 |
| Job Description | P05523 | | Confidence | 41.42% | Date | Wed Jan 25 15:20:11 GMT 2012 |
| Rank | 77 | Aligned Residues | 26 |
| % Identity | 23% | Template | c2ba1B_ |
| PDB info |
PDB header:rna binding protein | Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; |
PDBTitle: archaeal exosome core
|
| Resolution | 2.70 Å |
|
|   |   |
236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | Y | G | R | K | G | E | P | C | R | V | C | G | T | P | I | V | A | T | K | H | A | Q | R | A | T | F | Y | C | R | Q | C | Q | K |
| Query Conservation |   |
|
|   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
|
|
|
| Alig confidence |   |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   | . | . | . | . |
|   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |
| Template Sequence |   |
L | R | A | L | . |
. |
. |
. |
C | S | N | C | K | T | E | M | V | R | . |
. |
. |
. |
E | G | D | I | L | K | C | P | E | C | G | R |
| Template Known Secondary structure |   |
S | B |
| B | . | . | . | . |
| S | S | S |
|
| B |
|  |  | . | . | . | . |  | T | T |  |  |  |
| S | S | S |
|
|
| Template Predicted Secondary structure |   |
 |  |  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  | . | . | . | . |
|
|
|  |  |  |
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
139 | 140 | . | . | |
|
|
|
. | . | . | . | . | . | . | 150 | . | . | |
|
|
|
. | . | . | . | . | . | . | 160 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|