLSNVPMRSFYISIF-- 68 Query: 141 LLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSL-VSQPINWRGRHLVWYLLLFVISLWL 199 + + L +++ P F+H+ ++ LG SL + + I++ +LF++ Sbjct: 69 MFIALFCFVSIRPKLKFFYHHQMIPIFIELGFSLILMKNISFSAT-----CILFIVIADC 123 Query: 200 QLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSL 259 + + R L + +YG+ I +++ ++ R + + + + Sbjct: 124 LMYVDKPFDRSICIILVFLAYMFS-NYGYLSNYIP-MISFQEYLSVYNSRTQGLLMGIEV 181 Query: 260 LVQSLTGLLLGAGI----QRLRELNQSLQKELARNQHLAERL---LETEES-----VRRD 307 + +L +L A I Q+ Q A + L +L E R Sbjct: 182 TLTNLNIVLFIAYIFLYLQKQMNETQKFASLNAELKRLNIQLKGYANLREKMGETKERNR 241 Query: 308 VARELHDDIGQTITAIRTQAGIVQRLAADNASV-KQSGQLIEQLSLGVYDAVRRLLGRLR 366 +ARE+HD +G T+T + Q + + +V K ++++ + VRR + +L+ Sbjct: 242 LAREIHDTLGHTLTGLSVGLEACQVMIDRDVNVTKAQLGILQESAKRGLTDVRRSVDKLK 301 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P L+ +L++A+ ++ + + + +L + L+ ++ ++RV QEG+ N V Sbjct: 302 PDALERYSLKEALDMMIMDFQKLTDVTILYL-CHLPLVNLNADEEEIVYRVVQEGMTNSV 360 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL 486 +H A+ + + Q D L+++IED+G G GFG+ + ER+ L G + Sbjct: 361 RHGHATKIYVSIAQADNNLIIIIEDNGQGC--KDVNPGFGIHHLTERINLLQGRIRYYGD 418 Query: 487 HGTRVSVSLPQR 498 +G + V +P R Sbjct: 419 NGFELIVEIPMR 430 >UniRef50_B9XGC5 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XGC5_9BACT Length = 394 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 11/265 (4%) Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ-----RLRELNQSLQKELARNQHLAERL 297 +A +T ++ D +L L + L + A + + + L++ + + L+ L Sbjct: 92 VAIETLKNGATDYVLKLRLARLAPAVTRALRESKERSERKRAVEQLRQSHEQLRALSIYL 151 Query: 298 LETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYD 356 E E R ++R +HD++GQ +T ++ + RL + V + + Sbjct: 152 QEIREEERIRISRAVHDELGQALTGLKIDLSWLAHRLPKEMTPVLNKARDMSAHIDETIQ 211 Query: 357 AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFR 416 VRR+ LRP LD L L AI E++ GI + +D + L E+ FR Sbjct: 212 TVRRISTELRPGILDHLGLVAAIEWQANELQSR-TGIHCKISSSLDHTVLDEDLNTVFFR 270 Query: 417 VCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--QGFGLTGMRERV 474 + QE L N+V+HA A+ V + +++ RL+L ++D+G G+ + GL GMRER Sbjct: 271 IFQETLTNVVRHAHATRVDVNLREENNRLILEVKDNGRGITKEQISNFKSIGLLGMRERA 330 Query: 475 TALGGTLHIS--CLHGTRVSVSLPQ 497 + LGG + I+ GTRV VS+P Sbjct: 331 SLLGGEVVITGVPKKGTRVIVSIPL 355 >UniRef50_Q01N85 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01N85_SOLUE Length = 462 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 5/212 (2%) Query: 288 ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLI 347 + Q L+ LL +E+ RR +ARELHD+IGQ+++AI + + A A + I Sbjct: 237 SDLQELSTLLLRAQENERRALARELHDEIGQSLSAILMETEGAE-CAERRADLSSHLDSI 295 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 + L+ + VR L LRP LDDL L A+ RE G+ + L Sbjct: 296 KGLAEKTVNQVRDLALLLRPSMLDDLGLAPALNWHARETSKR-TGLNVVVSADDAIDDLP 354 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGL 467 + R ++R+ QE +NN V+HA+A V + ++ ++ + + D+G+G +G GL Sbjct: 355 DEHRTCIYRLVQEAVNNAVRHANARTVDVSVRKEGHKVNVTVRDNGAGFDT-RFLRGLGL 413 Query: 468 TGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 GM ERV LGG L I+ GT V +LP Sbjct: 414 LGMEERVRRLGGRLKITSEPGRGTLVHAALPL 445 >UniRef50_A5F1R9 Sensor histidine kinase n=52 Tax=Vibrionales RepID=A5F1R9_VIBC3 Length = 451 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 15/261 (5%) Query: 239 AIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLL 298 A+ T+ V L++++ V + L + RL + N + L + + Sbjct: 194 AVNANIDTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKN---------LKDLVHKTV 244 Query: 299 ETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAV 358 +E ++ +ARELHD I Q + + + ++ D + + L + V Sbjct: 245 LFQEDEKKHLARELHDGINQLLVSSKCHLELLANQLNDPKQIVHLEKSQHSLI-TAINEV 303 Query: 359 RRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVC 418 RR+ LRP LDDL L+ A+ +L+ + +L + + + + L TL+RV Sbjct: 304 RRISHHLRPSALDDLGLQAALTTLLEDFKLHSQ-MEIEMLFDTQPGKLKSEVATTLYRVV 362 Query: 419 QEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG--QQGFGLTGMRERVTA 476 QE LNNI KHA A VT+ Q + L L++ DDG G ++G GL MRERV Sbjct: 363 QESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDDGVGFSSKEALQKRGIGLRNMRERVEF 422 Query: 477 LGGTLHISCLH--GTRVSVSL 495 +GG +S GT ++V L Sbjct: 423 IGGEFELSSEPQLGTEITVLL 443 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 83/369 (22%), Positives = 159/369 (43%), Gaps = 28/369 (7%) Query: 141 LLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVIS---- 196 L+ + + P + + ++ L L + P+ R + WY +I+ Sbjct: 22 WLIVIISANFMFPTSI----HTSSMIVLSLTFVVYLVPLIIRYKKPEWYPAFDIITAGCF 77 Query: 197 -LWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDL 255 L+L P+ L F + + + + +Y W G A L+ + P +L Sbjct: 78 YLYLASVAPNLLWSFILVVIIIGLCSNRNNYIWSGIFCGF---AFPLLNAWIANRPPYEL 134 Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE----SVRRDVARE 311 ++S + G+ IQ ++ +++L L + + EE R ++ E Sbjct: 135 IVSCSLGFAIGISFNILIQYHKQSRIIEEQKLL----LEQHINRIEELTLIEERNRLSHE 190 Query: 312 LHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLD 371 LHD IG T+T++ ++ D S + + ++ + +R+ L L L Sbjct: 191 LHDTIGHTLTSLIAGVTSLRSSVPD--SQFERIDSLISIAQHSLNDIRKHLHELSHNPLS 248 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 + +L + ++ L E ++ G +E+ + + L+R QE L N V+H A Sbjct: 249 N-SLSEFLQQLTDEF-MKSTGTTVTFRMIGNETLVMQKVNFCLYRCLQESLTNAVRHGKA 306 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGT 489 S +++Q D++L L IED+G G+ Q GFGL+GM+ER+ + GTL + GT Sbjct: 307 SNISVQLHFDDQQLRLQIEDNGIGM--KEIQFGFGLSGMKERLEQVQGTLSVQSNVEQGT 364 Query: 490 RVSVSLPQR 498 + ++P + Sbjct: 365 LIICNIPLQ 373 >UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q2B2D2_9BACI Length = 345 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 143/329 (43%), Gaps = 17/329 (5%) Query: 185 HLVWYLLLFVISLWLQLGLPDELS-----RFTPFCLALPII-ALAWHYGWQGALIATLMN 238 + L F + + + L DE F F L I+ A ++G +G+ + Sbjct: 18 MALISSLTFFVGIQIYLFFADEPVLTISISFWLFIYCLLILLAAGGYFGIKGSYLIKGRL 77 Query: 239 AIALIASQTWRDHPVDLLLSLLVQSLTGLL---LGAGIQRLRELNQSLQKELARNQHLAE 295 L+A R + +S GL+ L ++E S+Q+ LA+ Sbjct: 78 GDILVAVSNLRSGKLAGRISSYENDEIGLIAEELDGLADYIQEQVHSVQRLAEERSSLAQ 137 Query: 296 RL-LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLG 353 R+ +AR+LHD + Q + A+ + ++ D+ K+ + I ++ Sbjct: 138 SAHAAAVMEERQRLARDLHDVVSQQLFALSMMSSAALKVFDRDSEKAKKQLKEISGIAAK 197 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 +R LL LRP QL D TL I L+ E+ + + IDE LS+ Sbjct: 198 AQGEMRALLLHLRPIQLSDDTLCDGIIKLIHELRGKTT---IDFQASIDEIELSKAAEEH 254 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMRE 472 LFRV QE L+NI++HADAS + L ++++ L I DDG G P + +GL MRE Sbjct: 255 LFRVVQEALSNILRHADASKIKLTLTEKEDYTYLFIGDDGKGFDPHIERVASYGLKTMRE 314 Query: 473 RVTALGGTLHISCLH--GTRVSVSLPQRY 499 R +GG +I GT + + +P + Sbjct: 315 RCEEIGGIFNIRSKQGEGTYIEIRIPLKG 343 >UniRef50_A5EGA4 Bacteriophytochrome n=13 Tax=Rhizobiales RepID=A5EGA4_BRASB Length = 783 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 16/244 (6%) Query: 269 LGAGIQRLRELNQSLQKELARNQ-------HLAERLLETEESVRRDVARELHDDIGQTIT 321 L + + L ++L+KE + R + +E+ R+ +ARELHD +GQ++T Sbjct: 541 LNERLAQSERLARALRKETELRAAVEGDLTQVLRRTVADQETERQRIARELHDTLGQSLT 600 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 ++ + A ++Q I+ ++ + V R+ +RP +DDL L++AI S Sbjct: 601 MLQLGLQAIGHEIAGGPKLQQRFDGIKTIADSLGRDVHRIATEIRPSAIDDLGLQKAIES 660 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 L+ E + +L + L + TL+RV QE L N+V+HA+A V + Sbjct: 661 LLETWS-ENAALNYYLHLSPKDMRLPKAIEATLYRVLQETLTNVVRHAEARKVGVILNVT 719 Query: 442 DERLMLVIEDDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLHISCLH--GTRVSV 493 D + +++EDDG G P + GL G+RER+ +GG+L I GT V Sbjct: 720 DREVSMIVEDDGRGFPADADDPTASPAMRLGLLGIRERLALVGGSLEIESSPGRGTTVFA 779 Query: 494 SLPQ 497 +P Sbjct: 780 RVPL 783 >UniRef50_Q7WZY5 Oxygen sensor histidine kinase nreB n=64 Tax=Staphylococcus RepID=NREB_STACT Length = 347 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 6/220 (2%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV 340 Q ++E + + ++ + +E+ R+ ++RELHD I Q + + + ++ + D + Sbjct: 127 QIQRQERMYQRKMMQKTISAQENERKRISRELHDGIVQELINVDVELRLL-KYQQDKDEL 185 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 + + IE + + D VR L LRP LDDL L+ A RS ++ E + GI + Sbjct: 186 IDNSKRIEGIMSRLIDDVRNLSVELRPSSLDDLGLDAAFRSYFKQFE-KNYGIHVNYHTN 244 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 ++RV QE L N +K+A V + + ++ + D G G G Sbjct: 245 FSAQRFDNEIETVVYRVVQEALFNALKYAQVDIVEVSLQLNENNIIAEVSDRGVGFKRGD 304 Query: 461 GQQ--GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 + G GL GM ER + GT++I GT V++ +P Sbjct: 305 DPKGTGLGLFGMNERAELVNGTVNIDSQINRGTIVTLEVP 344 >UniRef50_Q2BPE6 Sensor histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPE6_9GAMM Length = 451 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 7/263 (2%) Query: 233 IATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQH 292 I+ + AI L ++ R+ +++ L + L+G I + Q R + Sbjct: 189 ISNEVAAIRLKVTRNIRNTFFTVVVILAGTVIIIALVGVAIN-----MHASQLADERLRQ 243 Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLS 351 LA ++ + S RR+ ARELHD I Q + +++ + + + +L + S + Sbjct: 244 LAHNHVQFQVSQRRNFARELHDGINQLMVSVKFRLELARDKLLKQDDSAVNDLDKGCDVL 303 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 VRR+ LRP QLDDL LE AI S+ + R +++++ + E L ++ Sbjct: 304 NMAIQEVRRISHDLRPIQLDDLGLESAIYSMTSDFSERTR-MLTNVRIELPEQRLPDDIE 362 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMR 471 +TL+R+ QE L NI KHA+A+ V ++ W ++ + + + DDG G + G GL MR Sbjct: 363 ITLYRIVQESLTNIEKHAEANNVGIRIWPKEGYIWVEVADDGKGFVEDKAEAGIGLLNMR 422 Query: 472 ERVTALGGTLHISCLHGTRVSVS 494 ER L G + G+ + Sbjct: 423 ERTELLSGHFSLKSRPGSGTKLR 445 >UniRef50_Q5WK46 Two-component sensor histidine kinase of nitrate reduction n=3 Tax=Bacillales RepID=Q5WK46_BACSK Length = 359 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 7/223 (3%) Query: 280 NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS 339 Q +E+ + H+ + +++ +E R+ ++RELHD + Q + + +V+ + Sbjct: 128 KQQKTQEMLQRNHMLKYVIKAQEDERKRISRELHDSVAQELLSSLVDLRVVKYMDVGEDV 187 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 +K+ Q EQ + D +R L LRP LDDL LE A RS + ME + G++ Sbjct: 188 LKK-LQHTEQSLTRLLDDIRHLAVELRPSSLDDLGLEAAFRSHFKWME-KNYGLLVKFSA 245 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP- 458 + + ++RVCQE + N +K+A+ V ++ ++ +L LV+ D+G G Sbjct: 246 ELAAARYGSEIETVVYRVCQEAVLNALKYAETDEVYVRLCEEHGQLQLVVRDEGVGFDMV 305 Query: 459 --GSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 + G GL GMRER +GG I GT V +S+P Sbjct: 306 INEAKGTGLGLYGMRERTELVGGQFTIHSAVGEGTTVQLSIPL 348 >UniRef50_Q0A524 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A524_ALHEH Length = 486 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 83/227 (36%), Positives = 114/227 (50%), Gaps = 3/227 (1%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 + + SL R Q L RL + +E+ R +ARELHD++GQ + AIR A I+ Sbjct: 214 RHFNSMADSLATSHQRIQRLNRRLFDVQEAERHTLARELHDELGQCLVAIRADAMIIANA 273 Query: 334 A-ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 A A+V+ S I Q + VY RR++GRL P L+ L L A+R + + Sbjct: 274 PDAPPANVRASADAIRQTAGHVYQLTRRIMGRLHPAALEQLGLGPALRQMAGDWARRHPD 333 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 I +E + L +Q + L+RV QEGL N+ KHA A V L+ + E L LVI DD Sbjct: 334 IAVAMEIQDTPRGLPPSQAIHLYRVVQEGLTNVTKHAHARRVRLRLRDRGEHLWLVIGDD 393 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLH--ISCLHGTRVSVSLPQ 497 G GL G GL GM ER+ LGG L GT + ++P Sbjct: 394 GHGLGTRRDGDGMGLMGMAERIQGLGGRLRCFSGPAGGTTLVAAVPL 440 >UniRef50_C0QFU9 Two-component protein, sensory box histidine kinase/response regulatory protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU9_DESAH Length = 798 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 148/345 (42%), Gaps = 38/345 (11%) Query: 167 WLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDE-LSRFTPFCLALPIIALAWH 225 P +++Q GR + S ++ L PD+ ++ FT +P+I+ Sbjct: 478 ISEFNPGILNQ-----GRRVTVNCKNLSASSFVALTFPDDRINHFT----CIPLIS---- 524 Query: 226 YGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQK 285 G LI +L S+ R +P + + + + L + L++ + + Sbjct: 525 ---NGKLIGSL------NLSEATRSYPHMVEIDIFEEVAASLAVAIQSVNLQKSEKRYHR 575 Query: 286 ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG- 344 +L R L+ ++ E +E+ R ++ ELHD+IGQ +TA +++L + + G Sbjct: 576 DLER---LSAKVFEMQEATCRKISFELHDEIGQALTAANINLAAIKKLILPDPQQRLPGL 632 Query: 345 -QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 + + + + L L P L D LE I+ +R + E I + Sbjct: 633 VNDTQAIINRLTEQAHDLSLNLWPPMLRDFGLESTIQWYLRRIG-EKVNIQLIFDGSDFP 691 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD-ERLMLVIEDDGSGLP----- 457 ++ TL+R+ QE LNN++KHA A+ V + Q+ + ++ED+G G Sbjct: 692 ERPAQEIETTLYRLVQEALNNVLKHAQATRVDISITQKQNGMIFFMVEDNGQGFDLETTL 751 Query: 458 -PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 + G+ GMRER+ LGG L I GT VS +P + Sbjct: 752 SDETMNDRLGILGMRERIAILGGKLDIWSSLDKGTCVSAEIPWQE 796 >UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FA0 Length = 423 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 93/333 (27%), Positives = 133/333 (39%), Gaps = 20/333 (6%) Query: 182 RGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIA 241 R R + F++ L L L FT F IA A + Sbjct: 87 RTRKPWLAIGFFLVLLAGATVLTSRLDPFTAFASVGYPIAFVLFPTRWSIFAAAATAVVP 146 Query: 242 LIASQTWRDHPVDLLLSLLVQSL--TGLLLGAGIQRLRELNQSLQKELAR-------NQH 292 L+A W+ P + +V + +GA ++ R N+ L + AR N Sbjct: 147 LLAKGLWQPSPPWITAVSIVGPILYVAWFVGAENEQRRRTNEKLAQTNARLETALTENAA 206 Query: 293 LAERLLETEE-----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLI 347 L +LL R+ +ARE+HD + Q +T I TQ R A + A ++ + Sbjct: 207 LHAQLLTQARQAGVLDERQRMAREIHDTVAQGLTGIVTQLQAADR-ATEAADRQRHLAHV 265 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 L+ RR + LRP L D L +A+ L + + G + D L Sbjct: 266 HTLAKDSLTEARRAVQALRPEPLADSHLPEALAGLANRVS-DTSGTKVTADVEGDARPLL 324 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS--GQQGF 465 VTL+RV QE L N KHA A+ + + + +ML I DDG G PG GF Sbjct: 325 PELEVTLYRVAQEALANAEKHARANRIGITLTYTSDLIMLDIRDDGRGFAPGDRGDGTGF 384 Query: 466 GLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 GL MR+RV + G+L I GT V P Sbjct: 385 GLEAMRQRVQRVAGSLTIESARGEGTVVHAECP 417 >UniRef50_A0LNB4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNB4_SYNFM Length = 784 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 24/241 (9%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 I ++L +++ + ++L+ RLL +E R+ VA ELHD IGQ++ AI+ R Sbjct: 537 ITERKKLEMAIKDSERQLKYLSSRLLTAQEEERKRVAAELHDSIGQSLAAIKYGVENAVR 596 Query: 333 --LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 +A +V S L+ + G + RRL LRP LDDL + I L +E Sbjct: 597 YGASAGEETVFHSLGLLIPIIQGAIEEARRLYMGLRPSMLDDLGVIVTIDWLCKEFRRNY 656 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 + ++E + E+ ++ +FRV +E LNNI +H+ A V + + L + Sbjct: 657 PEMRISERIELEEDCIPESLKIVIFRVVEEALNNISRHSRAEGVEVALSISGGAIRLDVA 716 Query: 451 DDGSGLPPGS------GQQGFGLTGMRERVT---------ALGGTLHISCLHGTRVSVSL 495 DDG G S ++GFGL GMRERV ++ G GT VSVS Sbjct: 717 DDGVGFDQDSLHHAVESEKGFGLAGMRERVALSGGSLSVSSIRG-------KGTTVSVSW 769 Query: 496 P 496 P Sbjct: 770 P 770 >UniRef50_C7QHJ0 Histidine kinase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QHJ0_CATAD Length = 432 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 106/393 (26%), Positives = 166/393 (42%), Gaps = 35/393 (8%) Query: 137 SWNALLLTLTGGLTLAPICLVFWHYLANNT-----WLPLGPSLVSQPINWRGRHLVWYLL 191 + L ++LT L + P V++ + + W+ G +L+ P R V+Y + Sbjct: 12 PYAGLAVSLTLALIIGPRTGVYYTVVLGGSAAAALWVRRGRALLDAPNPPVLRATVYYAV 71 Query: 192 LFVISLWLQLGLPDELSRFTPFCLALPIIALAWH------YGWQGALIATLMNAIALIAS 245 L + L L P L F F L + L G GA+ T M I I Sbjct: 72 LLALLATLILTSP--LFGFFGFTGYLHAMVLPGRTKLFGIAGTAGAMATTQMGGIVNIHG 129 Query: 246 QTWRDHPVDLLLSLLVQ---SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLL-ETE 301 + V + ++LL+ ++TG + L E N+ L + L N L +L+ + Sbjct: 130 AGVYLYLVLVAVNLLIAGTLTVTGAAEEEHRRELAEANERLHEMLEENAGLHAQLVAQAR 189 Query: 302 E----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDA 357 E R+ +A E+HD I Q +T I Q +V+R D K L +L+ Sbjct: 190 EAGVLDERQRLAGEIHDTIAQGLTGIVRQLEVVERFDDDVERRKHHLTLARELARESLAE 249 Query: 358 VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 RR + LRP L L +A+ L GI + +E + ALS V LFR Sbjct: 250 ARRSVQALRPGPLAVAQLPEALAELAASWS-RTAGIEARVEVSGEAVALSPEVEVALFRA 308 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ-----------GFG 466 QE L N K++ A V + + ++L + DDG+G P ++ G+G Sbjct: 309 AQEALANAGKYSGAGRVGVTVSYTSDVVVLDVVDDGAGFDPEEVRRRGADSASENGTGYG 368 Query: 467 LTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 L+ MR R+ +GGTL I GT +S ++P Sbjct: 369 LSAMRSRLRQVGGTLTIESEPGDGTAISAAVPL 401 >UniRef50_UPI0000E0F7D9 sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F7D9 Length = 542 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 93/476 (19%), Positives = 189/476 (39%), Gaps = 31/476 (6%) Query: 52 MLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLP---VALISRYRHQRD 108 + P+ +W ++ L + Q V L + ++ L + ++ Sbjct: 68 FILYPKTHWRLIAFPFLLFHFIANQPVINNFLHSLYLSIFTLIIIIFLAHLTHKLLRGKE 127 Query: 109 WRTLLLQGAALTAAALLQ-SLPWLWHGKESWNALLLTLT---GGLTLAPICLVFWHYLAN 164 +L + LL S ++ + ++ ++ + + Sbjct: 128 SFSLPFIHVVVGFGVLLSLSYQLVYIATVMNPPIFAAISNQWAFFSMGQLVGFIISFSIL 187 Query: 165 NTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAW 224 L + + + + L++ I L L EL + L +P++ + Sbjct: 188 MMIL-MSQNQYAYGMKLLTIESYISLIMITILTILTLFYGGELVHYLSIYLVIPVVWFCY 246 Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPV---------DLLLSLLVQSLTGLLLGAGIQR 275 Y W G T++ I H DL+ LL +L L + A + Sbjct: 247 RYRWWGMSSFTIVINFFTIMFAISNSHFFNIDTNISYDDLIWFLLALNLFSLYINAMVFE 306 Query: 276 LRELNQSLQKE----LARN----------QHLAERLLETEESVRRDVARELHDDIGQTIT 321 L E+ + +K ARN + L L+ +E R+ ++R+L +G+ I Sbjct: 307 LDEIKRVNRKNQVLMTARNADLIEVNTQIKELNRHLISAQEKQRQQLSRQLEKLMGENIN 366 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 A++ +++ A+ + I++ + +Y +V L+ LRP L+ L L + S Sbjct: 367 ALQQSITVLEMRASFSQKENNPYYAIKKFTNIIYLSVYELVNWLRPETLERLGLINTLNS 426 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 + + L I E + + +++ + LFRV QE ++N +KH+ A+ T++ Sbjct: 427 KLFKDALALNNIRYEFELIGEHAEIADEIALPLFRVIQESVSNAIKHSKANTFTVKCQFN 486 Query: 442 DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQ 497 D L L IEDDG+G + ++GFGL+ M+ R+ A+ G ++ +G + ++ P Sbjct: 487 DSHLQLWIEDDGNGFDSDNVKRGFGLSSMKSRIEAINGEFSMTSTNGVSIYINTPL 542 >UniRef50_B1XZ31 Histidine kinase n=5 Tax=cellular organisms RepID=B1XZ31_LEPCP Length = 501 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 7/221 (3%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA-GIVQRLAADNASV 340 + A+ Q +A ++++++E+ R ++RELHD GQT+ +I+ + L + + Sbjct: 246 EYRAADAQLQLMAHQVVQSQENERAHLSRELHDGTGQTLVSIKLLMDSAIGHLKRNLQAP 305 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 + + VR L RLRP LD L A+R L E E + + R Sbjct: 306 PPTLDKARERIDEALSEVRTLSHRLRPTVLDTFGLPAALRYLGEEF-AEHAELAFFMRLR 364 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 E L E+ + LFR+ QE L NI +HA AS V L+ + L ++DDG G + Sbjct: 365 GPEQTLPEDIKTVLFRITQEALTNIERHARASRVDLRLIFGPAGVRLTVQDDGVGYDTQA 424 Query: 461 ----GQQGFGLTGMRERVTALGGTLHISCLHG-TRVSVSLP 496 ++G G MRER+ ++GG L + G TRV +P Sbjct: 425 LQLDPRRGIGQRNMRERMASIGGQLTVQSQPGSTRVIAQVP 465 >UniRef50_C6D5A2 Histidine kinase n=5 Tax=Bacillales RepID=C6D5A2_PAESJ Length = 386 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 12/231 (5%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR--L 333 L ++++ L+ R Q + +++ +E R+ ++RE+HD Q++ I + IV+R L Sbjct: 150 LNQVSRILESAKTR-QMIGLKIIVAQEEERKRISREIHDGPAQSLANIVLRTEIVERMLL 208 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 + V+ ++ + +R+++ LRP LDDL L A+R + E + I Sbjct: 209 KKEFQMVQDELLDLKGQVRSGLEEIRKIIFNLRPMALDDLGLVPALRKFAHDFE-DKTKI 267 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 + E E + +FR+ QE N KHA AS VTL+ E + + I D+G Sbjct: 268 RTIFELSGKEVRMPSAMEAGVFRLVQEAFTNAQKHARASFVTLEVAFTTETVTIAIVDNG 327 Query: 454 SGLPPGSGQ------QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 G + FGL GMRERV L G + I GT++ +++P Sbjct: 328 IGFHSEQAEAHAQNNSSFGLIGMRERVDLLEGRMEIDSKLGQGTKIIINIP 378 >UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter sulfurreducens RepID=Q74GJ3_GEOSL Length = 830 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 12/276 (4%) Query: 229 QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA 288 +G ++AT ++ ++ +LL L+ Q L L L ++ A Sbjct: 554 EGTVLATFIDITERRLAEDELHRHRELLEELVHQRTAELKLRNM--ELASEIAERRRAEA 611 Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS--VKQSGQL 346 + RL E EE +R+ +A ELHD+IG+ +TA+ ++ +K + Sbjct: 612 ALRCYTRRLTEMEEDLRKKLAAELHDEIGRDLTALNLNFSVIGNRLVQGPDGCLKARIED 671 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 E+L + VR L +LRP LDD L A+R GI + + Sbjct: 672 TERLIEDISRTVRGLTAKLRPPVLDDYGLPAALRWHADLFS-RRTGIEVTVRGADSVPRM 730 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ--- 463 + + LFR+ QE L N KHA+A V + D R+ L + DDG G P S Sbjct: 731 PAEKEIALFRIVQEALTNCSKHANAGNVKVSLDHGDGRVRLSVVDDGIGFAPESASPTPA 790 Query: 464 --GFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 G+GLT MRER +GGT ++ GT ++V + Sbjct: 791 GSGWGLTIMRERAELIGGTFRLNTAPGKGTVLTVEI 826 >UniRef50_A2SDA5 Signal transduction histidine kinase-like protein n=2 Tax=Burkholderiales Genera incertae sedis RepID=A2SDA5_METPP Length = 394 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 138/286 (48%), Gaps = 13/286 (4%) Query: 215 LALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ 274 L LP I ++ G Q A+ A L A + + + L+ L+ ++ G ++ Sbjct: 91 LLLPFILVSGEIGEQVAVQAMLTGANDYLLKEN-----LARLVPALLHAIEGT---EALR 142 Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 +E + +L + R + LA+ L E+ R +ARE+HDD+G ++TA++ ++R A Sbjct: 143 AKQEADLALGQSEQRLRELAQHLQANIEAERTAIAREIHDDVGGSLTALKFDLAWIERHA 202 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 D A +++ +E ++L ++ +R++ LRP L+ L A++ + + E + Sbjct: 203 RDPAVAQRAQGALETVTL-AIESSQRIMHNLRPAILEQ-GLIAALQWMTQRFEKRNGVVT 260 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 R + L + +R QE L NI KHA A+ V + L L + D+G Sbjct: 261 VFRTSRDELPPLPAGVPLAAYRTAQEALTNISKHAYATRVEVDLTVAGRVLSLEVSDNGR 320 Query: 455 GLPPG--SGQQGFGLTGMRERVTALGGTLHISCLH-GTRVSVSLPQ 497 GL + + FG+ G+RER +GG + +S GT + +S+P Sbjct: 321 GLIQEDLAKARSFGIRGLRERAAQVGGWVDLSSGPGGTTIILSVPL 366 >UniRef50_A1VQL5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQL5_POLNA Length = 468 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 14/280 (5%) Query: 230 GALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAG-----IQRLR------E 278 G + L+ + + P + +L++L + G L I+ R Sbjct: 176 GMTVGILVLNLLIYLPVRRALQPTEQILAVLARMEAGDLFARMPRPSLIELRRIAAGFDH 235 Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-QRLAADN 337 L LQK +A +HLA+RLL E RR +ARELHD+ GQ +T+I +A + R Sbjct: 236 LTGRLQKTMAEQRHLAQRLLAVREEERRCLARELHDEFGQCLTSIGAEAAFITARARERQ 295 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 + + Q I ++ + ++++ +L +LRP LD L + L+ + G L Sbjct: 296 PELLPATQSIASVTAHMMESLQGILCQLRPVGLDAFGLRAGLEQLLGGWQRRLTGCSFEL 355 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + L + V+L+R+ QE L N ++HA VT++ ++ R +L +EDDG Sbjct: 356 FIEGEIDDLPGDLTVSLYRIVQESLTNALRHAAPRKVTVRLRREAARCLLSVEDDGEKRE 415 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSL 495 P + G G+ GM ERV ALGG I G RV Sbjct: 416 PSTAGSGLGVLGMNERVAALGGRFAIEALSPQGMRVHAEF 455 >UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI0_KANKD Length = 247 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 7/233 (3%) Query: 265 TGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 L+ Q+ +++ Q L + + LA+R+ +E R+ +ARELHD +GQ +TA+ Sbjct: 7 ISELVNELSQKQQKIAQELLSGNQQMRTLAKRVWRVQEDERKHIARELHDGVGQLLTALI 66 Query: 325 TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 Q + + + + + L+ R + +RPR LDDL L A++ L R Sbjct: 67 NQLQQMHKEGEPDP---KELEEALTLARQALSDTREISRLMRPRILDDLGLIPALQWLSR 123 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 M E I L ++ + L + + +FRV QE + N +KHADA+ + + + Sbjct: 124 VMG-EKNSIKIDLHEQLSVN-LDDETQTLVFRVVQEAITNAIKHADATHIDITVIATERM 181 Query: 445 LMLVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 L+L I D+G G+ + + +GFGL+ MR+RV A GG L + G + + Sbjct: 182 LVLKIRDNGVGMTKETSESVEGFGLSAMRDRVAAFGGQLMVESQPGDGCEIKV 234 >UniRef50_B9J9Z4 Two-component sensor histidine kinase protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9J9Z4_AGRRK Length = 414 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 74/250 (29%), Positives = 120/250 (48%), Gaps = 17/250 (6%) Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAREL 312 + + ++LV T +LL +R+ + +R + L +R+++T+E R +AREL Sbjct: 164 LIAVPAVLVVFTTCMLLTFRERRMAD---------SRLKELTQRVIDTQEEERARLAREL 214 Query: 313 HDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIE---QLSLGVYDAVRRLLGRLRPRQ 369 HD + Q + +R + R + V + IE +RRL LRPR Sbjct: 215 HDGVSQNLLGVRYVMDLASRKVRN--QVDDAATTIEKGVDALNSAIKDIRRLSHDLRPRV 272 Query: 370 LDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHA 429 LDDL L A+ +L E GI + +E S + L+RV QE LNN+ +H+ Sbjct: 273 LDDLGLTAALTALADNF-AERTGIATEIESVGFSSMVKPEASTALYRVAQEALNNVERHS 331 Query: 430 DASAVTLQGWQQDERLMLVIEDDGSGL-PPGSGQQGFGLTGMRERVTALGGTLHISC-LH 487 A+ + ++ W + R L I D+G+G G G+ G GL M+ER+ G L + Sbjct: 332 GATLLAIKLWSERGRARLRISDNGTGFEAAGEGKGGLGLRNMQERMAHFHGLLLVQSTAD 391 Query: 488 GTRVSVSLPQ 497 GT ++ LP+ Sbjct: 392 GTTLTAMLPK 401 >UniRef50_Q0EZ32 HrpX related protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ32_9PROT Length = 668 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 75/236 (31%), Positives = 121/236 (51%), Gaps = 12/236 (5%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 R ++ + L N+ L +L++ +E RR +AR+LHD++GQ +T I+T+ + Sbjct: 429 TRRKQAEADQARLLQENRALMRQLMQVQEDERRTLARDLHDELGQLLTGIQTRGEYITMH 488 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 A D+ V+ G+ I + + ++A L RLRP LD L L A+ L E + + GI Sbjct: 489 AIDSE-VRIMGEEIVRSTSASFNASHASLLRLRPATLDTLGLTAALTELTGERQKQA-GI 546 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ------QDERLML 447 V L D AL + + + ++R+ QEGL N +H A V + +D +L + Sbjct: 547 VCSLRIDGDIDALDDMRAIAIYRLVQEGLTNAFRHGKADCVNVIIRALPAHAGRDGQLQV 606 Query: 448 VIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQRY 499 I D+G G+ + + G G+ GMRERV ALGGT ++ G R+ LP + Sbjct: 607 EISDNGKGVHAEADRTPTGMGVIGMRERVHALGGTFMLTHVPEDGVRIKAMLPLDH 662 >UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRB4_9ACTO Length = 422 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 20/299 (6%) Query: 214 CLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGI 273 + +AL + + G ++ +L+ + W+ + LL V +GA + Sbjct: 124 FFPMAFVALPGAWAYPGVVLLSLLT-VPEAPRGLWQGLTLGDLLFPTVGVAVASFIGAMM 182 Query: 274 Q-------RLRELNQSLQKELARNQHLAERLLETEES-----VRRDVARELHDDIGQTIT 321 + R RE+N L N L RL+E R +AR++HD + Q + Sbjct: 183 RTVEREAIRRREVNARLVALADENAALQARLVEQARQAGVTAERARLARDMHDTVAQGLA 242 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 I TQ + AD + ++ L+ VRR + LRP LDD L +A+ Sbjct: 243 GIVTQLETAE---ADPDDTARRLRIARDLARDSLVEVRRSVAALRPALLDDADLAEALAR 299 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 + I + L + RV QE L+N +HA AS + + Sbjct: 300 EVDAWR-HRNDIAATFTVTGTPVPLDAAVDEAVLRVAQEALSNTARHAKASRLGVTLSYM 358 Query: 442 DERLMLVIEDDGSGLPPGS-GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 ++ L+L I DDG G + +QGFGLT MR+RV L G++HI GT VSVSLP Sbjct: 359 EDMLVLDIRDDGEGFAVDAEPRQGFGLTAMRQRVEQLDGSVHIESKPGAGTAVSVSLPL 417 >UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT7_THEAQ Length = 564 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 16/252 (6%) Query: 248 WRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRD 307 R + L +++L G L A L ++L ++ A+ L + L+ +E R Sbjct: 321 GRPEVEEAWLRAFLEALAGPLATALEN--ARLYEALAEKEAQRARLLKAWLKAQEEERAR 378 Query: 308 VARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRP 367 +ARELHD++GQ +T + + + +++L+ VRRL LRP Sbjct: 379 IARELHDEVGQALTGLILGLEGL---------PGDRVEALKELARHTLTEVRRLALDLRP 429 Query: 368 RQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVK 427 LD L LE A+R +RE E G+ L + L + ++RV QE L N+ + Sbjct: 430 SVLDHLGLEAALRRYVREF-AERTGVEVDLSLHLT-RPLPQELETVVYRVVQEALTNVAR 487 Query: 428 HADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGF-GLTGMRERVTALGGTLHISCL 486 H+ + ++ + + + +ED+G G P + G GL GMRERV LGG L + Sbjct: 488 HSGSPQASVGVVEVLGEVRVFVEDEGRGFDPEAVDPGRQGLLGMRERVELLGGRLSVESA 547 Query: 487 --HGTRVSVSLP 496 GTRV V LP Sbjct: 548 PGQGTRVQVRLP 559 >UniRef50_C0Q9H3 Sensory box histidine kinase/response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H3_DESAH Length = 557 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 10/237 (4%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + A + L+ R Q L+ LL +E R+ +A LHDD+GQ++T ++ Q Sbjct: 314 ILASAVKQETARTVLKNSEKRLQFLSSHLLTAQEEERKKIAYMLHDDLGQSLTLLKLQIR 373 Query: 329 IVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++ ++ D K L + + VR + L P L DL L A+ SL Sbjct: 374 AIEMKIEKDGKGAKADCCLAMKNISKTIENVREISHSLTPSILKDLGLSAALHSLFEYFG 433 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + HL+ ++ L++ ++ ++R+ QE NIV+HA A + + + + R Sbjct: 434 -RYFNVHRHLDMTDMDNQLTQQSKILVYRIFQEAFTNIVRHAKADQIRVCVDRYNNRYRF 492 Query: 448 VIEDDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 I+D+G G Q G GLT M ERV LGG L I GTR+ +P Sbjct: 493 DIQDNGIGFDLNGLQGNSLKDSGMGLTTMNERVRMLGGQLRIENRMCGGTRLWFEIP 549 >UniRef50_B1KE05 Histidine kinase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KE05_SHEWM Length = 287 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 17/273 (6%) Query: 233 IATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQH 292 + TL N I +QT+ V + ++V +GL L A ++L ++ + + Sbjct: 15 VVTLQNEINGYINQTFVVIFVLTVAGVVVVFFSGLFLQASERKLADV---------KLKA 65 Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSL 352 L R+++T+E R+ V+RELHD I Q + + + + EQ Sbjct: 66 LTNRIVDTQEVERQRVSRELHDGIIQMLVSTKYVVENAIFRLDKGEVATKELTQCEQYLD 125 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 + VRR+ L P L+D L A+ +L+ + I E L + R Sbjct: 126 ATINDVRRISRDLHPNLLEDHGLSAALSALIEDYRNR-LNIDIAFEPLAINKLLPSDART 184 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ------GFG 466 TL+R+ QE L NI +HA A+ VT++ D +L I D+G+G + G G Sbjct: 185 TLYRIAQEALTNIERHAHATKVTVKVKVNDVWFILSISDNGAGFDTQKLSRNKSPFVGIG 244 Query: 467 LTGMRERVTALGGTLHISCL-HGTRVSVSLPQR 498 L M ER++ G L I GT+V LP++ Sbjct: 245 LRNMAERISYFNGRLDIYSASSGTKVVAKLPKK 277 >UniRef50_C6WWI1 Histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWI1_METML Length = 456 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 34/300 (11%) Query: 228 WQGALIATLMNAIA-LIASQTWRDHPVDLLLSLLVQSLTGLL--------------LGAG 272 W G ++N + L+ S + + P+ +L + + G L +G Sbjct: 154 WVGLAFFIILNTLVYLLLSHSLK--PIGRILGAINRIEQGDLTTRLPTFPLPEFDTIGHS 211 Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 + R+ E + ++ L N+ L + + E RR +ARELHD++GQ +TAI+T A + Sbjct: 212 LNRMAESLTA-ERLLEENRQLTHLIQKHIEDERRSLARELHDELGQYVTAIKTFAVSIAN 270 Query: 333 LAADNA------SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A N+ + S Q+I + +YD + ++ +LRP LD+L L + ++ L+ Sbjct: 271 KAKANSSGAGMTEIASSAQVIVSAANQIYDGMHNIVRQLRPGALDNLGLAETLKDLVSSH 330 Query: 387 ELEGRGIVSHLEW-----RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ- 440 +++ + L + +L E + L+R+ QE LNN +K+A+A+ + ++ + Sbjct: 331 QVQHPKLNIQLYLSENLQSGNLQSLGETISINLYRIVQESLNNALKYAEAATIEIRLVKM 390 Query: 441 QDERLMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 D L L I+DDG G+ G+ Q FGL GMRERV AL GT I GT +++ +P Sbjct: 391 SDGELQLSIKDDGVGMDIGAVDQSSHFGLLGMRERVQALHGTFAIESAPKQGTTITIRVP 450 >UniRef50_Q5P5H6 Two-component sensor n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5H6_AZOSE Length = 421 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 7/224 (3%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD 336 + L + + + + E E + +ARE+HD++GQ +TA++ + ++ + Sbjct: 193 NRAKKKLIESERFLRETCKHVEEVREEEKASIAREIHDELGQLLTALKMEVFCIKPGRSH 252 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS- 395 + + + L + VR + LRP+ L+ L L A+ L+++ + GI Sbjct: 253 DVELMSKADAMGVLIDSIIVRVRDIATALRPKVLE-LGLVVAVEWLLQDF-MRRSGIHCQ 310 Query: 396 -HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 HLE ++L +Q + LFR+ QE L N +H+ AS V + + + LVIEDDG Sbjct: 311 LHLEDEGVVNSLGSSQTLALFRILQESLTNAARHSKASNVGVWLARNGKFAELVIEDDGV 370 Query: 455 GLPPGSGQ---QGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 G P +G GL G++ER LGG I G V + + Sbjct: 371 GFDPSGSDDQLRGLGLRGIKERTILLGGRFEIGSRRGAGVKLKV 414 >UniRef50_C0ZDE7 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDE7_BREBN Length = 399 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 4/260 (1%) Query: 240 IALIASQTWRDHPVDLLLSLLVQSLTGLL-LGAGIQRLRELNQSLQKELAR-NQHLAERL 297 L A T+ VD+ +S V G + + L+++ ++E R ++ + ++ Sbjct: 132 YFLSAMPTYEGRYVDMEMSTAVIYENGEQNMQDVLLVLKDMTVKKKEEEVRISKQVLQKT 191 Query: 298 LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDA 357 LE +E+ + +ARELHD +GQ++ ++ +Q + ++ Q I Sbjct: 192 LEAQENEHKRLARELHDGVGQSLYSVSVGIQAIQARLNERGQFREFMQEIVNELEKAIQD 251 Query: 358 VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 V+ +LRP LD L L ++ L+ + + + + N + L+RV Sbjct: 252 VKLYSLQLRPHSLDQLGLIPTVQHLVSSLNKAHQDVSITFSYSNVSDHFQPNLEINLYRV 311 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTAL 477 QE L+N +K+A A+ + + +++D+ L L+I+D+G G Q G GL M ERV + Sbjct: 312 IQESLHNALKYAKATLIEVILYKEDDLLTLLIQDNGIGFVRDQVQVGLGLKHMEERVDQM 371 Query: 478 GGTLHISCL--HGTRVSVSL 495 GTL I + GT + V++ Sbjct: 372 EGTLQIQSVLLEGTSIKVTV 391 >UniRef50_Q3BTZ2 Sensor protein n=13 Tax=Xanthomonadaceae RepID=Q3BTZ2_XANC5 Length = 710 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 111/233 (47%), Gaps = 6/233 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 LL+ + + +L + A Q +A+RL +E RR ++R+LHDDIGQ ITA++ Sbjct: 467 LLVVRDLSEPERMRDALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLS 526 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A +A + +++ L+ +R L LRP QLD L LE A+R M Sbjct: 527 AHAALDEPDADARREDLLEVV-SLADTTVTKLRNLSMLLRPPQLDALGLEAALRWQAS-M 584 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW-QQDERL 445 + L+ + E FR+ QE L N ++HA A V L+ + Sbjct: 585 LFRASQVRLELDIQALEERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDGDSF 644 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 L + DDG G P G +G GL MRER +GGTL I GTRV++ LP Sbjct: 645 RLEVSDDGDGFEPE-GPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLP 696 >UniRef50_C5ATJ2 Sensor histidine kinase n=1 Tax=Methylobacterium extorquens AM1 RepID=C5ATJ2_METEA Length = 481 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 4/228 (1%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 + L L++ A + L +RL + +E RR +ARELHD+ GQ +TA A ++ A Sbjct: 224 VNALGHGLERSTAERKALTQRLFQVQEEERRALARELHDEFGQCLTATGALAAAIEAGAG 283 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 D + + Q I +++ + +R L LRP L++ L++A++ L+ + Sbjct: 284 DRPDLHEDAQAISRITRQMMQTLREALAHLRPPDLEEFGLQRALQRLVATWQRRE-APAF 342 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 L D S + ++++R+ QE L N V+H + V +Q E + +V+ DDG G Sbjct: 343 RLAVDGDFSGVPGPVALSVYRIVQECLTNAVRHGRPTEVDVQLGVSAEEVFVVVRDDGGG 402 Query: 456 LPPG-SGQQGFGLTGMRERVTALGGTLHISCLH-GTRVSVSLPQ-RYV 500 +P G G GL GMRERV ALGG L I G R+ +P R+V Sbjct: 403 VPADTDGVDGHGLLGMRERVEALGGRLRIGSARNGLRIEAVIPIARHV 450 >UniRef50_UPI00016C46BE putative PAS/PAC sensor protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46BE Length = 656 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 22/291 (7%) Query: 229 QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA 288 +G + + N + ASQ + + D+ +S G +R++E L + Sbjct: 356 RGIEVEFVSNVYDVGASQVIQCNIRDVTARKRAESALRTAHGELEERVQERTAELARAND 415 Query: 289 RN--------------QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 + L RL +E RR +ARELHD +GQ +T + +V+ + Sbjct: 416 ALTAEIARRERAEAERRDLQRRLATVQEDERRRIARELHDQLGQHLTGLGLGLKVVKDVT 475 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 + ++ L+ + V +L LRP LDD LE A+ + + E Sbjct: 476 PRPSPAWDRLHELQLLTDRMGGEVHQLALELRPTALDDFGLETALANYIEEWGGRAGVQA 535 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 + L L+RV +E L N++KHA A V++ + ++ ++EDDG+ Sbjct: 536 DFHASGLGAGRLPATTETALYRVIREALANVLKHARAGRVSVVLQGAADAVVAIVEDDGT 595 Query: 455 GLPPG------SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G G+ GMRER+ LGG L I GT V +P Sbjct: 596 GFESEPGPAGAPAGPRLGILGMRERLELLGGNLTIDSRPGRGTTVIARVPL 646 >UniRef50_Q485W7 Sensor histidine kinase n=3 Tax=Alteromonadales RepID=Q485W7_COLP3 Length = 483 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 16/248 (6%) Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 L S+ V L G+ + LR+ Q+ +K L +R++ +E R +ARELHD Sbjct: 221 LSSIFVIFLFGVTVN-----LRQKKQTDEKIT----ELGQRIVNVQEDENRHIARELHDG 271 Query: 316 IGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 I Q + +I+ + L+ V + Q E + D +RR+ + P+ LD+L Sbjct: 272 IIQILVSIKFSLEATKMHLSKAVQEVPKPLQHAEDNLVIAIDEIRRISHHMHPQILDELG 331 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 L AI +L + + G+ + + L + TL+R+ QE L NI KHA A V Sbjct: 332 LSAAIDTLSADFS-DRIGVSIKVFKPRARNLLPDFINTTLYRIVQESLINIEKHAKAEHV 390 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPGSGQQ----GFGLTGMRERVTALGGTLH-ISCLHGT 489 + L L+I DDG G S + G GL + ERV G +S GT Sbjct: 391 EISLSFDKNWLTLIITDDGKGFDINSVSEINDCGIGLRNLAERVEYHLGEFSVVSSSKGT 450 Query: 490 RVSVSLPQ 497 ++ +P+ Sbjct: 451 TITAKIPK 458 >UniRef50_A1K959 Putative sensory box histidine kinase n=1 Tax=Azoarcus sp. BH72 RepID=A1K959_AZOSB Length = 687 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 6/228 (2%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 R L + + AR + LA L E +ARE+HD++G T+T ++ V Sbjct: 448 TERRHLQEEQVETAARFKRLAAHLDMVREEQSTKIAREVHDELGSTLTMLKLGLATVADD 507 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 ++ + + V+R+ LRP LD L L I R+ GI Sbjct: 508 ETTPPRIRNKFAGMLEQIDAALQTVKRISTSLRPATLDTLGLIATISWYARQFS-SMTGI 566 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 L+ + L+ +FR+ QEGL N+ KHA A+ V L +Q +L++ I D+G Sbjct: 567 DVALQMP-EYVRLTPAANTAVFRIIQEGLTNVAKHAGANRVDLTLQKQSGQLVVRISDNG 625 Query: 454 SGL--PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 GL S + FG+ GM ER LGG L +S GTR+++++P Sbjct: 626 VGLTSDSLSKRNSFGVIGMHERAQHLGGRLTLSGAPQTGTRLTLTIPL 673 >UniRef50_C8XB57 Histidine kinase n=2 Tax=Actinomycetales RepID=C8XB57_NAKMY Length = 368 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 25/345 (7%) Query: 162 LANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIA 221 + P+ P+ P + R L + + + + + P +S ++ Sbjct: 3 VTIGRRAPVRPAARRPPTSLYRRLLAFNAAVVLAGALVLIVTPVTVSNPVRLTEVTVLVI 62 Query: 222 LAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLL-------LGAGIQ 274 G + MNAI + A+ D L+ + + L + I Sbjct: 63 --------GGALMVAMNAILVRATLRPLDQLSALMERVDLLRPGDRLAVPADRDMARVIG 114 Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 R E+ L+ E + + L +E R+ +ARELHD+IGQ++TA+ G+ + Sbjct: 115 RFNEMLDRLEHERGVS---SAHALAAQEGERQRIARELHDEIGQSLTAVL--LGLKRTAD 169 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 A +++ +++ D VR + RLRP L+DL L A+ +L + R + Sbjct: 170 QAPAPLREELHDVQETIRACLDEVRTVARRLRPGVLEDLGLRSAMAALASDFTAASR-VP 228 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 + AL + + ++R+ QE L N+ +HADA V L + + L I DDG Sbjct: 229 VDMAVDPRLPALGADAELVIYRIAQEALTNVARHADADRVDLTLIAHPDGVELTIIDDGR 288 Query: 455 GLPPGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQ 497 G P + +G G+ GMRER + TL I G+R+ + LP+ Sbjct: 289 GFDPAT--EGAGIRGMRERAILVAATLTIGPDPGGGSRLRLFLPR 331 >UniRef50_Q2SNP1 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNP1_HAHCH Length = 488 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 6/227 (2%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 ++RE +L+ + N+ L L E R+ +A+E+HD+ T+ AI+ + +++LA Sbjct: 262 QVRERTHALEVAVEENRMLGNTLRTALEDERKLIAQEIHDNFNATLVAIKMYSQKIEQLA 321 Query: 335 ADNASVKQSGQL---IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 + Q + I + Y + R L+ RLRP +D L L A+ L+ Sbjct: 322 REGGEDAQIAGMGGKITSIVTDAYSSARSLVSRLRPEIIDTLGLSGALEELVNNYNQSSN 381 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 G L L E + + ++R+ QE + N VKHA A V + + + LVI+D Sbjct: 382 GCSFMLSIGDHCDNLDEERNIGIYRIVQEAVTNAVKHAAAKEVAISLHR-PKDYELVIQD 440 Query: 452 DGSGLPP-GSGQQGFGLTGMRERVTALGGTLH-ISCLHGTRVSVSLP 496 DG G P G GL MRER +LGG ++ G R+ VS+P Sbjct: 441 DGVGFKPLQEKDAGIGLISMRERAMSLGGRFESVNTEAGARIKVSIP 487 >UniRef50_Q220B2 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B2_RHOFD Length = 359 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 12/264 (4%) Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 I ++ P +L + +L + + + L + Q L+ R+LE +E Sbjct: 94 ILARAKLTEPFGYILKPFSERELRNVLAMALYK-HQAEAKLLTTTRQLQALSRRVLEAQE 152 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLL 362 RR VA ELHD++GQ++TAI+ + +RL D +S + + + I + VRRL Sbjct: 153 FERRRVAIELHDELGQSLTAIKINLQLSERLH-DGSSSELNAENIR-IVEDALQQVRRLA 210 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGL 422 LRP LDDL L A++ + E+ H L+ + FR+ QE L Sbjct: 211 TGLRPAMLDDLGLSPAVQW-IAEVIAARSNFTVHFCPEDMPQRLAPDIETACFRIVQEAL 269 Query: 423 NNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ------GFGLTGMRERVTA 476 NI +HA A VT+ + L+L ++DDG+G + ++ G+ GM+ER Sbjct: 270 TNISRHAQAKRVTITLRRMSNALLLCVQDDGNGFDLHAMRERAMLGGSIGVLGMQERAML 329 Query: 477 LGGTLHISCLHGTR--VSVSLPQR 498 +GG L I G V +S P R Sbjct: 330 IGGQLDIESAPGLGSMVQLSCPWR 353 >UniRef50_B9TCE7 Sensory transduction histidine kinase, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TCE7_RICCO Length = 358 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 6/235 (2%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G+ + RE L++ + LA R E R+ +ARELHD++GQ +TA+R Sbjct: 111 GVAFVVDLTGRREAEHRLRESYEMLRELASRRETDREDERKHIARELHDELGQHLTALRM 170 Query: 326 QAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 +A ++ +L + ++ + + L VR ++ LRP LD + + A+ L Sbjct: 171 RASTLRMQLENHHPALVDETRSLIALVDQTMQVVRSVITSLRPPVLD-MGIAAALEWLAA 229 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E GR + HL R + +SE+ + LFRV QE L N+ +HADA+ V + ++ Sbjct: 230 EFNRNGRTL-CHLLMRDENIEMSEDHAIVLFRVVQEALTNVTRHADATEVIITLDRRPNA 288 Query: 445 LMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 +L + DDG G + + + FGL GM ERV GG + I GT V V LP Sbjct: 289 CLLEVLDDGQGFDVQATRSKSFGLAGMEERVLMHGGKIAIISSPRIGTLVKVDLP 343 >UniRef50_Q7WNB8 Two-component system sensor kinase n=2 Tax=Bordetella RepID=Q7WNB8_BORBR Length = 365 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 16/247 (6%) Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITA 322 ++ G+ + A ++ R+ + LQ+ A L + E+ R+ +A ELHD +G ++A Sbjct: 118 AVIGVGIDATLRLRRQ--EELQQSRAALSELVSHIESVREAERQRIAMELHDAVGGMLSA 175 Query: 323 IRTQAGIVQRL-------AADNASVKQSGQLIEQ---LSLGVYDAVRRLLGRLRPRQLDD 372 ++ + R + Q ++ + L VR++ L P L Sbjct: 176 LKFDMSRLARHIDRTLGGPGQDERRAQLEGVVGECLGLVQDTIATVRQISEDLHPSALPH 235 Query: 373 LTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 L L AI + +R+ E GI E L L+R+ QE + N+ KHA AS Sbjct: 236 LGLAAAIANHLRQFEAR-YGIACRYAGETGELGLDMEAMGHLYRIFQESMTNVAKHAQAS 294 Query: 433 AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCLH--GT 489 V ++ + L+L + D+G GL + G +GL GMRER LGGTL + GT Sbjct: 295 EVQVRLGRDAATLVLSVRDNGVGLSGDDRRPGAYGLLGMRERARRLGGTLSVGAAPEGGT 354 Query: 490 RVSVSLP 496 ++V +P Sbjct: 355 VLTVEIP 361 >UniRef50_Q81FX4 Two-component sensor protein yvqE n=44 Tax=Bacillus cereus group RepID=Q81FX4_BACCR Length = 351 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 11/235 (4%) Query: 267 LLLGAGIQRLRELNQSLQKELAR-NQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 ++L ++ L Q + E A N+ + + + R +ARELHD + Q + A+ Sbjct: 114 IVLARRLEEQAGLFQKVTNERAHWNEEMRQEAIS---QERHRLARELHDSVSQQLFAMSM 170 Query: 326 QAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 + +++ K+ QL+E + + +R LL LRP QL+ L + I L+ Sbjct: 171 MMSAINEQITEFPDVTKKQLQLVENMVVNAQSEMRALLLHLRPVQLEGKKLTEGIEELLT 230 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E+ + +EW I+ L + LFR+ QE L+N ++HA A ++ + D+ Sbjct: 231 ELSRKQH---MKIEWLIEPIELKKGVEDHLFRIVQEALSNTLRHAKAKKTEVRLRKIDQY 287 Query: 445 LMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 +L I DDG G G + G +GL M+ERV +GGTL + GT++ V +P Sbjct: 288 AILKIIDDGVGFEVGVNKAGSYGLRSMQERVHEIGGTLKVLSFPAKGTQIEVKVP 342 >UniRef50_B3E9K4 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K4_GEOLS Length = 395 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 8/235 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + + LQ+ R L+ L + E RR +AR++HDD+GQT+TA Sbjct: 158 LHQHTSEMEAQGRRLQESNRRLSLLSAHLEKVREDERRSIARDIHDDLGQTLTA--MHLE 215 Query: 329 IVQRLAADNA-SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 I L ADN + +++ V+R++ +RP+ L++L LE A+ SL +E+ Sbjct: 216 ITAMLHADNVIDLTPRLCDLKKQVDAAIGTVQRIISTMRPQVLEELGLEAALESLAQEVR 275 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 I + +S+ L+RV QE L N+ +H+ A+ V L ++D L L Sbjct: 276 KR-TNITCVTSCTLAGEPISQEVASCLYRVAQESLTNVFRHSKATKVLLTVRRRDGWLQL 334 Query: 448 VIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 I D+G G+ FG+ GMRERV GG+ IS GT V +P++ Sbjct: 335 QIRDNGVGVSEAQTAASNAFGVMGMRERVARCGGSFSISPRVGGGTIVEAQVPEK 389 >UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS5_HALO1 Length = 509 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 6/235 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L L + ++ + ++ + Q A R+L +E+ R+ ++RELHD IGQ + R + Sbjct: 258 LALIRDVTERKQADDKIRAAVLAKQAFASRILGAQEAERQHLSRELHDSIGQLLLVHRLE 317 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A + + + + + VR L LRP +DDL +E A+ +L ++ Sbjct: 318 AEWLANQLEPGPE-RDATEHLCTGLDETLHLVRTLAMDLRPPAIDDLGIESALETLCVDL 376 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 G+ E + L VTL+R+ QE L N +H+ + + Q D L Sbjct: 377 GRRA-GVRCEFENSVALPGLRTEIGVTLYRIAQEALANAARHSGCRTIRVVLAQHDSTLE 435 Query: 447 LVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 L + DDG G+ P + FGL MRER +GG + I HGT + V++P Sbjct: 436 LSVSDDGVGIAPERLADDASFGLISMRERAELIGGHVSIRSSPKHGTHIRVAIPH 490 >UniRef50_A0QSI7 Sensor histidine kinase n=6 Tax=Mycobacterium RepID=A0QSI7_MYCS2 Length = 413 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 19/272 (6%) Query: 234 ATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHL 293 L+ + + + P D+ L +++ G L+ + + R Q + +E A +++ Sbjct: 140 GGLVGVLNVHTVRRREFTPRDVELLVVI----GRLIAGALHQARLHRQLVARERA-HENF 194 Query: 294 AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLG 353 E+++E +E RR +A ++HD I Q + + + R A D +V + +L+ Sbjct: 195 VEQVIEAQELERRRLAADIHDGISQRLVTLSYRLDAAARAADDPRAVAEQLGKARELADL 254 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 R + LRP LDDL L + SL R + L+ + ++ + ++ + Sbjct: 255 TLQEARAAISGLRPPVLDDLGLSGGLASLARSIP------QVDLDVDLADTRVPDHIELA 308 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ------QGFGL 467 L+R+ QE L N+VKHA A+ L +D L I DDG G G+GL Sbjct: 309 LYRIAQECLQNVVKHARATTARLTFAVEDGIARLEIVDDGIGFDTFEHPLGSDEMSGYGL 368 Query: 468 TGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 M ER +GG L+I GT V+ ++P Sbjct: 369 LSMAERAEIVGGRLNIRSRPGAGTAVTATIPL 400 >UniRef50_C6D204 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D204_PAESJ Length = 367 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 14/233 (6%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L + + RL+++ + LQ+ L+ +++ +E RR +RELHD IGQ++ ++ Q Sbjct: 147 LAIRNEVTRLKKVEEELQETLS-------KVMTIQEEERRKFSRELHDGIGQSLFSLLIQ 199 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 R+ + A ++ I G+ + VR + +LRP LDDL + A+R+ + Sbjct: 200 LD---RVISAPAYGEEQLPFIRNQVAGIIEEVRSVAWQLRPSVLDDLGIVPALRTHLENY 256 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 GI + + L ++R+ QE L NI K+AD S ++ + +++++ Sbjct: 257 -TSHYGIKVSFKSNL-RKRLDVQVETVIYRIIQEALTNIAKYADVSEAEVEILEDEKQVV 314 Query: 447 LVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 I D G G QG G M ER GG L + GT V++ +P+ Sbjct: 315 ARILDRGIGFDMAVQTQGVGRYSMVERAKLAGGNLSMESAIGEGTTVTLIIPK 367 >UniRef50_A1SCE2 Histidine kinase, dimerisation and phosphoacceptor region n=1 Tax=Nocardioides sp. JS614 RepID=A1SCE2_NOCSJ Length = 378 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 94/361 (26%), Positives = 144/361 (39%), Gaps = 13/361 (3%) Query: 145 LTGGLTLAPICLVFWH--YLANNTWLPLGPS-LVSQPINWRGRHLVWYLLLFVISLWLQL 201 + GG L + YL+ W L S L++ P+ WR + L + + L +Q Sbjct: 18 IAGGCLLILTVALLTDDGYLSGPRWAYLTTSCLMTTPLAWRRNAPLTSLTIVMTGLAVQE 77 Query: 202 GLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLV 261 L D + L I A + + A L I+L A W +D + +V Sbjct: 78 LLVDPAPTMDDALIPLLISAFSVA-AYGTRTTAGLGLGISLGAGAIWVG--IDDIFFPVV 134 Query: 262 QSLTGLLLGAGIQRLRELNQSLQK-ELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 L G + L++ + + A + A R +ARELHD + T+ Sbjct: 135 AFSGAWLAGRLVHHLQQQSLMARNYAEALERERAATTRAALAEERTRIARELHDVVSHTL 194 Query: 321 TAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQ--A 378 + QAG + AA + + IE+ + +RRLL LR D +L Sbjct: 195 GVMVVQAGGERLHAAPGSGAHTALASIEESGRLAMEQMRRLLSMLREEA-DTRSLVPQPG 253 Query: 379 IRSLMREME-LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ 437 + L E + G+ L D + + V+ FR+ QE L N V+H+ A+ + Sbjct: 254 LTQLDELTESVRATGLDVSLLVTGDPHPIGPDLDVSAFRIVQEALTNTVRHSGATRAEIH 313 Query: 438 GWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSL 495 L + + D+G G P +G GL GMRERV GG L S L G R+ L Sbjct: 314 LDWASNSLRIEVSDNGRGPSPTPTPEGHGLLGMRERVNLFGGVLSTGRSNLGGYRLMAQL 373 Query: 496 P 496 P Sbjct: 374 P 374 >UniRef50_B0UCY8 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Methylobacterium RepID=B0UCY8_METS4 Length = 700 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 13/226 (5%) Query: 284 QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD---NASV 340 ++ A + L RL + +E +R +ARELHD +GQT+T + ++ L A Sbjct: 464 KRAEAAHHDLLRRLAQAQEDEQRRIARELHDQVGQTVTGLSLGLKGLEDLLARGPSPPRA 523 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 + + ++ L+ + + R LRP LDDL L A+ +L + G+ ++ Sbjct: 524 RDQVRWLQGLAGEIGRDIHRTASDLRPSALDDLGLVNALAALGADWTAR-YGLGVDVQAF 582 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 + L ++RV QE L N++KHA A+ V++ ++ ERL +VIEDDG+G P + Sbjct: 583 GLSARLPLEVETAMYRVAQEALTNVLKHARATHVSVVLERRGERLGVVIEDDGTGFDPEA 642 Query: 461 -------GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + GL+ +RER++ +GGTL + GT + + +P Sbjct: 643 CAPPAEGRPRRLGLSSIRERLSLIGGTLRVESAPGSGTTLFIDVPL 688 >UniRef50_Q11VM9 Two-component sensor histidine kinase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VM9_CYTH3 Length = 585 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 14/225 (6%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 ++++ A + ++ ++ +E R +A E+HD IGQ +T++R + +++ N + Sbjct: 364 KIKRQGAEQKIISYSIINGQEKERTRIAAEIHDGIGQMLTSLRMKMEMIEN---KNTHLG 420 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 + L V + +++ L P LDD L AIR L ++M + L+ + Sbjct: 421 SDITELTDLLQMVINETKKICSDLLPSVLDDFGLSAAIREL-QKMCSATTEMSFDLDDEL 479 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG 461 + AL + +FR+ QEGLNN +KH+ S V + ++ + L ++D+G G Sbjct: 480 EPHALPREVEIGIFRILQEGLNNAIKHSKGSNVFIHISNDEKNVHLFVKDNGKGFDFDEK 539 Query: 462 Q--------QGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 + + GL M+ER LGG + GT + V +P Sbjct: 540 KLLSREFIAKSNGLRNMKERAELLGGKFVVKSLIGEGTTLQVQIP 584 >UniRef50_A1WDW7 Multi-sensor signal transduction histidine kinase n=14 Tax=cellular organisms RepID=A1WDW7_VEREI Length = 468 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 8/232 (3%) Query: 272 GIQRLRELNQSLQKEL-ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 ++R R+ + L +E A LA L + E R +ARELHD++G +TA + + Sbjct: 235 MLERERDRLEGLVRERTATLSELANHLQQVREQERGHLARELHDELGALLTAAKLDVARL 294 Query: 331 Q-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 + +L A + + + Q RR++ LRP L +L L A+ L RE Sbjct: 295 KSKLDAAAPDIAERLAHLTQTLNSGIALKRRIIEDLRPSSLSNLGLTAALEILTREFAGH 354 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 +E ++ L E ++T++R+ QE L NI K+A A V + + + + Sbjct: 355 AG---IEVETSLESVQLPEAVQLTVYRMVQEALTNIGKYAKAQQVLVSVHAHPGHVAVQV 411 Query: 450 EDDGSGLPPGS-GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 DDG G P + GL GMR RV A GG L I+ GT +S LP R Sbjct: 412 RDDGQGFDPAALPPTSHGLAGMRHRVEAAGGRLSITSRPGGGTLLSAILPLR 463 >UniRef50_Q2BNR8 Sensor histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNR8_9GAMM Length = 432 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 3/233 (1%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + + +L++ + N L L+ +E+ R +ARELHDD+GQ +T IR QA Sbjct: 198 INELSSHFNAMAHALEESQSDNARLTHELMRIQENERAHLARELHDDLGQYLTGIRAQAY 257 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++++ A V G I + + R+L+ L P L+ L L +AIR+ + L Sbjct: 258 LIKQSAHVPELVASVGNQIAINCDAMQTSFRQLIRELHPVILEQLGLLEAIRTQVENWGL 317 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 GI +L+ + + + ++R+ QE LNN+ +H+ A +V + +D + + Sbjct: 318 VHTGIKVNLQLPEHIPDMDDERNTHIYRIVQEALNNVAQHSSADSVLIHLQVKDSFIYMN 377 Query: 449 IEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQRY 499 + D+G + G GL M+ER + G L G+ V + +P R Sbjct: 378 VTDNGV-AVERTKTVGLGLRSMQERARCMQGELEFIQEQNKGSLVQLKVPVRE 429 >UniRef50_A7LKW0 Methanol utilization control sensor n=1 Tax=uncultured Methylophaga sp. RepID=A7LKW0_9GAMM Length = 361 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 8/232 (3%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 +L N K L +N+ L + + + E+ R +A ELHD GQ + AI A + + Sbjct: 130 TKLEMQNADNAKLLLQNRALIKHITQVREAERNHLASELHDVFGQYLAAIDVNASVAIKY 189 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 ++ ++ + I+ + + + R L L+P L+ + L AI L+ + ++ Sbjct: 190 KTEDPKLQAILKTIQDSASFLRNVTRSQLRSLKPPGLETVGLSAAIEDLIGQWQMSFPDY 249 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG-----WQQDERLMLV 448 ++ +D+ + + +T++R QE L NI +HA+AS++ + Q + L Sbjct: 250 EINIAIEVDDQLVDYDTALTIYRSLQEALTNITRHAEASSIHIDLITQNKSAQRNDISLT 309 Query: 449 IEDDGSGLPPGSG-QQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 I D+G G P G G GL G+RERV AL G ++ GT +++ +P Sbjct: 310 IRDNGIGFDPNEGMGNGLGLIGIRERVHALNGQFNLHPADPKGTVLALHIPL 361 >UniRef50_B9E9D7 Two-component sensor histidine kinase n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9D7_MACCJ Length = 343 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 116/233 (49%), Gaps = 8/233 (3%) Query: 270 GAGIQRLRELNQSLQ-KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 G + L+ ++Q ++ +E+ + + ++++ +E+ R+ ++RELHD + Q + + Sbjct: 114 GTKVLTLQNISQQIKTQEILHQKTITQKIISAQENERKRISRELHDSVIQELLNVSVDIR 173 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++ ++ Q++E + D +R L LRP LDDL L A S +++E Sbjct: 174 LM--KYKTEEEKEKHLQMMEGSIARLMDDIRNLSLELRPSSLDDLGLVAAFNSHFKQLE- 230 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + G+ +++ I S ++R+ QE + N +K+A+ V + + + L + Sbjct: 231 KSYGLEVNMDEDIGNIRFSNEIETAVYRITQEAILNALKYANVDEVNVFIQKDETELTVE 290 Query: 449 IEDDGSGLPPGSGQQGFGL--TGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 I D G G PG +G GL GM+ER + G + I+ GT V++++P Sbjct: 291 ISDSGDGFTPGDTPKGSGLGFFGMQERAAIVNGHVEINSETGKGTFVTLTIPL 343 >UniRef50_A5FS37 PAS/PAC sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FS37_DEHSB Length = 357 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 115/229 (50%), Gaps = 11/229 (4%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-QRLAA 335 R++ + L+++ + + ++ +E+ R+ ++RELHD++ + + + + ++ Sbjct: 121 RDITEELRRQ-QNMKSFVQDVIRAQEAERKRISRELHDEVAPLLLLLMQKIDNLSKQSER 179 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 D A K + S +++RR+ LRPR LDDL L A+ L ++ +G+ I + Sbjct: 180 DIADCKPQLDALRTQSEEALESLRRIAQDLRPRILDDLGLIPALEWLTEKLAQDGQ-IHT 238 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 + E L+ ++ +FR+ QE NNI KH+ A+ V L+ + + ++L I+D+G G Sbjct: 239 ESNVKGREVELTAEIQLLIFRIAQEAFNNIRKHSLATWVRLELEFKPKAILLTIQDNGKG 298 Query: 456 LPPGS-----GQQG-FGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 Q G GL GM ER +GG +HI GT V +P Sbjct: 299 FNLSEQTDNLAQNGKLGLAGMHERAQLIGGHIHILTHPGQGTTVIAEVP 347 >UniRef50_UPI0001C3138E integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3138E Length = 334 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 13/232 (5%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD 336 R +N+ +++ + A L +E+ R +ARELHD++GQT+TA+ Q R D Sbjct: 97 RAVNEMIERLETERRDSARDALAAQEAERIRIARELHDEVGQTLTAVVLQLERSARELRD 156 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 + + +L+ + VR + RLRP LDDL + A+ SL + G+ Sbjct: 157 APVQRAHVEEARELARTAAEEVREIARRLRPEALDDLGIASALVSLATQ-SARHAGVRVA 215 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG--------WQQDERLMLV 448 E L ++ + ++RV QE L N+ +H+ A A L+ ++L Sbjct: 216 HEIDPQLPPLDDDAELVVYRVAQEALTNVARHSGADAARLRLAPAPPASPGGPPSEVVLT 275 Query: 449 IEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + D G G P + G G+ GMRER G L + GT V +++P Sbjct: 276 VSDRGRGFDPAALAGGGERGIRGMRERAVLAAGRLELESAPGEGTTVRLTVP 327 >UniRef50_B9X9T9 Histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9X9T9_9BACT Length = 382 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 23/251 (9%) Query: 269 LGAGIQRLRELNQSLQKELAR--------------NQHLAERLLETEESVRRDVARELHD 314 L I+ + + L++ +HL+ ++L +E R+ ++RELHD Sbjct: 122 LKREIEERKRAERELRESEEHYRILFNQARLMQENLRHLSSQVLHVQEEERKRISRELHD 181 Query: 315 DIGQTITAIRTQAGIVQR-LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 ++GQ +TA+ +++ + N ++ ++L ++V LRP LDDL Sbjct: 182 EVGQALTAVNVSLALLKNAIDIKNVELRNKITDTQKLLEQTMESVHAFSRELRPAMLDDL 241 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L +RS ++ GI L+ +Q+ L+RV QE L NI KHA AS Sbjct: 242 GLIPTLRSFVKSF-ARRTGIQVSFWATDAVEKLAIDQKTVLYRVGQESLTNIAKHAHASH 300 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGS-----GQQGFGLTGMRERVTALGGTLHISCLH- 487 + + + I+D+G G+ GL G++ERV G + Sbjct: 301 GAVTIRKSKNGFAMEIKDNGKSFQVDQKIALKGKNRLGLLGIQERVKLADGEFKVESTPG 360 Query: 488 -GTRVSVSLPQ 497 GT++ V +P Sbjct: 361 KGTKLLVWIPM 371 >UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR5_RUBXD Length = 407 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 73/328 (22%), Positives = 123/328 (37%), Gaps = 15/328 (4%) Query: 182 RGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIA 241 R R L V L +++ + F +A + + G A L+ Sbjct: 77 RVRLLAVPAFALVSFLIVRMTGLGFSAGFFYAAVANGVFVFGFRRGMAYAGFIMLLLFGD 136 Query: 242 LIASQTWRDHPVDLLLSLLVQSLTGLLLGA------GIQRLRELNQSLQKELARNQHLAE 295 ++ + R L + ++G ++R + L + + L Sbjct: 137 ILWAHPQRGVLWALEQAASWSWPLAFVIGICTLAVESMRRQAHAQELLAELEEAHAELRR 196 Query: 296 RLLETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQL 350 E R +ARE+HD +G +T + Q +L A D ++ + Sbjct: 197 YAERARELAVSEERNRIAREIHDAVGHHLTVVNVQLEAAGKLLARDPGRAAEAVARAKSS 256 Query: 351 SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQ 410 + RR + L+P ++ +A+ L+RE G G+ E + L Sbjct: 257 ASEALSEARRAVRALKPPSMEGRAGLRALDDLVREF--HGSGVAVSFEVSGERRPLPPEV 314 Query: 411 RVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGM 470 L+R QEGL N ++H+ A V ++ E + L + DDG G G+ GFGL G+ Sbjct: 315 EFILYRALQEGLTNALRHSGADRVEVRLDLCGEAVRLSVRDDGRGTSEGASGGGFGLEGL 374 Query: 471 RERVTALGGTLHISCLH--GTRVSVSLP 496 RERV GG + G + V LP Sbjct: 375 RERVAEAGGRISAGDARGGGFALEVELP 402 >UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID=D1VK31_9ACTO Length = 459 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 89/344 (25%), Positives = 143/344 (41%), Gaps = 17/344 (4%) Query: 164 NNTWLPLGPSL-VSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIAL 222 + WL G L ++ + W WY + +L L R F + A Sbjct: 98 RSRWLVFGVHLTLAATLVW---LNPWYGVFAFTGYFLADELGGHARR-VGFVAVALVSAA 153 Query: 223 AWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQS 282 + G+ A + + + A + L + +++ T G I L E N+ Sbjct: 154 SQAAGYPNGSNAHTVTYLIMAAFNVVAVLLMVNLTNRVMEQNTER--GRMIAELAETNRQ 211 Query: 283 LQKELARNQHLAERLL-ETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 LQ + N L +LL + E R +A E+HD + Q + I TQ +R AD Sbjct: 212 LQASMDENAGLHAQLLTQAREAGVAEERGRLAGEIHDTLAQGLAGILTQLEAARRAHADP 271 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 A + +L + L+ RR + LRP QL+ +L A+ L R+ + + + Sbjct: 272 AEWSRHIELADGLARANLTEARRSVRALRPEQLEQASLSDALADLARDWSRRTQ-VPAEA 330 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + +FR+ QE L N+ +HA A+ + D+ L+L + DDG+G Sbjct: 331 VTTGVPVRAPAETEMAVFRIAQEALANVARHAHATRARVTLSYLDDTLLLDVADDGAGFH 390 Query: 458 PGSG--QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 PG+G FG+TGMR R ++ GTL I GT V+ P Sbjct: 391 PGAGAPPARFGVTGMRRRAESVAGTLSIESAPGDGTTVNAVFPL 434 >UniRef50_A4JE38 PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Burkholderiaceae RepID=A4JE38_BURVG Length = 479 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 11/234 (4%) Query: 277 RELNQSLQ-KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV--QRL 333 R++ + + K+L LA R+ E ++ ++RELHDD+GQ +TA++ + Q Sbjct: 244 RDMTERNRLKQLEYASELAARIETAREEEKKRISRELHDDLGQQLTALKMGLNRLVTQDD 303 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 A +A Q + +VRRL LRP LDDL L A+ L+ + + G+ Sbjct: 304 ATPSAQAAQLADSMRAALDRAILSVRRLSAGLRPAILDDLGLLPALEWLVDDFR-QRSGL 362 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHA-DASAVTLQGWQQDERLMLVIEDD 452 + ++ LFR+ QE L NI +HA + + V + + + L IEDD Sbjct: 363 RVLFHTERCDVRFTDAASTALFRIVQEALTNIARHAWNPTEVRIAFRCTESQCDLSIEDD 422 Query: 453 GSGLP----PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRYV 500 G P P + GL G+R+RV LGGT L G +S+S+P+R V Sbjct: 423 GEPAPSTERPPAAVHSSGLAGIRDRVRRLGGTSVAEPLPSRGFGISLSVPRRSV 476 >UniRef50_C8NE28 Sensor histidine kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE28_9LACT Length = 355 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 7/203 (3%) Query: 299 ETEESVRRDVARELHDDIGQTITAIRTQAGIV-QRLAADNASVKQSGQLIEQLSLGVYDA 357 + E RR +ARELHD + Q + A + +R + ++ +IE + Sbjct: 147 QVIEQERRRIARELHDSVSQQLFAAMMMISALNERKQHFDEKEQKQLAMIEHVLSQAQSE 206 Query: 358 VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 +R LL LRP L++ +L+ I L+ E++ + + + W I++ L E LFR+ Sbjct: 207 MRALLLHLRPISLENKSLKSGIEGLLVELQTK---VQMKIHWDIEDVTLPEGVEDHLFRI 263 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTA 476 QE L+N ++H+ A + + Q+D ++ IEDDG G G +G+ M+ERV Sbjct: 264 AQELLSNTLRHSHAKHLEVYLRQKDSNVIFKIEDDGVGFNVDDIHTGSYGINNMKERVQG 323 Query: 477 LGGTLHISC--LHGTRVSVSLPQ 497 LGG + I GT + + +P Sbjct: 324 LGGQVKIVSFPNQGTTIEIKIPL 346 >UniRef50_A6T1A4 Signal transduction histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6T1A4_JANMA Length = 678 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 8/232 (3%) Query: 276 LRELNQSLQKELARN----QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 L+ L+ +A L L T E +R +ARELHDD+G +TA+ ++ Sbjct: 428 LKAHETQLEALVAARTFEVSELIGHLETTREEEKRSIARELHDDLGSALTALNMHLSLLF 487 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 + + I+ L + DA RR+ LRP +LD ++ AI E E + Sbjct: 488 QQMPPEPKFTERSLKIKALLSSITDATRRIQNGLRPDKLDVFGVKVAIAEQAAEFE-KYT 546 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 G+ + D + + LFR+ QE LNNI KHA A+ V + ++ ++L I D Sbjct: 547 GVTCNASLPDDRLIYAPRVDIALFRMVQESLNNIAKHAQATHVDVVLDDTEDEILLTIRD 606 Query: 452 DGSGLPPG-SGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQRYV 500 +G G+P SG GL GMRER LGG++ ++ GT +++S+P+ V Sbjct: 607 NGVGMPTAQSGVMTHGLRGMRERAGYLGGSVQVTSVVGRGTTIAISIPKTAV 658 >UniRef50_C1DSJ2 Intracellular sensory histidine protein kinase, two component n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSJ2_AZOVD Length = 356 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 4/233 (1%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I Q L+ + + LA + E +R +ARE+HD +G +T+I+ Sbjct: 123 VAIDITDRHNYEQELRNSREQLRILARHSNKLAEQLRARIAREIHDVLGGVLTSIKLDTN 182 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +++ A DN + + I LS D VR + +L P LD L L+ A+R+ Sbjct: 183 RLKQRA-DNPETLEIIESILGLSQEGIDMVREISEQLYPAVLDHLGLDAALRNDFERF-C 240 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 G+ L ++ + ++R+ QE L NI KHA A VT+ + + Sbjct: 241 RRTGLNGDFHTSCTALNLGGSKSLAVYRIFQEALTNIAKHAQAEIVTVDVGLDRQLFHME 300 Query: 449 IEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHIS-CLHGTRVSVSLPQRY 499 I+DDG GL ++G GL M+ER +GG L IS GTR+ + +P + Sbjct: 301 IKDDGQGLHANFPREGSLGLLSMKERAAEVGGMLEISGTARGTRLHLQIPLQE 353 >UniRef50_C1DEQ8 Periplasmic sensory histidine protein kinase, two-component n=3 Tax=Proteobacteria RepID=C1DEQ8_AZOVD Length = 458 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 17/257 (6%) Query: 246 QTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVR 305 T L ++L+ GL L RL + + Q L R++ +E R Sbjct: 200 STMVAIATIALAAVLLVFAGGLTLSVREHRLAD---------GKLQSLNRRIVHLQEEER 250 Query: 306 RDVARELHDDIGQTITAIRTQAGIVQRL--AADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 V+RELHD I Q + +I+ Q + A + + GQ E+L G +RR+ Sbjct: 251 SRVSRELHDGISQLLVSIKFQFELAGHQLEAGHSGGLAILGQATERLG-GAIGEIRRISH 309 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP LD L L AI L E E + + + ++ L + V LFR+ QE L Sbjct: 310 DLRPSLLDTLGLPAAIGQLATEFE-QRCALSVVYRNSLHDARLPDEVAVALFRIVQEALT 368 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP---GSGQQGFGLTGMRERVTALGGT 480 NI +HA A +V + + L + DDG G P Q+G GL +RER+ LGG Sbjct: 369 NIERHARAGSVLIDLEPCVSGVQLRVRDDGIGFDPRTIERAQEGIGLRNIRERIEHLGGR 428 Query: 481 LHISCLHG-TRVSVSLP 496 +S G T + V LP Sbjct: 429 FSLSSSTGHTGICVILP 445 >UniRef50_C0A3D8 Signal transduction histidine kinase-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3D8_9BACT Length = 459 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 9/254 (3%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 L ++ + T L R L + ++ + + ++ ++L +E R+ ++RELHD Sbjct: 205 LEEEIVRRQATETALKKSELHTRRLLEQSRQLQEKLRRISHQILTVQEDQRKKISRELHD 264 Query: 315 DIGQTITAIRTQA-GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 +I Q + I + + ++++ + +L V R LRP LDDL Sbjct: 265 EISQLLVGIIVHLVNFTKEAELNPDRIRKTITPLRRLVEKSVLTVHRFARELRPAMLDDL 324 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L A+R+ + +G D L ++R L+RV QE L N+ +H+ A Sbjct: 325 GLIPALRAYIDSFH-RKKGRCIRFMASTDADVLDNDRRTVLYRVAQESLVNMARHSQARV 383 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGSG-----QQGFGLTGMRERVTALGGTLHISCLH- 487 VT++ + R++L I DDG Q GL GMRERV +GG + Sbjct: 384 VTVRLLKIGGRVILEISDDGKAFDVARLTSARWNQRLGLVGMRERVEMVGGRFSVESAPG 443 Query: 488 -GTRVSVSLPQRYV 500 GT V +P + + Sbjct: 444 AGTTVRAEVPVQDI 457 >UniRef50_B2GCM4 Two-component sensor histidine kinase n=8 Tax=Lactobacillus RepID=B2GCM4_LACF3 Length = 355 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 10/257 (3%) Query: 249 RDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQS---LQKELARNQHLAERLLETEESVR 305 +P+ + V S T + ++ L+++ ++A+ + L + + E R Sbjct: 88 HTNPLRYTMVYRVLSPTDQVYALELKSRATLDRATLDRATQVAQQRMLNQYVNRAYEDER 147 Query: 306 RDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRL 365 + ++++LHD I Q + + ++ D +Q +IE V+ + + Sbjct: 148 KRISQDLHDSIAQGVYSAIMGVRRLKSEQLDEPERQQVSTMIETQLDDTLREVKEMALDI 207 Query: 366 RPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNI 425 RP LD L AIR+L + + E G++ + + D S L+ + + L+R+ QE +NN Sbjct: 208 RPSVLDSFGLVAAIRALAKRL-TENSGVIIDVIGKADTSGLTTDVQSVLYRITQEAINNA 266 Query: 426 VKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ----GFGLTGMRERVTALGGTL 481 +KHA+ + +T+ + L + D+G G + + GL M ERV AL G+ Sbjct: 267 LKHANPTEITVMLVAHAHYISLEVIDNGCGFDFQAHRGFNGHSLGLMNMSERVKALNGSF 326 Query: 482 HISCL--HGTRVSVSLP 496 I GT V+V P Sbjct: 327 MIDSAPGQGTTVTVKFP 343 >UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII8_THIDA Length = 493 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 8/232 (3%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IV 330 I R +E + AR + LA + +E R +ARE+HDD+G +T I+ + Sbjct: 256 NITRSKEAEAEIDHSRARLRALAAHVESAKEQERLYLAREVHDDLGGNLTTIKIGLSCLA 315 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 ++ +++ + + + ++ L ++A R+ LRP LD + AI S ++ Sbjct: 316 RQFPSESTPLTERVRYLDNLVDQTFEAAHRIASNLRPAALD-FGIVPAIDSQLQRFG-RN 373 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 I DE L + +FR+ QEGL N+ KHA A+ V L+ + + L L + Sbjct: 374 TEIAYEFRAPTDEIPLDSAAAIAVFRIVQEGLTNVAKHARATRVRLELVRDRDTLHLTLT 433 Query: 451 DDGSGLPPGS---GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 D+G GLP + FG+ GM ER ALGG L + GT +S+ +P Sbjct: 434 DNGRGLPAAPNGMARPVFGILGMSERAAALGGQLVVRPAPDQGTELSLRIPL 485 >UniRef50_D1UD43 Histidine kinase n=2 Tax=Burkholderia RepID=D1UD43_9BURK Length = 340 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 19/243 (7%) Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 + R L Q ++ LA N+ LA L+ EE RR +ARELHD++GQ + AI A ++ Sbjct: 88 LAHRRVLEQEAERLLADNRRLATEALQAEELERRHLARELHDELGQYLNAISLDAARIRD 147 Query: 333 L-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 L A + + + Q + VY + ++ RLRP LD+ L A+ + Sbjct: 148 LSDAREPEIHRISLAVMQSASHVYRQIGGMIRRLRPIGLDEFGLPSALEHCVDGWRERLP 207 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD--------- 442 L D + LS+ +TL+R+ QEGL N+ K A S V + + Sbjct: 208 EASFSLTIEGDYTGLSDTLTMTLYRLVQEGLTNVSKFARRSRVEVFMVRAPREAQSPTKN 267 Query: 443 -------ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSV 493 + +++ + DDG G+ + + G GL GMRERV ALGG H++ G Sbjct: 268 VGKTGPIDEIVVTMADDGPGVDLDAPRAGLGLIGMRERVEALGGEFHVASKPEGGFLFCA 327 Query: 494 SLP 496 LP Sbjct: 328 RLP 330 >UniRef50_B7L2Y8 Histidine kinase n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L2Y8_METC4 Length = 478 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 23/310 (7%) Query: 208 SRFTPFCLALPIIALAWHYGWQGALI-----ATLMNAIALIASQT--WRDHPVDLLLSLL 260 R +A P W+ I + + I L+A+ W P ++ +L Sbjct: 138 RREAGTVVATPDPGAMVRQVWRQVRILVGTASAMAICIGLLATVVIGWTLRPAAVITRVL 197 Query: 261 VQSLTGLLLGAGIQRLR------------ELNQSLQKELARNQHLAERLLETEESVRRDV 308 + G L A + RLR L L++ A + L +RL + +E RR + Sbjct: 198 ARLEQGD-LAARLPRLRSGEFDRIARAVNALGHRLERSTAERKVLTQRLFQVQEEERRTL 256 Query: 309 ARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPR 368 ARELHD+ GQ +TA A ++ A D + + + I +++ + +R L LRP Sbjct: 257 ARELHDEFGQCLTATGALAAAIEAGAPDRPDLHEDARAISRITRQMMQTLREALAHLRPP 316 Query: 369 QLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKH 428 L++ L++A++ L+ + L + S + ++L+RV QE L N V+H Sbjct: 317 DLEEFGLQRALQRLVATWQRRETP-TLRLAVDGNLSGVPGPVALSLYRVVQECLTNAVRH 375 Query: 429 ADASAVTLQGWQQDERLMLVIEDDGSGLPPG-SGQQGFGLTGMRERVTALGGTLHISCLH 487 + V++ + + +++ DDG G+P G +G GL GMRERV ALGG L I Sbjct: 376 GRPTDVSVHLGVSVDAVTVIVRDDGGGVPGDIIGAEGHGLLGMRERVEALGGRLWIGSAG 435 Query: 488 -GTRVSVSLP 496 G + +P Sbjct: 436 SGFGIEAIIP 445 >UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides RepID=D2BHE9_DEHSV Length = 381 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 89/391 (22%), Positives = 151/391 (38%), Gaps = 44/391 (11%) Query: 123 ALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWR 182 + ++ LP L+ W +LL TGG F HY LP + + Sbjct: 10 SQIRRLPRLFANVHIWILILL-FTGG--------FFLHY---PQLLPFIGQIEPDSFLYL 57 Query: 183 GRHLVWYLLLFVISLWLQLGL---PDELSRFTPFCLALPIIALAWHYGWQGALIATLMNA 239 RH V L++ + + L P LS + +P I + + + Sbjct: 58 TRHSVGRLIMLLPVTYTALVFGLRPGLLSLVLAIAIIIPNIFVTDTVTPDDIIEIIGIII 117 Query: 240 IALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE 299 I L+ + + D ++ + LQ+ + +++ Sbjct: 118 IGLVVNLWLESYETDKKHR-----------QQAYLKMETAQRELQRMQQNLRFYLKQITI 166 Query: 300 TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQ----SGQLIEQLSLGVY 355 +E RR +A+ELHDD Q + I + R N ++ + + ++ Sbjct: 167 AQEDERRRIAQELHDDTAQDLIVIS---RAIDRFVTQNPNLGEDNLAELEELQNHVNRTL 223 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 VRR LRP LDDL L A+ L+ ++ + GI ++ + + + LF Sbjct: 224 SEVRRFAQDLRPSVLDDLGLIPALEWLIPDLS-KHFGINIDIDVNGEIRRFAPETELVLF 282 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-------PPGSGQQGFGLT 468 R+ QE L N+ KHA A+ + + L I+D+G G + + GLT Sbjct: 283 RIVQESLRNVGKHAQATKAWVYIDFGKYKATLTIKDNGRGFLLPERVGDLAALGK-LGLT 341 Query: 469 GMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 GM+ER +GG L I GT V+V++P Sbjct: 342 GMQERAQLIGGRLSIQSKPEVGTMVTVAVPN 372 >UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID=C2C0V0_LISGR Length = 358 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 27/343 (7%) Query: 174 LVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALI 233 + S + + + F+ ++ + L + + PF + +PI ++ G +I Sbjct: 9 IYSTALLFAASLIGTIAYYFMSNITIYQLLIGQKVFYVPFVIFVPITVISV-----GVVI 63 Query: 234 ATLMNA-----IALIASQTWRDHPVDLLLSLLVQSLTGLL-LGAGIQRLRELNQSLQKEL 287 L+ + I DL +L ++ + Q++ L + +Q + Sbjct: 64 GALIGYYIKQKLEGIDISLRLLEQGDLEKNLAIEKEESFAEIQQVYQQINRLRKKMQLQN 123 Query: 288 ARNQHLA----ERLLETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN-- 337 AR Q +A E +++E R +ARELHD + Q + A + N Sbjct: 124 ARTQEIASGYAETAGQSKEAILVEERHRIARELHDSVSQQLFAAMMLLSALNEQGEKNAT 183 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 ++++ +L+E + +R LL LRP QL+ +L+ + L++E+ + I + Sbjct: 184 PAMQKQLKLVESIVNDSQSEMRALLLHLRPTQLEGKSLKVGMEQLLQELTAK---IPIEV 240 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 W I + AL + LFR+ QE L+N ++H+ A+ + ++ D+ +L + DDG G Sbjct: 241 RWEIADIALKKGIEDHLFRIVQELLSNTLRHSKAALLEVRLAIVDQVAILKVVDDGVGFN 300 Query: 458 PGSGQQG-FGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 G QG +GL MRERV GGT+ I GT V V +P Sbjct: 301 VGEVAQGSYGLQNMRERVEEFGGTIKIISFPNQGTSVEVKIPL 343 >UniRef50_B8CZJ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ7_HALOH Length = 352 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 14/318 (4%) Query: 185 HLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIA 244 L ++F + + + + + +LP+I+ + L ++L+ + + Sbjct: 41 LLFIIYVIFGYIVGFLISISSQSVIYIAANFSLPVISNVLGRSFITYLASSLVFYLCGLI 100 Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESV 304 P L + + G ++ + + E Q + N+ LA ++ Sbjct: 101 FFPLIGVPFSFNLYISLGVGIGSVMISLFFYVLEQQQEKLELEKENKKLA--II----EE 154 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRL--AADNASVKQSGQLIEQLSLGVYDAVRRLL 362 R +ARELHD + Q + I ++ L D+ V+++ + ++++ V +R ++ Sbjct: 155 RNRIARELHDSVSQNLFGINLNLNTLEVLIDEGDHDRVRKTVEDLKKMVQEVQTEMRLMI 214 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGL 422 L+P L + +A+ SL+ E+ + +E+ + ++ L+RV QE L Sbjct: 215 YELKPVHLREKDFFEALESLV-ELYRNRYNLKITTHLNGNENRVESEVQLALYRVAQEAL 273 Query: 423 NNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG---FGLTGMRERVTALGG 479 NNIVKHADA V++ + + + I+D+G G G + G FG++GM++RV +GG Sbjct: 274 NNIVKHADADKVSITLGIGNNGITMAIKDNGKGFNVGRVKAGSGRFGISGMKDRVNDVGG 333 Query: 480 TLHISCL--HGTRVSVSL 495 I GT V VS+ Sbjct: 334 DFDIESQPGQGTTVKVSI 351 >UniRef50_C7LUF4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF4_DESBD Length = 420 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 7/258 (2%) Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESV 304 Q WR D+ + + +R+RE L+ R + L+ L + E Sbjct: 156 FQGWRLSLRDVTERVQARMFLDQARQNLEERVRERTAELELSRERYRALSGYLQDRIEKE 215 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK-QSGQLIEQLSLGVYDAVRRLLG 363 R ++RE+HD +GQ +TA+ ++R D + + L G VRR+ Sbjct: 216 RAHISREIHDVLGQDMTAMNMGLHRLERSFQDTGDARLAQVVELRALVAGTLQTVRRISR 275 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP LD+L +A+ +R + G+ L +++RV QE L Sbjct: 276 ELRPPMLDELGFAEAVAWQIRTF-AQASGLRVDQHIEG-IPDLPAALATSMYRVLQECLT 333 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGGTL 481 N +H+ + + + L++ + D+G G+ GL GMRERV GGTL Sbjct: 334 NAARHSGGNRLHVAVQAAKGELVMRVADNGRGITKAQADASGSLGLLGMRERVRLAGGTL 393 Query: 482 HIS--CLHGTRVSVSLPQ 497 + GT V V +P Sbjct: 394 TVDRLPKGGTEVVVRVPL 411 >UniRef50_C0N7Q8 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q8_9GAMM Length = 457 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 113/231 (48%), Gaps = 10/231 (4%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR-TQAGIVQR 332 + + L S + LA NQ LA +L+ +E R ++RELHD+ GQ + I I Q Sbjct: 217 EAINALVSSQEATLAENQRLALKLMNAQEEEHRYISRELHDEFGQCLAGINAVTTSIAQT 276 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 + ++ I ++ + A+R LL RLRP +DDL L +++ L+R Sbjct: 277 AKKECPALLDEVNSISHITAHMMTALRNLLTRLRPADVDDLGLSSSLQQLIRSWNKRSGD 336 Query: 393 IV---SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ-QDERLMLV 448 H++ R+D L E V L+R+ QE L NI KHA AS ++ + + + L+ Sbjct: 337 QTQYQIHIDNRVDN--LPEPLPVNLYRIVQECLTNIAKHARASKADIKLTYAKADEITLI 394 Query: 449 IEDDGSG-LPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 I DDG + G GL G+ ERVTALGG + G V++ LP Sbjct: 395 IRDDGIAEADSFTNTMGIGLLGIHERVTALGGQFTLHTEQTGGLVVAIRLP 445 >UniRef50_Q07MS8 Signal transduction histidine kinase, glucose-6-phosphate specific n=4 Tax=Bradyrhizobiaceae RepID=Q07MS8_RHOP5 Length = 464 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 26/292 (8%) Query: 230 GALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLL-----------LGAGIQRLRE 278 GA +A L+ I + P+ L + G L A +L Sbjct: 171 GAAVAVLLLLITMTVVSRALT-PIQSLAEAMASIEAGHYGVRVELGGPPELAAICAKLNH 229 Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA--- 335 L L + + LA R++ +++ R+++ARELHD+ G + A+R AG + R+AA Sbjct: 230 LAGVLGAAIDDKRRLAARVVSLQDAERKEIARELHDEFGPFLFALRAHAGSLTRMAALPS 289 Query: 336 -DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 D A++++ G + + + + RR+L RLRP L +L L +A+++L R + Sbjct: 290 PDIAALQKHGAAMLEQINALQRSNRRVLERLRPAGLSELGLVEALQALARLWRETHPDVA 349 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG--------WQQDERLM 446 + SE +T++RV QE L N+ +HA A+ V + + Sbjct: 350 IVMAVSPSLPVASEIVELTIYRVVQEALTNVFRHAGATRVEVTIEAFERSTAEHHGSAVR 409 Query: 447 LVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL-HGTRVSVSLPQ 497 + +EDDG GL P + G GLTGMRERV ALGGT+ +S G + V +P Sbjct: 410 VRVEDDGIGL-PADHKLGHGLTGMRERVMALGGTMTLSSADRGMTLGVVIPM 460 >UniRef50_C4ZM16 Multi-sensor signal transduction histidine kinase n=1 Tax=Thauera sp. MZ1T RepID=C4ZM16_THASP Length = 484 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 116/250 (46%), Gaps = 12/250 (4%) Query: 258 SLLVQSLTGLLLGA--GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 S V++ T L+G + R ++L+ AR + ++ R+L+ +E+ RR VA ELHD Sbjct: 230 SRGVEAATPRLIGTVHDVTAQRAAAEALRTANARLRQMSLRVLDAQEAERRAVAYELHDQ 289 Query: 316 IGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 IGQ +TA++ + +V + I + VR L LRP QLD + L Sbjct: 290 IGQALTAVKLDLQAMTPHLDAGPAVARLAAAIH-TTEEALAQVRGLSLNLRPPQLDYMGL 348 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 E ++R E G+ + E E + FR+ QE L N+V+HA A V Sbjct: 349 EASLRWHAER-ECARAGLALDFAGSVGEFKAEERCAIVCFRLLQEALTNVVRHAAAKRVR 407 Query: 436 LQGWQQDERLMLVIEDDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLHISCLH-- 487 + D RL L I DDG G ++ GL GM ER +GG +HI Sbjct: 408 IALSAADGRLDLEIADDGRGFDLARARRRMLEGASVGLLGMEERAALIGGEVHIDAAPGA 467 Query: 488 GTRVSVSLPQ 497 GTR+ VSLP Sbjct: 468 GTRIRVSLPC 477 >UniRef50_B2ID99 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2ID99_BEII9 Length = 560 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 27/249 (10%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT-------QA 327 +L +L++ HL +RL+ +ES R+++ARELHD+ G + IR A Sbjct: 296 HFNQLAATLERSEVDKHHLIDRLISVQESERKELARELHDEYGAALFGIRAATSCILDSA 355 Query: 328 GIVQRLAADN----ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 +QR + + Q I QL+ + RR+L R+RP L + L +A+R L+ Sbjct: 356 HALQRPEPGENQNIQEISERAQAISQLADTIQKQNRRILERIRPAVLHRMGLPEALRHLV 415 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG----- 438 + + +G L +D ++ E +T +R+ QE L NI +H+ A + + Sbjct: 416 EDWQTHHKGFSCALTLAVDSASFDEEVSLTFYRLVQECLTNIARHSQARSARITLALVAA 475 Query: 439 --------WQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HG 488 + + L L IEDDG GLPP S + GFG GM ERV L G L I HG Sbjct: 476 SAHPEEGVSEPGQNLCLRIEDDGIGLPP-SFRFGFGFLGMSERVRKLAGCLRIENALPHG 534 Query: 489 TRVSVSLPQ 497 T + +P Sbjct: 535 TLIEALIPL 543 >UniRef50_C0GH42 Multi-sensor signal transduction histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH42_9FIRM Length = 651 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 12/251 (4%) Query: 258 SLLVQSLTGLLLGAGIQRLRELNQSL--QKELARNQHL-AERLLETEESVRRDVARELHD 314 ++++ T LL I + + + + +++L NQ E + +E R ++RELHD Sbjct: 390 EIILKVTTNLLDNGDIPGFQHIAKDITEERKLHENQQFYIEHITRAQEEERLRISRELHD 449 Query: 315 DIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 Q++ + Q + + + + + VR+ LRP LDDL Sbjct: 450 STAQSLIVVLHQLEKYLVSSDHLRLGDSRFLFNVAEQVKAILQEVRQFSRDLRPSILDDL 509 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L ++ + E+ G+ L + L RV+LFR+ QE L N+++HA+A+ Sbjct: 510 GLVPSLEWYIDELN-RTHGLKVDLNIIGQKQMLRPEIRVSLFRIIQEALRNVMRHAEANN 568 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGS----GQQG-FGLTGMRERVTALGGTLHISCLH- 487 ++ + + +V++D+G G + G GL GM ER LGG++ IS Sbjct: 569 AKVKIEFDNNEVRVVVQDNGKGFDAEPLGDLLRNGKLGLAGMHERAKILGGSIEISSAKG 628 Query: 488 -GTRVSVSLPQ 497 GT + +++P Sbjct: 629 AGTTIFIAVPL 639 >UniRef50_C8WS09 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS09_ALIAD Length = 348 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 67/227 (29%), Positives = 99/227 (43%), Gaps = 9/227 (3%) Query: 276 LRELNQSLQ-KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 +R++ + Q KEL L LE +E R+ +++ELHD + Q++ A+ ++R A Sbjct: 123 IRDVTRERQAKELEMRARLNRMTLEVQEQERKRISQELHDGVSQSLYAVDLGMEHLKRQA 182 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 + ++ + VR L L P L DL L AIR L EM G I Sbjct: 183 --PPRLHRALDDLRAQVKRCSQEVRALSHTLYPSLLYDLGLSAAIRMLSDEMSTSGCRIE 240 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 L L + ++R+ QE ++N + H A + + E + I DDG Sbjct: 241 VSLNKEWPGGDLG-GIAIHVYRIVQEAVHNAISHGRARHIQIHMTC-AEMCEVEIRDDGC 298 Query: 455 GLPPGSGQ--QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 G + G+GL MRER +AL G L I GTRV V P Sbjct: 299 GFDADQIKLLPGYGLKNMRERASALHGVLEIESQPGQGTRVRVIFPN 345 >UniRef50_B0TH54 Sensor histidine kinase, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH54_HELMI Length = 382 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 9/242 (3%) Query: 265 TGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 G++L L++L+ + + R Q A R++ ++ R +ARE+HD Q + ++ Sbjct: 138 VGVVLDFMGGNLKDLHVKMDEAQVRQQA-ALRIIMAQDRERFRLAREIHDGPAQGMNSLV 196 Query: 325 TQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 Q + +RL D V++ Q ++ +R++L LRP LDD L +AIR Sbjct: 197 LQVELCERLLQTDPGRVRRELQELKGRLRDSLKELRKILYDLRPHGLDDQGLIEAIRRYT 256 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 + E G+ + L V +FR+ QE L N+ KHA A V + + Sbjct: 257 ADFS-ERTGLAVETRFFGQACRLERAYEVAIFRMIQEALQNVWKHAGAKRVQVAFEIAPQ 315 Query: 444 RLMLVIEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 + +++ DDG G FGL GMRER L G + GT++ +P Sbjct: 316 AVSVIVRDDGVGFDVADIFARPGDRFGLCGMRERAELLDGEWEVLSRPGQGTQIKFRIPL 375 Query: 498 RY 499 + Sbjct: 376 KS 377 >UniRef50_C4XMF3 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF3_DESMR Length = 704 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 12/227 (5%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAADNASV 340 L++ + L+ RL++ +ES R +AR+LHD++ Q +++++ ++ LA +A++ Sbjct: 463 ELKQAAESIRALSGRLMQAQESERASIARDLHDNVAQDLSSLKIAYETLLDGLADVDAAL 522 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 +Q + L +VR L LRP L+ L L+QA+R L +EM VS+ Sbjct: 523 RQRLEAASGLLARTIASVRELAYGLRPPNLEHLGLDQALRRLSQEMGQASGLAVSYAGVG 582 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP-- 458 ++ + + + LFR+ QE L N+ KHA AS V ++ + +L+L I DDG G Sbjct: 583 LEGLDVDADVAINLFRIAQEALANVRKHAGASRVEMRLIESYPKLILRIRDDGRGFDAVR 642 Query: 459 -------GSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 + + GL MRER GG+L + S HGT V +P Sbjct: 643 EHGDCPGEASRPCMGLINMRERAGLFGGSLRVISSPGHGTTVVAEVP 689 >UniRef50_A9BNQ5 Histidine kinase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BNQ5_DELAS Length = 470 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 134/314 (42%), Gaps = 28/314 (8%) Query: 199 LQLGLPDELSRFTPFCLALPIIALAWHYGW-------QGALIATLMNAIALIASQTWRDH 251 Q P L + W G + AL +A A IA+ WR Sbjct: 147 YQWQKPSSLRTEAKLAYVATVPEWGWSLGTGLYLDDVEQALRQIDESAQANIAATRWRIF 206 Query: 252 PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARE 311 + L +++ + GL+ R+ + Q LA+R++ ++E R VAR+ Sbjct: 207 GIAA-LCIVLIGVAGLVFNLSDHRV---------SSNKLQRLAQRVVHSQEEERTRVARD 256 Query: 312 LHDDIGQTITAIR-----TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 LHD + Q + + + QA + + A D A+ ++ + +RR+ LR Sbjct: 257 LHDGVVQVLVSSKFLLETAQAQLRRLAAQDPATAQRMVDQGLEQLNHALVEIRRVSHGLR 316 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P LDDL L A+ + ++M+ E G+ R + L + LFRV QE + N Sbjct: 317 PALLDDLGLAPALALMSQQMQAE-DGLRMQFGCRGETRFLPPSHATALFRVAQEAVTNAQ 375 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ----GFGLTGMRERVTALGGTLH 482 HA A+ + + Q R++L + DDG G Q+ G GL MRER+ LGG L Sbjct: 376 NHAQATRIDVSLHFQRRRVVLQVSDDGQGFDMRRVQRDRQGGIGLRNMRERIEGLGGHLS 435 Query: 483 ISC-LHGTRVSVSL 495 IS GTR+ L Sbjct: 436 ISSGRRGTRLVAVL 449 >UniRef50_Q0G064 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G064_9RHIZ Length = 457 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 8/227 (3%) Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADN 337 L Q L+ L + L +RL +E R ++AR+LHD+ GQ +TA ++ D Sbjct: 222 LAQRLELSLEDRRVLMKRLFAVQEEERLNLARDLHDEFGQCLTAAVALTSSIEGNAGPDR 281 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG-IVSH 396 + + + ++ + + ++ RLRP L++ L ++ +L+ E G Sbjct: 282 PDIARDAATLSRIERRMMETLKGAFSRLRPPDLEEFGLRTSLDALVHEWNASLSGRTRVS 341 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM----LVIEDD 452 L+ V ++R+ QE L N+ +HADAS + ++ L + + DD Sbjct: 342 LQAPDGLDETPHEVAVAIYRIVQECLTNVARHADASEARVVVAFPEDGLQPSIAVSVSDD 401 Query: 453 GSGLPP-GSGQQGFGLTGMRERVTALGGTLHI-SCLHGTRVSVSLPQ 497 G G G +G GL GMRERVTA GG L I GTR+ LP+ Sbjct: 402 GVGCQTMGEEGRGSGLIGMRERVTAFGGRLSIVDTGRGTRIEARLPR 448 >UniRef50_C6J152 Histidine kinase dimerization and phosphoacceptor region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J152_9BACL Length = 360 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 85/346 (24%), Positives = 149/346 (43%), Gaps = 31/346 (8%) Query: 176 SQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIAT 235 +P N R + +LL VI++ + + F P P G + Sbjct: 4 KKPSNMVSRSMRGGILLSVITMAATIYVMYTYGYFQPQ----PSWRTVIQAGMTLLSLLL 59 Query: 236 LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGA----GIQRLRELNQSLQK------ 285 ++ A +D L L+Q G G+ G L L + L++ Sbjct: 60 IIGAAFGFFLGYRPKRQIDGLREALLQWEKGNQTGSVPKLGEDELGRLAEQLERIGKRWE 119 Query: 286 -ELARNQHLAERLLETEE--------SVRRDVARELHDDIGQTITAIRTQAGIVQR-LAA 335 +++ Q L+ + E R+ +ARELHD + Q + AI A V R L Sbjct: 120 EQVSSLQRLSTHNAQLAEQARVSAIVEERQRLARELHDAVSQQLFAISMTATAVGRTLEK 179 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 D ++ +LIE+++ +R LL LRP L+ L Q + L++E++ + + Sbjct: 180 DFDKAQRQVELIEEMASVAQSEMRALLLHLRPVYLEGKELSQGLSDLVKELKTK---VPM 236 Query: 396 HLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 L IDE L + LFR+ QE ++N ++HA A + ++ + E + + + D+G Sbjct: 237 DLTLEIDEDLNLGKGIENHLFRIIQEAMSNTLRHAKADKMEIRIHHRGEAVKVTLRDNGI 296 Query: 455 GLP-PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G Q +GL+ M+ER+ +GG++ GTR+ +S+P Sbjct: 297 GFELDDKKQASYGLSTMQERIHEIGGSIQFITAPGKGTRIEISVPL 342 >UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C5C2U0_BEUC1 Length = 431 Score = 203 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 83/335 (24%), Positives = 132/335 (39%), Gaps = 27/335 (8%) Query: 188 WYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL----MNAIALI 243 + L+ + L + F + A + W + A + + A I Sbjct: 81 YAGLMIAAGGLVWLAPWYGIFAFVGYVHAYEHLVGGWRHVGAAVTSAIMAVVYLGGFAEI 140 Query: 244 ASQTWRDHPVDLLLSLLVQSLTGLL---------LGAGIQRLRELNQSLQKELARNQHL- 293 W + ++ S+L L + + E N L+ L N L Sbjct: 141 DGDWWLWGAIVVVSSVLASLCFEFLDVSDRHAAEQRQALAEVHEANARLEAALEENAGLH 200 Query: 294 AERLLETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ 349 A+ L++ E R+ +ARE+HD + Q + I TQ ++ A + + + Sbjct: 201 AQLLVQAREAGVLDERQRMAREIHDTLAQGLAGILTQLQAAEQAAHEPEAWGRHVTNATD 260 Query: 350 LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSEN 409 L+ RR + + P L D L +AI + R E + + L D + + Sbjct: 261 LARESLAEARRTVHAVEPEALADARLPEAIGDVARRWS-EVNDVRADLTTTGDPRPMHVD 319 Query: 410 QRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ------Q 463 VTL R QE L N+ KHA AS V L ++ + L + DDG G P + + Sbjct: 320 VEVTLLRAAQEALANVAKHARASRVGLTLSYMEDLVTLDVRDDGVGFEPDATRGQGHADG 379 Query: 464 GFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 GFGL GMR+RV L G L + GT +S S+P Sbjct: 380 GFGLAGMRQRVQRLAGRLDVESEPGGGTAISASVP 414 >UniRef50_B1ZPK4 Histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZPK4_OPITP Length = 377 Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 9/216 (4%) Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA-DNASVKQSGQLI 347 + Q L ++L +E RR+++RELH ++ QT+ I Q + + A+ +K L Sbjct: 156 KLQRLTRQILSAQEDERREISRELHGEVVQTLVGINVQLATLGKAASLGIRGLKAKIDLT 215 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 ++L +AV + LRP LDDL L A+ + M+ M R + L AL Sbjct: 216 QRLVARSVNAVHQFARELRPAVLDDLGLIPALHASMKTMAAR-RNLKVRLTASAAVEALD 274 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG-----SGQ 462 R L+RV QE L N+ +HA A V L + + L + DDG G Sbjct: 275 APLRTVLYRVAQEALTNVTRHARARHVDLTIVEVAGGIRLDVHDDGKGFAVQKTLSSRAN 334 Query: 463 QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + GL GMRERV +GGTL I GT V +P Sbjct: 335 RRLGLLGMRERVEMVGGTLTIESSPGRGTTVRAEVP 370 >UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KDL3_BACHD Length = 351 Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 85/339 (25%), Positives = 151/339 (44%), Gaps = 24/339 (7%) Query: 179 INWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFC----LALPIIALAWHYGWQGALIA 234 + W+ + F + + + D+++ T + LPI+ LIA Sbjct: 10 LQWQFIRNSLIVSFFAVLFTVVIMTYDDIAGLTMLFDKQIVRLPILVPILLSMIAIGLIA 69 Query: 235 TLMNAIALIASQTWRDHPVDL----LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARN 290 +M ++ + H V L S ++S L RL + + +++++A Sbjct: 70 GMMQSLPIKRKLDQILHGVLLYERGTFSHQIESEGEDELAELTDRLNRMAERVEEQVASL 129 Query: 291 QHLAERLLETEE--------SVRRDVARELHDDIGQTITAIRTQAGIV-QRLAADNASVK 341 Q L+ + +E R+ +AR+LHD + Q + AI + Q L V+ Sbjct: 130 QRLSSERAKMQETVKKAAVTEERQRLARDLHDAVSQQLFAISMMTAAIKQNLHEATEEVQ 189 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME-LEGRGIVSHLEWR 400 Q ++E+++ +R LL LRP +L+ +L+Q + L+ E+E +G I LE Sbjct: 190 QQMDVVEKMANTAQAEMRALLLHLRPAELEGKSLQQGVEYLLHELEQKQGFKITKRLE-- 247 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 L + LFR+ QE ++NI++HA A V ++ WQ + ++ L + DDG G Sbjct: 248 -PMDELPKGVEDQLFRMLQEAISNILRHAQAHHVEVRFWQTERQVRLKLIDDGVGFDVQK 306 Query: 461 GQQG-FGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 G +GL M ER+ +GG L I GT++ +P Sbjct: 307 ETHGSYGLQTMHERINEIGGVLDIVSAPGKGTQLEAKIP 345 >UniRef50_UPI0001C314AD GAF sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AD Length = 386 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 4/210 (1%) Query: 290 NQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ 349 + + E RR ARELHD+ Q + ++ R +++ + V+ + + + Sbjct: 170 ERQRLRDTMAAAEQERRRWARELHDETLQGLGGLQVLLSSALRRSSEPSQVEGAVRAAVE 229 Query: 350 LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH--LEWRIDESALS 407 + +R L+ LRP LD+L LE A+ SL + +V+ + + L Sbjct: 230 EIGTEIEKLRTLITELRPAALDELGLEPALESLAGRVAAVEGIVVTSEVVLADGERRRLP 289 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGL 467 + ++R+ QE L N VKHA A V ++ ++D + L + DDG+G G+ + GFGL Sbjct: 290 PDLETAVYRLVQEALTNAVKHARAERVDVRVTERDGCVELTVRDDGAGFDVGAPRAGFGL 349 Query: 468 TGMRERVTALGGTLHISCLH--GTRVSVSL 495 GM ERV GGTL + GT + +L Sbjct: 350 LGMEERVALAGGTLAVQSRPGAGTTIRATL 379 >UniRef50_B8FX95 Sensor DegS domain protein n=3 Tax=cellular organisms RepID=B8FX95_DESHD Length = 393 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 8/217 (3%) Query: 288 ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA-DNASVKQSGQL 346 Q +A++++ ++ RR VARE+HD Q + I + I ++L A D V+ Sbjct: 172 EHRQEIAQKIIRAQDEERRRVAREIHDGPAQNLANIVLRLEIAEKLLALDPTRVRAEITD 231 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 ++ L +RR++ LRP LD+ A+ + + E + + E L Sbjct: 232 LKGLVRSNLQDIRRIIFDLRPIALDNHGFISALEKYLMTFQ-ETYHLTCDFKVIGKERRL 290 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP----GSGQ 462 V LFR QEGL NI KHA A + ++ ++ + I D G G + Sbjct: 291 LPAVEVALFRSLQEGLTNIAKHARADWARVLIEYEECQIQIQITDRGIGFNVEEAFANPG 350 Query: 463 QGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 FGL GM+ER+ G + ++ GT V + +P Sbjct: 351 DHFGLVGMKERIEMFNGQIILTSIPKKGTTVKLIVPN 387 >UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKB3_BURGB Length = 687 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 19/271 (7%) Query: 244 ASQTWRDHPVDLLLSLL---VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 + P++ +S L + ++L +R+R N +L+ + + L + Sbjct: 409 LRANGEEFPLEASISQLGDGAGRICTIVLRDVTERVRSDN-ALEHARDELRAWSAHLQQA 467 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRL-------AADNASVKQS---GQLIEQL 350 E + +ARELHDD+GQ + + +A + A D ++ + + +L Sbjct: 468 GEEEKTRLARELHDDLGQQLAVLEMEASAAAQALDRVLDGARDPGLIETAVNKLHGMRRL 527 Query: 351 SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQ 410 + +VRR+ LRP LDDL + AI L + GI + E L+ Sbjct: 528 TDSAVASVRRVAANLRPLMLDDLGVVPAIEWLASDFAKRH-GIEVVRHVALGERTLTGAG 586 Query: 411 RVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG--FGLT 468 LFR+ QE L N+ KHA AS V + + +L + D+G G+P + G FGL Sbjct: 587 ATALFRIVQEALVNVAKHAQASRVDICLKAVGDACVLRVADNGRGVPHERPRAGKAFGLI 646 Query: 469 GMRERVTALGGTLHIS--CLHGTRVSVSLPQ 497 G+RER ALGG L I+ G ++V+LP Sbjct: 647 GVRERAHALGGRLTIAGPPGQGFSITVTLPL 677 >UniRef50_Q01SI4 Sensor protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SI4_SOLUE Length = 449 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 236 LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 L A A I +T + L+ + L + ++ + +L + ++ + A ++ Sbjct: 180 LSVAQAQIEHRTSHLSEISLVFAAASVVLALIFAVFTVRLVSQLIRQMESQTAELGRVSW 239 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 +LE +E+ R + ELHD++GQ++TA++T + + + L Sbjct: 240 HMLEDQEATARRFSHELHDELGQSLTAVKTNLTAL--AGTTEPQAPRLADCVH-LVDEAI 296 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 VR++ LRP LDD LE +R L GI H+E L ++ LF Sbjct: 297 GNVRQMSQLLRPTILDDFGLEAGLRWLADGFSAR-TGIEVHVESTY-SGRLPDDTETHLF 354 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG-SGQQGFGLTGMRERV 474 R+ QE L NI +HA A VT++ ++ + L I DDG G+ +G G+ GMR R Sbjct: 355 RISQEALTNIARHAAARHVTVKLDRKPAEICLSISDDGRGIAAAPQNGRGLGMIGMRARA 414 Query: 475 TALGGTLHISCLHGTR--VSVSLPQRY 499 + GG +++ G + V +P ++ Sbjct: 415 RSAGGDVNVRSRPGEGVLIEVRVPLKH 441 >UniRef50_D2S9S7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9S7_9ACTO Length = 411 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 17/327 (5%) Query: 183 GRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQG---ALIATLMNA 239 R V YL++ V + L L L LA P + A G L+ L +A Sbjct: 87 RRRAVAYLVVLVAAFGLLGWLASGL--LFLLFLAYPHVWFAVQGTLTGITWTLLLGLASA 144 Query: 240 IALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE 299 + + S T P DLLL V L LG I R+ + +A+ + L Sbjct: 145 VGPLLSATSARSPGDLLLETGVGIAFSLALGVWISRVLRESAERASLIAQLEATRSELAA 204 Query: 300 TEES-----VRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLG 353 E R +A+E+HD + Q T+I A L AD + ++ +IE+++ Sbjct: 205 AERERGVLAERERLAQEVHDTLAQGYTSIVVLAQTADALLPADPEAARERLAVIEEVARD 264 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR--IDESALSENQR 411 R ++ RP LD TL +A+R L E G+ ++ L ++ Sbjct: 265 NLAEARAVVAAFRPVALDGSTLVEALRRLAERFARE-TGLEVRVDTGALDAAPGLRRDEE 323 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMR 471 V L R QE L N+ +HA A+AV L+ + ++ + +EDDG G P S GL G+R Sbjct: 324 VVLLRGAQEALTNVRRHAGATAVVLRLSRVGSQVSVHVEDDGVGFDPASASVS-GLEGLR 382 Query: 472 ERVTALGGTLHISCLH--GTRVSVSLP 496 RV +GG + ++ L GTRV+V +P Sbjct: 383 GRVEQVGGEVDVASLPGAGTRVTVRVP 409 >UniRef50_A1ATT5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATT5_PELPD Length = 381 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 13/243 (5%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE----SVRRDVARELHDDIGQTITA 322 +++ +L E ++L++E AR Q + + E R VAR++HD IGQT+ A Sbjct: 141 IVVEERTGQLNETMEALRQETARRQQIETNVTTMRENLENQERARVARDIHDGIGQTLQA 200 Query: 323 IRTQAGI--VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 I+ Q I + + + ++I +L+ +R ++ LRP L+D L+ A+R Sbjct: 201 IKLQLKIRQARCREGEPCGGQALNEIIGELTSAA-TELREIILALRPLFLEDTDLDLAVR 259 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 SL + G+ E + L + ++++FR+CQE L NIVKH+ + ++ + Sbjct: 260 SLCER-SAKRTGLDVRAECQGSFRGLGSSFKLSIFRICQEALTNIVKHSGCRSALIRLER 318 Query: 441 QDERLMLVIEDDGSG---LPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 + + + I DDG G P Q+G GL MRER LGG L + GT ++V + Sbjct: 319 EPHTMRITIRDDGRGGVSCPTIISQEGSGLAIMRERAELLGGALSVISPPGMGTAITVEV 378 Query: 496 PQR 498 P + Sbjct: 379 PLQ 381 >UniRef50_A6G6J8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G6J8_9DELT Length = 452 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 14/253 (5%) Query: 259 LLVQSLTGLLLGAGIQRLRELNQSL---QKELARNQHLAERLLETEESVRRDVARELHDD 315 ++ L L ++R +L+++L + + R + L+ R + +E+ RR ++RELHD Sbjct: 190 AALEHLNATLEAQVVERSSQLSEALDEVRDKEQRLRELSGRAVALQEAERRSLSRELHDS 249 Query: 316 IGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 GQ +TA+R ++ + + L + +RR++ L P LDDL L Sbjct: 250 AGQALTAVRINLQLLAAMVEAGKPAHALAERTAALVDSTLEEIRRVVDALAPAVLDDLGL 309 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRI-DESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 +A+ + E G+ + D + + +R+ QE L N+ +HA+AS V Sbjct: 310 RKAVERHCDDFS-ERTGVSIEVVIEGLDLAGVDTGVETAAYRIVQESLTNVARHANASHV 368 Query: 435 TLQGWQQD-----ERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLH 487 ++ + D +R+++ I DDG G P ++ GL GM ERV LGG++ + Sbjct: 369 DIRLRRVDVGESSDRVVITIRDDGDGFDPEEVRRKRRRGLRGMHERVELLGGSIQVESAP 428 Query: 488 --GTRVSVSLPQR 498 G +++V LP + Sbjct: 429 GEGAKIAVDLPVK 441 >UniRef50_C7I0E3 Histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I0E3_THIIN Length = 397 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 19/294 (6%) Query: 210 FTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLL 269 PF AL + + W+G L + ++T + TG++L Sbjct: 94 LAPFHAALQASVASGFWNWEGRLHTPHGLKWVNVRARTRS-------IDAFAAESTGIML 146 Query: 270 GAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 LRE L + + +A L E+ R +AR+LHDD+GQ +TA++ + Sbjct: 147 NVTQSHLRES--QLLNLSSDLRQIASHLESVREAERARMARDLHDDLGQVLTALQMDVAL 204 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 +++ A + +++L +A RR+ LRP LD L L+ A+R + + + Sbjct: 205 LRKQFG-AAQAPELFGNVDKLIHAAAEAGRRVASELRPSVLD-LGLKAALRWMSEQY-AQ 261 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ-GWQQDERLMLV 448 I E +S + E LFR+ QEGL N+V+HA A ++ + ++ + Sbjct: 262 RYDIRVSTELSY-KSEVGELIATELFRIAQEGLTNVVRHARARQAWVRCVDVEAHQICIS 320 Query: 449 IEDDGSGLPPGSG---QQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQ 497 +EDDG G P + + GL GMRER GG+ + S G RV V +P Sbjct: 321 VEDDGIGYTPQAPPASRPSLGLRGMRERAAVFGGSFQLDQSPRGGVRVQVCMPL 374 >UniRef50_C1A5E7 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E7_GEMAT Length = 558 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 88/374 (23%), Positives = 135/374 (36%), Gaps = 15/374 (4%) Query: 123 ALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWR 182 AL+Q + + LT LV Y + N W L P W Sbjct: 194 ALVQEMVEHASRFLKADGGYAGLTSVGEHGETRLVSTSYWSQNHWRRL-------PRTWA 246 Query: 183 GRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIAL 242 R + +L +L P + +R HY L + Sbjct: 247 RREGIPGRVLEHEFAYLTADYPADSARDQELVD-----HDGVHYAVCVPLRDASHQVVGF 301 Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 + + I+ R L +L + A + L + E Sbjct: 302 LELHRTIERAPFTWNDASFLEALADTTAMAIENSR-LVTALASKNAEVRQLFALHADRIE 360 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQR-LAADNASVKQSGQLIEQLSLGVYDAVRRL 361 R+ +ARELHD+ GQ + ++ ++ R L +D V+ + R+L Sbjct: 361 EERQHIARELHDEAGQALVGVKLALQVLSRVLPSDTPHVRAPLDELRLQVNQATARFRQL 420 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 RLRP LD L A+ L+ + E G G HLE + +FR+ QE Sbjct: 421 ARRLRPPALDQHGLAAALAQLVHDTEQRG-GFAVHLEVDGLDQRRFPLHETAVFRIVQEA 479 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTL 481 L N+ HA A+ V + + +RL++ + DDG G Q G GL G+ ER LGG Sbjct: 480 LTNVTAHAGATEVRVSVGETAQRLLVRVSDDGCGFDITRSQSGLGLRGIAERAHQLGGLC 539 Query: 482 HISCLHGTRVSVSL 495 ++ GT VS+ Sbjct: 540 DVASQPGTGTVVSV 553 >UniRef50_A8H4Y1 Histidine kinase n=2 Tax=Shewanella RepID=A8H4Y1_SHEPA Length = 1093 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 12/235 (5%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 + ++ Q L + LA ++ +E R+ ++RELHD GQT+TA + + Sbjct: 862 IALDDVKSREQQLSTAYQGLRSLATQIQNAKEEERKSISRELHDQFGQTLTATKINLQLY 921 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 ++ N ++ ++ + +R + LRP LDD L ++ + +M Sbjct: 922 KKF---NYQEQERIDSAISITHTMIQQMRAISFNLRPALLDDEGLVAGVKLQLEKMSALI 978 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 D +++ + +FR+ QE +NN ++HADA + + E+L++ I+ Sbjct: 979 AN-PIEFSVSSDFPIVNQGITINVFRIIQESVNNAIRHADAKQICVSLIYHSEQLLIEIK 1037 Query: 451 DDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 DDG G +Q GL GM ERV +L G L + +G+ + V +P Sbjct: 1038 DDGKGFDVEKAKQNTFSGIHLGLLGMEERVHSLSGKLMLHSSVTNGSIIKVVIPN 1092 >UniRef50_A1TL79 Histidine kinase n=4 Tax=Burkholderiales RepID=A1TL79_ACIAC Length = 467 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 77/250 (30%), Positives = 114/250 (45%), Gaps = 19/250 (7%) Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 L +++ L GL L R+ A+ + LA+R++ ++E R VARELHD + Sbjct: 211 LCIVLIGLAGLALNLSDHRVAS---------AKLRRLAQRVVSSQEEERVRVARELHDGV 261 Query: 317 GQTITAIRTQAGIVQRLAADNASVKQSGQL---IEQLSLGVYDAVRRLLGRLRPRQLDDL 373 Q + + + Q A A+ L +E+L+ + +RR+ LRP LDDL Sbjct: 262 VQVLVSSKFLLETAQVQWAARAAHAPRDMLDHGLERLNDALL-EIRRVSHGLRPALLDDL 320 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L A+ + +E+E +G R L + LFR+ QE + N HA AS Sbjct: 321 GLAPALALMAQEVEEQG-AFSVRFVLRGPAGPLPTSHGTALFRIAQEAITNARMHAGASQ 379 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPG----SGQQGFGLTGMRERVTALGGTLHISC-LHG 488 V + R+ L + DDG G GQ G GL MRER+ LGG I+ G Sbjct: 380 VEVALRFTRWRVSLSVRDDGRGFDVQRVQRDGQGGIGLRNMRERIEGLGGRFAIASGRGG 439 Query: 489 TRVSVSLPQR 498 TR+ L +R Sbjct: 440 TRILAVLDRR 449 >UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT2_METFK Length = 479 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 7/231 (3%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IV 330 I + R Q++++ + L+ +L + +E R +A+E+HDD+G +TAIR ++ Sbjct: 241 NITQSRREQQAIRESHEKLARLSAQLAQIKEKERLKIAQEVHDDLGGNLTAIRLGLSSMI 300 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 +RL + + + +E + ++A R+ LRP L+ L + A+ + ++ Sbjct: 301 KRLGPEQEVLLAKARQLEAIVDDTFEAAHRIASDLRPNVLE-LGIVAALEWQATQF-VDK 358 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI + E +S + +TLFR+CQE ++NI K+A AS V + E +M+ + Sbjct: 359 IGIPCEFVCNVAEVDISTDHAITLFRICQEAMSNIAKYAKASHVEVTLEASAEEIMMQVI 418 Query: 451 DDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 DDG G+ P FG++GM ER AL G + GT VSV+LP Sbjct: 419 DDGIGIAPVDRLKANAFGISGMSERAVALAGQCKVQAGRQGGTIVSVTLPL 469 >UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314U9_DESDG Length = 387 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 8/216 (3%) Query: 288 ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS---VKQSG 344 R + L+ ++L +E R+ + RELHD + QT++ I+ + + + ++ Sbjct: 170 RRLRRLSAQVLSAQEEERKRIGRELHDSMAQTLSGIKFMLEGERSRLEQSGTGWPTERIS 229 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 + IE + RR++ LRP LDDL L A+R L +EM + + + E+ Sbjct: 230 KTIEYV-QHAIVETRRIVMDLRPTVLDDLGLIAALRWLQQEMS-QIHSLTITSHLSLPEN 287 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP-GSGQQ 463 ALS+ Q+ LFRV QE LNN+++H+ + + + Q E ++ + D+GSG + + Sbjct: 288 ALSDVQKSVLFRVAQEALNNVIRHSGSDSARISLEQVGEECVMTVTDNGSGFDRLDNTRN 347 Query: 464 GFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G GL MRER+ + G L I GT V +P Sbjct: 348 GIGLDSMRERLELICGRLDIVTEKGIGTVVRAVVPL 383 >UniRef50_A6GNY2 Histidine Kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GNY2_9BURK Length = 424 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 15/253 (5%) Query: 255 LLLSLLVQSLTGLLLGAGIQRL-----RELNQSLQKELARNQHLAERLLETEESVRRDVA 309 L+L L V + L A IQ L L +Q +LA L +E+ R+ +A Sbjct: 175 LILGLFVVQQRQVALRARIQELLKTENSRLEAKVQARTLELSNLATNLTTAQEAERQHIA 234 Query: 310 RELHDDIGQTITAIRTQAGIVQRLAA---DNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 RELHD++G +TA + AG ++R D ++ +LIE + RRL+ L+ Sbjct: 235 RELHDEMGSALTAAKMDAGWLRRSLGTQVDELVQERMLRLIENIGS-TISMTRRLVDDLQ 293 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P L L L +A+RSL ++ E++ + +++ E +LS Q + LFRV QE L N+ Sbjct: 294 PPLLKGLGLVEALRSLGQQFEMD---MSVVMDFPEHELSLSPEQSLALFRVAQESLTNVR 350 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISC 485 K+A AS V L ++ ++L + D+GSG + + G G+ GM+ R L + Sbjct: 351 KYAKASKVELSLKEKQGMVILSVADNGSGFNTENIELHGHGIAGMKHRAQMFNANLLLDS 410 Query: 486 L--HGTRVSVSLP 496 GTR+ V +P Sbjct: 411 QAGRGTRIEVRMP 423 >UniRef50_A9B913 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B913_HERA2 Length = 695 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 13/270 (4%) Query: 234 ATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHL 293 + + ++ P DL + + + + + +L + + + Q L Sbjct: 421 GCCLGIVQILHGVQTAIRPGDLHFAQALIAHAAVAIDQA-----QLLADVHESEDQLQRL 475 Query: 294 AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLG 353 +L+ T+E+ R +ARELHD +GQ +T ++ + + Sbjct: 476 THQLVTTQETERAALARELHDGVGQALTGLKLYLESTP--LQPITVWRDRIHEATGQVID 533 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 + VR+L +RP L+DL L +++ L++ +E + G+V L L + Sbjct: 534 ILSQVRQLSLDIRPAALEDLGLMVSLQWLLQRVEQQ-TGVVIALHPYTPIPPLPHAIELA 592 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG---QQGFGLTGM 470 L+RV QE +NN+V++A+ + + + L+I+D G G +G GL GM Sbjct: 593 LYRVIQEAVNNLVRYANVATAAIYFGVTTTGVSLLIQDHGRGFDVAQVCQMPRGIGLVGM 652 Query: 471 RERVTALGGTLHISCL--HGTRVSVSLPQR 498 RER+ LGGTL I HGT ++V +P R Sbjct: 653 RERIRMLGGTLTIESALGHGTSLTVDVPCR 682 >UniRef50_C5V178 Multi-sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V178_9PROT Length = 1343 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 5/234 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L + I + + L Q L+ L R +A LHD++G T+ AI+ Sbjct: 1107 LCIAMDITQQKLSEIKLADSYRELQQLSLHLENIRADERARIALNLHDEMGATLVAIKMG 1166 Query: 327 A-GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 + +L AD + + +LS+ +R+++ LRP L D+ + AI+ +++ Sbjct: 1167 LVWLASKLPADAQQLSDEITRLIELSVDGMHVMRQVVTELRPNLLADMGISAAIKDYVKK 1226 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 + I L +L E Q +T+F + QE LNN+ KH ++ VT+ + + + Sbjct: 1227 F-CQHMKIECVLSLPDSVLSLDEKQSLTIFHIVQEALNNVAKHGKSTRVTVHITIRRKSI 1285 Query: 446 MLVIEDDGSGLPP-GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 ++V+ D+G G + FGL +RER LGG +S GTRVSV +P Sbjct: 1286 LIVVGDNGIGFNQVEQKGRSFGLLSIRERALMLGGKARVSSAPGKGTRVSVCIP 1339 >UniRef50_UPI00017893B7 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017893B7 Length = 357 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 9/229 (3%) Query: 275 RLRELNQSLQKELARNQHLAERL-LETEESVRRDVARELHDDIGQTITAIRTQAGIVQR- 332 R + SLQ+ N LAE+ + R+ +ARELHD + Q + AI A V R Sbjct: 117 RWEDQVSSLQRLSTNNAQLAEQARVTAIVEERQRLARELHDAVSQQLFAISMTATAVGRT 176 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 L D ++ LIE++S +R LL LRP L+ LEQ +R L+ E+ ++ Sbjct: 177 LDKDFDKAQRQVALIEEMSAVAQSEMRALLLHLRPVYLEGKALEQGLRDLITELRIK--- 233 Query: 393 IVSHLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 + + + +D+ L + LFR+ QE ++N ++H+ A + ++ ++ + +++ D Sbjct: 234 VPMEITFEMDDDIHLLKGIENHLFRIIQEAMSNTLRHSKAEKMDIRIHRRQNTVRVMLRD 293 Query: 452 DGSGLP-PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 DG G Q +GL+ M+ERVT +GG+L GTR+ + +P Sbjct: 294 DGVGFELDDKKQTSYGLSTMQERVTEIGGSLQFITAPGKGTRIEIIVPL 342 >UniRef50_C2FSZ8 Possible sensor kinase of Zn/Pb responsive two-component regulatory system n=2 Tax=Sphingobacterium spiritivorum RepID=C2FSZ8_9SPHI Length = 625 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 92/402 (22%), Positives = 176/402 (43%), Gaps = 37/402 (9%) Query: 119 LTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLA-NNTWLPLGPSLVSQ 177 L L ++LP+L + + L I L+F H N+ W P+ L Sbjct: 236 LGFQWLYRNLPYLQD----YLRSFIAYASSALLVHIMLLFIHQTRDNSRWYPI---LNGY 288 Query: 178 PINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPI------IALAWHYGWQGA 231 L+ L F SLW++ + + + I I + W Sbjct: 289 KWFCALLMLLPAYLFFDSSLWMEKLNFYTANIVALLTVLILIVNTIERIISGYRLAW--Y 346 Query: 232 LIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQR-------------LRE 278 +A+++ + I + + + + S + + TGL++G ++ L++ Sbjct: 347 YLASMLILLLGILNYVFN---ILGITSFYLFNTTGLVIGLTVEIVFLSFALTQRYNFLKK 403 Query: 279 LNQSLQKELARNQ-HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAAD 336 + LQ+E A+ + L + + +E R +AR+LHDD+G T++AI+ + + Sbjct: 404 ETRILQQEKAKLEIALVDDVFAVQEKERIRLARDLHDDLGGTLSAIKLNVTAFKANIVKS 463 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 + Q ++ +++R + L P+ LD+ L + + E+ G I Sbjct: 464 PDEIHAFYQQTIRMIETACESLREISHNLMPKTLDEKGLTHTLSEQLTELNQSGH-ITFE 522 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 I + L +TL+R+ +E +NN+V+H+ A+ +LQ DE ++++ ED+G+G Sbjct: 523 FVHEIGRAILP-ETELTLYRIMKELINNVVRHSAATKASLQIISTDEHIIVMCEDNGTGF 581 Query: 457 PPGSGQQGFGLTGMRERVTALGGTLHISC-LHGTRVSVSLPQ 497 GS G GL+ +R R+ L GTL++ GT +S+ +P Sbjct: 582 DTGSTPAGIGLSNIRLRINHLNGTLNLESNEKGTSISIFIPH 623 >UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 Length = 670 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 6/220 (2%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASV 340 ++ + L+ L E + +ARE+HD++GQ +T ++ + + + AD + + Sbjct: 444 ERRRAHDLLRELSAHLESVREEEKAHIAREVHDELGQMLTVLKLETSMCELAYADLDPGL 503 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 + +++L ++ VR + LRP LD + AI R E + I ++ Sbjct: 504 SERLDSMKRLIAQLFQLVRDVATALRPPILD-AGIASAIEWQARRFEARTQ-IPCLVQVP 561 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 + ALS+ + +FR+ QE L N+++HA A V + QD + + I DDG G S Sbjct: 562 DNLPALSDARATGMFRILQEALTNVMRHARAHTVEISLTLQDGMMCMSIADDGQGFVIES 621 Query: 461 GQQ-GFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 G+ FGL GMRERV LGG L + GT + +P Sbjct: 622 GRAVSFGLVGMRERVLMLGGRLELDSEVGEGTTLRAYIPL 661 >UniRef50_D0BKY9 Sensor histidine kinase VraS n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BKY9_9LACT Length = 351 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 27/355 (7%) Query: 156 LVFWHYLANNTWLPLGPSLVSQPI------NWRGRHLVWYLLLFVISLWLQLGLPDELSR 209 + F +L ++ +G +++ L+ L+ + +++ + Sbjct: 8 ICFVVFLFVSSIFLIGVNVIHSLFGIELFEKLSSNQLIILFLVVTLIVFVITFMAAS--- 64 Query: 210 FTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLL 269 L + + Y A+ + + + W + + L Q Sbjct: 65 ---IVFFLQRLTDSVMYNQLEAIRNQQYSNVKKSVDEIWYRPLLMIRLDTFFQET----- 116 Query: 270 GAGIQRLRE-LNQSLQKELARNQHLAERL-LETEESVRRDVARELHDDIGQTITAIRTQA 327 A I ++E L Q+LQ+ +R +++ E E E R +ARELHD + Q + A Sbjct: 117 -AKIAEMQEQLVQNLQQISSRPEYIGEETKEEIIELERHRIARELHDSVSQQLFAAMMML 175 Query: 328 GIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 + ++ + ++Q L+E++ +R LL LRP L++ TL Q I SL++E+ Sbjct: 176 SAMNEQKEQLSPVIQQQLALVEKVINDSQSEMRALLLHLRPISLENKTLVQGIESLLKEL 235 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 + L W +DE L LFR+ QE ++N ++HA A + + Q+D+ ++ Sbjct: 236 ---TTKVQLSLHWELDEVTLPSTFEDHLFRIVQELVSNTLRHAKAKQLEVFLKQKDDYII 292 Query: 447 LVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQR 498 L + DDG G + G +GL + ERV +GG I GT + + +PQ+ Sbjct: 293 LKLVDDGIGFDTSVSKAGSYGLKNIEERVAGMGGQCKIISIANQGTIIEIKIPQK 347 >UniRef50_Q0B0G7 Histidine kinase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G7_SYNWW Length = 395 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 8/243 (3%) Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITA 322 S TG+ L + + +S++ E R Q L ++E++E+ RR +ARELHD Q + + Sbjct: 150 SSTGVALKILQGNVERIGESIE-EFQRQQQLGMWIIESQEAERRKIARELHDGPAQNLVS 208 Query: 323 IRTQAGIVQRLA-ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 + + ++ +L + + I+ ++ +R ++ L+P + + + Q +R Sbjct: 209 MLIRLDLIAQLGYEEKERISDEINNIKDMARESLADIRSIMFDLKPLLVHEHSFCQTLRE 268 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 E E + L D+ + + LFR+ QE + N+ KHA + ++ Sbjct: 269 FFSEYEA-HYNFTTDLIVLGDDRDYDFSMEIALFRLIQEAITNVKKHAGVNHAMVKIENT 327 Query: 442 DERLMLVIEDDGSGLPPG---SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 D+ L LVI+D+G G + ++ +G+ GM+ERV GG + I GT+V V +P Sbjct: 328 DKCLRLVIKDEGRGFSVEGARANKESYGIIGMKERVEIFGGEIEIISSPGSGTQVIVRIP 387 Query: 497 QRY 499 Sbjct: 388 WEE 390 >UniRef50_Q3M1D8 Serine/threonine protein kinase and signal transduction histidine kinase with GAF and PAS/PAC sensor n=9 Tax=Bacteria RepID=Q3M1D8_ANAVT Length = 2361 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%) Query: 299 ETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQS-GQLIEQLSLG 353 + EE R +ARE+HD + Q T I Q G +++ D+ Q+ LI++L+ Sbjct: 2154 QAEEASILEERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDVEAAQAHLDLIKELART 2213 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 RR + LRP+ L++ +L+ A+ L+ ++ + E +L Sbjct: 2214 GLTEARRSVIALRPQLLEEGSLQSALHRLVAQIRAAATDTTLYYEIEGAVYSLPTEVENN 2273 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG--SGQQGFGLTGMR 471 L R+ QE L N +++A+A + ++ ++ L + D+G G G S +GFGL GM Sbjct: 2274 LLRIGQEALTNAIRYANADEIRVELVYDRDQFCLRVRDNGQGFGVGSISASEGFGLLGMS 2333 Query: 472 ERVTALGGTLHISCL--HGTRVSVSL 495 ER +G L I GT + V++ Sbjct: 2334 ERAERIGAQLTIRSQPGQGTEIIVTV 2359 >UniRef50_C0N7V6 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7V6_9GAMM Length = 442 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 11/232 (4%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 A + L+++L NQ LA + +E+ R+ ++RELHD++GQ++TA++ A Sbjct: 209 AIAAEVNNLSEALDTARQNNQALARHTMHIQENERQTMSRELHDEMGQSLTAVKAMAVAT 268 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 ++ A + + I + + VR ++ L P L DL L + L+ E + Sbjct: 269 KQ---PQAKINEISDSIIGICNHLSVVVRSMMRTLHPLSLADLGLAATLTDLVSEWQRRH 325 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ----DERLM 446 + L + L+E + ++RV QE L N+V+H++A+ + + +++ Sbjct: 326 PTLKIELNYDEAVDWLNEEVAIHVYRVVQECLTNVVRHSEATQAMVVVRRHLIKGRNQVV 385 Query: 447 LVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + +ED+G G + +GFG+ GMRERV ++GG G RV +P Sbjct: 386 IRVEDNGIG--GSTEGEGFGVLGMRERVESMGGQFVFESNGNLGVRVRAWMP 435 >UniRef50_Q13QX0 Periplasmic Sensor signal transduction Histidine Kinase n=3 Tax=Burkholderia RepID=Q13QX0_BURXL Length = 336 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 15/237 (6%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 R L + ++ LA N+ LA + L+ +E RR +ARELHD++GQ + AI A ++ L+ Sbjct: 90 RRCALEEQAERLLAENRRLANQALQAQELERRHLARELHDELGQYLNAISLDAARIRDLS 149 Query: 335 -ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 A V + + Q + VY + ++ RLRP LD+ L A+ + Sbjct: 150 SAREPEVHRVSLGLIQSASHVYRQIGGMIRRLRPIGLDEFGLPSALEHCVDGWRERLPDA 209 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD----------- 442 L D + LS+ +TL+R+ QEGL N+ K A + V + + Sbjct: 210 SFSLTIEGDFTGLSDALTITLYRLVQEGLTNVSKFARTARVEVFMVRAPREARERQDGRL 269 Query: 443 -ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + +++ + DDG G + G GL GMRERV ALGG H++ G +P Sbjct: 270 VDEIVVTMADDGPGADLDKPRGGLGLIGMRERVEALGGEFHVASRPEGGFLFCARVP 326 >UniRef50_Q5NZZ4 Two-component system sensor kinase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZZ4_AZOSE Length = 341 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 8/240 (3%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 +L G+++ + R+ Q L + R + LA L + E +R +ARE+HD +G ++ Sbjct: 91 AALAGVVIDVSERVRRD--QDLHRSRRRLRELASYLNSSREELRSQLAREVHDVLGGMLS 148 Query: 322 AIRTQAGIVQRLAADNA--SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 +I+ +QR ++ A +++ Q + L D R++ LRPR LD L L AI Sbjct: 149 SIKLDVFRIQRRSSGPALAEIQEITQELLPLVQDTIDTARQISDELRPRMLDTLGLVAAI 208 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 RS + I+ E LS FRV QE L N+ +HA A V ++ Sbjct: 209 RSELEAFGRRNE-ILVGFMMEGAEPELSAETATQCFRVFQEALTNVGRHAQAETVEVRVR 267 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 +D R + + DDG G+ S ++G G+ M ER ++GG+L++ GT V +++P Sbjct: 268 NRDGRFEMQVRDDGKGIDRPSMREGSIGMLSMAERARSIGGSLYVHARAGGGTVVLLAVP 327 >UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169369A Length = 224 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 9/214 (4%) Query: 289 RNQHLAERL-LETEESVRRDVARELHDDIGQTITAIRTQA-GIVQRLAADNASVKQSGQL 346 N LAE+ + R+ +ARELHD + Q + AI A ++ L D ++ L Sbjct: 4 HNAQLAEQARVSAIVEERQRLARELHDAVSQQLFAISMTATAALRTLDKDFDKAQRQIFL 63 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES-A 405 IE++S +R LL LRP L+ L + L++E++ + + + +DE Sbjct: 64 IEEMSAVAQSEMRALLLHLRPVHLEGNPLAVGLHKLLQELKAK---VPIEIVEDLDEEIR 120 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP-PGSGQQG 464 L + LFR+ QE L+N ++H+ AS + ++ + + L L I D+G G + Q Sbjct: 121 LPKGIEDHLFRIVQEALSNSLRHSKASKLEVKLHHRGDGLRLSIRDNGIGFEIDNTKQAS 180 Query: 465 FGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 +GL MRERV +GG+L I GTR+ + +P Sbjct: 181 YGLHTMRERVNEIGGSLQIITAPGKGTRIEIRVP 214 >UniRef50_Q1NT92 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerisation and phosphoacceptor region n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NT92_9DELT Length = 488 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 5/230 (2%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 +++L +S +++ + ++++ +E R+ +ARELHD GQT+ +I + +++ Sbjct: 247 MVKQLARAEESRREKDRLRRDFLQKVIAGQEGERKRIARELHDQTGQTLASIMVELKMLE 306 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 A D +++ ++Q A+ L LRP LDD+ L A+ + ++ + Sbjct: 307 NSARDQE-IRRRIASLKQSITTEISALHDLAVTLRPSVLDDMGLGPALEMFVNDLRRRHQ 365 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 V + ++R+ QE + N V+HA + + Q R+ V+ED Sbjct: 366 LPVRLTMVGFGQQRPDSATETCVYRIIQEAVLNAVRHARPREIRILLEWQRTRIRGVVED 425 Query: 452 DGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 DG G P + GL GM ER L GTL I GT V ++P Sbjct: 426 DGQGFDPEILASTDHLGLYGMVERAQLLNGTLSIDSEPGQGTMVVFAVPL 475 >UniRef50_C6J7D3 ATP-binding region ATPase domain-containing protein n=2 Tax=Bacillales RepID=C6J7D3_9BACL Length = 356 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 28/328 (8%) Query: 194 VISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPV 253 ++ +L G ++ + + +++ +W + + A IA L I IA + + Sbjct: 14 LLCYFLLTGSLTAVAFYIGTTTGVIVVSDSWVWIYDMAGIAVLALIIGYIAGRRIQGKID 73 Query: 254 DLLLSLLVQSLTGLLL----------GAGIQRLRELNQSLQKELARNQHLAERLLETEE- 302 L L++L + L + Q + +++K++ Q L E+ + +E Sbjct: 74 HLHLNMLQVAKGNLSVRMPETADQTFNGVYQEFNNMIDAMEKKMQLLQQLGEQEVVEKEQ 133 Query: 303 -------SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQS-GQLIEQLSLGV 354 RR +AR+LHD + Q + AI A + ++ +NA+ ++ + Q+S Sbjct: 134 AAEKAVLEERRRLARDLHDTVSQQLFAIHMAASSLPKVLENNATQAETVLNQLIQMSNTA 193 Query: 355 YDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG--RGIVSHLEWRIDESALSENQRV 412 +R L+ +LRP +L +L +A+ + + +GI ++ + D +SE + Sbjct: 194 QKQMRALIAQLRPMELVGKSLAEALDQWFPDYCRQNGLKGIK-DMDIQGD---MSEAKEH 249 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMR 471 LF + QE + NIVKHA AS V+L + +++L I DDG G +QG +GLT M+ Sbjct: 250 QLFLIIQEAMANIVKHAGASMVSLSLREGPRQVVLSISDDGQGFSSTYQKQGSYGLTTMK 309 Query: 472 ERVTALGGTLHISCLH--GTRVSVSLPQ 497 ER LGG I GT + V +P+ Sbjct: 310 ERAEKLGGNAEIISKPGAGTTIRVHIPK 337 >UniRef50_A9B046 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B046_HERA2 Length = 546 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 142/368 (38%), Gaps = 26/368 (7%) Query: 143 LTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLG 202 L G + + + +YL T + + V + R R L ++ + +++ Sbjct: 182 AALAGSDDIDQLTWKYENYLVIATPVRDQANQVIGALYVRSRPLSQNQVIVALLMFVIFI 241 Query: 203 LPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQ 262 + + + YGW A L+ D LS+ V Sbjct: 242 A-------SSIVSIIANALIGMVYGWFVARNFV----RRLVHLTQATDSLAAGDLSVRVN 290 Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE--------SVRRDVARELHD 314 + +G +R + Q L+ + + LA+R E R +AR+LHD Sbjct: 291 DGSIDEIGHLARRFDSMAQQLESNVKMLRQLADRNAALVEQAGQLAIVEERNRLARDLHD 350 Query: 315 DIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 + Q + ++ A + L A + + + Q++ R L+ LRP L D Sbjct: 351 SVSQELFSVTMLAAAARNLLPAQPDKARSQVEQLSQMAQRALHETRGLIFALRPAALGDQ 410 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L A+R L E +G+ L E + + L+R+CQE L N+ KH+ ++ Sbjct: 411 GLVPALRQLTEE-AARRQGLQIELNTNG-ERRIPLDHEQALYRICQEALANVTKHSGVNS 468 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGSGQQGF--GLTGMRERVTALGGTLHISCL--HGT 489 ++ + R L + D G G + GL ++ER A+GGT+ ++ GT Sbjct: 469 ASVSLEYEAHRTTLEVRDRGRGFDQDKPRNSHSLGLISIQERAKAVGGTVELTAAPGQGT 528 Query: 490 RVSVSLPQ 497 + + +P+ Sbjct: 529 SLRIVVPR 536 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P09835 Sensor protein uhpB n=121 Tax=Gammaproteobacteri... 494 e-138 UniRef50_D0YYF7 Sensor histidine protein kinase UhpB glucose-6-p... 438 e-121 UniRef50_A4W4T8 Integral membrane sensor signal transduction his... 435 e-120 UniRef50_D0M861 Sensor histidine protein kinase UhpB glucose-6-p... 415 e-114 UniRef50_Q65Q67 BaeS protein n=5 Tax=Pasteurellaceae RepID=Q65Q6... 388 e-106 UniRef50_A8G803 Integral membrane sensor signal transduction his... 379 e-104 UniRef50_C5BB53 Sensor protein UhpB n=2 Tax=Edwardsiella RepID=C... 360 8e-98 UniRef50_A5EZW7 Sensor protein UhpB n=35 Tax=Vibrionaceae RepID=... 355 2e-96 UniRef50_A1JTJ3 Sensor protein n=48 Tax=Enterobacteriaceae RepID... 353 7e-96 UniRef50_D2TKU9 Two-component system sensor histidine kinase n=1... 334 5e-90 UniRef50_Q3IGR8 Sensory histidine kinase in two-component regula... 308 3e-82 UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9... 287 6e-76 UniRef50_UPI0000E0F7AF sensory histidine kinase in two-component... 280 9e-74 UniRef50_UPI0001AEBEC0 2-keto-4-pentenoate hydratase, putative n... 279 2e-73 UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syn... 275 2e-72 UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales... 270 1e-70 UniRef50_C0A2M0 Signal transduction histidine kinase-like protei... 264 4e-69 UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX... 264 5e-69 UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteri... 264 9e-69 UniRef50_Q1H355 Sensor protein n=3 Tax=Methylophilaceae RepID=Q1... 260 7e-68 UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ... 259 1e-67 UniRef50_C0N6H6 Histidine kinase domain protein n=1 Tax=Methylop... 256 1e-66 UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3... 256 1e-66 UniRef50_Q0KDJ4 Signal transduction histidine kinase containing ... 256 1e-66 UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinas... 256 2e-66 UniRef50_B6JD37 Signal transduction histidine kinase containing ... 255 3e-66 UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinas... 255 3e-66 UniRef50_UPI0000E0F7D9 sensory histidine kinase in two-component... 254 4e-66 UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q4... 253 1e-65 UniRef50_A0LKW7 PAS/PAC sensor signal transduction histidine kin... 253 2e-65 UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinas... 252 2e-65 UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=... 252 3e-65 UniRef50_Q1H352 Signal transduction histidine kinase, glucose-6-... 251 4e-65 UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafn... 250 6e-65 UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kin... 250 7e-65 UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kin... 250 8e-65 UniRef50_D1CE67 Multi-sensor signal transduction histidine kinas... 250 9e-65 UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafnie... 249 1e-64 UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinas... 249 2e-64 UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinas... 249 3e-64 UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinas... 248 3e-64 UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kin... 248 5e-64 UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Ox... 247 5e-64 UniRef50_Q0B944 Multi-sensor signal transduction histidine kinas... 247 5e-64 UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 ... 247 6e-64 UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Br... 247 6e-64 UniRef50_C0A2L7 Signal transduction histidine kinase-like protei... 245 2e-63 UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kin... 245 3e-63 UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophi... 245 3e-63 UniRef50_A0LPI6 PAS/PAC sensor signal transduction histidine kin... 244 4e-63 UniRef50_C6XAP9 PAS/PAC sensor signal transduction histidine kin... 244 6e-63 UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kin... 244 9e-63 UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus N... 242 2e-62 UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=T... 242 2e-62 UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinas... 242 3e-62 UniRef50_Q01NC5 Integral membrane sensor signal transduction his... 242 3e-62 UniRef50_Q39TN6 PAS/PAC sensor signal transduction histidine kin... 241 4e-62 UniRef50_A1HRV6 Integral membrane sensor signal transduction his... 240 6e-62 UniRef50_C0GKL6 Histidine kinase n=1 Tax=Dethiobacter alkaliphil... 240 6e-62 UniRef50_B8G147 Multi-sensor signal transduction histidine kinas... 240 8e-62 UniRef50_A1HU07 Integral membrane sensor signal transduction his... 240 1e-61 UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kin... 240 1e-61 UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophi... 239 1e-61 UniRef50_B4UAL2 Integral membrane sensor signal transduction his... 239 2e-61 UniRef50_UPI000174566C two-component hybrid sensor and regulator... 239 2e-61 UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus... 239 2e-61 UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanth... 239 2e-61 UniRef50_A0LNC5 PAS/PAC sensor signal transduction histidine kin... 239 2e-61 UniRef50_B8CZJ7 Integral membrane sensor signal transduction his... 239 2e-61 UniRef50_B2A6W3 Integral membrane sensor signal transduction his... 238 3e-61 UniRef50_C6P0E7 PAS/PAC sensor signal transduction histidine kin... 238 3e-61 UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kin... 238 4e-61 UniRef50_A6GQJ7 PAS/PAC sensor signal transduction histidine kin... 237 6e-61 UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides ... 237 6e-61 UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kin... 237 6e-61 UniRef50_UPI00016AFAA4 response regulator/sensory box histidine ... 237 9e-61 UniRef50_UPI0001693FB4 two-component sensor histidine kinase of ... 236 1e-60 UniRef50_C9RTT5 PAS/PAC sensor signal transduction histidine kin... 236 2e-60 UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kin... 236 2e-60 UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine... 236 2e-60 UniRef50_B2AKD3 Putative multi-sensor signal transduction histid... 236 2e-60 UniRef50_Q5NZX5 Putative sensory protein, two-component system n... 235 2e-60 UniRef50_A5FQU4 PAS/PAC sensor signal transduction histidine kin... 235 2e-60 UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobac... 235 2e-60 UniRef50_C0N6J6 ATPase, histidine kinase-, DNA gyrase B-, and HS... 235 2e-60 UniRef50_A6WW19 Integral membrane sensor signal transduction his... 235 2e-60 UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Sy... 235 3e-60 UniRef50_A0LN82 Response regulator receiver sensor signal transd... 235 3e-60 UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Lab... 235 3e-60 UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylo... 235 3e-60 UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4... 235 4e-60 UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Bu... 235 4e-60 UniRef50_A6TSW3 Histidine kinase n=2 Tax=Alkaliphilus RepID=A6TS... 235 4e-60 UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kin... 235 4e-60 UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinas... 235 4e-60 UniRef50_B0P062 Putative uncharacterized protein n=1 Tax=Clostri... 234 5e-60 UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax... 234 5e-60 UniRef50_Q24Z69 Putative uncharacterized protein n=1 Tax=Desulfi... 234 5e-60 UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus Re... 234 6e-60 UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kin... 234 7e-60 UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=De... 234 7e-60 UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulat... 234 8e-60 UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinas... 234 9e-60 UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobact... 233 1e-59 UniRef50_B1YLL4 Histidine kinase n=2 Tax=Exiguobacterium RepID=B... 232 2e-59 UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=... 232 2e-59 UniRef50_B1Y742 Response regulator receiver sensor signal transd... 232 2e-59 UniRef50_A9B046 Integral membrane sensor signal transduction his... 232 2e-59 UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Li... 232 2e-59 UniRef50_P54663 Sensor protein degS n=33 Tax=Bacillales RepID=DE... 232 3e-59 UniRef50_C3BDP5 Putative uncharacterized protein n=3 Tax=Bacillu... 232 3e-59 UniRef50_C9LVI4 Histidine kinase n=1 Tax=Selenomonas sputigena A... 231 5e-59 UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 T... 231 6e-59 UniRef50_A8LRP9 Integral membrane sensor signal transduction his... 231 6e-59 UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Sy... 231 6e-59 UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Stre... 230 7e-59 UniRef50_A5F1R9 Sensor histidine kinase n=52 Tax=Vibrionales Rep... 230 8e-59 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 230 8e-59 UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kin... 230 8e-59 UniRef50_C5CVV4 Histidine kinase n=2 Tax=Burkholderiales RepID=C... 230 1e-58 UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kin... 229 2e-58 UniRef50_B9XGC5 Response regulator receiver sensor signal transd... 229 2e-58 UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kin... 229 2e-58 UniRef50_B8FX95 Sensor DegS domain protein n=3 Tax=cellular orga... 229 2e-58 UniRef50_Q46PY7 ATP-binding region, ATPase-like:MASE1:Histidine ... 229 2e-58 UniRef50_C6D5A2 Histidine kinase n=5 Tax=Bacillales RepID=C6D5A2... 229 2e-58 UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase ... 229 2e-58 UniRef50_Q251B4 Putative uncharacterized protein n=1 Tax=Desulfi... 229 2e-58 UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Be... 228 3e-58 UniRef50_A0LNB4 PAS/PAC sensor signal transduction histidine kin... 228 3e-58 UniRef50_B9X9T9 Histidine kinase n=1 Tax=bacterium Ellin514 RepI... 228 3e-58 UniRef50_Q7X326 Putative sensory transduction histidine kinase n... 228 4e-58 UniRef50_UPI0001692E35 hypothetical protein Plarl_02603 n=1 Tax=... 228 4e-58 UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinas... 228 5e-58 UniRef50_Q2BPE6 Sensor histidine kinase n=1 Tax=Neptuniibacter c... 227 5e-58 UniRef50_C9PG27 Sensor histidine kinase n=2 Tax=Vibrio RepID=C9P... 227 6e-58 UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM... 227 6e-58 UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Ba... 227 6e-58 UniRef50_B0TH54 Sensor histidine kinase, putative n=1 Tax=Heliob... 227 8e-58 UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 ... 226 1e-57 UniRef50_A1K959 Putative sensory box histidine kinase n=1 Tax=Az... 226 2e-57 UniRef50_Q01N85 Integral membrane sensor signal transduction his... 226 2e-57 UniRef50_B1ZVP9 Response regulator receiver sensor signal transd... 226 2e-57 UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinas... 225 2e-57 UniRef50_Q747N5 Sensory box histidine kinase n=2 Tax=Geobacter R... 225 3e-57 UniRef50_C1DSJ2 Intracellular sensory histidine protein kinase, ... 225 3e-57 UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID... 225 4e-57 UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinas... 224 5e-57 UniRef50_B1XZ31 Histidine kinase n=5 Tax=cellular organisms RepI... 224 6e-57 UniRef50_C1A5E7 Two-component histidine kinase n=1 Tax=Gemmatimo... 224 7e-57 UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp.... 223 8e-57 UniRef50_Q60AR7 Sensor protein n=1 Tax=Methylococcus capsulatus ... 223 8e-57 UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae... 223 9e-57 UniRef50_B1KE05 Histidine kinase n=1 Tax=Shewanella woodyi ATCC ... 223 1e-56 UniRef50_B2J8K5 Integral membrane sensor signal transduction his... 223 1e-56 UniRef50_Q5P5H6 Two-component sensor n=1 Tax=Aromatoleum aromati... 223 1e-56 UniRef50_Q0S9L9 Sensor kinase, two-component system n=8 Tax=Acti... 223 1e-56 UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=... 223 1e-56 UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter s... 223 1e-56 UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine... 223 1e-56 UniRef50_A5GBT2 Integral membrane sensor signal transduction his... 223 1e-56 UniRef50_C7QZV7 Histidine kinase n=3 Tax=Micrococcineae RepID=C7... 223 2e-56 UniRef50_C0GH42 Multi-sensor signal transduction histidine kinas... 222 2e-56 UniRef50_A7NRQ7 Integral membrane sensor signal transduction his... 222 2e-56 UniRef50_C3PKA7 Two-component system sensor kinase n=2 Tax=Coryn... 222 2e-56 UniRef50_A5EGA4 Bacteriophytochrome n=13 Tax=Rhizobiales RepID=A... 222 2e-56 UniRef50_B9TCE7 Sensory transduction histidine kinase, putative ... 222 3e-56 UniRef50_Q3M1D8 Serine/threonine protein kinase and signal trans... 221 5e-56 UniRef50_C7LUF4 PAS/PAC sensor signal transduction histidine kin... 221 5e-56 UniRef50_UPI00016C46BE putative PAS/PAC sensor protein n=1 Tax=G... 221 6e-56 UniRef50_D1ABJ2 Histidine kinase n=1 Tax=Thermomonospora curvata... 221 6e-56 UniRef50_A1WDW7 Multi-sensor signal transduction histidine kinas... 221 6e-56 UniRef50_A5FS37 PAS/PAC sensor signal transduction histidine kin... 221 6e-56 UniRef50_B3E9K4 Response regulator receiver sensor signal transd... 220 8e-56 UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Ba... 220 9e-56 UniRef50_C8WS09 PAS/PAC sensor signal transduction histidine kin... 220 9e-56 UniRef50_C0A3D8 Signal transduction histidine kinase-like protei... 220 9e-56 UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID... 220 1e-55 UniRef50_D1Y8Y4 Histidine kinase n=2 Tax=Propionibacterium acnes... 220 1e-55 UniRef50_A2SDA5 Signal transduction histidine kinase-like protei... 220 1e-55 UniRef50_Q7WNB8 Two-component system sensor kinase n=2 Tax=Borde... 219 1e-55 UniRef50_A1VQL5 Integral membrane sensor signal transduction his... 219 2e-55 UniRef50_Q01NL1 Histidine kinase n=1 Tax=Candidatus Solibacter u... 219 2e-55 UniRef50_C6WWI1 Histidine kinase n=1 Tax=Methylotenera mobilis J... 219 2e-55 UniRef50_A1SCE2 Histidine kinase, dimerisation and phosphoaccept... 219 2e-55 UniRef50_D2ARZ7 Histidine kinase n=1 Tax=Streptosporangium roseu... 219 2e-55 UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseu... 219 2e-55 UniRef50_Q1NT92 ATP-binding region, ATPase-like:Histidine kinase... 219 2e-55 UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderi... 218 3e-55 UniRef50_UPI0001B5513A putative two-component system sensor kina... 218 3e-55 UniRef50_C0VWJ7 Two-component sensory kinase n=2 Tax=Corynebacte... 218 3e-55 UniRef50_B5VVU4 Integral membrane sensor signal transduction his... 218 3e-55 UniRef50_Q01SI4 Sensor protein n=1 Tax=Candidatus Solibacter usi... 218 3e-55 UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kin... 218 3e-55 UniRef50_B5I6F0 Two component system sensor kinase n=9 Tax=Strep... 218 4e-55 UniRef50_Q3BTZ2 Sensor protein n=13 Tax=Xanthomonadaceae RepID=Q... 218 4e-55 UniRef50_C4DEB2 Signal transduction histidine kinase, COG4585 n=... 218 4e-55 UniRef50_Q0EZ32 HrpX related protein n=1 Tax=Mariprofundus ferro... 218 5e-55 UniRef50_UPI0001B54039 histidine kinase n=1 Tax=Streptomyces sp.... 217 6e-55 UniRef50_C8XB57 Histidine kinase n=2 Tax=Actinomycetales RepID=C... 217 6e-55 UniRef50_C7ME45 Signal transduction histidine kinase n=1 Tax=Bra... 217 6e-55 UniRef50_A4JE38 PAS/PAC sensor signal transduction histidine kin... 217 6e-55 UniRef50_C6J152 Histidine kinase dimerization and phosphoaccepto... 217 7e-55 UniRef50_C4DQ88 Signal transduction histidine kinase, COG4585 n=... 217 7e-55 UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C... 217 8e-55 UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thio... 217 1e-54 UniRef50_Q8YV44 Two-component sensor histidine kinase n=3 Tax=Cy... 216 1e-54 UniRef50_Q220B2 Response regulator receiver sensor signal transd... 216 2e-54 UniRef50_Q0A524 Signal transduction histidine kinase, glucose-6-... 215 3e-54 UniRef50_B9J9Z4 Two-component sensor histidine kinase protein n=... 215 3e-54 UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Co... 215 4e-54 UniRef50_C0GIE2 Integral membrane sensor signal transduction his... 215 4e-54 UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 215 4e-54 UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC... 215 4e-54 UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine... 214 5e-54 UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuri... 214 5e-54 UniRef50_B0CC26 Two-component sensor histidine kinase n=1 Tax=Ac... 213 9e-54 UniRef50_C9RWH5 Integral membrane sensor signal transduction his... 213 1e-53 UniRef50_A9B913 Multi-sensor signal transduction histidine kinas... 213 1e-53 UniRef50_A6T1A4 Signal transduction histidine kinase n=2 Tax=Oxa... 213 1e-53 UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=... 213 1e-53 UniRef50_B0UCY8 Integral membrane sensor signal transduction his... 213 1e-53 UniRef50_D1A2S1 Histidine kinase n=2 Tax=Streptosporangineae Rep... 213 1e-53 UniRef50_A0QSI7 Sensor histidine kinase n=6 Tax=Mycobacterium Re... 213 1e-53 UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinas... 213 1e-53 UniRef50_C6E3E0 PAS/PAC sensor signal transduction histidine kin... 213 2e-53 UniRef50_C9LUT1 Sensor histidine kinase n=1 Tax=Selenomonas sput... 213 2e-53 UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=... 212 2e-53 UniRef50_B5JFN8 Histidine kinase domain protein n=1 Tax=Verrucom... 212 2e-53 UniRef50_C9NA65 Histidine kinase n=5 Tax=Streptomyces RepID=C9NA... 212 2e-53 UniRef50_UPI00017893B7 integral membrane sensor signal transduct... 212 2e-53 UniRef50_B5I029 Sensor kinase n=1 Tax=Streptomyces sviceus ATCC ... 212 3e-53 UniRef50_C7RKP8 PAS/PAC sensor signal transduction histidine kin... 212 3e-53 UniRef50_A9BNQ5 Histidine kinase n=1 Tax=Delftia acidovorans SPH... 212 3e-53 UniRef50_D1VBH0 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID... 212 4e-53 UniRef50_B7L2Y8 Histidine kinase n=1 Tax=Methylobacterium chloro... 212 4e-53 UniRef50_C1DEQ8 Periplasmic sensory histidine protein kinase, tw... 211 5e-53 UniRef50_C5ATJ2 Sensor histidine kinase n=1 Tax=Methylobacterium... 211 5e-53 UniRef50_D1BSG5 Histidine kinase n=1 Tax=Xylanimonas cellulosily... 211 6e-53 UniRef50_C1YQX8 Signal transduction histidine kinase, COG4585 n=... 210 7e-53 UniRef50_B9L1R7 Probable transmembrane two component system sens... 210 7e-53 UniRef50_B1ZPK4 Histidine kinase n=1 Tax=Opitutus terrae PB90-1 ... 210 8e-53 UniRef50_UPI0001C314AD GAF sensor signal transduction histidine ... 210 8e-53 UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Sy... 210 8e-53 UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibaci... 209 2e-52 UniRef50_A7NID8 Integral membrane sensor signal transduction his... 209 2e-52 UniRef50_B8EMD2 Integral membrane sensor signal transduction his... 209 2e-52 UniRef50_C1YH63 Signal transduction histidine kinase, COG4585 n=... 209 2e-52 UniRef50_A1WJX0 Response regulator receiver sensor signal transd... 209 2e-52 UniRef50_C4DDE2 Signal transduction histidine kinase, COG4585 n=... 209 2e-52 Sequences not found previously or not previously below threshold: >UniRef50_P09835 Sensor protein uhpB n=121 Tax=Gammaproteobacteria RepID=UHPB_ECOLI Length = 500 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 500/500 (100%), Positives = 500/500 (100%) Query: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW Sbjct: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 Query: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT Sbjct: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 Query: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN Sbjct: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 Query: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI Sbjct: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 Query: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET Sbjct: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR Sbjct: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 Query: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE Sbjct: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT Sbjct: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 Query: 481 LHISCLHGTRVSVSLPQRYV 500 LHISCLHGTRVSVSLPQRYV Sbjct: 481 LHISCLHGTRVSVSLPQRYV 500 >UniRef50_D0YYF7 Sensor histidine protein kinase UhpB glucose-6-phosphate specific n=10 Tax=Gammaproteobacteria RepID=D0YYF7_LISDA Length = 510 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 219/510 (42%), Positives = 311/510 (60%), Gaps = 23/510 (4%) Query: 6 SRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLG 65 + ++T I FF+ WFCLW IS + + ++A+L FPF RLG++L P+ YW VL G Sbjct: 3 NYIVTSICSFFLVLCTWFCLWIISSYFIMEAELAILFFPFAFRLGMVLHTPKKYWFVLYG 62 Query: 66 AEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRD------WRTLLLQGAAL 119 AEW L L + + ++I S+ +L V ++ ++ W L + GA + Sbjct: 63 AEWFLTISLAILLAQPQWISVLISSIASLPIVWYADKFYLSKEASSATQWYQLSILGAVI 122 Query: 120 TAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPI 179 +LL L G S LL+++TGGL + P C + W+YL +W PL ++V+ P+ Sbjct: 123 GITSLLNMLIVSHQGVSSGLVLLVSITGGLMIVPSCYLIWNYLFKQSWSPLTANVVAYPV 182 Query: 180 NWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNA 239 R RH++ Y ++F++S+ QL LP+EL RF PFCLA+PII LA+ YGWQGAL+ TL+N+ Sbjct: 183 ALRARHVIVYAVVFLLSILAQLLLPEELKRFAPFCLAIPIILLAFRYGWQGALLGTLLNS 242 Query: 240 IALIASQTWRD--HPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERL 297 IALIA ++ DL+LSL Q+LTG+LLG G+QR RELN L+ EL RNQ L+ +L Sbjct: 243 IALIAVRSGVSNIEITDLMLSLSAQTLTGILLGIGVQRQRELNLYLRHELERNQSLSRQL 302 Query: 298 LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDA 357 ++ EESVR+++ARELHD+IGQ ITAIR QAGI++R+ ++ +IE LSL VYD Sbjct: 303 VKAEESVRKNIARELHDEIGQNITAIRMQAGILKRVETSP-MGEKCASMIEGLSLNVYDT 361 Query: 358 VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA---LSENQRVTL 414 + LL +LRP+ LDDL L+ AI L+ EL + L W ++S ++ VTL Sbjct: 362 TKGLLTQLRPKTLDDLGLKAAIEQLI--FELRSHQMSVELNWFPEQSETITFNDETNVTL 419 Query: 415 FRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERV 474 +R+CQE LNNI K+A A+ V L DE++ L I D+G G +GFGL GMRERV Sbjct: 420 YRICQEALNNIAKYAQATKVVLNFHF-DEQIELSISDNGIGFKQEDTLKGFGLRGMRERV 478 Query: 475 TALGGTLHISCLH--------GTRVSVSLP 496 ALGG I+ + GT++ V LP Sbjct: 479 QALGGEFSITSIPKYSEQIKSGTQLHVRLP 508 >UniRef50_A4W4T8 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Enterobacter RepID=A4W4T8_ENT38 Length = 499 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 423/498 (84%), Positives = 452/498 (90%), Gaps = 1/498 (0%) Query: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 M FSRL++ +A FFIFSAAWFCLWSISLHLVERP++AVLLFPFGLRLGLMLQCPRGYW Sbjct: 1 MNPFFSRLVSGVASFFIFSAAWFCLWSISLHLVERPELAVLLFPFGLRLGLMLQCPRGYW 60 Query: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT 120 PVLLGAEWLL++WL Q V L H PLL+IG +LTLLPVALISRYRHQRDWRTLL QGAAL Sbjct: 61 PVLLGAEWLLLFWLAQEVALAHLPLLIIGGVLTLLPVALISRYRHQRDWRTLLWQGAALI 120 Query: 121 AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN 180 AAALLQSLPW+ +E NA LLTLTGGLTLAP CLV WHYL + W PLGP+LVSQP+N Sbjct: 121 AAALLQSLPWIGQ-QEMLNAFLLTLTGGLTLAPTCLVIWHYLTSTVWQPLGPALVSQPVN 179 Query: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 240 WR RHL+WYLLLFV+SLWLQLGLP ELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI Sbjct: 180 WRARHLIWYLLLFVVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI 239 Query: 241 ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET 300 ALIASQTW DHPVDLLLSLL QSLTGLLLGAGIQRLRELNQSLQ ELARN+ LAERL+ET Sbjct: 240 ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQNELARNRRLAERLVET 299 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR 360 EESVR++VARELHDDIGQTITAIRTQAGIVQRLA +N V QSG IEQLSLGVYD+VRR Sbjct: 300 EESVRQEVARELHDDIGQTITAIRTQAGIVQRLAPENGGVIQSGAHIEQLSLGVYDSVRR 359 Query: 361 LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 LLGRLRPRQLDDL+L QA+RSLMREMELE RGIVSHL+W IDES LSE QRVTLFRVCQE Sbjct: 360 LLGRLRPRQLDDLSLAQAVRSLMREMELESRGIVSHLDWHIDESTLSEGQRVTLFRVCQE 419 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 GLNNIVKHA+ASAVTL+GWQQDERLML+IEDDG GLPPGSGQQGFGL GMRERVTALGGT Sbjct: 420 GLNNIVKHANASAVTLKGWQQDERLMLLIEDDGCGLPPGSGQQGFGLAGMRERVTALGGT 479 Query: 481 LHISCLHGTRVSVSLPQR 498 L ISC HGTRVSVSLP+R Sbjct: 480 LAISCTHGTRVSVSLPRR 497 >UniRef50_D0M861 Sensor histidine protein kinase UhpB glucose-6-phosphate specific n=18 Tax=Gammaproteobacteria RepID=D0M861_VIBSE Length = 500 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 209/494 (42%), Positives = 312/494 (63%), Gaps = 7/494 (1%) Query: 9 ITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEW 68 +T I F+ + AWFCLW I+ + V P++A+LLFPF LRLG+ L YWP + +EW Sbjct: 6 VTTICGLFVMACAWFCLWVIAYYFVNDPELAILLFPFALRLGIALHTRTAYWPTIYVSEW 65 Query: 69 LLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSL 128 L L + + ++I S+ ++ + +Y + R L + G + +A + + Sbjct: 66 ALTIALATLLEQPQWLTVLIASVASIPVTLIAKKYYYGDQNRHLAVMGVVIIISAFINVM 125 Query: 129 PWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVW 188 +H + L +++GGL + P+C + W YL + W PL L+S + ++ RH+V Sbjct: 126 AVGFHVPSVYMVWLASISGGLLVVPMCYLLWSYLFQSRWSPLSSLLLSNAVVFQVRHIVL 185 Query: 189 YLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTW 248 Y LL + S+ +Q LP+EL RF PFC+A+PII LA YGWQGAL+AT++N+IALIA+++ Sbjct: 186 YALLLIGSILVQTSLPEELKRFAPFCMAIPIIVLALRYGWQGALLATMLNSIALIAARSG 245 Query: 249 RDHP--VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRR 306 + DLLLSL Q++TG++LG G+Q+ ++LN L+ ELARNQ+L+ +L++ EESVRR Sbjct: 246 VSNLEITDLLLSLSAQTITGIMLGLGVQKQKDLNHKLRGELARNQNLSRQLIKAEESVRR 305 Query: 307 DVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 D+ARELHD+IGQ ITAIRTQA I++R+ SV +IE LSL VYD +RLL +LR Sbjct: 306 DIARELHDEIGQNITAIRTQANIIKRVNNAETSVG-CADMIEGLSLNVYDTTKRLLSKLR 364 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P+ LDDL L++++ L REME G L W+ D ++LS+ +VTLFR+CQE LNN Sbjct: 365 PKMLDDLDLKESVEQLTREMEFANHGTNVQLNWQGDYTSLSDTLKVTLFRLCQESLNNAA 424 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL 486 K+A+A + ++ + + L+I DDG G +G G+ GM+ERV ALGG + I Sbjct: 425 KYAEAQLINIELTIGEAAVSLMINDDGVGFKVQDSMKGMGVRGMQERVHALGGKMVIYST 484 Query: 487 H----GTRVSVSLP 496 GT++S++LP Sbjct: 485 SDQVIGTQISITLP 498 >UniRef50_Q65Q67 BaeS protein n=5 Tax=Pasteurellaceae RepID=Q65Q67_MANSM Length = 503 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 207/504 (41%), Positives = 312/504 (61%), Gaps = 13/504 (2%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 + +IT+I +FI A+F +W+IS +L+ +A+L PF LRLG+ L P+ +W V Sbjct: 1 MNAIITLIYSWFIMLCAYFSVWAISDYLLGNSLLALLFLPFALRLGINLHTPKIFWLVSY 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAAL 124 AE+ ++ L A ++ +I S+ +L + +Y + R L +QG +L Sbjct: 61 CAEFCILSLLMYASPNEYYLPAIILSIASLPVTFIGQKYYQGNEARKLAVQGVIAVFVSL 120 Query: 125 LQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGR 184 L + + L +LTG L + P C + + YL W+PL SLV +PI+ R + Sbjct: 121 LNGIVSFSLSISFFYTFLTSLTGMLLIMPACFLGYDYLFKRKWIPLTASLVHKPISLRAK 180 Query: 185 HLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIA 244 H++ Y+LLF++++++Q+ +P+E RF F LA+PII LA+HYGWQGAL+ TL+N+IALIA Sbjct: 181 HILIYILLFLLNIFIQVDIPEEFHRFALFFLAIPIILLAYHYGWQGALLGTLLNSIALIA 240 Query: 245 SQT--WRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 S R DL LS+ Q++TG+ LG IQR R+LN SL EL RN+ L +L+ TEE Sbjct: 241 STGSFSRGELTDLFLSISAQTVTGIFLGLAIQRQRDLNNSLMVELNRNRTLTRQLINTEE 300 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLL 362 S+R++++RELHD+IGQ ITAIRTQA I++RL +++ G +IEQLSL +YD + LL Sbjct: 301 SIRKEISRELHDEIGQNITAIRTQASIMKRLETSP-KIEKVGSMIEQLSLNIYDTTKGLL 359 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI-DESALSENQRVTLFRVCQEG 421 R+RP+ LDDL L+QA+++L E++LE GI + L W L Q +TL+R+CQEG Sbjct: 360 NRIRPKMLDDLELQQALQNLFLELDLENHGISTALFWENKQNEPLDHIQEITLYRLCQEG 419 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTL 481 LNNIVK++ AS V + + + + L+I+D+G G P + + GFGL GM+ERV L G Sbjct: 420 LNNIVKYSHASQVIISVLIRKD-IELIIQDNGDGFNPETVKSGFGLQGMKERVDILCGKF 478 Query: 482 HISC--------LHGTRVSVSLPQ 497 + HGT + ++LP+ Sbjct: 479 QLISKERSVSPQQHGTTIKITLPR 502 >UniRef50_A8G803 Integral membrane sensor signal transduction histidine kinase n=50 Tax=Enterobacteriaceae RepID=A8G803_SERP5 Length = 513 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 229/505 (45%), Positives = 325/505 (64%), Gaps = 14/505 (2%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 RLIT +A FFI++ + FCLW I L++ P A+LLFPFGLR+G++LQ P +WP +L Sbjct: 1 MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGIL 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVA-----LISRYRHQR-DWRTLLLQGAA 118 A+ LL+ L G + LL + ++ + R++ +W+ L+QGA Sbjct: 61 LADLLLMVVLADQFGYGPALWASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQGAV 120 Query: 119 LTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQP 178 + AALLQ+L W E ALLL L GG T+AP CL+ WHYLA W+PL P L+ +P Sbjct: 121 VAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLLWHYLARQIWVPLEPGLIHKP 180 Query: 179 INWRGRHLVWYLLLFVISLWLQLGL-PDELSRFTPFCLALPIIALAWHYGWQGALIATLM 237 + R RHL YLLLF +S+WLQ + EL RF PFCLA+PI+ +++ YGWQGAL+ATL+ Sbjct: 181 VTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLATLL 240 Query: 238 NAIALIASQTWRDH-PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAER 296 N + L+A++ + DLLLSLL QSLTGLLLGAGIQR RELNQ L+ L N+ LA Sbjct: 241 NGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLARA 300 Query: 297 LLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYD 356 L+ EE RR+VARELHD++GQTIT IRTQA I++RLA V + I+ L+L VYD Sbjct: 301 LVTAEEQTRREVARELHDEVGQTITVIRTQASIIKRLAPQP-QVMGCAEAIDTLALRVYD 359 Query: 357 AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFR 416 V +L +L P L++L L A+ +++RE + +VS ++W++ + L E ++TL+R Sbjct: 360 GVHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVMQWQVPDELLDETLKITLYR 419 Query: 417 VCQEGLNNIVKHADASAVTL--QGWQQDER---LMLVIEDDGSGLPPGSGQQGFGLTGMR 471 VCQEG+ N+ +HA AS + L + Q+ R ++L I D+G G+ + G+GL GM+ Sbjct: 420 VCQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRGMQ 479 Query: 472 ERVTALGGTLHISCLHGTRVSVSLP 496 ER++ALGG L ++ +GT ++V LP Sbjct: 480 ERISALGGRLRLTSENGTCLNVILP 504 >UniRef50_C5BB53 Sensor protein UhpB n=2 Tax=Edwardsiella RepID=C5BB53_EDWI9 Length = 510 Score = 360 bits (924), Expect = 8e-98, Method: Composition-based stats. Identities = 237/502 (47%), Positives = 323/502 (64%), Gaps = 11/502 (2%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 RLI+ IA FF ++ A FCLW+I LV P A+LLFPFGLR+G++LQ P YWP +L Sbjct: 1 MQRLISSIAIFFCYTIAGFCLWAIGAALVTAPVDALLLFPFGLRMGILLQTPHRYWPGIL 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYR------HQRDWRTLLLQGAA 118 + + +L+ +G + +G LL + +A S +WR L QGA Sbjct: 61 VGDVAVQLFLSHQLGGGSWLWGTLGGLLLCMALAWASGEWLRRQQQQGAEWRWPLQQGAL 120 Query: 119 LTAAALLQSLPW-LWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQ 177 + AALLQ+L W L G LLL L GGLT+AP CL+ WHYLA WLPL P ++ Sbjct: 121 VALAALLQALSWSLATGTMPGPPLLLGLCGGLTVAPTCLLIWHYLAQQRWLPLTPGILHC 180 Query: 178 PINWRGRHLVWYLLLFVISLWLQ-LGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL 236 P+N R RH+ YLLLF +SLWLQ L +L RF FCLA+PI+ +++ YGWQGAL+ATL Sbjct: 181 PVNLRLRHIGGYLLLFALSLWLQHLAQHADLRRFVLFCLAIPIVFMSYRYGWQGALLATL 240 Query: 237 MNAIALIASQTWRDHP-VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 +N + LIA++ D P DLLLSLL QSLTG+LLGAGI+R R+LN+ L++ LA N+ LA Sbjct: 241 LNGVVLIATEPQGDAPHRDLLLSLLAQSLTGMLLGAGIERQRDLNRQLKQRLAENRSLAR 300 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 L+ +E RR++ARELHD++GQTIT IRTQAGI++RL +D + S + IE +L VY Sbjct: 301 SLVMAQEVTRREIARELHDEVGQTITVIRTQAGIIRRL-SDEPRLLASAEAIENHALRVY 359 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 D V LL +L P L +L L A+ +L+R++ +G + L W ID++AL + ++TL+ Sbjct: 360 DGVHDLLAQLWPASLSNLPLSAALSALLRDLVPPEQGTTARLSWHIDDAALDDTLKITLY 419 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQ-DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERV 474 R+CQEG+ N +HA AS + +QGWQ L + I DDG G+ S G+GL G+RER+ Sbjct: 420 RLCQEGVTNACRHARASHIEVQGWQDTGGLLHVNICDDGCGVDTLSLMPGYGLRGLRERI 479 Query: 475 TALGGTLHISCLHGTRVSVSLP 496 A+GG LH+ GTR+ V LP Sbjct: 480 CAMGGELHLESHQGTRLVVILP 501 >UniRef50_A5EZW7 Sensor protein UhpB n=35 Tax=Vibrionaceae RepID=A5EZW7_VIBC3 Length = 527 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 173/516 (33%), Positives = 273/516 (52%), Gaps = 24/516 (4%) Query: 5 FSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLL 64 ++L +I F ++S + F LW++S +L P A LLFP GLRL + L Y V L Sbjct: 1 MAKLFPLIFAFVLYSISQFSLWNVSQYLSHNPLQAYLLFPTGLRLAVYLLARPTYAWVWL 60 Query: 65 GAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQG-------- 116 ++ LL + + PL+++ + L + ++ + L Sbjct: 61 LSDMLLAGAILVLLPDQSSPLMLLMPWVVWLAAVIARQHWPKLHLYWQKLLLIVALVLLH 120 Query: 117 -AALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLV 175 + L + P + + +LTGG+ L P + YL + TW PL P L+ Sbjct: 121 TILVGITFTLLAKPLHMEAETLITVSIASLTGGIVLTPFLYLVADYLRHQTWHPLSPQLI 180 Query: 176 SQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIAT 235 + + + L+W LL F + L +L L +++ F + LP I LA+ YGWQG ++A+ Sbjct: 181 HHDVKLKPKMLMWSLLFFSLGLLAELTLLEQMKPFALLIILLPTIFLAYRYGWQGGVLAS 240 Query: 236 LMNAIALIASQTWRDHP---VDLLLSLLVQSLTGLLLGAGIQR-------LRELNQSLQK 285 +N I L ++ + +LL+ + Q+ GL LG I R L+++N L K Sbjct: 241 SLNCILLATARQFSGSFSSDQELLIFMSSQAFVGLGLGIAISRQHQLALLLQKMNTRLAK 300 Query: 286 ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQ 345 EL Q LA +L+ EE +R+ VARELHD+IGQ ITAI+ Q+ + +RLA+ N KQ+ Sbjct: 301 ELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAIQIQSMLAERLAS-NDQAKQAAS 359 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 ++ L++ ++ + R+LL +LRP LD+L LE AIR L++EM +G+ L ++ Sbjct: 360 SVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLVQEMRFAEQGMTVRLNMGVNPQK 419 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGF 465 L + RVTL+R+ QE LNNI KHA A+ V + ++L ++DDG GLP +G Sbjct: 420 LDDTTRVTLYRIVQELLNNICKHAKATRVHISL-FPGSEMVLEVKDDGIGLPTDWRVRGQ 478 Query: 466 GLTGMRERVTALGGTLHISC---LHGTRVSVSLPQR 498 GL G+ ERV+ALGG L ++ GTR+ V+LP + Sbjct: 479 GLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLPTK 514 >UniRef50_A1JTJ3 Sensor protein n=48 Tax=Enterobacteriaceae RepID=A1JTJ3_YERE8 Length = 525 Score = 353 bits (907), Expect = 7e-96, Method: Composition-based stats. Identities = 176/499 (35%), Positives = 261/499 (52%), Gaps = 16/499 (3%) Query: 11 VIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLL 70 + FS +W LW+IS +L + AVLL P GLRL LM+ PR YW VLL E + Sbjct: 10 SLFLAIFFSLSWLALWTISFYLSDDGLHAVLLLPQGLRLALMILLPRRYWSVLLLTECVA 69 Query: 71 IYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQR--DWRTLLLQGAALTAAALLQSL 128 ++WL + L L+M+ L+LLP L R+ H W+ LLL AA+T ++L L Sbjct: 70 LWWL-HSEQLQPIVLIMLSPFLSLLPAELTQRFWHHYTLYWQRLLLLLAAVTGNSVLHGL 128 Query: 129 PW-LWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLV 187 W LL T TGG+ L P + + YL L + P R L+ Sbjct: 129 VLGFWLPLPLTQTLLATFTGGILLVPFTYLIYEYLKQQHIRNLFSQQMPDP-PLRTSLLI 187 Query: 188 WYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQT 247 W L+F I + +Q+ + + R + LP + +A+ +GWQG ++A ++ ++ + ++ Sbjct: 188 WCSLIFAIGVCVQIAIAPNMERLLLIFVFLPNVFMAYKFGWQGGVLAAVLGSLMITVTRQ 247 Query: 248 WRD---HPVDLLLSLLVQSLTGLLLGAGIQRLRELNQ-------SLQKELARNQHLAERL 297 +L L L Q+L GL LG I R ++L Q L++EL + L +RL Sbjct: 248 ASGAFHDLAELELFLSTQALLGLTLGIAISRQQQLAQHLHRYRNQLEQELQTRRKLMKRL 307 Query: 298 LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDA 357 + TEE VR+++ARELHD+IGQ ITAI+ QA +V R A + + + I LS ++ Sbjct: 308 VRTEEDVRKEIARELHDEIGQNITAIQIQAMLVNRSAPSP-AAQSAANQISSLSQRIHQT 366 Query: 358 VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 R+LL +LRP LD++ L+QA+ L E +GI L++ + + TL+R+ Sbjct: 367 TRQLLRQLRPPVLDEMPLDQALHHLAEEFAFAEQGIHFQLDYALPAPPGEDVVVFTLYRL 426 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTAL 477 QE LNNI KHA+A + + D + L + DDG G+P G GL G+ ERV AL Sbjct: 427 VQELLNNINKHANARNIQVSLHLTDNIITLEVRDDGMGIPVQPQGGGLGLRGIEERVRAL 486 Query: 478 GGTLHISCLHGTRVSVSLP 496 GG + GTRV V+LP Sbjct: 487 GGDWLLQRRLGTRVVVNLP 505 >UniRef50_D2TKU9 Two-component system sensor histidine kinase n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TKU9_CITRO Length = 515 Score = 334 bits (857), Expect = 5e-90, Method: Composition-based stats. Identities = 170/510 (33%), Positives = 269/510 (52%), Gaps = 17/510 (3%) Query: 1 MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW 60 M ++ + + W LW++ +L A L P G+ L L++ R YW Sbjct: 1 MSHPLRYVVISLFIVLAWGTGWLMLWTLGFYLTHNGQQAALFLPHGVYLALLILLARRYW 60 Query: 61 PVLLGAEWLLIYWL-TQAVGLTHFPLLMIGSLLTLLPVALISRYR--HQRDWRTLLLQGA 117 P L+ L++ WL ++ + +L+ L++LLP ++ R+ W+ L L Sbjct: 61 PALVLPPMLMLLWLRSEQLLSGDLLVLLAAPLVSLLPASIAQRFWQRFPLYWQRLTLLLT 120 Query: 118 ALTAAALLQSLPWL-WHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVS 176 A+T A+LL + + + L + TGG+ L P + + +L L Sbjct: 121 AVTVASLLNTALLSPLLKSPAMLSGLASFTGGVLLTPFVYLIFEFLRQQHRYQLLAQDTQ 180 Query: 177 QPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL 236 P R ++W L F+I + QL L EL R + LP + +AW +GWQG ++A L Sbjct: 181 NP-PLRTSLIIWCSLFFIIGIGTQLTLSPELERLLLIVVFLPNVVMAWKFGWQGGVLAGL 239 Query: 237 MNAIALIASQ---TWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELN-------QSLQKE 286 + ++ + ++ + ++L + L Q+L G+ LG I R + L Q L+ E Sbjct: 240 LGSMMITIARQVGVGFSNLIELEIFLATQALLGMGLGIAISRQQHLAQNLHHYRQRLEAE 299 Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQL 346 LA + L E+L+ +EE R+ +ARELHD+IGQ ITAI+ Q +V+R A D A + + Sbjct: 300 LAARRALTEKLIHSEEDTRKSLARELHDEIGQNITAIQIQTQLVKR-ARDPAQTQAAASQ 358 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 I L+ ++ + R+LL +LRP LD+L+ +A+ L+ E RGI ++R+ + Sbjct: 359 INDLARRIHHSTRQLLRQLRPPALDELSFNEALHHLLNEFAFAERGIRCRFDYRLTATPE 418 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFG 466 SE R TL+R+ QE LNN+ KHA+AS V + QQ ERL L ++D+G+G+ G GFG Sbjct: 419 SETVRFTLYRLLQELLNNVCKHAEASEVAILLCQQGERLRLEVQDNGTGIGDGQLP-GFG 477 Query: 467 LTGMRERVTALGGTLHISCLHGTRVSVSLP 496 + GMRERV+ALGG L + HGTRV V+LP Sbjct: 478 IQGMRERVSALGGELSLESRHGTRVIVNLP 507 >UniRef50_Q3IGR8 Sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IGR8_PSEHT Length = 533 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 122/530 (23%), Positives = 227/530 (42%), Gaps = 54/530 (10%) Query: 2 KTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWP 61 K + +L+ + F IF+A W +S +L P+ + + P G+++ L P YW Sbjct: 19 KQVTKQLLVGLVYFVIFAAT---FW-LSKNLETVPESSAIFIPAGIKIAFFLLLPTKYWL 74 Query: 62 VLLGAEWLLIYWLT------QAVGLTHFPLLMIGSLLTLLPVALI----SRYRHQRDWRT 111 L LL ++ A+ F L + SR+ + Sbjct: 75 TLWVTSRLLAAFVGAFNNEVLALAQWDFNLFHGFWQELCFVALIYILKNSRWPPSINDSQ 134 Query: 112 LLLQGAALTAAALLQSLPWLWHGKESWNAL-------------LLTLTGGLTLAPICLVF 158 +L L A+ E N L L +TG L + P+ ++ Sbjct: 135 GILSLILLAVASTSIKWFVFASAFEFTNILVATELLQYQLNMCLGDITGTLLVTPLMMLI 194 Query: 159 WHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP 218 + +++ + + HL LL ++ + L + LP Sbjct: 195 FSVRHK----------LNKSLLLKMMHLGAALLCLLLIVIFVYALRPDTYPLLRLASLLP 244 Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHP---VDLLLSLLVQSLTGLLLGAGIQR 275 II ++ +G GA+ + + +I ++ P L +L ++T ++LGA I Sbjct: 245 IIWFSYRFGSLGAVTSATLINSLIILEASFTHAPENTYISQLFILANAITSMVLGAAITE 304 Query: 276 LRELNQSLQKELARNQ-------HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L+ N L K + HLA +++ +E+ R+ +++ELHD++GQ +TA++T Sbjct: 305 LKRKNNELYKTNLELRKQLTKNTHLAAKMVSVQENERKHLSQELHDELGQNLTALKTDLS 364 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR--SLMREM 386 I+ ++ + + ++ + +YD+V +L+ LRPR+LD+L L +AI L + Sbjct: 365 ILSHMSNKDTQ--SFVKSLKTNANTMYDSVYQLMHYLRPRELDELGLNKAITAGRLKSLL 422 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 + + ALS++ + ++R+CQE + N VKH++AS + ++ + + Sbjct: 423 HKAKINFQADFKIH---KALSKDHEIAIYRICQEAVTNCVKHSNASKMHIELVTDNNFIT 479 Query: 447 LVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLP 496 L I D+GS P + +GL + ER ALGGT + +G + V LP Sbjct: 480 LTISDNGSLATPANNSGNYGLAFIEERAMALGGTFEVCVKNGFTIKVKLP 529 >UniRef50_D2WA17 NirW n=1 Tax=Methylomonas sp. 16a RepID=D2WA17_9GAMM Length = 525 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 124/484 (25%), Positives = 191/484 (39%), Gaps = 37/484 (7%) Query: 39 AVLLFP-FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPV 97 L++P G+ L L++ R + PV+ +E L L L L + T Sbjct: 45 VSLVWPLSGVALSLVILGGRRWLPVIWFSELLGN-LLADLSQLLSIALAFSVVIETTSCH 103 Query: 98 ALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLV 157 L+ + D L+ AA + + S L G + PI ++ Sbjct: 104 WLLVKRGRFDDRLRRTQDFIDLSIAASIGTAIGGTSATVSILCL-----GQPSSLPILMI 158 Query: 158 FWHYLANN-----TWLPLGPSLVSQPINWRG-----RHLVWYLLLFVIS-----LWLQLG 202 F H+ + PL P W+G R L + L FV+ WL+ Sbjct: 159 FVHWWQGDVLGIILITPLILVWRDWPDYWQGQNRMARMLGLFALAFVVGQLTYLGWLEAL 218 Query: 203 LPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWR------DHPVDLL 256 D + F L I A A +G G L+ ++ A ++ D+ Sbjct: 219 FADHARAYWSF---LFITAAAVGFGRHGVLLIIVLTAGQVLFGHMRNVGTFRDSGLQDIW 275 Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 L++ ++ G+ L ++ L+ + L +R + E R +ARE+HD++ Sbjct: 276 FFLVILTIVGVALAINVEERIRREADLRVSQRTLKALMQRNEQVREEERHHIAREIHDEL 335 Query: 317 GQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLE 376 GQ +TAI+ A ++ R S + + QL G VR + LRP L L L Sbjct: 336 GQVLTAIKMHAALLTRTTPHAGSWRDDINHLLQLIDGGIKVVRNIALHLRPPILA-LGLV 394 Query: 377 QAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL 436 A++ L + E GIV L D S + E TLFR+ QE L NI +HA+A V + Sbjct: 395 PALQWLTDQF-AETHGIVCELATEGDTSGIQEPYLTTLFRLAQEALTNIARHAEAGKVWI 453 Query: 437 QGWQQDERLMLVIEDDGSGLPPGS---GQQGFGLTGMRERVTALGGTLHISC-LHGTRVS 492 + + ER+ LV+ D+G G GL GM RV L G I GT + Sbjct: 454 KLTAEPERISLVVADNGHGFDVDEELKTGNSLGLNGMLHRVEMLDGEFEIHSNAEGTILL 513 Query: 493 VSLP 496 LP Sbjct: 514 CHLP 517 >UniRef50_UPI0000E0F7AF sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=2 Tax=Proteobacteria RepID=UPI0000E0F7AF Length = 533 Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 109/524 (20%), Positives = 205/524 (39%), Gaps = 66/524 (12%) Query: 23 FCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGA---------------- 66 F ++ S D A+ FP G L L P +WP L A Sbjct: 27 FSFFTASFGYSVVTDFAIWYFPLGFHFILFLVLPFKFWPTALIALGIGAGLTMYNQGSIY 86 Query: 67 -EWLLIYWLTQAVGLTHFPLLMIGS-----LLTLLPVALISRYRHQRDWRTLLLQGAALT 120 +WL + LT + + P++ I L A+++ R + L+ Sbjct: 87 YDWLKHFLLTLTISIHTLPVVFIAQKMIQKLDIFSLKAIVTLVLFGMLSRLTNIGFHFLS 146 Query: 121 AAALLQSLP-------WLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPS 173 ++ +P +L H ++ +L+ ++ + F + ++ L + Sbjct: 147 NTSVYDKIPVNEKFGMFLQHNIAAYPGILMAIS---------VYFLYQWYRHSTLKFTRN 197 Query: 174 LVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALI 233 +++ I +LLF IS+ Q L LPII + Y W +++ Sbjct: 198 MLASTIRLAVALTTLIVLLFSISVTSQ--------NILQLVLILPIIWFGYRYRWVASIV 249 Query: 234 ATLMNAIALIASQ--TWRDHPVDLLLSLLVQSLTGLLLGAGI--------------QRLR 277 + L + L+ T + V ++ L GL+ +L+ Sbjct: 250 SALWINLVLLVLLYNTSPEQLVAFQPFIVCYFLIGLVTAGLQIDHNTIYESLQKHQTQLK 309 Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 L + + Q +A+ ++ +E +++V++ELHDD+GQ ITA+R ++++ Sbjct: 310 FKYHELSQTKQQLQSMAKEIIAVQEIEKKNVSQELHDDVGQNITALRLAITMLEKNEKLT 369 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 K S ++ ++ +Y L+ LRPR +DDL L + ++L I Sbjct: 370 VQDKHSVHELKIMTDEIYSNAYDLMYWLRPRMVDDLGLSATLTGHFFSLKLTQNNIEYSH 429 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + L++ ++ +FR+ QE +NN+++H+ A+ + + L D+G G Sbjct: 430 QVSTSVDQLNDTIKIAIFRIVQECVNNVIEHSQATQCHINLHLYASIIKLEFFDNGIGFN 489 Query: 458 P---GSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 +G GL + + AL G L +S G RV V LP Sbjct: 490 QNILDQPLRG-GLFNIHNNMLALNGKLSLSNEEGARVYVELPIE 532 >UniRef50_UPI0001AEBEC0 2-keto-4-pentenoate hydratase, putative n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBEC0 Length = 521 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 117/533 (21%), Positives = 211/533 (39%), Gaps = 68/533 (12%) Query: 9 ITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEW 68 +T + ++A + +W S P G+RL L P WP+LL AE Sbjct: 9 VTYLLMGLGYTALFHGVWLFSTQFEIISGTVSWYLPAGVRLAAFLLLPIYSWPLLLIAEK 68 Query: 69 LLIYWLTQAVGLTHFPLLMIGSL-----------LTLLPVALISRYRHQRDW-------- 109 + L G+ + G++ + + R R + Sbjct: 69 STHFILFHPGGILDNTAFLSGTIGWYLVHLVLSPAVICTCVYLFRRRFSAPYIDNVSSTL 128 Query: 110 ---RTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNT 166 +L AL A L + L G E + ++L + G + + L Sbjct: 129 ATLAFGVLISVALGAVFLGRRAIELQTGIEVFLSILFDFSLGDFVGIVVLC--------- 179 Query: 167 WLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRF--------TPFCLALP 218 P +L +P + HLV YL WL L + + F + P Sbjct: 180 --PFLFALYKRP-SIPKSHLVLYLTTIA---WLVLLMLSSYAYFQQINISYQVKYLAVFP 233 Query: 219 IIALAWHYGWQGALIATLMNAI-ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQR-- 275 + L++ Y G+ + L+ I A + + P++ +L + L+LGA I + Sbjct: 234 ALFLSYRYAIVGSAFSCLLIGITAFVVASQSALPPIEHQFYILASCTSCLILGASINQST 293 Query: 276 -----LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 L + N+ L+ + Q LA +L+ +E R+ ++R+LHDD G I ++ Q + Sbjct: 294 LLNMKLAKKNEDLEVSVQSAQALASQLVVVQEDERKRLSRDLHDDFGHRIVDLKLQLSLD 353 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 R + + ++ +Y A+++ LG LRP +D L +E I+ L+ Sbjct: 354 SRESDN--------DMMLNKIDALYHAMKKSLGGLRPSGIDTLPIESVIQRSEIITTLKR 405 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 I +Q++ ++R+ QE + N +K+A+A+++++ + ++ Sbjct: 406 ANINYSFNVSGTPVPFDSDQKIHIYRIVQEAVTNSIKYANATSLSIDINYAQHSAVFIVT 465 Query: 451 DDGSGLPP-----GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 DDG G+P + + GL MRER + G IS GTRV ++LP Sbjct: 466 DDGGGIPEHIAQLANAEPTLGLLSMRERAKLINGEFDISQNKPTGTRVCLTLP 518 >UniRef50_Q2LRG0 Signal transduction histidine kinase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRG0_SYNAS Length = 519 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 5/237 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 ++ I ++ + L++ + ++L+ L E R +ARE+HD++GQ++TA + Sbjct: 280 VVTYEDITERKKAEKELEESREKMRNLSIHLQSVREEERTRIAREIHDELGQSLTAFKMD 339 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 + + + + + L ++V R+ LRP LDDL L A+ +E Sbjct: 340 LSWLGKRMTSEKLLHDKIKAMSGLVDRTIESVHRISADLRPGLLDDLGLVAAMEWQAKEF 399 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 GI + ++ L + +FR+ QE L N+ +H++A+ V ++ + ++++ Sbjct: 400 SAR-SGIACEADLEAEDVPLDKEPATAVFRIFQETLTNVARHSNATKVFVRLETKGDKVI 458 Query: 447 LVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLH-ISCL-HGTRVSVSLPQRY 499 L + D+G G+ + FG+ GMRER GG + I GT V VS+P + Sbjct: 459 LEVTDNGRGITQKQINDPKSFGIMGMRERALLWGGDVQVIGSRSRGTTVKVSIPLKS 515 >UniRef50_B0K3K4 Histidine kinase n=11 Tax=Thermoanaerobacterales RepID=B0K3K4_THEPX Length = 388 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 5/243 (2%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + S + L + L+++N L++ + + L+ +++E +E R+ +ARE+HD Q + Sbjct: 140 LVSQINVALNYLNRDLKKMNTQLEQLKDK-RALSVKIIEAQEEERKRIAREIHDGPAQAM 198 Query: 321 TAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + +++ + ++L D K + ++ + VR+++ LRP LDDL L A+ Sbjct: 199 ANVLSKSELCEKLITKDIEQAKIELKNLKNIVQQSLKEVRKIIYDLRPSALDDLGLIPAL 258 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 ++ E GI D LS +T FRV QE L NI KH+ A +++ Sbjct: 259 SRYIKNFSEE-TGIFVDFSVLSDYKRLSPEIEITCFRVVQEALTNIKKHSKAKNASVKFE 317 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 + ++I+DDG G + QG+GL GMRER+ L G IS +GT++ +S+P Sbjct: 318 FGMRFISIIIKDDGIGFDKENIGQGYGLMGMRERIEILNGKFEISSFKNNGTQIYISIPV 377 Query: 498 RYV 500 R V Sbjct: 378 RGV 380 >UniRef50_C0A2M0 Signal transduction histidine kinase-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2M0_9BACT Length = 534 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 99/509 (19%), Positives = 171/509 (33%), Gaps = 37/509 (7%) Query: 11 VIACFFIFSAAWFCLWSISLHLVER-PDMAVLLFP-FGLRLGLMLQCPRGYWPVLLGAEW 68 +++ F+ W ++ P A++ +P G + L+L P + Sbjct: 23 LVSLAVTFACVWLSIYVSRNAFTGGGPSWAIVFWPETGCSIALLLIYGLRQCPAIYLGHV 82 Query: 69 LLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSL 128 L + + L P + I S L + A I R +L + + Sbjct: 83 LALI-CFYPLSLH--PAIGIESTLHAMLSAWIIRRIFPG---WTILPNVRFDIVLVGLAG 136 Query: 129 PWLWHGKESWNALLLTLTGGLTLAPICLVFWH----YLANNT-----WLPLGPSLVSQPI 179 + +N + P FW + T + PL L + Sbjct: 137 ALVSLPFALFNCWKWG-----AVLPATDHFWQKVLIWWLGETTSVVAFTPLILMLFMPEV 191 Query: 180 NWRGRHLVWYLLLFVISLW-----LQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIA 234 R + YL I L E + + + G +I+ Sbjct: 192 RSERRRPLEYLFYIAILLTGACLACISTRQGETPAPGALLMVTACVLIGLRNGTAAGVIS 251 Query: 235 TLMNAIALIASQTWRDHPVDLLLSL-LVQSLTGLLLGAGIQRL--RELNQSLQKELARNQ 291 + + + + D +L+ V LLL + L N S ++ + Sbjct: 252 NCLFYVIIGLAYILCAPIEDAVLTTNQVIFGHCLLLNLMVTTLLVASGNFSHRRAERELR 311 Query: 292 HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLS 351 ++ R+L +E+ RR ++R+LHD + QT+ AI Q ++ +A K I L Sbjct: 312 GVSTRVLNAQEAERRRLSRDLHDSVCQTMQAIVLQMKLLGHTSAPLDFEKHIQPRITDL- 370 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 +R+ + LRP LD +R + + + L R Sbjct: 371 DKAVAELRQNIDGLRPELLDRSNFADVVREYATAFARRHH-VEVTVYACDELPTLPVPNR 429 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQ-DERLMLVIEDDGSGLPPGS----GQQGFG 466 LFRV QE L N V H A V + + +L + D+G G S + +G Sbjct: 430 EHLFRVLQESLANAVNHGGARHVQVSLHRDAASAFVLSVRDNGCGFDETSRQRTSRPRYG 489 Query: 467 LTGMRERVTALGGTLHISCLHGTRVSVSL 495 L M+ER +GG L I G ++L Sbjct: 490 LRTMQERAFLMGGELAIESTPGAGTHITL 518 >UniRef50_A3DEX1 Histidine kinase n=5 Tax=Clostridium RepID=A3DEX1_CLOTH Length = 392 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 12/247 (4%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + S G+ L L ++ ++ + + + L R+++ +E R+ VARE+HD Q++ Sbjct: 139 LISQIGISLSYLTGDLENVSLQIED-MKQRRLLGIRIIKAQEEERQRVAREIHDGPAQSM 197 Query: 321 TAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + I +A I +RL +D K + ++ + VR+++ LRP LDDL L + Sbjct: 198 SNIVLKAEICERLVDSDPEKAKDELRTLKSVVRDTLRDVRKIIYDLRPMSLDDLGLIPTL 257 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 + + E GI + R L +T+FR+ QE +NNI KHA A VT+ Sbjct: 258 QRYIETCREE-SGIKITFKTRGTCEQLKPVVSLTVFRLVQEAVNNIKKHARADKVTINLE 316 Query: 440 QQDERLMLVIEDDGSGLP-------PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTR 490 ++ L L I D+G G +GFGL MRERV L G I GTR Sbjct: 317 FLEKELKLYIADNGVGFDFDSLKSNEEDINKGFGLISMRERVELLDGKFEIDSAVGKGTR 376 Query: 491 VSVSLPQ 497 +++++P Sbjct: 377 LNITVPL 383 >UniRef50_B2VGC1 HrpX protein (Hrp cluster) n=6 Tax=Enterobacteriaceae RepID=B2VGC1_ERWT9 Length = 494 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 5/240 (2%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 ++ + +G I + + L+ R + LA + + E R+ +ARE+HD++GQ +T Sbjct: 245 VLISVMCVGRDITAIHYAEKKLEDSHMRLRLLARQREVSREEERKRIAREIHDELGQHLT 304 Query: 322 AIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 ++R +++ + + DN + + + L+ VR + RLRP LD + L A+ Sbjct: 305 SLRMGISMLRIQFSKDNPLLHERVVHLMGLTDKTIQVVRNVATRLRPNVLD-MGLTPALE 363 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 L E G L E L + Q FRV QE L NI +HA AS V + + Sbjct: 364 WLRDEFISRHIGCCCRLITPEKEVRLGDEQATAAFRVAQESLTNISRHAQASEVIILLVR 423 Query: 441 QDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 ++L + D+G G +G+ FGL MRER LGG + I GT +S+++P Sbjct: 424 HAGSVVLTVRDNGRGFDCQNGKDNAFGLMSMRERGRMLGGRVDIESKPSIGTCISLTIPI 483 >UniRef50_Q1H355 Sensor protein n=3 Tax=Methylophilaceae RepID=Q1H355_METFK Length = 466 Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 9/292 (3%) Query: 211 TPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLG 270 +A+ +A+ W ++++ ++ R + L + L G+ Sbjct: 175 LLLLVAIFFVAVNALVYWAVGRAMRPVDSVMTALNELERGNLKARLPDFELPELAGIS-- 232 Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 ++ + ++L+ + N L ++L+ +E R+++AR+LHD+IGQ +TA+ A + Sbjct: 233 ---RKFNAMAETLETSIQNNHKLTQQLIRLQEDERKNLARDLHDEIGQYLTAVHVDASAI 289 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 A + K+S + I ++ + D V +L RLRP LD L A++ L+ + Sbjct: 290 LN-AKSIENAKESAKAISAVARQMMDIVHDMLQRLRPSGLDAFGLSTALKDLVSTWKQRN 348 Query: 391 RGIVSHLEWRIDESAL-SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 + + H++ + E + ++R+ QE L N+ +H++AS V ++ + L + + Sbjct: 349 QQVDVHVDIPGRLDDIRDETTAIAVYRIVQECLTNVTRHSNASRVDIRITIEKTMLNITV 408 Query: 450 EDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQRY 499 ED+G G GFGL GMRERV LGG + GTRV+V LP + Sbjct: 409 EDNGRGFNTAQLPSGFGLAGMRERVEGLGGRFSLDSALAAGTRVNVELPLQA 460 >UniRef50_Q47FQ9 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FQ9_DECAR Length = 373 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 135/286 (47%), Gaps = 6/286 (2%) Query: 217 LPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLS----LLVQSLTGLLLGAG 272 +P+I L+ + + + A+ IA + + + + +Q + Sbjct: 83 IPVIFLSALRETEDKVRGFSLGAVDYIAKPFQPEEVLARVRTHIELRRLQCRLEERVAER 142 Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR 332 ++LR+ + L+ R Q LA L E R +ARELHD++GQ +TA+R + R Sbjct: 143 TEQLRQSSDELRASRERLQELAAFLQSVREEERTAIARELHDELGQALTALRIDLAWINR 202 Query: 333 LAAD-NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 V+ + DAVRR+ LRP LD L L AI L+ + Sbjct: 203 QCKTLGPEVQARADASCAIVERTIDAVRRISEGLRPGMLDVLGLTAAIEYLVEQFAKRN- 261 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 I +L DE A+ + + +FR+ QE L N+V+HA A+ V + Q + + + I D Sbjct: 262 DIPCYLTSDRDEFAIDDRVSIAVFRLIQEALTNVVRHASATRVDITLSQDNNTICVDIRD 321 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQ 497 +G GL G +QGFGL GMRERVT LGGT+ I GTR+ P Sbjct: 322 NGIGLATGEPKQGFGLLGMRERVTMLGGTIDIDGSRGTRILARFPL 367 >UniRef50_C0N6H6 Histidine kinase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H6_9GAMM Length = 424 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 14/282 (4%) Query: 231 ALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLL-----------LGAGIQRLREL 279 ++ L + L + P+D + L S TG L + + + Sbjct: 141 IVMFFLAVNVLLYFAVARSLKPIDTITEALSDSETGQLDRRLPIFDLPEMANISHKFNLM 200 Query: 280 NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS 339 +LQ + N L ++++ +E+ R+ +A +LHD+IGQ +TAI A + + + + Sbjct: 201 ASTLQGSINNNHRLTQQIIRLQEAERKKLAHDLHDEIGQHLTAIHVDASAI-KTSPNLDI 259 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 K+S + I+++ + + VR +L +LRP LD+L A++ L+ + I ++ Sbjct: 260 AKKSAEAIDEVVRRMMEIVRTMLHQLRPDGLDELGFVVALQELVNNWRERHQNIDVEADF 319 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG 459 D + E ++TL+RV QE L NI +H+ A V + + ++ + L I D+G G Sbjct: 320 NGDFQRIDETVQLTLYRVMQECLTNISRHSRARQVWVSLTENEQAIKLEIADNGQGFDLQ 379 Query: 460 SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 FGL GM+ERV ++ G I G + VS+P++ Sbjct: 380 QHSYRFGLAGMKERVDSVHGEFVIKTALNEGVTIDVSIPKQG 421 >UniRef50_B8D0J3 Histidine kinase n=2 Tax=Clostridia RepID=B8D0J3_HALOH Length = 391 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 6/242 (2%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + S G++ + L L++ + Q LA ++++ +E R+ VARE+HD Q+I Sbjct: 138 MVSRVGVVHDYLLGELSNLSEQFDDLRQK-QQLAIKIIQAQEDERKRVAREIHDGPAQSI 196 Query: 321 TAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + + + Q+L D + + +++L VR+++ LRP LDDL L + Sbjct: 197 ANLVFRVELAQKLMDKDLKKARNELEDVKELVRLSMQEVRKIIYDLRPMSLDDLGLIPTL 256 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 R + + + I+ + L +T+FR+ QEGLNNI KH+ AS T+ Sbjct: 257 RRYINKFNEQ-TKIIIDFNILGPKRRLPNTYEITIFRLIQEGLNNIYKHSKASTGTVTLE 315 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 E++ ++I DDG G P FGL MRER LGG L + GT++ ++LP Sbjct: 316 YTPEQINILISDDGIGFKPEEVGANKFGLVSMRERCELLGGKLDLFSEKNKGTKIKITLP 375 Query: 497 QR 498 + Sbjct: 376 IK 377 >UniRef50_Q0KDJ4 Signal transduction histidine kinase containing PAS/PAC sensor domain n=3 Tax=Burkholderiales RepID=Q0KDJ4_RALEH Length = 355 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 8/241 (3%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 + + + I + Q L + A+ + L+ L E+ R ++RELHD++GQ++T Sbjct: 106 AVVGTVGISRDITDRKRSEQELLESRAQLRELSAYLQSVREAERTRISRELHDELGQSLT 165 Query: 322 AIRTQAGIVQRL--AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 A+R ++ + ++ Q+++Q++ DAV+R+ LRP LD+L L AI Sbjct: 166 ALRLGLSFIEAQQGPDAGDACRKHLQMLKQIADSTVDAVQRIAADLRPPLLDELGLTAAI 225 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 L G GI L + LS +FR+ QE L N +H A V ++ Sbjct: 226 EWLAESFSERG-GIACELALQ-PVGELSAELSTAVFRIAQEALTNACRHGRADRVRVELS 283 Query: 440 QQDERLMLVIEDDGSGLPPGSG--QQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSL 495 L LV+ D+G G+ ++ GL GMRER LGG L ++ GTRV + Sbjct: 284 AAGGTLRLVVADNGRGIDASRAGHRRSLGLLGMRERALMLGGKLAVTSEKGGGTRVEAQI 343 Query: 496 P 496 P Sbjct: 344 P 344 >UniRef50_B9XSJ3 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSJ3_9BACT Length = 795 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 11/262 (4%) Query: 248 WRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRD 307 +R + SL S G+ I ++ L K + LA L E R+ Sbjct: 511 FRIPVLIGAASLGEGSNEGVCFVVDITERKQAEVELTKSREELRALAAHLQFIREEERKH 570 Query: 308 VARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQS-----GQLIEQLSLGVYDAVRRL 361 + RE+HD++GQ++T + ++ RL +++ + + + +L + VRRL Sbjct: 571 ITREIHDELGQSLTGFKMDLAWMRARLLGEDSKASRQQLIDKIENMARLIDETANVVRRL 630 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 LRP LDDL L AI +RE + GI E + + + LFR+ QE Sbjct: 631 CTELRPGVLDDLGLTAAIEWQIREYQNR-TGIRCSTEIESGDLGVDAERSTALFRIFQEL 689 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGG 479 + N +HA AS V + + ++L + D+G G+ +G + GL GMRER LGG Sbjct: 690 MTNTARHAQASRVEVSLKRIGSEIVLEVRDNGRGIKENEKAGTKSLGLVGMRERALVLGG 749 Query: 480 TLHIS--CLHGTRVSVSLPQRY 499 L I+ GT V V +P Sbjct: 750 ELEIAGKPGRGTMVRVRVPLAG 771 >UniRef50_B6JD37 Signal transduction histidine kinase containing PAS/PAC sensor domain n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD37_OLICO Length = 358 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 6/240 (2%) Query: 264 LTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAI 323 + + + I + L + + L+ L E R +ARELHD++GQT+TA+ Sbjct: 110 IGTVGISRDISERKAAEDELVASRTQLRALSHYLQTVREEERAHIARELHDELGQTLTAM 169 Query: 324 RTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 + ++ RL+ADN ++K + + L+ ++R+ LRP LD+L L A+ L Sbjct: 170 KMDLVWLRERLSADNGALKPRVERLVGLADRSVTDLQRIASDLRPLMLDELGLVSAVHWL 229 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 + + + +L + ++ FR+ QE L NIV+H+ A VT+ + Sbjct: 230 TDTVAGQ-SNLNINLSFDREDLTYGPEVSTAAFRIVQEALTNIVRHSGARHVTITACHAE 288 Query: 443 ERLMLVIEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 + L + I DDG GLPP S + GL GM ER LGG++ + GTRV SLP + Sbjct: 289 DELHIEIVDDGCGLPPTAASPRLHHGLLGMHERANMLGGSVAVESAPGGGTRVRASLPLK 348 >UniRef50_C5AIA0 Multi-sensor signal transduction histidine kinase n=24 Tax=Burkholderia RepID=C5AIA0_BURGB Length = 769 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 130/320 (40%), Gaps = 17/320 (5%) Query: 194 VISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPV 253 V + + L+RF P + +G G L + L + D Sbjct: 442 VFGVSAMDAIGAPLTRFIPQRFRHAHASHIARFGVTGQSERHLGSQRLLYGLRANGDEFP 501 Query: 254 DLLLSLLVQSLTG---LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAR 310 + G ++ + + +L+ + L+ L E + +AR Sbjct: 502 IEASISQIHDGDGKLYTVMMRDVTERVQAENALKASREELRELSANLQRVREEEKTRIAR 561 Query: 311 ELHDDIGQTITAIRTQAGIVQRLA------ADNASVKQSGQLIEQLSLGVYDAVRRLLGR 364 ELHDD+GQ +TA++ V+ +ASV + + + +L +VRR+ Sbjct: 562 ELHDDLGQQLTALKMDLSAVEHRLLRDGTGEAHASVVEPLREMRRLIDATVASVRRIAAD 621 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 LRP LDDL L AI L + GI + LFR+ QE L N Sbjct: 622 LRPVMLDDLGLVPAIEWLANDFTNR-YGIEVERRIDPGDVRFPNATATALFRIVQEALTN 680 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ-----GFGLTGMRERVTALGG 479 + +HA+AS V L +D + +L I DDG G G++ FGL G+RER LGG Sbjct: 681 VARHAEASHVALTLGIEDRQCVLRIVDDGVGADQADGRRAPDDKSFGLLGIRERAHMLGG 740 Query: 480 TLHISCL--HGTRVSVSLPQ 497 T+ + G +++++P Sbjct: 741 TVRMETARNQGYALTITIPL 760 >UniRef50_UPI0000E0F7D9 sensory histidine kinase in two-component regulatory system with UhpA, regulates uhpT expression n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F7D9 Length = 542 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 91/476 (19%), Positives = 187/476 (39%), Gaps = 31/476 (6%) Query: 52 MLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLP---VALISRYRHQRD 108 + P+ +W ++ L + Q V L + ++ L + ++ Sbjct: 68 FILYPKTHWRLIAFPFLLFHFIANQPVINNFLHSLYLSIFTLIIIIFLAHLTHKLLRGKE 127 Query: 109 WRTLLLQGAALTAAALLQ-SLPWLWHGKESWNALLLTLT---GGLTLAPICLVFWHYLAN 164 +L + LL S ++ + ++ ++ + + Sbjct: 128 SFSLPFIHVVVGFGVLLSLSYQLVYIATVMNPPIFAAISNQWAFFSMGQLVGFIISFSIL 187 Query: 165 NTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAW 224 L + + + + L++ I L L EL + L +P++ + Sbjct: 188 MMIL-MSQNQYAYGMKLLTIESYISLIMITILTILTLFYGGELVHYLSIYLVIPVVWFCY 246 Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPV---------DLLLSLLVQSLTGLLLGAGIQR 275 Y W G T++ I H DL+ LL +L L + A + Sbjct: 247 RYRWWGMSSFTIVINFFTIMFAISNSHFFNIDTNISYDDLIWFLLALNLFSLYINAMVFE 306 Query: 276 LREL--------------NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 L E+ N L + + + L L+ +E R+ ++R+L +G+ I Sbjct: 307 LDEIKRVNRKNQVLMTARNADLIEVNTQIKELNRHLISAQEKQRQQLSRQLEKLMGENIN 366 Query: 322 AIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 A++ +++ A+ + I++ + +Y +V L+ LRP L+ L L + S Sbjct: 367 ALQQSITVLEMRASFSQKENNPYYAIKKFTNIIYLSVYELVNWLRPETLERLGLINTLNS 426 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 + + L I E + + +++ + LFRV QE ++N +KH+ A+ T++ Sbjct: 427 KLFKDALALNNIRYEFELIGEHAEIADEIALPLFRVIQESVSNAIKHSKANTFTVKCQFN 486 Query: 442 DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQ 497 D L L IEDDG+G + ++GFGL+ M+ R+ A+ G ++ +G + ++ P Sbjct: 487 DSHLQLWIEDDGNGFDSDNVKRGFGLSSMKSRIEAINGEFSMTSTNGVSIYINTPL 542 >UniRef50_Q47G83 PAS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47G83_DECAR Length = 683 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 5/281 (1%) Query: 224 WHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSL 283 WQ L+ ++L+ + L + + + + + L Sbjct: 401 LREAWQSPSDLALLGIVSLVRDDQDIPVELSLSSTTVRGERLVTAIFRDLSERQRTELEL 460 Query: 284 QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQ 342 K + Q L L E R ++RELHD++GQ +T +R + + RL ++Q Sbjct: 461 LKSNRQLQELTASLESVREQERLRISRELHDELGQALTGLRMEISWLGGRLLTTQPELEQ 520 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 I++L G +VRR+ LRP LDDL A + + + LE D Sbjct: 521 KVVSIKKLIDGTIKSVRRISSELRPLVLDDLGFAAAANWYVDQFATR-TNLKVTLELPND 579 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 + TLFRV QE L N+ +HA A V ++ Q +++ L I DDG G S + Sbjct: 580 DPENGGTVATTLFRVLQESLTNVARHAGARNVDIRLLQANDQWRLEIRDDGQGFDQSSAK 639 Query: 463 -QGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQRYV 500 G GL GMRERV ALGG+ ++ GT + + +P Sbjct: 640 MGGIGLIGMRERVQALGGSFELTAAPGQGTLIEICIPVESA 680 >UniRef50_A0LKW7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKW7_SYNFM Length = 535 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 10/236 (4%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 I + +L + + ++L+ +LL E R+ +ARELHD GQ++ A++ Sbjct: 281 RDITDRKRARDALLESERQLRNLSAQLLRAHEEERKRIARELHDSTGQSLAALKFYVDNA 340 Query: 331 QRLAAD--NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 + + + L + RR+ LRP LDDL + I+ RE++ Sbjct: 341 LNMKERGKPDEMANCLDRMVPLIRNAIEEARRIYMGLRPSILDDLGIIATIQWYCREVQK 400 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + E + E+ ++ +FR+ QE LNNI+K+ A VT+ + L+ Sbjct: 401 TCPKTNILERIDVQEDKIPEDIKIVIFRLVQESLNNIIKYGKAERVTISLVSTSSAIELI 460 Query: 449 IEDDGSGLPPGS------GQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 ++D+G G + +G GL GMRER+ GGT I GT + P Sbjct: 461 VQDNGVGFDLDAYLHTENRNRGLGLAGMRERMELSGGTFSIQSIIGEGTTIRAVWP 516 >UniRef50_B2T8J5 Multi-sensor signal transduction histidine kinase n=10 Tax=Burkholderia RepID=B2T8J5_BURPP Length = 553 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 6/230 (2%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 I + + Q L + + + L+ + E R+ +A E+HD++GQ +TA++ +++ Sbjct: 314 DITSRKRIEQELFESRNQLRELSAYMEAIREEERKRIAMEIHDELGQLLTALKMDVSLLK 373 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 + + + +L V + LRP L + + A+ L+ + + Sbjct: 374 MRLGKDPDAMRKADDMRELVEKTIWMVCNVANHLRPVAL-NFGVVSALEWLVEDF-IRRH 431 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 GI L E L E +FR+ Q L N+ +HA A+ + L L + D Sbjct: 432 GIPCQLHINGGEPVLPEACATAVFRIVQASLTNVGRHAHATRADVTLTSTAAALDLHVSD 491 Query: 452 DGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 DG G PG + G +GL GM+ER +GG + I GT +S+ +P Sbjct: 492 DGCGFDPGMARTGYSYGLLGMQERARLIGGAMTIDSAQGMGTAISIHIPL 541 >UniRef50_A8VTE1 Short-chain dehydrogenase/reductase SDR n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE1_9BACI Length = 633 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 11/232 (4%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 EL ++K+ Q L E++L +E R+ +ARELHD G +++I +++ A Sbjct: 388 ENNELTHEIKKKEEIRQMLLEKILTVQEDERKRIARELHDQTGHALSSILLGLKMLED-A 446 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 V + + + +L+ + + L +LRP LD L+ AI +++ + + I Sbjct: 447 KTPEEVTKQIEALRKLTHQSIEDIHDLAWQLRPTILDKFGLKTAIERYIQDFQQKL-DID 505 Query: 395 SHLEWRI-DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 + + D L+ +FR+ QE L NI K+A+A++V++ + + + ++IEDDG Sbjct: 506 YDVLIKGIDTIRLTPEMETAIFRIVQESLTNIFKYAEANSVSVILLRNHDMISVIIEDDG 565 Query: 454 SGLPP------GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G + GL GM+ER + LGGT I GT + V LP Sbjct: 566 VGFDVEKMMNKDPSKFNLGLHGMQERTSLLGGTFEIESEKGRGTAIMVKLPM 617 >UniRef50_Q1H352 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H352_METFK Length = 466 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 118/231 (51%), Gaps = 7/231 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 A I + L L NQ LA ++ +E RR++ARE+HD++GQ +TAIR + + Sbjct: 227 ADITEQHLAERELAVLLKENQALARHAMQVQEEERRNIAREIHDEMGQYLTAIRLELASL 286 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + ++ + + I + AVR L+ RLRP LD L +AI L+ E + + Sbjct: 287 PK--EGHSFIGEFSARINSHVEHIQQAVRGLIHRLRPTALDAHGLAEAIEQLVNEWKRQH 344 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD----ERLM 446 I L +L E + +R+ QE L NI +HA A+ V ++ + + L Sbjct: 345 PAIECQLMLDKHYPSLPEKTSIVAYRIVQESLTNIARHAYANRVAIRLIRTHGILSDILT 404 Query: 447 LVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC-LHGTRVSVSLP 496 + ++DDG G P + GFGL+GMRERV A GGT +I G +S +LP Sbjct: 405 VEVQDDGVGFNPHLPRAGFGLSGMRERVEAEGGTFNIRSERKGVVISATLP 455 >UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G173_DESHD Length = 482 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 16/312 (5%) Query: 196 SLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDL 255 L + + L F ++ + A + +L S D DL Sbjct: 176 LLLITTVIISLLGIFGAILIS--HLVTKPIRDLAAASQGISLGDYSLRVSIYGTDEIADL 233 Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 + + L + Q L + LQ + Q L ++++ +E R+ ++RELHD+ Sbjct: 234 GHNF---NAMALSIQNYAQEREALVEELQAKETVRQELLKKVISAQEDERKRISRELHDE 290 Query: 316 IGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 Q++T++ + L ++ +++L+ V R+ LRP LDD+ L Sbjct: 291 ASQSLTSLILGLKYLSEL-EEHEKSPAMASELKELASSTLKEVHRIAVELRPTVLDDMGL 349 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRID-ESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 AI ++ + + R + + S L +TL+R+ QE L N+ K+A+A Sbjct: 350 VPAIERFVKFFKRQYR-LDVDFHAQNRIASRLPNEIEITLYRIVQEALTNVAKYAEARNA 408 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISCLH- 487 ++ + + + L+IEDDG G + G+ GM+ER + LGG I Sbjct: 409 SIVLEIKPDYVNLIIEDDGKGFDVDQVLKSSASDSHLGIAGMQERTSLLGGEFTIESSPD 468 Query: 488 -GTRVSVSLPQR 498 GT V V +P Sbjct: 469 QGTAVYVRIPME 480 >UniRef50_C5V7S2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7S2_9PROT Length = 647 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 15/276 (5%) Query: 226 YGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQK 285 + W+G +++ + T R + + + + + + L Sbjct: 380 WNWEGRVLSADNGIKWINLRATPRMLAGGGCIW--------DGVAVNVTESKGIEEKLLH 431 Query: 286 ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSG 344 + L+ L E R +ARE+HD++GQ +TA+R +V+ N + Sbjct: 432 SQQMLRELSAHLENIREDEHRHIAREIHDELGQALTALRMDVSLVRLNFGEANPQLLTHL 491 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 Q + Q D VR + LRP LD + + A+ L E I L Sbjct: 492 QSMSQRVQRTVDIVRHITSSLRPGALD-MGIVAALEWLAEEFTG-YTQIQCELALNDGNI 549 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-- 462 AL E +FR+ QE L NI +HA A+ V + + ++ L + D+G+G PG+ + Sbjct: 550 ALDEFSATAVFRIVQESLTNIARHAQATQVEVIVTRSEDELCFEVCDNGTGFDPGAIENC 609 Query: 463 QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + FGL G+RERV L G I GT + V +P Sbjct: 610 KSFGLIGIRERVAMLSGHFEIESRQGAGTCLRVHIP 645 >UniRef50_B2TAX2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TAX2_BURPP Length = 748 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 6/235 (2%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 L + I E+ L++ A Q L E R+ +ARE+HD++GQ +TA+R Sbjct: 511 ALTIWTDITERMEVELRLRESYALLQELTSLRETAREEERKRIAREMHDELGQQLTALRL 570 Query: 326 QAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 ++ A D+ ++ + + L+ VR ++ LRP +D + A+ L Sbjct: 571 GVSAMRIEFAQDDPALAGRFRDLLALADDTMQVVRNVVASLRPAAID-AGIVAALEWLAA 629 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E +GR + HL D L E + + LFR+ QE L N+ +HA A+ VT+ Q Sbjct: 630 EFSRDGR-VACHLRIPDDNLVLDEARAIALFRIVQEALTNVARHAAATQVTISLEQTGRC 688 Query: 445 LMLVIEDDGSGLP-PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 +L I DDG G + + FGL GMRERV LGG + + GT ++V +P Sbjct: 689 WVLEISDDGCGFDSMAARMKSFGLVGMRERVLMLGGEISVCSAPGSGTSITVCIP 743 >UniRef50_D1CE67 Multi-sensor signal transduction histidine kinase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CE67_THET1 Length = 748 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 20/247 (8%) Query: 270 GAGIQRLRELNQSLQKE----------LARNQHLAERLLETEESVRRDVARELHDDIGQT 319 I + + + + + + A ++ +E RR +AR+LHDD Q Sbjct: 498 ARDITEKKRMEREIARRQRQLRRSQKREEQLSGYAAAVIAAQEEERRRIARDLHDDTAQA 557 Query: 320 ITAIRTQAGIVQRLAAD-NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQA 378 + A+ + ++ D + ++ + ++ L+ +VRR LRP LDDL L A Sbjct: 558 LIALSRRIDSLREDLGDLPEAAQRKIEDLKALTDQTLASVRRFSRDLRPSILDDLGLVPA 617 Query: 379 IRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 + L+ E + I + L+ + +E L + LFR+ QE LNN KH+ A+ ++ Sbjct: 618 LEWLVSE-NAKRYKITTRLKIQGEERRLQPEVELALFRIAQEALNNTAKHSQATGAAVEL 676 Query: 439 WQQDERLMLVIEDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISCLH--GTR 490 D L + D+G G + + G+ GM ER LGG L++ GTR Sbjct: 677 TFGDTWCRLTVSDNGIGFQTPPNISELADRGRMGVMGMYERANLLGGNLYVRTAPGQGTR 736 Query: 491 VSVSLPQ 497 ++V++P Sbjct: 737 ITVTVPL 743 >UniRef50_B8G136 Sensor protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8G136_DESHD Length = 497 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 130/313 (41%), Gaps = 11/313 (3%) Query: 193 FVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHP 252 V +W + +S + L AL + + + Sbjct: 172 VVTMVWSFVATALFVSALGITAAVILTKVLTRPVRELVALTQKVARGNLTVQGTVRAEDE 231 Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAREL 312 + +L Q + L + L L++ L E+++ +E R+ ++REL Sbjct: 232 IGVLTQAFNQMINS--LSETNRERENLLAKLKENEGMRIQLLEKVMIAQEEERKRISREL 289 Query: 313 HDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD 372 HD+ Q +T++ I++ +SV + Q + Q+ D V + LRP LDD Sbjct: 290 HDETSQALTSLMVGLKILE-AETSISSVGEKAQEMRQVVSQTLDEVHHMARELRPSVLDD 348 Query: 373 LTLEQAIRSLMREMELEGRGIVSHLEWRI-DESALSENQRVTLFRVCQEGLNNIVKHADA 431 + L A+ +R+ + + G + L+ + V +R+ QE L N+ K+A A Sbjct: 349 MGLIPALGRYIRDYQ-QKYGTEVDFHASGFEGQRLTASAEVAFYRIIQEALTNVAKYAQA 407 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISC-- 485 +V++ ++ + ++EDDG G + G GL GMRER LGG+++I Sbjct: 408 DSVSVVLDWREHWVTAIVEDDGVGFDTENVTNEPSHGLGLFGMRERAALLGGSVNIESKL 467 Query: 486 LHGTRVSVSLPQR 498 GT V + +P + Sbjct: 468 GTGTTVFIKIPIQ 480 >UniRef50_A5FQK5 Multi-sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FQK5_DEHSB Length = 1229 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 7/222 (3%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 + L++RL+E +E R +ARELHD +GQ++T ++ + + Sbjct: 1001 ERKAAEYELHTLSQRLVELQEEERATIARELHDQVGQSLTVLKLMLDKAKDSL--PDRSE 1058 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 + + L + +VR + LRPR LDDL L A+ + GI + + Sbjct: 1059 KLLAEAQPLVSELISSVRNMSLDLRPRMLDDLGLLPALLWYFDRFSSQ-TGINVNFQHAG 1117 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG 461 + S ++R+ QE L N+V++A V ++ +L LVI+D G G P Sbjct: 1118 LKRKFSPQLGTAVYRIIQEALTNVVRYAGVDHVLVRARADKNQLALVIQDSGKGFNPAQR 1177 Query: 462 QQGF--GLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRY 499 G GL GM+ERV LGG L I GT + V LP Sbjct: 1178 ATGMSSGLKGMKERVRFLGGKLDIESKPGEGTHIIVELPLNE 1219 >UniRef50_B9XSI9 Multi-sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XSI9_9BACT Length = 656 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 105/239 (43%), Gaps = 10/239 (4%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L + L++ + Q L+ RLLE +ES RR +ARELHD+IGQ +TA++ Sbjct: 406 LGTAQDVTEREMDEAELKRTTEQLQTLSRRLLELQESERRHIARELHDEIGQGLTALKIN 465 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 VQR+A A + I + VR L LRP LDDL L A+R + Sbjct: 466 LQAVQRMANSTAFSPRLLDSI-GIVDKTLRQVRNLSLDLRPSMLDDLGLFAALRWYADQ- 523 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 + + G+ E FRV QE L NIV+HA+A VT+ ++ L Sbjct: 524 QAQRAGLRIQFAAEPMEMRQDPALETACFRVAQEALTNIVRHAEAQNVTIDLNVAEKDLQ 583 Query: 447 LVIEDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 L I DDG G + GL GM ER + +GG + GT V P Sbjct: 584 LTIRDDGIGFDMKKVREHVAAGSSLGLLGMEERASLMGGRVEFKSTPGEGTEVYAWFPI 642 >UniRef50_B4D6U9 Multi-sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6U9_9BACT Length = 638 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 11/242 (4%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I + + L+ A+ + L RL E R ++RE+HD + Q +T ++ Sbjct: 395 IARDITEQKRALEQLRNSHAQLRELTGRLHAAREEERGRISREIHDVLAQQLTRLKMDLS 454 Query: 329 IVQRLAAD------NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 + + A ++ + + +L AV+ + LRP LD L L A+ Sbjct: 455 WIDKRLAQSVDETTRQALGEKVRSATELVDSSIGAVQHIATELRPVVLDALGLAAAVEWQ 514 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 + + + E G+ ++ +E L + LFR+ QE L N+++HA A+ V + + Sbjct: 515 VTQFQ-EHTGVQCQVDIDGEEPRLPHDHATGLFRILQETLTNVMRHAGATLVEVSLRMEP 573 Query: 443 ERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQR 498 + L L + D+G G+ G GL GMRER GG + I GT V V++P Sbjct: 574 DILTLSVRDNGRGITAGELSNMHSIGLLGMRERALLFGGKVTIHGIPEKGTTVVVTMPLS 633 Query: 499 YV 500 Sbjct: 634 AA 635 >UniRef50_C6CGT0 PAS/PAC sensor signal transduction histidine kinase n=11 Tax=Enterobacteriaceae RepID=C6CGT0_DICZE Length = 546 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 6/237 (2%) Query: 264 LTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAI 323 ++ L +G I +R + L+ + + LA + + E R+ +ARE+HD++GQ +T++ Sbjct: 308 ISILTVGRDITAIRYAEKKLEDSHMQLRLLARQREISREEERKHIAREIHDELGQHLTSM 367 Query: 324 RTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 R +++ + A DN + Q + LS VR + RLRP LD + L A+ L Sbjct: 368 RMSLSLMRMQFARDNPHMLTQLQNLMALSDKTIQVVRHVATRLRPNVLD-MGLTPALEWL 426 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 + + R L E L++ FRV QE L NI +HA+A+ V + ++ Sbjct: 427 RDDFIRQYR-CPCLLHAPEPEVVLNDECATAAFRVVQESLTNIARHAEATQVVISLENRE 485 Query: 443 ERLMLVIEDDGSGLPPG-SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 ++L + D+G G FGL M+ER LGG + I GT V ++ P Sbjct: 486 GLIVLSVHDNGKGFDAQTRKPNAFGLMSMKERGRMLGGEVVIESQPGAGTLVRLTFP 542 >UniRef50_A6SXZ6 Two-component sensor histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6SXZ6_JANMA Length = 490 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 117/234 (50%), Gaps = 7/234 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I + + + + A+ L+E + +E R +ARE+HDD+G +TAI+ Sbjct: 243 IMTNITASKLEQEEIIRSRAQLAELSEHVNTVKEKERTRIAREIHDDLGGNLTAIKMALA 302 Query: 329 IV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++ +RL ++ + + +E L + V R+ G LRP LD L AI +E E Sbjct: 303 LLTRRLPGKSSELLEKAAYVESLVDRTIETVHRIAGDLRPGILD-FGLVAAIDWQSKEFE 361 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + GI E L +Q LFR+ QE L NI KHA AS V++Q + + L Sbjct: 362 KQL-GIPCEFVSNQAEIDLDLDQATALFRIFQEALTNIAKHAQASLVSVQLMHTPQYVRL 420 Query: 448 VIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 I D+G G+ + + FG+ GM ER A+GG+L +S GT V+++LP Sbjct: 421 EIIDNGRGIELADRAKPKSFGIRGMVERSVAMGGSLSVSTAPKGGTVVAINLPL 474 >UniRef50_Q0B944 Multi-sensor signal transduction histidine kinase n=29 Tax=Burkholderiaceae RepID=Q0B944_BURCM Length = 707 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 15/318 (4%) Query: 194 VISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLM-NAIALIASQTWRDHP 252 V + + LSRF P +G G + + + P Sbjct: 381 VFGVSAMEAIGAPLSRFIPERFRAAHAKHVDQFGVTGVSERQMGRQRVLFGLRGNGEEFP 440 Query: 253 VDLLLSLLVQSLTGL--LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAR 310 ++ +S + + L ++ I + +L++ + L+ L E + +AR Sbjct: 441 IEASISQIRDASGKLYTVMLRDITERQRAENALKQSREELRELSANLQNVREEEKTRIAR 500 Query: 311 ELHDDIGQTITAIRTQAGIVQRLAADNASVKQ------SGQLIEQLSLGVYDAVRRLLGR 364 ELHDD+GQ +TA++ ++++ + Q + +L +VRR+ Sbjct: 501 ELHDDLGQQLTALKMDLSVIEQQLRAPGRAQPNDDVLSHLQGMRRLIDATVASVRRIAAD 560 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 LRP LDDL L AI L + GI + TLFR+ QE L N Sbjct: 561 LRPVMLDDLGLVPAIEWLANDFTNR-YGIDVERHIETGGLTFTSAGATTLFRIVQEALTN 619 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG---QQGFGLTGMRERVTALGGTL 481 + +HADA+ V L+ ++ +L + D+G G PG + FGL G+RER LGG + Sbjct: 620 VARHADATRVALRLDIEEGFCVLRVADNGRGAAPGGSAHEDKSFGLIGIRERAHMLGGNV 679 Query: 482 HISC--LHGTRVSVSLPQ 497 I G ++V+ P Sbjct: 680 TIDTALARGFSITVAFPL 697 >UniRef50_B9TKD1 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TKD1_RICCO Length = 383 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 7/237 (2%) Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITA 322 ++ L++G I L+ + L++ A+ Q L E E R+ +ARE+HD++GQ ++ Sbjct: 149 TIGALVIGHNITELKASERHLEESRAQLQMLTYHREEAREGERKRIAREIHDELGQLLSV 208 Query: 323 IRTQAGIVQRLAAD-NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 +R + D N ++ + + D V L RLRP L+ + A+ Sbjct: 209 LRLGISTLDYGYGDTNPDLRNKTAKMGAVVDQAIDMVHTLATRLRPAVLES-GIALALEW 267 Query: 382 LMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 L++E + GI L ++ + + + +FR+ QE L NI++H+ A V ++ Q Sbjct: 268 LVQEFS-KSTGIDCELSVPDEDIDFDKERALPVFRIVQESLTNILRHSQADHVEIELTQD 326 Query: 442 DERLMLVIEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVS 494 E L L I D+G G + + FG+ GM ER+ LGGTL I S GT + + Sbjct: 327 QEHLKLSIHDNGQGFEVSKATKKGSFGIIGMHERILMLGGTLEISSSSEQGTEIRLE 383 >UniRef50_C0ZJS5 Two-component sensor histidine kinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJS5_BREBN Length = 365 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 8/250 (3%) Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQ-HLAERLLETEESVRRDVARE 311 VD ++ L G + LR+++ + E R Q L ++ +E R+ +ARE Sbjct: 102 VDYPVAASSARLEDESQGKLVMILRDMSAQQRVEKERYQYKLTNFAIQAQEEERKRIARE 161 Query: 312 LHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLD 371 LHD +GQ + +I +V++ V Q + ++ + V+R+ LRP LD Sbjct: 162 LHDGVGQALYSILVGLNVVRQRELSEP-VMQHVAELVNMTSKAMEEVKRMALELRPSALD 220 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 DL L A+RSLM+ +E + I L + ++ S L+R+ QE + N K+A A Sbjct: 221 DLGLLPALRSLMKRVE-KTFHIQVELHVQGEKRRYSAAMETALYRIVQEAMTNTAKYAKA 279 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGSG---QQGFGLTGMRERVTALGGTLHISCLH- 487 S + + +++ +++ I DDG G +G G+ GM+ER LGGT+ I Sbjct: 280 SHLGIMFENREKEIVVTIVDDGVGFEVEKTLKIGKGLGVFGMKERAQLLGGTVDIRSAPE 339 Query: 488 -GTRVSVSLP 496 GT V V +P Sbjct: 340 EGTTVIVRIP 349 >UniRef50_C0A2L7 Signal transduction histidine kinase-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L7_9BACT Length = 503 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 98/491 (19%), Positives = 173/491 (35%), Gaps = 37/491 (7%) Query: 37 DMAVLLFP-FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLL 95 + ++ +P G+ L + L R +P +L + +L L +G+ L Sbjct: 10 EHSLFFWPPGGIILAIFLLRGRRVFPGVLIGSFA--GYLCGLDPLHSLLSASLGTAHAAL 67 Query: 96 PVALISRYRHQRDWRTLLLQGAALTAAA--LLQSLPWLW----------HGKESWNALLL 143 LI R + + A+ A L+ S W H + L Sbjct: 68 GCTLIRRAWPRGPRYIPSARFFAIMIVAGALIPSTLTAWPAWYFVEQYIHPGIGFRQGFL 127 Query: 144 TLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGL 203 G ++ I L ++ G ++ + W + L + WL L Sbjct: 128 EWWLGDCISVIVFTPAVLLLRPSFRENGRR-STKSMLWALGQIALCLYV----AWLVLTK 182 Query: 204 PDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQS 263 L + A+A G G ++A + + Q LSL Q+ Sbjct: 183 GGPRPVMAITVLIVLGCAIALRCGVIGIIVANVALLVVAACVQAGFGGTAGTNLSLGQQT 242 Query: 264 LTGLLLGAGIQRLRELNQSLQ---KELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 ++ + + ++ R+L+ +E RR ++ +LHD + QTI Sbjct: 243 EFDAIIFEVTGICLLVAGGFYDYWRADRELHGVSSRVLKAQEIERRRLSSDLHDGVSQTI 302 Query: 321 TAIRTQAGIV---QRLAADNASVKQ-SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLE 376 A + + +++ + A + + G +RR + LRP LD Sbjct: 303 FAAIMRLRLASAGRQVGTEPAPTPESEMNAVADDLSGALKDLRRTVAGLRPEMLDQSPFT 362 Query: 377 QAIRSLMREMELEGR-GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 + E+E ++ E + L R LFR+ QE ++N ++H AS V Sbjct: 363 HVLADYCAEVEGRSPADVLFSDETTGEAENLPLEVREHLFRLVQEAVSNALQHGKASFVQ 422 Query: 436 LQG---WQQDERLMLVIEDDGSGLPPGSGQQ----GFGLTGMRERVTALGGTLHISCLH- 487 + ++ L + I D+G G G+ GL M ER +GG L I Sbjct: 423 VTLSPSSRRPGWLRMRITDNGCGFDLAVGETDDRLHLGLRTMEERARMVGGALRIDSSPG 482 Query: 488 -GTRVSVSLPQ 497 GT V+VS+P Sbjct: 483 RGTLVTVSVPL 493 >UniRef50_A1AUQ4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUQ4_PELPD Length = 489 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 8/285 (2%) Query: 222 LAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLG--AGIQRLREL 279 A + A + NA A++ S++ R PV + S+ ++ G I Sbjct: 204 FAAQFRRTVAQHREVDNAEAIVVSKSGRRIPVHIKHSVTRVGEMSIMQGLFRDISERVRA 263 Query: 280 NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI-VQRLAADNA 338 + L + + + L++ L +E R +AR++HD+IGQ++T ++ RL A + Sbjct: 264 EEQLVELNQKLRALSDHLQTVQERERLAMARDIHDEIGQSLTVLKLDLEWIAHRLPAKES 323 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 +V++ + + AV+R+ LRP LD L L AI + E GI + Sbjct: 324 AVQERVNEMRWNIEQLTSAVQRIAADLRPPLLDSLGLAAAIDWHVAEFS-RRSGIECFVM 382 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 + L + R+ QEGL N+++HA A+ V++ ++D +L+L I D+G G+ P Sbjct: 383 LNEEVDPLEPQLATAVMRIVQEGLTNVLRHARATEVSVSLCKRDGQLVLEIGDNGRGIRP 442 Query: 459 G--SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 Q +GL GM+ER G L + GT + V++P + Sbjct: 443 EEIESPQAYGLMGMQERARICRGELTVGGAEGGGTLLRVTVPLQS 487 >UniRef50_D1C419 Histidine kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C419_SPHTD Length = 437 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 13/334 (3%) Query: 176 SQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIAT 235 P + L ++L ++ L + F +P ++ T Sbjct: 86 MTPGHILVFFLGEAVMLGTLAWLDASFLVMSFAIFVQLFAFIPPTWATAGVIALTLILFT 145 Query: 236 LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 A+ + + S++ ++ A ++ +E + + + +A LAE Sbjct: 146 RDAALDGQYLWENEGALLGAVFSVIFTIISIFFFAAITRQSQERKRLIDELMATRAALAE 205 Query: 296 RLLET-EESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLG 353 R + R+ +ARE+HD + Q T+I + + A+ ++++ + + Sbjct: 206 RERQAGVIEERQRLAREIHDTLAQGFTSIVMHLEAAEPHIPAEATALRRHVEQARATARD 265 Query: 354 VYDAVRRLLGRLRPRQLDDLT-LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 + RRL+ LRP QL+ L A+ + E GI +H+ L + V Sbjct: 266 SLNDARRLVWALRPEQLEQGGSLADALARVAERWS-EDTGITAHVTVDGTPVPLPPDVEV 324 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP-------PGSGQQGF 465 TLFR+ QE L N+ KHA A V + D+ ++L ++DDG G PGS GF Sbjct: 325 TLFRITQEALANVRKHAQAGRVDITLSYLDDEVLLDVQDDGVGFDRATVSATPGSVNGGF 384 Query: 466 GLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 GLTGMRER+ LGG+L I GT ++V+LP Sbjct: 385 GLTGMRERLRLLGGSLMIESAPGEGTSITVALPL 418 >UniRef50_A0LPI6 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPI6_SYNFM Length = 650 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 8/235 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 I ++ +LQ+ + L+ +LL +E R+ +ARELHD IG +++ I+ Sbjct: 416 EDISERKQTEAALQESERQLHLLSSQLLAAQEQERKRIARELHDGIGSSLSTIKFSLEAT 475 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 R + +S Q + L+ D RR++ LRP LDD + + + Sbjct: 476 LRRMRQGSQSYESLQNVIVLTQHAIDESRRIMTDLRPPILDDFGILTTMDWFCAQFRKAY 535 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 + E + E + E ++ +FRV QE L+N K++ AS V + + L L I Sbjct: 536 THLRVDKEIEVVEEDIPEALKIVIFRVLQEALHNTAKYSQASRVKIGLRKTPGTLELKIG 595 Query: 451 DDGSGLP------PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 D+G G G GL M+ER GGT + GT + + P Sbjct: 596 DNGIGFDRTSASRRSDSSSGLGLPSMKERTELSGGTFSVESTEGAGTTLCATWPL 650 >UniRef50_C6XAP9 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAP9_METSD Length = 446 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 2/232 (0%) Query: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 + A I ++ + L N L + LE +E RR +AR+LHDD+GQ + AI+ A Sbjct: 208 VFAADITEIKTAESEISNLLRENHFLLRQALELQEEERRHIARDLHDDMGQYLNAIKANA 267 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + + S+ + I S +Y + R+L+ RLRP LD+L L A++ L+ + Sbjct: 268 TSLVNMPDLPPSISEVALHIISHSDHIYRSARQLIHRLRPAALDELGLGAALQHLIDTWK 327 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 G L L + + ++RV QE + N +HA AS + + + Q +RL++ Sbjct: 328 YPANGTRYQLAIDDALDHLDDKLTINIYRVIQEAITNAARHAQASLIDVHLFMQGDRLIV 387 Query: 448 VIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 I DDG G+ +G GL GMRER+ A+ G +S GTR+ +P Sbjct: 388 DITDDGCGISQAQPHKGLGLAGMRERIKAVDGKFEVSSAAGTGTRIRAVIPI 439 >UniRef50_B8FFK0 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFK0_DESAA Length = 832 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 7/219 (3%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV- 340 ++K + L+ R++ ++E+ R+ +ARELHD++GQ +T +R A ++ D+ + Sbjct: 607 EIKKAQEALRRLSNRMIISQEAERQAIARELHDELGQILTVLRMDAVWFKKRLKDSDAAT 666 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 ++ + +L + VR + RLRP LDDL L A+ + E GI E Sbjct: 667 QERASAMCELIDKTIEDVRGIAVRLRPGVLDDLGLVDALEWYTSDFE-RRTGITCIFEHD 725 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG- 459 + L +R+ QE L N+V+HA + E L+I D+G G G Sbjct: 726 -NIPNLGNAISTAAYRIAQEALTNVVRHASTDRADVSLSFDQEEFTLIISDNGVGYDGGM 784 Query: 460 -SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 +G G+ GMRER GGTL + G+R+ + Sbjct: 785 VEESEGLGIAGMRERAMLAGGTLEVEAGEDAGSRIIFRI 823 >UniRef50_B3U4S0 Response regulator receiver n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4S0_9BACT Length = 998 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 6/241 (2%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 Q + +++ I + Q L + + L RL E R +ARE+HD++GQ +T Sbjct: 756 QIIGAVVVFLDITERKRAEQQLTLSHDQLRKLTARLESVREEERILIAREIHDELGQALT 815 Query: 322 AIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIR 380 ++ + ++ ++A + +++ + I L G +V+R+ LRP LD L L AI Sbjct: 816 GVKLELCLLHDQIAEVSPMMRKKLESISTLVDGTIQSVQRIATELRPVVLDQLGLIPAIE 875 Query: 381 SLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ 440 E + GI L+ + LS +FR+ QE L N+ +HA AS V + + Sbjct: 876 WQAHEFQAR-TGIQCTLDVYLRAVTLSHAGSTAMFRIFQEILTNVARHAQASVVHITLQE 934 Query: 441 QDERLMLVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGT--LHISCLHGTRVSVSLP 496 Q L+L + D+G G+ + GL GMRER LGG S GT V V +P Sbjct: 935 QAGSLVLDVRDNGRGVTDAELADPHSLGLVGMRERALLLGGETIFTGSPGTGTAVRVRIP 994 Query: 497 Q 497 Sbjct: 995 L 995 >UniRef50_B5YIR1 Sensory box histidine kinase, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR1_THEYD Length = 726 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 69/234 (29%), Positives = 127/234 (54%), Gaps = 6/234 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 +G I +++ + L+K + L+ L E+ R+++A+E+HD++GQ++TA++ Sbjct: 492 IGRDITYRKQIEEELRKSREALRKLSVYLQNIRENERKEIAKEIHDELGQSLTALKLSLS 551 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +++ D + + + + V+ + RLRP +D LTLE AI ++E E Sbjct: 552 WIKKRVED-EFLNKKFDETLTIVNALIKQVQNISNRLRPSLIDYLTLEDAIMWQVKEFE- 609 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 IV +++ LS+N +TLFR+ QE L NI +HA+A+ V ++ ++ + ++L+ Sbjct: 610 RNTSIVCNVDIAEHGIKLSKNVSLTLFRIFQEALTNIARHANATEVDIKMFRSEASILLI 669 Query: 449 IEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQR 498 I+D+G G+ + FGL MRER ++ TL I GT + +S+P R Sbjct: 670 IKDNGIGISDEKIKSPESFGLMAMRERAYSINATLDIHRSYEGGTEIIISVPVR 723 >UniRef50_B1Z4G8 Multi-sensor signal transduction histidine kinase n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z4G8_BURA4 Length = 665 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 14/312 (4%) Query: 202 GLPDELSRFTPFCLALPIIALAWHYGWQGALIATLM-NAIALIASQTWRDHPVDLLLSLL 260 + LSRF P +G G + + + P++ +S + Sbjct: 348 AIGAPLSRFIPERFRAAHARHVEQFGVTGVSERQMGRQRVLFGLRGDGTEFPIEASISQI 407 Query: 261 VQSLTGL--LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQ 318 + L ++ + +L++ + L+ L E + +ARELHDD+GQ Sbjct: 408 RDGTSKLYTVMLRDVTERVRAETALKQSREELRDLSANLQNVREEEKTRIARELHDDLGQ 467 Query: 319 TITAIRTQAGIVQR----LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 +TA++ V+ + A N V++ + L +VRR+ LRP LDDL Sbjct: 468 QLTALKMDLSAVELGLAGVVAPNTGVREQLGGMHGLIDSTVASVRRIAADLRPVMLDDLG 527 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 L AI L + R I + ++A + TLFR+ QE L N+ +H+DA+ V Sbjct: 528 LVPAIEWLANDFTRRYR-ITVDRDIAPVDTAFTGVGATTLFRIVQEALTNVARHSDATNV 586 Query: 435 TLQGWQQDERLMLVIEDDGSGLPP----GSGQQGFGLTGMRERVTALGGTLHISCLH--G 488 L ++ +L I D+G G P + FGL G+RER GT+ + G Sbjct: 587 QLALKLEEGYCVLRIADNGHGAPENARNEQDRPSFGLIGIRERAHMFEGTVTVDNRPGAG 646 Query: 489 TRVSVSLPQRYV 500 ++V+LP + Sbjct: 647 FTITVALPLHAI 658 >UniRef50_Q01NC5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC5_SOLUE Length = 437 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 8/328 (2%) Query: 176 SQPINWRGRHLVWYLLLFVISL-WLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIA 234 + P R L Y + W F + +A+ AL Sbjct: 107 TGPFQVLTRELAIYWSVLEPVFEWTPQQRRTRGYPFLRDEVFPRRMAMLGIADQIRALNE 166 Query: 235 TLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGA-GIQRLRELNQSLQKELARNQHL 293 + ++ L + + L +++ + GL+L A I+++ L + +HL Sbjct: 167 SQLHDGKLRVEALFSQYGRRLAVTIALVIGLGLVLAAFSIRKILALENASSASQEALKHL 226 Query: 294 AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL--AADNASVKQSGQLIEQLS 351 + RL+E +E RR ++RELHD++GQ++T + + + +L D SV I++ Sbjct: 227 SARLVEAQEDERRSISRELHDEVGQSLTGVLLEMANLSKLIRTRDPESVAAKAAEIKREV 286 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 VR + LRP LDDL L A++ RE+ G+ ++ L E + Sbjct: 287 ENSIGVVRNMALLLRPSMLDDLGLVPALQWQAREVSKR-SGLWVSVDAASVSEDLPEEHK 345 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMR 471 ++R+ QE L+N V+HA A V + QQ + L L IEDDG G G+ G GL G++ Sbjct: 346 TCIYRIVQEALHNAVQHAGARHVKVAVEQQPDELRLAIEDDGKGFDAQQGR-GMGLLGIQ 404 Query: 472 ERVTALGGTLHISCLH--GTRVSVSLPQ 497 ERV LGG + GT + V+LP Sbjct: 405 ERVGYLGGKFEVGSAPGKGTALKVTLPL 432 >UniRef50_Q39TN6 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN6_GEOMG Length = 439 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 5/227 (2%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 + + L L + + L+ L+ E R VARE+H+++GQ + A++ +V + Sbjct: 199 ERSKREEGLVDSLKKQRRLSFHLMSAREEERTAVAREIHEELGQMLAALQLNVSLVTKEY 258 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 D+A + Q +EQL V R+ LRP LD L L AI +E E + GI Sbjct: 259 LDHAKLVARTQAMEQLITSSIMTVNRISSELRPVMLDILGLADAIEWQAKEFEKK-SGIR 317 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 + E + + ++R+ QE L+N+ +HA A V + ++ R+ L + D+G Sbjct: 318 CKTTILLAEKKVDRDVSTAVYRIVQEALSNVARHATADHVRVTLVEKVGRVTLSVSDNGR 377 Query: 455 GLPPGSG--QQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLPQ 497 G+ Q G+ GMRER A GG L I S GT V +P Sbjct: 378 GITEREKNNPQSLGIAGMRERAEAFGGRLRICGSSRQGTTVVARIPL 424 >UniRef50_A1HRV6 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRV6_9FIRM Length = 473 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 17/303 (5%) Query: 209 RFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLL--VQSLTG 266 R + + + + W +LI + ++A ++ + + + L Sbjct: 165 RNFFIGIIMMCVIATFLATWLTSLIIRPIRSLADAVAEIQSGNLSARVEAKTGDEVGLLA 224 Query: 267 LLLGAGIQRLRE-------LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQT 319 + + L+E L + L+ + A L ++L +E R+ ++RELHD+ GQ Sbjct: 225 VAFNQMVAGLKEKEKENNLLLEELRHKEAMRAFLIKKLFTIQEDERKRISRELHDETGQL 284 Query: 320 ITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + ++ ++ D K+ Q +++ + +R++ LRP LDDL + A+ Sbjct: 285 LASLLAYMKLLLSKLTDQQQ-KELLQEARDVAVNALEGLRKIAVELRPPVLDDLGVTAAM 343 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 + ++ + +G+ H + L + L+R+ QE L NI KHA AS V + Sbjct: 344 QKYIQTFSGQ-QGLKVHFSVPEKQLELDPEVSLALYRILQESLTNIAKHARASNVYVCLS 402 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQG----FGLTGMRERVTALGGTLHISCLH--GTRVSV 493 + + LV+ DDG G+ G G G+ GM+ER LGG+L I + GT V Sbjct: 403 AAGQTVRLVVRDDGLGIDGGLESAGQKNRLGIYGMKERAELLGGSLDIHSENGCGTVVIA 462 Query: 494 SLP 496 +LP Sbjct: 463 TLP 465 >UniRef50_C0GKL6 Histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKL6_9FIRM Length = 379 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 11/248 (4%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 +++ G+ L L+ + L + + Q ++ R+++ +E R VARE+HD Q++ Sbjct: 134 LETQVGMALELISGGLQGVTVKLDE-IQLRQQVSLRIIKAQEEERLRVAREIHDGPAQSM 192 Query: 321 TAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + +A I ++L + + V+ ++ + VR+++ LRP LDDL + + Sbjct: 193 ANVVLRAEICEKLMSVEPDKVRAELHDLKDMVKESLQEVRKIIFDLRPMVLDDLGIVPTL 252 Query: 380 RSLMREMELEGRGIVSHLEW-RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 R + E++ + L +E L+ V +FR+ QE LNNI KHA+A ++ Sbjct: 253 RRFIAELQKR-TDMNIELVVLGGEEQRLASVLEVAIFRIVQESLNNIYKHAEAKRCVIKL 311 Query: 439 WQQDERLMLVIEDDGSGLPPGSGQQ-----GFGLTGMRERVTALGGTLHISCLH--GTRV 491 R+ + I D+G G Q FGL GMRERV L G + I GT + Sbjct: 312 EILPGRINISIADNGRGFDTERTMQNMDVDCFGLLGMRERVELLDGQIKIVSKPEKGTEI 371 Query: 492 SVSLPQRY 499 VS+P + Sbjct: 372 HVSIPIKG 379 >UniRef50_B8G147 Multi-sensor signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G147_DESHD Length = 779 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 11/244 (4%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + + GL LG I+ EL L K+ + L +++ +E R+ ++RELHD+ Q+I Sbjct: 519 LLNSIGLQLGVAIEN-AELWVELNKKEMLRKQLLNKVITAQEEERKRISRELHDESSQSI 577 Query: 321 TAIRTQA-GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 A+ +++ + D + ++ + + + +++ LRP LDDL L AI Sbjct: 578 AALGVGLKSVIEIMEFDKEYALTVLEDLKNNTSSILKELHQIIYDLRPSLLDDLGLLPAI 637 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 R + L GI H+ + D L++ +T+FR+ QE + N VK+++A + L Sbjct: 638 RWYVES-RLSNTGIKPHVAFTGDPLRLTDETEITIFRIVQESITNAVKYSNAKNLYLGLE 696 Query: 440 QQDERLMLVIEDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISCL--HGTRV 491 + L + IEDDG G G++ FGL GM ER +GG + I +GTR+ Sbjct: 697 FGQDSLFVYIEDDGDGFNIEKALAQKDGKESFGLLGMTERAELIGGEIEIKSRSNNGTRI 756 Query: 492 SVSL 495 + L Sbjct: 757 ELKL 760 >UniRef50_A1HU07 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU07_9FIRM Length = 478 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 11/245 (4%) Query: 265 TGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 + A L++ L+++ HL ++++ +E R+ +ARELHD+ GQT+ ++ Sbjct: 225 LAVAFNAMADYLQQTMDELKQKEEARTHLLQKVIVAQEEERKRIARELHDETGQTLASLM 284 Query: 325 TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 + ++ + + + DAV R+ LRP LDD+ L A+ + Sbjct: 285 MGLKCLAATCPESERGCR-LEEMRLAVKKTIDAVHRMAIELRPSILDDMGLIPAVEKYVN 343 Query: 385 EMELEGRGIVSHLEWRID-ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 + GI + L + E L VT++R+ QE L NI K+A A V + Sbjct: 344 DFR-HNYGIDTDLHIQWQCEKRLVHEIEVTVYRIVQEALTNIAKYAKADNVCIIMTCDRR 402 Query: 444 RLMLVIEDDGSGLPPGS------GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 L +++EDDG G + GL GM+ER T +GG L I GT + + + Sbjct: 403 GLEVIVEDDGVGFDADAILQQSVAGTQLGLFGMQERATLVGGALTIESTPGRGTTLFLRI 462 Query: 496 PQRYV 500 P Sbjct: 463 PFMEA 467 >UniRef50_C6P6J2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6J2_9PROT Length = 355 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 118/280 (42%), Gaps = 17/280 (6%) Query: 226 YGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQK 285 + W+G + L+ T + + GL + +L E+ L + Sbjct: 66 WSWEGRVTLANGEMKWLVLGSTPQSGENGKIEW------EGLAVNVTKAKLDEI--ELLR 117 Query: 286 ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-QRLAADNASVKQSG 344 + + + + + +E R +ARE+HD+IG +TAI+ + +RL + Sbjct: 118 SQQQLREFSSHIQDAKEQERLRIAREVHDEIGGLLTAIKMDLAWIKERLPKSKKILTDKT 177 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 IE + A R L LRP LD + AI E E GI L +E Sbjct: 178 SAIENMVGKAMTAARNLAHSLRPGYLDSFGIVAAIEMEASEFEQR-TGIKCLLAHNEEED 236 Query: 405 AL---SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL--PPG 459 + + LFR+ QE L NI+KH+ A+ V + E + L I D+G G Sbjct: 237 EELELHPDVSIALFRIFQEALTNIMKHSRANKVEVLIHNSQEHIELTISDNGCGFSQDAR 296 Query: 460 SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 S + FGL G++ERV GG + IS GTRV V +P Sbjct: 297 SKPRSFGLRGIQERVAHFGGEVSISSTPEQGTRVYVKIPH 336 >UniRef50_Q67MG9 Sensor protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG9_SYMTH Length = 558 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 9/267 (3%) Query: 236 LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 + + L+ + P D + + GL + L L ++ L Sbjct: 273 VAGIMVLMIPPSRYLSPSDREILTALGEQIGLAID-----RARLYDQLAEKERLRGRLLA 327 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 RL+ +E RR +ARELHD+IGQ +TA+ + R ++Q +++++ Sbjct: 328 RLITAQEDERRRIARELHDEIGQALTALVVTLDFLVRHPLSEEMLRQRLVAVKEMAETGL 387 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 VRR++ +RP LDDL LE AIR L+R E G+ ++ E L + +T+F Sbjct: 388 TEVRRVIHEMRPTALDDLGLEAAIRWLVRRYED--AGLKIDVQIEGLEERLPDYIEITVF 445 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVT 475 R+ QE N VKHA AS + + + L + + DDG G +G GLTG+RERV+ Sbjct: 446 RLIQEACTNTVKHAAASHIRIALRHRGNWLTVEVTDDGKGFDIKRRGEGVGLTGIRERVS 505 Query: 476 ALGGTLHISCLH--GTRVSVSLPQRYV 500 GG L I GTRV LP Sbjct: 506 LAGGKLTIESGPDSGTRVYAELPVEGA 532 >UniRef50_B4UAL2 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Anaeromyxobacter RepID=B4UAL2_ANASK Length = 662 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 16/364 (4%) Query: 146 TGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPD 205 G AP L+ + LA W + ++ + G W + + + Sbjct: 278 WGVKAAAPAELMVFAPLAAAPWGVVVRQRTAEALPTEGDVPWWLVAAGLAAHLGIAAAFA 337 Query: 206 -----ELSRFTPFCLALPIIALAWHYGWQGALIAT-LMNAIALIASQTWRDHPVDLLLSL 259 ++R W + T + + + L Sbjct: 338 WGAARSVTRPIGVLTGEAERIAGGELDWSIPDLGTDEVGRLGRSLDRMRLALRRLLDDVA 397 Query: 260 LVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQT 319 V + + L E L L +L+ +E R+ +ARELHD+ Q+ Sbjct: 398 RVNAELEQRVEERTHALNEAYAQLAAREEARAQLLRKLISAQEDERKRIARELHDETSQS 457 Query: 320 ITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + + Q + ++ +++ + V R++ LRP LDDL L AI Sbjct: 458 LAVLAMGLEAAQDAMRGGK--APRLEEVKAVAVRTLEDVHRIILDLRPSVLDDLGLLSAI 515 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 R +L RG+ E+ + L LFR+CQE ++NI +HA A+AV ++ Sbjct: 516 RWYAER-QLGTRGMSVRCEFGELDRRLPPEMETALFRICQEAMSNIARHAQATAVLVEVA 574 Query: 440 QQDERLMLVIEDDGSGLPPGS-----GQQGFGLTGMRERVTALGGTLHISCLH--GTRVS 492 +D+ + IEDDG G + G++ +GL G+RER LGG+ + GTRV Sbjct: 575 LEDDVFRIDIEDDGRGFDAEAVARREGRRSWGLMGIRERAEILGGSATVESAPGKGTRVE 634 Query: 493 VSLP 496 V +P Sbjct: 635 VRIP 638 >UniRef50_UPI000174566C two-component hybrid sensor and regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174566C Length = 399 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 9/231 (3%) Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 +L + +HL+ RLL +E R+ ++RELHD + Q +T+I + ++ + N Sbjct: 147 QLLAKSRHMQEDLRHLSRRLLTVQEEERKRISRELHDVVAQALTSINLRLITLKTESNSN 206 Query: 338 AS-VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 A +++ + +++ + V R LRP LDDL L A++S + ++ GI Sbjct: 207 ARNLRRRIAMTQRVIERSVEIVHRFARDLRPTLLDDLGLIPALKSYLTAY-MQRTGIRVS 265 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 + ++ +R L+RV QE L N+ +HA AS + + + I D+G G Sbjct: 266 FSVSPNIESIDSTRRTVLYRVAQEALTNVARHAKASQANVSIRLHANNVNMQIHDNGCGF 325 Query: 457 PPG-----SGQQGFGLTGMRERVTALGGTLHISCLHG--TRVSVSLPQRYV 500 + GL GM+ERV +GGT ++ G T V V LP + V Sbjct: 326 QVEGNAFARSSKCLGLLGMKERVEMVGGTFVVASAPGKETTVQVELPGKKV 376 >UniRef50_B9TG52 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TG52_RICCO Length = 335 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 10/246 (4%) Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 L G++L I + + Q +++ Q L + + +E R +ARE+HDD+ Sbjct: 88 LGQGAVQWDGIMLN--ISQSKHEKQEIEQARRDLQALTAHIHQVKEQERVSIAREIHDDL 145 Query: 317 GQTITAIRTQAGIVQRLAADNASV-KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 G +TA++ + + D+ V + +++ + +DAV R+ G LRP LD L L Sbjct: 146 GGNLTAMKLGLSTIIQQIEDSQQVNMEQATMLQAIINQTFDAVHRISGNLRPNILD-LGL 204 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 A+ + + + + GI + + +Q + LFR+CQE L+NI K+A A V+ Sbjct: 205 VDALEWQVSQFKKQL-GITARFVTNCHDLECDPDQSMALFRICQEALSNIAKYAQADLVS 263 Query: 436 LQGWQQDERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHIS---CLHGTR 490 ++ D+ L + I D+G G+ P FGL GM+ER ALGG HI GT Sbjct: 264 VELSLVDQALFMTISDNGVGIAPADKIKPNSFGLRGMQERAAALGGECHIEASSSGPGTC 323 Query: 491 VSVSLP 496 + V P Sbjct: 324 IHVRAP 329 >UniRef50_Q1CZ92 Sensor histidine kinase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CZ92_MYXXD Length = 1080 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 11/236 (4%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L L + + + R + L RL +E R+ +ARELHD+ GQ +TA++ Sbjct: 830 LALRTLQAEREQALEEAEAGRERLRRLTMRLEAAKEEERKHLARELHDEFGQALTAVKLN 889 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 G++ A+ + + + L + VR L LRP QLD+L L A+ +RE+ Sbjct: 890 LGLMNTFASPSVT---RLPEVVALIDRLIGQVRALSVDLRPPQLDELGLVAALEWYLREV 946 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 G+ +LS+ + + +FR+ QE + N ++HA A + ++ + Sbjct: 947 -ARRSGVELVFTASSAPPSLSKGRDIAVFRIIQEAVTNALRHASARRIDVRLETVGCVIR 1005 Query: 447 LVIEDDGSGLPP-----GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 L + DDG G G G FG+ GM+ERV LGG ++ GTRV + Sbjct: 1006 LEVRDDGKGFDVNQVLMGRGPGSFGVFGMQERVRDLGGHFEVTSRPGEGTRVVAEV 1061 >UniRef50_A0LNC5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNC5_SYNFM Length = 561 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 9/231 (3%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV--QR 332 + +E ++L+ ++ + L+ +LL +E R +A ELHD IGQT+ A++ R Sbjct: 318 QRKEAERNLRVSESQLRVLSSKLLTVQEEERARLAHELHDSIGQTLVAVKFGIENALKGR 377 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 +V Q + + + R+L LRP LDD AI L E E G Sbjct: 378 TVGGLDAVSQLLDPLVPMVQNAVEEARKLYMGLRPTILDDFGAIAAIGWLCSEFEETHTG 437 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 ++ IDE + ++ LFR QE LNN +H++A+ V L ++ + LV+ED+ Sbjct: 438 MLVEKTVDIDEEHIPIPVKIVLFRTVQEALNNAARHSEATRVGLFLKKEKSGITLVLEDN 497 Query: 453 GSGLP-----PGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLP 496 G G G+ G G+ M+ER+ GGT I GT + P Sbjct: 498 GIGFDSSRYLSGAQGTGLGIVSMKERIELSGGTFSIESQSGAGTAIRAFWP 548 >UniRef50_B8CZJ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ7_HALOH Length = 352 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 14/318 (4%) Query: 185 HLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIA 244 L ++F + + + + + +LP+I+ + L ++L+ + + Sbjct: 41 LLFIIYVIFGYIVGFLISISSQSVIYIAANFSLPVISNVLGRSFITYLASSLVFYLCGLI 100 Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESV 304 P L + + G ++ + + E Q + N+ L Sbjct: 101 FFPLIGVPFSFNLYISLGVGIGSVMISLFFYVLEQQQEKLELEKENKKL------AIIEE 154 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRL--AADNASVKQSGQLIEQLSLGVYDAVRRLL 362 R +ARELHD + Q + I ++ L D+ V+++ + ++++ V +R ++ Sbjct: 155 RNRIARELHDSVSQNLFGINLNLNTLEVLIDEGDHDRVRKTVEDLKKMVQEVQTEMRLMI 214 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGL 422 L+P L + +A+ SL+ + +E+ + ++ L+RV QE L Sbjct: 215 YELKPVHLREKDFFEALESLVELYRNR-YNLKITTHLNGNENRVESEVQLALYRVAQEAL 273 Query: 423 NNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG---FGLTGMRERVTALGG 479 NNIVKHADA V++ + + + I+D+G G G + G FG++GM++RV +GG Sbjct: 274 NNIVKHADADKVSITLGIGNNGITMAIKDNGKGFNVGRVKAGSGRFGISGMKDRVNDVGG 333 Query: 480 TLHISCLH--GTRVSVSL 495 I GT V VS+ Sbjct: 334 DFDIESQPGQGTTVKVSI 351 >UniRef50_B2A6W3 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W3_NATTJ Length = 490 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 38/304 (12%) Query: 228 WQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGA---------------- 271 W LI +++ I +P+ L+S Q G L G Sbjct: 172 WLTVLIVSIVGLITAYLLSLIIINPIYRLVSATEQVAKGHLHGIPLVVTNDEIGKLSLSF 231 Query: 272 --GIQRLRELNQ-------SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITA 322 I+ L+ L + L+K+ + L +++ +E R+ ++RELHD GQ++T Sbjct: 232 KKMIEGLKSLRENNESCWVQLEKKEEMRKKLLNKMMSAQEEERKKISRELHDGTGQSLTT 291 Query: 323 IRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 ++ + D K+ + + +L+ V D ++ L LRP LDDL L+ A+ Sbjct: 292 LKLALKQISET-NDLEEAKRMSEELRELTGDVIDEIKSLARDLRPSVLDDLGLDYALEKY 350 Query: 383 MREMELEGRGIVSHLEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 ++E++ G+ + ++ D+ L ++R+ QE +NN +KHADAS + + Sbjct: 351 LKEIQGR-TGVSTEFWFQADQGLKLEPEISTNIYRIVQESVNNSIKHADASKIDVIVKTI 409 Query: 442 DERLMLVIEDDGSGLPPGS--------GQQGFGLTGMRERVTALGGTLHISCLH--GTRV 491 +L+++IEDDG G +G G+ GM ER +GG L I GT V Sbjct: 410 SSQLIVIIEDDGKGFDLEQFSDNYKQNETRGLGIFGMEERAELIGGHLAIESTPGDGTAV 469 Query: 492 SVSL 495 + + Sbjct: 470 YLKI 473 >UniRef50_C6P0E7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0E7_9PROT Length = 694 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 11/249 (4%) Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTIT 321 Q + + I QSL++ + L ++L +E R+ +A ELHD IGQT++ Sbjct: 437 QFMMSQAIVCDISYRSNAEQSLRESEHAKRMLTAQVLSAQEKERKRIANELHDGIGQTLS 496 Query: 322 AIRTQAG-IVQRLAADN-ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 AI+ + +L + + G + +RR+ LRP LDD+ + Sbjct: 497 AIKFYVENAISKLNERTIDDSIRIFGNVIPKLQGAIEEMRRISMDLRPSMLDDIGTLATL 556 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 R+ + L I ES + R +FR+ QE +NN K++ A+ + + Sbjct: 557 SWFCRQFQGVYESFRIELLLDIKESDIQLPLRTAIFRIVQETMNNCAKYSQANCIHISLI 616 Query: 440 QQDERLMLVIEDDGSGLP-------PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTR 490 + + + L +EDDG G + G GL MRER GGT + GT Sbjct: 617 KTCKEIELTVEDDGRGFDHAEVCARIANAGGGMGLVSMRERAELSGGTFSVESAKCRGTS 676 Query: 491 VSVSLPQRY 499 V V+ P + Sbjct: 677 VRVTWPFQE 685 >UniRef50_C6XAR1 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAR1_METSD Length = 465 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 7/234 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA- 327 + I + + +++ R L+ L + +E RR +ARE+HDD+G +TAI+ Sbjct: 231 IITNITQSKNEKLEIERSRQRMAELSAHLTQVKEQERRRIAREIHDDLGGNLTAIKIGLT 290 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 I++R+ D + + +E + +D V R+ LRP L+ L + A+ + E Sbjct: 291 SIIKRINPDEPKLVEKALNLESIVDRTFDIVHRIASDLRPDVLE-LGIVAALEWQCGQFE 349 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + E A+S ++ +TLFR+CQE ++NI KHA A V ++ +D +ML Sbjct: 350 KQFS-LPCRFYSSQTELAVSADEAITLFRICQEAMSNIAKHARARQVEVELLVEDRDIML 408 Query: 448 VIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQ 497 I DDG G+ + FGL GMRERV AL G+L + GT V V +P+ Sbjct: 409 RIVDDGQGIRMQDQHKANSFGLRGMRERVAALDGSLEVEKRVRGGTAVQVKIPR 462 >UniRef50_A6GQJ7 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GQJ7_9BURK Length = 362 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 3/246 (1%) Query: 254 DLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELH 313 D+ + Q++ +R+ E LQK R + L+ L E R +ARE+H Sbjct: 112 DITERVEAQNIRAAAQAELERRVIERTAQLQKAHDRMRRLSAHLTTVREEERTRIAREMH 171 Query: 314 DDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 DD+G +TA + + A++ + + + L+ G +++RR+L LRP LD L Sbjct: 172 DDLGAKLTAFDLELKALSYRCANDQKLTVRIESMLDLAQGAMESLRRILSDLRPGVLDHL 231 Query: 374 TLEQAIRSLMREMELEGRGIVS-HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 L A+ L+ E + + + ++ LS+ L+R+ QE LNN+ KH+ AS Sbjct: 232 GLWAAVEHLLGEFSQRTKVVSVLDIAPELEHVRLSKATETALYRILQEALNNVSKHSGAS 291 Query: 433 AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTR 490 V + + ++ ++D+G G+ + GFGL G+ ER +G I G Sbjct: 292 KVEVTVNTEGRAVVFQVKDNGRGMAVRTFNAGFGLMGIEERAWDIGARCTIDSILGQGVC 351 Query: 491 VSVSLP 496 + + LP Sbjct: 352 IKLRLP 357 >UniRef50_D2BHE9 Sensor histidine kinase n=5 Tax=Dehalococcoides RepID=D2BHE9_DEHSV Length = 381 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 85/393 (21%), Positives = 149/393 (37%), Gaps = 38/393 (9%) Query: 117 AALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVS 176 + ++ LP L+ W +LL G P L F + +++L L V Sbjct: 4 VFSFFYSQIRRLPRLFANVHIWILILLFTGGFFLHYPQLLPFIGQIEPDSFLYLTRHSVG 63 Query: 177 QPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL 236 + + LL + + P LS + +P I + + Sbjct: 64 R---------LIMLLPVTYTALVFGLRPGLLSLVLAIAIIIPNIFVTDTVTPDDIIEIIG 114 Query: 237 MNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAER 296 + I L+ + + D ++ + LQ+ + ++ Sbjct: 115 IIIIGLVVNLWLESYETDKKHR-----------QQAYLKMETAQRELQRMQQNLRFYLKQ 163 Query: 297 LLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQ----SGQLIEQLSL 352 + +E RR +A+ELHDD Q + I + R N ++ + + ++ Sbjct: 164 ITIAQEDERRRIAQELHDDTAQDLIVIS---RAIDRFVTQNPNLGEDNLAELEELQNHVN 220 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 VRR LRP LDDL L A+ L+ ++ + GI ++ + + + Sbjct: 221 RTLSEVRRFAQDLRPSVLDDLGLIPALEWLIPDLS-KHFGINIDIDVNGEIRRFAPETEL 279 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-------PPGSGQQGF 465 LFR+ QE L N+ KHA A+ + + L I+D+G G + + Sbjct: 280 VLFRIVQESLRNVGKHAQATKAWVYIDFGKYKATLTIKDNGRGFLLPERVGDLAALGK-L 338 Query: 466 GLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 GLTGM+ER +GG L I GT V+V++P Sbjct: 339 GLTGMQERAQLIGGRLSIQSKPEVGTMVTVAVP 371 >UniRef50_D1UN54 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UN54_9BURK Length = 610 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 8/235 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L A + + Q L+ + L+ L E R+ +A E+HD++GQ +TA++ Sbjct: 369 LQAEVAERKRTEQELRASREELRELSWHLEVIREEERKRIALEVHDELGQLLTALKIDIS 428 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++Q A N + + +L VR + LRP L + L A+ L ++ Sbjct: 429 LLQMRLAGNPEAQGKTDAMRELIERTMWMVRNVANHLRPAAL-NFGLVSALEWLAQDFNA 487 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I + DE L + + +FR+ QE L N+ +HA AS V L + + L Sbjct: 488 RYY-IQCTVVTHGDEPVLEDARATAIFRIAQESLTNVARHARASHVVLTLRSGEGFIDLE 546 Query: 449 IEDDGSGLPPGSG----QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 I DDG G + + +GL GM ER +GG L I+ GT V++ +P Sbjct: 547 IRDDGCGFDRDAVSARQRGSYGLLGMAERARLIGGALTITSGASTGTVVALRIPL 601 >UniRef50_UPI00016AFAA4 response regulator/sensory box histidine kinase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA4 Length = 672 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 8/241 (3%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 + + A I + ++L+ + L+ + + E +ARELHDD GQ +TA++ Sbjct: 427 ISVVADIAERKRAEEALRISREELRRLSAHIQKIREEEMARIARELHDDFGQQLTALKMA 486 Query: 327 AGIVQRLAADNAS---VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 +++ + I L + ++VRR LRP LDDL L AI L+ Sbjct: 487 VTLLEHKKPAGPERLISRNDLSSIYALIDQLINSVRRFAADLRPAMLDDLGLIPAIDWLI 546 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 E + + RV +FR+ QE L N+ +H+ A+ V + + D Sbjct: 547 EEFSARYH-VHVTRHIDAQAIHFNRESRVGVFRIVQEALTNVARHSAATEVVIDITRDDS 605 Query: 444 RLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRY 499 ++ I D+G G G++ FGL GMRER LGG I G ++V+LP Sbjct: 606 HCIVRIADNGRGAVRDSSLGRRSFGLLGMRERAALLGGDTQIRTSPGAGFVLTVTLPLAA 665 Query: 500 V 500 V Sbjct: 666 V 666 >UniRef50_UPI0001693FB4 two-component sensor histidine kinase of nitrate reduction n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693FB4 Length = 386 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 6/234 (2%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G + G++++ + + Q+++A + + +L+ +E+ R+ ++RELHD IGQ + + Sbjct: 149 GPMFILGVRKVGDERKEEQEKIA--KMITRSILQAQENERKRISRELHDGIGQQLYIMMI 206 Query: 326 QAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 G+++ A S+ +E+ + + VR L LRP LDD+ L A+R+ +++ Sbjct: 207 HLGMIKAEAEGQDSIINPLGELEESTRLLIQDVRHLSAELRPSTLDDIGLVAALRNYIQD 266 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 GI H + + L+R+CQE L N K+A + + ++ ++ Sbjct: 267 YS-HKFGIQVHFAYEGSKERFPAPVETALYRICQEALINAAKYAQTENIHILLDREPDQA 325 Query: 446 MLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 L ++D G G G +G GL M ER LGG++ I+ GT++ V +P Sbjct: 326 RLSVQDFGVGFELKPGTARGVGLYSMEERAGILGGSVTITSQKTKGTKIEVRIP 379 >UniRef50_C9RTT5 PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Geobacillus RepID=C9RTT5_GEOSY Length = 339 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 4/270 (1%) Query: 232 LIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQ 291 LI+T L T+ H +D+ +S + + + + ++E+ ++ Sbjct: 63 LISTEEVPYFLSEMPTYHGHLIDVEMSTALILEQDGAKYYLLVLRDQTVKKKEEEVLHSK 122 Query: 292 HLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLS 351 + ++L E +E + +A+ELHD +GQ++ +I + + D + + + + Sbjct: 123 WMVKKLTEAKEEEHKRLAQELHDGVGQSLYSISIALDNIIQRIQD-EKLHAYVKEVREEL 181 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 V + V+ +LRP+ LD L L I+SL+ + + + L+ + + LS Sbjct: 182 GRVMEDVKLYAQQLRPKSLDALGLIPTIQSLIHSFQSKMPNMSFSLQTNV-YTRLSPTVE 240 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMR 471 + L+RV QE L+N++KHA A+ V + + + L + I+D+G G ++G GL ++ Sbjct: 241 INLYRVIQEALHNVMKHAKATEVCITIERVGQELHVSIKDNGVGFEVEEKREGLGLKHIQ 300 Query: 472 ERVTALGGTLHISCLH--GTRVSVSLPQRY 499 ER++ LGG I+ GT + V +P Sbjct: 301 ERISHLGGETIITSAPMKGTTIFVCVPIEG 330 >UniRef50_Q13H12 PAS/PAC sensor signal transduction histidine kinase n=5 Tax=Burkholderia RepID=Q13H12_BURXL Length = 384 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%) Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 ++ +++ +G L G Q+ E + + LA + T E + +ARELHDD Sbjct: 114 VVVSAIRTASGELCGFAKVTQDLTEQNRLAEFEQLRRLATHIQATREEEQIRIARELHDD 173 Query: 316 IGQTITAIRTQAGIVQRLAADNASVKQ----SGQLIEQLSLGVYDAVRRLLGRLRPRQLD 371 +GQ + A++ ++ + DN ++ + + L ++RR+ LRP L+ Sbjct: 174 LGQQLAALKMALADLETILRDNGAIAALTLTHTKDMHHLIDVTVASLRRIAAGLRPIVLE 233 Query: 372 DLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA 431 L L A+ L+ + I + + D+ +SE LF + QE L N+ +HA A Sbjct: 234 TLGLVPALEWLIGDFTQRYH-IDVNARIQTDDMNVSEAASEALFHIIQEALTNVARHAHA 292 Query: 432 SAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHISCLH-- 487 VT++ + +L +ED+G G+ + + FGL GMRERV L G+L I Sbjct: 293 DEVTVELARGGRTCVLRVEDNGQGMASATLPRETSFGLLGMRERVHRLNGSLSIDSTPGC 352 Query: 488 GTRVSVSLPQR 498 G R++++ P Sbjct: 353 GFRIAITFPLE 363 >UniRef50_Q2Y9N2 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N2_NITMU Length = 692 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 12/259 (4%) Query: 250 DHPVDLLLSLLVQSLTGLLLGAGIQRLREL-----NQSLQKELARNQHLAERLLETEESV 304 D L + + G LG ++ + Q L+ A + A L E Sbjct: 395 DRFFLLPEEQNLIDVIGDDLGRWLEHQQTEARVLVEQELRVRDAAIREFAAHLERMREED 454 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADN-ASVKQSGQLIEQLSLGVYDAVRRLLG 363 R+ +ARE+HD++GQ + A+ + +++ ++ + +L +V + Sbjct: 455 RKYIAREIHDELGQLLAALHLEISLLRSAKDHGSERLETIRHNMAELVEKAGQSVHNVAE 514 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP L L +E A+ L E + GI L + L E+Q V +FR+ QE L Sbjct: 515 HLRPASL-GLGIESALTKLTSEF-KKHTGIYCDLRLPEEPVNLDEDQTVAIFRIVQESLT 572 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTL 481 N+ +H+ A+ V ++ +++ + +++ I D+G G P S ++G FGL GMRER AL G + Sbjct: 573 NVTRHSGANRVEIRLFREKDEVIVEICDNGRGFDPESAKKGKSFGLVGMRERAAALRGYI 632 Query: 482 HISCLH--GTRVSVSLPQR 498 I+ G V VS+P R Sbjct: 633 AITSGPGQGALVRVSIPLR 651 >UniRef50_B2AKD3 Putative multi-sensor signal transduction histidine kinase n=1 Tax=Cupriavidus taiwanensis RepID=B2AKD3_CUPTR Length = 608 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 6/231 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + + L R Q L E R+ +A E+HD++GQ +TA++ Sbjct: 370 LELEVSERKWTELELLASRERLQQLHAHQEAIREEERKCIAMEIHDELGQLLTALKMDLS 429 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++ + V Q + + +L VR ++ LRP L + L A+ L + Sbjct: 430 LLSMQLPTGSGVIQKAEEMRELIEQTIRIVRNVVSHLRPTAL-NYGLASALEWLAADFS- 487 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I + E L + + +FR+ QE L N+ +HA AS V + D + ++ Sbjct: 488 RHTKIPCRFQSTHPEPNLPDPRATAIFRIVQESLTNVARHAKASQVDVTLANTDAGIEVI 547 Query: 449 IEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 I D+G G S + G +GL GM ER +G L + GT + + L Sbjct: 548 IRDNGQGFNVVSARAGYSYGLHGMAERARLIGAQLEVHSKPDRGTLIRLRL 598 >UniRef50_Q5NZX5 Putative sensory protein, two-component system n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZX5_AZOSE Length = 498 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 15/278 (5%) Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 + W G L A + T R ++L G++L A R E + L+ Sbjct: 226 RWSWAGRLCAGTHAERWISLQATPRLMDAGMVLW------DGIMLDATDARRNE--EKLR 277 Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 + + L R+ E + +ARE+HD++GQ +T ++ ++ ++ Sbjct: 278 QSEEFLRDLCVRVGMIREEEKSAIAREIHDELGQLLTVLKMDLSCMREAGGLDSRSVAKM 337 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE- 403 +E L+ + VR + LRP+ LD L L AI L +E IV L DE Sbjct: 338 LRMESLTDDILYRVRDIASTLRPKVLD-LGLAPAIEWLAQEFSS-HTRIVCRLSINGDEL 395 Query: 404 -SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 L +FR+ QE L N +HA A + + ++ + L L+I DDG G P + Sbjct: 396 CGNLDSTAITAIFRIVQESLTNAARHARAKHIDISLTRRGQFLQLLIRDDGVGFDPDALP 455 Query: 463 -QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 GL+G+RER LG L I GT + V +P Sbjct: 456 ICCNGLSGIRERAVILGAELRIDSSAHTGTTLEVLIPH 493 >UniRef50_A5FQU4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU4_DEHSB Length = 363 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 6/231 (2%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 I LR++ +L++ R + L+ L++ E R+ +A+E+HD +GQ +T ++ Sbjct: 127 DISHLRDIELALRESNKRLKELSNHLVQARELERKALAQEIHDQLGQALTGFNIDVSLII 186 Query: 332 RLAAD-NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + + + + + +S + + V+R+ LR + LDD+ L ++ L + + Sbjct: 187 KRSKNLDPEIYKSAMCLSEKIQLTIQDVKRIATELRSQILDDMGLVASLEWLSEDFQ-RR 245 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI E + V LFR+CQE L NI++H+ A+ V ++ + ++L+ I+ Sbjct: 246 TGIKCWTEIHPKDLKTDPILSVNLFRICQEALTNIIRHSHATTVVIRLYMTPDQLIFQIK 305 Query: 451 DDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 D+G G+ FG+ G++ERV LGG L I GT + + LP Sbjct: 306 DNGIGINMKLIDKNDSFGILGIKERVCMLGGRLKIKGVLNVGTSIVILLPL 356 >UniRef50_A6SWF1 Sensory box histidine kinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF1_JANMA Length = 626 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 15/282 (5%) Query: 228 WQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQ---------SLTGLLLGAGIQRLRE 278 ++ L + + S W ++ + + + L + I + E Sbjct: 344 YRAILRSVMTTGQPAEVSGRWTRPDGGIVFFAVHAVAEFDSKGEAESVLAISRNITSIIE 403 Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 L++ + LA+R + E R+ +ARELHDD+ Q ++A+R +++ + Sbjct: 404 AENQLRQSQKLLRQLADRSETSIEDERKHIARELHDDLAQHLSALRMNVSVMKLEFGHLS 463 Query: 339 SV-KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 S + + + R ++ LRP LD + + QA+ L+++ + I L Sbjct: 464 SAFSGQAETMIERLDATIKIARNVITALRPTALD-MGIVQALEWLVKDFST-HKEISCRL 521 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + LS+ +FR+ QE L NI +HA+A V + +D +L I DDG G Sbjct: 522 HIHDENLILSDRSATAIFRIAQESLRNISRHAEACNVDVNLSHKDGMCLLAIRDDGRGFN 581 Query: 458 PGSGQ-QGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 + FGL G++ERV LGG + I GT + V++P Sbjct: 582 TTNVPFNSFGLMGIKERVLILGGKVEIESEEGQGTTIRVNIP 623 >UniRef50_C0N6J6 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6J6_9GAMM Length = 479 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 80/247 (32%), Positives = 128/247 (51%), Gaps = 5/247 (2%) Query: 257 LSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 + V + L R + L K +A N LA +L +ES RRD+ARELHD++ Sbjct: 198 FTARVDTTAVKELNPIQIRFNHMASVLDKTMAENHALAGNMLSLQESERRDLARELHDEL 257 Query: 317 GQTITAIRTQAGIVQRLAADNA--SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 + IR G ++RLA + ++ ++ ++ + VR++L RLRP LDDL Sbjct: 258 APCLFGIRVDLGEIERLAGERQITEIEDKVGSVKTITTHIQSLVRKMLSRLRPMTLDDLG 317 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 L +A+R ++ I ++ D L + +VT++RV QE N V+HA AS V Sbjct: 318 LAEALRDMLHNWRDRQPEIDWEWDFVGDFYDLPDTLQVTVYRVVQECTTNCVRHAKASHV 377 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVS 494 ++ +++E + + + DDG GL + +GFGL GMRERV+ALGG + G + V Sbjct: 378 KVEVRREEETIKVAVTDDGKGLD-ANLVRGFGLIGMRERVSALGGRIAFDTEEGLGLQVR 436 Query: 495 --LPQRY 499 +P + Sbjct: 437 VLIPLKG 443 >UniRef50_A6WW19 Integral membrane sensor signal transduction histidine kinase n=46 Tax=Rhizobiales RepID=A6WW19_OCHA4 Length = 485 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 117/271 (43%), Gaps = 13/271 (4%) Query: 231 ALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARN 290 + T A+ V L+ V + + ++ R + L Sbjct: 210 VYVQTAAANADFRANIRTTFLIVSLIAVPAVMLVFATCMLLNLRERRMADNKL------- 262 Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA-DNASVKQSGQLIEQ 349 + LA+R+++T+E R +ARELHD I Q + +R + R D+ + + Sbjct: 263 KELAQRIIDTQEEERARLARELHDGISQNLVGVRYAIDLASRQVRMDSGGAPLAIEKASD 322 Query: 350 LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSEN 409 G VRRL LRPR LDDL L A+++L GI + LE L Sbjct: 323 ALNGAIKEVRRLSHDLRPRILDDLGLTVALKALCEHFSER-TGIETQLEASGLNETLKPE 381 Query: 410 QRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL---PPGSGQQGFG 466 L+RV QE L N+ +H+ AS V+++ W ++ + + DDG+G G G Sbjct: 382 ASTALYRVVQEALTNVERHSGASQVSIRLWGSGGKVTMTVADDGNGFTARDLKDQLSGLG 441 Query: 467 LTGMRERVTALGGTLHISC-LHGTRVSVSLP 496 L M+ER+ GG L + GT+++ LP Sbjct: 442 LRNMQERMAHFGGVLLVETGADGTQLTARLP 472 >UniRef50_Q67QY8 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY8_SYMTH Length = 346 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 82/339 (24%), Positives = 142/339 (41%), Gaps = 20/339 (5%) Query: 175 VSQPINWRGRHLVWYLLLFVISLWLQLGLPDELS----RFTPFCLALPIIALAWHYGWQG 230 + + + LV + VI + + + L + L G Sbjct: 7 LHSRTSLFTKVLVANAAIAVIGATCAVLIATHFWNSQEHAPIWEFGLIAVGLVVSLGVNY 66 Query: 231 ALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARN 290 AL+ + + + R D S V + G A + + L L + Sbjct: 67 ALLRVAFRPLFTLHATLDRVRRGD--FSARVPMVPGDPDIARVSEMANLM--LDRLAEHR 122 Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA---ADNASVKQSGQLI 347 Q +A ++L +E R+ +ARELHD+ Q++T+I ++R A + ++ + L Sbjct: 123 QAVAAQILRAQEEERKRIARELHDETAQSLTSIVVNLEAIERQAVGSGVDEALCERLHLT 182 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 ++++ D RRL+ LRP LDDL L A+R + + G+ + + L Sbjct: 183 KEVAQRTLDETRRLMMDLRPSVLDDLGLVPALRWFINH-RVLPAGLEADFQVSGLTERLP 241 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP------GSG 461 E LFR+ QE + N+VKHA A V ++ ++ + ++ DDG G Sbjct: 242 EELETALFRIMQEAITNVVKHAKAKTVLVRLHREHGEITGLVVDDGQGFHVVHTVGQPVR 301 Query: 462 QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 +G GL GM+ER +GG + + GT V V++P R Sbjct: 302 DRGLGLFGMQERAALVGGKVVVESAPGRGTTVRVTVPDR 340 >UniRef50_A0LN82 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LN82_SYNFM Length = 394 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 8/236 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + I+ + Q L++ ++ + L+ +L+ T+E R+ +A E+HD IG T+TAI+ Sbjct: 157 LQSEIEERKRTEQKLRRSESQLRFLSSQLIRTQEEERKRIALEVHDSIGSTLTAIKFSLE 216 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 + A D +V ++ + + + R+++ LRP LDDL + + R+ + Sbjct: 217 HIVSEAKDAPAVCEALKTPISFTQIAIEESRKIMNDLRPAVLDDLGISATVGWFCRQFQS 276 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I +E + E ++ +FR+ QE +NI KH+ A V + + L L Sbjct: 277 IHPAIRIERRVEANEEEIPEPLKIVVFRIMQEAFHNISKHSRADLVRVSLTVKGGALRLT 336 Query: 449 IEDDGSGLPPGSGQ------QGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 IED+G G + + + GLT M+ER GG+ + GT V P Sbjct: 337 IEDNGVGFNVKALRRKEGQIRRLGLTSMKERTELSGGSFTLKSRTGGGTTVEAFWP 392 >UniRef50_A0NNP2 Signal transduction histidine kinase n=2 Tax=Labrenzia RepID=A0NNP2_9RHOB Length = 453 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 9/287 (3%) Query: 217 LPIIALAWHYGW---QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGI 273 L L +GW G + + I + R L ++ ++ ++ G I Sbjct: 162 LGYAILLEKWGWMLGTGLYTDDIAREVTAIRTDFARSIRQTLFVTFMITLAAIVIAGFLI 221 Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL 333 +R Q + + L R+ + +E R+ V+ ELHD I Q + ++R ++ Sbjct: 222 AGVRFSEQRFADS--KLKELTNRIFQVQEQERKRVSTELHDSISQLLVSVRYGVEMIHSE 279 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 A ++ + G VRR+ LRP LDD+ L A+ SL +E + + GI Sbjct: 280 ANREPELQAQAAKCLKTLDGTIAEVRRISRDLRPSVLDDMGLAAALGSLGKEFQNQ-SGI 338 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 +++ S LSE + L+RV QE + N+ +H+ AS V + ++L+L +ED+G Sbjct: 339 TVNVQAEQCHSRLSEGAKTALYRVVQECMTNVARHSHASEVAISLKVGVQQLVLSVEDNG 398 Query: 454 SGLP-PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 GLP P G G MRER+ GG L +S GTR+ V +P Sbjct: 399 VGLPRPLPKSGGLGFRNMRERIETYGGRLTLSRRASGGTRIKVQMPL 445 >UniRef50_C0N6H4 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H4_9GAMM Length = 570 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 137/262 (52%), Gaps = 14/262 (5%) Query: 250 DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARN-----QHLAERLLETEESV 304 VDLLLS + S + I LR++ + Q E ARN + LA+ + E +E+ Sbjct: 303 GSQVDLLLSTVPLSDNEDRVIGLICTLRDITELKQAEAARNQLRETRLLAKHMDEAQEAE 362 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 RR +ARELHD++GQ +TAI+T A +++ R V S Q I + +YD V ++ Sbjct: 363 RRHLARELHDELGQCLTAIKTDAVLIRNRTETTEPRVFNSAQAIIDTASHIYDVVHNMIT 422 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 RLRP LDDL L + + + I L+ + L+E +T+FRV QE + Sbjct: 423 RLRPSPLDDLGLVPTLEQCIASWQSRETTINFQLDVNGTLNNLNEIMNMTVFRVVQEAIT 482 Query: 424 NIVKHADASAVTLQGWQ----QDERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTAL 477 N V+HADAS + ++ +D++L++ I+D+G G+ FGL GMRER +L Sbjct: 483 NAVRHADASEIKVKVSAEQGSEDDKLIIDIQDNGKGMVVKDFHSDVDFGLLGMRERAQSL 542 Query: 478 GGTLHISCLHGTRVS--VSLPQ 497 GG ++ G V +++P Sbjct: 543 GGKFELNSEPGAGVRILITIPL 564 >UniRef50_A4J6C1 Histidine kinase n=2 Tax=Peptococcaceae RepID=A4J6C1_DESRM Length = 379 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 10/245 (4%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + S G+ L + L +++ L Q L ++ +E R+ VARE+HD Q++ Sbjct: 135 LVSQVGVALQYLSKDLSGVSEKLTNLH-DMQQLGISIIRAQEEERKRVAREIHDGPAQSM 193 Query: 321 TAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 I +A +L + + V ++QL VR+++ LRP LDDL L A+ Sbjct: 194 ANIVMRAEFCLKLLEMNPSMVGNELVSLQQLVRQSLQDVRKIIFDLRPMVLDDLGLIPAV 253 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 + + + +++ I + + E + V +FR+ QE L NI KHA A V ++ Sbjct: 254 KRYLEDYKVQN-NISADFVFIGKEQRFDASMEVAVFRIIQEALINIKKHAAARHVLIKME 312 Query: 440 QQDERLMLVIEDDGSGL-----PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVS 492 R+ + I+DDG G P G+GL GMRER+ L GTL I+ GT ++ Sbjct: 313 LISSRINVYIKDDGCGFVVGHIKPRGDGSGYGLLGMRERIQLLKGTLSINSTPGKGTELN 372 Query: 493 VSLPQ 497 SLP Sbjct: 373 FSLPL 377 >UniRef50_A3NKQ6 Signal transduction histidine kinase n=29 Tax=Burkholderia RepID=A3NKQ6_BURP6 Length = 492 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 7/232 (3%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 + + +L+ + L+ + E + +ARELHDD+GQ +TA++ +V Sbjct: 253 DVTDRKRDEDALRVSREELRRLSAHIQSIREEEKTRIARELHDDLGQQLTALKMAVTLVD 312 Query: 332 RLAADNASVKQ--SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 D + + L + D+VRR+ LRP LDDL L AI L E Sbjct: 313 NELKDAGWASRTSRLPNVYALIGQLLDSVRRIAADLRPVMLDDLGLMAAIEWLTHEFVER 372 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 R I D+ A + +FR+ QE L N+ +H++A+ VTL + + ++ I Sbjct: 373 YR-IPVTSRIEADDIAFTRGSATEVFRIVQEALTNVARHSEATEVTLDIIRDEPNCIVRI 431 Query: 450 EDDGSGL--PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 D+G G + GL GMRER LGG + I G ++ +LP Sbjct: 432 ADNGCGTARDTRPNRHSLGLLGMRERAARLGGEIRIDTAPGRGFALTATLPL 483 >UniRef50_A6TSW3 Histidine kinase n=2 Tax=Alkaliphilus RepID=A6TSW3_ALKMQ Length = 392 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 120/244 (49%), Gaps = 11/244 (4%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + G+ L L++++ +L+ + Q L R++ +E R VARE+HD Q++ Sbjct: 143 LAFKIGIALDFLSGNLQDISHTLED-MQEKQFLGRRIIRVQEEERHRVAREIHDGPAQSL 201 Query: 321 TAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 + +A I ++L D ++ Q ++++ +R+++ LRP LDD+ L + Sbjct: 202 ANVVIKAEICEKLMDIDLEKSREEIQNLKKILRDGIKDIRKIIYNLRPMSLDDIGLIPTL 261 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 + + E E I L ++ + +++FR+ QE LNN+ KHA A+ + ++ Sbjct: 262 KRYVETFEEE-TQINMILNILSEDPIKDSIKNLSIFRIIQEALNNVRKHARATNINIKIE 320 Query: 440 QQDERLMLVIEDDGSGLP------PGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRV 491 + L ++D+G G P + + GFGL M+ERV L G ++I GT++ Sbjct: 321 ITQTDIRLHVQDNGIGFDTENIKVPQNYEGGFGLLNMKERVGLLDGKINIKSKINQGTKL 380 Query: 492 SVSL 495 + + Sbjct: 381 MIYI 384 >UniRef50_C5UZV3 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV3_9PROT Length = 401 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 11/241 (4%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L I + ++ L + + L+ + +E R +ARE+HD+IG +TA++ Sbjct: 160 LVVNITQNKQAEIELVHSRQQLRELSSHIENIKEEERTRIAREIHDEIGVLLTALKMDLA 219 Query: 329 IVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++ R +D+ ++++ Q++ L A L+ LRP LD + AI E Sbjct: 220 WMRQRFPSDDGALQEKSQVMANLLDTAGIAANNLVHSLRPGSLDCFGIVAAIEIEATEFT 279 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ-----D 442 + D +S+ Q +TLFRV QE LNNI+KHA A V ++ Q D Sbjct: 280 KR-TATPCKIIKSSDNLDVSDEQSITLFRVFQETLNNIMKHAQARRVQVKISQSATDQID 338 Query: 443 ERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 + + L++ DDG G + + FGL G++ER+ L GTL I+ GT+++V LP+ Sbjct: 339 KYVELIVSDDGCGFDEAARNKPRSFGLRGIQERIRQLDGTLSITSRPGKGTKIAVRLPKN 398 Query: 499 Y 499 Sbjct: 399 G 399 >UniRef50_Q0AF09 Multi-sensor signal transduction histidine kinase n=3 Tax=Nitrosomonas RepID=Q0AF09_NITEC Length = 498 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 128/277 (46%), Gaps = 16/277 (5%) Query: 226 YGWQGALIA-TLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 + W+G + A + + T R P +L G++L I R +++ + Sbjct: 217 WNWEGRIQARGDADVKWISLRATPRRTPRGAVLW------DGIMLN--ITRNKQIELEIA 268 Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQS 343 + A+ + L+ + +E R +ARE+HDDIG T+TAI+ + + + + Sbjct: 269 RSRAQLEELSAYSQKAKEQERTRIAREIHDDIGGTLTAIKCELVPCLDNSSRAPEFYRNK 328 Query: 344 GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 +E L V D+ RR+ LRP LD + A++ RE GI + +E Sbjct: 329 AAAVESLVDMVIDSTRRIALDLRPGVLD-CGIVAAVQWQAREFNQR-TGIACAVVCDDEE 386 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL--PPGSG 461 +L + V +FRV QE L NI KHADAS V ++ + + L + D+G G+ P Sbjct: 387 ISLDGDLAVAIFRVFQEALTNIAKHADASEVRVKLSEASGEVYLEVADNGCGITYPDMEK 446 Query: 462 QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 FG+ MRER LGG HI GT V + +P Sbjct: 447 VNSFGIRSMRERCQQLGGRFHIQGEPQTGTGVMIWIP 483 >UniRef50_B0P062 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P062_9CLOT Length = 440 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 84/400 (21%), Positives = 175/400 (43%), Gaps = 20/400 (5%) Query: 103 YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYL 162 Y + +L A + + ++ + +L L L I V+ +Y Sbjct: 52 YLPNEPVTSTVLIFIAFFLLLGIIEIRRKQRKRQQVSVILYAAEILLCLIIIKFVYVNY- 110 Query: 163 ANNTWLPLGPSLVS--QPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPII 220 N L + +V+ + + RG V ++++ S + + + ++ F F P Sbjct: 111 -NGIILLVIADIVTDIKDKHTRGIFFVIMGMIYLFSDYDIISMFIDMISFQQFLSVYPAK 169 Query: 221 ALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELN 280 G + L+A +NAIA IA +++ + Q +G +L+ N Sbjct: 170 VSMMIQGTRNILVA--LNAIAFIAY---------MIILMRNQMKENARIGLLNLQLQTAN 218 Query: 281 QSLQKELARNQHLAERLLETEE-SVRRDVARELHDDIGQTITAIRTQAGI-VQRLAADNA 338 L++ + + +E + E R +ARE+HD +G T+T + + + Sbjct: 219 IRLKEMNEQLKDYSEMTEKMAETRERNRIAREIHDTLGHTMTGLSAGIDACIAMIDFSVD 278 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 + K+ I Q++ +RR + +LRP L+ L++A+ ++ E ++ + + + Sbjct: 279 ATKEQLNKISQVARQGIKDIRRSVNKLRPDALEHSGLQEALEKMINE-TMQVSDVKINYD 337 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 +++ ++++ ++RV QE + N ++H A + + W++D+ L L I+D+G G Sbjct: 338 CQVEVLKFNQDEEDMIYRVVQESITNAIRHGKAKQIDVNLWKEDKWLNLEIKDNGIGC-- 395 Query: 459 GSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQR 498 GFGL + ER+ L GT+ +G +V+ +P R Sbjct: 396 EEIHTGFGLIHIEERIKMLKGTVEYDGSNGFKVTARIPIR 435 >UniRef50_A9WAP8 ATP-binding region ATPase domain protein n=3 Tax=Chloroflexus RepID=A9WAP8_CHLAA Length = 491 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 7/235 (2%) Query: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 A + L + + + +++ +E R+ +ARELHD Q +T++ Sbjct: 245 AFNAMSEALAQAERERAEREHLRAQYVTQIITAQEEERKRIARELHDSTSQALTSLLVGL 304 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + + Q + + + + + L +LRP LDDL L A++ + E Sbjct: 305 RSLADRHRSPE-IAQQVDDLRSIVGQILNDLHALARQLRPSVLDDLGLAAALQRYVAECR 363 Query: 388 LEGRGIVSHLEWRI-DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 G++ L D+ L L+R+ QEGL NI++HA AS ++ ++ +R+ Sbjct: 364 AR-SGLIIDLALPGLDDFRLDPVVETALYRIVQEGLTNIIRHAHASTASVVIERRADRVR 422 Query: 447 LVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +IEDDG G P + G GL G+RER L G L I GT + V +P Sbjct: 423 AIIEDDGCGFDPNALHGDGHLGLNGIRERAALLNGQLIIESSPGSGTTLYVEIPL 477 >UniRef50_Q24Z69 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Z69_DESHY Length = 269 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 5/215 (2%) Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 K A L++ +E + ++RELHD +GQ +T++ + +Q V Sbjct: 50 KSRADQDAALRALIQLQELENKRISRELHDSVGQALTSLLLRIRAIQNKEEATE-VFDQL 108 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 + + L+ + VRR+ LRP L++L L AI + + + GI + Sbjct: 109 EELYHLTTETMEEVRRISLNLRPLALENLGLVDAIYWYVENFQ-KNTGIEVVFRSSASKR 167 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG 464 L + +T++R+ QE L N+ KHA A V + ER+++ I DDG G+ +G Sbjct: 168 TLPKEIELTIYRIVQEALTNVSKHAQAQHVAITIG-GSERVLMSIRDDGKGIDRAKKTEG 226 Query: 465 FGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 GL GM ERV LGGTL I GT + V +P Sbjct: 227 LGLLGMSERVRLLGGTLSIQGGEAEGTSILVEIPL 261 >UniRef50_O32198 Sensor histidine kinase liaS n=5 Tax=Bacillus RepID=LIAS_BACSU Length = 360 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 72/347 (20%), Positives = 143/347 (41%), Gaps = 31/347 (8%) Query: 175 VSQPINWRG-RHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALI 233 + + WR R LL + L + L + + LI Sbjct: 5 MLASLQWRAIRMTTGISLLLFVCLISFMMFYYRLDPLVLLSSS----WFGIPFILILLLI 60 Query: 234 ATLMNAIALIASQTWRDHPVDLLLSLLVQSLTG-----------LLLGAGIQRLRELNQS 282 + + + +D L+ ++ G +G +L E+ + Sbjct: 61 SVTVGFASGYMYGNRLKTRIDTLIESILTFENGNFAYRIPPLGDDEIGLAADQLNEMAKR 120 Query: 283 LQKELARNQHLAERLLETEE--------SVRRDVARELHDDIGQTITAIRTQAGI-VQRL 333 ++ ++A Q L+ E + R+ +AR+LHD + Q + AI ++ + Sbjct: 121 VELQVASLQKLSNERAEWQAQMKKSVISEERQRLARDLHDAVSQQLFAISMMTSAVLEHV 180 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 + + +++E ++ + +R LL LRP L+ L++ + L+ E + Sbjct: 181 KDADDKTVKRIRMVEHMAGEAQNEMRALLLHLRPVTLEGKGLKEGLTELLDEFRKKQ--- 237 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 +EW I ++A+S+ LFR+ QE L+N+ +H+ AS VT+ ++ +L L + D+G Sbjct: 238 PIDIEWDIQDTAISKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKNSQLRLKVIDNG 297 Query: 454 SGLPPGSGQQ-GFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 G + +GL M+ER + +GG + GT++ V +P Sbjct: 298 KGFKMDQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVPI 344 >UniRef50_Q023R2 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R2_SOLUE Length = 838 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 8/257 (3%) Query: 248 WRDHPVDLLLSLLVQSL--TGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVR 305 + P+++ LS + S + + I + ++ +LQ+ + + LA L+ +E R Sbjct: 578 GTEFPIEVSLSSVQTSEGTLSVAFVSDITKRKQAEAALQRSESELRALARSLITAQEDER 637 Query: 306 RDVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGR 364 R VAR+LHDD+ Q + + + G + + +++ + + + + VRRL Sbjct: 638 RRVARDLHDDVTQRLALLSIEIGKLATETSGSVEEIRKRLRYFQSQARLASNEVRRLSHG 697 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 L P ++D L A+ +E +GI + + ++ LS L+RV QE L N Sbjct: 698 LHPSVIEDFGLSTALEDFCQEF-ARAQGITLIFDALVADAVLSAGDASCLYRVAQECLRN 756 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLH 482 + KH+ A+ V + + + L I+D+GSG G+ + +G GL M+ERV GTL Sbjct: 757 VAKHSGATEVRVGIARDGANVRLTIKDNGSGFHAGADRVNKGLGLVSMKERVKMANGTLL 816 Query: 483 ISCLH--GTRVSVSLPQ 497 I+ GT + S+P Sbjct: 817 ITSQPGQGTEIVASVPL 833 >UniRef50_C4XNR7 Two-component sensor histidine kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR7_DESMR Length = 482 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 11/297 (3%) Query: 211 TPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLG 270 CL ++A Y + A + P D + + + Sbjct: 186 LVVCLLAAVVATRLAYRIVHPIDQLAQAAGQIRQGNYGVRIPPDDQAEVGRLASAFNDMA 245 Query: 271 AGIQRLRELNQ----SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 A + R + N+ +L+ + AR+ L +++L +E R+ ++RELHD+ GQ++ ++ Sbjct: 246 ATLTRKDDENEHLLTALRDKDARHVRLLQKVLSVQEDERKRISRELHDEAGQSLASLLAY 305 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 ++ +S +++ ++ L + + +R++ LRP LDDL L A+ + Sbjct: 306 LQLL-MAGEVTSSQREAIGQLKSLVVEILGGLRKMAVELRPPALDDLGLVPAMAKYVDGF 364 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 L+ + + D L + L+R+ QE L N+ +HA+A AV ++ + + Sbjct: 365 ALQR-DLTAIFAPEDDNPELDPAVALALYRILQESLTNVARHAEAKAVRVELAAEGGDIA 423 Query: 447 LVIEDDGSGLPPGSGQQG---FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 L + DDG G + G G+ GM ER LGGT ++ GT V V+LP+R Sbjct: 424 LTVSDDGRGFDAAALPAGEESLGIYGMMERAELLGGTFQMTSRPGQGTTVRVALPRR 480 >UniRef50_C0Q8Z0 Two-component hybrid sensor and response regulator histidine kinase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q8Z0_DESAH Length = 708 Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 7/229 (3%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 Q++++ L+K + + L+ ++E E R +ARELHD +GQ +TA++ A ++ Sbjct: 475 LEQQVQKRTVELEKVQDKLRKLSGSIMEAHEIERGALARELHDHLGQVLTALKIDAVWIE 534 Query: 332 R-LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 R L+ + I L VR++ RLRP LDDL L +A+ SL + E Sbjct: 535 RFLSPRDPDAAVRAGRISSLIDDTIGDVRKMAFRLRPGVLDDLGLVEALESLTGDFEER- 593 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 I + + L+R+ QE L N ++H+ AS V L +L+L I+ Sbjct: 594 SDITCLFQAA-ALPDIDSTLATALYRIAQEALTNAIRHSRASIVALTLAMDQGKLVLKIK 652 Query: 451 DDGSG--LPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 D+G G + QGFGL GM+ER T GG L I GT V + Sbjct: 653 DNGVGFAFDDINENQGFGLAGMQERATLAGGVLEIVSGPEQGTSVCCFV 701 >UniRef50_Q1H0K4 Multi-sensor signal transduction histidine kinase n=2 Tax=Methylophilaceae RepID=Q1H0K4_METFK Length = 573 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 17/298 (5%) Query: 218 PIIALAWHYGWQGALIATLMNAIALI-------ASQTWRDHPVDLLLSLLVQSLTGLLLG 270 ++ H G Q A M+A L+ ++ + V L ++ L+ +G L+G Sbjct: 273 ALLMPPGHEGEQERSSAASMSANGLVEHYDTQRVARDGKLLDVSLSIAPLMDPKSGELIG 332 Query: 271 AGIQRL----RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 R+L + ++L N+ L + E RR +ARELHD++GQ +TAI+T Sbjct: 333 EICSMRDITERKLAEETARKLEENRQLTHLIQRHIEDERRSLARELHDELGQYVTAIKTF 392 Query: 327 AGIVQRLAADN-ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 A + A S++ S Q I + +YD + ++ LRP LD+L L +A+R + Sbjct: 393 AVAIANKAKQEMPSIESSAQTIVSAANHIYDGMHNIIRHLRPGSLDNLGLSEALRDAVAG 452 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD-ER 444 + + + +LE + L E+ + L+R+ QE + N ++HA A + ++ + + Sbjct: 453 WQAQNSNVTFNLELQGKLDLLGESLNINLYRIVQESVTNALRHAQADRIDIRLSRDENGN 512 Query: 445 LMLVIEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 L L+I+D+G G+ + FGL GMRERV AL G I GT ++V++P+R Sbjct: 513 LTLLIKDNGIGMNMCNVDQNRHFGLLGMRERVQALYGNFAIDSQPGQGTAITVTIPER 570 >UniRef50_C3XBQ9 DNA-binding response regulator n=2 Tax=Oxalobacter formigenes RepID=C3XBQ9_OXAFO Length = 225 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 6/216 (2%) Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASVKQSGQ 345 + L + E R+ +ARE+HD++GQ + A+R + ++++ D + Sbjct: 10 EEELRELIDHQERIREDERKRIAREIHDELGQRLLALRIEVTLLKQETFDSREKRSERID 69 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 + +VR L+ LRP LD L L ++ ++ GI E + Sbjct: 70 EVLGQLDSTVKSVRNLINNLRPAVLD-LGLVASLDWQAKDF-TRRNGIECVFETHDENLE 127 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--Q 463 + + + LFRV QE L NIVKHA AS V+++ D+ L+L I D+G G+P + + Sbjct: 128 VDDERATVLFRVLQEALTNIVKHAKASKVSVKLDGNDDTLVLKISDNGIGMPKVRNRKIK 187 Query: 464 GFGLTGMRERVTALGGTLHISCLH-GTRVSVSLPQR 498 +GL G+RER+ L G I+ GT ++ +P + Sbjct: 188 SYGLAGIRERIGMLNGEFRIATGDTGTTLTFRIPLK 223 >UniRef50_B1YLL4 Histidine kinase n=2 Tax=Exiguobacterium RepID=B1YLL4_EXIS2 Length = 390 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 10/247 (4%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + S ++L ++ +N+ +K + + Q + ++ ++ E+ RR ++R++HD QT+ Sbjct: 138 LISRVSVVLNFLTDDMQVMNEKYEKAMQK-QEMGLKVFQSAENERRRLSRDMHDGPAQTL 196 Query: 321 TAIRTQAGIVQRLAADN--ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQA 378 + +A +++++ N + + + +L +RR++ LRP LDDL Sbjct: 197 AHVLIRADLIEKIHQHNGAEAAFEEIHRLRKLIRDGLADIRRIIYDLRPMTLDDLGFVPT 256 Query: 379 IRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 + +R M+ E I H + + V +FR+ QE + N VKH+ A + + Sbjct: 257 LERYLRHMQ-EISNIPIHFNYLGGGERIESTYEVAVFRIVQEAVQNAVKHSKAVDIRIII 315 Query: 439 WQQDERLMLVIEDDGSGLP----PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVS 492 Q + + ++D+G G S + FGL GMRER+ + G I GT + Sbjct: 316 EQYQHSVRIHVKDNGIGFDFNSIVESCDESFGLIGMRERIELIDGEFEIETQPGKGTVIK 375 Query: 493 VSLPQRY 499 V +P Sbjct: 376 VRIPVEE 382 >UniRef50_C1YIX9 Signal transduction histidine kinase, COG4585 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YIX9_NOCDA Length = 412 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 150/348 (43%), Gaps = 24/348 (6%) Query: 171 GPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQG 230 L+ WR + + F + L L L + F F ++L A+A Sbjct: 60 AWVLLGYTPPWRDGRPLPAGIHFAVLLALASALMAHDTLFMMFTVSLFFRAMALPRRLTL 119 Query: 231 ALIATLMNAI-----ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGI----------QR 275 IA A+ + T R L + + V ++ + +G G+ + Sbjct: 120 VGIAATAVALYTNTMGFPGTDTERPFLEHLFVYVGVITIQTVAVGGGLVIASKAAEQHRE 179 Query: 276 LRELNQSLQKELARNQHLAERLL-ETEE----SVRRDVARELHDDIGQTITAIRTQAGIV 330 R L+ L N L +LL + E R+ +ARE+HD + Q + I TQ Sbjct: 180 RRVTVARLEAALEENAGLHAQLLTQAREAGVLDERQRMAREIHDTLAQGLAGIVTQIQAA 239 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 QR+ D + + L+ RR + LRP QL + L +A+ L R E Sbjct: 240 QRVWEDPGAARPHADRALGLARESLAEARRSVQALRPGQLAESQLPEALGELTRRWAEEH 299 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 G+ L+ + ALS V LFRV QE L N+ +HADAS V + D+ ++L + Sbjct: 300 -GVRPDLDVTGERVALSPAIEVVLFRVAQEALTNVARHADASRVGVTLSYSDDVVLLDVR 358 Query: 451 DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 DDG G+ G Q GFGL+ MR+RV +GG L I GT VS ++P Sbjct: 359 DDGRGI-TGHNQHGFGLSSMRQRVRGIGGALEIESGEGEGTAVSATVP 405 >UniRef50_B1Y742 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y742_LEPCP Length = 384 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 6/233 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + R + +++ AR L + E R +ARE+HD++GQ +T ++ Sbjct: 134 LRHEVAVRRSAERQVRESEARLHALTSHFITMREKERTAIAREIHDELGQVLTVLKMDIA 193 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 + R D+A ++ + +L +VR++ LRP LDD+ L AI E + Sbjct: 194 WLAR-HPDDARLRVKTDAMSRLIDDTIRSVRKISAGLRPEVLDDMGLVSAIAWQTTEFQK 252 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 G+ + ++ TLFR+ QE L N+ +HA A+ + ++ Q +RL+L Sbjct: 253 R-TGVRCRSALPPETEVFDKDLSNTLFRIFQEILTNVARHAHATRLDVELRQAGDRLVLK 311 Query: 449 IEDDGSGLPP--GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + D+G G+ + GL GM ER LGGT+ I GTRV VS+P Sbjct: 312 VADNGVGIVVQEANAPTTLGLLGMHERALRLGGTVAIDGEPGAGTRVRVSIPI 364 >UniRef50_A9B046 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B046_HERA2 Length = 546 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 140/368 (38%), Gaps = 26/368 (7%) Query: 143 LTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLG 202 L G + + + +YL T + + V + R R L ++ + +++ Sbjct: 182 AALAGSDDIDQLTWKYENYLVIATPVRDQANQVIGALYVRSRPLSQNQVIVALLMFVIFI 241 Query: 203 LPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQ 262 + + YGW L+ D LS+ V Sbjct: 242 ASS-------IVSIIANALIGMVYGW----FVARNFVRRLVHLTQATDSLAAGDLSVRVN 290 Query: 263 SLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE--------SVRRDVARELHD 314 + +G +R + Q L+ + + LA+R E R +AR+LHD Sbjct: 291 DGSIDEIGHLARRFDSMAQQLESNVKMLRQLADRNAALVEQAGQLAIVEERNRLARDLHD 350 Query: 315 DIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 + Q + ++ A + L A + + + Q++ R L+ LRP L D Sbjct: 351 SVSQELFSVTMLAAAARNLLPAQPDKARSQVEQLSQMAQRALHETRGLIFALRPAALGDQ 410 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L A+R L E +G+ L + + + L+R+CQE L N+ KH+ ++ Sbjct: 411 GLVPALRQLTEE-AARRQGLQIELNTNGE-RRIPLDHEQALYRICQEALANVTKHSGVNS 468 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGSGQQGF--GLTGMRERVTALGGTLHIS--CLHGT 489 ++ + R L + D G G + GL ++ER A+GGT+ ++ GT Sbjct: 469 ASVSLEYEAHRTTLEVRDRGRGFDQDKPRNSHSLGLISIQERAKAVGGTVELTAAPGQGT 528 Query: 490 RVSVSLPQ 497 + + +P+ Sbjct: 529 SLRIVVPR 536 >UniRef50_A6GSY8 Sensory transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GSY8_9BURK Length = 512 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 6/231 (2%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 I ++ + LQ + + + E R +ARE+HDD+G ++T ++ + Sbjct: 274 LDISDRKQAEERLQNAQTELRLVTTEFEKRREQERGAIAREIHDDMGGSLTKLKADVAWL 333 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + ++++++ + +L + + +R+ LRP LD L A+ M + + Sbjct: 334 NKNLTADSAIQEKLDDMLELIEHLLASSQRIAKDLRPGILD-YGLIPALEWQMNDFQKR- 391 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 I + ++E L Q LFR+ QE L NIVKHA A+ V ++ + + L L I Sbjct: 392 TQIEGTFQCNVEELDLDSEQSTALFRILQEALTNIVKHAQATRVDVELFVTESELTLEIR 451 Query: 451 DDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 D+G G+ + FGL GM+ERV A G + +S GT V VS+P+ Sbjct: 452 DNGRGIENTDKLKETSFGLRGMQERVAAFEGWVDVSGSLGSGTTVMVSIPR 502 >UniRef50_P54663 Sensor protein degS n=33 Tax=Bacillales RepID=DEGS_BREBE Length = 386 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 5/230 (2%) Query: 261 VQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI 320 + ++ LR++ ++L+ + Q ++++ +E RR ++RE+HD Q + Sbjct: 143 LVGQMTVVYNFLTGDLRQVGEALEDAREK-QAFGLQIIQAQEEERRKLSREIHDGPAQMM 201 Query: 321 TAIRTQAGIVQRLAADN--ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQA 378 + ++ +V+R+ D + + + ++ VRR++ LR LDDL L Sbjct: 202 ANVLLRSELVERIYHDKGIDEALKEIRDLRKMVKSSLAEVRRIIYDLRRMALDDLGLIPT 261 Query: 379 IRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQG 438 ++ ++ E E GI + E+ + LFR+ QE L N KHA AS V ++ Sbjct: 262 LKKYVKTFE-EHTGIFVDFKHIGKGERFPEHVEIALFRLVQEALQNTRKHAKASHVHVKI 320 Query: 439 WQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISCLH 487 +Q + +VI+D+G G ++G FGL GM+ERV L G L I Sbjct: 321 EEQKTKFTVVIKDNGKGFDQTEKKEGSFGLVGMKERVNMLKGQLVIRTKP 370 >UniRef50_C3BDP5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3BDP5_BACMY Length = 484 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 130/313 (41%), Gaps = 9/313 (2%) Query: 193 FVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHP 252 ++ + ++L + L +A + + AT ++A L Sbjct: 158 YIFTKIIELVVATFLVCMGAAGIAYYVTRIITRPINSLVDTATGISAGNLSLRAKAESDD 217 Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAREL 312 L+ + L+ + + +L + LQ++ A L +LL E R+ ++REL Sbjct: 218 EVGKLARAFNEMADNLISSS-TAVEKLLKELQEKDALRDTLILKLLSAHEEERKRISREL 276 Query: 313 HDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD 372 HD+ Q +T + I+ D ++ + + + + +R L LRP LDD Sbjct: 277 HDETSQALTFLMVTMRILANEVKDIEQ-QELLNVSRETAASILREIRDLAVELRPPILDD 335 Query: 373 LTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 + L A+R R+ E + V D + + + V L+R+ QE L N+VKH A+ Sbjct: 336 IGLIPALRKHARKFEEKFALTVILHAPDDDIATIDSHTAVALYRIVQESLTNVVKHTVAT 395 Query: 433 AVTLQGWQQDERLMLVIEDDGSG-----LPPGSGQQGFGLTGMRERVTALGGTLHISCL- 486 + + +D + L I D+G G Q G+ GM+ER L G+ I Sbjct: 396 EIVINMEIKDCSIELSIHDNGHGIRETDFEKARQQNRIGIYGMKERAELLDGSFFIKTHN 455 Query: 487 -HGTRVSVSLPQR 498 GT V VS+P + Sbjct: 456 IGGTEVRVSIPLK 468 >UniRef50_C9LVI4 Histidine kinase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVI4_9FIRM Length = 425 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 29/242 (11%) Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQS 343 +E +++ + ++++ +E R V+RELHD Q I + QA I++R+ D K+ Sbjct: 173 EEAQKSKFIGAQIIKAQEEERLRVSRELHDGPAQDIANLIFQASIIERMVDRDPEEAKRG 232 Query: 344 GQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDE 403 Q + Q G +R+++ +RP LDDL LE A+R L+ +M G + + + +E Sbjct: 233 LQELRQHIRGCLTDMRQIIFDMRPMSLDDLGLEPALRQLISKMRERGM-LDASIAVEGEE 291 Query: 404 SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP----G 459 L++ V++FR+ QE LNN+ +HA ++ L + ++D+G G P Sbjct: 292 QKLAKYAEVSIFRIVQESLNNVSRHAGVKKAEVRILYTASALAITVKDEGRGFDPDAEED 351 Query: 460 SGQQG---------------------FGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 + G +GL GMRER +G L+I GT + + +P Sbjct: 352 AVPSGEEQFDDDRDVNDPILRNAYGQYGLLGMRERAAIIGAELNIISEIGKGTCIHLRMP 411 Query: 497 QR 498 R Sbjct: 412 FR 413 >UniRef50_Q2SUK5 Two-component hybrid sensor and regulator n=33 Tax=Burkholderiaceae RepID=Q2SUK5_BURTA Length = 740 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 104/487 (21%), Positives = 166/487 (34%), Gaps = 55/487 (11%) Query: 62 VLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTA 121 +L L++ + M+ LP L+ W + Sbjct: 242 GILRTTSLVVLAGGYLFTAFMASVHMLTFPGLFLPSGLLDAGPQTTAWLYMFWHSGFPLC 301 Query: 122 AALLQSLPWLWHGKESWNALLL---TLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQP 178 AL + G + L + G L + + LP Sbjct: 302 VALYTLVSRRERGAPLYTGRLAFPVGVCIGTALVATGVFAALATSGRELLPAIMDNHHYT 361 Query: 179 INWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIA--------------LAW 224 RG +L+ + L P + + + L + Sbjct: 362 PLMRGVVTTVWLMTLGALILLASRRPHSVLDLWLIVVLCAWLLDIALSAVLNHGRFDLGF 421 Query: 225 HYGWQGALIATLMNAIALIAS------------------------QTWRDHPVDLLLSLL 260 + G L+A+ +AL+ +T R + + LL Sbjct: 422 YAGRIYGLVASSFVLLALLLENGKLYARTVHALQGERIERRRVQEKTVRLNEANELLEQR 481 Query: 261 VQSLTGLL------LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 V T L L I ++L + + +A E R +ARELHD Sbjct: 482 VAERTSELQTANDELRREIVERERAEEALARSREELREIAAISSTAREQERGRIARELHD 541 Query: 315 DIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 ++ QT+ +R R++ + + L G A RR+ LRP LDDL Sbjct: 542 ELAQTLAMLRLDLE---RVSTTGNELAGRFTEMRGLLDGAVAATRRIASDLRPLMLDDLG 598 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 L AI+ L++ + GI L E L E Q T FR+ QE L N+ +HA AS V Sbjct: 599 LVPAIQWLVQAFQQRH-GIGCTLIVDPPELDLVEPQASTTFRILQESLTNVGRHARASHV 657 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHISCLH--GTR 490 ++ D +ML + D+G G + ++ FGL G+RER + GTL + GT Sbjct: 658 DIRLIADDREVMLSVRDNGVGFDTENPRKPNSFGLVGLRERAYLVQGTLSVQTAPGRGTA 717 Query: 491 VSVSLPQ 497 + V +P Sbjct: 718 IEVHIPL 724 >UniRef50_A8LRP9 Integral membrane sensor signal transduction histidine kinase n=28 Tax=Rhodobacterales RepID=A8LRP9_DINSH Length = 480 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 131/271 (48%), Gaps = 13/271 (4%) Query: 233 IATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQH 292 +A A +QT+ L +LL +GLL+ +RL + A+ + Sbjct: 201 VAAARAATESRIAQTFFWIGAITLAALLAVFASGLLINIRERRLAD---------AKLKA 251 Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASVKQSGQLIEQLS 351 L +R+L+T+E R VARELHD I Q + IR + +R +A +++ + Sbjct: 252 LTQRVLDTQEEERGRVARELHDSISQLLVGIRYALELARRRVQTGDARAQENIEKGIDGL 311 Query: 352 LGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQR 411 G VRR+ LRP QLDDL L AI+ L E GI + ++ + + L + Sbjct: 312 NGAIQEVRRISRDLRPGQLDDLGLGPAIQDLAEEFTKR-TGIRAEMKTVVFRNRLDPEAK 370 Query: 412 VTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-PPGSGQQGFGLTGM 470 + L+R+ QE L NI +HA A+ V L + L + D+G GL G G GL M Sbjct: 371 IALYRIAQEALTNIERHAQATEVHLDLFGHQTGATLRVADNGRGLANVSRGAGGLGLRNM 430 Query: 471 RERVTALGGTLHI-SCLHGTRVSVSLPQRYV 500 +ERV L GTL + S GTR+ ++P ++ Sbjct: 431 QERVEQLDGTLQVFSSEAGTRIDATVPLSHI 461 >UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67JE7_SYMTH Length = 477 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 79/305 (25%), Positives = 140/305 (45%), Gaps = 11/305 (3%) Query: 200 QLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSL 259 + + ++ R LAL + LA G+ G T+ + A+Q + + + Sbjct: 166 LMAMLRDMRRRQMLTLALACV-LAVLLGYLGIWKVTVRVPQLVRAAQAVGRGDLTVRVRP 224 Query: 260 LVQSLTG---LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDI 316 G ++ L + ++ A + L +++L +E R ++RELHD++ Sbjct: 225 GPADEFGHLAEAFNQMVRDLARTRALVVRKEAARKALLQKVLTAQEEERARISRELHDEV 284 Query: 317 GQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLE 376 GQ +T + +++ +A + + L+ G ++VRRL LRP LDD+ L Sbjct: 285 GQALTGLIVGLRVLE---EGDAERQSQVTYLRDLAAGTLESVRRLSRDLRPAVLDDIGLV 341 Query: 377 QAIRSLMREMELEGRGIVSHLEWRIDE-SALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 AIR + GI ++ DE L TL+R+ QE L N+ +H+ A Sbjct: 342 AAIRRYAGDF-ARYHGIEGTVQVVGDESVRLPPVVETTLYRITQEALTNVARHSQARHFG 400 Query: 436 LQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSV 493 + + + LVIEDDG G PG+ ++G GLTG+ ER+ + G + I GT + + Sbjct: 401 IVLDLRGPDVRLVIEDDGRGFDPGAPREGTGLTGISERLALVSGRMTIESSPESGTTLFI 460 Query: 494 SLPQR 498 ++P+ Sbjct: 461 AVPRE 465 >UniRef50_B5HYF1 Two-component system sensor kinase n=10 Tax=Streptomyces RepID=B5HYF1_9ACTO Length = 400 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 89/342 (26%), Positives = 134/342 (39%), Gaps = 25/342 (7%) Query: 182 RGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIA 241 R R LLL V QL L E + L + A W L T+ A Sbjct: 60 RRRMPERMLLLAVGLGVAQLALDVETTSADFAFLVIVYTVAATGARWASRLALTIGLCAA 119 Query: 242 LIASQTWRDHP------VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARN-QHLA 294 +A W + V +++ V +LG I+ R L++ AR + Sbjct: 120 PVAQLRWPNEHSGVLGNVAIVIFQTVPFALAWVLGDSIRTRRAYFAQLEERNARLEKERE 179 Query: 295 ERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLG 353 + + R +ARELHD + ++ + QA L A K++ + I Sbjct: 180 AQAKVAVAAERARIARELHDVVAHNVSVMVVQADGAAYVLDAAPDQAKKALETISSTGRQ 239 Query: 354 VYDAVRRLLGRLRPRQLDDLTL------EQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 +RRLLG LR + + + I L+ + G G+ + L Sbjct: 240 ALAEMRRLLGVLRTGEHQEGGEYVPQPDVEQIEDLVE--QCRGSGLPVDFKIEGTPRPLP 297 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASA-VTLQGWQQDERLMLVIEDDGSGLP------PGS 460 +T +R+ QE L N KH +A +++ D+ L L++EDDG G P G+ Sbjct: 298 SGVELTAYRIVQEALTNTRKHGGPNAGASVRLVYFDDGLGLLVEDDGKGAPHELYEEGGA 357 Query: 461 GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRYV 500 G GL GMRERV +GGTL G R+S LP + Sbjct: 358 DGAGHGLIGMRERVGMVGGTLDAGPRPGGGFRISALLPLKPA 399 >UniRef50_A5F1R9 Sensor histidine kinase n=52 Tax=Vibrionales RepID=A5F1R9_VIBC3 Length = 451 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 15/264 (5%) Query: 236 LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAE 295 + A+ T+ V L++++ V + L + RL + N + L Sbjct: 191 MQAAVNANIDTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKN---------LKDLVH 241 Query: 296 RLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVY 355 + + +E ++ +ARELHD I Q + + + ++ D + + + + Sbjct: 242 KTVLFQEDEKKHLARELHDGINQLLVSSKCHLELLANQLNDPKQIV-HLEKSQHSLITAI 300 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 + VRR+ LRP LDDL L+ A+ +L+ + +L + + + L TL+ Sbjct: 301 NEVRRISHHLRPSALDDLGLQAALTTLLEDFKL-HSQMEIEMLFDTQPGKLKSEVATTLY 359 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG--QQGFGLTGMRER 473 RV QE LNNI KHA A VT+ Q + L L++ DDG G ++G GL MRER Sbjct: 360 RVVQESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDDGVGFSSKEALQKRGIGLRNMRER 419 Query: 474 VTALGGTLHISCLH--GTRVSVSL 495 V +GG +S GT ++V L Sbjct: 420 VEFIGGEFELSSEPQLGTEITVLL 443 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 82/378 (21%), Positives = 158/378 (41%), Gaps = 28/378 (7%) Query: 132 WHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLL 191 W L+ + + P + + ++ L L + P+ R + WY Sbjct: 13 WIFVLIRTFWLIVIISANFMFPTSI----HTSSMIVLSLTFVVYLVPLIIRYKKPEWYPA 68 Query: 192 LFVIS-----LWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQ 246 +I+ L+L P+ L F + + + + +Y W G A L+ + Sbjct: 69 FDIITAGCFYLYLASVAPNLLWSFILVVIIIGLCSNRNNYIWSGIFCGF---AFPLLNAW 125 Query: 247 TWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE---- 302 P +L++S + G+ IQ ++ + + L + + EE Sbjct: 126 IANRPPYELIVSCSLGFAIGISFNILIQYHKQS----RIIEEQKLLLEQHINRIEELTLI 181 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLL 362 R ++ ELHD IG T+T++ ++ D+ + + ++ + +R+ L Sbjct: 182 EERNRLSHELHDTIGHTLTSLIAGVTSLRSSVPDSQ--FERIDSLISIAQHSLNDIRKHL 239 Query: 363 GRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGL 422 L L + +L + ++ L E ++ G +E+ + + L+R QE L Sbjct: 240 HELSHNPLSN-SLSEFLQQLTDEF-MKSTGTTVTFRMIGNETLVMQKVNFCLYRCLQESL 297 Query: 423 NNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLH 482 N V+H AS +++Q D++L L IED+G G+ Q GFGL+GM+ER+ + GTL Sbjct: 298 TNAVRHGKASNISVQLHFDDQQLRLQIEDNGIGM--KEIQFGFGLSGMKERLEQVQGTLS 355 Query: 483 ISC--LHGTRVSVSLPQR 498 + GT + ++P + Sbjct: 356 VQSNVEQGTLIICNIPLQ 373 >UniRef50_B2TG29 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Burkholderia RepID=B2TG29_BURPP Length = 370 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 10/261 (3%) Query: 249 RDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDV 308 ++ V G LLG + ++L + + + E+ +R + Sbjct: 105 ESRLWANVVITAVHDEQGDLLGFAKITRDMTERRRLEDLEHASAASALVQQARENEQRRI 164 Query: 309 ARELHDDIGQTITAIRTQAGIVQRLAADN--ASVKQSGQLIEQLSLG---VYDAVRRLLG 363 ARELHDD+GQ ITA++ + + A + + + + +++ + ++RR+ Sbjct: 165 ARELHDDLGQQITALKMTLALHETELARHFSEAGRARLGSVREMADQLDAMATSMRRIAA 224 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP LDDL LE A+ + E G+ E D L++ ++L+RV QE L Sbjct: 225 DLRPPMLDDLGLEAALEWMTEGFEQR-YGVPVRCEISPDVLCLNDLAAISLYRVIQEALT 283 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTL 481 N+ +HA A+ V + D L I DDG GLP + FGL GMRER++ LGG L Sbjct: 284 NVARHARANEVFVTLSADDRHYHLQIHDDGVGLPKAPAPRADCFGLLGMRERISQLGGVL 343 Query: 482 HISC--LHGTRVSVSLPQRYV 500 + G ++ +P V Sbjct: 344 SVDSIPGRGVTITARVPLARV 364 >UniRef50_C5CVV4 Histidine kinase n=2 Tax=Burkholderiales RepID=C5CVV4_VARPS Length = 456 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 113/253 (44%), Gaps = 17/253 (6%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 L L V S TGLLL R A+ + LA R+++++E R +ARELHD Sbjct: 209 AALCLGVVSATGLLLNLSEHR---------TAEAKLRLLARRVVQSQEEERGHLARELHD 259 Query: 315 DIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 QT+ + + V L + + Q VRR+ RLRP LD L Sbjct: 260 GTSQTLVSAKLLIESAVDALDRERQPAPPALSKALQRLNDSLIEVRRISHRLRPALLDTL 319 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L A+ L E EG I + + + LS+ + LFRV QE L N+ KHA A Sbjct: 320 GLPAALERLGDEFAEEGA-IDASIMIEGEAFELSQEAKTALFRVTQEALTNVRKHAQAHR 378 Query: 434 VTLQGWQQD-ERLMLVIEDDGSGLPPGS----GQQGFGLTGMRERVTALGGTLHISCL-H 487 V + D + + L I DDG G + ++G GL MRER+ ++GG L + Sbjct: 379 VHIALGFSDEDGVRLSIGDDGVGFDVEAMQLDARRGIGLRNMRERMESIGGRLDVQSGEG 438 Query: 488 GTRVSVSLPQRYV 500 GT + +P R Sbjct: 439 GTTIVAEVPARSA 451 >UniRef50_B2JH43 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JH43_BURP8 Length = 493 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 105/239 (43%), Gaps = 8/239 (3%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G L G ++L LA E ++ +ARELHDD+GQ +TA++ Sbjct: 250 GALQGFAKVTRDLTEHKRLEQLEHVGELAAATERAREEEKKRIARELHDDLGQQLTALKM 309 Query: 326 QAGIVQRLAADNASVKQSGQLIEQL---SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 A I+Q+ ++ L + A+RR+ LRP LDDL L A+ L Sbjct: 310 SAVILQQDVEAGHYTAETAAKARGLVVQADDTMSALRRIASNLRPTMLDDLGLLPAVEWL 369 Query: 383 MREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD 442 E GI + E A S+ +FR+ QE L N+ +HA A+ V + D Sbjct: 370 ADEFS-RRYGIKASTRLSAGELAFSDTASTAIFRIVQEALTNVARHACATEVVVTIELDD 428 Query: 443 ERLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQ 497 + I+D+G G PG FGL G+RERV L GT+ + G RV + P Sbjct: 429 NACEVRIDDNGRGAASAPGDKPDSFGLLGIRERVRQLNGTVSLGNRLDRGFRVQIRFPI 487 >UniRef50_B9XGC5 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XGC5_9BACT Length = 394 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 8/273 (2%) Query: 232 LIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQR--LRELNQSLQKELAR 289 + T+ +A+ + V L + L +R + + L++ + Sbjct: 84 VTGTMGEEVAIETLKNGATDYVLKLRLARLAPAVTRALRESKERSERKRAVEQLRQSHEQ 143 Query: 290 NQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI-VQRLAADNASVKQSGQLIE 348 + L+ L E E R ++R +HD++GQ +T ++ RL + V + + Sbjct: 144 LRALSIYLQEIREEERIRISRAVHDELGQALTGLKIDLSWLAHRLPKEMTPVLNKARDMS 203 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSE 408 VRR+ LRP LD L L AI E++ GI + +D + L E Sbjct: 204 AHIDETIQTVRRISTELRPGILDHLGLVAAIEWQANELQSR-TGIHCKISSSLDHTVLDE 262 Query: 409 NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--QGFG 466 + FR+ QE L N+V+HA A+ V + +++ RL+L ++D+G G+ + G Sbjct: 263 DLNTVFFRIFQETLTNVVRHAHATRVDVNLREENNRLILEVKDNGRGITKEQISNFKSIG 322 Query: 467 LTGMRERVTALGGTLHIS--CLHGTRVSVSLPQ 497 L GMRER + LGG + I+ GTRV VS+P Sbjct: 323 LLGMRERASLLGGEVVITGVPKKGTRVIVSIPL 355 >UniRef50_C6WV68 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV68_METML Length = 499 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 9/248 (3%) Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 +L+ V G+++ I + + LQ+ L + + +E R +ARE+HDD Sbjct: 256 VLADGVVQWVGMMIN--ITQSKNEKLELQESRHELAQLTAHMNQIKELERTRIAREIHDD 313 Query: 316 IGQTITAIRTQA-GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 +G +TAI+ I+ R+A + + +E + ++A+ ++ LRP LD L Sbjct: 314 LGGNLTAIKIGLTSIINRIATGLPVSFEQAKGLESIVDNTFEAIHKISSDLRPNILD-LG 372 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 + A+ +E E + G+ + ++ +Q +TLFR+CQE ++NI KHA+ASAV Sbjct: 373 IVAALEWQAKEFEKQV-GVTCTFTTNQADIVVTPDQAITLFRICQESMSNIAKHANASAV 431 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHIS--CLHGTR 490 + +++ I D+G G+ FGL GM+ERV AL G+ I GT Sbjct: 432 HVDLNLHYGEIIMKISDNGIGINTADTYKPNSFGLRGMQERVAALYGSFDIEQLAGQGTV 491 Query: 491 VSVSLPQR 498 ++V+LP Sbjct: 492 IAVTLPIE 499 >UniRef50_B8FX95 Sensor DegS domain protein n=3 Tax=cellular organisms RepID=B8FX95_DESHD Length = 393 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 8/216 (3%) Query: 288 ARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA-DNASVKQSGQL 346 Q +A++++ ++ RR VARE+HD Q + I + I ++L A D V+ Sbjct: 172 EHRQEIAQKIIRAQDEERRRVAREIHDGPAQNLANIVLRLEIAEKLLALDPTRVRAEITD 231 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESAL 406 ++ L +RR++ LRP LD+ A+ + + E + + E L Sbjct: 232 LKGLVRSNLQDIRRIIFDLRPIALDNHGFISALEKYLMTFQ-ETYHLTCDFKVIGKERRL 290 Query: 407 SENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG----SGQ 462 V LFR QEGL NI KHA A + ++ ++ + I D G G + Sbjct: 291 LPAVEVALFRSLQEGLTNIAKHARADWARVLIEYEECQIQIQITDRGIGFNVEEAFANPG 350 Query: 463 QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 FGL GM+ER+ G + ++ + GT V + +P Sbjct: 351 DHFGLVGMKERIEMFNGQIILTSIPKKGTTVKLIVP 386 >UniRef50_Q46PY7 ATP-binding region, ATPase-like:MASE1:Histidine kinase, dimerisation and phosphoacceptor region n=3 Tax=Burkholderiales RepID=Q46PY7_RALEJ Length = 556 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 110/534 (20%), Positives = 182/534 (34%), Gaps = 67/534 (12%) Query: 20 AAWFCLWSISLHLVERPDMAVLLFPF-GLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAV 78 +F + L L++P G+ L +L P + L + + Sbjct: 21 LTYFAGAKLGLTYAVVGGAVSLVWPSSGIALAALLTMGYVVAPGIAIGSVLANVSVGVPL 80 Query: 79 GLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESW 138 + L + L R + A L AA+ + G Sbjct: 81 HIAVVIGLGATAAALAATWLLTRAARFHIALDRIRDVLAFLIVAAIFSTAVSALVGATVL 140 Query: 139 NA----------------LLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWR 182 L + G L +AP L + Y + +L S P Sbjct: 141 RGGGLLAGSQYGRAMLEWWLGDMMGVLVVAPPLLTLFTYRS---------ALGSAPQAVE 191 Query: 183 GRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIAL 242 L L ++ L + ++ A + GA ++TLM +I Sbjct: 192 ACALAVATLSASYLIFGAPQLAGHGYYPAALAIFPFVVWAALRFDHPGASLSTLMVSIMA 251 Query: 243 IASQT------WRDHPVDLLL----SLLVQSLTGLLLGAG-------------------- 272 I T DHPVD L+ V ++TGLLL A Sbjct: 252 IWGTTQGTGPFASDHPVDSLVRWCAFANVVAITGLLLAAARAQERRIHGILLASQAELER 311 Query: 273 -----IQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ- 326 Q L++ N L++E+AR + L L+ + +R + RELHD +GQ +T++ Sbjct: 312 RVQERTQDLQQANTELKQEMARRRQLEAELIRIGDRQQRLIGRELHDGLGQHLTSLGFYC 371 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A + Q L I +L R++ L P L+ L A+ +L + Sbjct: 372 ASLSQELQKHRHPAAADAATIVELVRQASLMARKIAHGLDPIALESGGLSAALETLAQTT 431 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 GI L + + ++ L+R QE +NN +K++ + + + Sbjct: 432 GT-LNGIDCRLRIGSEVGQMDSPVQINLYRAAQEAVNNALKYSHGQHIWIDLEFEAGVQR 490 Query: 447 LVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLP 496 L + DDG G+ P G G +R R + LGG ++ GT V +S P Sbjct: 491 LSVSDDGVGMDPAQMGHTSGLGFYNLRHRASLLGGACAVTRNATGGTTVIISYP 544 >UniRef50_C6D5A2 Histidine kinase n=5 Tax=Bacillales RepID=C6D5A2_PAESJ Length = 386 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 12/248 (4%) Query: 260 LVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQT 319 + S ++L L ++++ L+ R Q + +++ +E R+ ++RE+HD Q+ Sbjct: 134 TIASQINVVLQYLSGDLNQVSRILESAKTR-QMIGLKIIVAQEEERKRISREIHDGPAQS 192 Query: 320 ITAIRTQAGIVQRLAADNA--SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQ 377 + I + IV+R+ V+ ++ + +R+++ LRP LDDL L Sbjct: 193 LANIVLRTEIVERMLLKKEFQMVQDELLDLKGQVRSGLEEIRKIIFNLRPMALDDLGLVP 252 Query: 378 AIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ 437 A+R + E + I + E E + +FR+ QE N KHA AS VTL+ Sbjct: 253 ALRKFAHDFEDK-TKIRTIFELSGKEVRMPSAMEAGVFRLVQEAFTNAQKHARASFVTLE 311 Query: 438 GWQQDERLMLVIEDDGSGLPPGSGQQG------FGLTGMRERVTALGGTLHISC--LHGT 489 E + + I D+G G + FGL GMRERV L G + I GT Sbjct: 312 VAFTTETVTIAIVDNGIGFHSEQAEAHAQNNSSFGLIGMRERVDLLEGRMEIDSKLGQGT 371 Query: 490 RVSVSLPQ 497 ++ +++P Sbjct: 372 KIIINIPI 379 >UniRef50_Q1IIL1 GAF sensor signal transduction histidine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIL1_ACIBL Length = 552 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 19/291 (6%) Query: 218 PIIALAWHYGWQGALIAT--LMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQR 275 P W L A ++ + + ++ + P + L + + L + + Sbjct: 242 PFCRDKAQALWGVPLKAGEKVIGVMLIGFAKPYVWLPTEHELLRAIADRSALAI-----Q 296 Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 + ++L++ AR L+ LL +E R+ ++RELHD+ GQ + IR G+++ Sbjct: 297 RAGMTEALREREARIAELSGYLLRAQEEERKRISRELHDETGQALMVIRLYLGMLEATVT 356 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 + K ++ + +RR++GRL P L +L L AIR +++ + G+ + Sbjct: 357 TR-TAKTKIHETLEVVDRTIEGIRRIIGRLSPLVLQELGLIAAIRKEAKDL-AKSAGVKA 414 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 + + LS ++RV QE L+N+ KHA A+ VT+Q + + L IEDDG G Sbjct: 415 KVSVGDNVGRLSPVTETAVYRVVQEALHNVAKHAHATTVTIQLRRDGGLVKLCIEDDGVG 474 Query: 456 L----PPGSGQQGFGLTGMRERVTALGGTLHISCL------HGTRVSVSLP 496 + P G++ FGL GMRER+T L GTL + GTR+ V++P Sbjct: 475 IKQSQKPNPGRRSFGLAGMRERITTLEGTLKVGPASRNDEGAGTRIEVTVP 525 >UniRef50_Q251B4 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q251B4_DESHY Length = 372 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 12/234 (5%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 A + LRE + ++ + L + ++ +E R+ V+RELHD++GQ I ++ ++ Sbjct: 138 AVVAILREFSPQQEEYVQNL--LTKYIIRAQEDERKRVSRELHDELGQNIYSVLVGLQVL 195 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 ++ + Q ++Q+ ++ + LRP LDDL L AIRS ++ E + Sbjct: 196 EKAMPEAVQ----IQNLQQMVARSLAMLKNIAVELRPSTLDDLGLAAAIRSFLKHFE-QT 250 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 GI L ++ L+R+CQE + N+ K+A + V + ++L L++E Sbjct: 251 YGIEGQLTVSGEQHRYEPEIETALYRICQEAMLNVAKYAKVTEVQVFLQNYPDQLNLIVE 310 Query: 451 DDGSGLPPGS---GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 D G G G G GL GM+ER +GG + I GTRV ++P Sbjct: 311 DQGVGFDVGQLEIQGTGLGLYGMKERAQLVGGKVEIVSQVNLGTRVQATIPLTE 364 >UniRef50_A7BTT3 Sensory transduction histidine kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BTT3_9GAMM Length = 732 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 11/240 (4%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 I L++ + L N+ L R + +E + +A ELHD+ GQ ITAI+ A + Sbjct: 467 QDISELKQAQAETLRLLEENRFLIHRSMAIKEEELKRLAYELHDEFGQCITAIQADAETI 526 Query: 331 QRLAADNASVKQSGQ-------LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 LAA I ++S YD V L+ +LRP LD+L L +A+R L+ Sbjct: 527 VDLAARKQQQPIILNKINLSANAILEVSSHAYDVVHSLMQQLRPSGLDELGLVEALRDLV 586 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQD- 442 + + + L E + ++RV QE L NI K+A AS V+++ Sbjct: 587 STWQARHKKTRCIFRATGELHHLGETINIQVYRVVQECLTNIAKYAQASHVSIKLTVDSV 646 Query: 443 -ERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 + L+L ++D+G G+ ++G GL GMRER TAL G L + G ++++ +P Sbjct: 647 KKILILCVQDNGQGMNLTQYKRGLGLIGMRERATALEGNLQLESALGDGVQITLIIPIAE 706 >UniRef50_A0LNB4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNB4_SYNFM Length = 784 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 24/245 (9%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 I ++L +++ + ++L+ RLL +E R+ VA ELHD IGQ++ AI+ Sbjct: 533 FIEDITERKKLEMAIKDSERQLKYLSSRLLTAQEEERKRVAAELHDSIGQSLAAIKYGVE 592 Query: 329 IVQR--LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 R +A +V S L+ + G + RRL LRP LDDL + I L +E Sbjct: 593 NAVRYGASAGEETVFHSLGLLIPIIQGAIEEARRLYMGLRPSMLDDLGVIVTIDWLCKEF 652 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 + ++E + E+ ++ +FRV +E LNNI +H+ A V + + Sbjct: 653 RRNYPEMRISERIELEEDCIPESLKIVIFRVVEEALNNISRHSRAEGVEVALSISGGAIR 712 Query: 447 LVIEDDGSGLPPGS------GQQGFGLTGMRERVT---------ALGGTLHISCLHGTRV 491 L + DDG G S ++GFGL GMRERV ++ G GT V Sbjct: 713 LDVADDGVGFDQDSLHHAVESEKGFGLAGMRERVALSGGSLSVSSIRG-------KGTTV 765 Query: 492 SVSLP 496 SVS P Sbjct: 766 SVSWP 770 >UniRef50_B9X9T9 Histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9X9T9_9BACT Length = 382 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 23/253 (9%) Query: 269 LGAGIQRLRELNQSLQKELAR--------------NQHLAERLLETEESVRRDVARELHD 314 L I+ + + L++ +HL+ ++L +E R+ ++RELHD Sbjct: 122 LKREIEERKRAERELRESEEHYRILFNQARLMQENLRHLSSQVLHVQEEERKRISRELHD 181 Query: 315 DIGQTITAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 ++GQ +TA+ +++ N ++ ++L ++V LRP LDDL Sbjct: 182 EVGQALTAVNVSLALLKNAIDIKNVELRNKITDTQKLLEQTMESVHAFSRELRPAMLDDL 241 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L +RS ++ GI L+ +Q+ L+RV QE L NI KHA AS Sbjct: 242 GLIPTLRSFVKSF-ARRTGIQVSFWATDAVEKLAIDQKTVLYRVGQESLTNIAKHAHASH 300 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGS-----GQQGFGLTGMRERVTALGGTLHISCLH- 487 + + + I+D+G G+ GL G++ERV G + Sbjct: 301 GAVTIRKSKNGFAMEIKDNGKSFQVDQKIALKGKNRLGLLGIQERVKLADGEFKVESTPG 360 Query: 488 -GTRVSVSLPQRY 499 GT++ V +P Sbjct: 361 KGTKLLVWIPMNG 373 >UniRef50_Q7X326 Putative sensory transduction histidine kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X326_9BACT Length = 454 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 4/249 (1%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 L L L+V + L +R + + + + L+++L+ T+E R++++RELHD Sbjct: 195 LSLGLIVALVAVYRLRVLEKRSDQQRVVAEDAERQMRQLSQQLVATQEDERKNLSRELHD 254 Query: 315 DIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 +GQ +TA+R + G ++R+ A +A + + + L ++ VR L LRP LDD Sbjct: 255 HVGQVLTALRMEIGRIERMRAPADARLGAAVIECKTLVDDMFRTVRNLALGLRPSMLDDF 314 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L+ A+ +R++ G+ L D AL + R ++R QE L N V+HA A + Sbjct: 315 GLQAALEWHVRDLASR-YGVDVELTMTGDFDALPDRYRTCVYRAVQEALTNCVRHASARS 373 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRV 491 +T+ E+L + DDG GL + G GL G+ ERV L G++ I GT++ Sbjct: 374 ITVTVTSNGEQLEAFVADDGVGLDQSRRRNGLGLRGIEERVRDLNGSMTIDALSGKGTKL 433 Query: 492 SVSLPQRYV 500 ++ LP Sbjct: 434 AIRLPLPEA 442 >UniRef50_UPI0001692E35 hypothetical protein Plarl_02603 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E35 Length = 277 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 9/237 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + + +L + LQ++ L +LL +E R+ ++RELHD+ Q +T+ Sbjct: 27 LISSNTEIEKLLKELQEKERLRDTLILKLLSAQEDERKRISRELHDETSQALTSFMVTMR 86 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++ A D ++ +++ + +R L LRP LDD+ L AI+ +++ E Sbjct: 87 VLANEAKDAEQ-QELLNTSREIAASILREIRDLAVELRPPILDDMGLIPAIKKYIQKFEE 145 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + GI L ++ A+ V L+R+ +E L N+VKH A+ + + D + L Sbjct: 146 K-YGIAVVLSAPEEDIAIDSRTAVALYRILRESLTNVVKHTAATRIVIGLRLADHCIQLT 204 Query: 449 IEDDGSG-----LPPGSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQR 498 + D+G G Q GL GM+ER LGG+ + GT + VS+P + Sbjct: 205 VHDNGHGIQQEDFERARRQNRIGLYGMKERAELLGGSFFVRTTNIGGTELIVSIPLK 261 >UniRef50_A4XZI6 Multi-sensor signal transduction histidine kinase n=17 Tax=Pseudomonas RepID=A4XZI6_PSEMY Length = 801 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 15/275 (5%) Query: 226 YGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQK 285 + WQG ++ + T R ++ + I + +L Sbjct: 529 WYWQGRILTAEQEVLWADIRTTARPLGGGRVVWDGILW--------DITENKLAELALAD 580 Query: 286 ELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSG 344 AR + L+ L E + +ARE+HD++GQ +T ++ + + + A + + Sbjct: 581 SRARLRELSAHLESVREEEKARIAREVHDELGQVLTVLKLETAMCELACAGQVPELDERL 640 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 +++L ++ VR + LRP LD + AI +R E I +E Sbjct: 641 ASMKRLIAQLFQLVRDVATALRPPILD-AGIASAIEWQVRRFEER-TQIPCLVEVPEHLP 698 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG 464 L + Q + LFR+ QE L N+++HA A +V ++ WQ++ L L + DDG G + G Sbjct: 699 RLPDAQAIGLFRILQEALTNVMRHAGAHSVVVRLWQEEGGLCLSVSDDGKGFDAAMRKPG 758 Query: 465 --FGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 FGL GM+ER+ LGG L I GT + + Sbjct: 759 QSFGLVGMQERMLMLGGQLQIDSRPGEGTTLYARI 793 >UniRef50_Q2BPE6 Sensor histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPE6_9GAMM Length = 451 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 9/260 (3%) Query: 237 MNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAER 296 + AI L ++ R+ +++ L + L+G I + Q R + LA Sbjct: 193 VAAIRLKVTRNIRNTFFTVVVILAGTVIIIALVGVAIN-----MHASQLADERLRQLAHN 247 Query: 297 LLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVY 355 ++ + S RR+ ARELHD I Q + +++ + + + +L + S + Sbjct: 248 HVQFQVSQRRNFARELHDGINQLMVSVKFRLELARDKLLKQDDSAVNDLDKGCDVLNMAI 307 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 VRR+ LRP QLDDL LE AI S+ + R + ++ + E L ++ +TL+ Sbjct: 308 QEVRRISHDLRPIQLDDLGLESAIYSMTSDFSERTRMLT-NVRIELPEQRLPDDIEITLY 366 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVT 475 R+ QE L NI KHA+A+ V ++ W ++ + + + DDG G + G GL MRER Sbjct: 367 RIVQESLTNIEKHAEANNVGIRIWPKEGYIWVEVADDGKGFVEDKAEAGIGLLNMRERTE 426 Query: 476 ALGGTLHISCLH--GTRVSV 493 L G + GT++ Sbjct: 427 LLSGHFSLKSRPGSGTKLRA 446 >UniRef50_C9PG27 Sensor histidine kinase n=2 Tax=Vibrio RepID=C9PG27_VIBFU Length = 458 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 17/254 (6%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 ++ + V + GL + R N+ L L ++++ ++E+ R+ V+RELHD Sbjct: 214 GVVFIAVSVIAGLGASLNLNVRRMANEQL-------SQLNQQIINSQENERQRVSRELHD 266 Query: 315 DIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLT 374 + Q + A + + VQR D + + + + +RR+ LRP QLDDL Sbjct: 267 GVNQLLVAAKYRIDNVQR-EQDEQRKQTELEASKAVMEHAIVELRRISRDLRPPQLDDLG 325 Query: 375 LEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAV 434 L I + + ++ + E ID + TL+RV QE L+N+ KHADAS V Sbjct: 326 LVAGIEAYLNDLR-RRTDLELVFEHDIDGVEMVAEVETTLYRVVQESLHNVEKHADASGV 384 Query: 435 TLQGWQQDERLMLVIEDDGSGLPPG------SGQQGFGLTGMRERVTALGGTLHISC--L 486 + ++ L+L I DDG G+ + Q GL M+ERV A+GG +S Sbjct: 385 DVVMQREGRLLILTISDDGKGITKERLKQKTAPQDHMGLQNMKERVQAIGGQFSVSSEVG 444 Query: 487 HGTRVSVSLPQRYV 500 GT + VSL +V Sbjct: 445 EGTEIRVSLDMEFV 458 >UniRef50_C7RBI0 Histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI0_KANKD Length = 247 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 7/233 (3%) Query: 265 TGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 L+ Q+ +++ Q L + + LA+R+ +E R+ +ARELHD +GQ +TA+ Sbjct: 7 ISELVNELSQKQQKIAQELLSGNQQMRTLAKRVWRVQEDERKHIARELHDGVGQLLTALI 66 Query: 325 TQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 Q + + + + + L+ R + +RPR LDDL L A++ L R Sbjct: 67 NQLQQMHKEGEPDP---KELEEALTLARQALSDTREISRLMRPRILDDLGLIPALQWLSR 123 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 M + I L ++ L + + +FRV QE + N +KHADA+ + + + Sbjct: 124 VMGEKNS-IKIDLHEQLS-VNLDDETQTLVFRVVQEAITNAIKHADATHIDITVIATERM 181 Query: 445 LMLVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 L+L I D+G G+ + + +GFGL+ MR+RV A GG L + G + + Sbjct: 182 LVLKIRDNGVGMTKETSESVEGFGLSAMRDRVAAFGGQLMVESQPGDGCEIKV 234 >UniRef50_Q2B2D2 Two-component sensor histidine kinase n=2 Tax=Bacillus RepID=Q2B2D2_9BACI Length = 345 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 143/329 (43%), Gaps = 17/329 (5%) Query: 185 HLVWYLLLFVISLWLQLGLPDELS-----RFTPFCLALPII-ALAWHYGWQGALIATLMN 238 + L F + + + L DE F F L I+ A ++G +G+ + Sbjct: 18 MALISSLTFFVGIQIYLFFADEPVLTISISFWLFIYCLLILLAAGGYFGIKGSYLIKGRL 77 Query: 239 AIALIASQTWRDHPVDLLLSLLVQSLTGLL---LGAGIQRLRELNQSLQKELARNQHLAE 295 L+A R + +S GL+ L ++E S+Q+ LA+ Sbjct: 78 GDILVAVSNLRSGKLAGRISSYENDEIGLIAEELDGLADYIQEQVHSVQRLAEERSSLAQ 137 Query: 296 RL-LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQSGQLIEQLSLG 353 R+ +AR+LHD + Q + A+ + ++ D+ K+ + I ++ Sbjct: 138 SAHAAAVMEERQRLARDLHDVVSQQLFALSMMSSAALKVFDRDSEKAKKQLKEISGIAAK 197 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 +R LL LRP QL D TL I L+ E+ + + IDE LS+ Sbjct: 198 AQGEMRALLLHLRPIQLSDDTLCDGIIKLIHELRGKTT---IDFQASIDEIELSKAAEEH 254 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMRE 472 LFRV QE L+NI++HADAS + L ++++ L I DDG G P + +GL MRE Sbjct: 255 LFRVVQEALSNILRHADASKIKLTLTEKEDYTYLFIGDDGKGFDPHIERVASYGLKTMRE 314 Query: 473 RVTALGGTLHISCLH--GTRVSVSLPQRY 499 R +GG +I GT + + +P + Sbjct: 315 RCEEIGGIFNIRSKQGEGTYIEIRIPLKG 343 >UniRef50_B0TH54 Sensor histidine kinase, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH54_HELMI Length = 382 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 9/242 (3%) Query: 265 TGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIR 324 G++L L++L+ + + R Q A R++ ++ R +ARE+HD Q + ++ Sbjct: 138 VGVVLDFMGGNLKDLHVKMDEAQVRQQA-ALRIIMAQDRERFRLAREIHDGPAQGMNSLV 196 Query: 325 TQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLM 383 Q + +RL D V++ Q ++ +R++L LRP LDD L +AIR Sbjct: 197 LQVELCERLLQTDPGRVRRELQELKGRLRDSLKELRKILYDLRPHGLDDQGLIEAIRRYT 256 Query: 384 REMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDE 443 + G+ + L V +FR+ QE L N+ KHA A V + + Sbjct: 257 ADFSER-TGLAVETRFFGQACRLERAYEVAIFRMIQEALQNVWKHAGAKRVQVAFEIAPQ 315 Query: 444 RLMLVIEDDGSGLPP----GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + +++ DDG G FGL GMRER L G + GT++ +P Sbjct: 316 AVSVIVRDDGVGFDVADIFARPGDRFGLCGMRERAELLDGEWEVLSRPGQGTQIKFRIPL 375 Query: 498 RY 499 + Sbjct: 376 KS 377 >UniRef50_B9TQ72 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TQ72_RICCO Length = 249 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 5/230 (2%) Query: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 ++ + ++Q LQ+ + + L+ L E R +ARELHDD+GQ + ++R Sbjct: 21 IILRDVTERHMVHQKLQRSRDQLRQLSAALQTIREEERTYIARELHDDLGQILASLRMDL 80 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 ++Q+ A ++ +E L ++RR+ LRPR LD+ L A++ L + Sbjct: 81 SLLQKDGTGTAEARRLMAGMESNLLTAIASLRRIATNLRPRALDEGGLYFALQGLRDDFV 140 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 GI + L E L + +FR+ QE L NI +HA+AS VT+ ++ + L++ Sbjct: 141 ERH-GIPATLFADEAELRLDDAASTAIFRIVQEALTNIARHANASHVTMNLYRLNGELLI 199 Query: 448 VIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSV 493 I DDG G+ + GL GMRERV A+ G + IS GTR+ + Sbjct: 200 QIRDDGRGIKAEDMEKAESLGLIGMRERVWAMNGDITISSEEPPGTRIDI 249 >UniRef50_A1K959 Putative sensory box histidine kinase n=1 Tax=Azoarcus sp. BH72 RepID=A1K959_AZOSB Length = 687 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 6/230 (2%) Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ 331 + R L + + AR + LA L E +ARE+HD++G T+T ++ V Sbjct: 446 DMTERRHLQEEQVETAARFKRLAAHLDMVREEQSTKIAREVHDELGSTLTMLKLGLATVA 505 Query: 332 RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 ++ + + V+R+ LRP LD L L I R+ Sbjct: 506 DDETTPPRIRNKFAGMLEQIDAALQTVKRISTSLRPATLDTLGLIATISWYARQFSS-MT 564 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 GI L+ + L+ +FR+ QEGL N+ KHA A+ V L +Q +L++ I D Sbjct: 565 GIDVALQMP-EYVRLTPAANTAVFRIIQEGLTNVAKHAGANRVDLTLQKQSGQLVVRISD 623 Query: 452 DGSGL--PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +G GL S + FG+ GM ER LGG L +S GTR+++++P Sbjct: 624 NGVGLTSDSLSKRNSFGVIGMHERAQHLGGRLTLSGAPQTGTRLTLTIPL 673 >UniRef50_Q01N85 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01N85_SOLUE Length = 462 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 5/256 (1%) Query: 244 ASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEES 303 AS +L +L I L + L+ + Q L+ LL +E+ Sbjct: 193 ASAAGNLRRYLMLTFAGTLGGGLILALVTIAFTLRLERELELRRSDLQELSTLLLRAQEN 252 Query: 304 VRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 RR +ARELHD+IGQ+++AI + + A A + I+ L+ + VR L Sbjct: 253 ERRALARELHDEIGQSLSAILMETEGAE-CAERRADLSSHLDSIKGLAEKTVNQVRDLAL 311 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP LDDL L A+ RE G+ + L + R ++R+ QE +N Sbjct: 312 LLRPSMLDDLGLAPALNWHARETSKR-TGLNVVVSADDAIDDLPDEHRTCIYRLVQEAVN 370 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI 483 N V+HA+A V + ++ ++ + + D+G+G +G GL GM ERV LGG L I Sbjct: 371 NAVRHANARTVDVSVRKEGHKVNVTVRDNGAGFDT-RFLRGLGLLGMEERVRRLGGRLKI 429 Query: 484 SCLH--GTRVSVSLPQ 497 + GT V +LP Sbjct: 430 TSEPGRGTLVHAALPL 445 >UniRef50_B1ZVP9 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZVP9_OPITP Length = 521 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 13/237 (5%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L I +E + ++ AR Q L+ RLL +E RR +ARELHD +GQ +T +R + Sbjct: 288 LEGEIGVRKEAERRAEENAARLQALSNRLLTVQEDERRSIARELHDQVGQLLTGLRFRLE 347 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +R D +++ ++ ++ + VR + +LRPR LDDL L A+ + Sbjct: 348 ATRR---DPSALTEALA----VTDELIRTVREMTLQLRPRMLDDLGLRPALEWHVDRFRQ 400 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + GI L+ + E L T++R+ QE L NI +HA + + + D+ L + Sbjct: 401 Q-TGIAVELDIALPEQRLPAVLETTVYRIVQEALTNIARHAGSPSAVVTVAADDQALHVE 459 Query: 449 IEDDGSGLPPGSG---QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRYV 500 I D G G + GL G+ ERV GG L + GTR+ R Sbjct: 460 ISDRGRGFDTAAALAKHNSIGLAGLAERVRLAGGELELFSQPGQGTRIHAEFTLRPA 516 >UniRef50_Q3SJC2 Multi-sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJC2_THIDA Length = 1168 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 16/278 (5%) Query: 224 WHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSL 283 + + W+G + A + + T ++ G++L +L EL L Sbjct: 892 YPWSWEGRIRAGSLGETWVSLRATPTLLLDGGVVW------DGIILNVTQTKLNEL--EL 943 Query: 284 QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQ 342 ++ + L E R+ +ARE+HD++GQ +TA+R + V DN + + Sbjct: 944 RQSRESLRLLTAHREAVREDERKHIAREIHDELGQLLTALRMEVSAVGMAFGRDNPELDE 1003 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 + ++ + VR++ LRP LD L LE AI L E + + + Sbjct: 1004 KVRSMKTVINQTIQTVRQVATSLRPAALD-LGLETAIDWLASEFCKRNA-VECAVAIPGE 1061 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 AL E + LFR+ QE L NI +HA A++V+++ E + L + D+G G P + Sbjct: 1062 -IALDEVRATALFRILQETLTNIARHAGATSVSIKLKTTGEEICLKVTDNGRGFDPEEAK 1120 Query: 463 QG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 QG FGL G+ ERV LGGT+ I G ++V +P Sbjct: 1121 QGGSFGLKGIAERVLILGGTMTIKSAPGQGAELAVCIP 1158 >UniRef50_Q747N5 Sensory box histidine kinase n=2 Tax=Geobacter RepID=Q747N5_GEOSL Length = 518 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 9/233 (3%) Query: 276 LRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 +R + ++ R++ L++RLL +ES R+ ++RELHDD+GQ + A++ + Sbjct: 260 VRRDITARKEAEQRSRMLSQRLLHAQESERKRLSRELHDDLGQLLNALKIGFDTLAEDLR 319 Query: 336 DNA-SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 + V+ + + +RRL L P L+ L L + IR + + Sbjct: 320 QPSHDVQDRLWYLSESLNNSIHTIRRLCAGLHPSTLERLGLAETIRQQCTQ-AATTHSLD 378 Query: 395 SHLEWRIDE-SALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 L+ L + + L+R+ QE L+N+VKHADA+ V ++ + L IED+G Sbjct: 379 IELKCGTMLGVRLESDTEINLYRIFQEALHNVVKHADATRVMVRLVASHPTVRLQIEDNG 438 Query: 454 SGLPPGS----GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRYV 500 G GL M ERV LGGT I+ L GT V+V +P R Sbjct: 439 GGFSMEDYAELSGHHLGLISMAERVELLGGTFQIASLPGLGTAVTVEVPFRKA 491 >UniRef50_C1DSJ2 Intracellular sensory histidine protein kinase, two component n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSJ2_AZOVD Length = 356 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 4/233 (1%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I Q L+ + + LA + E +R +ARE+HD +G +T+I+ Sbjct: 123 VAIDITDRHNYEQELRNSREQLRILARHSNKLAEQLRARIAREIHDVLGGVLTSIKLDTN 182 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +++ A + ++ + + I LS D VR + +L P LD L L+ A+R+ Sbjct: 183 RLKQRADNPETL-EIIESILGLSQEGIDMVREISEQLYPAVLDHLGLDAALRNDFERF-C 240 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 G+ L ++ + ++R+ QE L NI KHA A VT+ + + Sbjct: 241 RRTGLNGDFHTSCTALNLGGSKSLAVYRIFQEALTNIAKHAQAEIVTVDVGLDRQLFHME 300 Query: 449 IEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHI-SCLHGTRVSVSLPQRY 499 I+DDG GL ++G GL M+ER +GG L I GTR+ + +P + Sbjct: 301 IKDDGQGLHANFPREGSLGLLSMKERAAEVGGMLEISGTARGTRLHLQIPLQE 353 >UniRef50_D1VK31 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID=D1VK31_9ACTO Length = 459 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 93/393 (23%), Positives = 153/393 (38%), Gaps = 26/393 (6%) Query: 130 WLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPI---NWRGRHL 186 L + + LL +T V L+ P+ R R L Sbjct: 43 LLMLPMLAISTLLAVITLPAVRTQHTRVEIGVAVVAVAALWSTGLIRYPVTGVPPRSRWL 102 Query: 187 VWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQ 246 V+ + L + + + L + FT + LA + A G+ + + + A + Sbjct: 103 VFGVHLTLAATLVWLNPWYGVFAFTGYFLADELGGHARRVGFVAVALVSAASQAAGYPNG 162 Query: 247 TWRDHPVDLLLSLLVQSLTGLLL-------------GAGIQRLRELNQSLQKELARNQHL 293 + L+++ L++ G I L E N+ LQ + N L Sbjct: 163 SNAHTVTYLIMAAFNVVAVLLMVNLTNRVMEQNTERGRMIAELAETNRQLQASMDENAGL 222 Query: 294 AERLL-ETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIE 348 +LL + E R +A E+HD + Q + I TQ +R AD A + +L + Sbjct: 223 HAQLLTQAREAGVAEERGRLAGEIHDTLAQGLAGILTQLEAARRAHADPAEWSRHIELAD 282 Query: 349 QLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSE 408 L+ RR + LRP QL+ +L A+ L R+ + + Sbjct: 283 GLARANLTEARRSVRALRPEQLEQASLSDALADLARDWS-RRTQVPAEAVTTGVPVRAPA 341 Query: 409 NQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP--GSGQQGFG 466 + +FR+ QE L N+ +HA A+ + D+ L+L + DDG+G P G+ FG Sbjct: 342 ETEMAVFRIAQEALANVARHAHATRARVTLSYLDDTLLLDVADDGAGFHPGAGAPPARFG 401 Query: 467 LTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +TGMR R ++ GTL I GT V+ P Sbjct: 402 VTGMRRRAESVAGTLSIESAPGDGTTVNAVFPL 434 >UniRef50_A5UUR7 Multi-sensor signal transduction histidine kinase n=2 Tax=Roseiflexus RepID=A5UUR7_ROSS1 Length = 469 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 99/472 (20%), Positives = 161/472 (34%), Gaps = 59/472 (12%) Query: 56 PRGYWPVLLGAEWLLIYWLTQAVGLTHFP--------------------LLMIGSLLTLL 95 P+ YW VLL WLL + A + ++G L L Sbjct: 16 PKMYWQVLLRLRWLLGGAIGLAFAIGRMLEALWFEPDTPITRVLGDVAAWGLLGGLAVWL 75 Query: 96 PVALISR---YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALL-LTLTGGLTL 151 + +SR + L Q A + ALL + + + +L +T L Sbjct: 76 TLTWVSRQEQRYQTGLEQALRDQQRAYSQLALLSEVNRRIVDSATLDDILDAAMTFPRRL 135 Query: 152 APICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFT 211 P L N ++ + R R L + P + R Sbjct: 136 VPARATAVVLLNPNGFVEARAQGMPGEELSRLRR-----ALGIADSVATARQPQMIERSG 190 Query: 212 PFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGA 271 CL LP+ GW + + + LL ++ + + Sbjct: 191 CACLVLPLHDGMALLGWIELHLEDSLPVA---------SDELALLETIANEVAEAIASAR 241 Query: 272 GIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IV 330 R L++ +A R +AR++HD I Q++ +R + + Sbjct: 242 RRSREERAIYQLERAIA--------------EERARIARDIHDGIAQSLAFMRMRVDLWL 287 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + D ++ ++ +RR + LRP Q D+L +R + E + Sbjct: 288 DWIEHDPQRLRAELLELKTTLREQIRELRRAIFALRPVQFDELGFVGGLRRYIVEFAGQH 347 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 ++ S + FRV QE L N+ KHA A+ V + + DE L +V+ Sbjct: 348 -NWDIDVDLTGTPSTIPPEIEAVAFRVVQEALTNVAKHAAATRVEVMIGRVDEGLQIVVR 406 Query: 451 DDGSGLPPGS---GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 DDG G PG+ GL MRER+ AL G L I GT + +P Sbjct: 407 DDGRGFDPGALPDAPGHVGLRQMRERLAALRGQLTILSRPGAGTELRAWIPL 458 >UniRef50_B1XZ31 Histidine kinase n=5 Tax=cellular organisms RepID=B1XZ31_LEPCP Length = 501 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 10/288 (3%) Query: 217 LPIIALAWHYGWQGALIATLMNAIALI--ASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ 274 L + +GW L + + + + + + + +L G+ L Sbjct: 180 LGYVVGLPRWGWMMGTGLYLDDIQVTLDQLERQGQANIWATMAWIAGIALLGISL-LSAC 238 Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA-GIVQRL 333 L + A+ Q +A ++++++E+ R ++RELHD GQT+ +I+ + L Sbjct: 239 ALALNLSEYRAADAQLQLMAHQVVQSQENERAHLSRELHDGTGQTLVSIKLLMDSAIGHL 298 Query: 334 AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGI 393 + + + + VR L RLRP LD L A+R L E E + Sbjct: 299 KRNLQAPPPTLDKARERIDEALSEVRTLSHRLRPTVLDTFGLPAALRYLGEEF-AEHAEL 357 Query: 394 VSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 + R E L E+ + LFR+ QE L NI +HA AS V L+ + L ++DDG Sbjct: 358 AFFMRLRGPEQTLPEDIKTVLFRITQEALTNIERHARASRVDLRLIFGPAGVRLTVQDDG 417 Query: 454 SGLPPGS----GQQGFGLTGMRERVTALGGTLHISCLHG-TRVSVSLP 496 G + ++G G MRER+ ++GG L + G TRV +P Sbjct: 418 VGYDTQALQLDPRRGIGQRNMRERMASIGGQLTVQSQPGSTRVIAQVP 465 >UniRef50_C1A5E7 Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E7_GEMAT Length = 558 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 91/378 (24%), Positives = 137/378 (36%), Gaps = 17/378 (4%) Query: 123 ALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWR 182 AL+Q + + LT LV Y + N W L P W Sbjct: 194 ALVQEMVEHASRFLKADGGYAGLTSVGEHGETRLVSTSYWSQNHWRRL-------PRTWA 246 Query: 183 GRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIAL 242 R + +L +L P + +R HY L + Sbjct: 247 RREGIPGRVLEHEFAYLTADYPADSARDQELVD-----HDGVHYAVCVPLRDASHQVVGF 301 Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 + + I+ R L +L + A + L + E Sbjct: 302 LELHRTIERAPFTWNDASFLEALADTTAMAIENSR-LVTALASKNAEVRQLFALHADRIE 360 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQR-LAADNASVKQSGQLIEQLSLGVYDAVRRL 361 R+ +ARELHD+ GQ + ++ ++ R L +D V+ + R+L Sbjct: 361 EERQHIARELHDEAGQALVGVKLALQVLSRVLPSDTPHVRAPLDELRLQVNQATARFRQL 420 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 RLRP LD L A+ L+ + E G G HLE + +FR+ QE Sbjct: 421 ARRLRPPALDQHGLAAALAQLVHDTEQRG-GFAVHLEVDGLDQRRFPLHETAVFRIVQEA 479 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTL 481 L N+ HA A+ V + + +RL++ + DDG G Q G GL G+ ER LGG Sbjct: 480 LTNVTAHAGATEVRVSVGETAQRLLVRVSDDGCGFDITRSQSGLGLRGIAERAHQLGGLC 539 Query: 482 HISCLHGTR--VSVSLPQ 497 ++ GT VSV LP Sbjct: 540 DVASQPGTGTVVSVQLPL 557 >UniRef50_UPI0001B54FA0 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54FA0 Length = 423 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 98/391 (25%), Positives = 141/391 (36%), Gaps = 31/391 (7%) Query: 135 KESWNALLLTLTGGLTLAPICLVFWHYLAN-NTWLPLGPSLVSQPINW----------RG 183 E W + G L LA ++ L + W R Sbjct: 29 AERWAGPVFAGVGILALAVCTIIAAGQPHGDPAQWRTTLLLAAASGLWLLVLIPVFPRRT 88 Query: 184 RHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALI 243 R + F++ L L L FT F IA A + L+ Sbjct: 89 RKPWLAIGFFLVLLAGATVLTSRLDPFTAFASVGYPIAFVLFPTRWSIFAAAATAVVPLL 148 Query: 244 ASQTWRDHPVDLLLSLLVQSL--TGLLLGAGIQRLRELNQSLQKELARN-------QHLA 294 A W+ P + +V + +GA ++ R N+ L + AR L Sbjct: 149 AKGLWQPSPPWITAVSIVGPILYVAWFVGAENEQRRRTNEKLAQTNARLETALTENAALH 208 Query: 295 ERLLETEE-----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ 349 +LL R+ +ARE+HD + Q +T I TQ R ++ + Sbjct: 209 AQLLTQARQAGVLDERQRMAREIHDTVAQGLTGIVTQLQAADRATEAADR-QRHLAHVHT 267 Query: 350 LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSEN 409 L+ RR + LRP L D L +A+ L + + G + D L Sbjct: 268 LAKDSLTEARRAVQALRPEPLADSHLPEALAGLANRVS-DTSGTKVTADVEGDARPLLPE 326 Query: 410 QRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS--GQQGFGL 467 VTL+RV QE L N KHA A+ + + + +ML I DDG G PG GFGL Sbjct: 327 LEVTLYRVAQEALANAEKHARANRIGITLTYTSDLIMLDIRDDGRGFAPGDRGDGTGFGL 386 Query: 468 TGMRERVTALGGTLHISCLH--GTRVSVSLP 496 MR+RV + G+L I GT V P Sbjct: 387 EAMRQRVQRVAGSLTIESARGEGTVVHAECP 417 >UniRef50_Q60AR7 Sensor protein n=1 Tax=Methylococcus capsulatus RepID=Q60AR7_METCA Length = 439 Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 12/296 (4%) Query: 206 ELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLT 265 E F +AL + + G ++ + + D+ L L + Sbjct: 141 EARGFLLLMVALAVTVYLVVHTTLGRAFKSVGIILEGLEDLENGDYSRRLPEFYLPE--- 197 Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 + +L+K N+ LA+R L +E RR +A+ELHD++GQ+++AI+ Sbjct: 198 ---FARISRAFNHTVGTLEKTREENRALAQRSLAIQEEERRYLAQELHDELGQSLSAIKA 254 Query: 326 QAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 A +++ D+ + I+ + ++ +R L+ RLRP LD+L L+ ++ ++ Sbjct: 255 IAASLRKPERDDRPNADAIGAIQSICDHLFAVLRTLMQRLRPLMLDELGLKASLEDMIEN 314 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW------ 439 I + R+ +FR+ QE L N+V+H+ A+ + + Sbjct: 315 WRGRYPSIALDFSCDDGIDECIGDARIHVFRIVQESLTNVVRHSGAAKLGIHLDLIEATG 374 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 ++ E L+L + DDG+G P G GL G+RERV +L G +S G V++ + Sbjct: 375 ERPEALLLEVSDDGAGFDPARVPAGLGLLGIRERVESLRGQFSLSTRPGAGVTLRI 430 >UniRef50_Q1D524 Sensor histidine kinase n=2 Tax=Cystobacterineae RepID=Q1D524_MYXXD Length = 427 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 85/399 (21%), Positives = 153/399 (38%), Gaps = 14/399 (3%) Query: 105 HQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLAN 164 Q + A A + +L G + GLT P V + + Sbjct: 36 EQAAASWEQDRFVARARALFYARMMFLTLGLLILAVPAWSGYFGLT-GPFSFVGYFAMLL 94 Query: 165 NTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAW 224 + L + W + + + L + + L L A Sbjct: 95 YSVANLLVIDHPKAGRWVTYITLCLDVTISVVLIAKPHVGGGLQSPLLATQLLFTTLFAI 154 Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLL--LSLLVQSLTGLLLGAGIQRLRELNQS 282 + A++ L+ + V + L+LL ++ + L E + Sbjct: 155 LFPKPLAILPPLLALPITTRLDLLLNRSVTAVELLTLLWYLALNFIIVYVLVYLNEREAA 214 Query: 283 LQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQ 342 +E+ Q + L R +ARE+HD +G +++++ Q+ + LA + +++ Sbjct: 215 AHREVVSLQGDLKELAVV--EERNRMAREIHDGLGASLSSMIIQSEYILNLARE-EGLRE 271 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 + ++ + + +RR L +R +D L Q + + G+ E Sbjct: 272 EIRELKLTAEESIEELRRSLRMMR----EDFELAQGLEDYAKTFRER-TGLDIRFERTGL 326 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 + L + ++ LFR+ QE L+N VKHA+A V ++ ++R+ LV+ DDG G P Sbjct: 327 QRKLDPDVQLALFRILQESLSNAVKHAEAKGVQVRLDFSEDRVNLVVRDDGKGFDPSRTP 386 Query: 463 QGF-GLTGMRERVTALGGTLHISCLHGTR--VSVSLPQR 498 +G GL MRER LGG L + G V+ SLP R Sbjct: 387 RGHYGLLNMRERAMKLGGQLIVDSSPGAGAQVAFSLPCR 425 >UniRef50_B1KE05 Histidine kinase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KE05_SHEWM Length = 287 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 17/273 (6%) Query: 233 IATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQH 292 + TL N I +QT+ V + ++V +GL L A ++L ++ + + Sbjct: 15 VVTLQNEINGYINQTFVVIFVLTVAGVVVVFFSGLFLQASERKLADV---------KLKA 65 Query: 293 LAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSL 352 L R+++T+E R+ V+RELHD I Q + + + + EQ Sbjct: 66 LTNRIVDTQEVERQRVSRELHDGIIQMLVSTKYVVENAIFRLDKGEVATKELTQCEQYLD 125 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 + VRR+ L P L+D L A+ +L+ + I E L + R Sbjct: 126 ATINDVRRISRDLHPNLLEDHGLSAALSALIEDYRNRL-NIDIAFEPLAINKLLPSDART 184 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ------GFG 466 TL+R+ QE L NI +HA A+ VT++ D +L I D+G+G + G G Sbjct: 185 TLYRIAQEALTNIERHAHATKVTVKVKVNDVWFILSISDNGAGFDTQKLSRNKSPFVGIG 244 Query: 467 LTGMRERVTALGGTLHISCL-HGTRVSVSLPQR 498 L M ER++ G L I GT+V LP++ Sbjct: 245 LRNMAERISYFNGRLDIYSASSGTKVVAKLPKK 277 >UniRef50_B2J8K5 Integral membrane sensor signal transduction histidine kinase n=6 Tax=Cyanobacteria RepID=B2J8K5_NOSP7 Length = 421 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 82/402 (20%), Positives = 161/402 (40%), Gaps = 26/402 (6%) Query: 117 AALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVS 176 L AL+ +P L + L+ L+ L+ + + + Sbjct: 21 ILLAITALIAVIPPPLRRFRPKLPELTICSLFPDLSICNLLPE--LSIYSLILFALMGLR 78 Query: 177 QPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL 236 P + + V Y ++ ++ + + + +R PF + + + G L T Sbjct: 79 LPKSSQTSK-VIYTVIEILLILITGLFGERFARLFPFLYIILVTRSCLIFNLPGRLFVTS 137 Query: 237 MNAIALIASQTWRDHPVDLLLS-----------------LLVQSLTGLLLGAGIQRLREL 279 ++ + + + +L S + + LL+ + R Sbjct: 138 LSFGLFLFTTQLKYQLFNLQASSQAQEKFRFLTLNWSLVFGLSLVFVLLMMNAVLSERHS 197 Query: 280 NQSLQKELARNQHLAERLL-ETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADN 337 + L + + A R+ + R +ARE+HD +G ++TA+ Q +L ++ Sbjct: 198 REKLAIANEKLREYAMRIENQATLEERNRIAREIHDSLGHSLTALNLQLETALKLWQSNP 257 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 + ++L + VR+ + +R L + +LE+AI +L GI+ Sbjct: 258 GKAETFLATAKELGSKALNDVRQSVSTMRSNPLQEQSLERAIANLAENFH-RSNGILPIC 316 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + ++ +L ++R+ QE L NI K+A A+ V L+ L L+I+D+G G Sbjct: 317 QINLEY-SLPPEINTAIYRITQESLTNITKYAYATEVKLELATIRGNLRLIIQDNGRGFD 375 Query: 458 PGSGQQGFGLTGMRERVTALGGTLHISCLHGTR--VSVSLPQ 497 G GFGL MR+R ALGG +I+ G+ ++V++P Sbjct: 376 LGQNTTGFGLHSMRDRTLALGGDFNINSTPGSGCKITVNIPL 417 >UniRef50_Q5P5H6 Two-component sensor n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5H6_AZOSE Length = 421 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 7/230 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 + + L + + + + E E + +ARE+HD++GQ +TA++ + + Sbjct: 187 QDVTAGNRAKKKLIESERFLRETCKHVEEVREEEKASIAREIHDELGQLLTALKMEVFCI 246 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 + + + + + L + VR + LRP+ L+ L L A+ L+++ + Sbjct: 247 KPGRSHDVELMSKADAMGVLIDSIIVRVRDIATALRPKVLE-LGLVVAVEWLLQDF-MRR 304 Query: 391 RGIVSHLEWRID--ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 GI L + ++L +Q + LFR+ QE L N +H+ AS V + + + LV Sbjct: 305 SGIHCQLHLEDEGVVNSLGSSQTLALFRILQESLTNAARHSKASNVGVWLARNGKFAELV 364 Query: 449 IEDDGSGLPPGSGQ---QGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 IEDDG G P +G GL G++ER LGG I G V + + Sbjct: 365 IEDDGVGFDPSGSDDQLRGLGLRGIKERTILLGGRFEIGSRRGAGVKLKV 414 >UniRef50_Q0S9L9 Sensor kinase, two-component system n=8 Tax=Actinomycetales RepID=Q0S9L9_RHOSR Length = 490 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 77/416 (18%), Positives = 146/416 (35%), Gaps = 20/416 (4%) Query: 97 VALISRYRHQRDWRTLLLQGAALTAAALL----QSLPWLWHGKESWNALLLTLTGGLTLA 152 V SR+ L + L L ++ G + L+ + + Sbjct: 78 VGWNSRWSKVGCAFRLSMDAGFARVDKLGGVHRSPLTPVFAGLQLGLHALIAALTAVVIL 137 Query: 153 PICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTP 212 L L + V R W+L + L + + Sbjct: 138 RAVLPDAPQAPAIVVLSVAFLAVYAVGATRRLRGTWWLAALTALWVALMVLAPDAAYLAF 197 Query: 213 FCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAG 272 L + L + G L +A++ + R V ++ ++ + + +G G Sbjct: 198 GLFFLYLHLLPRRW---GVLAVAAATVVAVVGTGMHRGWSVAGVVGPVIGACVAVAIGLG 254 Query: 273 IQRLRELNQSLQKELARNQHLAERLLETEES-----VRRDVARELHDDIGQTITAIRTQA 327 + L + + L E E + R +ARE+HD + Q +++I+ Sbjct: 255 YRALYREAVERDRLIGELTRTRAELAEQERAAGSLAERERLAREIHDTVAQDLSSIQMLL 314 Query: 328 GIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 +R A D+ + +L + + R+L+G L P LD +L A+ + + Sbjct: 315 HAAERAAPDHP-ARDRIRLARETAADSLAETRQLIGDLTPAVLDGQSLADALARICT--Q 371 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + L L R+ Q ++N+V+HA +S + + ++ + L Sbjct: 372 ARSDTFDTIAVVEGEPVRLPMPVEAALVRIAQGAVSNVVRHAHSSRMAVTLTYYEDAVRL 431 Query: 448 VIEDDGSGLPPG----SGQQGFGLTGMRERVTALGGTLHISCLHG-TRVSVSLPQR 498 + DDG G + FGL +R RV L G++ + G T V+VS P Sbjct: 432 DVVDDGIGFDAELLDREPSKAFGLNSIRRRVELLDGSMSVESEPGLTAVAVSFPLE 487 >UniRef50_C4DRB4 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRB4_9ACTO Length = 422 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 90/337 (26%), Positives = 139/337 (41%), Gaps = 23/337 (6%) Query: 181 WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFC---LALPIIALAWHYGWQGALIATLM 237 W + L + F+ ++ L L F + +AL + + G ++ +L+ Sbjct: 88 WPEQSLAHMAVYFLGAIALLAALRSRDEVFVIAVSGFFPMAFVALPGAWAYPGVVLLSLL 147 Query: 238 NAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ-------RLRELNQSLQKELARN 290 + W+ + LL V +GA ++ R RE+N L N Sbjct: 148 T-VPEAPRGLWQGLTLGDLLFPTVGVAVASFIGAMMRTVEREAIRRREVNARLVALADEN 206 Query: 291 QHLAERLLETEES-----VRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQ 345 L RL+E R +AR++HD + Q + I TQ + AD + + Sbjct: 207 AALQARLVEQARQAGVTAERARLARDMHDTVAQGLAGIVTQLETAE---ADPDDTARRLR 263 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 + L+ VRR + LRP LDD L +A+ + I + Sbjct: 264 IARDLARDSLVEVRRSVAALRPALLDDADLAEALAREVDAWRHRN-DIAATFTVTGTPVP 322 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS-GQQG 464 L + RV QE L+N +HA AS + + ++ L+L I DDG G + +QG Sbjct: 323 LDAAVDEAVLRVAQEALSNTARHAKASRLGVTLSYMEDMLVLDIRDDGEGFAVDAEPRQG 382 Query: 465 FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRY 499 FGLT MR+RV L G++HI GT VSVSLP Sbjct: 383 FGLTAMRQRVEQLDGSVHIESKPGAGTAVSVSLPLDG 419 >UniRef50_Q74GJ3 Sensory box histidine kinase n=1 Tax=Geobacter sulfurreducens RepID=Q74GJ3_GEOSL Length = 830 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 120/275 (43%), Gaps = 12/275 (4%) Query: 230 GALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELAR 289 G ++AT ++ ++ +LL L+ Q L L L ++ A Sbjct: 555 GTVLATFIDITERRLAEDELHRHRELLEELVHQRTAELKLRNM--ELASEIAERRRAEAA 612 Query: 290 NQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS--VKQSGQLI 347 + RL E EE +R+ +A ELHD+IG+ +TA+ ++ +K + Sbjct: 613 LRCYTRRLTEMEEDLRKKLAAELHDEIGRDLTALNLNFSVIGNRLVQGPDGCLKARIEDT 672 Query: 348 EQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALS 407 E+L + VR L +LRP LDD L A+R GI + + Sbjct: 673 ERLIEDISRTVRGLTAKLRPPVLDDYGLPAALRWHADLFS-RRTGIEVTVRGADSVPRMP 731 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ---- 463 + + LFR+ QE L N KHA+A V + D R+ L + DDG G P S Sbjct: 732 AEKEIALFRIVQEALTNCSKHANAGNVKVSLDHGDGRVRLSVVDDGIGFAPESASPTPAG 791 Query: 464 -GFGLTGMRERVTALGGTLHISCLH--GTRVSVSL 495 G+GLT MRER +GGT ++ GT ++V + Sbjct: 792 SGWGLTIMRERAELIGGTFRLNTAPGKGTVLTVEI 826 >UniRef50_Q1AVR5 Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR5_RUBXD Length = 407 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 82/407 (20%), Positives = 142/407 (34%), Gaps = 31/407 (7%) Query: 103 YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYL 162 R + R L A+ + + + G+ + G L + L + Sbjct: 14 ARMGPEGRRGALLMRAVGFSYVGATYVLYLSGEREF--------GVLPVTAAFLAAAFLM 65 Query: 163 ANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIAL 222 W + R R L V L +++ + F +A + Sbjct: 66 KVMPWERCDAA--------RVRLLAVPAFALVSFLIVRMTGLGFSAGFFYAAVANGVFVF 117 Query: 223 AWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGA------GIQRL 276 + G A L+ ++ + R L + ++G ++R Sbjct: 118 GFRRGMAYAGFIMLLLFGDILWAHPQRGVLWALEQAASWSWPLAFVIGICTLAVESMRRQ 177 Query: 277 RELNQSLQKELARNQHLAERLLETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQR 332 + L + + L E R +ARE+HD +G +T + Q + Sbjct: 178 AHAQELLAELEEAHAELRRYAERARELAVSEERNRIAREIHDAVGHHLTVVNVQLEAAGK 237 Query: 333 L-AADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGR 391 L A D ++ + + RR + L+P ++ +A+ L+RE G Sbjct: 238 LLARDPGRAAEAVARAKSSASEALSEARRAVRALKPPSMEGRAGLRALDDLVREF--HGS 295 Query: 392 GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIED 451 G+ E + L L+R QEGL N ++H+ A V ++ E + L + D Sbjct: 296 GVAVSFEVSGERRPLPPEVEFILYRALQEGLTNALRHSGADRVEVRLDLCGEAVRLSVRD 355 Query: 452 DGSGLPPGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLP 496 DG G G+ GFGL G+RERV GG + G + V LP Sbjct: 356 DGRGTSEGASGGGFGLEGLRERVAEAGGRISAGDARGGGFALEVELP 402 >UniRef50_A5GBT2 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBT2_GEOUR Length = 610 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 91/460 (19%), Positives = 161/460 (35%), Gaps = 50/460 (10%) Query: 72 YWLTQAVGLT------HFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALL 125 WL + + P+ ++ +L L+ VA ++ R Q A AL Sbjct: 154 VWLGEPFSIQKHFVMMQLPVAILAALFILVGVASLAAARFFTSTSRA--QLTAFAQTALG 211 Query: 126 QSLPWLWHGK--------ESWNALLLTLTGGLTLAPICLVF--------------WHYLA 163 + L L+ L + C F + L Sbjct: 212 AGCYLFSESTICQMVIDPPVLASYLHYLSFFLFVTGFCRYFEPLTGGVNRTITTRIYQLF 271 Query: 164 NNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALA 223 L +S ++W + L+ V+ W + + + + A I A Sbjct: 272 AVYPLLATLLDLSDLVSWDISFSLALQLVMVVVCWFAILICSPRFKTSAPRDAALIRAAF 331 Query: 224 WHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSL 283 G A + +P LL+ + V L L + L+ Sbjct: 332 IPLFIAGLFDAA---TGLQLIGSGPLLYPWGLLVLMCVLFYRVLALDREEREAARLSLEK 388 Query: 284 QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AADNASVKQ 342 + + RR +AR++HD + Q + + +A + + L ++ + + Sbjct: 389 SRRAEE---------TAIDEERRRIARDIHDGVAQDLAMMNMRASVWEHLVHSNREKMTE 439 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 +L +L VRR + +RP +LD+L +A+ ++E + G+ LE D Sbjct: 440 EIKLFRKLLHKNIGEVRRAIFAMRPVELDELGFSEAVGRYVKEFG-QYTGLRIDLEMAGD 498 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ-DERLMLVIEDDGSGLPPGSG 461 A+ + L+R+ QE LNNI KHA A+ ++ L + I D+G G + Sbjct: 499 -IAMPRQLELELYRIIQESLNNIAKHAGATEAGVRISDDVAGCLTVSIADNGKGFDLSAL 557 Query: 462 QQG--FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 Q GL M+ERV GT I G +++ P Sbjct: 558 AQSPRLGLRQMKERVERRNGTFLIDSGPGRGAAITICFPI 597 >UniRef50_C7QZV7 Histidine kinase n=3 Tax=Micrococcineae RepID=C7QZV7_JONDD Length = 422 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 94/381 (24%), Positives = 151/381 (39%), Gaps = 25/381 (6%) Query: 140 ALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWL 199 LL+ + + F+ + W + L+ P R R+ V + L +L Sbjct: 39 VLLIGVPLAVATGRGSEWFFGFDTIGAWSGVFAFLMLAPFALRHRYPVPVVALVFTVAFL 98 Query: 200 QLGLPDELSRFTPFCLALPII---ALAWHYGWQGALIATLMNA-IALIASQTWRDHPVDL 255 + L L + + + A +G + AL+A+ + A RD + Sbjct: 99 HMLLGPPLPPAAVVAVPIALYNTAAHGPVWGHRVALVASFLGASFFAFLMADGRDRFATI 158 Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE----SVRRDVARE 311 + SL + + R ++ RN+ L +E + R +ARE Sbjct: 159 VFLFFTLSLLFFAVWSLGLMRRARIAHIRALSDRNRALESEQDRQKELGAVAERTRIARE 218 Query: 312 LHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR---- 366 +HD + +++ + QA + A + + I + +RRLLG LR Sbjct: 219 MHDIVAHSLSVMIAQADGGRYAAATNPDLAATALTTIAETGRAALADMRRLLGVLREGDS 278 Query: 367 PR----QLDDLTLEQA---IRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQ 419 P L +LT + A + SL+ ++ G+ L L +T++RVCQ Sbjct: 279 PPGAGTSLGELTPQPAEESLESLVNQI--RASGVRVSLIRMGQPRTLPPGAGLTVYRVCQ 336 Query: 420 EGLNNIVKHADAS-AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALG 478 E L NI+KHA VT+ L L IEDDG G+ + QG GL GMRER G Sbjct: 337 EALTNILKHAGPDPTVTVHITWAATSLTLTIEDDGRGVAAANDGQGMGLLGMRERAALFG 396 Query: 479 GTLHISCLH--GTRVSVSLPQ 497 G + G RVS++LP Sbjct: 397 GDVTTGPRPGGGFRVSLTLPL 417 >UniRef50_C0GH42 Multi-sensor signal transduction histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH42_9FIRM Length = 651 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 9/232 (3%) Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQR 332 Q + + +K Q E + +E R ++RELHD Q++ + Q + Sbjct: 409 QHIAKDITEERKLHENQQFYIEHITRAQEEERLRISRELHDSTAQSLIVVLHQLEKYLVS 468 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 + + + + VR+ LRP LDDL L ++ + E+ G Sbjct: 469 SDHLRLGDSRFLFNVAEQVKAILQEVRQFSRDLRPSILDDLGLVPSLEWYIDELN-RTHG 527 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 + L + L RV+LFR+ QE L N+++HA+A+ ++ + + +V++D+ Sbjct: 528 LKVDLNIIGQKQMLRPEIRVSLFRIIQEALRNVMRHAEANNAKVKIEFDNNEVRVVVQDN 587 Query: 453 GSGLPPGS----GQQG-FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G G + G GL GM ER LGG++ IS GT + +++P Sbjct: 588 GKGFDAEPLGDLLRNGKLGLAGMHERAKILGGSIEISSAKGAGTTIFIAVPL 639 >UniRef50_A7NRQ7 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRQ7_ROSCS Length = 682 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 11/298 (3%) Query: 207 LSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTG 266 R T +AL I A W L + +D+ + + G Sbjct: 386 TVRNTLLIMALFFIGAAAVTLWLSQRFLARPMTDMLSGVRAITAGNLDVSVPVTSNDELG 445 Query: 267 LL---LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAI 323 L L + L + A Q ++ R+ +ARELHD + Q + I Sbjct: 446 ELAASFNQMTDELNRRTRELAQTSAELQLKETQVKMAALEERQRLARELHDSVSQALYGI 505 Query: 324 RTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSL 382 A Q +L D A + + + I L+ +R L+ LRP L L A+ Sbjct: 506 ALGARTAQTQLERDPARLGEPLEYILSLAEAGLSEMRALIFELRPESLQTEGLVAALTKQ 565 Query: 383 MREMELEGR-GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ 441 + + +V+ + E +S + L+R+ QE ++N+ +HA A+ V L Sbjct: 566 SDALRARHKLDVVTRFD---PEPEISLEAKEALYRIAQEAMHNVARHAHATRVELSLLNA 622 Query: 442 DERLMLVIEDDGSGLPPGSG-QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 D L L I D+G G P GL M ER +GG HI GT ++V++P Sbjct: 623 DGALTLEIRDNGKGFDPAQPYPGHLGLKSMPERAAHIGGAFHIESRPGAGTVITVTVP 680 >UniRef50_C3PKA7 Two-component system sensor kinase n=2 Tax=Corynebacterium RepID=C3PKA7_CORA7 Length = 419 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 68/373 (18%), Positives = 132/373 (35%), Gaps = 19/373 (5%) Query: 136 ESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINW-RGRHLVWYLLLFV 194 LL+ P+ + L ++ + + R W ++L V Sbjct: 50 VLTATLLVVAIFTTVRLPLWQGVLNLLLLVSFAVVYFGGSAYLEALPRVARYGWMVILTV 109 Query: 195 ISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVD 254 + L P + + +I + + + Q Sbjct: 110 LWLADLAVAPAAIYLVFSLYFVYLYVLEMIP-----GVICVIAATVMTVLVQIPGGLSFG 164 Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 ++ V ++ + + + L +NQ L K ++ T + R+ +A E+HD Sbjct: 165 GIMGPAVSAMVTIAITYAFRALSSMNQELVKTRSQLVESERTAGMT--AERQRIAHEIHD 222 Query: 315 DIGQTITAIRTQAGIVQRLA--ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD 372 + Q +++I+ R D ++ +L + + R ++ L+P L + Sbjct: 223 TLAQGLSSIQMLLHAADRDLDQEDIPKAQERIELARRTAADNLHEARAMIAALQPAALSE 282 Query: 373 LTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 +L A+ + G G+ ++ D L L R+ Q + N+VKHA AS Sbjct: 283 TSLGAAMTRMADNFAATG-GVDVSVDVEGDTQQLPMKVEAALLRIAQGAMGNVVKHAHAS 341 Query: 433 AVTLQGWQQDERLMLVIEDDGSGLPPGSGQ------QGFGLTGMRERVTALGGTLHISCL 486 + + + + + D+G G + + GL+ MR R LGG + I Sbjct: 342 KARVTVTYAPDEVRVDVVDNGQGFDVSAVENKPAGLGHIGLSAMRRRAEELGGEVVIEST 401 Query: 487 H--GTRVSVSLPQ 497 GT VSVS+P Sbjct: 402 PGSGTAVSVSVPL 414 >UniRef50_A5EGA4 Bacteriophytochrome n=13 Tax=Rhizobiales RepID=A5EGA4_BRASB Length = 783 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 12/296 (4%) Query: 213 FCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLG-- 270 LA L L+ + Q R+ + S L Sbjct: 489 LVRLHASPWLAAEVEAAHRLRVALLEVVLRRIDQLAREREAARQRQERLTSELNERLAQS 548 Query: 271 -AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGI 329 + LR+ + + R + +E+ R+ +ARELHD +GQ++T ++ Sbjct: 549 ERLARALRKETELRAAVEGDLTQVLRRTVADQETERQRIARELHDTLGQSLTMLQLGLQA 608 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 + A ++Q I+ ++ + V R+ +RP +DDL L++AI SL+ E Sbjct: 609 IGHEIAGGPKLQQRFDGIKTIADSLGRDVHRIATEIRPSAIDDLGLQKAIESLLETWS-E 667 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 + +L + L + TL+RV QE L N+V+HA+A V + D + +++ Sbjct: 668 NAALNYYLHLSPKDMRLPKAIEATLYRVLQETLTNVVRHAEARKVGVILNVTDREVSMIV 727 Query: 450 EDDGSGLPPGSGQQ------GFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 EDDG G P + GL G+RER+ +GG+L I GT V +P Sbjct: 728 EDDGRGFPADADDPTASPAMRLGLLGIRERLALVGGSLEIESSPGRGTTVFARVPL 783 >UniRef50_B9TCE7 Sensory transduction histidine kinase, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TCE7_RICCO Length = 358 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 6/235 (2%) Query: 266 GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRT 325 G+ + RE L++ + LA R E R+ +ARELHD++GQ +TA+R Sbjct: 111 GVAFVVDLTGRREAEHRLRESYEMLRELASRRETDREDERKHIARELHDELGQHLTALRM 170 Query: 326 QAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMR 384 +A ++ +L + ++ + + L VR ++ LRP LD + + A+ L Sbjct: 171 RASTLRMQLENHHPALVDETRSLIALVDQTMQVVRSVITSLRPPVLD-MGIAAALEWLAA 229 Query: 385 EMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDER 444 E GR + HL R + +SE+ + LFRV QE L N+ +HADA+ V + ++ Sbjct: 230 EFNRNGRTL-CHLLMRDENIEMSEDHAIVLFRVVQEALTNVTRHADATEVIITLDRRPNA 288 Query: 445 LMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 +L + DDG G + + + FGL GM ERV GG + I GT V V LP Sbjct: 289 CLLEVLDDGQGFDVQATRSKSFGLAGMEERVLMHGGKIAIISSPRIGTLVKVDLP 343 >UniRef50_Q3M1D8 Serine/threonine protein kinase and signal transduction histidine kinase with GAF and PAS/PAC sensor n=9 Tax=Bacteria RepID=Q3M1D8_ANAVT Length = 2361 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 5/198 (2%) Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN-ASVKQSGQLIEQLSLGVYDAVRRL 361 R +ARE+HD + Q T I Q G +++ D+ + + LI++L+ RR Sbjct: 2162 EERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDVEAAQAHLDLIKELARTGLTEARRS 2221 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 + LRP+ L++ +L+ A+ L+ ++ + E +L L R+ QE Sbjct: 2222 VIALRPQLLEEGSLQSALHRLVAQIRAAATDTTLYYEIEGAVYSLPTEVENNLLRIGQEA 2281 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGG 479 L N +++A+A + ++ ++ L + D+G G G S +GFGL GM ER +G Sbjct: 2282 LTNAIRYANADEIRVELVYDRDQFCLRVRDNGQGFGVGSISASEGFGLLGMSERAERIGA 2341 Query: 480 TLHISCLH--GTRVSVSL 495 L I GT + V++ Sbjct: 2342 QLTIRSQPGQGTEIIVTV 2359 >UniRef50_C7LUF4 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF4_DESBD Length = 420 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 7/260 (2%) Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESV 304 Q WR D+ + + +R+RE L+ R + L+ L + E Sbjct: 156 FQGWRLSLRDVTERVQARMFLDQARQNLEERVRERTAELELSRERYRALSGYLQDRIEKE 215 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK-QSGQLIEQLSLGVYDAVRRLLG 363 R ++RE+HD +GQ +TA+ ++R D + + L G VRR+ Sbjct: 216 RAHISREIHDVLGQDMTAMNMGLHRLERSFQDTGDARLAQVVELRALVAGTLQTVRRISR 275 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 LRP LD+L +A+ +R + G+ L +++RV QE L Sbjct: 276 ELRPPMLDELGFAEAVAWQIRTF-AQASGLRVDQHIEG-IPDLPAALATSMYRVLQECLT 333 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGL--PPGSGQQGFGLTGMRERVTALGGTL 481 N +H+ + + + L++ + D+G G+ GL GMRERV GGTL Sbjct: 334 NAARHSGGNRLHVAVQAAKGELVMRVADNGRGITKAQADASGSLGLLGMRERVRLAGGTL 393 Query: 482 HIS--CLHGTRVSVSLPQRY 499 + GT V V +P Sbjct: 394 TVDRLPKGGTEVVVRVPLAG 413 >UniRef50_UPI00016C46BE putative PAS/PAC sensor protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46BE Length = 656 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 24/292 (8%) Query: 229 QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA 288 +G + + N + ASQ + + D+ +S G +R++E L + Sbjct: 356 RGIEVEFVSNVYDVGASQVIQCNIRDVTARKRAESALRTAHGELEERVQERTAELARAND 415 Query: 289 RN--------------QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 + L RL +E RR +ARELHD +GQ +T + +V+ + Sbjct: 416 ALTAEIARRERAEAERRDLQRRLATVQEDERRRIARELHDQLGQHLTGLGLGLKVVKDVT 475 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 + ++ L+ + V +L LRP LDD LE A+ + + E G+ Sbjct: 476 PRPSPAWDRLHELQLLTDRMGGEVHQLALELRPTALDDFGLETALANYIEEWGGRA-GVQ 534 Query: 395 SHLEWRI-DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDG 453 + L L+RV +E L N++KHA A V++ + ++ ++EDDG Sbjct: 535 ADFHASGLGAGRLPATTETALYRVIREALANVLKHARAGRVSVVLQGAADAVVAIVEDDG 594 Query: 454 SGLPPG------SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +G G+ GMRER+ LGG L I GT V +P Sbjct: 595 TGFESEPGPAGAPAGPRLGILGMRERLELLGGNLTIDSRPGRGTTVIARVPL 646 >UniRef50_D1ABJ2 Histidine kinase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ABJ2_THECD Length = 373 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 79/283 (27%), Positives = 124/283 (43%), Gaps = 12/283 (4%) Query: 229 QGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA 288 +GA + L + A IA R L + + L + R L + ++E + Sbjct: 92 RGAALPVLADRRATIAVIDVRSAGPCRQEDLDLVTALAALFAPVLHSCRRLRNAQEREHS 151 Query: 289 RNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA--SVKQSGQL 346 + AER +E +E+ R + R++HD I Q + ++ ++ A A + L Sbjct: 152 AER-FAERAVEVQEAERARLVRDIHDGIAQRLASLGFHLSACEQALAQGATAEAQAQLGL 210 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID-ESA 405 +L R +G LRP LDDL L A+ +L RE + + + E A Sbjct: 211 ARELCDLAAAETRAAIGGLRPPVLDDLGLTAALATLAREAGSRQPSLDVTVTVSGELEDA 270 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG------LPPG 459 L ++ + L+R+ QE + N ++HA AS V + D+R+ L + DDG G G Sbjct: 271 LPDHIQTALYRIAQEAVGNCLRHAKASVVHVLLEHDDDRVRLRVSDDGVGFSIQDVFAAG 330 Query: 460 SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRYV 500 +GL GM ER LGG +HIS GT V +P R Sbjct: 331 RRPDSYGLRGMSERAELLGGRVHISSRPGGGTTVEALVPLRRA 373 >UniRef50_A1WDW7 Multi-sensor signal transduction histidine kinase n=14 Tax=cellular organisms RepID=A1WDW7_VEREI Length = 468 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 7/277 (2%) Query: 227 GWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKE 286 G + IA + + L + VQ + + L +++ Sbjct: 191 RQIGQSLMLSRIGIATVTLIGLCAFYMYLRQTRAVQQVGQREQEMLERERDRLEGLVRER 250 Query: 287 LARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQ 345 A LA L + E R +ARELHD++G +TA + ++ +L A + + Sbjct: 251 TATLSELANHLQQVREQERGHLARELHDELGALLTAAKLDVARLKSKLDAAAPDIAERLA 310 Query: 346 LIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESA 405 + Q RR++ LRP L +L L A+ L RE +E ++ Sbjct: 311 HLTQTLNSGIALKRRIIEDLRPSSLSNLGLTAALEILTREFAGHAG---IEVETSLESVQ 367 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS-GQQG 464 L E ++T++R+ QE L NI K+A A V + + + + DDG G P + Sbjct: 368 LPEAVQLTVYRMVQEALTNIGKYAKAQQVLVSVHAHPGHVAVQVRDDGQGFDPAALPPTS 427 Query: 465 FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRY 499 GL GMR RV A GG L I+ GT +S LP R Sbjct: 428 HGLAGMRHRVEAAGGRLSITSRPGGGTLLSAILPLRA 464 >UniRef50_A5FS37 PAS/PAC sensor signal transduction histidine kinase n=5 Tax=Dehalococcoides RepID=A5FS37_DEHSB Length = 357 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 113/229 (49%), Gaps = 11/229 (4%) Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-QRLAA 335 R++ + L++ + + ++ +E+ R+ ++RELHD++ + + + + ++ Sbjct: 121 RDITEELRR-QQNMKSFVQDVIRAQEAERKRISRELHDEVAPLLLLLMQKIDNLSKQSER 179 Query: 336 DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVS 395 D A K + S +++RR+ LRPR LDDL L A+ L ++ +G+ I + Sbjct: 180 DIADCKPQLDALRTQSEEALESLRRIAQDLRPRILDDLGLIPALEWLTEKLAQDGQ-IHT 238 Query: 396 HLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 + E L+ ++ +FR+ QE NNI KH+ A+ V L+ + + ++L I+D+G G Sbjct: 239 ESNVKGREVELTAEIQLLIFRIAQEAFNNIRKHSLATWVRLELEFKPKAILLTIQDNGKG 298 Query: 456 LPPG------SGQQGFGLTGMRERVTALGGTLHI--SCLHGTRVSVSLP 496 + GL GM ER +GG +HI GT V +P Sbjct: 299 FNLSEQTDNLAQNGKLGLAGMHERAQLIGGHIHILTHPGQGTTVIAEVP 347 >UniRef50_B3E9K4 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K4_GEOLS Length = 395 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 6/232 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 L + + LQ+ R L+ L + E RR +AR++HDD+GQT+TA+ + Sbjct: 158 LHQHTSEMEAQGRRLQESNRRLSLLSAHLEKVREDERRSIARDIHDDLGQTLTAMHLEIT 217 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 + + +++ V+R++ +RP+ L++L LE A+ SL +E+ Sbjct: 218 AMLHADNVID-LTPRLCDLKKQVDAAIGTVQRIISTMRPQVLEELGLEAALESLAQEVRK 276 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 I + +S+ L+RV QE L N+ +H+ A+ V L ++D L L Sbjct: 277 R-TNITCVTSCTLAGEPISQEVASCLYRVAQESLTNVFRHSKATKVLLTVRRRDGWLQLQ 335 Query: 449 IEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 I D+G G+ FG+ GMRERV GG+ IS GT V +P Sbjct: 336 IRDNGVGVSEAQTAASNAFGVMGMRERVARCGGSFSISPRVGGGTIVEAQVP 387 >UniRef50_Q9KDL3 Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans RepID=Q9KDL3_BACHD Length = 351 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 22/339 (6%) Query: 179 INWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFC----LALPIIALAWHYGWQGALIA 234 + W+ + F + + + D+++ T + LPI+ LIA Sbjct: 10 LQWQFIRNSLIVSFFAVLFTVVIMTYDDIAGLTMLFDKQIVRLPILVPILLSMIAIGLIA 69 Query: 235 TLMNAIALIASQTWRDHPVDL----LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARN 290 +M ++ + H V L S ++S L RL + + +++++A Sbjct: 70 GMMQSLPIKRKLDQILHGVLLYERGTFSHQIESEGEDELAELTDRLNRMAERVEEQVASL 129 Query: 291 QHLAERLLETEE--------SVRRDVARELHDDIGQTITAIRTQAGIVQR-LAADNASVK 341 Q L+ + +E R+ +AR+LHD + Q + AI +++ L V+ Sbjct: 130 QRLSSERAKMQETVKKAAVTEERQRLARDLHDAVSQQLFAISMMTAAIKQNLHEATEEVQ 189 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 Q ++E+++ +R LL LRP +L+ +L+Q + L+ E+E + +G Sbjct: 190 QQMDVVEKMANTAQAEMRALLLHLRPAELEGKSLQQGVEYLLHELE-QKQGFKITKRLE- 247 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG-S 460 L + LFR+ QE ++NI++HA A V ++ WQ + ++ L + DDG G Sbjct: 248 PMDELPKGVEDQLFRMLQEAISNILRHAQAHHVEVRFWQTERQVRLKLIDDGVGFDVQKE 307 Query: 461 GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +GL M ER+ +GG L I GT++ +P Sbjct: 308 THGSYGLQTMHERINEIGGVLDIVSAPGKGTQLEAKIPI 346 >UniRef50_C8WS09 PAS/PAC sensor signal transduction histidine kinase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS09_ALIAD Length = 348 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 94/221 (42%), Gaps = 8/221 (3%) Query: 280 NQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS 339 + KEL L LE +E R+ +++ELHD + Q++ A+ ++R A Sbjct: 128 RERQAKELEMRARLNRMTLEVQEQERKRISQELHDGVSQSLYAVDLGMEHLKRQA--PPR 185 Query: 340 VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 + ++ + VR L L P L DL L AIR L EM G I L Sbjct: 186 LHRALDDLRAQVKRCSQEVRALSHTLYPSLLYDLGLSAAIRMLSDEMSTSGCRIEVSLNK 245 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG 459 L + ++R+ QE ++N + H A + + E + I DDG G Sbjct: 246 EWPGGDLG-GIAIHVYRIVQEAVHNAISHGRARHIQIHMTC-AEMCEVEIRDDGCGFDAD 303 Query: 460 SGQ--QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 + G+GL MRER +AL G L I GTRV V P Sbjct: 304 QIKLLPGYGLKNMRERASALHGVLEIESQPGQGTRVRVIFP 344 >UniRef50_C0A3D8 Signal transduction histidine kinase-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3D8_9BACT Length = 459 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 9/254 (3%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 L ++ + T L R L + ++ + + ++ ++L +E R+ ++RELHD Sbjct: 205 LEEEIVRRQATETALKKSELHTRRLLEQSRQLQEKLRRISHQILTVQEDQRKKISRELHD 264 Query: 315 DIGQTITAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 +I Q + I + A + ++++ + +L V R LRP LDDL Sbjct: 265 EISQLLVGIIVHLVNFTKEAELNPDRIRKTITPLRRLVEKSVLTVHRFARELRPAMLDDL 324 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L A+R+ + +G D L ++R L+RV QE L N+ +H+ A Sbjct: 325 GLIPALRAYIDSFH-RKKGRCIRFMASTDADVLDNDRRTVLYRVAQESLVNMARHSQARV 383 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGSGQ-----QGFGLTGMRERVTALGGTLHISCLH- 487 VT++ + R++L I DDG Q GL GMRERV +GG + Sbjct: 384 VTVRLLKIGGRVILEISDDGKAFDVARLTSARWNQRLGLVGMRERVEMVGGRFSVESAPG 443 Query: 488 -GTRVSVSLPQRYV 500 GT V +P + + Sbjct: 444 AGTTVRAEVPVQDI 457 >UniRef50_C2C0V0 Possible histidine kinase n=5 Tax=Listeria RepID=C2C0V0_LISGR Length = 358 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 17/338 (5%) Query: 174 LVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALI 233 + S + + + F+ ++ + L + + PF + +PI ++ + Sbjct: 9 IYSTALLFAASLIGTIAYYFMSNITIYQLLIGQKVFYVPFVIFVPITVISVGVVIGALIG 68 Query: 234 ATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLL-LGAGIQRLRELNQSLQKELARNQH 292 + + I DL +L ++ + Q++ L + +Q + AR Q Sbjct: 69 YYIKQKLEGIDISLRLLEQGDLEKNLAIEKEESFAEIQQVYQQINRLRKKMQLQNARTQE 128 Query: 293 LA----ERLLETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN--ASVKQ 342 +A E +++E R +ARELHD + Q + A + N ++++ Sbjct: 129 IASGYAETAGQSKEAILVEERHRIARELHDSVSQQLFAAMMLLSALNEQGEKNATPAMQK 188 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 +L+E + +R LL LRP QL+ +L+ + L++E+ + I + W I Sbjct: 189 QLKLVESIVNDSQSEMRALLLHLRPTQLEGKSLKVGMEQLLQELTAK---IPIEVRWEIA 245 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS-G 461 + AL + LFR+ QE L+N ++H+ A+ + ++ D+ +L + DDG G G Sbjct: 246 DIALKKGIEDHLFRIVQELLSNTLRHSKAALLEVRLAIVDQVAILKVVDDGVGFNVGEVA 305 Query: 462 QQGFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 Q +GL MRERV GGT+ I GT V V +P Sbjct: 306 QGSYGLQNMRERVEEFGGTIKIISFPNQGTSVEVKIPL 343 >UniRef50_D1Y8Y4 Histidine kinase n=2 Tax=Propionibacterium acnes RepID=D1Y8Y4_PROAC Length = 456 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 85/383 (22%), Positives = 146/383 (38%), Gaps = 27/383 (7%) Query: 142 LLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQP-INWRGRHLVWYLLLFVISLWLQ 200 L + +T+AP + + L S+V + R H + + L I +Q Sbjct: 71 LTLIMAVVTIAPYLVSLVEWPRPEYIAALLSSMVMVASLPMRREHPLLMMTLVAIGAAIQ 130 Query: 201 LGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRD---------- 250 W G Q + + ++I W Sbjct: 131 FFFVPFPVLSIFVVPIASYSVARWVDGHQSRWVLWVGAVGSVIGPMRWIPTIAAGYDPSS 190 Query: 251 --HPVDLLLSLLVQSLTGLLLGAGIQRLRELN--------QSLQKELARNQHLAERLLET 300 V L+L++ V + L A +RLRE Q+ A ++ Sbjct: 191 GTPWVLLVLAMTVCAGLVLTPYAVGRRLRESALIDSQQRIVKAQRYRAILAEREQQARVA 250 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLA-ADNASVKQSGQLIEQLSLGVYDAVR 359 EE R ++ARELHD + +++ + QA + LA + + I + +R Sbjct: 251 EERTRNEIARELHDIVAHSLSVMIVQAEGGKALATKKPEKAPEVLETIAETGREALLEMR 310 Query: 360 RLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQ 419 R++G LR + + ++ + ++ G+ L+ +E +S+ + ++RV Q Sbjct: 311 RIVGVLRQDTDAEFSPSPSLAEIPDLVDK--SGVKVELKVTGEEPVVSQALGLVVYRVVQ 368 Query: 420 EGLNNIVKHADAS-AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALG 478 E L N++KHA S T+ + + I D+G G +G GL GMRERVT++G Sbjct: 369 EALTNVLKHAGPSAHATVTLAYSPTAIYVEILDEGYGAAVQGDGRGHGLQGMRERVTSMG 428 Query: 479 GTLHISCL--HGTRVSVSLPQRY 499 G L G RV LP + Sbjct: 429 GQLSAEPRKEGGFRVMAKLPVQA 451 >UniRef50_A2SDA5 Signal transduction histidine kinase-like protein n=2 Tax=Burkholderiales Genera incertae sedis RepID=A2SDA5_METPP Length = 394 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 13/288 (4%) Query: 215 LALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQ 274 L LP I ++ G Q A+ A L A + + + L+ L+ ++ G ++ Sbjct: 91 LLLPFILVSGEIGEQVAVQAMLTGANDYLLKEN-----LARLVPALLHAIEGT---EALR 142 Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 +E + +L + R + LA+ L E+ R +ARE+HDD+G ++TA++ ++R A Sbjct: 143 AKQEADLALGQSEQRLRELAQHLQANIEAERTAIAREIHDDVGGSLTALKFDLAWIERHA 202 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 D A V Q Q + ++ +R++ LRP L+ L A++ + + E + Sbjct: 203 RDPA-VAQRAQGALETVTLAIESSQRIMHNLRPAILEQ-GLIAALQWMTQRFEKRNGVVT 260 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 R + L + +R QE L NI KHA A+ V + L L + D+G Sbjct: 261 VFRTSRDELPPLPAGVPLAAYRTAQEALTNISKHAYATRVEVDLTVAGRVLSLEVSDNGR 320 Query: 455 GLPPG--SGQQGFGLTGMRERVTALGGTLHISCLH-GTRVSVSLPQRY 499 GL + + FG+ G+RER +GG + +S GT + +S+P Sbjct: 321 GLIQEDLAKARSFGIRGLRERAAQVGGWVDLSSGPGGTTIILSVPLEA 368 >UniRef50_Q7WNB8 Two-component system sensor kinase n=2 Tax=Bordetella RepID=Q7WNB8_BORBR Length = 365 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 16/255 (6%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHD 314 L+ ++ G+ + A ++ R+ + LQ+ A L + E+ R+ +A ELHD Sbjct: 110 LIDFRGQPAVIGVGIDATLRLRRQ--EELQQSRAALSELVSHIESVREAERQRIAMELHD 167 Query: 315 DIGQTITAIRTQAGIVQR----------LAADNASVKQSGQLIEQLSLGVYDAVRRLLGR 364 +G ++A++ + R A ++ L VR++ Sbjct: 168 AVGGMLSALKFDMSRLARHIDRTLGGPGQDERRAQLEGVVGECLGLVQDTIATVRQISED 227 Query: 365 LRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNN 424 L P L L L AI + +R+ E GI E L L+R+ QE + N Sbjct: 228 LHPSALPHLGLAAAIANHLRQFEAR-YGIACRYAGETGELGLDMEAMGHLYRIFQESMTN 286 Query: 425 IVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHI 483 + KHA AS V ++ + L+L + D+G GL + G +GL GMRER LGGTL + Sbjct: 287 VAKHAQASEVQVRLGRDAATLVLSVRDNGVGLSGDDRRPGAYGLLGMRERARRLGGTLSV 346 Query: 484 SCLH--GTRVSVSLP 496 GT ++V +P Sbjct: 347 GAAPEGGTVLTVEIP 361 >UniRef50_A1VQL5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQL5_POLNA Length = 468 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 100/427 (23%), Positives = 163/427 (38%), Gaps = 16/427 (3%) Query: 85 LLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLT 144 L + L ++ + R G A P L + Sbjct: 29 TLFAFVIGLLAAALVLHQAREHIRVHIGRTGGTVARLIAGEAVQPRGTFRHGLEGLALAS 88 Query: 145 LTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQP--INWRGRHLVWYLLLFVISLWLQLG 202 L G L IC+ S P + W HL+ + + ++ G Sbjct: 89 LEGIGPLLGICVTVEDIYKRPIVQRCFGEASSPPAVVRWTLGHLIGPEIHYRGAIGQYPG 148 Query: 203 LPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQ 262 TP + + G + L+ + + P + +L++L + Sbjct: 149 FKVGEFVVTPNLDSEALAVWQQIRTVLGMTVGILVLNLLIYLPVRRALQPTEQILAVLAR 208 Query: 263 SLTGLLLGAGIQ----RLRELNQ-------SLQKELARNQHLAERLLETEESVRRDVARE 311 G L + LR + LQK +A +HLA+RLL E RR +ARE Sbjct: 209 MEAGDLFARMPRPSLIELRRIAAGFDHLTGRLQKTMAEQRHLAQRLLAVREEERRCLARE 268 Query: 312 LHDDIGQTITAIRTQAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQL 370 LHD+ GQ +T+I +A + R + + Q I ++ + ++++ +L +LRP L Sbjct: 269 LHDEFGQCLTSIGAEAAFITARARERQPELLPATQSIASVTAHMMESLQGILCQLRPVGL 328 Query: 371 DDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHAD 430 D L + L+ + G L + L + V+L+R+ QE L N ++HA Sbjct: 329 DAFGLRAGLEQLLGGWQRRLTGCSFELFIEGEIDDLPGDLTVSLYRIVQESLTNALRHAA 388 Query: 431 ASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHIS--CLHG 488 VT++ ++ R +L +EDDG P + G G+ GM ERV ALGG I G Sbjct: 389 PRKVTVRLRREAARCLLSVEDDGEKREPSTAGSGLGVLGMNERVAALGGRFAIEALSPQG 448 Query: 489 TRVSVSL 495 RV Sbjct: 449 MRVHAEF 455 >UniRef50_Q01NL1 Histidine kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NL1_SOLUE Length = 452 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 128/263 (48%), Gaps = 9/263 (3%) Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 A + V LLLS LV L+ + ++++ A Q L+ RLLE EE Sbjct: 182 AAGRLMLMLGVGLLLSFLVARLSLRHAENLEREADRHFAAVEQTRAELQQLSARLLEIEE 241 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRL 361 RR ++RELHD+IGQT+ ++ + Q A A++++ +L+ VR + Sbjct: 242 EGRRKLSRELHDEIGQTLALLQIEISRAQVARAGTPAALREHLDRARELAERTVQTVRNI 301 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 G LRP LDDL L A++ + + L GIV + L + + ++RV QE Sbjct: 302 SGLLRPALLDDLGLVPALQFQLEDF-LRRSGIVCEFVEQGVADHLPDPVKTCVYRVVQEA 360 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ-----GFGLTGMRERVTA 476 L+N KH+ A V + Q E L+ IEDDG G G + G GL GMRER Sbjct: 361 LHNCEKHSGARKVRVSVRQFPEALVAEIEDDGVGFQMGGRRASERNMGLGLLGMRERAGN 420 Query: 477 LGGTLHISCLH--GTRVSVSLPQ 497 +GG+L I GTRV++ +P Sbjct: 421 VGGSLVIDSAPRHGTRVALRIPL 443 >UniRef50_C6WWI1 Histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWI1_METML Length = 456 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 29/305 (9%) Query: 221 ALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAG-------- 272 ++ L ++ + + P+ +L + + G L Sbjct: 146 WAGFNQLMWVGLAFFIILNTLVYLLLSHSLKPIGRILGAINRIEQGDLTTRLPTFPLPEF 205 Query: 273 ---IQRLRELNQSL--QKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQA 327 L + +SL ++ L N+ L + + E RR +ARELHD++GQ +TAI+T A Sbjct: 206 DTIGHSLNRMAESLTAERLLEENRQLTHLIQKHIEDERRSLARELHDELGQYVTAIKTFA 265 Query: 328 GIVQRLAADNA------SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRS 381 + A N+ + S Q+I + +YD + ++ +LRP LD+L L + ++ Sbjct: 266 VSIANKAKANSSGAGMTEIASSAQVIVSAANQIYDGMHNIVRQLRPGALDNLGLAETLKD 325 Query: 382 LMREMELEGRGIVSHLEW-----RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTL 436 L+ +++ + L + +L E + L+R+ QE LNN +K+A+A+ + + Sbjct: 326 LVSSHQVQHPKLNIQLYLSENLQSGNLQSLGETISINLYRIVQESLNNALKYAEAATIEI 385 Query: 437 QGWQ-QDERLMLVIEDDGSGLPPGSGQQ--GFGLTGMRERVTALGGTLHISCLH--GTRV 491 + + D L L I+DDG G+ G+ Q FGL GMRERV AL GT I GT + Sbjct: 386 RLVKMSDGELQLSIKDDGVGMDIGAVDQSSHFGLLGMRERVQALHGTFAIESAPKQGTTI 445 Query: 492 SVSLP 496 ++ +P Sbjct: 446 TIRVP 450 >UniRef50_A1SCE2 Histidine kinase, dimerisation and phosphoacceptor region n=1 Tax=Nocardioides sp. JS614 RepID=A1SCE2_NOCSJ Length = 378 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 93/378 (24%), Positives = 146/378 (38%), Gaps = 13/378 (3%) Query: 128 LPWLWHGKESWNALLLTLTGGLTLAPICLVFWH--YLANNTWLPLGPS-LVSQPINWRGR 184 + ++ + L + GG L + YL+ W L S L++ P+ WR Sbjct: 1 MTVRRLPRDHPRVVDLVIAGGCLLILTVALLTDDGYLSGPRWAYLTTSCLMTTPLAWRRN 60 Query: 185 HLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIA 244 + L + + L +Q L D + L I A + + A L I+L A Sbjct: 61 APLTSLTIVMTGLAVQELLVDPAPTMDDALIPLLISAFSV-AAYGTRTTAGLGLGISLGA 119 Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQK-ELARNQHLAERLLETEES 303 W +D + +V L G + L++ + + A + A Sbjct: 120 GAIWVG--IDDIFFPVVAFSGAWLAGRLVHHLQQQSLMARNYAEALERERAATTRAALAE 177 Query: 304 VRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 R +ARELHD + T+ + QAG + AA + + IE+ + +RRLL Sbjct: 178 ERTRIARELHDVVSHTLGVMVVQAGGERLHAAPGSGAHTALASIEESGRLAMEQMRRLLS 237 Query: 364 RLRPRQLDDLTLEQ--AIRSLMREMEL-EGRGIVSHLEWRIDESALSENQRVTLFRVCQE 420 LR D +L + L E G+ L D + + V+ FR+ QE Sbjct: 238 MLREEA-DTRSLVPQPGLTQLDELTESVRATGLDVSLLVTGDPHPIGPDLDVSAFRIVQE 296 Query: 421 GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 L N V+H+ A+ + L + + D+G G P +G GL GMRERV GG Sbjct: 297 ALTNTVRHSGATRAEIHLDWASNSLRIEVSDNGRGPSPTPTPEGHGLLGMRERVNLFGGV 356 Query: 481 LHISCL--HGTRVSVSLP 496 L G R+ LP Sbjct: 357 LSTGRSNLGGYRLMAQLP 374 >UniRef50_D2ARZ7 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2ARZ7_STRRD Length = 397 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 84/381 (22%), Positives = 133/381 (34%), Gaps = 20/381 (5%) Query: 129 PWLWHGKESWNALLLTLTGGLTL------APICLVFWHYLANNTWLPLGPSLVSQPINWR 182 P +WH W LL T P+ LP+ I Sbjct: 16 PHVWHSLRGWEVLLAVATLVPVAFIVPGDLPVTEKILFAGLMAAILPVYFLFGRSAILTE 75 Query: 183 GRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIAL 242 R L ++ L+ + + F F L P + + ++ L + Sbjct: 76 DRRRGAVYLAVLVVLFTPAAFIEPSAAFALFGLC-PQCFMVFPAKPAVGVVIVLNAGPVV 134 Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE 302 + + L + + G ++R+ ++ +A + + Sbjct: 135 RFLVENQGDTFNFLSVSTIVIFFSAVFGIWMERIMRQSEERAALIAELEAQRAEVSRLSA 194 Query: 303 S-----VRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDA 357 R +A E+HD + Q T+I + + + L Q + Sbjct: 195 ERGALAERERLAGEIHDTLAQGFTSIIMLIQAAEAQSDP----ARHLSLAVQTARENLAE 250 Query: 358 VRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRV 417 R L+ L P LD TL++A+ L + E GI + R + L V L R Sbjct: 251 ARALIAALSPAPLDGSTLDEALVRLAGRLREE-TGIATAFSLRGESRPLPPPTEVVLLRA 309 Query: 418 CQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTAL 477 QE L N+ KHA A V + E + L I DDG G P +G+GL GMR RV + Sbjct: 310 AQEALANVRKHAAAGRVEVSASYGPETVALEIRDDGRGFDPAVA-EGYGLRGMRARVEQV 368 Query: 478 GGTLHISCLH--GTRVSVSLP 496 GGTL ++ GT + LP Sbjct: 369 GGTLTLTSSPAGGTTLEAVLP 389 >UniRef50_D2B7Q9 Histidine kinase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B7Q9_STRRD Length = 412 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 83/399 (20%), Positives = 148/399 (37%), Gaps = 29/399 (7%) Query: 123 ALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWR 182 L+ +P+ +++ G +L + LG + R Sbjct: 12 LLVNVVPYALLALLVVILMIVEDWAGGSLLIDLGLC----GLAAAWMLGMFTLRPGWWDR 67 Query: 183 GRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIAL 242 R + ++ ++ + + FTP L W + G A ++ A Sbjct: 68 PRIMGMFVAGLLVITAVLVARHPAFGLFTPAAYVYSFTVLRWPWRLLGVAAAAVLAGTAQ 127 Query: 243 IASQTWRDHPVDLLLSLLVQSLTGLLLG----------------AGIQRLRELNQSLQKE 286 + D ++ ++V ++ G ++ L N+ L+ Sbjct: 128 ASGIPKTDAIGLMMYGIIVAFNIAMMCGCAWVLRLAEQEEERREQALEELSRTNRLLEAS 187 Query: 287 LARNQHLAERLL-ETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 LA N L +LL + E R+ +ARE+HD + Q +T I Q +++ A + Sbjct: 188 LAENAGLHAQLLAQAREAGVLDERQRMAREIHDTLAQGLTGIIAQLQAAEQMHEVPAPWR 247 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 + ++ L+ RR + LRP L L A+ + + G+ + Sbjct: 248 RPFGAVKNLARESLAEARRSVDALRPEPLQTARLSDALAGVADRWS-KLHGLPVQVTTTG 306 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG 461 ++ L R QE L N+ KHA AS V + ++ + L + DDG G S Sbjct: 307 TARPMTPEAEFALLRTAQEALANVAKHAGASRVGVTLSYLEQEVALDVRDDGKGFDLASL 366 Query: 462 Q-QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + GFGLT MR+RV L G+L + G +S +P Sbjct: 367 EAGGFGLTIMRQRVEGLSGSLRVESEPGAGAGISACVPC 405 >UniRef50_Q1NT92 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerisation and phosphoacceptor region n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NT92_9DELT Length = 488 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 24/294 (8%) Query: 226 YGWQGALIATLMNAIALIASQTWRDHPVDLLLS----------LLVQSLTGLLLGAGIQR 275 + W + + +++ + +LL + + + T +GA + Sbjct: 184 FIWNSLWVVLIGLLLSVYLTWLITRPIKNLLTATRSVNKGDYTITLAETTSDEVGALTRS 243 Query: 276 LRELNQSLQKELARNQH-------LAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 ++ + L + + ++++ +E R+ +ARELHD GQT+ +I + Sbjct: 244 FNDMVKQLARAEESRREKDRLRRDFLQKVIAGQEGERKRIARELHDQTGQTLASIMVELK 303 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 +++ A D +++ ++Q A+ L LRP LDD+ L A+ + ++ Sbjct: 304 MLENSARDQE-IRRRIASLKQSITTEISALHDLAVTLRPSVLDDMGLGPALEMFVNDLRR 362 Query: 389 EGRGIVSHLEWRI-DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + L + ++R+ QE + N V+HA + + Q R+ Sbjct: 363 RHQ-LPVRLTMVGFGQQRPDSATETCVYRIIQEAVLNAVRHARPREIRILLEWQRTRIRG 421 Query: 448 VIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 V+EDDG G P + GL GM ER L GTL I GT V ++P Sbjct: 422 VVEDDGQGFDPEILASTDHLGLYGMVERAQLLNGTLSIDSEPGQGTMVVFAVPL 475 >UniRef50_C5AKB3 Sensory box histidine kinase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKB3_BURGB Length = 687 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 96/475 (20%), Positives = 154/475 (32%), Gaps = 39/475 (8%) Query: 61 PVLLGAEWLLIYWLTQAVGLTHFPLLMI-GSLLTLLPVALISRYRHQRDWRTLLLQGAAL 119 PV + A+ P + + S PV R R A++ Sbjct: 204 PVAGFLSVAIDLSRFMAMANGDLPAVALRVSAGPAAPVRAAGRPGGGDFPRLRRTLSASV 263 Query: 120 TAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPI 179 AL L L L P + +P+ Sbjct: 264 AGTALTLDFSAEGRRGARRADAFAALVLLAGSGCTALAGVLLLRLPNHGPAPGPRLPEPL 323 Query: 180 NWRGRHLVWYLLLFVISLW--------------------LQLGLPDELSRFTPFCLALPI 219 + I + L+RF P Sbjct: 324 GETRLMGIIRASSEAIITIDESQTVLIFNPAAERIFGVPAADAIGGPLARFLPERCRAAH 383 Query: 220 IALAWHYGWQGAL-IATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGL--LLGAGIQRL 276 +G A + P++ +S L + ++ + Sbjct: 384 ERHIARFGLAAASPRQMGRQQRLYGLRANGEEFPLEASISQLGDGAGRICTIVLRDVTER 443 Query: 277 RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL--- 333 + +L+ + + L + E + +ARELHDD+GQ + + +A + Sbjct: 444 VRSDNALEHARDELRAWSAHLQQAGEEEKTRLARELHDDLGQQLAVLEMEASAAAQALDR 503 Query: 334 ----AADN---ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A D + + +L+ +VRR+ LRP LDDL + AI L + Sbjct: 504 VLDGARDPGLIETAVNKLHGMRRLTDSAVASVRRVAANLRPLMLDDLGVVPAIEWLASDF 563 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 GI + E L+ LFR+ QE L N+ KHA AS V + + + Sbjct: 564 AKRH-GIEVVRHVALGERTLTGAGATALFRIVQEALVNVAKHAQASRVDICLKAVGDACV 622 Query: 447 LVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQ 497 L + D+G G+P + G FGL G+RER ALGG L I+ G ++V+LP Sbjct: 623 LRVADNGRGVPHERPRAGKAFGLIGVRERAHALGGRLTIAGPPGQGFSITVTLPL 677 >UniRef50_UPI0001B5513A putative two-component system sensor kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5513A Length = 389 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 91/398 (22%), Positives = 152/398 (38%), Gaps = 19/398 (4%) Query: 103 YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYL 162 + W +L A A ALL L +S L LA V Sbjct: 6 AWERSYWSWEVLFAVAYAATALLVLLNDGSAAAKSTAEAALGAIAVGYLAVGRRVVHGED 65 Query: 163 ANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGL-PDELSRFTPFCLALPIIA 221 + +L++ +LF+ + + L T + L ++ Sbjct: 66 NGTARVVAAVALIALSATAILATTTASFVLFLACPLVFMLLELRPGIVATTLLILLEPVS 125 Query: 222 LAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQ 281 + GW L++ L+ A++ ++ S+L T +L + EL + Sbjct: 126 AVLNGGWDNQLLSVLLPMTAIL-----------IVFSVLAGKFTSDVLRQS-RARAELIR 173 Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASV 340 L+ A L+ + R +ARE+HD + Q T+I T ++ L D ++V Sbjct: 174 ELESSQAEVARLSREAGTA--AERERLAREIHDTLAQGFTSIITLTQAIESELDTDLSAV 231 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 ++ L + + R ++ L P L +L +A++ + E GI E Sbjct: 232 RKHLALAGRTARENLAEARAMVAALAPSDLAAGSLPEAVQRQADRL-AEESGIPVECEVD 290 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 LS V L R QE L+N+ KH+ AS V ++ D + L + D+G G P Sbjct: 291 DALPPLSTAVEVVLLRAVQEALSNVRKHSGASLVRVRLSAVDGAIRLRVADNGCGFAPDV 350 Query: 461 GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496 GFGL GMR R +GG L + GT + + +P Sbjct: 351 DGAGFGLRGMRSRAEQVGGALEVRTGANGGTELELEVP 388 >UniRef50_C0VWJ7 Two-component sensory kinase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWJ7_9CORY Length = 402 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 74/387 (19%), Positives = 148/387 (38%), Gaps = 23/387 (5%) Query: 127 SLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHL 186 ++ G + ALLL +T +L+ L F + G + + + Sbjct: 9 GFSYITVGIHTITALLLAVTVATSLSVGLLEFMQVSFLA--VTFGAIYYAGNHFFEQLNS 66 Query: 187 VWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQ 246 + L L + L AL + L + + + A L +I + Sbjct: 67 TQHGLWAFGLTALWILLLPHHLSAVYLVAALYFVYL-RSFDERISTAAILGATGVVIVAN 125 Query: 247 TWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEES--- 303 V ++ L+ + + +R+ ++ ++ + + +L +TE Sbjct: 126 VPTGITVGSVVGPLLGGCVTIGIAFVFRRMWRMSAEKEQLIDQLMKTRSQLAQTEHEAGM 185 Query: 304 --VRRDVARELHDDIGQTITAIRTQAGIVQ---RLAADNASVKQSGQLIEQLSLGVYDAV 358 R+ +A E+HD + Q +++I+ + + + + ++ + Sbjct: 186 AAERQRIAHEIHDTVAQGLSSIQMLLSVAEADINAGKPKEEPLKKIAIAKKSAADNLAEA 245 Query: 359 RRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVC 418 R ++ L+P L LE A+ + +E + ++ ++ L TL R+ Sbjct: 246 RAMIAALQPAALAKTNLEGALERIAENIES----VDVNISVEGEDRQLPMRTETTLLRIA 301 Query: 419 QEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP---GSGQQGFGLTG---MRE 472 Q L N+VKH+ A+A + + + L + D+G G P + +G G G MRE Sbjct: 302 QGALGNVVKHSQATAALVTLTYDPDEVRLDVVDNGVGFDPAQVAARPRGLGHIGVDAMRE 361 Query: 473 RVTALGGTLHISCLH--GTRVSVSLPQ 497 R +GGTL I GT +SV++P Sbjct: 362 RAREVGGTLAIESTPGQGTAISVAVPI 388 >UniRef50_B5VVU4 Integral membrane sensor signal transduction histidine kinase n=3 Tax=Oscillatoriales RepID=B5VVU4_SPIMA Length = 452 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 123/345 (35%), Gaps = 25/345 (7%) Query: 173 SLVSQPINWRGRHLVWYLLLFVISL---WLQLGLPDELSRFTPFCLALPIIALAWHYGWQ 229 L+ + R R + WL + F L + +I + W+ Sbjct: 97 GLMGLRLPERSRTPAIRWVYIACGFTFSWLAVVFGGRGVSFLSALLLVVVIRACLLFSWR 156 Query: 230 GALIATLMNAIALIA---------SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL---- 276 + + + + W D L+L+L S L L Sbjct: 157 DRIAVAIFAYGLFLLWVFLRLRPLAGNWADPIQGLVLTLTFNSSVLFGLVLLFVLLLVGA 216 Query: 277 ----RELNQSLQKELARNQHLAERLL-ETEESVRRDVARELHDDIGQTITAIRTQAG-IV 330 +E Q L + + + A + R +ARE+HD +G +TA Q Sbjct: 217 LLSEQESRQKLAEANQQLREYAMLIEDRAISQERNRIAREIHDSVGHHLTAQSIQLENAA 276 Query: 331 QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEG 390 +A D + Q +L VR + R L + QA+ L+ E E Sbjct: 277 LFIAEDKQRAARHLQQARELGKEALKEVRASVKSWRSHPLKQ-SFLQALSQLISEFEA-T 334 Query: 391 RGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE 450 + +I L + + L+RV QE L NI KHA A+ V L + L IE Sbjct: 335 TSVPVASNLQI-PDTLPLDISIVLYRVIQEALTNISKHAQATKVDLFLLENSREFALKIE 393 Query: 451 DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 D+G G P GFGL GM ERV A+GG ++ G + + Sbjct: 394 DNGCGFNPAQNTTGFGLQGMGERVMAVGGHFDLNSSPGEGCKIEV 438 >UniRef50_Q01SI4 Sensor protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SI4_SOLUE Length = 449 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 10/305 (3%) Query: 198 WLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLL 257 L P+ S F ++ ++ A I +T + L+ Sbjct: 144 ILAAEAPETFSSIDLFRFHGAFASVVARLLEAEYRKLSVAQAQ--IEHRTSHLSEISLVF 201 Query: 258 SLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIG 317 + L + ++ + +L + ++ + A ++ +LE +E+ R + ELHD++G Sbjct: 202 AAASVVLALIFAVFTVRLVSQLIRQMESQTAELGRVSWHMLEDQEATARRFSHELHDELG 261 Query: 318 QTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQ 377 Q++TA++T + A L VR++ LRP LDD LE Sbjct: 262 QSLTAVKTNLTAL---AGTTEPQAPRLADCVHLVDEAIGNVRQMSQLLRPTILDDFGLEA 318 Query: 378 AIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQ 437 +R L GI H+E L ++ LFR+ QE L NI +HA A VT++ Sbjct: 319 GLRWLADGFSAR-TGIEVHVESTYS-GRLPDDTETHLFRISQEALTNIARHAAARHVTVK 376 Query: 438 GWQQDERLMLVIEDDGSGLPPGSG-QQGFGLTGMRERVTALGGTLHISCLH--GTRVSVS 494 ++ + L I DDG G+ +G G+ GMR R + GG +++ G + V Sbjct: 377 LDRKPAEICLSISDDGRGIAAAPQNGRGLGMIGMRARARSAGGDVNVRSRPGEGVLIEVR 436 Query: 495 LPQRY 499 +P ++ Sbjct: 437 VPLKH 441 >UniRef50_D0LYS5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS5_HALO1 Length = 509 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 6/235 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 L L + ++ + ++ + Q A R+L +E+ R+ ++RELHD IGQ + R + Sbjct: 258 LALIRDVTERKQADDKIRAAVLAKQAFASRILGAQEAERQHLSRELHDSIGQLLLVHRLE 317 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A + + + + + VR L LRP +DDL +E A+ +L ++ Sbjct: 318 AEWLANQLEPGPE-RDATEHLCTGLDETLHLVRTLAMDLRPPAIDDLGIESALETLCVDL 376 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446 G+ E + L VTL+R+ QE L N +H+ + + Q D L Sbjct: 377 G-RRAGVRCEFENSVALPGLRTEIGVTLYRIAQEALANAARHSGCRTIRVVLAQHDSTLE 435 Query: 447 LVIEDDGSGLPPG--SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 L + DDG G+ P + FGL MRER +GG + I GT + V++P Sbjct: 436 LSVSDDGVGIAPERLADDASFGLISMRERAELIGGHVSIRSSPKHGTHIRVAIPH 490 >UniRef50_B5I6F0 Two component system sensor kinase n=9 Tax=Streptomyces RepID=B5I6F0_9ACTO Length = 495 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 78/385 (20%), Positives = 125/385 (32%), Gaps = 16/385 (4%) Query: 129 PWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNT---------WLPLGPSLVSQPI 179 PW L L L +Y A+ + + S + Sbjct: 104 PWWRDAGGDGRGARWPWPSTLVLTFFVLGGSNYAAHQQVGERAALDPFARALLVIGSGLL 163 Query: 180 NWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLAL---PIIALAWHYGWQGALIATL 236 WR R V + + L LG ++A W + Sbjct: 164 LWRHRRPVLVVFGTAAAAMLYLGAGYPYGPVFLTVALACFSAVVAGHRKAAWTALGMLWA 223 Query: 237 MNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAER 296 + + W D + + + A + ++ Sbjct: 224 GHVLVAHWLYQWLPPSKDSAAPWGQEGVIAAWVVAIVAVSELARTRREQWARERAERTRA 283 Query: 297 LLETEESVRRDVARELHDDIGQTITAIRTQAGI-VQRLAADNASVKQSGQLIEQLSLGVY 355 + R +ARELHD + +I+ I QAG+ + L D + + I+ S Sbjct: 284 AQRRADEERLRIARELHDVLAHSISVINVQAGVGLALLDTDPEQARTALSTIKAASKEAL 343 Query: 356 DAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLF 415 VR++L LR + L + + G +E L + F Sbjct: 344 GEVRQVLDTLRTPGDAPRAPAPGLDRLPELVS-QAAGAGLTVEVEGTAPGLPPGADLAAF 402 Query: 416 RVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVT 475 R+ QE L N+V+H+ + ++ + L L I+DDG +G G GL GMRER Sbjct: 403 RIVQEALTNVVRHSGSRHARVRLDHDTDALRLRIDDDGPATGADAGGSGNGLAGMRERAA 462 Query: 476 ALGGTLHISCLH--GTRVSVSLPQR 498 ALGGT+ G RV LP + Sbjct: 463 ALGGTIEAGPRPEGGFRVLAVLPLK 487 >UniRef50_Q3BTZ2 Sensor protein n=13 Tax=Xanthomonadaceae RepID=Q3BTZ2_XANC5 Length = 710 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 110/233 (47%), Gaps = 6/233 (2%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ 326 LL+ + + +L + A Q +A+RL +E RR ++R+LHDDIGQ ITA++ Sbjct: 467 LLVVRDLSEPERMRDALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLS 526 Query: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM 386 A D + ++ + L+ +R L LRP QLD L LE A+R M Sbjct: 527 AHAALD-EPDADARREDLLEVVSLADTTVTKLRNLSMLLRPPQLDALGLEAALRWQAS-M 584 Query: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW-QQDERL 445 + L+ + E FR+ QE L N ++HA A V L+ + Sbjct: 585 LFRASQVRLELDIQALEERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDGDSF 644 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 L + DDG G P G +G GL MRER +GGTL I GTRV++ LP Sbjct: 645 RLEVSDDGDGFEPE-GPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLP 696 >UniRef50_C4DEB2 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DEB2_9ACTO Length = 409 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 97/391 (24%), Positives = 155/391 (39%), Gaps = 25/391 (6%) Query: 130 WLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWY 189 W + ++LL + GL+ WL L L S P+ R L W Sbjct: 18 WFQARPLAGDSLLALIVFGLSGLAFLAPEIKPTDPLIWLWLF--LGSLPVAIRRVWLWWS 75 Query: 190 LLLFVISLWLQLGLP-DELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIAS--- 245 L L + L+ + P LS + IA A + A A L L Sbjct: 76 LALTIALLFASMLDPLAWLSGTWAILVIAYTIAAALPFRNAIAATAALWGVATLTIVMAR 135 Query: 246 --QTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ-KELARNQHLAERLLETEE 302 Q + +L+ V ++T +G + R L+ + ++ +++E Sbjct: 136 PEQLAQSPAFVVLMFNYVLAVTCFGIGRVVHGKRVKVSELEDRARIAEENQVAKVVEAIN 195 Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQR-LAADNASVKQSGQLIEQLSLGVYDAVRRL 361 RR +ARELHD + ++ + A +R L +D ++ IE +RRL Sbjct: 196 DERRRIARELHDVVAHHLSVMNVMATGARRTLTSDPDRADEALATIESTGRTTLREMRRL 255 Query: 362 LGRLRP---RQLDDLTLEQ-----AIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 L LR +DD L AI +L+ ++ G+ L L + +T Sbjct: 256 LEVLRTDDEPAVDDRELTPQPGLDAIHTLVGQV--RSAGLPVKLVIDGTPFPLDQGIALT 313 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG---LPPGSGQQGFGLTGM 470 FR+ QEGL N +KH + ++ +++ L + + D+G+G L SG+ G GL GM Sbjct: 314 AFRIIQEGLTNTLKHGGPANSGVRISYREDELEIEVTDNGAGQKSLTTASGRVGHGLVGM 373 Query: 471 RERVTALGGTLHISCLH--GTRVSVSLPQRY 499 RERV GG+L G RV +P Sbjct: 374 RERVALYGGSLRTGPRPGGGFRVHALIPIEA 404 >UniRef50_Q0EZ32 HrpX related protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ32_9PROT Length = 668 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 12/241 (4%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + R ++ + L N+ L +L++ +E RR +AR+LHD++GQ +T I+T+ Sbjct: 424 VERDATRRKQAEADQARLLQENRALMRQLMQVQEDERRTLARDLHDELGQLLTGIQTRGE 483 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 + A D+ V+ G+ I + + ++A L RLRP LD L L A+ L E Sbjct: 484 YITMHAIDSE-VRIMGEEIVRSTSASFNASHASLLRLRPATLDTLGLTAALTELTGE-RQ 541 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQ------QD 442 + GIV L D AL + + + ++R+ QEGL N +H A V + +D Sbjct: 542 KQAGIVCSLRIDGDIDALDDMRAIAIYRLVQEGLTNAFRHGKADCVNVIIRALPAHAGRD 601 Query: 443 ERLMLVIEDDGSG--LPPGSGQQGFGLTGMRERVTALGGTLHIS--CLHGTRVSVSLPQR 498 +L + I D+G G G G+ GMRERV ALGGT ++ G R+ LP Sbjct: 602 GQLQVEISDNGKGVHAEADRTPTGMGVIGMRERVHALGGTFMLTHVPEDGVRIKAMLPLD 661 Query: 499 Y 499 + Sbjct: 662 H 662 >UniRef50_UPI0001B54039 histidine kinase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54039 Length = 443 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 88/355 (24%), Positives = 134/355 (37%), Gaps = 29/355 (8%) Query: 167 WLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLAL--------P 218 WL L ++S + H + + F + L L + F F + P Sbjct: 79 WLLLTTVVLSAKL---RDHPLTAAVAFAGVVTLGAILEARETYFVIFMVYAFFAAMRMKP 135 Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTG----LLLGAGIQ 274 ++ G LI T+ + A + L++ G +G Sbjct: 136 MVLAVLGIGITSLLINTMTLGGPIHALTVSPGVWISLVIVQTAAISGGGAVFAAVGRQNA 195 Query: 275 RLRELNQSLQKELARNQHLAERLL-ETEE----SVRRDVARELHDDIGQTITAIRTQAGI 329 + + L A N+ L +LL + E R+ +++E+HD + Q T I TQ Sbjct: 196 ERKRMLDQLAAAEAENRGLQRQLLAQAREAGVLDERQRLSQEIHDTLAQGFTGIITQLEA 255 Query: 330 VQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 + D A ++ QL+ A RR + LRP L+ TL +A+ + R Sbjct: 256 AAQARDDTAEWERHLAAATQLARENLTAARRSVAALRPEPLEAATLPEALAEVARLWSER 315 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI 449 G+ + L TL R+ QE L+N+ KHA AS + + + L Sbjct: 316 -TGVPAEFSTTGTAVPLHPELEATLLRITQEALSNVAKHARASRAGITLSYMGDEVTLDA 374 Query: 450 EDDGSGLP------PGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 DDG G P S + G GL GMR R L G LH+ GT VS LP Sbjct: 375 RDDGVGFDPAHPPAPPSAEGGHGLPGMRRRAERLAGALHVESEPGGGTAVSARLP 429 >UniRef50_C8XB57 Histidine kinase n=2 Tax=Actinomycetales RepID=C8XB57_NAKMY Length = 368 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 9/334 (2%) Query: 162 LANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIA 221 + P+ P+ P + R L + + + + + P +S ++ Sbjct: 3 VTIGRRAPVRPAARRPPTSLYRRLLAFNAAVVLAGALVLIVTPVTVSNPVRLTEVTVLVI 62 Query: 222 LAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQ 281 A++ S + L + I R E+ Sbjct: 63 GGALMVAMNAILVRATLRPLDQLSALMERVDLLRPGDRLAVPADRD-MARVIGRFNEMLD 121 Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVK 341 L+ E + + L +E R+ +ARELHD+IGQ++TA+ + A ++ Sbjct: 122 RLEHERGVS---SAHALAAQEGERQRIARELHDEIGQSLTAVLLGLK--RTADQAPAPLR 176 Query: 342 QSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI 401 + +++ D VR + RLRP L+DL L A+ +L + R + + Sbjct: 177 EELHDVQETIRACLDEVRTVARRLRPGVLEDLGLRSAMAALASDFTAASR-VPVDMAVDP 235 Query: 402 DESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG 461 AL + + ++R+ QE L N+ +HADA V L + + L I DDG G P + Sbjct: 236 RLPALGADAELVIYRIAQEALTNVARHADADRVDLTLIAHPDGVELTIIDDGRGFDPAT- 294 Query: 462 QQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 +G G+ GMRER + TL I G + L Sbjct: 295 -EGAGIRGMRERAILVAATLTIGPDPGGGSRLRL 327 >UniRef50_C7ME45 Signal transduction histidine kinase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7ME45_BRAFD Length = 441 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 91/389 (23%), Positives = 154/389 (39%), Gaps = 22/389 (5%) Query: 129 PWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVW 188 P+ W + L+ G L L + + W +++ R R L Sbjct: 21 PFRWIIENPGTTDLIGFGSGAFLV--LLFSFGTGSYGWWTLFSVPMIAAGALCRVRPLPG 78 Query: 189 YLLLFVISLW-LQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIA------ 241 L + +++ + + +P L F IA ++ A L+ Sbjct: 79 VLAIGALAVLHVLVNIPVVLGDVMTFYAMFCAIAYGGRLVHGLSVAAGLLGVFVQASFWS 138 Query: 242 LIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETE 301 L A ++ P++ L+S L L G + + L L ++ ++ A + AE+ + Sbjct: 139 LDALRSEYGGPIEALVSFLGLMLIGTITIVAVWALANLQRARVRQYALTRDRAEQAVRER 198 Query: 302 E--------SVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASVKQSGQLIEQLSL 352 E R +ARE+HD + +++ I QA + +AA + I + Sbjct: 199 EQRTALAVADERARIAREMHDVVAHSLSVIIAQADGGRFVAAQKPEKAAEVLTTIGETGR 258 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREM-ELEGRGIVSHLEWRIDESALSENQR 411 +R LLG LR + L + G+ LE L + Sbjct: 259 AALADMRSLLGVLRQEDETSFGPQPGPEMLPELADRVRTAGLSVELEIDGALEDLPQPLG 318 Query: 412 VTLFRVCQEGLNNIVKHADA-SAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGM 470 V+LFR+ QE L N++KHA +A ++ + +L + + DDG G P S QG GLTGM Sbjct: 319 VSLFRLVQESLTNVLKHAGPGAAAEVRILRDAHQLTVEVIDDGQGTDPASDGQGHGLTGM 378 Query: 471 RERVTALGGTLHISCLH--GTRVSVSLPQ 497 +ER++ GG L L G RV ++P Sbjct: 379 QERMSLFGGRLQAGPLPSRGYRVRATVPL 407 >UniRef50_A4JE38 PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Burkholderiaceae RepID=A4JE38_BURVG Length = 479 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 10/260 (3%) Query: 250 DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVA 309 ++ V G LLG ++ K+L LA R+ E ++ ++ Sbjct: 218 SRFWANVVITAVYGPAGKLLGFAKVTRDMTERNRLKQLEYASELAARIETAREEEKKRIS 277 Query: 310 RELHDDIGQTITAIRTQAGIV--QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRP 367 RELHDD+GQ +TA++ + Q A +A Q + +VRRL LRP Sbjct: 278 RELHDDLGQQLTALKMGLNRLVTQDDATPSAQAAQLADSMRAALDRAILSVRRLSAGLRP 337 Query: 368 RQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVK 427 LDDL L A+ L+ + G+ + ++ LFR+ QE L NI + Sbjct: 338 AILDDLGLLPALEWLVDDFRQR-SGLRVLFHTERCDVRFTDAASTALFRIVQEALTNIAR 396 Query: 428 HA-DASAVTLQGWQQDERLMLVIEDDGSGLP----PGSGQQGFGLTGMRERVTALGGTLH 482 HA + + V + + + L IEDDG P P + GL G+R+RV LGGT Sbjct: 397 HAWNPTEVRIAFRCTESQCDLSIEDDGEPAPSTERPPAAVHSSGLAGIRDRVRRLGGTSV 456 Query: 483 ISCLH--GTRVSVSLPQRYV 500 L G +S+S+P+R V Sbjct: 457 AEPLPSRGFGISLSVPRRSV 476 >UniRef50_C6J152 Histidine kinase dimerization and phosphoacceptor region n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J152_9BACL Length = 360 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 148/345 (42%), Gaps = 31/345 (8%) Query: 177 QPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATL 236 +P N R + +LL VI++ + + F P P G + + Sbjct: 5 KPSNMVSRSMRGGILLSVITMAATIYVMYTYGYFQPQ----PSWRTVIQAGMTLLSLLLI 60 Query: 237 MNAIALIASQTWRDHPVDLLLSLLVQSLTG-----------LLLGAGIQRLRELNQSLQK 285 + A +D L L+Q G LG ++L + + ++ Sbjct: 61 IGAAFGFFLGYRPKRQIDGLREALLQWEKGNQTGSVPKLGEDELGRLAEQLERIGKRWEE 120 Query: 286 ELARNQHLAERLLETEE--------SVRRDVARELHDDIGQTITAIRTQAGIVQR-LAAD 336 +++ Q L+ + E R+ +ARELHD + Q + AI A V R L D Sbjct: 121 QVSSLQRLSTHNAQLAEQARVSAIVEERQRLARELHDAVSQQLFAISMTATAVGRTLEKD 180 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 ++ +LIE+++ +R LL LRP L+ L Q + L++E++ + Sbjct: 181 FDKAQRQVELIEEMASVAQSEMRALLLHLRPVYLEGKELSQGLSDLVKELK---TKVPMD 237 Query: 397 LEWRIDES-ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSG 455 L IDE L + LFR+ QE ++N ++HA A + ++ + E + + + D+G G Sbjct: 238 LTLEIDEDLNLGKGIENHLFRIIQEAMSNTLRHAKADKMEIRIHHRGEAVKVTLRDNGIG 297 Query: 456 LPPGS-GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 Q +GL+ M+ER+ +GG++ GTR+ +S+P Sbjct: 298 FELDDKKQASYGLSTMQERIHEIGGSIQFITAPGKGTRIEISVPL 342 >UniRef50_C4DQ88 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQ88_9ACTO Length = 381 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 77/374 (20%), Positives = 130/374 (34%), Gaps = 25/374 (6%) Query: 139 NALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINW---------RGRHLVWY 189 L + + +V +++ L P +S P+ R R Sbjct: 10 PRGKLADAAIVLVVTAIVVIMTLTSSDISDSLLPLWISWPVQLAACVALYWRRVRPQTVM 69 Query: 190 LLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWR 249 + V+ + F +AL +A + +M + Sbjct: 70 AVTLVLIAIYYPLTGEGSPVFVTIMIALYSVAASGQLRASMIWAGVVMAITIGGELASPV 129 Query: 250 DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVA 309 H ++ L++ + R +L E R + R +A Sbjct: 130 RHLDNIALAMFTGWCVATVAVGVTVHDRM---ALLAETKRRAAETALREAAQ--ERLRIA 184 Query: 310 RELHDDIGQTITAIRTQAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR-- 366 R++HD +G ++ I QA R+ D + + I+ S +R+ L LR Sbjct: 185 RDVHDVVGHHLSLINVQASAALHRIDKDPGQAETALATIKTTSSQTLGELRKTLDVLRQS 244 Query: 367 ---PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLN 423 P L I +L + G+ + L + +R+ QE L Sbjct: 245 DEEPPTTPTPGLAD-IEALFDGV--RSAGMTVDHHVDGEPRELPVEVDLACYRIVQEALT 301 Query: 424 NIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHI 483 N+VKHA+A+ VT++ +D+ + L I DDG P + G G+ GM ER ALGG L Sbjct: 302 NVVKHANATRVTIRLAYRDDTIDLAITDDGV-AEPPTTTSGHGIRGMTERAQALGGELSA 360 Query: 484 SCLH-GTRVSVSLP 496 G V +LP Sbjct: 361 EPTRTGFTVHATLP 374 >UniRef50_C5C2U0 Histidine kinase n=2 Tax=Actinomycetales RepID=C5C2U0_BEUC1 Length = 431 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 84/379 (22%), Positives = 137/379 (36%), Gaps = 29/379 (7%) Query: 144 TLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGL 203 LT + + + S P + + L+ + L Sbjct: 39 DLTVPVAPVLALTAATVAWVAGFQVRIRASGGGSPAPLA--AVYYAGLMIAAGGLVWLAP 96 Query: 204 PDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQS 263 + F + A + W + A + ++ D + + ++ Sbjct: 97 WYGIFAFVGYVHAYEHLVGGWRHVGAAVTSAIMAVVYLGGFAEIDGDWWLWGAIVVVSSV 156 Query: 264 LTGLLL-------------GAGIQRLRELNQSLQKELARNQHLAERLL-ETEE----SVR 305 L L + + E N L+ L N L +LL + E R Sbjct: 157 LASLCFEFLDVSDRHAAEQRQALAEVHEANARLEAALEENAGLHAQLLVQAREAGVLDER 216 Query: 306 RDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRL 365 + +ARE+HD + Q + I TQ ++ A + + + L+ RR + + Sbjct: 217 QRMAREIHDTLAQGLAGILTQLQAAEQAAHEPEAWGRHVTNATDLARESLAEARRTVHAV 276 Query: 366 RPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNI 425 P L D L +AI + R E + + L D + + VTL R QE L N+ Sbjct: 277 EPEALADARLPEAIGDVARRWS-EVNDVRADLTTTGDPRPMHVDVEVTLLRAAQEALANV 335 Query: 426 VKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ------QGFGLTGMRERVTALGG 479 KHA AS V L ++ + L + DDG G P + + GFGL GMR+RV L G Sbjct: 336 AKHARASRVGLTLSYMEDLVTLDVRDDGVGFEPDATRGQGHADGGFGLAGMRQRVQRLAG 395 Query: 480 TLHISCLH--GTRVSVSLP 496 L + GT +S S+P Sbjct: 396 RLDVESEPGGGTAISASVP 414 >UniRef50_Q3SII8 Possible Sensor with PAS/PAC domain n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII8_THIDA Length = 493 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 112/235 (47%), Gaps = 8/235 (3%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I R +E + AR + LA + +E R +ARE+HDD+G +T I+ Sbjct: 253 IMLNITRSKEAEAEIDHSRARLRALAAHVESAKEQERLYLAREVHDDLGGNLTTIKIGLS 312 Query: 329 -IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 + ++ +++ + + + ++ L ++A R+ LRP LD + AI S ++ Sbjct: 313 CLARQFPSESTPLTERVRYLDNLVDQTFEAAHRIASNLRPAALD-FGIVPAIDSQLQRFG 371 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 I DE L + +FR+ QEGL N+ KHA A+ V L+ + + L L Sbjct: 372 -RNTEIAYEFRAPTDEIPLDSAAAIAVFRIVQEGLTNVAKHARATRVRLELVRDRDTLHL 430 Query: 448 VIEDDGSGLPPGS---GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + D+G GLP + FG+ GM ER ALGG L + GT +S+ +P Sbjct: 431 TLTDNGRGLPAAPNGMARPVFGILGMSERAAALGGQLVVRPAPDQGTELSLRIPL 485 >UniRef50_Q8YV44 Two-component sensor histidine kinase n=3 Tax=Cyanobacteria RepID=Q8YV44_ANASP Length = 944 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 5/198 (2%) Query: 303 SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQ-SGQLIEQLSLGVYDAVRRL 361 R +ARE+HD + Q T I Q G +++ D+ + LI++L+ RR Sbjct: 744 EERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDLEATESHLDLIKELARTGLVEARRS 803 Query: 362 LGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 + LRP+ L++ +L+ A+ L+ ++ + E +L L R+ QE Sbjct: 804 VVALRPQLLEEGSLQSALHRLVAQLRTAAIDTTLYYEIEGAVYSLPTEIESNLLRMGQEA 863 Query: 422 LNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ--QGFGLTGMRERVTALGG 479 L N ++HA+A + ++ +R L + D+G G GS +GFGL GM ER +G Sbjct: 864 LTNAIRHANADEIRVELVYDRDRFCLRVRDNGQGFGVGSIPASEGFGLLGMSERAERIGA 923 Query: 480 TLHISCLH--GTRVSVSL 495 L I GT + V++ Sbjct: 924 QLTIRSQPGQGTEIVVTV 941 >UniRef50_Q220B2 Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B2_RHOFD Length = 359 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 12/288 (4%) Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRE 278 A A + ++ I ++ P +L + +L + + + Sbjct: 70 AAAQAIRTQFALPVVFLTAFDADQILARAKLTEPFGYILKPFSERELRNVLAMALYK-HQ 128 Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNA 338 L + Q L+ R+LE +E RR VA ELHD++GQ++TAI+ + +RL D + Sbjct: 129 AEAKLLTTTRQLQALSRRVLEAQEFERRRVAIELHDELGQSLTAIKINLQLSERLH-DGS 187 Query: 339 SVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLE 398 S + + + I + VRRL LRP LDDL L A++ + E+ H Sbjct: 188 SSELNAENIR-IVEDALQQVRRLATGLRPAMLDDLGLSPAVQW-IAEVIAARSNFTVHFC 245 Query: 399 WRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPP 458 L+ + FR+ QE L NI +HA A VT+ + L+L ++DDG+G Sbjct: 246 PEDMPQRLAPDIETACFRIVQEALTNISRHAQAKRVTITLRRMSNALLLCVQDDGNGFDL 305 Query: 459 GSGQ------QGFGLTGMRERVTALGGTLHISCLHGTR--VSVSLPQR 498 + + G+ GM+ER +GG L I G V +S P R Sbjct: 306 HAMRERAMLGGSIGVLGMQERAMLIGGQLDIESAPGLGSMVQLSCPWR 353 >UniRef50_Q0A524 Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A524_ALHEH Length = 486 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 120/283 (42%), Gaps = 8/283 (2%) Query: 218 PIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLR 277 +A W + I R L V + Sbjct: 163 FAVAANALMYWLLGRALRPLGHILKGLDALQRGRLESRLPRFRVHE-----FDRVSRHFN 217 Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 + SL R Q L RL + +E+ R +ARELHD++GQ + AIR A I+ Sbjct: 218 SMADSLATSHQRIQRLNRRLFDVQEAERHTLARELHDELGQCLVAIRADAMIIANAPDAP 277 Query: 338 AS-VKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 + V+ S I Q + VY RR++GRL P L+ L L A+R + + I Sbjct: 278 PANVRASADAIRQTAGHVYQLTRRIMGRLHPAALEQLGLGPALRQMAGDWARRHPDIAVA 337 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL 456 +E + L +Q + L+RV QEGL N+ KHA A V L+ + E L LVI DDG GL Sbjct: 338 MEIQDTPRGLPPSQAIHLYRVVQEGLTNVTKHAHARRVRLRLRDRGEHLWLVIGDDGHGL 397 Query: 457 PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 G GL GM ER+ LGG L GT + ++P Sbjct: 398 GTRRDGDGMGLMGMAERIQGLGGRLRCFSGPAGGTTLVAAVPL 440 >UniRef50_B9J9Z4 Two-component sensor histidine kinase protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9J9Z4_AGRRK Length = 414 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 13/266 (4%) Query: 234 ATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHL 293 A + +T+ + + ++LV T +LL +R+ + +R + L Sbjct: 145 AAANAGMRANIKRTFIVVILIAVPAVLVVFTTCMLLTFRERRMAD---------SRLKEL 195 Query: 294 AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN-ASVKQSGQLIEQLSL 352 +R+++T+E R +ARELHD + Q + +R + R + + + Sbjct: 196 TQRVIDTQEEERARLARELHDGVSQNLLGVRYVMDLASRKVRNQVDDAATTIEKGVDALN 255 Query: 353 GVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRV 412 +RRL LRPR LDDL L A+ +L E GI + +E S + Sbjct: 256 SAIKDIRRLSHDLRPRVLDDLGLTAALTALADNF-AERTGIATEIESVGFSSMVKPEAST 314 Query: 413 TLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGL-PPGSGQQGFGLTGMR 471 L+RV QE LNN+ +H+ A+ + ++ W + R L I D+G+G G G+ G GL M+ Sbjct: 315 ALYRVAQEALNNVERHSGATLLAIKLWSERGRARLRISDNGTGFEAAGEGKGGLGLRNMQ 374 Query: 472 ERVTALGGTLHISC-LHGTRVSVSLP 496 ER+ G L + GT ++ LP Sbjct: 375 ERMAHFHGLLLVQSTADGTTLTAMLP 400 >UniRef50_C0XNJ5 Two component system histidine kinase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XNJ5_9CORY Length = 412 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 137/356 (38%), Gaps = 26/356 (7%) Query: 161 YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPII 220 L + L LV P R W L+ + +W+ + L+ + L I Sbjct: 53 VLVSIFAFLLFYGLVEMPRWGRAGQAGW--LMALTGMWIADMMVTPLAVYW--VFILFFI 108 Query: 221 ALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELN 280 L W+G + L IA+ A Q ++ ++ +L + + ++ Sbjct: 109 YLRTFNDWRGVVWVALGLGIAVGA-QVPTGLTFGGVIGPVLSALVVIATNYAFTTIARVS 167 Query: 281 QSLQKELARNQHLAERLLETEES-----VRRDVARELHDDIGQTITAIRTQAGIVQRLAA 335 + + + ++L ETE R +A E+HD + Q +++I+ R Sbjct: 168 KERESLIDELLTTRQQLAETEREAGVSQERERLAHEIHDTVAQGLSSIQMLLHAADRDLD 227 Query: 336 DN-------ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 A K + + + R ++ L P L + +L QA+ + R+ Sbjct: 228 ATGLPPGELARAKSRIETARRAASSNLAETRAMIAALTPAPLTEASLRQALERIARDFS- 286 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLV 448 + GI +E + + L L R+ Q ++N V+H+ A+ + + + + L Sbjct: 287 QASGIGIEVESDGEHTPLPMRCEAGLLRIAQGAVSNAVQHSGATRIRVTLTYSPDEVRLD 346 Query: 449 IEDDGSGLPPGSGQ------QGFGLTGMRERVTALGGTLHISCLHG--TRVSVSLP 496 + D+G G P + + GL+ MR R LGG L + G T V+ ++P Sbjct: 347 VVDNGRGFDPLALESAPTGLGHLGLSAMRSRAEELGGELIVESAPGGPTAVTAAIP 402 >UniRef50_C0GIE2 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIE2_9FIRM Length = 380 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 79/353 (22%), Positives = 135/353 (38%), Gaps = 28/353 (7%) Query: 171 GPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAW-----H 225 LV+ + + ++ V + L LG+ L ++ Sbjct: 27 SFGLVAGAAISWLGTVDYPTMVLVPGMTLLLGIIAGTVGLVGAYLEQYLLVRGIKEDAHR 86 Query: 226 YGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLV--QSLTGLLLGAGIQRL------- 276 ++AT++ I+ +AS + + + L + G++ G + + Sbjct: 87 NVLTFVVVATMVTGISFVASIIIGEGHIVEEMRRLALPGLILGIIFGGTVSYVNYRFEKD 146 Query: 277 RELNQSLQKELARNQHLAERLLETEESVRR--------DVARELHDDIGQTITAIRTQAG 328 R+ Q+L+ E LAE+ EE+ R +ARELHD I Q I I Sbjct: 147 RQQVQTLEMENRYLAELAEKNQLLEEAGRNLAVAEAQNRMARELHDSISQGIHGIVFSLH 206 Query: 329 IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL 388 ++R+ + +E+ + +RRL+ L P L++ L +A+ Sbjct: 207 SLRRMVGKEGQEAEIINHLEETTQATMKELRRLIMELTPSPLEEQGLVEALELHADLFAR 266 Query: 389 EGR-GIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 + + LE+ L+ Q V ++R+ QE L N+ KHA A V + Q + ++L Sbjct: 267 RQQLAVDVSLEYNGG---LTPEQEVAVYRIVQEALANVQKHAGAHRVDVSLAQDGDVVIL 323 Query: 448 VIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 + D+G G QG GL M R GG L I GT V P Sbjct: 324 RVRDNGHGFNVDMAGQGQGLKNMSARARHGGGRLSIDSRPGEGTLVEAVFPLE 376 >UniRef50_Q4ZMH3 PAS n=6 Tax=Pseudomonas RepID=Q4ZMH3_PSEU2 Length = 670 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 6/220 (2%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD-NASV 340 ++ + L+ L E + +ARE+HD++GQ +T ++ + + + AD + + Sbjct: 444 ERRRAHDLLRELSAHLESVREEEKAHIAREVHDELGQMLTVLKLETSMCELAYADLDPGL 503 Query: 341 KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR 400 + +++L ++ VR + LRP LD + AI R E I ++ Sbjct: 504 SERLDSMKRLIAQLFQLVRDVATALRPPILD-AGIASAIEWQARRFEAR-TQIPCLVQVP 561 Query: 401 IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS 460 + ALS+ + +FR+ QE L N+++HA A V + QD + + I DDG G S Sbjct: 562 DNLPALSDARATGMFRILQEALTNVMRHARAHTVEISLTLQDGMMCMSIADDGQGFVIES 621 Query: 461 GQQ-GFGLTGMRERVTALGGTLHISC--LHGTRVSVSLPQ 497 G+ FGL GMRERV LGG L + GT + +P Sbjct: 622 GRAVSFGLVGMRERVLMLGGRLELDSEVGEGTTLRAYIPL 661 >UniRef50_B7AAT7 Histidine kinase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT7_THEAQ Length = 564 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 14/266 (5%) Query: 235 TLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLA 294 + + + P L A L ++L ++ A+ L Sbjct: 306 GVAVPVPPHGALVLHGRPEVEEAWLRAFLEALAGPLATALENARLYEALAEKEAQRARLL 365 Query: 295 ERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGV 354 + L+ +E R +ARELHD++GQ +T + + + +++L+ Sbjct: 366 KAWLKAQEEERARIARELHDEVGQALTGLILGLEGLP---------GDRVEALKELARHT 416 Query: 355 YDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTL 414 VRRL LRP LD L LE A+R +RE E G+ L + L + + Sbjct: 417 LTEVRRLALDLRPSVLDHLGLEAALRRYVREF-AERTGVEVDLSLHLT-RPLPQELETVV 474 Query: 415 FRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGF-GLTGMRER 473 +RV QE L N+ +H+ + ++ + + + +ED+G G P + G GL GMRER Sbjct: 475 YRVVQEALTNVARHSGSPQASVGVVEVLGEVRVFVEDEGRGFDPEAVDPGRQGLLGMRER 534 Query: 474 VTALGGTLHISCLH--GTRVSVSLPQ 497 V LGG L + GTRV V LP Sbjct: 535 VELLGGRLSVESAPGQGTRVQVRLPI 560 >UniRef50_Q1AZP1 Periplasmic sensor signal transduction histidine kinase n=2 Tax=Actinobacteria (class) RepID=Q1AZP1_RUBXD Length = 508 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 114/286 (39%), Gaps = 11/286 (3%) Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRE 278 + + G + L + ++ ++ LL + Sbjct: 214 VPVSSLPPGERSPLEGRGVGSVLVVPLSPPGGGFRGLLTVASRRRRAFSRSDVRTYAAAA 273 Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADN 337 +L E R A R R+ +A E+HD + Q T+I T L D Sbjct: 274 GMAALVLENLRLVERARRAGVL--EERQRLAHEIHDTLAQGFTSIVTNLEAAGGALQRDR 331 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 A++++ + ++ RRL+ LRP L++ L +A+R L GI + + Sbjct: 332 AALRRHLEQALAVARESLSEARRLVWALRPEPLEEAPLPEALRRLAARWSS-SSGIPARV 390 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + AL + VTL RV QE L N+ KHA A V + +R+ L + DDG G Sbjct: 391 LVTGEPRALPADPEVTLLRVAQEALANVRKHARAGRVAITLSYIGDRVALDVRDDGVGFD 450 Query: 458 PGSGQQ-----GFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 P + GFGL MRERV GGTL + GT +S +P Sbjct: 451 PAAPSPGDDGSGFGLRSMRERVGRAGGTLSVESAPGEGTVLSAEVP 496 >UniRef50_Q314U9 Histidine kinase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314U9_DESDG Length = 387 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 6/221 (2%) Query: 282 SLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASV- 340 ++ R + L+ ++L +E R+ + RELHD + QT++ I+ + + + Sbjct: 164 EQKQISRRLRRLSAQVLSAQEEERKRIGRELHDSMAQTLSGIKFMLEGERSRLEQSGTGW 223 Query: 341 -KQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW 399 + + RR++ LRP LDDL L A+R L +EM + + Sbjct: 224 PTERISKTIEYVQHAIVETRRIVMDLRPTVLDDLGLIAALRWLQQEMS-QIHSLTITSHL 282 Query: 400 RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP-P 458 + E+ALS+ Q+ LFRV QE LNN+++H+ + + + Q E ++ + D+GSG Sbjct: 283 SLPENALSDVQKSVLFRVAQEALNNVIRHSGSDSARISLEQVGEECVMTVTDNGSGFDRL 342 Query: 459 GSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 + + G GL MRER+ + G L I GT V +P Sbjct: 343 DNTRNGIGLDSMRERLELICGRLDIVTEKGIGTVVRAVVPL 383 >UniRef50_B0CC26 Two-component sensor histidine kinase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CC26_ACAM1 Length = 422 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 96/420 (22%), Positives = 149/420 (35%), Gaps = 51/420 (12%) Query: 126 QSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVS--------- 176 L H L L G L H+ + P G Sbjct: 2 SRLFRSNHPFHLLLYLEWILLGVALLTLFVPFPRHHFLLPHFTPRGALRFPLGIFLSILA 61 Query: 177 -------QPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQ 229 PI+ + V Y L + W + + F L + +I + + Sbjct: 62 LAGLGLKLPIHQSQKVKVLYTCLGFLLCWATVFMGGRFRDFFTPMLLIVVIRACLLFPCR 121 Query: 230 GALIATLMNAIALIAS-------------------QTWRDHPVDLLLSL---------LV 261 LIA + + + R P +LL SL LV Sbjct: 122 QRLIAASVAYGSFLVRLMTGAQRMRPFPRLGPPPPWRSRGLPQELLASLQIRSALLFGLV 181 Query: 262 QSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLL-ETEESVRRDVARELHDDIGQTI 320 L++GA + R+ L R + A + + R +ARE+HD +G ++ Sbjct: 182 LVFVFLMVGALLTE-RQSRTELAAANQRLRQYALMIENQATLQERNRIAREMHDSVGHSL 240 Query: 321 TAIRTQAGIVQR-LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAI 379 TA Q V +A+D A L VR + LR L +L QA+ Sbjct: 241 TAQSIQLENVDVWMASDRAKATDHLAKARSLGKEALQNVRHTVATLRNNPLQGQSLSQAL 300 Query: 380 RSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGW 439 L +E E I ++ + L+R+ QE L N+ KH++A+ VT++ Sbjct: 301 SHLTQEFE-RTTSIQVQFSTHLE-MPVPREMAAALYRLVQEALTNVSKHSEATQVTIELT 358 Query: 440 QQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +Q+ L L I D+G G P GFGL GM+ER ALGG + G + + +P+ Sbjct: 359 EQEMELSLNISDNGKGFLPEKNTTGFGLQGMQERTVALGGLFELWSQPQTGCHIQIKIPR 418 >UniRef50_C9RWH5 Integral membrane sensor signal transduction histidine kinase n=13 Tax=Bacillaceae RepID=C9RWH5_GEOSY Length = 344 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 17/311 (5%) Query: 196 SLWLQLGLPDELSRFTPFCLALPIIALAW-----HYGWQGALIATLMNAIALIASQTWRD 250 SLW Q + F IA+ A++ L + + R+ Sbjct: 34 SLWDQTVMGLPFLLFVFAVSLCMGIAVGLMLDSFFRKQWQAVVQALRHIEQGEMGELHRE 93 Query: 251 HPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAR 310 P L L Q + L +++ + + + ++ + + L ER+L R +AR Sbjct: 94 EPPPELQELWRQIVK--LQTQWLEQTKRVQKLAAEKAEQEERLVERILS---EERTRLAR 148 Query: 311 ELHDDIGQTITAIRTQAGIV-QRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQ 369 ELHD + Q + A V + + D+ ++ +++EQ+ +R LL LRP Sbjct: 149 ELHDSVSQQLFAASMMMSAVMETMPPDDERHRKQLKMVEQMIHQSQLEMRALLLHLRPVH 208 Query: 370 LDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHA 429 L +L++ + L+ E+ + + ++W+I++ +L + LFR+ QE L+N ++HA Sbjct: 209 LKGKSLQEGMNELLTELAGK---VPLEMKWKIEDISLDKGVEDHLFRILQESLSNTLRHA 265 Query: 430 DASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG-FGLTGMRERVTALGGTLHISC--L 486 A ++ + ++D +L + DDG G + G +GL M ER +GG L I Sbjct: 266 KAKSLEVLLIERDGFAILRVTDDGVGFDVERSKSGSYGLQHMYERAAEIGGMLKIVSLKG 325 Query: 487 HGTRVSVSLPQ 497 GTR+ V +P Sbjct: 326 QGTRLEVKVPL 336 >UniRef50_A9B913 Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B913_HERA2 Length = 695 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 15/310 (4%) Query: 194 VISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPV 253 +++ LQ P L +P + + + ++ P Sbjct: 383 ILTTLLQTAQPYLHHDQASSFLRVPAAPAWTAFPILAR--GCCLGIVQILHGVQTAIRPG 440 Query: 254 DLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELH 313 DL + + + + + +L + + + Q L +L+ T+E+ R +ARELH Sbjct: 441 DLHFAQALIAHAAVAIDQA-----QLLADVHESEDQLQRLTHQLVTTQETERAALARELH 495 Query: 314 DDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDL 373 D +GQ +T ++ + + + VR+L +RP L+DL Sbjct: 496 DGVGQALTGLKLYLES--TPLQPITVWRDRIHEATGQVIDILSQVRQLSLDIRPAALEDL 553 Query: 374 TLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASA 433 L +++ L++ +E + G+V L L + L+RV QE +NN+V++A+ + Sbjct: 554 GLMVSLQWLLQRVEQQ-TGVVIALHPYTPIPPLPHAIELALYRVIQEAVNNLVRYANVAT 612 Query: 434 VTLQGWQQDERLMLVIEDDGSGLPPGSG---QQGFGLTGMRERVTALGGTLHISCL--HG 488 + + L+I+D G G +G GL GMRER+ LGGTL I HG Sbjct: 613 AAIYFGVTTTGVSLLIQDHGRGFDVAQVCQMPRGIGLVGMRERIRMLGGTLTIESALGHG 672 Query: 489 TRVSVSLPQR 498 T ++V +P R Sbjct: 673 TSLTVDVPCR 682 >UniRef50_A6T1A4 Signal transduction histidine kinase n=2 Tax=Oxalobacteraceae RepID=A6T1A4_JANMA Length = 678 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 15/248 (6%) Query: 267 LLLGAGIQRLRELNQSLQKELARNQHLAE-----------RLLETEESVRRDVARELHDD 315 + + I + + SL+ + + L L T E +R +ARELHDD Sbjct: 412 VGISTDITERKRMEDSLKAHETQLEALVAARTFEVSELIGHLETTREEEKRSIARELHDD 471 Query: 316 IGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTL 375 +G +TA+ ++ + + I+ L + DA RR+ LRP +LD + Sbjct: 472 LGSALTALNMHLSLLFQQMPPEPKFTERSLKIKALLSSITDATRRIQNGLRPDKLDVFGV 531 Query: 376 EQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVT 435 + AI E E + G+ + D + + LFR+ QE LNNI KHA A+ V Sbjct: 532 KVAIAEQAAEFE-KYTGVTCNASLPDDRLIYAPRVDIALFRMVQESLNNIAKHAQATHVD 590 Query: 436 LQGWQQDERLMLVIEDDGSGLPPGSGQ-QGFGLTGMRERVTALGGTLHISC--LHGTRVS 492 + ++ ++L I D+G G+P GL GMRER LGG++ ++ GT ++ Sbjct: 591 VVLDDTEDEILLTIRDNGVGMPTAQSGVMTHGLRGMRERAGYLGGSVQVTSVVGRGTTIA 650 Query: 493 VSLPQRYV 500 +S+P+ V Sbjct: 651 ISIPKTAV 658 >UniRef50_Q1GZT2 Putative signal transduction histidine kinase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT2_METFK Length = 479 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 7/237 (2%) Query: 269 LGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG 328 + I + R Q++++ + L+ +L + +E R +A+E+HDD+G +TAIR Sbjct: 238 IMTNITQSRREQQAIRESHEKLARLSAQLAQIKEKERLKIAQEVHDDLGGNLTAIRLGLS 297 Query: 329 -IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREME 387 +++RL + + + +E + ++A R+ LRP L+ L + A+ + Sbjct: 298 SMIKRLGPEQEVLLAKARQLEAIVDDTFEAAHRIASDLRPNVLE-LGIVAALEWQATQF- 355 Query: 388 LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLML 447 ++ GI + E +S + +TLFR+CQE ++NI K+A AS V + E +M+ Sbjct: 356 VDKIGIPCEFVCNVAEVDISTDHAITLFRICQEAMSNIAKYAKASHVEVTLEASAEEIMM 415 Query: 448 VIEDDGSGLPPGS--GQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRYV 500 + DDG G+ P FG++GM ER AL G + GT VSV+LP V Sbjct: 416 QVIDDGIGIAPVDRLKANAFGISGMSERAVALAGQCKVQAGRQGGTIVSVTLPLHPV 472 >UniRef50_B0UCY8 Integral membrane sensor signal transduction histidine kinase n=4 Tax=Methylobacterium RepID=B0UCY8_METS4 Length = 700 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 13/229 (5%) Query: 281 QSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAAD---N 337 + ++ A + L RL + +E +R +ARELHD +GQT+T + ++ L A Sbjct: 461 EPRKRAEAAHHDLLRRLAQAQEDEQRRIARELHDQVGQTVTGLSLGLKGLEDLLARGPSP 520 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 + + ++ L+ + + R LRP LDDL L A+ +L + G+ + Sbjct: 521 PRARDQVRWLQGLAGEIGRDIHRTASDLRPSALDDLGLVNALAALGADWTAR-YGLGVDV 579 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + + L ++RV QE L N++KHA A+ V++ ++ ERL +VIEDDG+G Sbjct: 580 QAFGLSARLPLEVETAMYRVAQEALTNVLKHARATHVSVVLERRGERLGVVIEDDGTGFD 639 Query: 458 PGS-------GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 P + + GL+ +RER++ +GGTL + GT + + +P Sbjct: 640 PEACAPPAEGRPRRLGLSSIRERLSLIGGTLRVESAPGSGTTLFIDVPL 688 >UniRef50_D1A2S1 Histidine kinase n=2 Tax=Streptosporangineae RepID=D1A2S1_THECD Length = 405 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 85/358 (23%), Positives = 136/358 (37%), Gaps = 17/358 (4%) Query: 159 WHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP 218 H A + + + V+ P+ R + L+ L L S + Sbjct: 48 RHLRAPDALNAVIVAAVTLPLALRRTAPMAVLVFITAGEVLLAWLGYPSSPADVAAFLIA 107 Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTG--LLLGAGIQRL 276 + +LA H G +L+ ++ A V LL + +L G +LG ++ Sbjct: 108 LYSLAAHRGLAHSLLGGVLAFAAFNLMIVVHRTSVSLLDYVTNSALLGGVWVLGRNLRLR 167 Query: 277 RELNQSLQKELARNQHLA-ERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQR-LA 334 R L+ AR + + R +ARELHD + ++ + QAG +R L Sbjct: 168 RAYLAELEDRAARLEQVRGTDARAARMEERSRIARELHDVVAHHVSVMTVQAGAARRILD 227 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRP-----RQLDDLTLEQAIRSLMREM-EL 388 S +++ IE++ +RR++G LR L+ + I L + + Sbjct: 228 RSPESAREAMTTIEEVGRTALSEMRRIVGVLRTERDGEEVGGQLSPQPGIADLGELIDHV 287 Query: 389 EGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADA-SAVTLQGWQQDERLML 447 G+ +L LS + FR+ QE L N +KHA + ++ D L + Sbjct: 288 RETGLSVNLWIEGQARTLSPGVDLAAFRLIQEALTNTLKHAGPQARAWVRLHYTDTDLTV 347 Query: 448 VIEDDGSGLPP----GSGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLPQRY 499 IED+G G G+ G GL GM ERV GG L I G V P Sbjct: 348 EIEDNGRGAETLLSGNGGRPGHGLVGMYERVALYGGELRIGPRVGGGFGVRARFPLEA 405 >UniRef50_A0QSI7 Sensor histidine kinase n=6 Tax=Mycobacterium RepID=A0QSI7_MYCS2 Length = 413 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 19/272 (6%) Query: 234 ATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHL 293 L+ + + + P D+ L +++ L L L++ L +++ Sbjct: 140 GGLVGVLNVHTVRRREFTPRDVELLVVIGRLIAGAL-----HQARLHRQLVARERAHENF 194 Query: 294 AERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLG 353 E+++E +E RR +A ++HD I Q + + + R A D +V + +L+ Sbjct: 195 VEQVIEAQELERRRLAADIHDGISQRLVTLSYRLDAAARAADDPRAVAEQLGKARELADL 254 Query: 354 VYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVT 413 R + LRP LDDL L + SL R + L+ + ++ + ++ + Sbjct: 255 TLQEARAAISGLRPPVLDDLGLSGGLASLARSI------PQVDLDVDLADTRVPDHIELA 308 Query: 414 LFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ------QGFGL 467 L+R+ QE L N+VKHA A+ L +D L I DDG G G+GL Sbjct: 309 LYRIAQECLQNVVKHARATTARLTFAVEDGIARLEIVDDGIGFDTFEHPLGSDEMSGYGL 368 Query: 468 TGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 M ER +GG L+I GT V+ ++P Sbjct: 369 LSMAERAEIVGGRLNIRSRPGAGTAVTATIPL 400 >UniRef50_B2UDW5 Multi-sensor signal transduction histidine kinase n=12 Tax=Burkholderiaceae RepID=B2UDW5_RALPJ Length = 485 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 8/285 (2%) Query: 219 IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRE 278 I +A +A IALI + V + ++T + ++ Sbjct: 167 IATVARSLEHAERDLALSRYGIALITAVNIILLVVLGMQHAKRLAVTERERDMAEEESQK 226 Query: 279 LNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADN 337 L++ +++ + LA L E + +ARELHD++G +TA + ++ R+ A+ Sbjct: 227 LDRMVRERTRQLSDLAAHLQRVTEDEKTRLARELHDELGAILTATKMDLHWLRSRIHANE 286 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 +V + + RRL+ LRP L +L L +A+ L ++ G + + Sbjct: 287 PAVSEKITRVMAHVDQGIQIKRRLIEDLRPTILLNLGLVEALSQLTEDVGTRN-GWHTEV 345 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 D L+++ + L+R+ QE L N K+A A+ V++ +E + L + D+G G P Sbjct: 346 SLPDDMPKLTDDAAIALYRIVQESLTNASKYAHATTVSVALDVGEEGVRLRVRDNGRGFP 405 Query: 458 PGSGQQ----GFGLTGMRERVTALGGTLHISC--LHGTRVSVSLP 496 ++ GL GM +R ALGGTL I G + V LP Sbjct: 406 ADIERRRMVGHHGLLGMEQRAIALGGTLVIDSMPGGGVTIIVELP 450 >UniRef50_C6E3E0 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter sp. M21 RepID=C6E3E0_GEOSM Length = 485 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 18/262 (6%) Query: 245 SQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESV 304 +Q W + ++ T L + I +E + + + L+ RL +E Sbjct: 225 TQRWYSVIELAVRMPGIERPTKLAVARDITVRKEAEEKV-------RALSHRLFSAQEDE 277 Query: 305 RRDVARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLG 363 RR ++RELHDD+GQ + A++ + L + ++ +VR + Sbjct: 278 RRHLSRELHDDLGQRLNAVKIGVDTLACDLPQLPPDFLSRVGYLSEILQSTIQSVRDICS 337 Query: 364 RLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI-DESALSENQRVTLFRVCQEGL 422 LRP L+ L QAI S E+ G+ ++ + L + L+RV QE L Sbjct: 338 GLRPSSLERRGLVQAITSDCAELASVH-GLKIDVKSSGMKKVLLDNEAEINLYRVFQESL 396 Query: 423 NNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSG------QQGFGLTGMRERVTA 476 +N+VKHA AS V++ + + IEDDG G P + ++G GL + ERV Sbjct: 397 HNVVKHAQASRVSVSLIASHPIVRMRIEDDGKGFAPCARVDGGGGERGLGLVSIAERVDL 456 Query: 477 LGGTLHISCLH--GTRVSVSLP 496 +GG+L + GTR+ V +P Sbjct: 457 MGGSLDVVSRPGVGTRIVVEIP 478 >UniRef50_C9LUT1 Sensor histidine kinase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT1_9FIRM Length = 414 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 8/231 (3%) Query: 275 RLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA 334 R +L +LQ++ L +L E RR ++RELHD+ Q++ +I I+ Sbjct: 180 RYAKLFGALQQKERLRLWLIGQLFSAREDERRRISRELHDETSQSMASILAYLRILHGKL 239 Query: 335 ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIV 394 ++ Q +L+ +++L L P L+DL L AI + + + Sbjct: 240 TTPEQ-RELLQEARELTSEALQGLKQLAVDLHPPLLEDLGLLVAIEKYIDTLRRTHGDLT 298 Query: 395 SHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGS 454 E + D + L + ++R QEGL NIV+HA A +++ + + + I DDG Sbjct: 299 VRWETQGDFTGLDRTLALVIYRSVQEGLTNIVRHAHAREASVKLRATAKEVCVEIADDGV 358 Query: 455 GLPPGSGQ-----QGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQR 498 G + + + GL M+ER L G+ + GTR+ + LP++ Sbjct: 359 GFEKDTAERARLDRHLGLVSMKERAELLEGSFAVESAPGAGTRLFLCLPRK 409 >UniRef50_C1XM57 Signal transduction histidine kinase, COG4585 n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM57_MEIRU Length = 430 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 89/395 (22%), Positives = 150/395 (37%), Gaps = 14/395 (3%) Query: 115 QGAALTAAALLQSLPWLWHGKESWNALL-LTLTGGLTLAPICLVFWHYLANNTWL---PL 170 L L+ + P W + G LA + +VFW + + Sbjct: 26 LSTVLAFTLLVPARPLEVPTVLPWQDPVQAAWRLGAALALLGVVFWAVRPGHRQAWEFAV 85 Query: 171 GPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQG 230 + + W ++ + +L L +I + + LP L + A Q Sbjct: 86 LILIGVVVVAWLSQNYLPFLALGLIPVVARYWLPLWAVLLIVLGLGALSVWWAQREPLQI 145 Query: 231 ALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLL--GAGIQRLRELNQSLQKELA 288 L S + P + L + L G + L L + ++ Sbjct: 146 TFEILLSPGPQGNTSWSALPTPAEYPNLSLAFFIFIAFLYSGYALFTLELLIREIRAREE 205 Query: 289 RNQHLAERLLETEE----SVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 + E + + R+ +ARE+HD + Q +I Q + + AS Sbjct: 206 LERTRRELEQTSRQAGILEERQRLAREIHDTLAQGFASIVVQLEAAEMASEHEASATHYL 265 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 + Q + RR++ LRP L++ +L +A++ L++ + E G+ + Sbjct: 266 EQARQAAREGLSEARRMVWALRPEILENTSLPEALQRLLQRWQQE-SGVRTQFTLTGTPR 324 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG 464 L V L R+ QE L NI KHA A L D+ +++ ++DDG GL G Sbjct: 325 PLHPELEVGLLRIAQEALTNIRKHAKARHANLTLSYLDDLVLMDVQDDGVGL-QAPTTGG 383 Query: 465 FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 FGL MRERV +LGG + + GT ++VSLP Sbjct: 384 FGLRLMRERVESLGGQMTLESEPGMGTTLAVSLPL 418 >UniRef50_B5JFN8 Histidine kinase domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN8_9BACT Length = 403 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 86/400 (21%), Positives = 158/400 (39%), Gaps = 20/400 (5%) Query: 112 LLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLG 171 A + A +L L L L A + ++ A + Sbjct: 4 GAFGLAMMLVALVLPFAYAENELGLGLTILQLILWAAFCAAWVFQGYFMEQAGIGFRYDQ 63 Query: 172 PSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWH----YG 227 ++ + R R +V YL +F + + + + + + F L + + Sbjct: 64 GTVDRSSLRARWREIVLYLFVFGPLCFAYVYVSFQNTGYFGFNYVLMFVLAGFSTLVFPV 123 Query: 228 WQGALIATLMNAIALIASQ--TWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRE------- 278 W + + + S+ +D +++ L ++ +R RE Sbjct: 124 WLALVYLVYQTIVWIFLSRFMWGGWMQIDDQVTMFSGLLFSSMMFYIFRRERESRSKAVA 183 Query: 279 LNQSLQKELARNQHLAERLLE-TEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-AAD 336 L L + + + + ++ E R +ARE+HD IG ++T + Q + L +D Sbjct: 184 LTLDLDEANEKLRAFSGQIEELAATQERNRIAREIHDTIGHSLTVVNMQLETSKALIDSD 243 Query: 337 NASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSH 396 K+ + ++++ VR + LR LD +L A+ +M G G+ + Sbjct: 244 KEKAKRFLEKAQEVTRQGLTDVRSSVASLRSSPLDGKSLPGALEGMMS--ASFGGGVKTR 301 Query: 397 LEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ-DERLMLVIEDDGSG 455 E + + +AL+ L+R QE L N+ KHADAS V L E + LV+ D+G G Sbjct: 302 FELKGEVAALNPASEAALYRSAQEALTNVRKHADASEVKLSLDFSFPECVKLVVADNGKG 361 Query: 456 LPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSL 495 + GFG+ G+RER+ L G + +S G + +SL Sbjct: 362 --SEKVEGGFGIMGIRERIQLLDGEMRVSTSPGQGLELSL 399 >UniRef50_C9NA65 Histidine kinase n=5 Tax=Streptomyces RepID=C9NA65_9ACTO Length = 402 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 87/388 (22%), Positives = 140/388 (36%), Gaps = 31/388 (7%) Query: 138 WNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISL 197 W LLL +G + +S + R R LLL ++ Sbjct: 19 WAVLLLGFSGVSIVTDQIGAG----PERVAAVPIAVGLSFVVALRRRVPERMLLLAIVMG 74 Query: 198 WLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHP----- 252 QL L L + W L A A I+ W D Sbjct: 75 LAQLVLGVRPGVADFAMLVITYTVATVGERWASRLALGCSLAAAGISRLRWPDDAPYGGW 134 Query: 253 ---VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARN-QHLAERLLETEESVRRDV 308 + ++ + V + +LG I+ R L++ AR + + + R + Sbjct: 135 AQTLGYVVIMTVPFVLAWVLGDSIRTRRAYFSQLEERAARLEREREAQSKVAVAAERARI 194 Query: 309 ARELHDDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRP 367 ARELHD + ++ + QA + + +Q+ + I +RRLLG LR Sbjct: 195 ARELHDVVAHNVSVMVVQADGAAYVMDSSPDQARQALETISGTGRQALAEMRRLLGVLRT 254 Query: 368 RQLDDLTL------EQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEG 421 ++ + I L+ ++ G+ + L +T +R+ QE Sbjct: 255 GDSEESGEYVPQPDVEQIEELVGKV--RETGLTVDFKIEGTPRPLPSGVELTAYRIVQEA 312 Query: 422 LNNIVKHADASA-VTLQGWQQDERLMLVIEDDGSGLPPG------SGQQGFGLTGMRERV 474 L N KH A +++ D+ L L++EDDG G P + G G+ GMRERV Sbjct: 313 LTNTRKHGGPDAGASVRLVYFDDGLGLLVEDDGRGAPHELYEDGGADGAGQGMIGMRERV 372 Query: 475 TALGGTLHISCLH--GTRVSVSLPQRYV 500 +GGTL G R+S LP + Sbjct: 373 GMVGGTLDAGPRQGGGFRISALLPLKPA 400 >UniRef50_UPI00017893B7 integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017893B7 Length = 357 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 10/295 (3%) Query: 211 TPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLL-- 268 L L I L YG+ + W + ++ + + G L Sbjct: 50 AGITLVLLPIGLGAIYGFFQGYRVKRRVDLVRETLVNWEKGSLTDVMPDIGEDEVGRLGE 109 Query: 269 -LGAGIQRLRELNQSLQKELARNQHLAERL-LETEESVRRDVARELHDDIGQTITAIRTQ 326 L +R + SLQ+ N LAE+ + R+ +ARELHD + Q + AI Sbjct: 110 QLVKISKRWEDQVSSLQRLSTNNAQLAEQARVTAIVEERQRLARELHDAVSQQLFAISMT 169 Query: 327 AGIVQR-LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMRE 385 A V R L D ++ LIE++S +R LL LRP L+ LEQ +R L+ E Sbjct: 170 ATAVGRTLDKDFDKAQRQVALIEEMSAVAQSEMRALLLHLRPVYLEGKALEQGLRDLITE 229 Query: 386 MELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERL 445 + ++ + E D L + LFR+ QE ++N ++H+ A + ++ ++ + Sbjct: 230 LRIKVP-MEITFEMDDDIHLL-KGIENHLFRIIQEAMSNTLRHSKAEKMDIRIHRRQNTV 287 Query: 446 MLVIEDDGSGLPPGS-GQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +++ DDG G Q +GL+ M+ERVT +GG+L GTR+ + +P Sbjct: 288 RVMLRDDGVGFELDDKKQTSYGLSTMQERVTEIGGSLQFITAPGKGTRIEIIVPL 342 >UniRef50_B5I029 Sensor kinase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I029_9ACTO Length = 399 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 84/403 (20%), Positives = 152/403 (37%), Gaps = 31/403 (7%) Query: 107 RDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNT 166 + T AL+ ++ + + +T L P+ Sbjct: 9 GAYSWDRSFRLWDTYFALIWLATLVFVLGTGYPEWSIRVTAAALLVPLV---------PL 59 Query: 167 WLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHY 226 ++ +G L+ Q L++ + + L + + + +P + Sbjct: 60 FVRVGRPLLRQDPPLGREALLYLGAMLALFLPSAILVGETR---LMTFALVPQCFMTLRM 116 Query: 227 GWQGALIATLMNAIALIASQTWRDHPVDLL---LSLLVQSLTGLLLGAGIQRLRELNQSL 283 W +A + A + + W ++ L +V + + +G+ + R+ E +Q Sbjct: 117 RWALTAVAVINLAPVVGWALVWWPSDQEVFFNGLFAVVTLVFSVAVGSYVIRIIEQSQER 176 Query: 284 QKELARN---QHLAERLLETEES--VRRDVARELHDDIGQTITAIRTQAGIVQ-RLAADN 337 +A +H RL + R +ARE+HD + Q T++ V+ L D Sbjct: 177 AALIAELDASRHEVSRLSAAHGALTERERMAREIHDTLAQGFTSLLMLVQAVEAELDHDV 236 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 + ++ L+++ + R L+ P L+ +L A+ L + L Sbjct: 237 SQARRHLALMDETARLNLAEARALVADGTPADLEGSSLPDALCRLAARHAAK-------L 289 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHAD-ASAVTLQGWQQDERLMLVIEDDGSGL 456 + L V R CQE L N KHA A+AV + D+ L L + DDG G Sbjct: 290 DVTGQVRPLPAGPEVVALRSCQEALTNCRKHAGSAAAVGIGLAYADDSLTLFVRDDGHGF 349 Query: 457 PPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 PG+ G+GL G+R R GGT+ + + GT V+V LP Sbjct: 350 DPGAVHDGYGLAGLRARAAEAGGTVRVHSVPGDGTTVTVRLPI 392 >UniRef50_C7RKP8 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP8_9PROT Length = 595 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 8/233 (3%) Query: 271 AGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV 330 I + ++ Q L +N L +L++T+E R +ARELHD++ Q +TAIR A + Sbjct: 362 QDITERKLAERATQVLLDQNTRLVRQLMDTQERERVALARELHDELAQHLTAIRAFAAAI 421 Query: 331 QRLAADN-ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELE 389 QR A + + + I+ + +Y+ RL+ L P LD + +A+ SL+ + Sbjct: 422 QRDKATPHERILAAARAIDVSARDIYEVSHRLMEGLHPSILDAGCISEAVGSLLAGWGQQ 481 Query: 390 GRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQ----DERL 445 I +R+ ++R+ QE L+NIV+HA A V + + RL Sbjct: 482 HPEIEWRASLAAGLMC-DGPRRLAIYRIVQECLSNIVRHARAERVRIVLATRRGPDGGRL 540 Query: 446 MLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLP 496 LVI DDG G+ G+ Q GFGL GMRERV +LGG+L IS GTRV V LP Sbjct: 541 RLVIRDDGIGMDVGAAQTGFGLLGMRERVLSLGGSLQISSGRGAGTRVRVLLP 593 >UniRef50_A9BNQ5 Histidine kinase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BNQ5_DELAS Length = 470 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 85/314 (27%), Positives = 130/314 (41%), Gaps = 28/314 (8%) Query: 199 LQLGLPDELSRFTPFCLALPIIALAWHYGW-------QGALIATLMNAIALIASQTWRDH 251 Q P L + W G + AL +A A IA+ WR Sbjct: 147 YQWQKPSSLRTEAKLAYVATVPEWGWSLGTGLYLDDVEQALRQIDESAQANIAATRWR-I 205 Query: 252 PVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARE 311 L +++ + GL+ R+ + Q LA+R++ ++E R VAR+ Sbjct: 206 FGIAALCIVLIGVAGLVFNLSDHRV---------SSNKLQRLAQRVVHSQEEERTRVARD 256 Query: 312 LHDDIGQTITAIRTQAGIVQR-----LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 LHD + Q + + + Q A D A+ ++ + +RR+ LR Sbjct: 257 LHDGVVQVLVSSKFLLETAQAQLRRLAAQDPATAQRMVDQGLEQLNHALVEIRRVSHGLR 316 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P LDDL L A+ + ++M+ E G+ R + L + LFRV QE + N Sbjct: 317 PALLDDLGLAPALALMSQQMQAED-GLRMQFGCRGETRFLPPSHATALFRVAQEAVTNAQ 375 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQ----GFGLTGMRERVTALGGTLH 482 HA A+ + + Q R++L + DDG G Q+ G GL MRER+ LGG L Sbjct: 376 NHAQATRIDVSLHFQRRRVVLQVSDDGQGFDMRRVQRDRQGGIGLRNMRERIEGLGGHLS 435 Query: 483 ISC-LHGTRVSVSL 495 IS GTR+ L Sbjct: 436 ISSGRRGTRLVAVL 449 >UniRef50_D1VBH0 Histidine kinase n=1 Tax=Frankia sp. EuI1c RepID=D1VBH0_9ACTO Length = 435 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 95/449 (21%), Positives = 150/449 (33%), Gaps = 43/449 (9%) Query: 68 WLLIYWLTQAVGLTHFPLLMIGSLLTLLPVA--LISRYRHQRDWRTLLLQGAALTAAALL 125 + + W + + + + P R R R W + GA+ A L Sbjct: 4 FSIHGWTPEPRAAPTLETMSMSAASATPPAGAPWFERVRLGRRW---AVVGASPRQAFAL 60 Query: 126 QSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRH 185 + L L P + Y + G L P+ R R Sbjct: 61 D---------LALTVGTFALFTVPELTPALGLGRGYGSPAAVAVFGA-LAVVPLLARRRW 110 Query: 186 LVWYLLLFVISLWLQLGLPDELSRFT----PFCLALPIIALAWHYGWQGALIATLMNAI- 240 L+ L + F P + + Sbjct: 111 PTATLVGVTAVLCAAALAGVRFTPFVSNAGPALVLAAGTVASRRPRRASLAACAAAAVAT 170 Query: 241 ---ALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERL 297 L+A D D + LV G L G ++ RE + L+ LAR + AE Sbjct: 171 SAAGLVAFLLHTDQDQDAVQLALV--AVGWLAGDALRVRREYHDGLE--LARRRERAEHE 226 Query: 298 LETEESVRRDVARELHDDIGQTITAIRTQAGIVQRL-------AADNASVKQSGQLIEQL 350 R ++R++HD + T++ I +AG+ + L A + ++ +IE Sbjct: 227 HRVRAEERLRLSRDVHDIVSHTLSMITVRAGVARHLLARGPDGPARPDTAAEALAVIETA 286 Query: 351 SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMEL-EGRGIVSHLEWRIDESALSEN 409 S D +RR+L + R DL + + ++ G G+ + L Sbjct: 287 SRSALDELRRVLRQSRVAATADLAATPTLADVPALLDTVRGHGLAVTFSAEAGATPLPSA 346 Query: 410 QRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTG 469 +RV QE L N+ +HA A+ + + L++ + DDG G P G GLTG Sbjct: 347 -----YRVVQEALTNVTRHAAATQAWVDIEHRPGELVVTVRDDGRG-QPAGSGPGLGLTG 400 Query: 470 MRERVTALGGTLHISCL--HGTRVSVSLP 496 MRER LGGTL G V P Sbjct: 401 MRERAELLGGTLAAGSRSGGGFEVVAVFP 429 >UniRef50_B7L2Y8 Histidine kinase n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L2Y8_METC4 Length = 478 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 87/397 (21%), Positives = 150/397 (37%), Gaps = 7/397 (1%) Query: 107 RDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNT 166 R+ G A N + LT G T + Sbjct: 55 RELTWRGSAGRYAKYAFPDWRSSHTLRFISPGNCVALTWEGEATQTQCSGLETAGGPAPA 114 Query: 167 WLPLGPSLVSQPINWRGRHLVWYL--LLFVISLWLQLGLPDELSRFTPFCLALPIIALAW 224 W + P R + V++ + ++ R + Sbjct: 115 WFEALHRSLLGPSEPVRRSITLNRREAGTVVATPDPGAMVRQVWRQVRILVGTASAMAIC 174 Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 +I + A+I R DL + + L + + L L+ Sbjct: 175 IGLLATVVIGWTLRPAAVITRVLARLEQGDL--AARLPRLRSGEFDRIARAVNALGHRLE 232 Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 + A + L +RL + +E RR +ARELHD+ GQ +TA A ++ A D + + Sbjct: 233 RSTAERKVLTQRLFQVQEEERRTLARELHDEFGQCLTATGALAAAIEAGAPDRPDLHEDA 292 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 + I +++ + +R L LRP L++ L++A++ L+ + L + S Sbjct: 293 RAISRITRQMMQTLREALAHLRPPDLEEFGLQRALQRLVATWQRRET-PTLRLAVDGNLS 351 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG-SGQQ 463 + ++L+RV QE L N V+H + V++ + + +++ DDG G+P G + Sbjct: 352 GVPGPVALSLYRVVQECLTNAVRHGRPTDVSVHLGVSVDAVTVIVRDDGGGVPGDIIGAE 411 Query: 464 GFGLTGMRERVTALGGTLHISCLH-GTRVSVSLPQRY 499 G GL GMRERV ALGG L I G + +P Sbjct: 412 GHGLLGMRERVEALGGRLWIGSAGSGFGIEAIIPIAG 448 >UniRef50_C1DEQ8 Periplasmic sensory histidine protein kinase, two-component n=3 Tax=Proteobacteria RepID=C1DEQ8_AZOVD Length = 458 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 122/288 (42%), Gaps = 11/288 (3%) Query: 217 LPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGI--- 273 L + + +GW L + A++ RD + S +V T L + Sbjct: 161 LAYVVMLEPWGW--MLGTGIYLEDVERATRQVRDEVAGGIRSTMVAIATIALAAVLLVFA 218 Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIV-QR 332 L + + + Q L R++ +E R V+RELHD I Q + +I+ Q + + Sbjct: 219 GGLTLSVREHRLADGKLQSLNRRIVHLQEEERSRVSRELHDGISQLLVSIKFQFELAGHQ 278 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 L A ++ + G +RR+ LRP LD L L AI L E E Sbjct: 279 LEAGHSGGLAILGQATERLGGAIGEIRRISHDLRPSLLDTLGLPAAIGQLATEFEQRCA- 337 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 + + ++ L + V LFR+ QE L NI +HA A +V + + L + DD Sbjct: 338 LSVVYRNSLHDARLPDEVAVALFRIVQEALTNIERHARAGSVLIDLEPCVSGVQLRVRDD 397 Query: 453 GSGLPP---GSGQQGFGLTGMRERVTALGGTLHISCLHG-TRVSVSLP 496 G G P Q+G GL +RER+ LGG +S G T + V LP Sbjct: 398 GIGFDPRTIERAQEGIGLRNIRERIEHLGGRFSLSSSTGHTGICVILP 445 >UniRef50_C5ATJ2 Sensor histidine kinase n=1 Tax=Methylobacterium extorquens AM1 RepID=C5ATJ2_METEA Length = 481 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 95/399 (23%), Positives = 155/399 (38%), Gaps = 8/399 (2%) Query: 107 RDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNT 166 R+ G A N + LT G T + Sbjct: 55 RELTWRGSAGRYAKYAFPDWRSSHTLRFISPGNCVALTWEGEATQTQCSGLETAGGPAPA 114 Query: 167 W-LPLGPSLVSQPINWRGRHLV-WYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAW 224 W + L L+ R ++ V++ + ++ R + Sbjct: 115 WFVVLHRHLLGHGEPVRRSIILNRREAGTVVATPDPGAMVRQVWRQVRVLVGTAFAMAVC 174 Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 +I + ALI R DL + V L + L L+ Sbjct: 175 IGLLATVVIGLTLRPAALITRVLARLEHGDL--AARVPRLRPGGFDRIAGAVNALGHGLE 232 Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSG 344 + A + L +RL + +E RR +ARELHD+ GQ +TA A ++ A D + + Sbjct: 233 RSTAERKALTQRLFQVQEEERRALARELHDEFGQCLTATGALAAAIEAGAGDRPDLHEDA 292 Query: 345 QLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES 404 Q I +++ + +R L LRP L++ L++A++ L+ + L D S Sbjct: 293 QAISRITRQMMQTLREALAHLRPPDLEEFGLQRALQRLVATWQRREA-PAFRLAVDGDFS 351 Query: 405 ALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ-Q 463 + ++++R+ QE L N V+H + V +Q E + +V+ DDG G+P + Sbjct: 352 GVPGPVALSVYRIVQECLTNAVRHGRPTEVDVQLGVSAEEVFVVVRDDGGGVPADTDGVD 411 Query: 464 GFGLTGMRERVTALGGTLHISCLH-GTRVSVSLPQ-RYV 500 G GL GMRERV ALGG L I G R+ +P R+V Sbjct: 412 GHGLLGMRERVEALGGRLRIGSARNGLRIEAVIPIARHV 450 >UniRef50_D1BSG5 Histidine kinase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BSG5_XYLCX Length = 384 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 87/371 (23%), Positives = 145/371 (39%), Gaps = 18/371 (4%) Query: 142 LLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQL 201 L + GGL LA + F + + +V+ R L + V +WL L Sbjct: 14 LAAVVGGLGLAETWVPFESVFGVGSPVVSTVGIVAAAALLSQRRLRPAASIGVFVVWLAL 73 Query: 202 GLPD-------ELSRFTPFCLALPIIALAW--HYGWQGALIATLMNAIALIASQTWRDHP 252 G+ + PF +AL +A W GA A L A ++ + Sbjct: 74 GVATLGELHALFFGQIVPFMVALYSLARHGAPRVAWSGAASAALTLVFADLSMPVLQSFD 133 Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVAREL 312 + ++ + G R + +++ A + ER + R +AREL Sbjct: 134 EIVFHWTVLAVAFAVGWGLRTSEDRAIAAAVRASEAEARS-RERTIAAIADERARIAREL 192 Query: 313 HDDIGQTITAIRTQAGIVQRLAADNAS-VKQSGQLIEQLSLGVYDAVRRLLGRLRPR--- 368 HD + +++ + QAG + D+ + +++ + I D VRR++ LR Sbjct: 193 HDVLAHSVSMMVVQAGAAAEVVEDDPAFARRALESIRATGTESLDEVRRVVSILRAPDDA 252 Query: 369 -QLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVK 427 LD + L+ E+ GI L D A+ + ++R+ QE L N+ K Sbjct: 253 AGLDPQPGIAGLHGLVEEV--RAAGIAVDLAVTGDVEAVPPGLALAVYRIAQESLTNVRK 310 Query: 428 HADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH 487 HADA+A T++ + + + + DDG + G G+ GMRER GG L Sbjct: 311 HADATAATVRVECGSDAITVAVIDDGRRTAEQVLEPGHGIIGMRERAGVYGGRLDARRTP 370 Query: 488 -GTRVSVSLPQ 497 G V LP Sbjct: 371 DGFAVHAVLPW 381 >UniRef50_C1YQX8 Signal transduction histidine kinase, COG4585 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQX8_NOCDA Length = 403 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 87/372 (23%), Positives = 147/372 (39%), Gaps = 17/372 (4%) Query: 140 ALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWL 199 LL TG L + W + + WR + L+ V++ + Sbjct: 18 GLLAASTGSTALVSALQREAGAVNPWPWGHALILVACLAVLWRTAYPCVAGLVSVVASTV 77 Query: 200 Q--LGLPDELSRFTPFCLALPIIALAWH-YGWQ-GALIATLMNAIALIASQTWRDHPVDL 255 LG PD + + ++ + +GW G +N+ + + T+R + + Sbjct: 78 YYPLGFPDGMVMLCTAVMLYTLVRWGYRVFGWTLGVGQFVAVNSYEFLMTGTFRPEAIGI 137 Query: 256 LLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDD 315 + +LV TG ++ + LR ++E + E LL R +AR++HD Sbjct: 138 VGWVLVLLCTGEVVRWRQEYLR---ADHEREAESLRTREEELLRRASEERVRLARDVHDT 194 Query: 316 IGQTITAIRTQAGIVQRLAA-DNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD-- 372 + I+ I QAG L + ++ I+Q S +R +LG LR +D+ Sbjct: 195 VAHNISLINVQAGTALYLMETEPQRAAEALATIKQTSKDTLVELRGMLGVLR--AVDEAA 252 Query: 373 -LTLEQAIRSLMREME-LEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHAD 430 + + L E GI +E L + +R QE L N+V+H+ Sbjct: 253 PRSPVPGLDRLEELAEGTRRAGIDVVVEVSGVPGHLPVSTESAAYRTVQEALTNVVRHSG 312 Query: 431 ASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISC--LHG 488 AS+ + + L++ + DDG+G G G G+TGMRER +GGT+ G Sbjct: 313 ASSARVGIEHRASWLVVEVTDDGAG-TVGPPAAGNGITGMRERAALVGGTVDAGPLREGG 371 Query: 489 TRVSVSLPQRYV 500 RV LP Sbjct: 372 FRVRARLPLDGA 383 >UniRef50_B9L1R7 Probable transmembrane two component system sensor kinase transcription regulator protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R7_THERP Length = 355 Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 128/316 (40%), Gaps = 6/316 (1%) Query: 187 VWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQ 246 + + V L L I ++ I ++ Sbjct: 31 LIVVTGAVAGTTLTLLSTGSTEHLFELVALFTIAGTFLSVLINWIVLRAAFRPIDVLEQT 90 Query: 247 TWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRR 306 + + L+ L + +L R + L++R+L +E R+ Sbjct: 91 ADEVRRGNFHVRAPSVPLSDPDLENLTATFNAMLDTLVGYQQRLRELSQRVLTAQEEERQ 150 Query: 307 DVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 +ARELHDD Q++TA+ ++ + ++ Q + L+ +++R + LR Sbjct: 151 RIARELHDDPAQSLTALLVLLKMLH--DRQQPTDGRTLQELIDLTTATLESIRAIAQELR 208 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P LDD L A+ L + G+ H+ R LS + L+R+ QE L N+ Sbjct: 209 PPVLDDFGLAAALEGLAAQYWQR-FGLPVHVYVRGQRQRLSPEIELALYRIAQEALTNVA 267 Query: 427 KHADASAVTLQGWQQDERLMLVIEDDGSGLPP-GSGQQGFGLTGMRERVTALGGTLHISC 485 KHADA+ T+ ++ + L IEDDG G P +G GL GMRER + GT + Sbjct: 268 KHADATYATIDLQFREGTVSLRIEDDGRGFEPREGLGRGLGLFGMRERAELVHGTFALES 327 Query: 486 LH--GTRVSVSLPQRY 499 GTR++V++P Sbjct: 328 EPGHGTRITVAVPLES 343 >UniRef50_B1ZPK4 Histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZPK4_OPITP Length = 377 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 23/264 (8%) Query: 255 LLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELA--------------RNQHLAERLLET 300 L L + L ++R + +++K + Q L ++L Sbjct: 108 LRLHAAALAEGNRQLNREVKRRKAGEAAVEKAKEHYRCLFLESEVMQKKLQRLTRQILSA 167 Query: 301 EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNAS-VKQSGQLIEQLSLGVYDAVR 359 +E RR+++RELH ++ QT+ I Q + + A+ +K L ++L +AV Sbjct: 168 QEDERREISRELHGEVVQTLVGINVQLATLGKAASLGIRGLKAKIDLTQRLVARSVNAVH 227 Query: 360 RLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQ 419 + LRP LDDL L A+ + M+ M + L AL R L+RV Q Sbjct: 228 QFARELRPAVLDDLGLIPALHASMKTMAARR-NLKVRLTASAAVEALDAPLRTVLYRVAQ 286 Query: 420 EGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPG-----SGQQGFGLTGMRERV 474 E L N+ +HA A V L + + L + DDG G + GL GMRERV Sbjct: 287 EALTNVTRHARARHVDLTIVEVAGGIRLDVHDDGKGFAVQKTLSSRANRRLGLLGMRERV 346 Query: 475 TALGGTLHISCLH--GTRVSVSLP 496 +GGTL I GT V +P Sbjct: 347 EMVGGTLTIESSPGRGTTVRAEVP 370 >UniRef50_UPI0001C314AD GAF sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AD Length = 386 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 6/210 (2%) Query: 291 QHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQL 350 + + E RR ARELHD+ Q + ++ R +++ + V+ + + + Sbjct: 171 RQRLRDTMAAAEQERRRWARELHDETLQGLGGLQVLLSSALRRSSEPSQVEGAVRAAVEE 230 Query: 351 SLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW---RIDESALS 407 + +R L+ LRP LD+L LE A+ SL + GIV E + L Sbjct: 231 IGTEIEKLRTLITELRPAALDELGLEPALESLAGRVAA-VEGIVVTSEVVLADGERRRLP 289 Query: 408 ENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGL 467 + ++R+ QE L N VKHA A V ++ ++D + L + DDG+G G+ + GFGL Sbjct: 290 PDLETAVYRLVQEALTNAVKHARAERVDVRVTERDGCVELTVRDDGAGFDVGAPRAGFGL 349 Query: 468 TGMRERVTALGGTLHISCLH--GTRVSVSL 495 GM ERV GGTL + GT + +L Sbjct: 350 LGMEERVALAGGTLAVQSRPGAGTTIRATL 379 >UniRef50_Q67S65 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67S65_SYMTH Length = 633 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 11/248 (4%) Query: 258 SLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEE----SVRRDVARELH 313 +L V + G ++ L L + R +E + E R +ARELH Sbjct: 380 TLGVLVVASRQPGRFDEQHLRLLTLLANQAGRLIESSELHAKAREVAVLEERNRLARELH 439 Query: 314 DDIGQTITAIRTQAG-IVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDD 372 D + Q + + V L + +++ +R L+ LRP L + Sbjct: 440 DSVTQVLFGLTLNLESAVGLLDRKPEKARTLLTRSREMAGEALAEMRSLIFELRPAALQE 499 Query: 373 LTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADAS 432 L A+ + + G+ +L DE LS + L+RV QE LNN+ KHA A Sbjct: 500 KGLAMALSNHINLFR-RRTGVEVNLTLSGDE-RLSPDVEFALYRVAQEALNNVAKHARAR 557 Query: 433 AVTLQGWQQDERLMLVIEDDGSGLPPGSGQQG--FGLTGMRERVTALGGTLHISCLH--G 488 V ++ + E +L + DDG G P + +G FG+ GMRERV+ L G+L + G Sbjct: 558 HVRVKLDLRPEEALLEVCDDGVGFDPTASARGASFGMIGMRERVSELKGSLEVISAPGQG 617 Query: 489 TRVSVSLP 496 T + +P Sbjct: 618 TCIRARIP 625 >UniRef50_UPI000169369A sensor histidine kinase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169369A Length = 224 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 9/215 (4%) Query: 289 RNQHLAERL-LETEESVRRDVARELHDDIGQTITAIRTQA-GIVQRLAADNASVKQSGQL 346 N LAE+ + R+ +ARELHD + Q + AI A ++ L D ++ L Sbjct: 4 HNAQLAEQARVSAIVEERQRLARELHDAVSQQLFAISMTATAALRTLDKDFDKAQRQIFL 63 Query: 347 IEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDES-A 405 IE++S +R LL LRP L+ L + L++E++ + + + +DE Sbjct: 64 IEEMSAVAQSEMRALLLHLRPVHLEGNPLAVGLHKLLQELKAK---VPIEIVEDLDEEIR 120 Query: 406 LSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGS-GQQG 464 L + LFR+ QE L+N ++H+ AS + ++ + + L L I D+G G + Q Sbjct: 121 LPKGIEDHLFRIVQEALSNSLRHSKASKLEVKLHHRGDGLRLSIRDNGIGFEIDNTKQAS 180 Query: 465 FGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 +GL MRERV +GG+L I GTR+ + +P Sbjct: 181 YGLHTMRERVNEIGGSLQIITAPGKGTRIEIRVPI 215 >UniRef50_A7NID8 Integral membrane sensor signal transduction histidine kinase n=2 Tax=Roseiflexus RepID=A7NID8_ROSCS Length = 445 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 82/382 (21%), Positives = 134/382 (35%), Gaps = 26/382 (6%) Query: 140 ALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWL 199 L+ AP+ A + L L I R + + +++ L Sbjct: 49 GALIAAVTAQPDAPLWKRGVVVGALSILLALNLIPPLSDIRPRSTPPIQTAIYLMLASAL 108 Query: 200 QLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLM-------NAIALIASQTWRDHP 252 S +++ + L W L L+ +IA + Sbjct: 109 YFVAFSLSSGAASTVISMLLFLLVGQATWTLPLATALIYAGGMMIGVCGMIAFFVGLEVA 168 Query: 253 VDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE-------TEE--- 302 + + + + QR + + + + AR + L +L E Sbjct: 169 LQSAATFSFGVVFVTMFVRLSQRYEQQTEQAEAQRARAEELLAQLQASHDELRAAREREL 228 Query: 303 -----SVRRDVARELHDDIGQTITAIRTQAGIVQRLA-ADNASVKQSGQLIEQLSLGVYD 356 R +AR++HD +G +T + Q RL D +++ D Sbjct: 229 KMAAIEERVRLARDIHDGLGHYLTILNVQLQAASRLLQRDPERAAAVIVTCREVAQTALD 288 Query: 357 AVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFR 416 VRR + ++P LD +L+ AI L+ + L I D AL + +TL+R Sbjct: 289 EVRRSVAAMQPSPLDGHSLDVAIERLIDDFRL-STAIDVRFVQAGDLPALPQTLAMTLYR 347 Query: 417 VCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTA 476 QEGL N KH +AS + + E L I D+G GFGLTG+RER+ Sbjct: 348 AVQEGLTNARKHGNASQIDVTLTFLPETARLTIRDNGQPNNGAHEGGGFGLTGLRERIER 407 Query: 477 LGGTLHIS--CLHGTRVSVSLP 496 LGG L G + + P Sbjct: 408 LGGVLRAGPLPEGGFLLDIIAP 429 >UniRef50_B8EMD2 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methylocella silvestris BL2 RepID=B8EMD2_METSB Length = 453 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 18/338 (5%) Query: 171 GPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELS------RFTPFCLALPIIALAW 224 LV+ R + + + + + L+ +E++ R T +A+ + Sbjct: 107 FYRLVTAAEPLRTQLDLPFAFHSIGGMTLEADPHNEVAEAWSDFRLTLIIMAVFFTLVLA 166 Query: 225 HYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQ 284 W + + + S + L + L L G I + L+ Sbjct: 167 LAFWTIRTALSPLRDVCDAFSGIGGGDYATRVAPLAYRELEPLRYGFNI-----MAARLE 221 Query: 285 KELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN--ASVKQ 342 +N+ L E+++ +E R ++AR+LHD++ + ++ A ++++ V Sbjct: 222 GMTTQNRALHEQIVNVQEEERAELARDLHDEVAPFLFSVGADAAMIRQFLQTGMGDQVGP 281 Query: 343 SGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRID 402 I + +R +L RL P L DL L AI +L+ + + ++ + Sbjct: 282 RADAISDAVRHMQRHLRDVLRRLAPGALLDLGLAGAIDNLIGFWKARRPELSFGVDVTEE 341 Query: 403 ESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQ 462 L + +FRV QE L+N ++H + + ++ ++R+ +V+EDDGSG G Sbjct: 342 RIGLPLDA--VVFRVVQESLSNAIRHGQPARIDVRIKILEQRIRIVVEDDGSGFSKDRGP 399 Query: 463 QGFGLTGMRERVTALGGTLHIS---CLHGTRVSVSLPQ 497 GFGL GM+ERV ++GG + I G V +P Sbjct: 400 NGFGLAGMQERVRSVGGVVTIRNRASRQGVIVEADIPI 437 >UniRef50_C1YH63 Signal transduction histidine kinase, COG4585 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YH63_NOCDA Length = 442 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 72/379 (18%), Positives = 140/379 (36%), Gaps = 18/379 (4%) Query: 136 ESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVI 195 + +++ + + W + + L ++ + R + +L+ V+ Sbjct: 52 VYFTSVMAAMAAIALVTSDPFWRWPLVGLMAAVTAVYYLFARRLVMREERIRPAVLMAVL 111 Query: 196 SLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDL 255 + + + P+ + + + ++ + D+ Sbjct: 112 LVLCLPAVTVNPALTFLVVAVAPLCFITSPVPAAVSTVGAILLVPMPLRGLLGLSEWDDI 171 Query: 256 LLSLLVQSLT---GLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEES-----VRRD 307 ++LL+ + L G + R+ E + + + ++ E R Sbjct: 172 AVNLLINGVMVGYTLWFGGWLGRIIEQSYERANLIRELRESRLEVVRLSEETGAMAERER 231 Query: 308 VARELHDDIGQTITAIRTQAGIVQ-RLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLR 366 +ARE+HD + Q T+I V+ + +D ++ L+ + + R ++ + Sbjct: 232 LAREVHDTLAQGFTSIVALTQAVESEMDSDPELARRHLALMRETAAENLAEARAMVAARQ 291 Query: 367 PRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIV 426 P LD TLE A+ + + E G+ E +ALS + ++ L R QE L N+ Sbjct: 292 PVGLDSQTLEAALDRIASRLGGEL-GVPVDTEVLGAPTALSNDLQICLLRTAQEALANVR 350 Query: 427 KHADASAVTLQGWQQ------DERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT 480 +HA A V + + L + DDG G PG G GL MR R GG Sbjct: 351 RHARAGHVRVALEYTRAPDGSPGPVELTVADDGVGFDPGRTAPGNGLANMRRRADDAGGA 410 Query: 481 LHISCLH--GTRVSVSLPQ 497 + + GTRV +SLP Sbjct: 411 VEVGSAPGRGTRVRMSLPL 429 >UniRef50_A1WJX0 Response regulator receiver sensor signal transduction histidine kinase n=10 Tax=Comamonadaceae RepID=A1WJX0_VEREI Length = 385 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 79/284 (27%), Positives = 123/284 (43%), Gaps = 15/284 (5%) Query: 218 PIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLR 277 P I L G A+ A + + P + ++ V A + Sbjct: 101 PFILLTGAIGEAAAVDAMRLGVADYLLKDAMPRLPQVIARAIEVHEARRARERAVAE--- 157 Query: 278 ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN 337 L R LAE L + E R +ARE+HDDIG +TA+R + R +D Sbjct: 158 -----LAISERRLAELAEHLQTSIEQERAAIAREIHDDIGGALTAVRVAVAWIGRHGSDP 212 Query: 338 ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL 397 A + + + ++ A +R++ LRP L+ L AI+ L E G+ + + Sbjct: 213 A-LLEHARSAAEMLQHAIGASQRIMMNLRPPILEQ-GLVAAIQWLAAGFE-RRTGVATRV 269 Query: 398 EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP 457 + S + R+ +R QE L N+ KHA A V ++ + L L + DDG G+ Sbjct: 270 RSSGEAIQTSPDIRLVAYRTAQEALTNVSKHAQAGRVEIELSDKKGMLTLEVADDGLGIA 329 Query: 458 PG--SGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQ 497 PG Q FGL G++ER +GG L IS G+ V++S+P Sbjct: 330 PGMLDKPQAFGLKGLQERARTVGGWLDISSRPGHGSCVTLSIPL 373 >UniRef50_C4DDE2 Signal transduction histidine kinase, COG4585 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDE2_9ACTO Length = 380 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 81/349 (23%), Positives = 134/349 (38%), Gaps = 22/349 (6%) Query: 164 NNTWLPLGPSL----VSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPI 219 WLP+ ++ ++ R + LF S+ + D + +AL Sbjct: 34 KEFWLPVAAAVPLAILTGLALLARRRYPIPVTLFTGSMTVLFIASDSRAGTVALLIALYS 93 Query: 220 IALAWHYGWQGALIATLMNAIALIASQTWRDHPVD------LLLSLLVQSLTGLLLGAGI 273 +A + W + +++ + + + + L++ L + G + G Sbjct: 94 LA-KYERRWIAIVAGSVVIVVGTVTAGLSGSWEMASRSAPWLVIFLEAGIIAGDIAGRQQ 152 Query: 274 QRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAG-IVQR 332 + L + + LA+R R +ARELHD + I+ + Q+ + Sbjct: 153 RALESARSRAAEAERSKEELAQRRAA---EERVRIARELHDSLTHAISVVNVQSSVALHM 209 Query: 333 LAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG 392 L + S + I S +R L LR + D ++ +L+ Sbjct: 210 LNRQPEQAEASLRNIRAASQDAMRELRATLRALRMTEGDSTPGIDSLPALVE-----RSA 264 Query: 393 IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDD 452 + ++ D AL E T++R+ QE L N +HA ASAV + DE + I DD Sbjct: 265 LTIAMDISPDRQALPETVDRTVYRIVQEALTNSTRHARASAVDISIVVDDESVTTTITDD 324 Query: 453 GSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLH--GTRVSVSLPQRY 499 G G P +G GL GMRERV ALGG L G +V LP Sbjct: 325 GIGPAPEGVAEGLGLMGMRERVAALGGDLRPGPGPDGGFQVRAVLPLTE 373 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.152 0.447 Lambda K H 0.267 0.0468 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,959,302,393 Number of Sequences: 3077464 Number of extensions: 147660265 Number of successful extensions: 1331830 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5704 Number of HSP's successfully gapped in prelim test: 28453 Number of HSP's that attempted gapping in prelim test: 1238524 Number of HSP's gapped (non-prelim): 70103 length of query: 500 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 367 effective length of database: 631,093,644 effective search space: 231611367348 effective search space used: 231611367348 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.9 bits) S2: 96 (41.4 bits)