Phyre 2 alignment of P75966 with c2fo1A_

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Job Description | P75966
Confidence | 19.16% | Date | Thu Jan 5 12:16:33 GMT 2012
Rank | 26 | Aligned Residues | 44
% Identity | 16% | Template | c2fo1A_
PDB info | PDB header:gene regulation/signalling protein/dna | Chain: A: PDB Molecule:lin-12 and glp-1 phenotype protein 1, isoform b; | PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna
Resolution | 3.12 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | M | R | Q | F | I | I | S | E | N | T | M | Q | K | T | S | F | R | N | H | Q | V | K | R | F | S | S | Q | R | S | T | R | R | K | P | E | N | Q | P | T | R | V | I | L | F | N | K | P | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | K | T | L | Y | I | S | D | . | S | D | K | R | K | Y | F | D | L | N | . | A | Q | F | F | Y | G | . | . | C | G | M | E | I | G | G | F | V | S | Q | R | I | K | V | I | S | K | P | S
Template Known Secondary structure |  |  | T | T |  |  |  | B | T | . | T |  |  |  | S |  |  |  |  |  | . |  |  |  |  |  | T | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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