225 c1ltxR_ Probab=98.66   E-value=6.6e-07  Score=68.75  Aligned_columns=108  Identities=22%

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHH-----------------------------
Q ss_conf             886299987979999999999975886783799981787788776441000-----------------------------
Q batch____         2 SKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSY-----------------------------   52 (847)
Q Consensus         2 ~K~kVVIIGaG~AGls~A~~L~~~~~~~~~~VtVie~e~~~~y~~~~l~~~-----------------------------   52 (847)
                      +..+|||||||+||+++|..|++.|    ++|+|+|+++++|+.....+.-                             
T Consensus         6 ~~~DVvVIGaG~aGL~aA~~La~~G----~~V~vlEa~~~~GG~~~s~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~   81 (494)
T c1ltxR_           6 SDFDVIVIGTGLPESIIAAACSRSG----QRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENTENSMWQEQILENEEAI   81 (494)
T ss_dssp             SBCSEEEECCSHHHHHHHHHHHHTT----CCEEEECSSSSSCGGGCEECHHHHHHHHHTTTCCCCCCCGGGGSCTTEEEE
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCC----CEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             4378899989888999999999879----809999678899712799852770432146322565421222223442001


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____        53 --------------------------------------------------------------------------------   52 (847)
Q Consensus        53 --------------------------------------------------------------------------------   52 (847)
                                                                                                      
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (494)
T c1ltxR_          82 PLSSKDKTIQHVEVFCYASQDKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGT  161 (494)
T ss_dssp             EBCSSCCCEEEEEEEECSTTCCCCCCHHHHHHTGGGCCEESSCCCEETTSHHHHHHHHHTGGGGCCEEEEEEEEEEETTE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
T ss_conf             13322333332331111465554312223211010023331213444014888976442856556556444210200140


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____        53 --------------------------------------------------------------------------------   52 (847)
Q Consensus        53 --------------------------------------------------------------------------------   52 (847)
                                                                                                      
T Consensus       162 ~~~~p~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (494)
T c1ltxR_         162 VEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSTSCTV  241 (494)
T ss_dssp             EEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHTTGGGCGGGTGGGTTSBHHHHHHHSSCCHHHHHHHHTTTSCCCCCBHH
T ss_pred             HHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
T ss_conf             21145896787216564303444345677775235667588643215968899988389999999999999751478824


Q ss_pred             ----------------------CCCCCHHHHHHCHHHHHHHCCCEEEECCEEEEE-----ECCCCEEEECCCCEEECCEE
Q ss_conf             ----------------------165789998425899999779879928889998-----37985899889978986899
Q batch____        53 ----------------------FSHHTAEELSLVREGFYEKHGIKVLVGERAITI-----NRQEKVIHSSAGRTVFYDKL  105 (847)
Q Consensus        53 ----------------------~~~~~~~~l~~~~~~~~~~~gI~~~~g~~V~~I-----d~~~k~V~~~~G~~i~yD~L  105 (847)
                                            ........+.......+.+.|.++++++.|..|     +..-..|++.+|+++.+|++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~Gg~i~l~~~V~~I~~~~~~~~~~~v~~~~g~~~~a~~V  321 (494)
T c1ltxR_         242 DGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHF  321 (494)
T ss_dssp             HHHHHHHHHHTTTTSSSSSSEEEETTCTTHHHHHHHHHHHHTTCEEETTCCEEEEEEETTTCCEEEEEETTCCEEECSEE
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEEEEEECCCCEEEECEE
T ss_conf             79999999999965306685588648878999999999740487088304226999838897699999379839990789


Q ss_pred             EEECCCCC
Q ss_conf             98058562
Q batch____       106 IMATGSYP  113 (847)
Q Consensus       106 VIATGs~p  113 (847)
                      |+++...+
T Consensus       322 I~a~~~~~  329 (494)
T c1ltxR_         322 IIEDSYLS  329 (494)
T ss_dssp             EEEGGGBC
T ss_pred             EECCCCCC
T ss_conf             98684036