 |
| Job Description | P05523 | | Confidence | 30.86% | Date | Wed Jan 25 15:20:11 GMT 2012 |
| Rank | 103 | Aligned Residues | 26 |
| % Identity | 19% | Template | c3eh2B_ |
| PDB info |
PDB header:protein transport | Chain: B: PDB Molecule:protein transport protein sec24c; |
PDBTitle: crystal structure of the human copii-coat protein sec24c
|
| Resolution | 2.35 Å |
|
|   |   |
244 | . | . | . | . | . | 250 | . | . | |
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  | . | . |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | R | V | C | G | T | P | I | V | . |
. |
A | T | K | H | A | Q | R | A | T | F | Y | C | R | Q | C | Q | K |
| Query Conservation |   |
|
|   |
|
|   |   |
|   | . | . |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
| Template Sequence |   |
C | N | R | C | K | A | Y | M | C | P | F | M | Q | F | I | E | G | G | R | R | F | Q | C | C | F | C | S | C |
| Template Known Secondary structure |   |
| T | T | T |
|
| B |
|
| T | T |
|  |  |  | G | G | G | T |  |  |  |
| T | T | T |
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|