11/01/2012 03:10:19 : INFO  : Run start: Wed Jan 11 03:10:18 GMT 2012
11/01/2012 03:10:21 : INFO  : Initialised job
11/01/2012 03:10:22 : INFO  : Renaming log file 'phyre2_20120111_031018.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/27e34be6dea04f27/phyre_20120111_031018.log'
11/01/2012 03:10:23 : INFO  : Initialised job:
Sequence
>batch____
MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGR
KTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQD
ALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQV
RRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD

11/01/2012 03:10:23 : INFO  : Checked sequence
11/01/2012 03:10:24 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 03:10:25 : INFO  : PSI-BLAST 3 iterations
11/01/2012 03:12:02 : INFO  : PSI-BLAST 5 iterations
11/01/2012 03:13:54 : INFO  : Finished PSI-BLAST
11/01/2012 03:13:55 : INFO  : Running Buildali to generate a3m file
11/01/2012 03:19:56 : INFO  : Converting to HMM
11/01/2012 03:19:59 : INFO  : Calibrating HMM
11/01/2012 03:20:08 : INFO  : Searching HMM database
11/01/2012 03:25:35 : INFO  : Finished buildali
11/01/2012 03:25:36 : INFO  : Predicting secondary structure
11/01/2012 03:25:38 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 03:25:39 : INFO  : Predicting Disordered regions
11/01/2012 03:25:40 : INFO  : Predicted Disorder (Disopred)
11/01/2012 03:25:44 : INFO  : Running memsat_svm check
11/01/2012 03:29:42 : INFO  : Globular protein
11/01/2012 03:29:43 : INFO  : Predicted Transmembrane (memsat_svm) ID '27e34be6dea04f27'
11/01/2012 03:29:43 : INFO  : Initialising fold library search
11/01/2012 03:29:44 : INFO  : Initialised search input
11/01/2012 03:29:45 : INFO  : Building Ensemble models
11/01/2012 03:29:46 : INFO  : Building hh.c2omlA_.model.1.pdb
11/01/2012 03:29:54 : INFO  : Building hh.c2olwB_.model.2.pdb
11/01/2012 03:29:59 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/27e34be6dea04f27/hh.c2olwB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/27e34be6dea04f27/c2olwB_.2.pdb
11/01/2012 03:30:03 : INFO  : Building c2omlA_.1.pdb
11/01/2012 03:30:08 : INFO  : Building c2olwB_.2.pdb
11/01/2012 03:30:15 : INFO  : Building c3dh3C_.3.pdb
11/01/2012 03:30:21 : INFO  : Building c1vioA_.4.pdb
11/01/2012 03:30:27 : INFO  : Building c1kskA_.5.pdb
11/01/2012 03:30:33 : INFO  : Building c2gmlA_.6.pdb
11/01/2012 03:30:39 : INFO  : Building d1vioa1.7.pdb
11/01/2012 03:30:44 : INFO  : Building d1kska4.8.pdb
11/01/2012 03:30:49 : INFO  : Building d1v9ka_.9.pdb
11/01/2012 03:30:55 : INFO  : Building c1v9fA_.10.pdb
11/01/2012 03:31:02 : INFO  : Building d1v9fa_.11.pdb
11/01/2012 03:31:09 : INFO  : Building c1qyuA_.12.pdb
11/01/2012 03:31:14 : INFO  : Building c2i82D_.13.pdb
11/01/2012 03:31:22 : INFO  : Building d2apoa2.14.pdb
11/01/2012 03:31:28 : INFO  : Building d2ey4a2.15.pdb
11/01/2012 03:31:34 : INFO  : Building c2ey4A_.16.pdb
11/01/2012 03:31:39 : INFO  : Building d1r3ea2.17.pdb
11/01/2012 03:31:45 : INFO  : Building c2apoA_.18.pdb
11/01/2012 03:31:51 : INFO  : Building c3uaiA_.19.pdb
11/01/2012 03:31:59 : INFO  : Building d1sgva2.20.pdb
11/01/2012 03:32:26 : INFO  : Finished HH model building
11/01/2012 03:32:28 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 03:33:16 : INFO  : html domain output complete ID '27e34be6dea04f27'
11/01/2012 04:11:14 : INFO  : Run end  : Wed Jan 11 04:11:13 GMT 2012
