>ss_pred
CCEEEEECCEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHCCCCCEEECCCCCCCCEEEEEEEECHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCEECCEECCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEEEEECCEECCCCCCCCEEECCC
>ss_conf
9357640221114522343034503301142114667878999988997696478875553053303656568833358788029999809999888867002755799999857889899889850815086661702999963767752045678862268724999998318828999999985986877899887134527888786363469
>batch____
MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD
>UniRef50_Q9CKK7(9-227:241) Ribosomal large subunit pseudouridine synthase E n=61 Tax=Bacteria RepID=RLUE_PASMU  E=2e-67 s/c=1.17 id=61% cov=95%
-----------QKTKPRPSSLRSVNKRKAAEIKPQKRPlsfrqkktvnfaeTQVILFNKPYDVLTQFSDEEGRATLKAFIPIPHVYPAGRLDRDSEGLVLLTNNGEIQHRLAVPKFNTEKTYFAQVEGIPQETDLAQLRQGVVLNDGKTLPAKVRLVPEPNWLWQRNPPIRERKQIPTSWLEIKIHEGRNRQVRRMTAHIGFPTLRLIRYQMALFNLANLEQGQYRQLSE
>UniRef50_Q9HX48(3-184:189) Ribosomal large subunit pseudouridine synthase E n=30 Tax=Proteobacteria RepID=RLUE_PSEAE  E=2e-61 s/c=1.30 id=66% cov=83%
---------------------------------PPSEP-KLLLFNKPFDVLTQFNDEQGRSTLKDFIPVPGVYPAGRLDRDSEGLLLLTNDGRLQARIADPRHKLPKTYWVQVEGTPDEEQLRRLREGVTLNDGPTLPAEARLLDEPT-LWERVPPVRFRKSVPTHWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWSLDGLGLGEWREV--
>UniRef50_D0IWI1(17-217:223) Pseudouridine synthase n=2 Tax=Comamonas testosteroni RepID=D0IWI1_COMTE  E=8e-55 s/c=1.07 id=58% cov=89%
-----------------------FSSNRSSNlrrstvvRQPAPRPgvTRLLCFHKPYGVLSQFTPEGKWQGLKDWIDVPGVYVAGRLDADSEGLLLLTNDGQLQARIADPRHKMEKTYWVQVEGIPDEAALQRLREGVELSDGKTLPAKARLIEPQPLMWPRNPPIRVRQNIPDCWIELIIREGRNRQVRRMTAAVGHPTLRLVRMAVGPYSIEGLEPGQWLDV--
>UniRef50_Q5ZXB8(25-199:222) Pseudouridine synthase n=2 Tax=Legionella pneumophila RepID=Q5ZXB8_LEGPH  E=7e-53 s/c=1.19 id=57% cov=81%
---------------------------------------QLILFNKPYGILTQFTGELPEQTLSAFIKLPGFYAAGRLDKQSEGLLILTDDGKLQHRLTHPKFEKKKHYWVQVEGVPTDKDLQPLRKGLVIKDITFLPAEARLISEPK-IWPRIPPIRERKHIPTTWLEIILREGKNHQIRKMTAAIGFPTLRLIRYQIGDWHLDQLQPGEYKLI--
>UniRef50_Q6F9V5(33-229:239) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V5_ACIAD   E=4e-14 s/c=0.41 id=31% cov=90%
-----IQDEIQKDLKYRIHDLTDFNFQVFDQNYVYREKVYIIL-NKPkgFECSHQpHHHQSVFSLLPDLLIQRNIAAVGRLDQDTTGLLLLTDDGQYLHTLTHPKKHVPKVYHV------------ATIDPITVDQMHQLEQGVELHNEKGVFAATNVTL-----LNETQLSMTIHQGVYHQVKRMIAAVGNKVTALHRHKIGQLELPNLAEGEWMYLTE
>UniRef50_B0SGV7(29-238:247) Pseudouridylate synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SGV7_LEPBA  E=2e-12 s/c=0.36 id=34% cov=85%
-----------------------FDGKPVTKEEGSDSRPKIIAFNKPPGFLTSHEDKHHENTIFTLLPesFQKYNYAGRLDLDSRGLILLSIDGNFIQKVTHPKNKIDKEYIISLKQpVSWKKIAEEFMLGVR-EGGETLRA---LAVKPANVFPEKTP-------PgfTSYLSIVLKEGKKRQIRRMCKTKDLVVLDLYRIRIGKLDLRNfdLLEGKYKVVTE
>UniRef50_O96270(110-316:338) Pseudouridine synthase, putative n=2 Tax=Plasmodium RepID=O96270_PLAF7  E=7e-12 s/c=0.35 id=32% cov=82%
-------------------------------KQNENKLHKWIVLHKPKGLLCTSNDEKNRKSIYTLFPEEMlqkyrLVTVGRLDRNTSGVLLLTNDYAWVNKLTHPKYQRIRTYRVHIEGPVKMNALKELARGIYLeEDEKTQPKKIYNYKEsreksniddkkkkkmskmkkktnPAFIeILREEKIKIKEDTkKITVLNISIKEGRNRQIRKMFQQINQPVIKIKRTSFENITLKNI----------
>UniRef50_B1KQS3(44-229:239) Pseudouridine synthase n=20 Tax=Gammaproteobacteria RepID=B1KQS3_SHEWM  E=6e-08 s/c=0.32 id=31% cov=84%
-----------------NNHIRLEGGQRLTAR-----ASRYIMLHKPADTLSSNVD-GDHPSVFNFINLEHtseLHIAGRLDADTTGLLLITDDGRWSFNVFNPKYHCEKVYRVYL-----RDSIEGEIAGeIDAELKARFKQGLDLQGEQALTLPAKLEFVSPKEVL-----LTITEGRYHQMKRMFARVGNRVNALHREQVGKIKLD-MPVGQWRYLT-
>UniRef50_Q3AI58(19-203:230) Pseudouridine synthase n=5 Tax=Cyanobacteria RepID=Q3AI58_SYNSC   E=9e-61 s/c=1.27 id=53% cov=81%
-----------------------------------------LLLNKPYGVLSQFTSEEGsrWRCLSDFVDVPQVYAAGRLDADSEGLLILTSNGRLQQRLTDPRFGHWRSYWAQVEGTPNTEQLQQLCDGVVVQGRRTLPAKARWLQGQdlPQLPERTPQIRFRAAIPTNWLQLSLSEGRNRQVRRMTAAVGLPTLRLVRCCIDlmdngpPLDLTGLQPGSWRTVT-
>UniRef50_A3YG85(2-176:242) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=A3YG85_9GAMM  E=1e-58 s/c=1.30 id=57% cov=80%
----------------------------------------IIVFNKPFQVLSQFTTDEEKATLSSFIDKANFYPAGRLDYDSEGLLLLTDHGALQHLIASPQHKMPKTYLVQVEGELTKEAVEQLRVGVELKDGLTKPAEAKIASD-FEPWPRHPPIRERKNIPTSWLELTITEGKNRQVRRMTAAVGFPTLRLIRTQIGPYSLTDIELGHWLE---
>UniRef50_Q6F9V5(33-229:239) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V5_ACIAD   E=4e-51 s/c=1.03 id=34% cov=74%
----------------------------------------YIILNKPKGFECSHQPHHHQsvfSLLPDLLIQRNIAAVGRLDQDTTGLLLLTDDGQYLHTLTHPKKHVPKVYHVATIDPITVDQMHQLEQGV------------ELHNEKGVFAATNVTL-----LNETQLSMTIHQGVYHQVKRMIAAVGNKVTALHRHKIGQLELPNLAEGEWMYLTE
>UniRef50_A4J3M3(57-228:309) Pseudouridine synthase n=167 Tax=Bacteria RepID=A4J3M3_DESRM   E=5e-49 s/c=1.14 id=44% cov=75%
----------------------------------------YLLMNKPRGYVTTLSDERDRKTVVDLLKgvEQRVYPVGRLDYDSEGLLLLTNDGELTQALTHPKHKVKKTYLAKVDGIPETEELKAMAKGLVLEDGPTAPADVRL---------------AGTGDNRALLEISIHEGRNRQVRRMCEHIGYKVLRLRRTRIGTLELGSLKSGEVRALTK
>UniRef50_B3U4L2(25-228:420) Pseudouridine synthase n=3 Tax=Bacteria RepID=B3U4L2_9BACT   E=2e-47 s/c=0.93 id=40% cov=78%
----------------------------------AAQPYVYLILNKPKNVMSTLDDPEGRPTVKDLLhgVTVRVFPVGRLDFDSEGLMLLTNHGDLAQALLHPRYHVPKTYLIKVKGVLDDAKIEALERGVKLEDGFTAPAKVKKVSRAES---------------NSWLEVTIHEGRKHQVKRMVEAVGHSVIKLVRVRMGPLLLGDLAPREYRFLTD
>UniRef50_P35159(41-226:244) Ribosomal large subunit pseudouridine synthase B n=200 Tax=Bacteria RepID=RLUB_BACSU  E=9e-47 s/c=1.01 id=39% cov=76%
----------------------------------------YFLLYKPRGVISAAQDDKGRKVVTDFFKniPQRIYPIGRLDYDTSGLLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLERGIRLEEGKTAPAKAKLLS-------------LDKKKQTSIIQLTIHEGRNRQVRRMFEAIGHEVIKLKREEYAFLNLRGLHTGDARELT-
>UniRef50_B8G2X0(38-228:567) Pseudouridine synthase n=3 Tax=Bacteria RepID=B8G2X0_CHLAD   E=4e-45 s/c=0.96 id=38% cov=79%
--------------------------------QPLRMPAKrtYIMLHKPAGVVSTAEDPHGRPTVVDLVDVPaRVFPVGRLDLDSEGLILLTDDGELAYALTHPSFEVEKEYRVLLDRALTPDALRSWRNGVLLEGEMTAPAWVELLETTPE---------------GVWVRIVLREGRKRQIRAVAKLLGYEVRRLVRVREGPLQLGDLPPRAWRHLTD
>UniRef50_Q9I5J6(39-223:230) Ribosomal small subunit pseudouridine synthase A n=25 Tax=Gammaproteobacteria RepID=RSUA_PSEAE  E=7e-45 s/c=0.98 id=37% cov=83%
------------------HEVRVFSRVELDERlLQAGKPARYYMLHKPMGCVSATRDPQ-HPTVLDLFPEdlrDDLHIGGRLDYNTTGLMLLTNDGQWSRRLTLPGSRRDKVYYVETEAPIDQRYVDAFAAGLHFR-------FEDLVTLPAQLEPIGP----------RCARLTLHEGRYHQVKRMFGHFDNKVLRLHRERMGDICLDpQLPPGAWRPL--
>UniRef50_A6DF49(28-225:236) Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DF49_9BACT  E=2e-44 s/c=0.91 id=35% cov=87%
--------------TINNHRVTELSTQVDvdndevrYRRKPLVLEKKlYYLLNKPVGYVCTNDDPFAEKKAIDLLPDKGrLYTVGRLDKPSEGLIVLTNDGDLAKIMTHPSFELEKKYRVTVKGRVSQKKLDYLvRDGLTFEGVNYRVLDARI----------------KKQVPGGYmINFTLNEGKNREIRKICQSLDLQVKRLRRYEIAGIALGKLPPGAWRPMTQ
>UniRef50_D1AL84(27-222:233) Pseudouridine synthase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AL84_SEBTE  E=8e-44 s/c=0.91 id=41% cov=72%
----------------------------------------YIMLNKPQDVISA-TDDERHRTVLDLLEEPltkvGLFPVGRLDKDTEGLLVLTNDGKMAHELLSPKKHVPKRYYVELKKTLSKEEAAILENGVELETFTTKPAKVEFITEDK-------------------VYIIISEGKYHQVKRMFKCVGNRVLFLKRTGMGNLGLDeNLAPGEYRELT-
>UniRef50_A5KLG0(64-254:261) Pseudouridine synthase n=8 Tax=Bacteria RepID=A5KLG0_9FIRM   E=2e-43 s/c=0.93 id=37% cov=81%
----------------------------------------YFMLNKPAGVVSATEDKK-ERTVIDLIKEskrKDLFPAGRLDKDTEGLLLITNDGQLAHRLLSPKKHVDKIYYAKIKGIVTEEDVRLFEKGVHIGDeKPTMPAALEILSVQK--ERRKEKIKEQKILPETKNEtdekedgyseiyLTIKEGRFHQVKRMFRAVGKEVVYLKRIQFGTLTLDpSLKPGQYRKLTE
>UniRef50_C7GZ55(41-241:250) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ55_9FIRM  E=1e-42 s/c=0.87 id=30% cov=79%
----------------------------------------YIAMNKPCGYVCTVSDELGRRTVYDLLtdIDERLFTIGRLDKDSEGLILLTNDGDLAQKLLSPKRKIEKNYEVVVRGVPGANDIKKLSGGITIDVEISQtkqnkpvKSIVKYHTKPAKIFEIGQKQGDMK------LSMIIKEGKKRQIRKMFDVIGHEVIKLKRVKFAGIELGDLRPGEFRHLSE
>UniRef50_A5TW76(18-221:226) Pseudouridine synthase n=11 Tax=Fusobacterium RepID=A5TW76_FUSNP   E=2e-42 s/c=0.85 id=32% cov=72%
---------------------------------------RYYIMNKKAGYITATEDFK-ENTVMDLLPEwvirKDLAPVGRLDKDTEGLLLFTNDGKLNHRLLSPKNHIDKVYYIEIENNILDKDILKLEQGVDIGNYITQPAKVEKISD-------------------NKIYLTIKEGKFHQVKKMLEAVNNKVCYLKRVSFGKLKLDDLALGEVKEV--
>UniRef50_C3JBA6(261-447:459) Pseudouridine synthase n=2 Tax=Bacteria RepID=C3JBA6_9PORP   E=2e-42 s/c=0.93 id=32% cov=75%
----------------------------------------YVLLNKPRNCVTTSSDPEKRLTAIDLVRnacNERIYPVGRLDRNTTGLLLLTNDGDLAAKLMHPKYEKKKIYQVTLDKPVSVEHMQQIASGIELEDGEIHADAISYVDENNL----------------AIVGIEIHSGRNRIVRRIFKHLGYRVYKLDRVYFAGLTKKDLPRGRWRYLTE
>UniRef50_B0S1L0(38-223:242) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S1L0_FINM2   E=6e-42 s/c=0.92 id=35% cov=73%
----------------------------------------YIAINKPIGYASTVKDKFADKKVVDLIKSDtRVYPVGRLDKDSHGLLILTNDGEFTYELTHPKFEHKKIYEVLVKGKPNKTEIKQLKDGILLDGYKLKKSKIEFIENVKN---------------DTKYRVTIFEGRNRQIRRMFDFINHPVLDLKRVQIGNYKMENsLKSGEYK----
>UniRef50_A3QB38(1-178:182) Pseudouridine synthase n=4 Tax=Bacteria RepID=A3QB38_SHELP   E=8e-42 s/c=0.97 id=44% cov=78%
---------------------------------------------KPYGYLSQFVGErrKRKPLLGELANFPtGIMAIGRLDHDSEGLLLLTTDGKTSHAV--RSKSIEKEYYLQLDGEITEQAISSLCEGVEIgikgEKYRTLPCRARRLDQAPDLPPRGRKIRDARHGPTSWLAITITEGKNRQLRKMTAAVGFATLRLVRVRIGDIRLGTLQPGEVKSL--
>UniRef50_Q1D5Q2(26-227:745) Pseudouridine synthase n=6 Tax=Bacteria RepID=Q1D5Q2_MYXXD   E=9e-42 s/c=0.85 id=33% cov=76%
-----------------------------------PDESSYFLLYKPVGVVTTLSDPQGRPTVANYVEEtgKRLFPVGRLDYDAEGALLFTDDGALAHKLTHPSFQVPRTYLAKVKGAPDTATLDKLRGGVRLEDGMATPVSVSV---------------FEAAERNTWLKIVVAEGRPHLIKRLCAAVGHPVVRLFRPSYAGVGVEGLRPGELRPL--
>UniRef50_A2RP35(112-319:328) Pseudouridine synthase n=172 Tax=Firmicutes RepID=A2RP35_LACLM   E=2e-41 s/c=0.82 id=34% cov=78%
----------------------------------------YYLLNKPQGVVSATKDNvfkTVVQLLSEKDFRKDIFPVGRLDKNTEGLLILTNDGALGHDLTQPKKHVEKEYFARIDGKVTDEIINKFAEGLTLKNGEKA--------RPGELFVEKTYKGDSQSGWVSEIRVIIHEGKFHQVKRMFEAVEMYVLYLKRIRMGNLALDsDLALGAYRPLT-
>UniRef50_Q15Q67(41-235:241) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q15Q67_PSEA6   E=2e-41 s/c=0.87 id=35% cov=71%
------------------------------------------MLNKPLGYVCSHDNNEGMR-IYDLLPErwefrnPKIVSVGRLDKDTSGLILVTDDTKLVHQLTSPKHHVDKVYQVSVDCPLQSDIIDSFAKGVVLGEGAeqCLPAKIEIVSE-------------------NVANVTLNEGKYHQVRRMFAACGYHVEALHRSQFGQYRLQDLAQGEWQTV--
>UniRef50_B9MRL6(22-222:233) Pseudouridine synthase n=2 Tax=Clostridia RepID=B9MRL6_ANATD   E=4e-41 s/c=0.85 id=34% cov=71%
----------------------------------------YIMMNKPKGYVCSNEELAsltVFSLISDDLKYRDLHTVGRLDKDAEGLLIITDDGEYTHRVISPKKRIEKEYLVRLEKEVDEEKLNEFENGIILDDGyKTLPAKYTIID-------------------STTVKLCIYEGKYHQVKRMFEAIGNKVVDLKRLRIGGLNLDQsLKPGEYR----
>UniRef50_B7A9J5(50-230:245) Pseudouridine synthase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9J5_THEAQ  E=5e-41 s/c=0.93 id=34% cov=75%
------------------------------------RRHLHLLLHKPAGYVTSRKEGPSVYALLEGFPTRDLSPVGRLDKDTEGLLLFTTDGELLHRLTHPRHKVEKRYLVHLLHPATAADVRAFQEGILLSGEKTLPARLHLGEDP------------------TWVELTLLEGRFHQVKRMFQARGNQVLYLKRLALGPLTLEDLPLGAARPLT-
>UniRef50_A0M7H0(100-286:295) Ribosomal large subunit pseudouridine synthase F n=4 Tax=Flavobacteriales RepID=A0M7H0_GRAFK  E=6e-41 s/c=0.90 id=27% cov=85%
------------------YRVKLEDDVRFDGRRLNPEKPEYILLNKPAGFFVTGNPEKGGKTVMELVArttSAKVSPVGKLDNQAKGLLLFTNDGTLAKKLAKPKNGIRQIYQVTLNKNLTKEDLEGIEKGVYIEGSKVLITSISFIEDK----------------PHNEVGIELYSIKEHIVTRIFKSLGYEVESLDRVVFGGLTKKDLPRGRHRNLTK
>UniRef50_D2B9T7(409-608:621) Pseudouridine synthase n=18 Tax=Actinobacteria (class) RepID=D2B9T7_STRRD  E=1e-40 s/c=0.84 id=34% cov=84%
--------------------VRRFGARVDPakqvihvdgKRLPTMPDLVYLAINKPIGVVSTMSDPDGRPSLADFVAdrTERLFHVGRLDTETEGLILLTNDGELANRLTHPSYGVQKKYWAKVPGRIERDLGRRLKKGIELEDGIAKADSFTLVQEHGQ---------------QALVEVVLHEGRKHIVRRMLEEVGHPVIDLARIEFGPVKLGRLKPGTVRALT-
>UniRef50_Q3B289(69-236:250) Pseudouridine synthase n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B289_PELLD  E=1e-40 s/c=1.00 id=37% cov=76%
--------------------------------QPEGR-KIYILFNKPRNVITTSSDERNREMVLDFIDVnERVYPVGRLDRKTTGVLLLTNDGMLANKLMHPSSNVKKEYIAVLDAPFPQASLPLLTGGMRLSDtgEKVSPCQAKIMGDGSQVW------------------ISIHEGKNHQVRRMFKTLGFEVTRLDRPTYAGLTVGDLRRGQWRHLT-
>UniRef50_C6J9Y4(41-231:323) Pseudouridine synthase n=2 Tax=Clostridiales RepID=C6J9Y4_9FIRM   E=1e-39 s/c=0.86 id=32% cov=76%
----------------------------------KNEKKVLLLFNKPRGIVCSTKQQFDETTVTDYLDYPlRVYPVGRLDKESQGLLLLTNEGDLVNKIMRAGNYHEKEYFVTVNKPVDREFVRRMSKGVPVLDTVTRPCRVVQTGE-------------------CSFRIILTQGLNRQIRRMCRYLGYEVQKLKRIRIMNLTLDGIREGEYREIT-
>UniRef50_B8KTF1(142-310:311) Pseudouridine synthase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KTF1_9GAMM  E=4e-39 s/c=0.96 id=34% cov=75%
---------------------------------PTNTPH-YIMLNKPSGVVCATRDAR-HRTVIDILDLPfqhTLHIVGRLDIQSTGLVLLTNDGQWSRRLSLPQSKFAKHYRVTTEQAITSEQIAGFEAGIFFayEGLTTRPARLHLIN-------------------SHEANVTLTEGRYHQIRRMFGRYGNRVLSIHRYATGPYVLSNLRPGQYREIS-
>UniRef50_A8G0B7(88-248:261) Pseudouridine synthase n=19 Tax=Shewanella RepID=A8G0B7_SHESH   E=1e-38 s/c=1.01 id=33% cov=75%
------------------------------------EPKQYRMLNKCVGTDCRLLPDDSDSLLHLLPASPRLYPVGRLDKDSRGLLLLTNDGELTQHLMHPDFGHTKTYRVRVDRPYGDEFLQKMAQGVSYRDVTTLPCTMTRLSEDQF-------------------EIVLTQGLNRQIRRMSQALGFKVIDLKRVKIQTLMLEDLNEGEMRELT-
>UniRef50_C7NBL1(38-244:252) Pseudouridine synthase n=3 Tax=Leptotrichia RepID=C7NBL1_LEPBD   E=2e-38 s/c=0.78 id=33% cov=83%
------------------------------------KPFVYIMMNKPAGVISATED-SHHKTVIDLLNDEyrtyDIFPVGRLDIDTEGLILLTNDGILSHNLLSPKKHVDKKYYVKITKSLSEDDIKTLENGIKLeENFITKNAKVEIICNNSEKESEDFDFGENENNKNENsVYITISEGKFHQVKRMFKAVGNEVLYLKRVKMGnLLLDENLELGGYRELTQ
>UniRef50_B1M661(126-308:601) Pseudouridine synthase n=2 Tax=Alphaproteobacteria RepID=B1M661_METRJ  E=2e-38 s/c=0.87 id=36% cov=77%
---------------------------------PSRERSRLWIFHKPRGVVTTARDPEGRQTVFDVLPEdlPRVVAVGRLDINTEGLLLLTNDGGLAKVIAHPDTGWLRRYRVRAHGDTDQAQLDRLAKGVTIDGMEYGPVEATL---------------DRVQGDNVWLTLGLREGKNREVKRILEHLGLSVNRLIRLSFGPFQLGDLEVGLVEEV--
>UniRef50_Q1IJT7(47-249:680) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJT7_ACIBL  E=4e-38 s/c=0.79 id=36% cov=77%
----------------------------------------YVLLHKPKGYVTTVSDPEGRETVMDLVKgiPARLYPVGRLDYLSEGLLLLTNDGEMAAKLTHASTHVPKKYLVKVSGEPTEEQIQELRNGVQLP-----PEQGHIHADPREGGRFGGEKRRSTAVKTApckieltregdnpWYEVTLNEGRNRQIRRMFDFIGHHVEKIKRVEYGPLKL-DVENGEFR----
>UniRef50_A0PYR9(32-217:229) Pseudouridine synthase n=9 Tax=Clostridium RepID=A0PYR9_CLONN   E=4e-38 s/c=0.86 id=28% cov=77%
-------------------------------KRIKPKKKVYILLNKPVGITCT-SSKDIKANIIDFVNYRDyIFPVGRLDKKSEGLIILTNDGELSNKILESENMHEKEYVVKVDKPFDDEFIENMSKGVQLKGVKTRTCIVRRIDE-------------------CTFKIILTQGLNRQIRKMTRAFGYTVVKLKRIRIMNLKIDGIDIGSFRHFTE
>UniRef50_C4ZJR2(167-345:379) Pseudouridine synthase n=2 Tax=Betaproteobacteria RepID=C4ZJR2_THASP  E=5e-38 s/c=0.89 id=35% cov=76%
---------------------------------------RVLIYHKPEGEIVSRDDPEGRPTVFERLPILRKgrwLAVGRLDFNTSGLLLFTNDGDLANKLMHPRYELEREYAVRILGELTEEQVKSLTDGIQLEDG---PAKFNLLRDEG------------GEGANHWYRVTISEGRNREVRRMFEAVGLTVSRLMRVRYGSVELPaRLKRGMWMEMPE
>UniRef50_Q3J464(61-230:508) Pseudouridine synthase n=15 Tax=Bacteria RepID=Q3J464_RHOS4   E=5e-38 s/c=0.94 id=39% cov=76%
-----------------------------------PEPARLWLYYKPEGLVTSASDEKGRETVFDHLPEgmPRVMSVGRLDLNSEGLLLLTNDGELKRRLELPSTGWLRKYRVRVKGNPTDADLEPLRKGITVEGESFQPMTVSL---------------DRVQGANAWLTVGLREGKNREIRRAMSALGLTVNRLIRVSYGPFRLNELEPGMVEEV--
>UniRef50_Q2NZN4(65-267:286) Pseudouridine synthase n=13 Tax=Xanthomonadaceae RepID=Q2NZN4_XANOM   E=6e-38 s/c=0.78 id=35% cov=81%
--------------------------------QPLTGPARcYLMLNKPRGVVTTVRDEQGRDTVYRCFDgagLPWIAPVGRLDKASEGLLLFSNDPQWAATVTDPATGPDKTYHVQIDCLPNVAQLAQLQAGVVDPDP----------EGEGMLLRAKQVSVLREGERNAWLEIVLDEGRNRQIRRLLAAVDIGVLRLMRVAIGPLAMGELGKGAWRMLS-
>UniRef50_UPI0001C37F9F(6-192:201) RNA pseudouridine synthase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37F9F  E=7e-38 s/c=0.85 id=31% cov=82%
----------------------------------------YYMFNKPQNCVTAKRD-AVHRTVMDFFPAdlsERLHPVGRLDKDTCGLLLLTDDGDLDFRIMQPDRHVSKTYFFYAIGTMDDEKIRSLEKGISMVGFTSRPASFRLIRkyRISQLEEFFPSERRERYLknpdgPAFAAELTIHEGKKHEVKRMLEAVHCKIFYLKRISIGGLSLDDsLAEGQYRPLND
>UniRef50_Q12AB3(150-325:544) Pseudouridine synthase n=8 Tax=Proteobacteria RepID=Q12AB3_POLSJ   E=9e-38 s/c=0.90 id=35% cov=80%
------------------------------RVRIDPPPPRVIAYHKPSGEVVTHDDPQNRPTVFRRLPKlfQGKWqSVGRLDLNTEGLLLLTSSGELANKLMHPRFGLEREYAVRVLGALSNEEKKRLLEGVTLDDGVAQFSSIEAGGGEGA---------------NCWYRVTISEGRNREVRRMFEAVGHAVSRLIRIRYGAMLLPrGLKRGAFVELDE
>UniRef50_C5KJS4(23-231:267) Pseudouridine synthase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KJS4_9ALVE  E=1e-37 s/c=0.76 id=41% cov=80%
-----------------------------------------LLMHKPAGYVVSRDDPLNRDTVFQLLPDPSVYigASGRLDKDTTGLLLLTNDTYLQSSLVDPVYKVPKVYRVVVKGaALNGAQLMALRSGVSLEDGPTLPALVEPLDVNGDPLPLEMSEYDR--YKCKQLNITLWEGRNRQVRRMVEAVGSTVRDLCRIQLGPFSLHaaGVPnPGDVRQLT-
>UniRef50_Q31H34(68-249:261) Pseudouridine synthase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31H34_THICR  E=1e-37 s/c=0.87 id=33% cov=73%
----------------------------------------LMAYHKPVGVVCTHDLSVANNLVVSTGLMQHFSAMGRLDKASEGLMILTNQGDLTNHILQPGFAHEKEYWVEVDQPLTEYFLTNMQQGVEIMGQVTRPCEIEATGE-------------------HCFRIVLTQGLNKQIRRMCKSLGYRVLRLQRVRIAQVWLDDLPVNTLRELND
>UniRef50_D2R7V9(73-255:811) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7V9_9PLAN  E=2e-37 s/c=0.86 id=37% cov=75%
------------------------------------KPQRlYFVVNKPEGVVTTNYDQAGRTRVIDLVPTdERVFAVGRLDRASEGLIIVTNDGEFANRVTHPRYGVTKTYLVRVAGEASTAELAKLRRGIHLSDGFCKVDAIQV---------------KRRHKQSTDMVIQLSEGKNREIRRILARIGHKVLKLKRLAVGSLKLGELPLGAWR----
>UniRef50_B2UKZ1(60-225:230) Pseudouridine synthase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKZ1_AKKM8  E=3e-37 s/c=0.95 id=40% cov=60%
---------------------------------------------------------------------PAVSSVGRLDKETSGLLLLTDDGKFIHRMTSPRHHVAKVYEAVTEEDIPTEAVELFASGTLTLNGETRPCA------PALLEIREP----RRAL------LTLTEGKYHQVRRMLAAVGAPVLSLCRVSIGSLHLDslNLKPGEWAPI--
>UniRef50_C8P302(30-221:229) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P302_ERYRH  E=6e-37 s/c=0.81 id=31% cov=73%
----------------------------------------YFMMNKPAGYICEHNPEM-YPSVLELIESyhRDLVFVGRLDADTEGLLLITNDGQFSHRVAHSKSNVHKQYYVELDKPFDLRFCEELEKGMMLGDELLKPAQVEVVGERA-------------------IHLTIGEGKYHQVKRMMHACDNEVTYLKRIKIGALELDsSLQPGAYRDLSE
>UniRef50_A3CLN2(17-227:241) Pseudouridine synthase n=59 Tax=Lactobacillales RepID=A3CLN2_STRSV   E=2e-36 s/c=0.73 id=32% cov=76%
--------------------------------------HRYYMLNKPSGAVTANRDAE-KLTVLDLLDkeieKENLYSIGRLDRDTEGLLLITDNGPLGFQLLHPQYHVEKTYYVEVNGPLTSQDKIAFQEGIRFLDGT--------ICQPAQLSILSSSSSLSRAT------VKISEGKFHQIKKMFLAVGVKVTYLKRIQFGDFTLDpDLAKGDYRALNQ
>UniRef50_C7PFL3(41-224:389) Pseudouridine synthase n=3 Tax=Bacteria RepID=C7PFL3_CHIPD   E=2e-36 s/c=0.84 id=31% cov=77%
-----------------------------TAAKKEKRV--YLALNKPPG-ITTTTELHIKDNIISFVNYPqRIFPIGRLDKDSEGLIFLTNDGDIINKILRAANNHEKEYVVRVNKPIDTNFLHQMSQGVPILDTRTLPCKVQMTGRQTF-------------------RITLTQGLNRQIRRMCEYLGYTVVGLQRVRIMNVRLDKLPLGKWRYLSE
>UniRef50_D1BMI6(35-223:232) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BMI6_VEIPT   E=4e-36 s/c=0.81 id=32% cov=72%
----------------------------------------YVKFHKPKGYVTAVED-SNHPVVMDLLPPEfikmGVVPVGRLDKDTEGLLLLTNDGVWGHSIINGNKHVPKIYYVEFEGTLSDEGIQRIKKGILLGDGTqCKPAEIEFVSLHS-------------------VHVTIEEGKYHQVKRMIGAAGGTVTYLKRLTIGHIDLSGIEEvGSAMELT-
>UniRef50_B7J5G3(48-241:251) Pseudouridine synthase n=3 Tax=Acidithiobacillus RepID=B7J5G3_ACIF2   E=5e-36 s/c=0.79 id=33% cov=75%
--------------------------------EPIDHPHAfYLLYHKPLGKVCAHDDP---RAIYQDFPLrwryrrPALSSVGRLDRETSGVLLLTDDGDWLHHWTSPRRAIPRVYRVTLQEPLRSDAADILAAGTLMldgEDTPCRPAALHCLTE-------------------REVRLTLTEGRYHEVRRMFAALDNLVLTLHREAYGPFLLDDLPAGQWRELT-
>UniRef50_Q140U9(269-445:633) Pseudouridine synthase n=80 Tax=Proteobacteria RepID=Q140U9_BURXL   E=6e-36 s/c=0.86 id=36% cov=80%
------------------------------KRKLASKPPRVLLYHKPTGEIVSHADPEGRPSVFDKLPPMKTAkwlAVGRLDFNTEGLLMLTTSGDLANRFMHPRYSVEREYAVRVVGELAEGMRQKLLHGVELDDG---PANFLRIRD------------GGGEGTNHWYHVALAEGRNREVRRMFEAAGLMVSRLIRTRHGPISLpKGLKRGRWEELED
>UniRef50_Q1D9N8(80-251:268) Pseudouridine synthase n=4 Tax=Cystobacterineae RepID=Q1D9N8_MYXXD   E=9e-36 s/c=0.88 id=40% cov=75%
-------------------------------------PTRVLAFHKPAGLLSSTERQHRTGTVFEaLLPqlPPELagytwHAVGRLDVDSTGLLLFTNDDKLVAHATSPDAHLPKRYVATVFSTASDERVEPLRRGMTLDDGPARPAKVNVRDEHT-------------------VEVTLTEGRHHQVKRMLGAVGLPVRALHREAVGSVDLEGIPEGTFRLLTD
>UniRef50_D0SB72(37-230:368) Pseudouridine synthase n=5 Tax=Acinetobacter RepID=D0SB72_ACIJO   E=1e-35 s/c=0.78 id=30% cov=82%
----------------------RIDGRKVSFQIEDEIRRRVLIYYKPEGEICSRNDPESRPTVFDQLPAianDRWVMVGRLDINSTGLLLFTNDGELANRLMHPSNEVEREYAVRVMGEVTPQIKNNMLKGVVLDDGPAKFESFSEIGGEGI---------------NRWYQVVVKEGRNREVRRIFESQGLKVSRLLRTRYGTVILPrELRTGRWMEL--
>UniRef50_Q0AS26(56-231:372) Pseudouridine synthase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AS26_MARMM  E=4e-35 s/c=0.85 id=36% cov=79%
------------------------------KRIEPPAATKLWRYHKPDGLVTTHADPEGRETVFDAIPKDigRVISIGRLDLTSEGLLLLTNDGALARALELPSTGWTRRYRARAFGSISESALKILRAGVTVEGIKYGPMEVEV---------------ERETGSNIWLEVGIREGKNREVRKALDAVGLRVNRLIRIAYGPFQLGQLEKGEIKSV--
>UniRef50_C3X1E1(224-402:510) Pseudouridine synthase n=2 Tax=Oxalobacter formigenes RepID=C3X1E1_OXAFO  E=4e-35 s/c=0.84 id=34% cov=76%
---------------------------------------RVLTYHKPAGEIVSRDDPEKRPSVFDRLPLlknSKWLAVGRLDFNTEGLLLFTNSGDLANRLMHPRYNIEREYAVRTLGELEEGMRQKLLAGVDLGDGIGQFSKI---------------VDGGGEGVNKWYRVTIGEGRNREVRRMFEAVGLTVSRLIRTRYGAVVLSQsLKRGRWDELEE
>UniRef50_A8I6C3(73-252:717) Pseudouridine synthase n=6 Tax=Alphaproteobacteria RepID=A8I6C3_AZOC5  E=5e-35 s/c=0.83 id=36% cov=77%
---------------------------------PERERTRLFLYHKPIGVVTTNRDPEGRTTLFELLPghLPRLVSVGRLDINSEGLLLLTNDGGLARVLELPETGWLRRYRVRAKGTVDQAQLDALIKGIVVEGVEYGPIEA---------------VLDRVQGANVWITVALREGKNREVRNVLGALGLQVNRLIRISYGPFQLGEIAEGGVEEV--
>UniRef50_A3UFV9(45-238:354) Pseudouridine synthase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFV9_9RHOB  E=5e-35 s/c=0.77 id=36% cov=75%
-------------------------------------PTRVWRYHKPVGLLTTHSDPQGRDTVFQTLPQDmgRVISVGRLDLNSEGLLLLTNDGELARVLELPSTGWTRRYRVRAYGNASDKALAELENGTVVDGVVYGPVEVTV---------------DRRTGANVWLTVGIKEGKNREVRKVLQSVGLTVNRLMRVAYGPFQLGSLKRGEISE---
>UniRef50_C9LMF3(49-264:277) Ribosomal small subunit pseudouridine synthase A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMF3_9FIRM  E=1e-34 s/c=0.69 id=29% cov=81%
----------------------------------------YYMLNKPAGVITATEDRY-QKTVLDFFGERrrkDLSPVGRLDKDTVGLLLVTNDGGFHHRLLSPKKHIDKEYYARIDGRVDEADREKFEKGIYVDEIFTaLPAKLMIDGYRENALESDFMDLANSRAPKSALEngvseirVVVQEGKFHQIKRMFHALGKEVIYLKRIRIGSVVLDpTLEEGTYRRLT-
>UniRef50_B0S303(22-224:235) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S303_FINM2   E=3e-34 s/c=0.72 id=32% cov=73%
----------------------------------------YFVMNKRKG-VTSHSKDPMHKTVIDDmgeLCVFDLNPVGRLDLDTTGLLIITNDGKFAHNLISPKKDVSKKYKVTLRDKVDEKYNDTFEKGIKLmpEDIVTKPAKMEIIDDYNCY-------------------LTIKEGKYHQVKRMFEKVGNEVVELQRVQIGDFKLPeDLEEGDFRELTD
>UniRef50_A5IXL5(66-223:246) Pseudouridine synthase n=3 Tax=Mycoplasma RepID=A5IXL5_MYCAP   E=4e-34 s/c=0.92 id=27% cov=73%
---------------------------------------KYYLLNKPKNTITTSKDPKGRHTVIDLINTsERIVPVGRLDRNTTGVLLLTTDYELVNKLTHPKYEIERVYRARIDSPLTLKEFRELNAGIEIDGKMSY-QIVDQVDTKSYL-------------------ISLHVGSYHHVKKLFEKIGHSVLTLKRVSYANLTVDKLPEGMYRELT-
>UniRef50_Q30NZ7(45-227:228) Pseudouridine synthase n=3 Tax=Campylobacterales RepID=Q30NZ7_SULDN   E=7e-34 s/c=0.79 id=36% cov=72%
----------------------------------------VILMNKPHGVVCSHSDSGV--LIYSLLPPrwqrrnPKVSTIGRLDIDTTGAILLSDDGALNHKLTSPKSEVTKIYEVTLAQALRGDEAEIFASGELLLNGekkPLLPAKMEVIGPIH-------------------VRVEICEGRYHQVKRMFASVGNRVTALHRASFGDFSVEDLKPSEFREIS-
>UniRef50_A6EPE0(62-227:291) Pseudouridine synthase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EPE0_9BACT  E=1e-33 s/c=0.87 id=29% cov=74%
----------------------------------------YIILNKPVGITCT-TDLRVEGNVVDYIDhKERIFHVGRLDKPSEGLLLMTNDGDIVNKILRAGNSHEKEYFVKVDRPITTEFIRRMGNGIPLEELET-----------------TTKKCFVEQVSRFVFRIILVQGLNRQIRRMCEYLDYEVMELKRERIMNIELGDLPYGEWRDLTK
>UniRef50_B4W9R3(126-317:519) Pseudouridine synthase n=2 Tax=Brevundimonas RepID=B4W9R3_9CAUL   E=1e-33 s/c=0.76 id=34% cov=80%
------------------------------------QATRVWRYHKPAGLLTSHSDPTGRPTVFDALPAglPRVISVGRLDLATEGLLLLTNDGELSRALELPATSLVRQYRARARGKITQEQLDKLKDGVVVDGVSYGPIEATL------DKAKESKSEDGRAPANLWISVSITEGKNREVRKVLESVGLTVNRLIRLAYGPFRLDVLPIGSVEEV--
>UniRef50_D2UX35(127-314:362) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2UX35_NAEGR   E=2e-33 s/c=0.77 id=34% cov=74%
---------------------------------------KLYAYHKPRGVLCSRVDNGGnRETIYQRLERMGfghLISVGRLDYNSEGLILLTNDGNLSRHLELPQTGLERQYLVRVHGQVSQPLLDSLQKGSTIEGVHYAGMKATL---------------HREGEKTSWIKVILHEGKNREIRKIFQQLNLPVSRIMRIQYGPYKLENIQKGQIK----
>UniRef50_O66829(39-222:238) Uncharacterized RNA pseudouridine synthase aq_554 n=1 Tax=Aquifex aeolicus RepID=Y554_AQUAE  E=3e-33 s/c=0.78 id=31% cov=83%
------------------YRVKEGEEVEVEGKSVKPKKNVYLMLYKPKGYLSTTEEDKKYPSFLELIrehfPSRKLFSAGRLDVDAEGLLLITDDGELAHRLTHPKWKVEKEYIVRLDRDIGDEELKKLYE-VKLEEKPVQLVKAEKLSGDT-------------------VKAILTEGRHHVVKRLFKAVGHNVVYLKRTRVGNLRLDeNMEPGEWRELTE
>UniRef50_A6LUE3(35-269:281) Pseudouridine synthase n=3 Tax=Clostridium RepID=A6LUE3_CLOB8   E=3e-33 s/c=0.61 id=25% cov=82%
----------------------------------------YIVLNKPVGITCTAENKVSDNIISYMKYPHYIFPVGRLDKDSQGLILMTNDGEVANRILESDNMHEKEYLVQVNKNFDDEFLKRMSNGVEITGNKSSgvrrisdklglykkiedkeillgeedPGDSSIVQLKELKNIEREQNKFVKTRPcqvervdDNTFKIILTQGMNKQIRKMSGALGYKVIKLERIRIMNIKLNDLETGKWRYLEE
>UniRef50_B6EJI1(50-231:354) Pseudouridine synthase n=8 Tax=Gammaproteobacteria RepID=B6EJI1_ALISL  E=5e-33 s/c=0.79 id=31% cov=75%
---------------------------------------RVLAYHKPEGELCTRHDPEGRRTVFDRLPKikdSRWVSVGRLDANTAGLLLFTTDGELANRLMHPSRKVEREYMCRIFGDINDKMVKNLVTGVKLEDGEARFEDVMYAGGEGM---------------NHTFYVVINEGRNREVRRLWDSQGVTVSRLKRVRYGDIFLEKaLPRGGWMEL--
>UniRef50_C6XQT2(85-256:508) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XQT2_HIRBI  E=8e-33 s/c=0.83 id=33% cov=79%
------------------------------KRVGGPDKTRLWRFHKPKGLVTTNSDPEGRPTVFEHLPKklPRVMTIGRLDLNTEGLLLLTNDGELARTLELPTTGLKRCYRARAFGKITQAELDKLQEGVLFEGVVYRSIIATLDKTKGD---------------NNWIDMTLTEGKKREARRALESVGLIVNRLIRVSYGPFELGDLVEGGVAEI--
>UniRef50_C1XNC4(80-242:257) Pseudouridine synthase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNC4_MEIRU  E=1e-32 s/c=0.87 id=38% cov=58%
-------------------------------------------------------------------------PVGRLDKDTEGLLLLTTDGELLHRLTHPRWKVTKRYYVELASPATPEDVAVFAAGtLELEGEPLQPAELYLGPDP------------------RKVELVLREGRFHQVKRMFAARGNQVTYLKRLAFGpLQLPPNLPPGASRQLT-
>UniRef50_D1B9Q8(40-214:234) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Q8_THEAS  E=2e-32 s/c=0.81 id=32% cov=70%
----------------------------------------YIVMNKPRGVVCAVEDRR-YRTVLDLLPPQiralRPFPVGRLDKESQGLLILTNDGDFCDAILHPRRGIIKTYEVTVDRDVPSESLDRLKGGVWSDGEILEPLMVSLMGPRT-------------------VRVDIQEGKKREVRRMMAALGFKVLSLLRRRIGKMELRRLRAG-------
>UniRef50_D2MQD6(46-220:231) Pseudouridylate synthase n=1 Tax=Bulleidia extructa W1219 RepID=D2MQD6_9FIRM  E=2e-32 s/c=0.80 id=28% cov=73%
---------------------------------------QYLMLYKPAGYISA-TEGRYDPTVLELVPnYKGLFPCGRLDKDTEGLLLMTNDGRLAHNLLSPKKHVEKEYYVEHQLPLSQEDVLCIERGIRYKNITYKGAKLKILDDLQCT-------------------IILQEGKYHEIKNIFLAIDNKVTYLKRIRMKNLILDEtLKKGEYRPLSE
>UniRef50_C7REA2(62-224:232) Pseudouridine synthase n=4 Tax=Anaerococcus RepID=C7REA2_ANAPD   E=4e-32 s/c=0.86 id=31% cov=73%
----------------------------------------YVMMNKPAGFLSATedKDPTVIDLLDDFYKVIDLSIAGRLDKDTTGLLLLSTDGKFIHKVTSPNSNIEKTYLVECRDKIDESLIDLFKEGVYIkeDDYTARSAKLEILEEKKAI-------------------VKVTEGKFHLVKRLFSNCCNKVEKLKRIAIGDLSLDeHLAEGEYRELSD
>UniRef50_Q1H048(65-251:383) Pseudouridine synthase n=4 Tax=Betaproteobacteria RepID=Q1H048_METFK  E=7e-32 s/c=0.74 id=32% cov=72%
----------------------------------EPELPQVLLYHKPEGEIVSHDDPENRASVFDKLPriRNGKWIAiGRLDMNTSGLLIFTTSGELANRFMHPRYEVEREYAVRIFGELTEGEMAQLTYGIELDDG---PANFDSIRPQG------------GEGANHWYEVILREGRNREVRRLFEAFQKPVSRLIRVRFGPVNL-------------
>UniRef50_C8N9M2(30-136:141) RNA pseudouridine synthase family protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9M2_9GAMM  E=1e-31 s/c=1.29 id=54% cov=47%
----------------------------------------LILLNKPFNVLCQFTDKSGRATLADYVDVPNVYPAGLLDFDSEGLVVLTDDGRLQARIADPRFKLAKRYWVQVEGEADEAALVQLRAGVWLKDkkaqtaRKTLPAEV----------------------------------------------------------------------------
>UniRef50_C9M8T9(40-227:241) RNA pseudouridine synthase n=2 Tax=Synergistaceae RepID=C9M8T9_9BACT  E=2e-31 s/c=0.73 id=32% cov=75%
----------------------------------------YIVIRKPRGYICAVT-NPDYPVVLDLLPRSydrlRLFPVGRLDLQSEGILILTNDGDFANDLIHPSNGVTKTYEVRMNRVLTAADLENLRGGTVFEGRRLVPLSVDL------LPDRRPE--------GQWATFVLGEGVKREIRLMAEGCGMTVEVLFRRAIGRMELRTLKSGEFVEVT-
>UniRef50_B1ZYG8(51-227:266) Pseudouridine synthase n=3 Tax=Verrucomicrobia RepID=B1ZYG8_OPITP   E=2e-30 s/c=0.76 id=29% cov=74%
------------------------------------QPRVTLAMHKPRGLVCTNEDPHNPETIFSVLPREfaklRFFCAGRLDKDSEGLVILTTDGDLAHRLMHPSNLVVKRYHVTLEKPFPAKRLPLLVKGVIAQGERLKVERAALINPSVSHEATN-------------LDVHMHHGKKREIRLLFTELGYPVKRLRRYQIGGFRLKGIP---------
>UniRef50_Q4AAG8(32-221:240) Pseudouridine synthase n=6 Tax=Mycoplasma RepID=Q4AAG8_MYCHJ   E=3e-30 s/c=0.70 id=23% cov=71%
-------------------------------------------LNKPKNYITSRFDPENRPTIMEFFSKnEYLFPVGRLDFQTTGLILITNDGKTTNKLLHPSSKIERTYLVKTDFSLSDKEIRFLNDNKIQLDSVKSIQKIKKCSSRTYL-------------------VTVWQGSNHHIKKLFLSISKKVLKLKRVSFANIKLDNISEGKYRKLT-
>UniRef50_A6GU42(10-200:214) Pseudouridine synthase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU42_9BURK  E=4e-30 s/c=0.70 id=30% cov=73%
---------------------------------------KYVLMHKPAGYETSHL-PSHNPSVFDLLPkhyiKRGLQAAGRLDVDTTGLLLFSDDGQFIHRLISGkvgtKQEIEKIYEVTGARPFSDLQLQRLLEGVDLDD------------EPEIIYASRATL-----LADGRLELGITTGKYHQVKRMVAAVGNHVDGLHRRSVGPYELPaDLAAGSYIEI--
>UniRef50_C1SPF0(41-221:229) Pseudouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPF0_9BACT  E=3e-29 s/c=0.72 id=30% cov=73%
----------------------------------------YWAFYKPKSVLTAYGDGHGKDTLeiYPFLREKKPAYSGRLDYDSEGLIIFSNDGDFIRRLQRAEEKVEKEYIVTVNRVLKKGEMDDLRKGIVYEGIRYRECIVEQHSHDRY-------------------QVVLHEGKKRQIRHMFRNFGIRVKKLKRVRIGSVNLNELQPGEFREFS-
>UniRef50_D1B371(12-184:194) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B371_SULD5  E=4e-29 s/c=0.75 id=30% cov=75%
--------------------------------------KKLFVLNKPKGYLVTRSDDLGRKTVYDLLPDwafnEGWMPIGRLDLDSKGLLLFTTNGHISNALTTPK-KCTKVYEIWVRGHVMDEHIAEALKGVQTSQGLLKALEVKKIGMGGA---------------KTKLSVVIDEGKNRHIRRLFGALKdpkfgtpLKVLELNRISIGDFKL-DIDIGTWRFLSE
>UniRef50_C3XG49(75-247:267) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XG49_9HELI   E=3e-28 s/c=0.73 id=29% cov=77%
-----------------------------------------IVYHKPKGELVSKKDSYGRKLIYDSLNARYAHfmPVGRLDFASEGLLILSDSKEVVSKLMH--SNLPRTYILKIDSHITKQMIKAMEEGLTLQN---AKAGGHRLSKIKTMEFMPMEYEIIKSASISKLKVRISEGKNRELRRFFAHFNANVLDLRRVSYGFINLNALPVGKTR----
>UniRef50_Q8T866(178-362:401) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q8T866_DICDI  E=1e-26 s/c=0.66 id=35% cov=72%
---------------------------------------------KNPQVLTSEYDPDGRdcllPIIRKVIGIDHLISVGRLDYYTEGLILFTNDGELARYLTLPQNLFFRVYKVRIFGKFTDEMKFSLAKGMVINEVFYRPVSVQVESETDS---------------NTWLRITLQEGKKREIRTLLEYFNVKVLRLIRVAYGPYVLPNsLKHGETIEV--
>UniRef50_C7HRX2(29-226:236) Ribosomal small subunit pseudouridine synthase A n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HRX2_9FIRM  E=1e-26 s/c=0.61 id=28% cov=73%
----------------------------------------YIMMNKREGLICQSNELDGTvmSDLDEFYLNLDLAIAGRLDKDTTGLLLMSTDGKFIHRVISPNSNIWKKYEVETSKKIDPDLVEIFKEGVYIkeDDYYARSAKLEIIEDKKAY-------------------VYVTEGKFHLVKRLFSNNDNEVVKLKRLAIGKLQLDKtLNPGDYRELTQ
>UniRef50_B7G3Y8(33-217:217) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G3Y8_PHATR  E=2e-26 s/c=0.65 id=29% cov=59%
-----------------------------------------------------------------FDSSKRIFPVGRLDKETSGLILLTSDGRVPNAVLRGRHKQPKIYQVWVDRPVLAKDVAQLRDGVIIttvaqrDGNRAEPLTARTKSCAVQVLGRE------------KLQLTLVEGRNRQIRKMLGALNYTVKRLHRVQFMELTL-------------
>UniRef50_D0RRJ0(46-226:245) Ribosomal large subunit pseudouridine synthase B n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRJ0_9RICK  E=6e-25 s/c=0.64 id=26% cov=58%
--------------------------------------------------------------------------AGRLDFKSEGLIILTNDSSLTRNLELPKNKFERKYEVRIFGDFNVEKLKIKSRGTKINGIQYKPFDFKIKSKIKK---------------NTLIEMNLKEGKKNEIRNIFKELNLQVNKLKRVSYGPFKLDNMLPGDLK----
>UniRef50_C5KUW6(22-182:182) Ribosomal large subunit pseudouridine synthase B, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUW6_9ALVE  E=9e-25 s/c=0.71 id=32% cov=71%
----------------------------------------LFAFFKPRGMETTCTAGSG---LRKFLDRGRLHPVGRLDRDTTGLLLLSSDGDCTNRILH--STINKTYAALVRGVLPEGLMKKvVSEGVDLPDGHVDVTRLETIND-GDTVPFGLVAYPLSSIPTngcSMVRITTTCGRNRVVRRTLCALGHPVLLLHREEIG-----------------
>UniRef50_C1N3G7(124-347:386) Pseudouridylate synthase (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N3G7_9CHLO  E=2e-24 s/c=0.51 id=32% cov=72%
-----------------------------------------VVLNKPPGYVS-NLPSRGEREASELITPRNaiyhhstgggvvgggadadaatrrkledvcrdaraLNVCGRLDKDSRGLLVLTTDGVLARAIV-GGNEIPKVYEVVVDAIATREQLAALNGPVALDGERLLPMRVETLEG-------------------TTLRFELRQGKKRQIRRLCEGLALRVLDLRRVHVGTCDVGDLPEGRWRLMSE
>UniRef50_C6HUV8(52-219:237) Pseudouridine synthase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUV8_9BACT  E=2e-24 s/c=0.68 id=32% cov=74%
------------------------------------------CLNKPRGVLVTLSDPEGRPVVGDFLrrtpwsdgSFGRIRPLGRLDAASAGLLLLTNYQEPWSHFLSPEGGVRRRYRVKIRPGLRAEDRKLFLSGKAGEGAGYRRVEVEI---------------EREGPKSSWLLISLVEGRNREIRNVLTYHGYEVLHLIRLAFGPFLLGDLKPGEVSSVTE
>UniRef50_B7G6C8(1-122:151) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G6C8_PHATR  E=4e-24 s/c=0.93 id=38% cov=56%
------------------------------------------------------------------------HPVGRLDYDTSGLLLFSSSGALTQRLLHPKHEVEKEYVAVVTGIVVEDELRA-----------TLAAGVRGY------------LNVFDAQALSTVRLTVSEGKHRMVRRILANCGHPVVSLHRDRLGAVALNDLPAGEYRPLT-
>UniRef50_A6FY13(26-235:238) Ribosomal large subunit pseudouridine synthase B n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY13_9DELT  E=4e-24 s/c=0.54 id=30% cov=77%
------------------------------------REHAHLMLHKPHGVVTARADGR-HPTAYALLEgaplFAELRAVGRLDLDAVGLLLWTTDGQLVHALTHPRRAVPRTYHVALaapfEAPPRDDDgavALELRDGL----RPRVVALGALDEAAAHPALLTPPGTE------ALATVTLLDGAYHEVKRIFAALGSHVLCLARVRHGPVELPrTLEAGAWQ----
>UniRef50_A2VW10(3-109:193) Pseudouridine synthase (Fragment) n=1 Tax=Burkholderia cenocepacia PC184 RepID=A2VW10_9BURK  E=1e-23 s/c=1.04 id=45% cov=50%
----------------------------------------LIALNKPFGTICQFSAHETRPSLGDWVKTPGVYAAGRLDADSEGLLLLTDDGGLQARIAEPRHKLVKRYWAQVDGAPGPADLKALARGVDLGDYVTRPCRAEFIEPP----------------------------------------------------------------------
>UniRef50_B6KG51(70-279:286) 16S pseudouridylate synthase, putative n=3 Tax=Toxoplasma gondii RepID=B6KG51_TOXGO  E=2e-23 s/c=0.53 id=43% cov=65%
--------------------------------------------------------------------------AGRLDVDSTGLTVFTQDGRLASQLVGPGKRVSKEYHVEVDLPVSAGALTLLRHGLSLDGLELLPAKVRLLSPlrDAFFSPLPTSTVSISSFPsrsgsrpvsetpahlctdfrqgesisspsltvsvsssvaakekpgdrraedeeadaevkesemwvgkTTRLSIELLEGRHRQIRRMCELVGLRVLKIHRIRIGKVSLGNLPQGRWR----
>UniRef50_Q6AQ25(11-118:130) Probable ribosomal large subunit pseudouridine synthase B n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ25_DESPS  E=4e-23 s/c=1.02 id=32% cov=49%
------------------------------------------------------------------------------------------------RPCHPSYETFKTYEADLSGTPSRAKLQRLEQGILLEGKPTAPARVKILSQKKH---------------STKVAITIHEGRKHQVKKMFAAIGHPVNHLKRIAYGKLELQTLATGQFKRLS-
>UniRef50_Q2P564(49-230:236) Pseudouridylate synthase n=16 Tax=Gammaproteobacteria RepID=Q2P564_XANOM  E=3e-15 s/c=0.46 id=24% cov=72%
-----------------------------------------LLLHKPAGVSVEAALALATPTTRSALDQSDIRVLKRhflrltaplpLENAASGLLILSHDGRVLRRLSADASSIEQEFLVEVQGDVRPYGMARLAHGLVYQQRSLLPCKVSWQNEDR-------------------LRFAIKNVQPGQLRYMCGEVGLEVVSIRRLRVGRVSLGKLAIGEWRYL--
>UniRef50_D0RNQ1(101-247:288) Pseudouridine synthase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNQ1_9RICK  E=1e-12 s/c=0.51 id=26% cov=46%
------------------------------------------------------------------------YIVHRLDKDTSGLMLLAKNRFYAKKFSEmfKSREVKKKYLVIINGKIKKNKGEIHSKekvnGKEIESKLY----FEVISKKNNF---------------SYLEIDLITGRKHQIRKQFSDIGHP---------------------------
>UniRef50_C0N835(93-240:279) RNA pseudouridine synthase family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N835_9GAMM  E=2e-11 s/c=0.49 id=25% cov=65%
---------------------------------------QYSIWNKPYGMLSQGSKWGDHCTITRWaeqhlTPQRNAFVVHRLDRAANGLIIVAHEKKAAALLsgLFQSRQIEKRYQIWVEGEFSEQA--------TVDN----PVKVDLDLDGRHAVSFFTRLKFDASKQQSLLDVRIETGRKHQIRQHAASLGHP---------------------------
>UniRef50_B9DS29(85-243:301) Pseudouridine synthase n=85 Tax=Firmicutes RepID=B9DS29_STRU0   E=2e-11 s/c=0.45 id=25% cov=57%
-------------------------------------------------------------------PNKQVHIVTRLDRDTSGLMLFAKHGYAHARLDKqlQKRSIEKRYFALVSGNGQLPDFGEIVEPI---GRSKDSIITRTVDPMGKYAKTTYEVVARFAENVHLVDIKLHTGRTHQIRVHFSHIGFPLL-------------------------
>UniRef50_A4VJJ2(118-237:241) S4 domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VJJ2_PSEU5  E=2e-11 s/c=0.59 id=23% cov=56%
------------------------------------------------------------------------------DADASGLSVLSQQREVIRLLGDTRNKLEQEYVVEVSGEAEEGGLALLAKGIGHRGRILPKAKVSWQSE-------------------NRLRVVVKEPAPGEVRMLCEAIGLRVVASKRIRIGRLSMAKLPVGHWRFLGE
>UniRef50_Q6MMV3(34-219:290) Pseudouridine synthase n=2 Tax=Bdellovibrio bacteriovorus RepID=Q6MMV3_BDEBA  E=7e-11 s/c=0.37 id=29% cov=54%
---------------------------------------------------------------------QHVYPVHRLDAGTSGVLLFALSSESASKLCRlfTERATHKTYQAVVRGFVKEEGevqlpLELDSTG-DLVDAHTSFKRLATVEFPVAVGKKFPTARY------SWVEVTPHTGRYHQIRRHFNRISHPLL-------------------------
>UniRef50_C7LQ47(90-251:281) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQ47_DESBD  E=7e-11 s/c=0.43 id=30% cov=67%
--------------------------------------------NKPAAVLSQGTRFADHCTLprlaqAKLGSRNELHPVHRLDREARGIMLLAHDGKAAAKLGElfRQGAVVKEYAAIVRGIPDWTDIE--------------------VNEPLDGKEARSRFHVVQSDPASDMTLLLARidtGRKHQIRRHLNGLGHPVMGDPRYGRGTRQVQELQ---------
>UniRef50_B8CQ92(1-201:278) Pseudouridine synthase n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ92_SHEPW  E=3e-10 s/c=0.33 id=24% cov=57%
----------------------------------------------------------------------HVFPVHRLDRPTSGILLFAKSSEMANALCEqfAAHSIDKEYLAIVRGNMHEAatldyALKEELDDVADKDVDPNKAAQDAITSYKPLLNSEIPYASGRYATSRYALVHLspHTGRKHQLRRHMAHLRHPIL-------------------------
>UniRef50_C4Z0B5(60-264:333) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0B5_EUBE2  E=4e-10 s/c=0.33 id=29% cov=67%
----------------------------------------VIFINKPSGMLSQKAKPEDV-SLVEYLIAHLIHKgelnAGdlasfkpgicnRLDRNTSGIVAAgkTTKG--LQQLSEAFKQRTlgKYYLCIVKGNVDKRA---LIKGYLYKDNKTNKVTISRTETKDSLPIETEYIPVCSNGNVTLLKIHLLTGRSHQIRAHLASIGHP---------------------------
>UniRef50_A8H661(95-257:305) Pseudouridine synthase n=7 Tax=Shewanella RepID=A8H661_SHEPA   E=7e-10 s/c=0.41 id=27% cov=62%
---------------------------------------QYSVWYKPFGMRCQGSKWSDHTTINRFIetqltPPRNAYIIHRLDLAATGLIVLGHTKKVTAAIAQlfETRALDKFYQVIVEGKFPEGQ-------VTIN---TDVDNKKALSHAHILE-------YNSELNQSKVQVKIESGRKHQIRIHMASLGHP---------------------------
>UniRef50_Q6MND5(15-172:228) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND5_BDEBA  E=1e-09 s/c=0.42 id=26% cov=67%
-----------------------------------------LVINKPSG-VSVHNDPPDVRTLlkKQLTPgtYQDIHPVHRLDKETSGLLLVGLDAETAANLSGqfQEHKVEKTYYALLRGElPVSTDWQEWNTPISDKaEGRKNPQGL----LKDRVEARTLYKVLEANKYFSLVEVRLITGRQHQIRKHTA--------LIRHAI------------------
>UniRef50_UPI0001C42CC7(114-270:322) hypothetical protein BpOF4_01845 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42CC7  E=1e-09 s/c=0.42 id=25% cov=68%
----------------------------------------LLVINKPQGMPTIPSREHPSRTLANAVmgyyeshhIPFTFHAVNRLDRDTSGLLVVAKHGLAHDQLSKGQRagKLKRYYLALAEGFVQP------REGTIHAPIKRRPSSiIERMVAADGQEAITHYKVINDNQAYSEVEINLETGRTHQIRVHFAHLGHPLL-------------------------
>UniRef50_C7LP91(18-171:245) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP91_DESBD  E=2e-09 s/c=0.42 id=22% cov=53%
-----------------------------------------------------------------------LYPVHRLDRPTSGLMIMALSPQAAHALALqfASQEVHKTYLAVTRGFVPPQGL--IDDALKSESGSLQEARTEFTRLATAEIPH--PVGPNPTARYSMVRVRPRTGRTHQIRRHFAHIRHP---------------------------
>UniRef50_A0L7F8(22-177:255) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=A0L7F8_MAGSM   E=4e-09 s/c=0.41 id=32% cov=53%
--------------------------------------------------------------------------AHRLDRDTSGCLVLGRHAKALSKLGKlfSQGKVQKTYWAVVQGGPPQA--QGSMD-FPLYKISTAQQGWRMVVDPEQGKSSLTLYRvLGRSATHSWLELTPKTGRTHQIRVHCAHVGLP---------------------------
>UniRef50_B5ZBC1(37-243:299) RluA n=15 Tax=Ureaplasma RepID=B5ZBC1_UREU1   E=8e-09 s/c=0.30 id=26% cov=41%
---VLVNDNIITKQSYllqKNDSVEIKNEQCVIDSQKELLPfacpleivfedQDLLVINKPSGMLVHPTSFQEQNTLANalkhYLKTDDFYITHRLDKNTSGLIVICKN------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C0Q9S8(22-187:260) TruC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9S8_DESAH   E=1e-08 s/c=0.37 id=25% cov=53%
----------------------------------------------------------------------HVFPVHRLDRPTQGVLLFARNRNMATRMSHlfQTGKIQKTYLAVVRGHVKErgtivhplknikhpQDNKRINHSLKIDDAVTDYACLASVELPFYV-DRYPTTRY------CLVALIPKTGRRHQLRRHMKHISHP---------------------------
>UniRef50_A4A1L7(23-178:250) Putative 23S rRNA pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1L7_9PLAN  E=1e-08 s/c=0.40 id=35% cov=37%
----------------------------------------------------------------------------------------------------------KLYWAFVAGQPPDD------QGVWEDPIRKIPdvAMAEIVspSDPGARWAKLKYEVLQRTEQGAWLEIELDTGRYHQIRVQCASRGFPIL-------------------------
>UniRef50_B7G0Q3(6-168:200) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0Q3_PHATR  E=2e-08 s/c=0.38 id=24% cov=55%
-----------------------------------------------------------------------VFPVHRLDHRTSGALLFAFDSEMCASLhdALREQSARKTYVCLVRGFWDnffESDTATVDKALTVDG--TKRSATTVFTKLASTIILNNSAYGEKNVPISC-SLILavpTTGRTHQIRRHASAMGMPVL-------------------------
>UniRef50_D0XS67(120-278:350) Pseudouridine synthase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XS67_9CAUL  E=2e-08 s/c=0.39 id=24% cov=52%
----------------------------------------------------------------------------RLDRDTSGVLLLGKGPEAAKRLAGafARRQAKKTYWAIVMGLPKPADGQ-----ISVHLKKSGINDYEIMRPADPKDPGAEPaetayaVISHAAQRASWMALRPFTGRTHQLRAHMKAIGHPIL-------------------------
>UniRef50_A0YDZ6(87-228:280) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDZ6_9GAMM  E=2e-08 s/c=0.43 id=29% cov=27%
------------------------------------------IWYKPYGVLCQGSKWGDHCTIdrmIEIYTQKRSYLVHRLDRATTGLMIIAHSKDMAAKLS----------------------------------------------------------------------------------------------------------------------
>UniRef50_D1KBQ5(99-231:277) Pseudouridine synthase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KBQ5_9GAMM  E=3e-08 s/c=0.46 id=26% cov=44%
----------------------------------------------------------------------------RLDRATSGLMLIAHTKNMARDLSKmfADRNIDKTYLAIVEGKFTKEKI-TLEKPI---DGKNAVSHVTLLESEKF---------------KSLLKVKIETGRKHQIRKHLSEFSHP---------------------------
>UniRef50_C9KQC1(86-240:302) Pseudouridine synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQC1_9FIRM  E=3e-08 s/c=0.39 id=29% cov=65%
-----------------------------------------LVVNKPADMIVHPTHRAARDTLVHAVAgyferrgeAAGIHPLYRLDRDTTGIVILAKSARIQHAMTKHHGQIYREYLALAQGHLD-----------CLSGRIDMPIG-RDITRANHWQVRADGRRALTEYETiaswpaySLLKIHLLTGRTHQIRVHFAALGHPLL-------------------------
>UniRef50_Q2RQY9(73-258:330) Pseudouridine synthase n=3 Tax=Alphaproteobacteria RepID=Q2RQY9_RHORT  E=3e-08 s/c=0.33 id=23% cov=75%
---------------------------RALRRAILHEDAHLIVINKEAGLAVQgGTGTPHHldgmlESLADGGETPRL--VHRLDKDTSGVLVLARTQAAARALTSAfrSREALKVYWAIVVGRPPM--LQGTIKGALAKVAGGRGERMEINEEEGKRAVTDFRVVDQAAKACAWVELHPRTGRTHQLRVHCLEMGTPIL-------------------------
>UniRef50_D2M2K8(92-248:298) Pseudouridine synthase, RluA family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2K8_BACS4  E=4e-08 s/c=0.39 id=26% cov=66%
----------------------------------------VIIINKPPHLPTIPTRNEGEPSLAGAIlayyiengIPSTFHAVSRLDRDTSGLVMVAKH-RYMHDLcvkLQKSYEIKRSYVALVEGILSDDY--------NTIDLPISRKTTSIIEREVNEFGKSAITHYevlKRYSGATLLQLTLETGRTHQIRVHMSAIGHPLL-------------------------
>UniRef50_C0QV86(114-276:329) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QV86_BRAHW   E=4e-08 s/c=0.37 id=28% cov=65%
----------------------------------------LLVINKPAGMSVHCSPSEMSGTLvnallykiKDFDFVGNKERAGiihRLDKDTSGLMIIGKNANIVSSI-QEQFKnrtIKKIYHAIVVGVLKDNYIEINlpigRHHVYRKKMTVREDGKEALTHIKVLKRFNS---------HTLIEINLKTGRTHQIRVHSSYKGFP---------------------------
>UniRef50_B8K915(8-184:254) Pseudouridine synthase n=5 Tax=Vibrio RepID=B8K915_VIBPA   E=4e-08 s/c=0.34 id=33% cov=33%
----------------------------------------ILVANKPSGLLSvpgrleEHYDSLWSRLVAIY---PDIQVVHRLDMDTSGLMLLAKHkeaerslkKQFQYRLTH------KVYYARVWGHPTND-------------------------------------------------------------------------------------------------
>UniRef50_Q15QZ8(12-177:252) Pseudouridine synthase n=5 Tax=Bacteria RepID=Q15QZ8_PSEA6   E=4e-08 s/c=0.36 id=24% cov=55%
---------------------------------------------------------------------QHVFPVHRLDRPTSGVLVFALSADIARLLGEqfAGNTIAKTYFAIVRGHVKEaglidyalkEKLDKIADKRAKQDKDAQEAQTEYVPLQQFELPFA--VSRYPSARYTLVRLHPKTGRKHQLRRHMCHINHP---------------------------
>UniRef50_B3PEA2(76-248:291) Putative pseudouridylate synthase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEA2_CELJU  E=5e-08 s/c=0.35 id=27% cov=62%
---------------------------------------RYSVWYKPHGLLAQGSQWGDHCSLLRWVEVvrqRECFLVHRLDADAAGLILIAHDAQAAAALSQlfQGRSLRKHYQAWVSGELQATGL-RLEQPLDGKDALTWVNTA-VIDQPNN---------------RSLVDVRIETGRKHQIRRHLAAIGHP---------------------------
>UniRef50_B9JWI8(69-263:330) Pseudouridine synthase n=1 Tax=Agrobacterium vitis S4 RepID=B9JWI8_AGRVS  E=6e-08 s/c=0.31 id=26% cov=67%
---------------------------------------KVFVLNKPAGLAVQGGSGLNRhidQMLEAWTSKKGEKPrlVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDtkKTYWALVKGVPRKHDdkistwvvKEQTEDGDRMR-------IARHGEDGADHAVSYYRVLETAAQSLAWLEMEPYTGRTHQLRLHALHIGHP---------------------------
>UniRef50_C3RID1(75-233:278) Pseudouridine synthase n=3 Tax=Bacteria RepID=C3RID1_9MOLU   E=6e-08 s/c=0.38 id=24% cov=52%
-----------------------------------------------------------------------VHLVNRLDKDTQGLLLIAKNSYAHYLLSRDIKQVRRVYHCVVEGVLTG---QGTITAPIIKDKKS----VKRLIHPAGKFAVTHYRGLEVSANQSKIECILETGRTHQIRVHLSSINHP---------------------------
>UniRef50_A6FJ39(38-193:238) Pseudouridine synthase n=1 Tax=Moritella sp. PE36 RepID=A6FJ39_9GAMM  E=6e-08 s/c=0.38 id=23% cov=65%
----------------------------------------LVVINKPAGLLSVASANENkqhalailRKQLSHAKNSVALWPVHRLDRDTSGVLMFATSREMRDAVNEGWSGAEKTYLAVVEGSPKPSQ-GRIDQPLRMD-----PEKYQMIVGPHS--EAKNAVTHFKTLRTvkelTLLEVKLETGRQHQIRVHMAWLGH----------------------------
>UniRef50_A3HSB5(12-166:237) Pseudouridine synthase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HSB5_9SPHI  E=7e-08 s/c=0.38 id=29% cov=52%
----------------------------------------------------------------------HVHPVHRLDRPTSGILLFAKKEEILPHLKNlfSERQIKKNYLTIVRGIPEQKKalidhpLKSERSG-RLQEAQTWYKVISETEIPFDTTGRYPTSRY------SLLSVNPETGRTHQIRRHLAHIRH----------------------------
>UniRef50_Q8I5D3(164-301:409) RNA pseudouridylate synthase, putative n=2 Tax=Plasmodium RepID=Q8I5D3_PLAF7  E=7e-08 s/c=0.43 id=27% cov=38%
--------------------------------------------------------------VTNYIP-EHLIIINSLNSGSEGLLLLTNDGDFAKNLKDIQNNILTTYLIKVQEDLCIDKIKLLRKGCFINNQHIYPVNIEII-------------------------------------------------------------------------
>UniRef50_Q1MQ60(94-249:541) Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQ60_LAWIP  E=8e-08 s/c=0.38 id=28% cov=50%
----------------------------------------------------------------------------RIDKDTSGLLCiaLTEDTRLKLSKIFLDRKINKEYLALVHGVPSMEGYIAVPLG---RDPKT---KVKVAVNPKGKPAHTEwrVLHRGKNDVYSILALTIQTGRTHQIRVHMKHIGHP---------------------------
>UniRef50_A5INM9(92-233:304) Pseudouridine synthase n=7 Tax=Thermotogaceae RepID=A5INM9_THEP1   E=8e-08 s/c=0.42 id=31% cov=44%
----------------------------------------------------------------------------RLDKDTSGLLVVAKDREAARILTElfKDRNIEKEYVTLVRGTPE----NNMKITIPLDG---QEAISEIVSVKSL-------------RDVSLLRVKIHTGRKHQIRRHLSQIGFP---------------------------
>UniRef50_B5JL25(19-190:249) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL25_9BACT  E=9e-08 s/c=0.34 id=26% cov=54%
---------------------------------------------------------------------QHVYPAHRIDRPTSGILLFGLDeaaGTALSLLFQ-NREIQKNYLAVTRGHLPESGLidsplhkYEDADG-HIKSSETQEAETAYRRLATTELPY--PTERYDTTRYSLVELTPHTGRRHQIRRHLAHIRHP---------------------------
>UniRef50_Q6MA84(14-178:219) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MA84_PARUW  E=1e-07 s/c=0.36 id=32% cov=70%
----------------------------------------LFVLNKPAGLLTQPSgtahdslESQAKAYLKIVYQKPGnvfLEAVHRLDKPVSGIVVF---GKTSKALTRlnasvRAKQTKKIYYAWVDSVPVDEQ-KTLENFLIHNDFQAQVVSSKH--PQAKLAKLTYRVIERKSV-GALLEIKLETGRYHQIRAQLAHLGCPIRGDIRY--------------------
>UniRef50_C1TRW2(93-257:305) Pseudouridine synthase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRW2_9BACT  E=1e-07 s/c=0.36 id=25% cov=57%
--------------------------------------------------------------------------VNRLDRNTSGIMVLALTGESLRDLSSrwRDGEMEKVYLALVVGDLPEE---GSIDAPLSKDGSSNKVFVDSKGQSSLTLYR----RLASGGGLSLCLVTLITGRSHQIRVHMSHIGHPV--LGDVKYGDRALNG-----------
>UniRef50_Q04HA3(83-252:302) Pseudouridine synthase n=2 Tax=Oenococcus oeni RepID=Q04HA3_OENOB   E=1e-07 s/c=0.35 id=23% cov=50%
----------------------------------------------------------------------------RIDRDTSGVVIIAKNplavGILDQLLA--KKRIKRTYLAWVSGNL-ENKKGSIDQAIAVD--PINP--YKRIVDQAGQKAVTHWTKIHTVYQNTLVRVSLETGRTHQIRVHFAAIGHP---------------------------
>UniRef50_Q4UDJ7(31-232:238) Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UDJ7_THEAN  E=1e-07 s/c=0.29 id=19% cov=70%
-----------------------------------------VLLHKPYGYMSTYSKNSQKwsknllikenrsdndiQTGLEPCKLNKIVPISPLEVKCSGLLIYSQDKSLFNKFSD----CEEEFYVVFKDKVTDYKLRFLTGEIFLDGCSVGHVLVKDHSEKSASISFK--------------------GSSVKLRKICLLAGLEIKTLKRTRISNIKLGSLSLGEWRLI--
>UniRef50_Q47417(125-298:376) tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC  E=1e-07 s/c=0.34 id=30% cov=54%
---------------------------------------------------------------------QHVYTVHRLDRPTSGVLLLALSSEVARALSQqfESHQMQKTYHAVVrgyvldDGVIDYALTEELDK---IADKFTNPDKApqPAVTHYRSLAQAEMPVAIGR-YPTarySLMELKPQTGRKHQLRRHMSHIHHP---------------------------
>UniRef50_C5DCE4(122-288:397) KLTH0B02376p n=2 Tax=Saccharomycetaceae RepID=C5DCE4_LACTC   E=1e-07 s/c=0.35 id=25% cov=55%
-----------------------------------------------------------------------VFPSHRLDKITSGVLILTKNPHMANKIQHqiRQRTMSKIYLARVDGAFPMADTLGSLTPFESPDKTqTVDSAIYTVELKKQFPAAFSPPREAKTkfyplkyYPKSDETLVACQpitGRTHQIRIHLARLGHP---------------------------
>UniRef50_Q0F3G4(103-260:315) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G4_9PROT  E=2e-07 s/c=0.37 id=28% cov=55%
----------------------------------------------------------------------DLRLAHRLDRDTSGVLLMAKHLDALRRLTEsfRERDMQKTYFALIAGHPYAHAGRmssNLAKGV-VRGGERMVVDSE--EGKASVTDYQVMIEyERHGFPYAMVALNPHSGRTHQLRVQLQHEGHPIL-------------------------
>UniRef50_A5FWV1(9-166:224) Pseudouridine synthase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWV1_ACICJ  E=2e-07 s/c=0.37 id=33% cov=49%
----------------------------------------------------------------------------RLDADTAGCLAIarrkTTLVALQRAFAQ--RRVGKTYWAIVEGVP------AAAHGtIELAlARRTVPGGWRVAPDPRGDPAITDWRCLAAGQGRALLELRPRTGRTHQLRVHCAESGFP---------------------------
>UniRef50_B2S2H8(12-158:216) Pseudouridine synthase n=2 Tax=Treponema pallidum RepID=B2S2H8_TREPS  E=2e-07 s/c=0.39 id=22% cov=51%
-----------------------------------------------------------------------LFPLHRLDKDTAGVLLFAKHARAAALYqgILGSMRVIKRYRALCFGRPPRECGD-IRVPIRTGTAARRRQVVR--------AAHTAYRVLRATDTHTYLELTLHSGRTHQIRIHLAALGCP---------------------------
>UniRef50_Q2LWV4(90-254:333) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWV4_SYNAS  E=3e-07 s/c=0.35 id=30% cov=51%
----------------------------------------------------------------------------RLDKDTSGLLVVakTDAAHQGLALQFKKHQVGKTYQALVYGDPREKTGQiDLPVGRHPVERKKMSTKSRRGKEAATRW----RIAERFGVAT-LLNVDIVTGRTHQIRVHLAAIGHP---------------------------
>UniRef50_A1U2H1(14-178:245) Pseudouridine synthase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2H1_MARAV  E=3e-07 s/c=0.35 id=25% cov=52%
---------------------------------------------------------------------EHVYPVHRLDRPTSGVLLFARDPETARALGLAmmAGAVSKTYLAMVRGwapeqgvidhplreEPEDRRLKGQEQPVREALTRYRRLA---TTELPVAIERYPTSRY------SLVELKPETGRKHQLRRHMKHINHP---------------------------
>UniRef50_A8SPE4(60-270:334) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A8SPE4_9FIRM   E=3e-07 s/c=0.27 id=24% cov=85%
--QLYLADDTIDSFRDDNIQTAASGSQKKFKPEIIYHDHNVLIVNKPVGVLSQKASKDDYSineSVLDYLLDNGYitseqlrtykpSICNRLDRNTSGLVLcgvsLMGNQELSRII--RERNIDKYYYTIVKGHIKsvQDVTAYLVKDekkntVIVRDGVDEIKQDSGKNEFEKIHTIFEPVRSNGKY--TEVKVKLITGKTHQIRAQLSHMGYP---------------------------
>UniRef50_C9M5C8(54-209:276) Pseudouridine synthase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5C8_9BACT  E=3e-07 s/c=0.37 id=28% cov=65%
----------------------------------------VLVINKPAGLLSQ-PDTKGEDSVATralgyaSDPAFGAQLVHRLDRNTSGVMILALDGQALRSLMVCFKERTanKTYLALVSGqlPPSGQI-----------DAPLLKDPDKKLVRVASNGERAVTRFRRLATDGqfSLAEVEILTGRTHQIRVHMNHIGHPIL-------------------------
>UniRef50_Q3A3D8(55-238:301) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=Q3A3D8_PELCD  E=4e-07 s/c=0.31 id=22% cov=54%
----------------------------------------------------------------------------RLDRDTSGVMIFSIHARAHKSLSDifAARRVQKHYLALVAGCM--QAPQGEFRSLLARQHRTNLMKSVARGGKEAVTRYRVIEKFGDAE---LLEVEIPTGRSHQIRVHFAEAGHPLLGDIRY--------------------
>UniRef50_D2RJW8(83-235:285) Pseudouridine synthase, RluA family n=2 Tax=Acidaminococcus RepID=D2RJW8_ACIFE  E=4e-07 s/c=0.37 id=26% cov=53%
-----------------------------------------------------------------------VHPVSRLDRETSGVVLFAKNACLHHMLS--RNRLEKTYLALTLGHWEQPA------GILDWPIGRRPGSiVERQVDPDGQPARTRYQVLGEKEGLSLVRFQLETGRTHQIRVHAAAAGHPLL-------------------------
>UniRef50_Q0F2T6(66-253:291) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2T6_9PROT  E=4e-07 s/c=0.30 id=22% cov=68%
----------------------------------------LYLIHKKSGQYAQEALHRSRGTLPDELARHleltpaqasELRPVHRLDRDTSGLMLFSASAAMLQHLqAHWHDAVEKRYLAVVSPAPDWDD-QRIRLAI---DRNRDAHGRYHLSPDGRACDSEAHVVERRD-NRALVELVPHTGRSHQLRVHLSALGCPIL-------------------------
>UniRef50_D1AMK0(96-245:285) Pseudouridine synthase, RluA family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMK0_SEBTE  E=5e-07 s/c=0.38 id=27% cov=51%
--------------------------------------------------------------------------ANRIDKETKGLLLGAKNLKFLRYLTEkiRNNELEKRYIAVVSGIITEDEF-------TIDNFLETKENKVVVSDKENGKAAKAVFKKIKTIKNkyTVLEVELITGRKHQIRVQLADMGFP---------------------------
>UniRef50_B8CWB7(98-259:310) Pseudouridine synthase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWB7_HALOH  E=5e-07 s/c=0.35 id=23% cov=54%
-----------------------------------------------------------------------VRPIHRLDRNTTGLLLIAKNQYAHNYITHqfQNNNIHREYLAFVHGNVEFKK-ESINAPI----GKTRDSLIKRKVDHTLGKRAVTHIKvVKPGGLISLIRVKLETGRTHQIRVHLSHLGHPLL-------------------------
>UniRef50_C6CWL6(94-256:316) Pseudouridine synthase n=2 Tax=Paenibacillus RepID=C6CWL6_PAESJ   E=6e-07 s/c=0.35 id=27% cov=51%
------------------------------------------------------------------------RPVHRLDEDTSGLVVIAKNPYIHQQLSEQLQAgtIMKIYCAYVYGTPSPADGTV---GAPIDRNPEDP-HVRIVTPEGY-----PSVTHYKTAAvfgggqASKVRLKLETGRTHQIRVHMKHIGCP---------------------------
>UniRef50_B4D302(59-242:289) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D302_9BACT  E=6e-07 s/c=0.31 id=23% cov=66%
----------------------------------------LLVIDKPPDLLTIASEAEQEKTVYfqlteylrgnDVHSRERVWIVHRLDRETSGIMVFAKTPQAKGLLQTGWDKAEKRYQAVIEGSLPND------KG-TFRSYLDETDPFRVISVPRTPTTRHAVTHYRvlkRGKGRTLVELTLETGRRHQIRVHLADAGCP---------------------------
>UniRef50_B5JG19(26-181:262) RNA pseudouridine synthase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG19_9BACT  E=7e-07 s/c=0.36 id=23% cov=38%
----------------------------------------VLLINKPALLVCHPSKNGPWSSLAgacrEYLQSERSHLVSRLDRETSGIVLFAKH-RLKSRhlqMALEQRKVSKTYLAILEGELKEETL-----------------------------------------------------------------------------------------------
>UniRef50_A8IAL9(124-327:384) Pseudouridine synthase n=2 Tax=Xanthobacteraceae RepID=A8IAL9_AZOC5   E=8e-07 s/c=0.28 id=24% cov=69%
----------------------------------------VLVLNKPSGIAVQGGSGTFRHIdgmLDALRAKDGQKPrlVHRIDKDTAGCLLIAKNRLSAAQLAKnfRSREARKIYWALVPGVPKPRQ-GRISTYLAREEAEERMRVARHGEEDASHAVTYYAVVEHAAQKMSWLSLKPVTGRTHQIRAHLAHIHHP---------------------------
>UniRef50_D1B8F2(92-250:302) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B8F2_THEAS  E=8e-07 s/c=0.35 id=27% cov=54%
-------------------------------------------------------------------------PSHRLDVNTTGVVLVPLDGALgreLHRLFR-EGTIRKLYWALVRGTCVGEALVDLPLSKDGRGNVT--------PSPSGQPARSVVRPLAVRGGFSLVEVELLTGRQHQARVHLAHLGLPILGDVRYGV------------------
>UniRef50_A6NQQ9(93-247:300) Pseudouridine synthase n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQQ9_9BACE  E=8e-07 s/c=0.36 id=30% cov=50%
----------------------------------------------------------------------DFHPVHRLDRGTSGLLLVALHGHaqevLKEQLHSPSFR--RVYLAVCEGAPNppsgviDAPIGRLEGSVLAR--TVRPDGQRAVTHYRTL---------RTVNDRALVRLELETGRTHQIRVHMAHLGHP---------------------------
>UniRef50_A6TSZ4(71-251:308) Pseudouridine synthase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSZ4_ALKMQ  E=8e-07 s/c=0.31 id=26% cov=68%
----------------------------------------VIVINKEPGIVSHPTKSHPKDTIAnaaqNYLEKKGVacriRFVNRLDMDTSGLLVIAKNPYTHHIMSQqmKANEITKKYVAFVKGVVVAN--EGEIDGAIYR--SSDETIKRVVDDRGQQSLTKFTVLERYADATM-LEVSLLTGRTHQIRVHMESIGHPML-------------------------
>UniRef50_B2IK20(87-271:350) Pseudouridine synthase n=2 Tax=Beijerinckiaceae RepID=B2IK20_BEII9   E=8e-07 s/c=0.30 id=29% cov=53%
----------------------------------------------------------------------------RLDRDTSGVLLVAKTRRMAAELGEifRSRQARKIYWAVVEGVPKPAQGRislYLAKGEGMEDKRgphgrdaEARAGLEKMrvakhgEEDARHSVTYYAIVDKVPSRLAWLSMKPITGRTHQLRAHAEAIGHP---------------------------
>UniRef50_B9L028(97-255:322) Pseudouridine synthase n=2 Tax=Thermomicrobia (class) RepID=B9L028_THERP  E=9e-07 s/c=0.35 id=29% cov=49%
----------------------------------------------------------------------------RLDKDTSGLLVVakTEAARLALLEQWQSRSVVKKYTALVHGVVEPDS------GTI--DAPISRDPVERTKMAVVSWGRPAITHFRvleRFRCATLLDVTIETGRTHQIRVHCAFIGHP---------------------------
>UniRef50_B0PDX0(90-241:292) Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX0_9FIRM  E=9e-07 s/c=0.37 id=28% cov=51%
--------------------------------------------------------------------------VGRLDRDTSGAVVIAKNARAAAVLT---GHVEKQYIALVTGMPNPKH-GVIDAPIGQPDRKN-PRRMIVANGKPAVTEYETQIRCEGY---SVVHCVLRTGRTHQIRVHMASIGCPLL-------------------------
>UniRef50_Q03EW7(14-194:253) Pseudouridine synthase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EW7_PEDPA  E=1e-06 s/c=0.31 id=23% cov=52%
-----------------------------------------------------------------------VHVVTRLDQDTSGLVIFAKH-RFAHTVMDqdlRQRKINKMYLTIVEGTFTN------QHGIIETPIQRDPDSFikRMVAPMGEGKPSLTEYWVEDTFKNfTLLKVKLHSGRTHQIRVHFSSIGHP---------------------------
>UniRef50_C8PZW5(12-222:266) Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZW5_9GAMM  E=1e-06 s/c=0.26 id=32% cov=55%
-----------------------------------------------------------------------VYPIHRLDRPTSGVLLFALSSESARQLCEqfENRQVQKSYLAIVRGYLTVNAqtsglidypltqildkigdkpsLQALqQRKVSSTDMfaeaLSSPAELTLLQPAQTHWQclatTEQPFQARARYPTsrfSLARLTPITGRKHQLRRHMKHVFHP---------------------------
>UniRef50_B5YKV0(87-250:315) Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKV0_THEYD  E=1e-06 s/c=0.34 id=21% cov=51%
----------------------------------------------------------------------------RLDKDTSGVMVVALDDETYYKLVEAfkKREIKKEYLALVYGQLRGSGKITTPVGRAIYDRKKMSIKSKKAKEAITEWE-----VIKNFKNYTFLKVKILTGRTHQIRVHFSSIGHP---------------------------
>UniRef50_Q31EX3(109-264:300) Pseudouridine synthase Rlu family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EX3_THICR  E=1e-06 s/c=0.35 id=27% cov=59%
--------------------------------------------YKPKGVLSQGSKWGDHTTLNRWIETHYLfkeppekrpcWIVHRLDKATDGLILIAHNKKSAQMLARRfeAHQIGKSYQAWVKGKfgETERVFDQ-----DVNGKTALSKAHQLV--------------YNSDNDCSLVQVTIATGRKHQIRIHLSKAGFP---------------------------
>UniRef50_Q21ST9(44-256:262) RNA-binding S4 n=15 Tax=Proteobacteria RepID=Q21ST9_RHOFD   E=1e-06 s/c=0.26 id=20% cov=57%
-----------------------------------------------------------------------------LETAASGLVVFTQDWRVLRKLTEDAQLMEQEVIVEVAGEVPAQSLQRINQGLAVDGQPLPAVKVSLNS------TGETSSKLRFALKGSHPGLIAY---------LCERLGLQIVSMKRLRIGRVSMTQLPLGQWRYL--
>UniRef50_A4J9H9(111-267:320) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A4J9H9_DESRM   E=1e-06 s/c=0.35 id=27% cov=66%
----------------------------------------LLVLNKPAHQLVHPTGQTTRGTMANYLAyylkqrnvVSAIRPVHRLDRETSGCVIFAKDSRSQFILEQQLKERTlkRTYWALVKGIvhPPSGTIDA-----PIGPHPSLANRRAINEHGEQSITHYQTLRSFPEI--SLLKLNLDTGRTHQIRLHLAHLGYP---------------------------
>UniRef50_B7CDE6(91-255:295) Pseudouridine synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDE6_9FIRM  E=1e-06 s/c=0.34 id=25% cov=69%
----------------------------------------ILIVNKPYGLLSQSDQSQNQDCLVnrvqaylmeknEYDPNKEHSFApsicHRLDRNTTGLVIAAKNANALRKVNEaiANRTIQKMYRAHVVGTFEQKDF-TMCYYIRKENTIAKVSDKKLEGYQKALMDVHV---ERDDGENSICTITLHTGRFHQIRALMGHIQHPLL-------------------------
>UniRef50_C0QPR5(79-278:319) Pseudouridine synthase n=4 Tax=Hydrogenothermaceae RepID=C0QPR5_PERMH  E=2e-06 s/c=0.28 id=24% cov=51%
----------------------------------------------------------------------------RLDKDTAGLMIIAKS-EFAHKELQKQFQertVDKRYIAVVTGIVQNDhGFIDLPIGRSIYNRKKMGTEATNLRD--ALTEYWVKNRSEKE-NLTVVDIKLHTGRTHQIRVHFSAIGHP---------------------------
>UniRef50_D2QPA6(16-179:244) Pseudouridine synthase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPA6_9SPHI  E=2e-06 s/c=0.33 id=28% cov=68%
------------------------------------QDTELVAINKPHGLLVHRSmiasdaSEFAVQLLRDQL-GQRVYPVHRLDRKTAGVLLFalseSMNAIMQQQFMEGA--VQKTYLAIVRGyTPDELTIDyPLCKD---DGNGAVGVLQEAVTHLKTLRQTEIPVAFGKH-PTsrySLVELTPTTGRMHQLRRHMAHILHP---------------------------
>UniRef50_A9KNX9(77-292:346) Pseudouridine synthase n=21 Tax=Bacteria RepID=A9KNX9_CLOPH   E=2e-06 s/c=0.25 id=23% cov=83%
--RLFLAEETIESFK-ESYQLDAKVNQRAVKLDVLYEDSHVVIINKPIGMLSQRAKESDVSLVELLIAyllemgsltKEELSTfkpsvCNRLDRNTSGIVIagksLLGLQEMSAKLQDRSLH--KYYRCIVKGTMTKGAR---INGYLAKDEKTNKVRITTNDpndgESSYIETEYQPILSKNGY--TLLEVLLITGKTHQIRAHLSSIGHP---------------------------
>UniRef50_Q2G4F0(112-268:436) Pseudouridine synthase n=12 Tax=Alphaproteobacteria RepID=Q2G4F0_NOVAD  E=2e-06 s/c=0.35 id=25% cov=67%
-----------------------------------------IVLNKPPGLATQggsGTHEHVDGLLDAYVNEGEARPrlVHRLDKDTSGVLLIARTPGSAAFFSK-RFSCrsaRKIYWALVVGVPDVKD--GLIE-LPLAKQPGTGGEKMMVDESGQGQSARSRYRviSRAGNAAAWVELQPLTGRTHQLRVHMAAIGHP---------------------------
>UniRef50_A3VN52(104-274:324) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN52_9PROT  E=2e-06 s/c=0.32 id=25% cov=59%
----------------------------------------------------------------------------RLDRDTGGVLLLAKSRAVAATLSLAfqQHRIGKTYWAITKGVP-----HPLFGRIDMRIEKAGEPGREKMrgTEQGQSALTDYQTVETAGQKAAFLALRPHTGRTHQIRVHLSAIGTPIVGDRKYGGAGAVLEGLP---------
>UniRef50_Q7Z110(80-257:350) Chromosome undetermined scaffold_37, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=Q7Z110_PARTE  E=2e-06 s/c=0.31 id=24% cov=62%
---------------------------------------QIIILNKKHGYASQGgaNPNYNIPEILNLYF-KNFYIIHRLDQLTSGLLIIAKNKDIATEIStiiQEKAFITKKYIAVVQGQI------KVQKGLI--DRPllfnTNNQKQTCYNEEQLLEGKYLPARTSYEVIEeyqyqdemySILDLQIFEGRKHQIR------------------------------------
>UniRef50_A0LBW6(20-174:224) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBW6_MAGSM  E=2e-06 s/c=0.35 id=31% cov=35%
----------------------------------------LLIFNKP-NRMPIYRGPGGGETLADHLPqlcfERGKPPAAvhRLDSATSGCLVLGRHKGMRRSLSNlfAQGGVEKLYWAVVQGRP----------------------------------------------------------------------------------------------------
>UniRef50_Q8DBG5(7-176:245) tRNA pseudouridine synthase C n=54 Tax=Gammaproteobacteria RepID=TRUC_VIBVU  E=2e-06 s/c=0.32 id=24% cov=59%
------------------------------------------------------------QTLRDQI-GQHVFPLHRLDRPTSGVLVFALSSEVASQVmpMFAGQEMSKTYHAIVRGWIEEEGELDYALKVEL-DKIADKFASQEKEAQDAITLYKPLAKVEVPYSTSKfpttryglMELKPKTGRKHQLRRHMAHLRHP---------------------------
>UniRef50_A0YGE0(24-177:221) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGE0_9GAMM  E=2e-06 s/c=0.35 id=26% cov=54%
----------------------------------------------------------------------DARIVHRLDMDTSGIMVLALSADSHRALSQlfAERKIIKEYEANVYGTIIDD--HRLIDLPLLCDWPNRPrQKVDFHHGKNA----QTWVERVSQHPDGWTRVLLKpvTGRSHQLRVHLAEIGHPIL-------------------------
>UniRef50_C0GQU7(80-247:318) Pseudouridine synthase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQU7_9DELT  E=2e-06 s/c=0.32 id=25% cov=49%
----------------------------------------------------------------------------RLDKETSGLLLAAKNYAWLRRIqaMWNKNLVEKTYLAWVHGSWPSR---------WVNLEHRLIKTFEKMQPSPEGRPALSRVRSIASSRDkTLVQIRIITGRTHQIRTQLSLSGHP---------------------------
>UniRef50_UPI0001903DB3(23-197:303) RNA-pseudouridine synthase protein, ribosomal large subunit C n=1 Tax=Rhizobium etli 8C-3 RepID=UPI0001903DB3  E=3e-06 s/c=0.31 id=30% cov=36%
---------------------------------------KVIVLNKPPGIAVQGGSGVARhidQMLEAWTSPKGEKPrlVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDtkKTYWALVKGVP----------------------------------------------------------------------------------------------------
>UniRef50_B7GLK3(85-243:292) Pseudouridine synthase n=11 Tax=Bacillaceae RepID=B7GLK3_ANOFW   E=3e-06 s/c=0.34 id=24% cov=51%
-----------------------------------------------------------------------VHVVTRLDRDTSGLVLVAKHRHVHHLLSEQQKQgrVKRRYEAvchgYVIQLVGTIDAPIGRKGDSIIEREVRLDGQRAVTHYEVLQQKNE---------MTHVSIQLETGRTHQIRVHFSHIGHP---------------------------
>UniRef50_C0WQF4(126-243:297) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=C0WQF4_LACBU   E=3e-06 s/c=0.46 id=22% cov=53%
-----------------------------------------------------------------------IHIVTRLDKDTSGLVIFAKH-HFAHSVLDkqlKDHQIKKTYLAIVEGTFSTTHFE-IYLPIKRADGSLVK---RQVGFPGKMSITEAWTKQRL-RQHTLLKLQIHTGRTHQIRVHMTAIGHP---------------------------
>UniRef50_A6DK57(4-163:218) Ribosomal large subunit pseudouridine synthase, RluD subfamily protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK57_9BACT  E=3e-06 s/c=0.34 id=23% cov=66%
----------------------------------------LLVLNKPYDLPSTGRKLDDDDCLQYWLIQRQgamVWAVHQLDADTSGINLFVTEKKLVKyyKELLEQAQADKQYLAIVHGVPSWKQCE--EHG---RIGKVDARSLGIHAEGKTAHSHFEVIGSVKDF--SLIKVKIFTGRTHQIRIHLSHLGHP---------------------------
>UniRef50_Q6MEZ4(1-194:243) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEZ4_PARUW  E=3e-06 s/c=0.28 id=23% cov=65%
------------------------------------------IIYKPSGLLSVATAfekgETTHALLKAHYKPRKVFVVHRLDQDTSGVMVFAFNEKTCNGLKDlfEVHDISRSYTAIVEG-------QLLSPSGTWKSYLYEDSQYFVHETEDETYGRLAITHYRtlkTLKKYSLVELTLETGRKNQIRVHCQSAGHP---------------------------
>UniRef50_B0S254(82-239:273) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S254_FINM2   E=4e-06 s/c=0.34 id=31% cov=24%
----------------------------------------------------------------------------RLDQDTSGVVMVAKNKIAQAYYQKNSFK--KKYLAIVKGNPKDQKIElnLKRDGI----------------------------------------------------------------------------------------
>UniRef50_Q73K15(11-172:244) RNA pseudouridylate synthase family protein n=1 Tax=Treponema denticola RepID=Q73K15_TREDE  E=4e-06 s/c=0.33 id=27% cov=23%
-----------------------------------------------------------------------IYPVHRLDKETSGLIIYALNAE-AHKTLNDDFqnrKIEKIYHAVSAGIPQEE-------------------------------------------------------------------------------------------------
>UniRef50_D1Y726(94-245:315) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y726_9BACT  E=4e-06 s/c=0.35 id=28% cov=50%
----------------------------------------------------------------------------RLDRNTSGVMALALDGPTTRALMEcfKARRADKRYWAIVIGELPERG--------RIDVPLLKDADKKLVRvDPKGERAVTEYKRLTSSGAFSLAEVHLLTGRTHQIRVHMNHVGHPLL-------------------------
>UniRef50_Q30SZ1(11-195:241) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q30SZ1_SULDN   E=4e-06 s/c=0.29 id=22% cov=56%
-----------------------------------------------------------------------VYPIHRLDKPTSGVLLFALDKESAKIMGEKfmAHEAKKSYIAVVRGYTLQSgeidyALSIKFDKIADKDSSSDKEPQEALTHYKRLATVELDFEVGKYDKTRYSLVKLNplTGRKHQLRRHMKHISHHIL-------------------------
>UniRef50_B3E6K8(63-250:300) Pseudouridine synthase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6K8_GEOLS  E=4e-06 s/c=0.29 id=28% cov=55%
------------------------------------------------------------------------YPVNRLDRGTSGVVLLatssSNAGILGRQVK--EEGLDKIYLTVVEGML--EGIGEISQPL---DGKESISRYRSLS---------------VGESCSFLLVEPVTGRTHQIRRHLSAIGHPVLGDKRYDAQPLaTLPGIALHSFR----
>UniRef50_D2BIX0(85-247:302) Pseudouridine synthase n=5 Tax=Dehalococcoides RepID=D2BIX0_DEHSV   E=4e-06 s/c=0.33 id=28% cov=55%
----------------------------------------------------------------DFDDPLRPGIVHRLDKDTSGLLLVAKNREtLANLSAQFKERTVRKYYLTlVKGElhPAEGFIEA-----PLGRDPQNRQKIAVVSNGRHARTGYKVLRYIQGY--SLLEVKLETGRTHQIRVHFAAIGHP---------------------------
>UniRef50_UPI00016B2413(146-342:379) ribosomal large subunit pseudouridine synthase, RluD subfamily protein n=3 Tax=candidate division TM7 RepID=UPI00016B2413  E=4e-06 s/c=0.27 id=30% cov=35%
----------------------------------------IIVINKPAGMLThakgaiaeEFTAADIVKPITNYkadTNRPGI--IHRLDRNTSGVLLMVKNSDAASKIQKqfSQRTVKKTYYAIVCGIP----------------------------------------------------------------------------------------------------
>UniRef50_A1K5H7(11-176:260) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=A1K5H7_AZOSB   E=5e-06 s/c=0.32 id=28% cov=53%
----------------------------------------------------------------------HVHPVHRLDKGTSGVLVFALDRDTAGRLATqfETRAVRKQYVAIVRGHPAEA-------GTIDHPLSRRFDPVEHVAEDKVFAPQPAITRFRRlataelpwavdRYPTSryaLLALEPETGRRHQIRRHLKHISHP---------------------------
>UniRef50_P54604(93-248:302) Uncharacterized RNA pseudouridine synthase yhcT n=5 Tax=Bacillus RepID=YHCT_BACSU  E=5e-06 s/c=0.34 id=20% cov=52%
-----------------------------------------------------------------------VRHVHRLDQDTSGAIVFAKH-RLAHAILDqqlEKKTLKRTYTAIAEGKL------RTKKGTinsPIGRDRSHPTRRRVSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRVHLASLGHP---------------------------
>UniRef50_A5VJ18(87-245:301) Pseudouridine synthase, RluA family n=13 Tax=Lactobacillus RepID=A5VJ18_LACRD  E=5e-06 s/c=0.34 id=24% cov=52%
------------------------------------------------------------------------HVATRLDRDTSGLVVFPKH-RFAHAVLDeqlKKHLVKKNYLALIKGKVPAE------HGYIDAPIQRDPnSFVKRMVGKEGKASVTEYWRQECNVQASLIKIRLHTGRTHQIRVHFASLGFP---------------------------
>UniRef50_A1WTN6(2-178:249) Pseudouridine synthase n=2 Tax=Ectothiorhodospiraceae RepID=A1WTN6_HALHL  E=5e-06 s/c=0.30 id=25% cov=55%
-----------------------------------------------------------------------VYPVHRLDRATAGVLVFGLDPDAASVLAAAfrEQRIGKRYQAVVRG--WVEAPGRIDRPLGAGRRGEGGAPQPAVTDYVPLAWTELPIPVSRYDTARFTRLALHpqTGRQHQLRRHMKAISHPIL-------------------------
>UniRef50_C3RIE2(61-243:294) Pseudouridine synthase n=4 Tax=Bacteria RepID=C3RIE2_9MOLU   E=6e-06 s/c=0.29 id=27% cov=27%
----------------------------------------LIVINKPAGLLSMAGGNEKEKTayhlVGEYLKSKnknaRVFIVHRLDKETSGVLLFAKNEIIKNKL-----------------------------------------------------------------------------------------------------------------------
>UniRef50_Q317H5(105-272:332) Pseudouridine synthase n=2 Tax=Desulfovibrio RepID=Q317H5_DESDG   E=6e-06 s/c=0.32 id=30% cov=53%
-------------------------------------------------------------------------PAHRLDKNTSGLLLAgTTYTALrtLQDLFRNGHSLIKDYCAWVCGIWPEQEALTLTD-VLVKEGT--PGKEKIHALPAgSAQPHTAPPKGREALcqvvpllrldNATLLGIRLATGRTHQIRVQLASRNHP---------------------------
>UniRef50_D0MHX3(16-189:242) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHX3_RHOM4  E=6e-06 s/c=0.31 id=30% cov=56%
----------------------------------------------------------------------------RLDAPVSGVMVLARTSKAAARLMQqfRERTVEKVYLALVEGELegsgtWEDFIAPARDHMRLV-PEDHPFGKRAVLHWQALMTRNGL---------TLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRARRW----LAPGQ------
>UniRef50_C7LR44(25-181:243) Pseudouridine synthase n=6 Tax=Bacteria RepID=C7LR44_DESBD   E=6e-06 s/c=0.34 id=27% cov=66%
----------------------------------------IIVVNKPAGMLTMATETEKTRTayyaLTDYVrkgnakSRYRIFIVHRLDRETSGIVLFAKTEVAKRTLQDQWEDTTKIYAAVVHGQMGKAsgmlSSHLVESGVH-KVYATRDAALGKLARTAWTV-----LKERGGY--SLLDVTLLTGRKHQIRVQMADAGHP---------------------------
>UniRef50_C5VRN0(92-247:302) Pseudouridine synthase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VRN0_CLOBO  E=6e-06 s/c=0.34 id=24% cov=53%
-----------------------------------------------------------------------VRLVNRLDMDTSGLVLIAKN-AYSHMALSRDMQKDdfvKKYLAIVHGNFNEDS-GVIDKPIYRVGEGTLK---RIIDERGQRSITLFKV-IEQYKNASLVELTLETGRTHQIRVHLSSIGHP---------------------------
>UniRef50_C3XMA2(90-249:290) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XMA2_9HELI   E=6e-06 s/c=0.33 id=22% cov=51%
----------------------------------------------------------------------------RLDKETSGILLLVKENSSFHLKAKEAFKqlqVLKQYTAIVEGILDEEC--EITAPLIIKKGKSAKVSISKTNEgQKAITHITPLEIFGKK---TKLDIEIKTGKTHQIRAHLAHIKHP---------------------------
>UniRef50_D0LUH1(76-242:303) Pseudouridine synthase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUH1_HALO1  E=7e-06 s/c=0.32 id=25% cov=62%
----------------------------------------LVVVDKPAGLLSAPTPESDLGNLAALLRErrERVYVVHRIDLQTSGLLVFAKTRRANQHLSErfREHQIERAYTAVVAGAPVEDTF-----------TIDLPLRGRRATTHLQVLQR---IGERAAVLDARLET----GRTHQIRLHCLQRGYPVL-------------------------
>UniRef50_C0QC81(114-240:295) Pseudouridine synthase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC81_DESAH  E=8e-06 s/c=0.42 id=22% cov=53%
----------------------------------------------------------------------QIHPVHRLDQETSGLILVATDPDRLRYLSNlfQQGAVQKHYIALVHGNFDPP-----CDPFQVWDTPLSKQAGGRTDPRGKGKRVRSETRYRimDQSPHyTLLEIELVTGRKHQIRRHAKLAGHP---------------------------
>UniRef50_Q5Z213(2-185:260) Pseudouridine synthase n=2 Tax=Actinomycetales RepID=Q5Z213_NOCFA   E=8e-06 s/c=0.29 id=24% cov=54%
---------------------------------------------------------------------ERLFPVHRIDKVTSGLVLLAKDlaahGTLTRQFT--KRTAEKAYLAVVagGGLPDRGVIElplsvgrknrvriaAPRESIRAEDGRWFVDDADLLAVKNY-PSRTEFVTLARTADRTVLALRPVTGRRHQIRVHLAWIGH----------------------------
>UniRef50_A5ZUU7(62-244:293) Pseudouridine synthase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUU7_9FIRM  E=8e-06 s/c=0.29 id=29% cov=59%
----------------------------------------ILVVNKPADM-------PVHPSLGNYTNTlaNGVAAyletkgescpfrcINRLDRDTSGALILAKNALSAAILSvqMRNRQISRTYLAVVEGIPrqsgtisapiSRAADSVIERRIDFENGESAITHYQLLEVKNN---------------HSLLEIHLETGRTHQIRVHMGYIGHP---------------------------
>UniRef50_C6D874(92-277:332) Pseudouridine synthase, RluA family n=2 Tax=Paenibacillus RepID=C6D874_PAESJ  E=8e-06 s/c=0.28 id=22% cov=66%
-----------------------------------------LVLNKPAGMPVHESHSGQTGTLdeaaarwlleqGDPLPVRHIH---RLDDDTSGPVLYSKN-DLAQWVLDeamREKRIDRRYLAVVQGKVKKSS-----GTVNAPIGKDRHHSSRRRVTPGGDLAITHYETIRAFSDATLVRLQLETGRTHQIRVHMSHLGHPLL-------------------------
>UniRef50_Q0IBH1(24-176:220) Pseudouridine synthase n=11 Tax=Cyanobacteria RepID=Q0IBH1_SYNS3   E=8e-06 s/c=0.34 id=29% cov=63%
---------------------------------------RFLVVEKPSGLLSQpgLGDSQSDSLITRLQAVrPELRLVHRLDRDTSGLLLLARDPESLKVLggLFAERKVHKFYAADVHGHPKSRS-----------GAVRLP-----LARLSAHPPRYGPRRDGRSCLTLWrcaqmgsdrsrLWLAPRTGRSHQLRAHLAAIGLP---------------------------
>UniRef50_B0K860(83-235:285) Pseudouridine synthase n=11 Tax=Thermoanaerobacterales RepID=B0K860_THEP3  E=8e-06 s/c=0.34 id=27% cov=66%
----------------------------------------ILIVNKPANMVVHPTKRYQSGTLANgvawYFKEKGLkaliRPVNRLDRGTSGLVVFAKRPFMQYYL-QIIKPMTKLYFAVVEGKMEGEG----RIDLPISRKPQSGIE-RMVSEEGDRAITNYKV-VKSSKRFSLLKVKIETGRTHQIRVHLSHIGHP---------------------------
>UniRef50_C1ZB48(91-268:325) Pseudouridine synthase, RluA family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB48_PLALI  E=8e-06 s/c=0.30 id=28% cov=50%
----------------------------------------------------------------------------RLDRDTSGAMAICKE-HLSHRLLSIQFQlgrISKSYLALVEGVLTDDQLV-----IDLPIGRAPGCSSALMScraDALEAQASKTSLRVVERFPqHTLVEAKPRTGRMHQIRIHLATIGFP---------------------------
>UniRef50_Q312A0(129-290:578) Pseudouridine synthase, RluD n=6 Tax=Bacteria RepID=Q312A0_DESDG   E=8e-06 s/c=0.32 id=29% cov=52%
----------------------------------------------------------------------------RIDKDTSGLLLiaLTEKARLALSDAFAGRRIHKEYLALVKGIPEGDSGEIDA---PVGRHPTHKTRMAVVRggREALSTWRVLLADPHGGGGTGWtlVAVRIHTGRTHQIRVHMQHTGHP---------------------------
>UniRef50_Q1Q689(96-261:335) Similar to ribosomal large subunit pseudouridine synthase D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q689_9BACT  E=9e-06 s/c=0.32 id=23% cov=51%
----------------------------------------------------------------------------RLDRDTSGVMLvIKSDAVHSHIAMQFEKRlVKKEYFAVVEGEVAFDS-NEINMPIGRHRVDRQKMAVRRDTGKNATSVYEVIERFRGY---TLVKIMPKTGRTHQIRVHMQAIGHP---------------------------
>UniRef50_Q5FSR8(51-206:265) Pseudouridine synthase n=1 Tax=Gluconobacter oxydans RepID=Q5FSR8_GLUOX  E=9e-06 s/c=0.34 id=26% cov=53%
--------------------------------------------------------------------------AHRLDADTSGCLLVARRKTAlieAQKAFQERQAH-KLYWAVVVGDLPQDSGEIDAPLLRQSDA----SGWRMVVDAKGDEARTRWRVLGRSKGLCWVELELLTGRTHQARIHCAELGTPIL-------------------------
>UniRef50_Q1MQF8(106-274:321) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q1MQF8_LAWIP   E=1e-05 s/c=0.31 id=26% cov=51%
-------------------------------------------------------------------------PVHRLDKDTSGLLLVAKTYNslryFSELFASHSTQLTKEYLAWVVGIcPWT-------QPICLEDILTKKQKQDNYSRLNSYQNKLQQTSAQKASLTvrcikqykdkSLLLIKLHTGRTHQIRIQLSIHGFP---------------------------
>UniRef50_B7VGV5(49-194:270) Pseudouridine synthase n=17 Tax=Gammaproteobacteria RepID=B7VGV5_VIBSL  E=1e-05 s/c=0.36 id=28% cov=23%
-----------------------------------------LLINKHPG-VSVHKDDGDTMLLQEVakaINEPKLYLVHRLDKMTSGILLLAKD------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A8ZXZ8(38-251:329) Pseudouridine synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXZ8_DESOH  E=1e-05 s/c=0.24 id=22% cov=63%
----------------------------------------LLVVNKPPGLVVHPAPGHEGGTLVNRLLhhFPAIGTVGepdrpgivhRLDRNTSGALVVAKTAAAHQALSDmfKSRQVRKTYLALVYGQMKST------GGVVTLpiGRHSLERKKMSVSSPQARPAETRWKVRKAFVDASLLELEIHTGRTHQIR------------------------------------
>UniRef50_C6C294(60-244:292) Pseudouridine synthase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C294_DESAD  E=1e-05 s/c=0.28 id=25% cov=53%
-------------------------------------------------------------------------PAHRLDRDTSGVILAGKSHQGQKDLSDFFAEHgegGKFYLAEVEGRWPEEDWVELHDKMEKSGSKGRE-KVVVGSGKDASSSVCPVTIGEKS---SLLIVKLHTGRTHQIRVQLSSRGFP---------------------------
>UniRef50_C0GNZ6(93-253:535) Pseudouridine synthase, RluA family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNZ6_9DELT  E=1e-05 s/c=0.32 id=24% cov=52%
----------------------------------------------------------------------------RLDKDTTGLMVAALNQEAKEDLAGqfAGRRVHKTYLALVCG-----ALKQDEGIINVPLARDQQSRARVAPSREGRSARTAYKVLKRDPSGLWslVQVQIFTGRTHQIRVHFSHLNHPVL-------------------------
>UniRef50_C0FY60(27-236:294) Pseudouridine synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FY60_9FIRM  E=1e-05 s/c=0.25 id=24% cov=86%
--KLFLSDETFEKFSGKdetNSGYMKLKSIDSGRLQVVYEDDDVIIINKPSGMLSQKavpEDISANEYILSYLIRKGAlseeqfktfkpSICNRLDRNTSGLLIAgkTLKGLQTMAEALKKRTVQKYYRCIVKGELREKTHL---KGYLSKDEQNNKVKVVSHIRPEEKADYLPIETEYRPVAVSngytELEVHLITGRSHQIRAHLASIGHP---------------------------
>UniRef50_A5CFM2(91-266:312) Pseudouridine synthase n=2 Tax=Orientia tsutsugamushi RepID=A5CFM2_ORITB  E=2e-05 s/c=0.29 id=27% cov=48%
----------------------------------------------------------------------------RLDRETTGLLIIAkNHGtaiKLSQAFLH--HSIEKEYIAILQGVPSQLSGEIITNITKTGDRMIETQnggKVSITKYQVKAISINSQLSLVSFIPVT--------GRTHQLRVHAAKIGYP---------------------------
>UniRef50_Q9ZMA1(33-234:293) Uncharacterized RNA pseudouridine synthase jhp_0321 n=14 Tax=Helicobacter RepID=Y347_HELPJ  E=2e-05 s/c=0.25 id=24% cov=21%
------------------------------------------VFDKPAQIYTHPKGYFYHESLLDCIqshFGKNAHPAHRLDYETSGLVL----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A0Q1S9(88-247:301) Pseudouridine synthase n=32 Tax=Clostridium RepID=A0Q1S9_CLONN   E=2e-05 s/c=0.32 id=23% cov=53%
-----------------------------------------------------------------------VRLVNRLDMDTSGLVLIAKN-AYSHMALSRDMQKDdfvKSYLAIVHGNLKEKS-GVINKPIYRVGEGTLR---RVIDERGQRSVTRFKVVESYEDAD-LVELTLETGRTHQIRVHLSSIGHP---------------------------
>UniRef50_B7PYG1(179-380:443) Ribosomal pseudouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PYG1_IXOSC  E=2e-05 s/c=0.25 id=25% cov=53%
-----------------------------------------------------------------------LYTVHRLDRDVTGVLLLARTQRMAdmlNSLFQ-KHQVSKTYLAitagvpdHLEGVIDMPLAEGEVEGAKrmVLNPKLDPEFQRLVPKFRKSFAAVTTYRVLASCgRAGYLELRPTTGVKHQLR---AHLG-----------------------------
>UniRef50_UPI000178A5E6(92-247:302) pseudouridine synthase, RluA family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A5E6  E=2e-05 s/c=0.33 id=25% cov=52%
----------------------------------------------------------------------------RLDKDTTGPVLYAKNEYAQLKLdeAMREKKIVRMYAAIVQGRVSQE-LKRIDLPIGKDRYHASRRRVSLTGQAAITHILSAEAYPKASL----LHIRLETGRTHQIRVHLSHMGHPLL-------------------------
>UniRef50_Q28US1(81-273:354) Pseudouridine synthase n=43 Tax=Rhodobacterales RepID=Q28US1_JANSC   E=2e-05 s/c=0.27 id=24% cov=69%
----------------------------------------IIAINKPAGLPTQggtgqsrHVDGLAEALKFGLEDKPRL--VHRLDKDTSGVLLMARTRMGAKALTDAfrLRSTRKIYWAAVAGSPLPRmgtiKLGLVKAPGHGRGGENEKMRAVPVDEIAQVdgakrAETDYAVMSNLGGRVCWCALVPITGRTHQLRAHMAEIGHP---------------------------
>UniRef50_C4GB89(60-267:337) Pseudouridine synthase n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB89_9FIRM  E=2e-05 s/c=0.25 id=27% cov=53%
--------------------------------------------------------------------------ANRLDRNTSGLILAGKTLRGQQYLSEqlRDRSVIKLYHTIVRGRLTEElQLDGyLYKDVGRNQVLVSEKKEDLPEGAQEIHTAYRPLDHRKDL--TLLEVHLMTGRSHQIRAHLASIGHP---------------------------
>UniRef50_C8PTH9(24-173:240) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTH9_9SPIO  E=2e-05 s/c=0.34 id=23% cov=53%
----------------------------------------------------------------------EIFPVHRLDKETSGLLVTakSADAARSCRALFESQAVEKEYLALCFGGFEPSAHKKPVKKLLPEGIIDTP-----VVENGSPKPASSAYKLLASTDAySLFSVRLHTGRMHQIRIHLAGIGYP---------------------------
>UniRef50_D1UAP7(56-246:289) Pseudouridine synthase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAP7_9DELT  E=2e-05 s/c=0.27 id=25% cov=33%
--------------------------------------------YKPGGVHSAAIAGKDGLSVEAALPAlfPDAAPVllNRLDFPTSGLLLvaLGPDGAETYRASEEAGGVRKFYLAVVHG------------------------------------------------------------------------------------------------------
>UniRef50_A9CFZ5(27-180:222) Pseudouridine synthase n=3 Tax=Rhizobiales RepID=A9CFZ5_AGRT5   E=3e-05 s/c=0.33 id=27% cov=52%
----------------------------------------------------------------------------RLDKDTSGIVLMSLNRKAHAAIAAqfEKRETRKSYVAIVWGTVAGEEGEvDLPLAIDPDNKPRHRVDHENGKPAQSLW----RVLERLPLPATRLALTPLTGRTHQLRVHMKALGHPIL-------------------------
>UniRef50_C8X3G8(96-243:285) Pseudouridine synthase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3G8_DESRD  E=3e-05 s/c=0.35 id=23% cov=51%
----------------------------------------------------------------------------RLDYPTSGLVLVAlSQGAFdQYQIWQDEGRVRKTYWAEIHGEWTGPELLKWR----IETAKRKRVAVVFEPDPDPLRWTHVRALYRIAPGRTRVEVVIAKGRRHHIRAHLAAAGTP---------------------------
>UniRef50_C3XDX0(117-235:279) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDX0_9HELI  E=3e-05 s/c=0.43 id=19% cov=50%
----------------------------------------------------------------------------RLDKDTSGVILLAKNEKMRQKAIQAfkQKEVEKMYFALIEGKVYEEI------NIEKKISTQKDSKAKSYVDNEGLYAQSIVTPLQTFTHTTLVSVQIPTGRTHQIRIHLKSIKHP---------------------------
>UniRef50_B8J173(85-251:525) Pseudouridine synthase, RluA family n=2 Tax=Desulfovibrio RepID=B8J173_DESDA  E=3e-05 s/c=0.30 id=32% cov=51%
----------------------------------------------------------------------------RLDKDTSGLLVvaLTEADCLALAAAFAERQVHKEYLALVSGLPPLEG--QCRE--PLGRHPT--AKIKMAVVPEDQGGRNAFTEWRRLWNTddgsvSLLAVRIHTGRTHQIRVHMTHLGYPLL-------------------------
>UniRef50_A0C2P1(106-267:469) Chromosome undetermined scaffold_145, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0C2P1_PARTE  E=4e-05 s/c=0.31 id=31% cov=21%
-----------------------------------------------------------------------LYVLHRLDRLTSGLLIFSKNRLLAQKFhdANSKLNVQKTYLARVQG------------------------------------------------------------------------------------------------------
>UniRef50_A6LIG6(100-255:304) Pseudouridine synthase n=5 Tax=Bacteroidales RepID=A6LIG6_PARD8   E=4e-05 s/c=0.33 id=28% cov=38%
----------------------------------------LIVINKREGLLSVSTDRIKERTayriLSDYLkecdPRNKIFVLHRLDRDTSGIMMFAKNQKVKEQLQSNWSEaiTQRTYVAVIEGRPEKDT------------------------------------------------------------------------------------------------
>UniRef50_B9E7W2(60-236:273) Ribosomal large subunit pseudouridine synthase homolog n=4 Tax=Staphylococcaceae RepID=B9E7W2_MACCJ  E=4e-05 s/c=0.28 id=20% cov=68%
----------------------------------------LAILVKPKGVKTHPNDMSESNTLLNHaiytLDSEYVEPIHRLDQETVGLLLVAKNPFIKKILdrMLEERLIKRTYRAKVKSHLP---LKHQTIDMPIGKDKFHPNK-RRVSQTGDRAVTHIVSSKANRDGTADVELQLETGRTHQIRVHLAEIGHP---------------------------
>UniRef50_A4BJ00(53-204:249) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BJ00_9GAMM  E=4e-05 s/c=0.33 id=29% cov=53%
-----------------------------------------------------------------------VHTVHRLDRPTSGLVVMCKDDHAAKALVEqfQEKTVNKRYWAICRGfAPVAETLdyplieehDRIADKFADSDKPAQEAITEFrrlgITELAIPVSRYPKMRL------SWMECVPVTGRKHQIRRHLKHLRYPIL-------------------------
>UniRef50_Q9LT72(156-364:477) RNA pseudourine synthase 4, mitochondrial n=2 Tax=rosids RepID=PUS4_ARATH  E=5e-05 s/c=0.24 id=30% cov=67%
----------------------------------------IIVLNKPHGLAVQggsgiktSIDELAASCLK-FDKSESPRLVHRLDRDCSGLLVLArtqtaatvlhsifrekTTGASAYGVKKNVKSLKRKYMALVIGCPPRQRGQisaPLRK-VVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHgyTWLELRPLTGRKHQLRVHCAEV------------------------------
>UniRef50_D1U4S9(155-273:596) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4S9_9DELT  E=5e-05 s/c=0.42 id=34% cov=48%
----------------------------------------------------------------------------RLDKDTSGLMVvaLTEGDRLRLAADFAGRRVRKVYLAVVLGRPAQPAgtidapmgrhpSQKTRMAVVARGGREAVSDYRVL----WTGPRGL---------ASLVAVRIHTGRTHQIRVHMAHIGHPLL-------------------------
>UniRef50_A0Z298(100-264:320) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z298_9GAMM  E=5e-05 s/c=0.30 id=30% cov=50%
----------------------------------------------------------------------------RLDRDTSGLLLVARRASTLRNLhvLLRSNGIDKRYLCLVNGR-WPAHLKRVDAPLE---KFALPSGERRVKVAATGRQSLTTFR----VVRRWSSATLVEakpvtGRTHQIRVHCQHAGFPIL-------------------------
>UniRef50_C4XWV4(139-310:432) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XWV4_CLAL4  E=5e-05 s/c=0.29 id=40% cov=21%
-----------------------------------------------------------------------VYPCHRLDKGTSGVLVLakTKTGKmLQEVLQNKKSHVEKWYVARVRG------------------------------------------------------------------------------------------------------
>UniRef50_C6JBH1(90-244:299) Pseudouridine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBH1_9FIRM  E=5e-05 s/c=0.32 id=22% cov=51%
----------------------------------------------------------------------------RLDRDTTGALILAKNPLSAAILSvqMKKRQILRTYLALVDGLLPDSG--TINAPIARMEGSVITREVNFGTGESAITHYE---RLAAGKEYSLAELHLETGRTHQIRVHMKYIGHP---------------------------
>UniRef50_B6G997(12-179:227) Pseudouridine synthase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G997_9ACTN  E=5e-05 s/c=0.30 id=25% cov=53%
----------------------------------------------------------------------------RLDRDTTGIVLFSLDKEAQpaFDRMIAERSIQKRYLAIVHGRFP--AAKTMCQPLGRDRHDSRRMRVSRTGKPAHTdAKRIAYAKADARAPErSLLAIDLHTGRKHQIRVHLAHAKFPLL-------------------------
>UniRef50_A8F4Z7(57-234:294) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A8F4Z7_THELT   E=5e-05 s/c=0.28 id=31% cov=44%
----------------------------------------------------------------------------RLDRDTSGVLVIAKNVKTARTLSHmfRNRLVKKEYITLVSGK------------IFGDGFIDKP-----LDGSEALTEYKVLENFRD---TSLLRVILHTGRTHQIRKHFALIGNP---------------------------
>UniRef50_A5WCP4(126-314:364) Pseudouridine synthase n=15 Tax=Moraxellaceae RepID=A5WCP4_PSYWF   E=6e-05 s/c=0.26 id=28% cov=52%
----------------------------------------------------------------------------RIDKDTSGLLMIakkrSTLKVLQEYL--REKTIQKHYLCLVKGQP---ALNEFEIDAPLLRYTVangeRRVKVDKANPEAKLSQTTCKVLARfkmNGEPVSLIEAMPHTGRTHQIRVHLAYLGHPIL-------------------------
>UniRef50_C4R1Q9(99-266:358) Mitochondrial tRNA pseudouridine synthase involved in pseudouridylation of mitochondrial tRNAs n=1 Tax=Pichia pastoris GS115 RepID=C4R1Q9_PICPG  E=7e-05 s/c=0.29 id=28% cov=21%
-----------------------------------------------------------------------LYPCHRLDRLTSGILIIgkTPRAAAKYQTQLKQNSIQKTYIARVDGE-----------------------------------------------------------------------------------------------------
>UniRef50_Q03TY5(50-247:295) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03TY5_LACBA  E=7e-05 s/c=0.25 id=24% cov=55%
-------------------------------------------------------------------DQPGPYILSRLDQETTGALLMTKTPAVVPIMVRhiADKQVQRTYLAWVHGRLTGDGVFTDPIGRDPLDKRKRQVNGD-HAQPAVTHYHVCEYREQA----TLIQLRLETGRTHQLRVHLAAAGHP---------------------------
>UniRef50_Q1WSL9(74-244:295) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=Q1WSL9_LACS1   E=7e-05 s/c=0.29 id=25% cov=53%
------------------------------------------------------------------------HIVTRLDRDTSGIVIFAKH-RYAHALLDSqlkEHKISKTYTAILSGILhNNHYIIDLPIG---RDSTSLIKRKVLFSEKAKRSKTEIFVEER-IRDNTLCKIKLHTGRTHQIRVHCSYLGYP---------------------------
>UniRef50_B9XHZ1(388-541:599) Pseudouridine synthase, RluA family n=2 Tax=Verrucomicrobiales RepID=B9XHZ1_9BACT  E=8e-05 s/c=0.32 id=31% cov=47%
--------------------------------------------------------------------------AHRLDANTSGVVLVTRTRHFASHL-QPQFAHgevGKFYLVKVQGTPKED---SFSCNAPISAEPS-EAGAREVDFEEGLPSRTEfRVLQRNADGTTLLEARPLTGRTNQIR------------------------------------
>UniRef50_Q2CAH0(8-173:215) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=Q2CAH0_9RHOB   E=8e-05 s/c=0.30 id=25% cov=52%
----------------------------------------------------------------------------RLDRDTSGVMIfaLTPHAQRHLGLQFEKRQTRKTYVARVAGRIADKT--GTVDLPLIVDWPNRPKQ--MVDHENGKPAVTDWRVVRASDAETRVRLFPKTGRSHQLRVHMLALGHPIL-------------------------
>UniRef50_A5VLP2(87-240:290) Pseudouridine synthase, RluA family n=13 Tax=Lactobacillus RepID=A5VLP2_LACRD  E=9e-05 s/c=0.32 id=27% cov=50%
----------------------------------------------------------------------------RLDRFTGGLLLIAKHHIASSMISQQVQQHQmlKEYTALVEGQVMDEHGE-INKPIGRKDG----QAARVIDENGQRALTEYWVEERGAKWTR-VRVRLHTGRTHQIRVHFAAIGH----------------------------
>UniRef50_C1SM47(49-245:302) Pseudouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM47_9BACT  E=9e-05 s/c=0.25 id=19% cov=66%
------------------------------------------VINKPAGITVHPAPGHADDTIvnamlaeFDITDDNDLRPgiVHRLDKDTSGLMIVAKNRKSREVLSKvfADRDIDKRYLAVCWGKPKE-----LEFTIEQPIGRHYKDRKRMCVREDGRYSKSGVRVLKQNNNAFLAEIRIFTGRTHQIRVHMSHAGFP---------------------------
>UniRef50_C3XV24(78-261:335) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XV24_BRAFL  E=9e-05 s/c=0.27 id=28% cov=23%
-----------------------------------------------------------------------LYLVHRLDKETTGVMLLakTDDMARQLHSLFRLRKVIKKYWVLTMGVPSHE-------------------------------------------------------------------------------------------------
>UniRef50_A1VAY5(167-340:400) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1VAY5_DESVV  E=9e-05 s/c=0.28 id=29% cov=52%
----------------------------------------------------------------------------RLDGPTSGILMLAGDtaGERQWRKAEDEGGTRKTYLAvctgRLErGTVVRAALDTARRTVT----RVRPCDTDDRLRHTEVVPlahfrlgdlANPITDDSAGVPACDETVTlvccrIRKGARHQIRAHMAHIGHPLL-------------------------
>UniRef50_A8EW74(95-208:251) Pseudouridine synthase n=4 Tax=Epsilonproteobacteria RepID=A8EW74_ARCB4  E=0.0001 s/c=0.43 id=27% cov=21%
----------------------------------------------------------------------------RLDKETSGVMMFAKNEEFQKKAIKEfqANRVYKEYVAIVEGKVVDE-------------------------------------------------------------------------------------------------
>UniRef50_A4FXG9(91-246:298) Pseudouridine synthase, RluA family n=5 Tax=Methanococcus RepID=A4FXG9_METM5  E=0.0001 s/c=0.32 id=30% cov=42%
--------------------------------------------------------------------------VNRLDMDTTGLLIIAKNSYSHQQLAKQMDEgiLEKIYIVVVNGHLDSKE-GVIEDSIDLNDdgikrelstfGKISKTKYKVIEEFNNV---------------SVLEIKLLTGRTHQIR------------------------------------
>UniRef50_C0ZH07(90-244:306) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZH07_BREBN  E=0.0001 s/c=0.32 id=23% cov=51%
------------------------------------------------------------------------RAVNRLDKDTSGLMIVAKN-QWAHEQFSRMQQIRtlqRTYRAIVQGIVESDD------GTI--NTPIGLAENSFITRQVRPDGQTAVTHYRvlaRGEGMSFVEVKLETGRTHQIRVHMSSEGHP---------------------------
>UniRef50_B1XN95(326-499:538) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XN95_SYNP2  E=0.0001 s/c=0.28 id=28% cov=27%
--------------------------------------HSLIAIHKPAGLpsipgrSSQTYDSAFSRLRRDY---QDIFLVHRLDQDTSGILLFAKNAETQQDL-----------------------------------------------------------------------------------------------------------------------
>UniRef50_B9L6B7(43-203:253) Pseudouridine synthase n=1 Tax=Nautilia profundicola AmH RepID=B9L6B7_NAUPA  E=0.0001 s/c=0.30 id=23% cov=51%
----------------------------------------------------------------------------RLDKETSGVLILVKNDEFKKKAIEefKKQNVYKEYITWVSGIV----AEPMKIDLPIKVIKTKSGALAKISKdgEDAVTEIEPILAFRTK---SKVKAVIHTGRTHQIRAHLKAVEHPIL-------------------------
>UniRef50_A8HZL1(93-251:319) Pseudouridine synthase n=12 Tax=Alphaproteobacteria RepID=A8HZL1_AZOC5  E=0.0001 s/c=0.31 id=29% cov=49%
--------------------------------------------------------------------------AHRLDKDTSGCLVLGRHGKalaLLNRLF-AEGQADKTYVAVTRGAPAEET-----------GRIDQPLAKRSPHRGWWMQAVPKGTPGGLEAVTDWRVLARTEglavmalspvtGRTHQLRAHLSHIGFPIL-------------------------
>UniRef50_C1N4S9(30-307:331) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N4S9_9CHLO  E=0.0001 s/c=0.18 id=29% cov=65%
-------------------------------------------------------------------------AIGRLDAETSGVLLFARGGELHRAV--RGQGVKKVYVATVAAPSQEsaltRALSSLTEPLSLRPRDdgdgggddgrggdddgggdgrivdddvrkkkrwSSPATARVVRtwrlddddsdddddggggaadgaryetrraRETWRARRreeldvTPEIERRRDGKDGFvdIEITVTDGAFHLVRRLVKRAGLKMRHLRRTAVGGVSTRGIdDPGDARALT-
>UniRef50_A1AT77(83-233:310) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=A1AT77_PELPD  E=0.0002 s/c=0.32 id=30% cov=48%
-----------------------------------------------------------------------LYPVNRLDRGTSGAVILakssTAAGIFGRQVK--ETGLDKLYLALVAG---------------------RPDGAGVIDAPLDGKECRTDYRLLAQGCGfSLLELLPFSGRMHQIRRHLEMIGHPILGDQRYS-------------------
>UniRef50_Q5WF07(130-245:301) Pseudouridine synthase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF07_BACSK  E=0.0002 s/c=0.42 id=26% cov=52%
------------------------------------------------------------------------HAVNRLDRGTSGLLIVAKH-RYAHDLlsrLQQQGGVKRCYKALVTGVLSEKA------GIINAPIDRKPGSiIEREVGPGGKSAITHYKVEAESKTHSLVSLQLETGRTHQIRVHFAYIGHP---------------------------
>UniRef50_C9RKF9(148-323:386) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKF9_FIBSS  E=0.0002 s/c=0.27 id=25% cov=53%
-------------------------------------------------------------------------IAHRLDQETSGLIIAALHGDTLRDFTRmiREHVVDKFYFALVKGNLKKDrgtISESLLRTDSAKGSKMLVGQDDENAQKAITHYRVKQHYEGYDL----VKIKLETGRMHQIRAHFASIGHP---------------------------
>UniRef50_B1XXM0(128-302:369) Pseudouridine synthase n=6 Tax=Burkholderiales RepID=B1XXM0_LEPCP   E=0.0002 s/c=0.28 id=27% cov=53%
----------------------------------------------------------------------------RLDKDTSGLMLvaksLQAHTALVRAIA--ARDVKREYLALVHGavmdglqvidaPLGRDPVSRVRMAIVASGKPARTDVRRLaVAELPGDGVRQLPGATRAPRQVSAVHCQLHTGRTHQIRVHLASRGHPLL-------------------------
>UniRef50_Q31HX2(36-188:241) Pseudouridine synthase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HX2_THICR  E=0.0002 s/c=0.32 id=29% cov=48%
--------------------------------------------------------------------VPTALIVHRLDMDTSGIMILAKHKashrhlsiQFQDRLT------EKTYQAICFGKPS-----------TSQGHLNLPMRCDWENRPLQII----DLKQGKAASTHWkltaqydnafeVNLTPVTGRSHQLRLHMKMLGHPIL-------------------------
>UniRef50_A9IIW7(104-286:324) Pseudouridine synthase n=5 Tax=Bordetella RepID=A9IIW7_BORPD   E=0.0002 s/c=0.26 id=27% cov=51%
----------------------------------------------------------------------------RLDKDTSGLMVVARNelaqthlvRQLQARSMGREYIALAHGWLPVAGKVDRPIGRDAR--VPVRMSVERP-----IAPKPAITHYAPLRRGRApDGPVTEVACRLETGRTHQIRVHLASLGHPLL-------------------------
>UniRef50_A5DTZ4(116-273:430) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DTZ4_LODEL  E=0.0002 s/c=0.31 id=21% cov=52%
----------------------------------------------------------------------------RLDKVTSGVVILCKNRdaavKFLNILLEKSDKVKKIYLARVNGKFPDGVYRYTcpILAVNMNGYIQPSNLESLLTLTSTIFER---VNFDSLSNTSIVRCQPISGKFHQIRIHLRNLGFP---------------------------
>UniRef50_Q057L6(101-255:317) Pseudouridine synthase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057L6_BUCCC  E=0.0002 s/c=0.31 id=23% cov=67%
----------------------------------------LIIFNKPYGFavhggsgISYGVIEIFRKIRSDLKFLELVH---RIDKETSGILILSKKRSILKKmhINLREKKIYKEYLAILHGYWSKK--NKIVKLPLLKKKNIKQKKKVCVHKEGKLAQTNFEIKKYLN-NKTLVKIIPITGRTHQIRVHTAQFGHP---------------------------
>UniRef50_C1F7V3(109-283:355) Pseudouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7V3_ACIC5  E=0.0002 s/c=0.27 id=28% cov=51%
----------------------------------------------------------------------------RLDKETSGLIIVARNDAAHQRLAEmfSQREIHKTYLALVHGHIAED--RGTINAAIARDVIRRTRMTTRRTEGARTAISH--YRVQRRIETRWGKFTLVSvrietGRTHQIRVHLSSIGHP---------------------------
>UniRef50_Q03WF6(43-246:312) Pseudouridine synthase n=9 Tax=Firmicutes RepID=Q03WF6_LEUMM   E=0.0002 s/c=0.24 id=28% cov=72%
-----------------NHKVKRsykvVSGDTISITPPETQETKIeaenipldiiyedddiIVVNKPQGMVVHPAAGHSSGTLVNALlhhsplstingeFRPGI--VHRIDRDTSGLLMVAKNDKAHRSLSEqlKSHKNQRVYYALVRGEFTEDsgtieapigrhKIDRKKQAV-IEGGREAVTHFRVL---------------KRYVGYTLLKVSLETGRTHQIRVHMSYIGHP---------------------------
>UniRef50_Q2IJ07(18-174:241) Pseudouridine synthase n=6 Tax=Cystobacterineae RepID=Q2IJ07_ANADE   E=0.0003 s/c=0.30 id=28% cov=48%
----------------------------------------------------------------------------RLDRNTSGVLVLarTAAAHRALNLAFDRGEPRKRYLALVRGVPPAEqrievAIAPARKG---RMRPAAPDDprgkpsatvVRRLEAYPSHPLGGGPLALVEALPET--------GRTHQIRVHLAAAGTP---------------------------
>UniRef50_C8PQT2(16-174:246) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQT2_9SPIO  E=0.0003 s/c=0.30 id=19% cov=53%
-----------------------------------------------------------------------LYAVHRIDKDTSGILLYALNAE-AHRTLNTAFqnrEIKKTYRLLIHGRVSEEQF-TVDLPLRADGDALHRTVVDKRRGKEAVTHFTVLETFRQF---SLLEACPVTGRTHQIRAHLAAAGYP---------------------------
>UniRef50_D2R795(156-277:341) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R795_9PLAN  E=0.0003 s/c=0.39 id=26% cov=54%
---------------------------------------------------------------------PRIFAVHRLDRDTSGLMVFARTPEASTALIKlfKKHHVTRAYVAVVHGTPVEQKIEtYLVR--DRGDGLRGSSPAGKVAEEAQRAVTHVRLMQTIG-PYSVVECRLETGRTHQIRIHLAEAGH----------------------------
>UniRef50_Q7NAY8(93-262:330) Pseudouridine synthase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAY8_MYCGA  E=0.0003 s/c=0.28 id=19% cov=53%
--------------------------------------------------------------------------VNRLDTYTTGIMLgaknLKAQQALNQIIKNRDLK--KFYHCLVHGEINPKKATLTAYLTKDPNRSLVSIQKEKTNDNKIIITRYQTLYYFKKQNYTLLDVELITGRTHQIRAHLASINHP---------------------------
>UniRef50_D1PDP7(344-508:556) Pseudouridine synthase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDP7_9BACT  E=0.0003 s/c=0.29 id=25% cov=33%
----------------------------------------------------------------------------RLDMATSGLMIIAKTEFAYHRLQKEflNHRVQKKYVAIVCGKDKESCNRILKEAEGGRGYISLPLIADFLDRP----------------------------------------------------------------------
>UniRef50_B0U5V6(107-272:330) Pseudouridine synthase n=7 Tax=Xylella fastidiosa RepID=B0U5V6_XYLFM  E=0.0003 s/c=0.29 id=22% cov=52%
----------------------------------------------------------------------------RLDRDTSGLLIMAKKRaaliELQALMREASvngkegRGIAKRYLTLLSGRM-PNGVMSVDAPLHINLRHGGERHVRVHHDGKPSKSRFRLLERRGG--QSYCEVLIETGRTHQIRVHAQHLGHP---------------------------
>UniRef50_D2QLU1(15-175:248) Pseudouridine synthase n=53 Tax=Bacteroidetes RepID=D2QLU1_9SPHI   E=0.0005 s/c=0.29 id=29% cov=21%
----------------------------------------------------------------------------RLDRPVSGLVVFARTSKALERMNEifRKRQVQKTYWAVVRRKPPKD-------------------------------------------------------------------------------------------------
>UniRef50_B4D5D1(17-191:265) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5D1_9BACT  E=0.0005 s/c=0.27 id=28% cov=50%
----------------------------------------------------------------------------RLDRETSGLTLVAKHRAAARELhlqMQGR-RVEKEYLALVWGWPERETF--TIDAPILRQGECMPSPIHL---KQAVHPDGAAARTRFQVECTFTLETSNgnrfalvrafpeTGRTHQIRVHLAHAGHP---------------------------
>UniRef50_B6J6C4(56-251:327) Pseudouridine synthase n=7 Tax=Coxiella burnetii RepID=B6J6C4_COXB1   E=0.0005 s/c=0.24 id=27% cov=38%
-------QKTKAREKVRENQFIEIEAQLEPNERWVPQPipldviyedETLLVINKPVGLIVHpgagVRDQTLINALLHYDPSLSVVPrAGiihRLDKDTSGLLLI---------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B0T2G2(49-236:286) Pseudouridine synthase n=6 Tax=Caulobacteraceae RepID=B0T2G2_CAUSK   E=0.0005 s/c=0.25 id=25% cov=59%
----------------------------------------------------------------------------RLDRDTSGVILTARTKPAATFLGKAlmGKRFRKTYWAIVTpGAPEPRGGQidsPLRRESIGREAYMRVCEA---DHPDAETARSRYRTLAATEGAALVELSPDTGRMHQLRVHMASIGRPIAGDSRYG-GALMLGGAP---------
>UniRef50_A0QT71(126-244:291) Pseudouridine synthase n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QT71_MYCS2  E=0.0005 s/c=0.39 id=23% cov=53%
-------------------------------------------------------------------DLPELAPAHRLDRLTAGVLLFTVRRELrgAYQTMFARGDVQKTYLAHAEGVPKIALPATLRS--RIVKHRGRLQAFEEPGEPNA-------ETYVEAVGDGLYRLTPRTGRTHQLRVHMASIGLP---------------------------
>UniRef50_P74346(106-267:327) Uncharacterized RNA pseudouridine synthase slr1629 n=19 Tax=Bacteria RepID=Y1629_SYNY3  E=0.0006 s/c=0.29 id=26% cov=52%
----------------------------------------------------------------------------RLDKDTTGAMVVAkTELALHNLQVQLKEKTaRRLYWGIVYGSPKE--IQGTVN-LPVGRHPGDRQKMGIVPVEKGGREAVTHWRLLERIgNHSWLEFQLETGRTHQIRVHSKQMGHP---------------------------
>UniRef50_Q67N67(83-266:327) Pseudouridine synthase n=1 Tax=Symbiobacterium thermophilum RepID=Q67N67_SYMTH  E=0.0006 s/c=0.25 id=23% cov=58%
--------------------------------------------------------------------DPVARPVQRIDRETSGLVLFAKDPAVAGLLAreLERQKLERRYvavvegaVAADAGTVDRPIRRVWGHPVarEVAEGPRTPEQERLLAEAAaqgralredWTAAGQPAVTHwrvlRRWPAATMLELRLETGRTHQIRVHMAYLGHPLL-------------------------
>UniRef50_A9GIV4(117-278:350) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIV4_SORC5  E=0.0007 s/c=0.29 id=23% cov=57%
-------------------------------------------------------------------PGERLFLAHRLDRETSGVLLLCRTPEADRTVkaqFEERTGVVKRYAAIAWGWPERDTF-RVELPLELDDASRYKVKMRVAPPGRGLASATAcEVLGRRADPLTgrryaLVRCTLETGRQHQIRVHLAASGLP---------------------------
>UniRef50_B8E0R4(89-247:303) Pseudouridine synthase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0R4_DICTD  E=0.0007 s/c=0.29 id=25% cov=50%
----------------------------------------------------------------------------RLDKDTTGLLIIAKNDLSHQKLSEQLKNRTlrRTYWALCEGeIPWEE--KRIEAPI---GRHPINRKKMAIVPYGKIAITNFKVLERFKG-YTLISADLETGRTHQIRVHISHLGFP---------------------------
>UniRef50_Q30NR3(39-236:304) Pseudouridine synthase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30NR3_SULDN  E=0.0007 s/c=0.23 id=19% cov=68%
---------------------------------------RFVVFDKPSGML---IHPQNRFTEYSLIDElkaqfgMNANIAHRIDQETSGLVLCAKDKksEVDIKMMFQERDMKKKYLAMVHGELKEE-LRIDAPLLRYDDEKSALVRMVVKVDPTGKESLTfvRPLKYFPITDTTLVECSPHTGRQHQIRVHMFHMKHP---------------------------
>UniRef50_C0Z877(103-256:310) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z877_BREBN  E=0.001 s/c=0.30 id=25% cov=51%
-----------------------------------------------------------------------VHPVHRLDKDTSGAILVAKSSyghQLADRLLR-EGGIHREYLAVASGVLSEGAgtIDA-----PIGRDARHPTKRRVVEsgDPAITHYEVQQTSEEMTLARVWLET----GRTHQIRVHFAHIGHP---------------------------
>UniRef50_B3GZS7(2-218:232) Pseudouridine synthase n=10 Tax=Pasteurellaceae RepID=B3GZS7_ACTP7   E=1e-54 s/c=0.99 id=54% cov=89%
------------------------TKKRPLKLQLSFEDTVVVLFNKPFDVLTQFTDEQGRQTLKDFIPIPQIYPVGRLDRDSEGLLLLTNNGEIQHRLANPKFEKQKTYLAQVEGIPQAADLAKLEKGVELKDGLTKPAKAKAISAPNYEWQTAPKIRERKTIPTSWIELKIHEGKNRQVRRMTAHIGFPTLRLIRIGLGQFQLGELNSGEYRVLDE
>UniRef50_C8WAL4(67-253:279) Pseudouridine synthase n=7 Tax=Coriobacteriaceae RepID=C8WAL4_ATOPD   E=1e-51 s/c=1.09 id=34% cov=82%
----------------------------------------YLMLNKPAGYLTTMKDPQGRPTIVDMVPTdtyPGLFPVGRLDMDTTGLLFFTTDGQMAQELLHPSKHVWKHYVAHVVGTPTEEQLNRLREGIELEDGPAAPAEVEIISDDVKMKNLLAPQGLGKTGggePNALVSVTIREGRKHQVKKMLLAIHHRVLALHRDTFGPLHLTRVKEGEWRLLTE
>UniRef50_C6MZI4(55-226:240) Pseudouridine synthase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZI4_9GAMM  E=1e-50 s/c=1.17 id=59% cov=80%
----------------------------------------LILFNKPFAVVCQFTGEKHEHTLAEFIDKPDFYAAGRLDKNSEGLLLLTNDGALQHQLTHPKFNKKKYYWVQVEGIPTAADLEPLKKGLVLKDITFLPAEVRCIEEPA-LWPRTPPVRFRQSIPTSWLEIILREGKNHQVRRMTAAMGFPTLRLVRHRIGDWQLGDLQPGEFR----
>UniRef50_Q0AX41(26-223:239) Pseudouridine synthase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX41_SYNWW  E=4e-49 s/c=0.99 id=33% cov=75%
----------------------------------------YLLLHKPAGYISSLADPQGRPRVIDLLSAvnTRVFPVGRLDYDTEGLLLLSNDGEFSNLMTHPRYLIPKKYEAWVQGLVKPDTIRQLEQGVALEDGITAPARVRLLSSKKGQ---------------SLLELEIHEGKKRQIKRMCLAVGHRVTKLKRTALAFLTLEGVPRGQFRFLT-
>UniRef50_C7MNA2(94-274:296) Pseudouridine synthase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MNA2_CRYCD  E=2e-47 s/c=1.05 id=35% cov=76%
-------------------------------------PAVTLALNKPAGIITTMKDLRGRRCVADIMPTeqyPGLFPIGRLDQDTTGLLLFSTDGNLGNALLHPSHGVSKVYRATIEGSIGQAALEQLASGILLDDGMTAPARVSVV---------------QAGKKHSVIELELHEGRKHQVKRMCQAVGHPVVKLHRASFGPIDLAGLATGAYRRL--
>UniRef50_A4BW35(109-294:305) Pseudouridine synthase n=3 Tax=Flavobacteriaceae RepID=A4BW35_9FLAO   E=1e-46 s/c=1.01 id=34% cov=76%
-----------------------------------PEQKKYILLNKPKNYITTMDDDRGRKTVMDLISnatKERIYPVGRLDRNTTGLLLFTNDGELAKKLTHPKHDVRKLYHASLDKKLELKDLEKLRGEVLIEGKKVFIDAVSYVDGQ----------------PKSEVGIEIHSGRNRIVRKIFEHLGYKVSKLDRVIFAELTKRNLPRGRWRELT-
>UniRef50_P0AA45(28-224:231) Ribosomal small subunit pseudouridine synthase A n=156 Tax=Gammaproteobacteria RepID=RSUA_ECO57  E=1e-45 s/c=0.94 id=35% cov=73%
---------------------------------------RYFMLNKPQGYVCSTDDP-DHPTVLYFLDEPvawKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKdlTKPAVLEVITP-------------------TQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDaDLAPGEYRPLTE
>UniRef50_D1C7P2(29-224:337) Pseudouridine synthase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7P2_SPHTD  E=3e-45 s/c=0.93 id=38% cov=81%
---------------------------RVDGKRLRPERRRYIMLNKPPGYITTVSDERGRRTVMDLVQVPeRVVPAGRLDRPTAGLLLLTNDGDLLFRITHPRYELEKEYEVLVDGHPPPEVLDQLRRGVTVDGERVVPDQVR---------------PLRIEEAGTVLRIVIHEGRNRIVRRMMDRVGYPVLKLTRTRIGPIHVRGVPLGAWRDLT-
>UniRef50_C6X4T2(176-362:371) Pseudouridine synthase n=2 Tax=Flavobacteriaceae RepID=C6X4T2_FLAB3   E=4e-45 s/c=0.98 id=30% cov=75%
----------------------------------------YVLLNKPKGYISTTKDEKARKTVMDLVAnasPYRVFPVGRLDRSTTGVILLTNDGHMTKKLTHPSFNMKKIYHVTLDRKLDRADLNAIAEGVRLEEGVAEVDSISYIEGK----------------PKNEVGIEIHIGWNRVVRRIFQRLGYEVEALDRVMFAGLTKKNIKRGHWRILTE
>UniRef50_A0Z1Z6(24-199:208) Pseudouridylate synthase n=2 Tax=Proteobacteria RepID=A0Z1Z6_9GAMM   E=5e-45 s/c=1.03 id=51% cov=79%
----------------------------------------IILLNKPFRVLSQFSDRDNDPprlTLANLLSAPEFRVAGRLDYDSEGLTLLTDDGKLQQQIANPKFKVWKTYWVQVEGAPKQQAIEQLTSGVVLNDGLTKPAKVRAIDPPD-LWERSPSVRFRAHIPDAWLEISIQEGRNRQIRRMTAAVNLPTLRLVRIAIGDWEIGNLQPGEY-----
>UniRef50_C6JI84(46-226:236) Pseudouridine synthase n=2 Tax=Fusobacterium RepID=C6JI84_FUSVA   E=2e-44 s/c=1.00 id=41% cov=75%
----------------------------------------YYILNKPLEVLSSSKDDRGRKTVVDLINcKERIFPIGRLDYNTSGLIILTNDGELFNRIIHPKAEIFKEYYVKVLGEIKENNVELLKNGVELDDGITLPANVRIL---------------RREKGKTELLVAIREGRNRQVRRMMDKINHPVITLRREKIGNLSLGNLKLGEYRELT-
>UniRef50_B2ULL1(2-179:188) Pseudouridine synthase n=4 Tax=Bacteria RepID=B2ULL1_AKKM8   E=3e-44 s/c=1.01 id=50% cov=81%
----------------------------------------ILAFNKPYGILSQFTKEaPHHRTLAEFGFPPGVYPVGRLDADSEGLLLLSDEKGLADRLLNPSGRHPRTYWSQVEGTPSETDLRPLElGGLRIRGHCTLPCRARLMRREPDVPPRIPPVRYRASIPTSWLELTLVEGKNRQVRRMTAAIGFPTLRLLRARIGNFSLAGLKPGAWKEL--
>UniRef50_Q7UUP0(72-247:395) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UUP0_RHOBA  E=1e-43 s/c=1.01 id=31% cov=77%
-----------------------------------PQKLVYYVVNKPVGIVTTNRDPRGRPRVIDLVPPtERVFPVGRLDISSEGLILLTNDGDLAQKLAHPKFGIQKVYRVVVAGEVRGETMKKMREGIYIAEGLVQVDGAKII---------------KARTKATEMEIRLKEGKNREIRRILARFGHKVQQLRRVAIGPLKLGDVPRGAYRKLT-
>UniRef50_C4FUC8(40-229:243) Pseudouridine synthase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUC8_9FIRM  E=2e-43 s/c=0.93 id=35% cov=77%
------------------------------------QRYHYYLLNKPEGILSATED-RHHQTVIDWLGEGyqhlDLFPVGRLDIDTTGLLLLTNNGQLAHQLLSPKKKVDKTYTATIRGLVDQADIAAFEAGLDLGDFTSLPAELTVLSQDV-------------DQGTSQIQVIIQEGKFHQVKRMFQAVGKEVLSLHRLAMGPLRLEsDLAHGQWRSLTE
>UniRef50_A4J9G8(31-233:249) Pseudouridine synthase n=47 Tax=Bacteria RepID=A4J9G8_DESRM   E=2e-43 s/c=0.87 id=42% cov=74%
----------------------------------------YLMLNKPQDVLSATEDASD-KVVIDLLDPTyhsfNPFPVGRLDKDTEGLLLLTNNGKLAHQLLSPKKHVPKTYYALVQGLVTEEDVAAFARGVELDDGyRTLPGQLKII----------------RSAPQSEIELTIYEGKYHQVKRMFEAVGKRVIYLKRLSMGPLVLDnNLKPGEYRELTD
>UniRef50_A5KLG0(45-254:261) Pseudouridine synthase n=8 Tax=Bacteria RepID=A5KLG0_9FIRM   E=2e-43 s/c=0.84 id=36% cov=82%
----------------------------------------YFMLNKPAGVVSATEDKKER-TVIDLIKEskrKDLFPAGRLDKDTEGLLLITNDGQLAHRLLSPKKHVDKIYYAKIKGIVTEEDVRLFEKGVHIGDeKPTMPAALEILSvqkerrkekiKEQKILPETKNETDEKEDGYSEIYLTIKEGRFHQVKRMFRAVGKEVVYLKRIQFGTLTLDpSLKPGQYRKLTE
>UniRef50_C7H5G4(46-248:294) Pseudouridine synthase n=8 Tax=Clostridiales RepID=C7H5G4_9FIRM   E=4e-43 s/c=0.87 id=37% cov=78%
----------------------------------KNQQLYYLALYKPRGYVTTASDELGRKTVMELVSdiPARLYPVGRLDKDSEGLLLMTNDGAFAQAVTHPSGGISKLYRVTVQPRADESQILKMSSGVVLDDGtKTMPCAINVVTDEPGR---------------TVMEMTLKEGKNREIRRMCEAVGLEVVRLKRNAEGVVKLGMLKPGTYRELTK
>UniRef50_C9RK28(26-230:243) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RK28_FIBSS  E=5e-43 s/c=0.86 id=33% cov=86%
------------------HQVDETKDQVTVDGKllklPTNKKTKVIMFHKPAGCVCTKDDPQGRRTVYDYLPPgyHNFKYVGRLDLQSRGLLLFTDDGELLYRLTHPSFEVPRSYYVWTTRPLSESAAQRLVDGVDIRD-PEDPDAQEEIAFATDVY-----------LENGFAELVLIEGKNREIRRMMRAIGYEIRDLKRVSYCQIQLGDLPAGEFRELT-
>UniRef50_B2TQQ1(29-246:264) Pseudouridine synthase n=8 Tax=Clostridium RepID=B2TQQ1_CLOBB   E=1e-42 s/c=0.80 id=29% cov=82%
----------------------------------------YYMFNKPSGCITATKDN-IHRTVFDYFDEDmnGVFHVGRLDKDTEGLLLLTNDGEFEHKVMHPEKHVEKTYFFWALGSLDDEDKKQLQEGVFIgsNEALTKPAKIDIHKSGSYIEFKEEipinSLKNKDHQPVVSGYLTISEGQKHQVKRMLKAVGCYVIYLKRISIGGLKLDEsLKMGDYRDLTK
>UniRef50_D0MIA1(47-235:268) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIA1_RHOM4  E=2e-42 s/c=0.92 id=37% cov=74%
----------------------------------------YILMNKPHDTITTCDDERGRRTVLDLINLPpeqknGLFPVGRLDRNTTGVLLLTNDGELANRLMHPRYRVEKIYVARTARPVKPEEAEQLRRGVQLEDGPARAVQVAV-----------------NPADPHEIALMIYEGRNRQVRRMLEAIGHEVVQLKRTHYAGLTTKGVRPGKWRRLTD
>UniRef50_Q7VBH8(64-229:237) Pseudouridine synthase n=1 Tax=Prochlorococcus marinus RepID=Q7VBH8_PROMA  E=5e-42 s/c=1.04 id=38% cov=76%
---------------------------------------KVILLNKPTGVISTCRDTHGRKTVLDLLPdnlQKGMHPVGRLDKDSRGALIISNNGLLTLHLTHPRFNHKKRYSVLITGVPSKNTLKKWRNGIEIDKKTTRKALVNIV---------------KRQGNNTLLEIVLFEGRNRQIRKVADKLGHPVIDLIRIEIGNIKLNGLKEGAWREINE
>UniRef50_B7L2Z9(71-250:320) Pseudouridine synthase n=4 Tax=Rhizobiales RepID=B7L2Z9_METC4   E=5e-42 s/c=0.96 id=37% cov=75%
----------------------------------------YLLLNKPRGLLTTYGDPQGRKTVYDCLaghDLPFLAPVGRLDCASEGLLLMTNDTRWAHRLLDPASNVDKVYHVQIDRRPDEALLTGLREGVAHDGERLAAKSV---------------APLRVGERNAWLEVVLSEGRNRQIRRMMALNGAEVLRLVRVAVGGVRLGDVRKGAFRHLTD
>UniRef50_B9XS61(30-226:235) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XS61_9BACT  E=5e-42 s/c=0.87 id=33% cov=75%
----------------------------------------YVALNKPRGYVCSRKDDRKRKVIGDLLPAEwdNLYSVGRLDSDSEGLIFLTNDGEFSLHLTHPRYRVLKKYLATVEGRVEQEMLQRFKHGIVHEGEKLKVDRARTLSVQNS---------------TSLVELELTEGKNREIRRLFESQGLTVSRLVRMQIGKIKLGELRSGKWRMLTE
>UniRef50_B6IXC3(71-253:551) Pseudouridine synthase n=2 Tax=Alphaproteobacteria RepID=B6IXC3_RHOCS  E=6e-42 s/c=0.94 id=39% cov=77%
---------------------------------PEPEPTRVWRYHKPDGLVTTARDEKGRPTVFDNLPPelPRVVSVGRLDLTSEGLLLLTNDGALARHLELPVTGWLRRYRVRVHGAPDEAQIAKLAQGIIIEGIEYGPIE---------------TVVDRSVGANTWLTVSLREGRNREVRRVMEHLGLPVSRLIRVAYGPFQLGKLEPGQVEEV--
>UniRef50_Q3MC44(73-263:288) Pseudouridine synthase n=21 Tax=Cyanobacteria RepID=Q3MC44_ANAVT   E=6e-42 s/c=0.90 id=39% cov=75%
----------------------------------------YLLLNKPTGVVSTCYDPQGRKTVLDLLPEElrkgsGLHPVGRLDAYSTGALILTNDGDLTFKLTHPSHNIPKTYQILVKGHPPEAVLKMWREGVLLDGRKTRKAKVSLLESLAEK---------------SRLEIVLQEGRNRQIRRVAEQLGYPVIKLHRTAIGSIQLQTskqplLRAGNYRILRD
>UniRef50_C6W5I1(3-189:201) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5I1_DYAFD  E=3e-41 s/c=0.91 id=50% cov=82%
---------------------------------------QYFLIYKPFNMLSQFSREGDHQTLADLgfTFAKDIYPVGRLDADSEGLLLLTNDNFLKTKLLEPRNRHTRTYYVQVEGEVTDEACRQLSAGVSIsingKQYKTLPAEIAKIAEPE-LPERNPPIRFRKNIPTSWLSVTLREGKNRQVRRMTAAVGFPTLRLVRWSIGKISLADKKinfpnPGDVWEVT-
>UniRef50_UPI0001BC42E2(35-221:235) ribosomal small subunit pseudouridine synthase A n=3 Tax=Fusobacterium RepID=UPI0001BC42E2  E=4e-41 s/c=0.91 id=35% cov=74%
------------------------------------QEFRYYILHKKAGYVTALEDSR-EATVMDLLPEWvikkDLAPVGRLDKDTEGLLLFTNDGKLNHRLLSPKSHVDKTYHASLECDITEEALEKLREGVMIGEYKTLPAKAEKLEDRK-------------------IALTIREGKFHQVKKMLEAVGNKVIYLKRISFGKLVLGDLELGEVKEVS-
>UniRef50_B5ELL5(70-245:268) Pseudouridine synthase n=3 Tax=Acidithiobacillus RepID=B5ELL5_ACIF5   E=6e-41 s/c=0.96 id=38% cov=74%
---------------------------------------QVLLLHKPRGVLTTRQDERGRATVYDLLPgSPWLAPVGRLDQASSGLLLFSNDPHWAQRLLDPDQHVAKTYHVQIRPPLSTDTVVQLAADSVLDGEPCLPMQIREL---------------RCGGKTQWLEFILQEGRNRQIRRLLAACDREVLRLIRVAVGNLPLGELRAGEWR----
>UniRef50_C8NNL7(123-315:329) Pseudouridine synthase n=8 Tax=Corynebacterium RepID=C8NNL7_COREF   E=6e-41 s/c=0.88 id=32% cov=76%
-----------------------------------NEDLEYFVLNKPRGMHSTMSDDLGRPCVGDLVSEKtasgqRLFHVGRLDADTEGLLLLTNDGELANRLMHPKYEVRKTYLATVRGEAGPNLVTTLRKGIELEDGPAKADYVQIIDTFQGK---------------SLIRLEIHEGRKHIVRRMLDEAGFPVERLVRTKLHTVQLGEQKPGSLRAL--
>UniRef50_A9BF27(3-206:220) Pseudouridine synthase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BF27_PETMO  E=1e-40 s/c=0.82 id=34% cov=78%
--------------------------------QKKAENKVYYLLNKPKGILCTFKDDFGRKTINDLIKgkiEERVFYVGRLDYDSSGLLLLTNDGDLANYLLRPENKVTKVYEVLVKGSPSKKELQMLEEGITLEtGYKTMKSKVKILKKQKDL---------------SLLQISLNEGKKRQIKLMIKALGYKVIELKRIKFGPWSIKEVPkPGNIKSL--
>UniRef50_B0B8U9(46-225:241) Pseudouridine synthase n=10 Tax=Chlamydiales RepID=B0B8U9_CHLT2   E=2e-40 s/c=0.93 id=30% cov=59%
-----------------------------------------------------------------------LFTVGRLDKETSGLILVTNDGEFANRVIHPSFGITKEYLLKVSRDVTARDLETLMAGTVIDGKVVRPVSVKKVRRGT-------------------IKIIVNEGKKHEIRLFAEAAGLQLLELKRIRIGSLVLGGLPYGKYRELTD
>UniRef50_D2RB61(71-272:284) Pseudouridylate synthase n=2 Tax=Gardnerella vaginalis RepID=D2RB61_GARVA  E=4e-40 s/c=0.82 id=34% cov=84%
---------------------KRQKVRVDGSRVKFNTKLVTLALHKPKRVLSAMDDPKGRFTLRDIVgdKYERIFHMGRLDYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATVEGKINGMVCRRLvSQGVNLEDGWIKLDRCAIID---------------QNHDTTMVKIVLHSGKNRIVRRIFGAVGFPVKRLVRTQIGPIKLGDLKAGSYRVLSQ
>UniRef50_Q1MQ05(49-255:270) Pseudouridine synthase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQ05_LAWIP  E=4e-40 s/c=0.80 id=37% cov=79%
--------------------------------QLKNKKYYYLSMYKPIKVISSVKDPQNRLTVLDFIPFPwknyRLYPVGRLDFFSEGLLLITNDGELTQRLTHPRYHISKVYHVLIRERILNTTLKNISKGITLSDGtKLPPAKVRVLSSITET-------------NTTWLEITLQQGINRQIRRMCKELGLTILKLIRVKQGNINLSNLQPGEVRPL--
>UniRef50_C7I043(222-400:562) Pseudouridine synthase n=4 Tax=Proteobacteria RepID=C7I043_THIIN   E=5e-40 s/c=0.93 id=35% cov=79%
------------------------------KRRLRPAQARVLAYHKPTGEVVSFKDPEGRPTVFQHLPKlqgAKWTAVGRLDINTEGLLLFTTSGDLANRLMHPSYGAEREYAVRVLGELDAAARDELLEGVQLGDGPARFLSLEEAGGEGA---------------NRWWRVVISEGRNREVRRMFEAVGLTVSRLIRVRYASVVLPaGLRRGDFVEL--
>UniRef50_A1UU09(84-267:499) Pseudouridine synthase n=4 Tax=Bartonella RepID=A1UU09_BARBK   E=5e-40 s/c=0.90 id=33% cov=75%
--------------------------------------TRLWLYHKPSGLVTTNRDPEGRPTVFDNLPKemPRVVSVGRLDINTEGLLLLTNDGGLARVLELPLTGWVRKYRVRAHGKIKQSELDKLKNGIAIDGIFYGSIDASI---------------DREQGSNVWLSVALREGKNREIKNFLGALGLSVNRLIRVSYGPFQLSDLEEGAVREL--
>UniRef50_C7H4Z6(40-224:235) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Z6_9FIRM  E=7e-40 s/c=0.89 id=33% cov=73%
----------------------------------------YLMLNKPEGVVSASTDKRD-TTVVDLIgdayPRRELFPVGRLDKTSTGFVLLTDDGGFAHEILAPKRHVSKTYTVVIDTPLTEEMRRGFAEGVTLADGTALsPAEVEALTPDGLT-----------------VKVRLRQGVYHQIKRMFGVYGAGVNALHRDAIGGLALDpALAPGQWRELS-
>UniRef50_Q5SLZ5(29-222:243) Pseudouridine synthase n=4 Tax=Bacteria RepID=Q5SLZ5_THET8   E=2e-39 s/c=0.85 id=34% cov=78%
-------------------------------RPLEVRRHLHVLLHKPPGFVTSRTEGPSVYALLQGFPTRDLSPVGRLDKDAEGLLLFTTDGLLLHRLTHPRHKVAKRYLVHLERPVGPKDQEAFREGILLDGKKTLPAELTPLEDP------------------TWAEVVLKEGRFHQIKRMFRARGNRVLRLKRLALGPLELGDLPPGKARPLTE
>UniRef50_B0SBU8(41-229:243) Pseudouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SBU8_LEPBA  E=5e-39 s/c=0.86 id=33% cov=74%
----------------------------------------YFMMNKAPDCITATEDPR-EKTVMDYLSERHrnmnLFPIGRLDKETEGLLLFTTDGTLAHYYTSPKHFVEKEYYAEISAPVTAFDISQFESGITLDDGyKTLPARLAIPDPSNPHIAT----------------VWLREGKYRQIRRMFQSLGKEVQYLKRVKMGNLELDrDLEVGSYRELTE
>UniRef50_B6BUN1(56-244:257) Pseudouridine synthase n=1 Tax=beta proteobacterium KB13 RepID=B6BUN1_9PROT  E=6e-39 s/c=0.86 id=28% cov=84%
------------------NEIIHINGRRIYFKNAEKRESRLIIYHKPEGEIVSHSDPKHQKTVFQKLPKvknGKWISIGRLDINTSGLLLITNDGKLANHMMHPSQQIDREYSVRILGEVTEEIINNIRKGVKLDDGVAHVDTFEHTGGEGA---------------NQWFRIILKEGRNREIRRLVESQNLKVSRLIRTRYGPLNLPShLKRGQFMEL--
>UniRef50_Q0F269(83-267:289) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F269_9PROT  E=1e-38 s/c=0.87 id=35% cov=76%
--------------------------------------HTYILYNKPKGQLCSRLDKKKRPLIYDFIDVaPNVQSIGRLDMDTEGLLMLTDDGALTRALTHPAAKVPREYRARVAGIVELETLAKLRRGGMDIGR-------------GDTSDAWEVTVDSESAGHTWLNIIILRGRWREVRRTLEECGHPVRRLMRTRFGPIKLDeDMPKGTWRAL--
>UniRef50_C0QV84(48-238:359) Pseudouridine synthase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QV84_BRAHW  E=1e-38 s/c=0.84 id=29% cov=85%
------------------YRVKEDDSVSIDRELIKRQTKRYMALYKPIGVVSTTKYLPGRRIITEFFKgiKERLFYAGRLDSESRGIMIITNDGEFANIITHPSYEILKVYDVTVNGKIDSEALLNASKGITIKNVSYSPFKFKILS---------------KGRIQSKIRLTINEGKNREIRKIFDHLGYKVIDLERISVGCVSKydevsGTLEAGHIRDLTK
>UniRef50_B4RA72(176-377:521) Pseudouridine synthase n=4 Tax=Caulobacteraceae RepID=B4RA72_PHEZH   E=2e-38 s/c=0.80 id=36% cov=79%
----------------------------------EPEPVRVFRYHKPVGLVTTHKDPQGRPTVFEALPEglPRLISVGRLDLNSEGLLLLTNDGGLARALELPATGVVRRYRARAHGRITQERLDTLKDGITVEGVRY-----------GAIEARLDKAKEGHQGANLWLTVTLQEGKNREVRRVLEALGLKVNRLIRLSYGPFALGTLDVGEIEEV--
>UniRef50_Q3IC94(25-222:327) Pseudouridine synthase n=6 Tax=Bacteria RepID=Q3IC94_PSEHT   E=3e-38 s/c=0.81 id=30% cov=75%
-------------------------------------PKRvYIAYNKPVGITCTTERKIQSNIVKAVNYPDRIFPIGRLDRPSEGLIFLTNEGDIVNKILRAGNNHEKEYVVTVDKPLNRQFVAKMGNGVPILDTITKKCKVT-------------------QTGAQQFTIILTQGLNRQIRRMCEYLGYEVVTLKRVRIMNVTLKGLKVGQWRHLTE
>UniRef50_B0T1Z8(49-251:501) Pseudouridine synthase n=1 Tax=Caulobacter sp. K31 RepID=B0T1Z8_CAUSK  E=3e-38 s/c=0.79 id=34% cov=79%
----------------------------------EPEATRVFRYHKPSGLMTTHNDPKQRPTVFQALPRdlPRLISVGRLDLNSEGLLLLTNDGALSRALEMPQNAWVRRYRARAFGDTTQAKLDKLKDGCTVEGVRYGPIEARL----------DKAQEKAGGGKNIWITLTLSEGKNREVRRVLESIGLKVNRLIRLSYGPFALGTLLPGQVEEV--
>UniRef50_A3JEU2(55-238:250) Pseudouridine synthase n=2 Tax=Marinobacter RepID=A3JEU2_9ALTE   E=4e-38 s/c=0.87 id=35% cov=72%
----------------------------------------YIMLHKPAGYLSATEDDT-HPTVLQLLPPglsQCLHIAGRLDRATTGLMILTNNGTWSRQLTLPGMGIAKVYRVTTAYPIGPDTPQRFAEGIWFeyEQLTTAPATLELLEP-------------------TLARLTIYEGRYHQVKRMFHAVGNRVIALHREQIGHLQLnSDLAEGNFRMLT-
>UniRef50_B6W7S5(38-222:231) Pseudouridine synthase n=2 Tax=Anaerococcus RepID=B6W7S5_9FIRM   E=2e-37 s/c=0.85 id=31% cov=72%
-------------------------------------------LNKPIGFISSNYDPHNKKDLNSLVKIDhRFFCAGRLDKDSHGLMLITNDGKITNKLIHPSKKIEKTYIVKVDKLLNKDDEALFRKGIKLSvNEKTSDAKINLIDENSKIY-----------------EVIIHQGFNRQVRRMFLYFGSKVIDLKRIKIGQIELGKLEDGKYKKL--
>UniRef50_Q11WC7(27-211:224) Pseudouridine synthase n=2 Tax=Sphingobacteriales RepID=Q11WC7_CYTH3  E=5e-37 s/c=0.84 id=32% cov=82%
---------------------------------------RYFIINKPFNMVSQFISSDAVNLLgnLDFTFPEGTHAVGRLDNESEGLLILTTNKKVTRLLFQGTKKHTRTYLVLVKNKVSEETLKQLQTGISIRvkgggNYISSPCEASIVTDAKAIYSYAADT--RENYPHTWLLLTLTEGKFHQVRKMVLAVNHRCLRLIRVSIENMLLHDLQPGAVKEFEE
>UniRef50_Q1H048(46-251:383) Pseudouridine synthase n=4 Tax=Betaproteobacteria RepID=Q1H048_METFK  E=1e-36 s/c=0.75 id=31% cov=72%
----------------------------------EPELPQVLLYHKPEGEIVSHDDPENRASVFDKLPRIRngkWIAIGRLDMNTSGLLIFTTSGELANRFMHPRYEVEREYAVRIFGELTEGEMAQLTYGIELDDGPANFDSIRPQGGEGA---------------NHWYEVILREGRNREVRRLFEAFQKPVSRLIRVRFGPVNL-------------
>UniRef50_Q5WE78(38-226:243) Pseudouridine synthase n=10 Tax=Firmicutes RepID=Q5WE78_BACSK   E=1e-35 s/c=0.80 id=40% cov=74%
----------------------------------------YLMLNKPAGVVTATEDARQ-KTVLDLMKNEwghmKPFPVGRLDKDTTGLLLLTTDGAFSHELMAPKKHIAKEYRALVEGKVTQADVEAFKNGVVLDDGYcTKPAQLEI----------------EESGPLSAISLELTEGKFHQVKRMFAAVGKKVIKLERIRIGSLLLDsSLPKGGYRELT-
>UniRef50_B9HLH3(172-385:397) Predicted protein n=5 Tax=Magnoliophyta RepID=B9HLH3_POPTR   E=2e-35 s/c=0.71 id=26% cov=76%
-------------------------------------PKIYIALNKPKGYICSLGEKESKsvmCLLDDYfqswdkrnpgLPKPRLFTVGRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRHLFAVSEGTVIEGVRCVPDSVELLPQQPDRPRP-------------RLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPsDLGLGKHAEL--
>UniRef50_A7HJ21(49-236:265) Pseudouridine synthase n=3 Tax=Thermotogaceae RepID=A7HJ21_FERNB   E=2e-35 s/c=0.80 id=27% cov=72%
----------------------------------KPNQFEYYVLHKPKDYVTTLFDPKQKKTIGELIKhiKTPLKPAGRLDKDATGVLILTNDGELIDILTNAKYRVKKEYIVKVKSVVSAEELVKLKKGIYDKGEFLKLEHFKIIE---------------KSSEYSIVRVELIKGKKHEIKRLFSSIGHNVLELKRISHGPISIS------------
>UniRef50_A9NFY3(33-223:236) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFY3_ACHLI  E=7e-35 s/c=0.78 id=27% cov=76%
----------------------------------------YILLNKPVGIVSTTNTAISGNMITFMNFKEKIFPVGRLDKDSHGLILLTNDGSIVNKILRVENGHDKEYHVTLNKPYDDYFIETMTSGVEI----YNPVA---HEKQMTMPSILKPLDERT------FSLTIRQGLNRQIRRMADSLGYRVESLERVRIMHLTLGDLPVGYWRYLT-
>UniRef50_UPI0001C37F9F(4-192:201) RNA pseudouridine synthase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37F9F  E=3e-34 s/c=0.78 id=30% cov=82%
----------------------------------------YYMFNKPQNCVTAKRD-AVHRTVMDFFPadlSERLHPVGRLDKDTCGLLLLTDDGDLDFRIMQPDRHVSKTYFFYAIGTMDDEKIRSLEKGISMVGFTSRPASFRLIRkyrisqlEEFFPSERRERYLKNPDGPAFAAELTIHEGKKHEVKRMLEAVHCKIFYLKRISIGGLSLDDsLAEGQYRPLND
>UniRef50_Q4AAG8(29-221:240) Pseudouridine synthase n=6 Tax=Mycoplasma RepID=Q4AAG8_MYCHJ   E=4e-34 s/c=0.76 id=24% cov=71%
-------------------------------------------LNKPKNYITSRFDPENRPTIMEFFsKNEYLFPVGRLDFQTTGLILITNDGKTTNKLLHPSSKIERTYLVKTDFSLSDKEIR------FLNDNKIQLDSVKSIQKIKKCSSRTYL-------------VTVWQGSNHHIKKLFLSISKKVLKLKRVSFANIKLDNISEGKYRKLT-
>UniRef50_C1TRI8(14-194:212) Pseudouridine synthase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRI8_9BACT  E=7e-34 s/c=0.80 id=32% cov=72%
----------------------------------------YIVMNKPKGYVCAVED-RFYPTVVGLLSPDlrakRIYPVGRLDRQSEGLLVLTNDGDFCNSLIHPSAGYQKTYEVLLGEALTEENLFSWRKGVPINGKVVSPVSIRVMDRKPAR---------------RWVSIVLQEGLKREIRIMASHFSLSVNVLFRRKVGRMELRKLKSGEY-----
>UniRef50_B3L0G1(128-317:328) Pseudouridine synthetase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L0G1_PLAKH  E=3e-33 s/c=0.75 id=31% cov=79%
---------------------------------------KWFVLHKPKGFLCTSNDEKDRASIYSLFPQDimdnyRLVSVGRLDRNTSGVLLLTNEYAWVNKLTHPKYQRIRTYRVHIEGPAQMKVLKQLATGIYLQDdnrgkenkkivkkKRTQPAFIEILREETIK-------VKDQVKKVSVLNISVREGRNRQIRKMFEQINQPVIKIKRTAFENITLKDVfFPKQYRELTQ
>UniRef50_C6XLQ6(60-237:247) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLQ6_HIRBI  E=7e-33 s/c=0.80 id=34% cov=60%
--------------------------------------------------------------------DPLLSPIGRLDKETSGLLLLTDDGQLNHRVSSPKTQTPKRYHVILDRDLNGDEDSIFAAGelmLESETKPLLPAELSALGKREAI-------------------LTLHEGRYHQVRRMFAAVGNHVNALHRESIGGLTLpEDLQQGQWRIMSE
>UniRef50_A5GM98(2-152:171) Pseudouridine synthase n=3 Tax=Synechococcus RepID=A5GM98_SYNPW   E=1e-32 s/c=0.94 id=58% cov=66%
------------------------------------------------------------------------YAAGRLDADSEGLLILTENGRLQQRLTDPRFGHWRTYWVQVEGLADHGHLAALEQGVVIKGQRTRPARATSLDSSFWfdLPERTPPIRERRTIPTSWLSISLREGRNRQIRRMTAAVGLPTLRLIRRSIDlmdggpPLSLEGLAPGQWRPV--
>UniRef50_Q87BI2(63-258:476) Ribosomal large subunit pseudouridine synthase B n=22 Tax=Bacteria RepID=RLUB_XYLFT  E=2e-32 s/c=0.72 id=35% cov=71%
------------------------------------EPARVLIYNKPEGEVTTREDPEGRPTVFETLPVlkgARWIAIGRLDINTTGLLLLTTDGELANAMMHPSSEIEREYVVRVrspegEEHVQDELLEQLTRGVMLEDGTAKFDTIERIG---------------NTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRYGSVLL-------------
>UniRef50_C1FHS6(63-234:248) Predicted protein (Fragment) n=4 Tax=Mamiellales RepID=C1FHS6_9CHLO   E=2e-32 s/c=0.81 id=38% cov=65%
-----------------------------------------------------------------------VFPVGRLDRDSSGLVLLTDDGRVPEALLDPSRKAPKTYEVDVRPAPTPDAIEALRDGVVI----TTTQQRDGVTTTSPTAPCPVDLIKKSETSAT-LRFELREGRNRQIRKMCEAVGVEVVRLHRVSVGGVWLDEsaLEVGGVRALS-
>UniRef50_C9RMP5(62-227:234) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMP5_FIBSS  E=5e-32 s/c=0.84 id=38% cov=60%
----------------------------------------------------------------------GIQSVGRLDADSSGLLLLSNQGDFIHKVESPKKGLWKKYRVTLARPFTDAQKAELLAGVMLKDER-RPVLAREIEVSGDA-----------------VDISIGEGLYHQVRRMFAAVGNHVETLERIAIGPVVLDrTLGEGGWRFLTD
>UniRef50_Q605S3(17-182:231) Pseudouridine synthase n=1 Tax=Methylococcus capsulatus RepID=Q605S3_METCA  E=5e-32 s/c=0.84 id=38% cov=70%
--------------------------------------TRVLLYHKPVGELVSRRDPEGRPLIFSRLPRlelGRWVAVGRLDVNTQGLILLTNNGELAHRLMHPSHAVEREYAVRILGTVSEAVIERLLDGVQLEDG---PARFESVAEAGG------------EGANRWFHVVVREGRNRLVRRLWESQNLVVSRLIRVRYGDIVL-------------
>UniRef50_C0BJ48(60-243:255) RNA-binding S4 domain protein n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJ48_9BACT  E=7e-31 s/c=0.74 id=22% cov=82%
------------------YQVKPTDEVKFDGARVQQTPPVYLLLNKPKGFVATSQGGKIVKSVQDLIrsavktPVPAVGDMGR---PMTGLLFFTND-EVLRKKLNNSKSIPMIYQVLLDKNVTTDMMRQLKEGQMVFEKMQKINEVSHMDGKSKKE----------------VGIEVHSLSPAIIVKLFAAVGCKVVLLDRITYAGLTKKELPRGNWRRL--
>UniRef50_B5YMC9(104-308:365) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YMC9_THAPS  E=1e-30 s/c=0.66 id=33% cov=75%
----------------------------------AEKTTRVWLANKLKGELITEDDPDGRPSMLQRLKANgtkhlptHLKPVGRLDMMTEGLMIFSNDGQYARNLELPSNHLWRTYRVRVHGRLTLGKLTAMRKGVTVRG--------------ASGEVVQSTGKDVNGSTNTWLQITCTEGKNRQLRRILGSMGLDVTRLIRISYGDYDLNSIPPG-------
>UniRef50_B8BQ39(161-358:370) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ39_THAPS  E=1e-30 s/c=0.68 id=34% cov=68%
----------------------------------------------------------------------GMHPVGRLDYDTTGLILFSSDGKLTQRLLHPRRGVEKEYVATVQGEVNASELrEMLANGVETTDgtfaanliavtssnGPSEVSEEDLNNVPEEDEGGDETTDEPYNGPYSDVRLVVSEGKYRMVRRILANSGHPVVELRRERHGEILLDDLPVGKFRDVT-
>UniRef50_B6AKQ9(72-256:298) Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AKQ9_9BACT  E=3e-30 s/c=0.72 id=36% cov=76%
-------------------------------------PPAVFAFNKPRGVLVTRTDPGGRETICESIgrssgqrtgmDMSRLMPVGRLDQASSGLILLTNRSSELTRLLNPALEFPREYRVQVRPSLKKRDWEMgLFGGKWARELGLKPVDVRY---------------EKENLRTTWLRVGLKEGKNREIRRLFESGGYEVLHLIRVGFGPFCLKNLPPGGIVEVS-
>UniRef50_B5JX71(28-224:231) Pseudouridine synthase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX71_9GAMM  E=4e-30 s/c=0.68 id=31% cov=75%
----------------------------------EPRQPRYFMLHKPPECISARSTEEHLGAL-DLIEEPfhdELHIVGRLDLDTTGLLLVTDDGQWSQRLRSPRHKVPKVYWVTTAKPIASTVAARFEAGIYLktEDHTTAPAQLDVVAE-------------------CRARLTITEGKFHQVKRMFAAVDNEVTALHRASVGEIVLDeDLEPGEYRALT-
>UniRef50_C3XG49(75-247:267) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XG49_9HELI   E=7e-30 s/c=0.76 id=28% cov=77%
-----------------------------------------IVYHKPKGELVSKKDSYGRKLIYDSLNARyaHFMPVGRLDFASEGLLILSDSKEVVSKLMH--SNLPRTYILKIDSHITKQMIKAMEEGLTLQNAKAGGHRLSKIKTMEFMPMEYEII---KSASISKLKVRISEGKNRELRRFFAHFNANVLDLRRVSYGFINLNALPVGKTR----
>UniRef50_B2S355(44-245:261) Putative uncharacterized protein n=2 Tax=Treponema pallidum RepID=B2S355_TREPS  E=1e-29 s/c=0.65 id=25% cov=73%
---------------------------------------RYVLLYKPVGYICSLAPqfpagyahtqvragpsKQEYARAIDLVQPayqERLYHIGRLDVRSEGALLFTNDGSFAQALGHPRSGIEKEYIVETREPVPAALLSSFVRGVWVEGCRYRCVRARHLAAQC-------------------VQLVLVEGKKREIRVVFEAWGQDVVRLVRVRIGRVRLGPLRPGAFRTM--
>UniRef50_C1N350(37-227:230) Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N350_9CHLO  E=3e-29 s/c=0.68 id=32% cov=76%
---------------------------------------------KPRGVTCT-TDARDRTNIVDAVnyPDARLFPVGRLDKDSTGLILLTSDGRLPNAALRSGRKRDKKYLVVVDAVVRPEDVRMLRDGVVIS-TPVQRDRVDRVLTARTLPCEIDVVGART------LEITLREGRNRQIRRMLDAVGYRVINLHRTEIMGIGLRGTREGRWVECDE
>UniRef50_O51155(30-227:249) Uncharacterized RNA pseudouridine synthase BB_0129 n=22 Tax=Borrelia RepID=Y129_BORBU  E=4e-29 s/c=0.66 id=25% cov=71%
----------------------------------------YLALNKPRNYLCSNFDVDGRKlaiSLVQPLFKERVFSIGRLDFKSSGLLLFTNDGKFANDIIHPRQKVEREYIIESKKDIDENLLISFKSGIKVKKEFFKLKSYEILNKNSA-------------------RLILDEGKNREIRKVFLSKNIFLKKIHRIRIGNINLDSLKEGQVK----
>UniRef50_C5KUW6(22-182:182) Ribosomal large subunit pseudouridine synthase B, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUW6_9ALVE  E=1e-26 s/c=0.75 id=29% cov=72%
----------------------------------------LFAFFKPRGMETTCTAGSG---LRKFLDRGRLHPVGRLDRDTTGLLLLSSDGDCTNRILH--STINKTYAALVRGVLPEGLMKKvVSEGVDLPDGHVDVTRLETINDGDTVPfgLVAYPLSSIPTNGCSMVRITTTCGRNRVVRRTLCALGHPVLLLHREEIG-----------------
>UniRef50_D2VWU1(30-241:244) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VWU1_NAEGR   E=3e-26 s/c=0.57 id=32% cov=76%
--------------------------------KPFPFPTlnLTIALNKPESYLCSTQREsSNHKIIYDLLPPeflnrnPTLGNVGRLDLDSCGLLIMTQDGDLHHRILSAD--VEKTYLV--------EFVPPIESDVELNQMKELFFSGDLQLRSED--STLKPITNFEYINPSTISISIVEGKYHQVRRMFAACSKRVVGLKRIKIGDLTLEGLN---------
>UniRef50_Q6AR36(32-219:230) Related to pseudouridine synthase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR36_DESPS  E=1e-25 s/c=0.63 id=28% cov=71%
--------------------------------------KKVLLFHKPEAVDCSLAPSKTTKTLLDFdFGTDRVFPVGYLDQASEGILLLTNDGEIANKLSLPEFRPEDEYLLTSPEEIDAEMIEKLTQ--------------------ARKAEKNKSVVDIEQIDAKHLRILQQGGRSKDIKKMCEAVELVIEQLVRVRVGNITLEGLEKG-------
>UniRef50_A1WC28(39-260:266) RNA-binding S4 domain protein n=5 Tax=Comamonadaceae RepID=A1WC28_ACISJ  E=1e-23 s/c=0.50 id=24% cov=55%
-----------------------------------------------------------------------------LPTEASGLVVYTQDRRVARKLQEDIETLEQECIVEVAGQIADGGLQKLCHGLSFNGRPLPPIKVSWQSE-------------------TRLRFALKGIRPGQIPAMCEAVGLSVRAIKRIRIGRVPLAKVPEGQWRYL--
>UniRef50_Q1N5G6(9-190:236) Pseudouridine synthase n=1 Tax=Bermanella marisrubri RepID=Q1N5G6_9GAMM  E=5e-23 s/c=0.60 id=23% cov=62%
---------------------------------------------------------------------KHVFPVHRLDRPTSGVLLFGFSGEIAQQVQAQWEQANKTYWAVVRGWLKEQTLvdHALKGMADYGQDVEIVQEAQTHFKPIDYVEIDAEIDRYPKSRFSWVEAKPKQGRTHQIRRHLKHLSHPIIGDARYGKGKYN--------------
>UniRef50_C5TPY8(30-210:264) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=C5TPY8_NEIFL   E=2e-22 s/c=0.60 id=30% cov=71%
------------------------------------RDSRTIAVNKPAGMLVHRSwlDKHetrfAVQTLRDQIG-QHVYPVHRLDRPTSGVLLFALDTEAARLLTQQfeNKTIEKTYWAIVRGYLPSDGLIDYAlkyMPDKIAEAQTEATLQEAQTAYRCLAQTELPFQSALRYPTsrySWAELTPYTGRKHQLRRHMKHIFHP---------------------------
>UniRef50_C0MA80(78-255:300) Pseudouridine synthase n=6 Tax=Streptococcus RepID=C0MA80_STRE4   E=3e-22 s/c=0.60 id=28% cov=57%
-------------------------------------------------------------------PNKQVHIVTRLDRDTSGLMLFAKHGYAHARLdkQLQQRAINKRYYALVCGQERLPDQGEIIAPI---GRTDDSIITRTVTPKGKYAKTSYKVIARYPENVSLVDITLHTGRTHQIRVHFAHLGFPLL-------------------------
>UniRef50_Q21ST9(44-256:262) RNA-binding S4 n=15 Tax=Proteobacteria RepID=Q21ST9_RHOFD   E=8e-22 s/c=0.49 id=20% cov=57%
-----------------------------------------------------------------------------LETAASGLVVFTQDWRVLRKLTEDAQLMEQEVIVEVAGEVPAQSLQRINQGLAVDGQPLPAVKVSLNS---------------TGETSSKLRFALKGSHPGLIAYLCERLGLQIVSMKRLRIGRVSMTQLPLGQWRYL--
>UniRef50_B9XBT8(28-222:260) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XBT8_9BACT  E=1e-21 s/c=0.54 id=18% cov=70%
----------------------------------------LLVINKPAGLVCHPTKGDEYSSLISRVrlhlgPESHPHLVNRLDRETSGIVIVAKDDTTARGLrrIWEGREVQKEYLAIVHGHVREEQGTiQAALGKDTSSIIAIKDTVVEGGAASQTDFTVKKRFSREEGDFTLLRVLPHTGRKHQIRIHLAHIDHP---------------------------
>UniRef50_A3RGY8(72-280:353) Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=A3RGY8_9BACT  E=3e-21 s/c=0.49 id=25% cov=69%
-----------------------------------------LVLNKPPKLVVHPAAGHWSGTLLNgllayaptLIDVPRAGIVHRLDADTSGLMVVAKTLAAQTDLvrQLQSRTVTREYWALVLGVPSQRGVIDAAIGRDPRNPLRFKVSTTEAAKPARTHYATLDSTKNAGADISWLACRLETGRTHQIRVHLEHVGHP---------------------------
>UniRef50_C6P790(148-266:272) RNA-binding S4 domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P790_9PROT  E=5e-21 s/c=0.87 id=27% cov=53%
-----------------------------------------------------------------------------------GLTVFTQDYRVIRKLTEDAATIEQEYVVEVAGELVPDGFKLLNHGLSFNGKPLPPVKVSWQNE-------------------THLRFALKGAQPGQVAHMCLAVGLQVQAMKRLRIGRMSMCKLPLGQWRYL--
>UniRef50_Q45826(93-257:316) Uncharacterized RNA pseudouridine synthase Caur_0901 n=5 Tax=Chloroflexi (class) RepID=Y901_CHLAA  E=7e-21 s/c=0.62 id=28% cov=50%
----------------------------------------------------------------------------RLDRDTSGLLVIARHDQAMRSLvdQQQARRMRKIYQALVIGRPPETGT------IDAPIGRDPRDRLRMAVVPDGRPARTHYRLLDTFGDYSLLEVQLETGRTHQIRVHLRHLGYP---------------------------
>UniRef50_B8CQ92(1-201:278) Pseudouridine synthase n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ92_SHEPW  E=7e-21 s/c=0.51 id=23% cov=57%
----------------------------------------------------------------------HVFPVHRLDRPTSGILLFAKSSEMANALCeqFAAHSIDKEYLAIVRGNMHEAatldyALKEELDDVADKDVDPNKAAQDAITSYKPLLNSEIPYASGRyaTSRYALVHLSPHTGRKHQLRRHMAHLRHPIL-------------------------
>UniRef50_C8QZ10(95-279:324) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZ10_9DELT  E=8e-21 s/c=0.55 id=26% cov=52%
----------------------------------------------------------------------------RLDKDTSGCLVVAKNDLAHHNLVQQfkGREVEKTYQALLRGILAEDTGQVV---LPIGRHPVHRKKMAVRREGGREAVTHWRVRQRFSAGYTLVELLLETGRTHQIRVHMAALGHP---------------------------
>UniRef50_Q28K21(12-184:217) Pseudouridine synthase n=11 Tax=Proteobacteria RepID=Q28K21_JANSC   E=9e-21 s/c=0.59 id=25% cov=61%
------------------------------------------------------------------IAFPEVLLVHRLDMDTSGVMVFARTPHAQRHlgLQFEKRHTKKAYVARVWGEVTDKDGHI--DLPLIVDWPNRP--LQHVNHETGKPAQTDWRRIRVEDGTTRMRLFPKTGRSHQLRVHMLAIGHPILGDPFYATGP----------------
>UniRef50_A0L7F8(10-178:255) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=A0L7F8_MAGSM   E=1e-20 s/c=0.60 id=32% cov=53%
--------------------------------------------------------------------------AHRLDRDTSGCLVLGRHAKALSKLgkLFSQGKVQKTYWAVVQGGPPQAQGSM---DFPLYKISTAQQGWRMVVDPEqGKSSLTLYRVLGRSATHSWLELTPKTGRTHQIRVHCAHVGLP---------------------------
>UniRef50_C0FY60(27-245:294) Pseudouridine synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FY60_9FIRM  E=1e-20 s/c=0.46 id=22% cov=87%
--KLFLSDETFEKFSGKdetNSGYMKLKSIDSGRLQVVYEDDDVIIINKPSGMLSQkavPEDISANEYILSYLIRKGAlseeqfktfkpSICNRLDRNTSGLLIAGKTLKGLQTMAEAlkKRTVQKYYRCIVKGELREKtHLKGYLSKDEQNNKVKVVSHIRPEEKADYLPIETEYRPVAVSNGYTELEVHLITGRSHQIRAHLASIGHP---------------------------
>UniRef50_A7VVQ2(84-239:298) Pseudouridine synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVQ2_9CLOT  E=4e-20 s/c=0.64 id=21% cov=67%
----------------------------------------LLILNKPPLMPVHPCPGHDRGTVCNFVsyyqkrkgEDWRFRPLNRLDKDTSGLVIGAKDSYTASAL----NDVGKTYFAVCQGSLPGEGV--IDTPIRLKEGHSIQREAGEGGKPAVTHWKSLAQGAAAGKSYTLLALTLETGRTHQIRVHLSSIGHP---------------------------
>UniRef50_B8CWB7(79-259:310) Pseudouridine synthase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWB7_HALOH  E=5e-20 s/c=0.55 id=21% cov=69%
----------------------------------------LLVINKPANMLVHPTPVEKSNTIVNGVlyhmrnqgNYNLVRPIHRLDRNTTGLLLIAKNQYAHNYITHqfQNNNIHREYLAFVHGNV-EFKKESINAPI---GKTRDSLIKRKVDHTLGKRAVTHIKVVKPGGLISLIRVKLETGRTHQIRVHLSHLGHPLL-------------------------
>UniRef50_Q3AD19(78-241:301) Ribosomal large subunit pseudouridine synthase, RluA family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AD19_CARHZ  E=6e-20 s/c=0.61 id=24% cov=53%
---------------------------------------------------------------------EGFYPIYRLDRNTSGPMLIAKFSLIAEMLNNslRKRQINKIYLALIEGPLADKsGIINLPLGL-LEGSIIKRAVV-----PGGQPACTKYQTVKAFPTHTLLKVELLTGRTHQIRAHFAAIGHP---------------------------
>UniRef50_Q1MQ60(84-263:541) Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQ60_LAWIP  E=6e-20 s/c=0.55 id=23% cov=50%
----------------------------------------------------------------------------RIDKDTSGLLCIalTEDTRLKLSKIFLDRKINKEYLALVHGVPS------MEGYIAVPLGRDPKTKVKVAVNPKGKPAHTEWRVLHRGKNdvYSILALTIQTGRTHQIRVHMKHIGHP---------------------------
>UniRef50_Q47417(117-299:376) tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC  E=8e-20 s/c=0.54 id=27% cov=56%
---------------------------------------------------------------------QHVYTVHRLDRPTSGVLLLALSSEVARALSQQfeSHQMQKTYHAVVRGYVLDDGVIDYALTEELDkiaDKFTNPDKApqPAVTHYRSLAQAEMPVAIGRypTARYSLMELKPQTGRKHQLRRHMSHIHHP---------------------------
>UniRef50_Q2LWV4(87-254:333) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWV4_SYNAS  E=8e-20 s/c=0.59 id=25% cov=51%
----------------------------------------------------------------------------RLDKDTSGLLVVAKTDAAHQGLAlqFKKHQVGKTYQALVYGDPREKTGQI---DLPVGRHPVERKKMSTKSRRGKEAATRWRIAERFGV-ATLLNVDIVTGRTHQIRVHLAAIGHP---------------------------
>UniRef50_A4J479(74-249:303) Pseudouridine synthase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J479_DESRM  E=1e-19 s/c=0.56 id=24% cov=68%
----------------------------------------LLAVNKPPGMLVHPLTNETSGTLANGVlyhwlqqgTIDRFRPVHRLDRNTSGIVLIARNPYVQQQLQIQMKqgQFVRRYLALVKGKVQPEQG-VIQAPIALEEG----SFIKRMISPAGKEAISHYQVLRTFNQASLVRVELETGRTHQVRVHMAHMGHPLL-------------------------
>UniRef50_C0GNZ6(93-260:535) Pseudouridine synthase, RluA family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNZ6_9DELT  E=1e-19 s/c=0.59 id=26% cov=53%
----------------------------------------------------------------------------RLDKDTTGLMVAALNQEAKEDLAgqFAGRRVHKTYLALVCGALKQDEGII---NVPLARDQQSRARVAPSREGRSARTAYKVLKRDPSGLWSLVQVQIFTGRTHQIRVHFSHLNHPVL-------------------------
>UniRef50_C6VRD0(72-244:300) Pseudouridylate synthase n=4 Tax=Lactobacillus RepID=C6VRD0_LACPJ   E=1e-19 s/c=0.57 id=20% cov=53%
-----------------------------------------------------------------------VHITTRLDRDTSGIVLFAKHHFAHSIIDHQlkAHAMRKMYLAVVSGELTTDHGW-----LDAPIGRAADSFIKRTTRPDGKPSLTEYWVVKRLCNMTVVRVRLHTGRTHQIRVHFAASGHP---------------------------
>UniRef50_B5JL25(15-189:249) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL25_9BACT  E=1e-19 s/c=0.57 id=25% cov=70%
---------------------------------------RLVAIHKPSGLLVHRSPIDRRETrfaiqlLRDQIG-QHVYPAHRIDRPTSGILLFGLDEAAgtALSLLFQNREIQKNYLAVTRGHLPESGLidSPLHKYEDADGHIKSSetQEAETAYRRLATTELPYPTERYDTTRYSLVELTPHTGRRHQIRRHLAHIRHP---------------------------
>UniRef50_B9JWI8(72-270:330) Pseudouridine synthase n=1 Tax=Agrobacterium vitis S4 RepID=B9JWI8_AGRVS  E=2e-19 s/c=0.49 id=26% cov=70%
---------------------------------------KVFVLNKPAGLAVQGGSGLNRHIdqmLEAWTSKKGEKPrlVHRLDRDTSGVLVVARTRGAAQKLTaaFRERDTKKTYWALVKGVPRkhDDKISTWVVKEQTEDGDRMRI-ARHGEDGADHAVSYYRVLETAAQSLAWLEMEPYTGRTHQLRLHALHIGHP---------------------------
>UniRef50_B5JG19(15-184:262) RNA pseudouridine synthase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG19_9BACT  E=2e-19 s/c=0.57 id=22% cov=38%
----------------------------------------VLLINKPALLVCHPSKNGPWSSLAgacrEYLQSERSHLVSRLDRETSGIVLFAKHRLKSRHLQMAleQRKVSKTYLAILEGELKEETL-----------------------------------------------------------------------------------------------
>UniRef50_D2L0S2(71-261:558) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0S2_9DELT  E=2e-19 s/c=0.51 id=26% cov=53%
-------------------------------------------------------------------------IVHRLDKDTSGLLMvaLTEPVRLALAADFAARQVHKTYLALVHGRPDGKGGD-IRLPIG-RDPKYRTKMAVPHKGGRPAHSRWRPVWTAPDGTASLLEVTIFTGRTHQIRVHMAAIGHP---------------------------
>UniRef50_C4Z9Y6(60-280:324) Pseudouridine synthase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9Y6_EUBR3  E=3e-19 s/c=0.44 id=23% cov=72%
----------------------------------------ILAANKPVNMLSQKSKEtdisANERLIGYLIKEGKLdfdtyksfkpSVCNRLDRNTSGLILMGKSLHGLQYLSQvlKARTAEKYYMALVAGEVDEPM---TIEGFLTKDEAVNKVQITREPISDESLPIKTAYRPLKTIdmsaschKATLLEVHLITGRSHQIRAHLSSIGHPI-------IGDIKYGD-----------
>UniRef50_A8IAL9(123-312:384) Pseudouridine synthase n=2 Tax=Xanthobacteraceae RepID=A8IAL9_AZOC5   E=3e-19 s/c=0.51 id=23% cov=69%
----------------------------------------VLVLNKPSGIAVQGGSGTFRHIdgMLDALrakDGQKPRLVHRIDKDTAGCLLIAKNRLSAAQLAknFRSREARKIYWALVPGVPKPRQGR-ISTYLAREEAEERMRVARHGEEDASHAVTYYAVVEHAAQKMSWLSLKPVTGRTHQIRAHLAHIHHP---------------------------
>UniRef50_C9M5C8(31-218:276) Pseudouridine synthase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5C8_9BACT  E=5e-19 s/c=0.52 id=23% cov=67%
----------------------------------------VLVINKPAGLLSQP-DTKGEDSVatralgYASDPAFGAQLVHRLDRNTSGVMILALDGQALRSLMvcFKERTANKTYLALVSGQLPPSG--QIDAPLLKD-----PDKKLVRVASNGERAVTRFRRLATDGQFSLAEVEILTGRTHQIRVHMNHIGHPIL-------------------------
>UniRef50_A9BZ16(56-230:319) Pseudouridine synthase n=9 Tax=Burkholderiales RepID=A9BZ16_DELAS   E=5e-19 s/c=0.55 id=30% cov=55%
----------------------------------------------------------------------HVYPAHRLDKGTCGVLVMALHAQAAQRLgqAFAGQEVRKQYLALVRGWLPDavEVDHALRPDDAPEDAPAQPAQTSLRCLARLEWPEAFDPR-HAATRISLVEALPATGRRHQIRRHLKHVAHP---------------------------
>UniRef50_C6VN18(78-244:293) Pseudouridine synthase n=3 Tax=Lactobacillus plantarum RepID=C6VN18_LACPJ  E=5e-19 s/c=0.58 id=25% cov=52%
----------------------------------------------------------------------------RLDRDTSGLVLVAKHRVAQGMLTEPRiaAQLVKTYQAWIEGTITPASGT-----IDRPIGRVADSPRRVVTTAGQRAITTYQVEADQlQHNVSRLRLELVTGRTHQIRVHLTALGHPLL-------------------------
>UniRef50_B8FLB4(84-265:321) Pseudouridine synthase n=2 Tax=Bacteria RepID=B8FLB4_DESAA   E=8e-19 s/c=0.53 id=20% cov=52%
----------------------------------------------------------------------------RLDKETSGVILAAKNDAAHAGLSEQlaQRRVEKFYLALAHGVIKEDTGVI---DLPLARHPSDRKRMHVSTPAKGREALSLWTVKERFLDATYVKVQIKTGRTHQIRVHLAALHHP---------------------------
>UniRef50_D0RNQ1(101-247:288) Pseudouridine synthase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNQ1_9RICK  E=9e-19 s/c=0.65 id=26% cov=48%
------------------------------------------------------------------------YIVHRLDKDTSGLMLLAKNRFYAKKFseMFKSREVKKKYLVIINGKIKKNKGEIHSK--------------EKVNGKEIESKLYFEVISKKN-NFSYLEIDLITGRKHQIRKQFSDIGHP---------------------------
>UniRef50_C5CMM5(38-232:237) RNA-binding S4 domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CMM5_VARPS  E=1e-18 s/c=0.49 id=22% cov=74%
--------------------------------KPEPVVPVTLLLHKPAGMatdtahrlLVAANHHEPERAGMRFLPAHAKaqRCMTPLETGASGLVVYTQEWRIERKLQEDAGVLEHEVMVDVSGKLSPEQLVRFER---------SPARVSI---------------GRQADEQTGLRFALKGARPGQIAHLCDEAGLRILAMRRIRIGRVPLAGLEPGQWRYLS-
>UniRef50_B0TGQ0(113-281:369) Pseudouridine synthase n=44 Tax=Bacteria RepID=B0TGQ0_HELMI   E=1e-18 s/c=0.56 id=30% cov=21%
----------------------------------------------------------------------------RIDKDTSGLLVVAKNDRAHIHLTEQvkDHRVRREYLAVVHGVIGAET------------------------------------------------------------------------------------------------
>UniRef50_C4XSN0(102-263:554) Ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSN0_DESMR  E=2e-18 s/c=0.59 id=24% cov=52%
----------------------------------------------------------------------------RLDKDTSGLLLVaqTESARLALAADFAERRVAKTYLALVHGRPERSDGVI---ELPVGRDPKHPTKMAVVAKGGREAKSSWKLAWTApDGTASLLEVAIATGRTHQIRVHMAAMGHP---------------------------
>UniRef50_Q7VI73(80-260:303) Pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI73_HELHP  E=2e-18 s/c=0.52 id=26% cov=39%
----------------------------------------------------------------------------------------------------------KTYYAIVEGKLTQECL--IDEPIALQKYKGTDLSIKSIISPYGKPSRTKLYPLAYHSPTdsTLIRVLPLTGRTHQIRLHCAHIGHRIL-------------------------
>UniRef50_A8H661(101-260:305) Pseudouridine synthase n=7 Tax=Shewanella RepID=A8H661_SHEPA   E=2e-18 s/c=0.59 id=23% cov=62%
---------------------------------------QYSVWYKPFGMRCQGSKWSDHTTINRFIetqltPPRNAYIIHRLDLAATGLIVLGHTKKVTAAIAQlfETRALDKFYQVIVEGKFPEGQ-----------------VTINTDVDNKKALSHAHILEYNSELNQSKVQVKIESGRKHQIRIHMASLGHP---------------------------
>UniRef50_A5WCP4(126-321:364) Pseudouridine synthase n=15 Tax=Moraxellaceae RepID=A5WCP4_PSYWF   E=3e-18 s/c=0.48 id=24% cov=54%
----------------------------------------------------------------------------RIDKDTSGLLMIAKKRSTLKVLQEylREKTIQKHYLCLVKGQPALNEFEIdaplLRYTVANGERRVKVDKANPEAKLSQTTCKVLARFKMNGEPVSLIEAMPHTGRTHQIRVHLAYLGHPIL-------------------------
>UniRef50_UPI000178A5E6(68-247:302) pseudouridine synthase, RluA family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A5E6  E=3e-18 s/c=0.52 id=24% cov=67%
-----------------------------------------LVVNKPAGLAVHP-DNESRETtlnhvVAAYYEAEGIHAavrhIHRLDKDTTGPVLYAKNEYAQLKLdeAMREKKIVRMYAAIVQGRVSQELKR-----IDLPIGKDRYHASRRRVSLTGQAAITHILSAEAYPKASLLHIRLETGRTHQIRVHLSHMGHPLL-------------------------
>UniRef50_Q7UHX8(58-269:334) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UHX8_RHOBA  E=3e-18 s/c=0.44 id=21% cov=54%
-------------------------------------------------------------------------IVHRLDRDTSGVIVVAKNNAVHLNLAAQWHDrlVQKEYTAITFGRLDRD--RDWIHA-SIGRHPYQRDKQAIREgHATSKTASTFYEVVERHGRVTRVDVRPKTGRTHQIRVHLAHIGCPIL-------------------------
>UniRef50_B2S2H8(8-167:216) Pseudouridine synthase n=2 Tax=Treponema pallidum RepID=B2S2H8_TREPS  E=5e-18 s/c=0.58 id=23% cov=51%
-----------------------------------------------------------------------LFPLHRLDKDTAGVLLFAKHARAAALYqgILGSMRVIKRYRALCFGRPPRECGD-----IRVPIRTGTAARRRQVVR----AAHTAYRVLRATDTHTYLELTLHSGRTHQIRIHLAALGCP---------------------------
>UniRef50_C1ZB48(83-268:325) Pseudouridine synthase, RluA family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB48_PLALI  E=5e-18 s/c=0.50 id=27% cov=50%
----------------------------------------------------------------------------RLDRDTSGAMAICKE-HLSHRLLSIQFQlgrISKSYLALVEGVLTDDQLV-----IDLPIGRAPGCSSALMscraDALEAQASKTSLRVVERFPQHTLVEAKPRTGRMHQIRIHLATIGFP---------------------------
>UniRef50_C7GZW0(99-262:318) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZW0_9FIRM  E=6e-18 s/c=0.57 id=23% cov=52%
----------------------------------------------------------------------------RLDMDTTGLLMIAKNQFIQNAVVSemKRGNVEKRYLAVVHGLPCNREGIIDAPIKAVEGEPRR----QVMEGGKPSITEYKVVGVSDELNVSFLDVRLHTGRTHQIRVHLKHIGCPIL-------------------------
>UniRef50_C2W5F3(71-252:307) Pseudouridine synthase n=4 Tax=Bacillus RepID=C2W5F3_BACCE   E=7e-18 s/c=0.51 id=22% cov=66%
----------------------------------------VLIVNKPAHMDTHPSNKGGTGTLANLVAFHlqmqgvetKVRHIHRLDKDTTGGVVFAKHG-IAGVIMDRllmERNIKRTYLALVEGKVRK------KQGIIDEaiGRDRHHATRRRVSQKGDRAVTHYKIeKYFKKQDVTLVTLQLETGRTHQIRVHMSHSGHP---------------------------
>UniRef50_D1VV86(49-249:300) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VV86_9FIRM  E=7e-18 s/c=0.46 id=22% cov=67%
----------------------------------------LLIVNKEYNCVTHTAKDDSKDTLLNYLAgyfeknniKRKVRFVNRLDRDTSGLIIVAKNSYAHAKIMDEfsNNQVDKIYLAICRGDFKEKQGEIVKKISLCQDGIRRE-----VDDDNGKYAKTKYQVLKDNKKLALVKLKLFTGRTHQIRVHLKSIGHP---------------------------
>UniRef50_D2QPA6(13-182:244) Pseudouridine synthase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPA6_9SPHI  E=9e-18 s/c=0.55 id=27% cov=71%
------------------------------------QDTELVAINKPHGLLVHRSmiasdaSEFAVQLLRDQLG-QRVYPVHRLDRKTAGVLLFALSESMNAIMQQQfmEGAVQKTYLAIVRGY-TPDELTIDYPLCKDDGNGAVGVLQEAVTHLKTLRQTEIPVAFGKhpTSRYSLVELTPTTGRMHQLRRHMAHILHP---------------------------
>UniRef50_B4RVP9(13-202:265) Pseudouridine synthase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RVP9_ALTMD  E=9e-18 s/c=0.49 id=26% cov=70%
------------------------------------QDEHIIAIDKPPGLLVHRSPIDKHETVFavqtlrDQIG-QHVFPAHRLDRPTSGVLVFSFSADTAAKLGKQmmDKQVVKQYHAIVRGFVHhtgyiDYALKYRYD--KIADKHKRPQQppqpASTMYESLAKFDVPEPVGRYQSARYSLVRLSPSTGRKHQLRRHMVHIRHP---------------------------
>UniRef50_P54604(85-248:302) Uncharacterized RNA pseudouridine synthase yhcT n=5 Tax=Bacillus RepID=YHCT_BACSU  E=1e-17 s/c=0.56 id=21% cov=54%
-----------------------------------------------------------------------VRHVHRLDQDTSGAIVFAKHRLAHAILDQQleKKTLKRTYTAIAEGKLRTKKG-TINSPIGRD--RSHPTRRRVSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRVHLASLGHP---------------------------
>UniRef50_Q31IZ8(6-191:252) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q31IZ8_THICR   E=1e-17 s/c=0.50 id=24% cov=55%
-----------------------------------------------------------------------VYPLHRLDKATSGLLLFALDSNTARLMgqQFEEHTIQKHYLAICRGWTAEhgEIDHALKHKLDkLGDRHAQtnkpPQEALTNFERLATTDVMHKIGKFDSQRYSLVKLMPKTGRKHQLRRHLNHISHP---------------------------
>UniRef50_C1FEQ4(76-282:357) Predicted protein n=2 Tax=Micromonas RepID=C1FEQ4_9CHLO   E=1e-17 s/c=0.44 id=26% cov=26%
----------------------------------------LVVVNKPPGMVVHPSAGHAGGSLVNallfhcnersnrgddaskMIDVPRLGVVHRIDKGTSGLLVMAKDAAAQA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_UPI0001C36F41(61-250:446) hypothetical protein RflaF_04377 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36F41  E=1e-17 s/c=0.48 id=25% cov=65%
----------------------------------------VIVFNKPSGMPVHPSIKHQGDTLGNkfaaMFPDLTFRAVNRLDRDTSGLCVVAKNAL---AANALQGRCEKVYYAAVTGEIPETGT------IDAPIARERESIIIRCVREDGQRAVTHYRRIAYNGRYSLAEIHLETGRTHQIRVHFSYIGHP---------------------------
>UniRef50_Q2W2D5(225-446:505) Pseudouridine synthase n=39 Tax=Bacteria RepID=Q2W2D5_MAGSA   E=1e-17 s/c=0.41 id=22% cov=53%
-------------------------------------------------------------------------IVHRIDKDTSGLLVAAKTDAAHRGLAtqFAAHTLERAYWALVWGTPSPRQGEI--EGNIGRNPNDRKKMAVVKSGGKPALTRYRVLKSFAGGAVSLVECRLATGRTHQIRVHMTTQGHP---------------------------
>UniRef50_Q6MMV3(52-219:290) Pseudouridine synthase n=2 Tax=Bdellovibrio bacteriovorus RepID=Q6MMV3_BDEBA  E=1e-17 s/c=0.55 id=23% cov=56%
---------------------------------------------------------------------QHVYPVHRLDAGTSGVLLFALSSESASKLCrlFTERATHKTYQAVVRGFVKEEGEVQL--PLELDSTGDLVDAHTSFKRLATVEFPVAVGKKFPTARYSWVEVTPHTGRYHQIRRHFNRISHPLL-------------------------
>UniRef50_A5ZQH2(26-213:288) Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQH2_9FIRM  E=1e-17 s/c=0.49 id=22% cov=69%
--------------------------------------TDILLINKPAGMLSQPDDTKEPSMVEYLIgyllqngslteeNLRTFHPsvCNRLDKNTSGVIAAGKSLAGLQELstLFHDRTVHKDYLCIVKGKLTRS---RHIRGYLHKDANLNKVSVSPTKEKDAQPIETQYTPICNNEHATLLKVRLITGRTHQIRAHLASEGHP---------------------------
>UniRef50_C4KBT4(3-196:648) Transaldolase n=2 Tax=Proteobacteria RepID=C4KBT4_THASP   E=1e-17 s/c=0.47 id=30% cov=55%
-----------------------------------------------------------------------VYPAHRLDRGTSGVLLFALDREVARTLAQRfeAQAVDKRYLAVVRGHPPehgviEHALVRRLDAVEVRSGKgagardALPEDVDDSDSPEAAEPVAQPARTRfrrlatvelphavdryPSSRYALVELLPETGRRHQLRRHLKHIAHP---------------------------
>UniRef50_Q1PXB6(44-216:274) Pseudouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXB6_9BACT  E=1e-17 s/c=0.53 id=27% cov=59%
-----------------------------------------ILFNddcyvivsKPPGIVTngQNSIERDLRT---QFNRDRIQAVHRLDKDTSGALIFAKNENAFEEMkkVFKKHDIQKIYRVIVTGKICEPA-------------------FTINSPVGGQTAVTHITLLKKGKNTSYLEVATETGRRHQIRIHLASIGHP---------------------------
>UniRef50_C5VRN0(85-247:302) Pseudouridine synthase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VRN0_CLOBO  E=2e-17 s/c=0.56 id=22% cov=53%
-----------------------------------------------------------------------VRLVNRLDMDTSGLVLIAKNAYSHMALSRDMQKddFVKKYLAIVHGNFNEDSG-VIDKPIYRVGEGTL----KRIIDERGQRSITLFKVIEQYKNASLVELTLETGRTHQIRVHLSSIGHP---------------------------
>UniRef50_B2A2J2(93-262:328) Pseudouridine synthase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2J2_NATTJ  E=2e-17 s/c=0.54 id=25% cov=53%
----------------------------------------------------------------------------RLDKDTSGLLVVAKQNETHDILSEeiKNRRVARTYLALVIGDFSKKKATiDLPIG---RDPRNRKKMAVVHGGKRAITKVEMLRSFQNPEKISYLKCSLETGRTHQIRVHLSHLGYPLL-------------------------
>UniRef50_C0X7U3(79-246:297) Pseudouridine synthase n=21 Tax=Enterococcus faecalis RepID=C0X7U3_ENTFA  E=2e-17 s/c=0.54 id=35% cov=22%
-----------------------------------------------------------------------IHVVTRLDRDTSGLMLFAKHG-FAHALIDqelREKKVTKIYYALVGGAIEQ--------------------------------------------------------------------------------------------------
>UniRef50_A5ZQM9(88-274:334) Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQM9_9FIRM  E=3e-17 s/c=0.49 id=27% cov=21%
-----------------------------------------------------------------------IRPIGRLDKETSGIVLFAKNQVAAQRLQEQRETgvLEKQYLALVDG------------------------------------------------------------------------------------------------------
>UniRef50_D1RB93(34-237:283) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB93_9CHLA  E=3e-17 s/c=0.44 id=22% cov=68%
----------------------------------------LVVIEKPAGLLSVATNFDKAKTAHAFLKeryrPRKVYVVHRLDQDTSGVMLFALTGEAFFGLkaLFADHDIDREYTAVVHGKMTQQ--EGTWQSYLYEDKAY--VVHSTQDPDKGELAITHFKTVEARTHFSLLNLKLETGKKNQIRVHCEDHGFP---------------------------
>UniRef50_A0YDZ6(87-231:280) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDZ6_9GAMM  E=4e-17 s/c=0.62 id=30% cov=26%
------------------------------------------IWYKPYGVLCQGSKWGDHCTIDRMIEiytQKRSYLVHRLDRATTGLMIIAHSKDMAAKL-----------------------------------------------------------------------------------------------------------------------
>UniRef50_B7GEZ0(71-263:315) Pseudouridine synthase n=7 Tax=Bacillaceae RepID=B7GEZ0_ANOFW   E=4e-17 s/c=0.47 id=21% cov=52%
----------------------------------------------------------------------------RLDRDTSGVILFAKHALAGAILDQylAKRTIRRTYIALVHGYVKQKKG-TIEAPIGRDRHH--PTRRRVSKTGDTAITHYERLQYDKQKHVSLVRLTLDTGRTHQIRVHMSYIGHP---------------------------
>UniRef50_A7H6D3(87-261:339) Pseudouridine synthase n=6 Tax=Cystobacterineae RepID=A7H6D3_ANADF   E=4e-17 s/c=0.52 id=28% cov=53%
-------------------------------------------------------------------------PAHRLDRDTSGVVLVAKNRKTMVRLTElftDGADVKKTYLALVKGKMPREAG-TIDLPLAEHEQTARSKAARGVNLQEAL---TRWKVVSAMKEASLLAVTIETGRTHQIRRHLEAVGHPVL-------------------------
>UniRef50_C7LWM1(91-251:526) Pseudouridine synthase, RluA family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWM1_DESBD  E=6e-17 s/c=0.56 id=26% cov=53%
----------------------------------------------------------------------------RLDKDTSGLIVLAlsESARLSLTQAFASREVYKEYLALVAGVPDSSGTVSLALG-RHPSIKTRMAVVERGGRAAET--RFELLWSAADRSASLVRVRIMTGRTHQIRVHMAALGHPLL-------------------------
>UniRef50_D1R6W7(78-246:295) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6W7_9CHLA  E=6e-17 s/c=0.53 id=22% cov=55%
--------------------------------------------------------------------DPSLKLVHRLDRDTTGILLFAKTDAVLHKMirLFKTFKVKKTYYVIVDGAISKE------KGVIDNNlaplHKYQGQTVwGQATGSKGVHARTGWRKEKKGQDCTLIQCYPVTGITHQIRVHMSEMGHPIL-------------------------
>UniRef50_Q28US1(79-289:354) Pseudouridine synthase n=43 Tax=Rhodobacterales RepID=Q28US1_JANSC   E=6e-17 s/c=0.42 id=21% cov=69%
----------------------------------------IIAINKPAGLPTQggtgqsrHVDGLAEALKFGLEDKPRL--VHRLDKDTSGVLLMARTRMGAKALTdaFRLRSTRKIYWAAVAGSPLPRMgtiklglVKAPGHGRGGENEKMRAVPVDEIaqVDGAKRAETDYAVMSNLGGRVCWCALVPITGRTHQLRAHMAEIGHP---------------------------
>UniRef50_Q6AQ24(125-225:229) Related to ribosomal large subunit pseudouridine synthase B n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ24_DESPS  E=6e-17 s/c=0.89 id=34% cov=30%
---------------------------------KEEEQKVYYLLNKPKGYVTTLSDPQGRPVVTDLLhgINERVFPVGRLDFDTEGALLLTNDGDLAQK------------------------------------------------------------------------------------------------------------------------
>UniRef50_A1V9V4(132-312:390) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1V9V4_DESVV  E=7e-17 s/c=0.50 id=29% cov=53%
-------------------------------------------------------------------------PAHRLDRDTSGLLLVARSYAMLRTLHEAFASHDalvKEYLAWVAGCWQPAA------PVTLHDRLSKGAEAsgfeRVASDDEGAEAACTVRCLLREQHRSLLLVTLHTGRTHQIRVQLSRRGHPLL-------------------------
>UniRef50_C4L584(57-239:287) Pseudouridine synthase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L584_EXISA  E=7e-17 s/c=0.49 id=26% cov=25%
-----------------------------------------------------------------------IHVINRLDRDTSGVVLFAKYGFIHHRFseLQKANGLMRTYKALVEEEVTPQTIDA---------------------------------------------------------------------------------------------
>UniRef50_A5VJ18(80-248:301) Pseudouridine synthase, RluA family n=13 Tax=Lactobacillus RepID=A5VJ18_LACRD  E=8e-17 s/c=0.53 id=23% cov=53%
-----------------------------------------------------------------------THVATRLDRDTSGLVVFPKHRFAHAVLdeQLKKHLVKKNYLALIKGKVPAEHGY-----IDAPIQRDPNSFVKRMVGKEGKASVTEYWRQECNVQASLIKIRLHTGRTHQIRVHFASLGFP---------------------------
>UniRef50_Q4A7R4(40-253:304) Pseudouridine synthase n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4A7R4_MYCH7  E=8e-17 s/c=0.42 id=23% cov=79%
------------------QKIKIFNDYKRPKPQLEPaeidfeiifQDQNMILINKPKNLVVHPGVGNWKNTLVNglishfdsLEQLDHIRPgiVHRLDKDTTGLLLVAKNAKAHSFFVNelANRQIKRFYKAIVIGKVLHKFMKInLPIGRDLKN-PLKKTISFFNSKPAITNVELIKHFNYQNQDFSLVKCQLETGRTHQIRLHLAHIGYP---------------------------
>UniRef50_B0N6U2(66-277:328) Pseudouridine synthase n=5 Tax=Bacteria RepID=B0N6U2_9FIRM   E=9e-17 s/c=0.42 id=19% cov=53%
-------------------------------------------------------------------------PVHRLDRNTSGIVIFGKTLAALQNLnemIKQRHCIEKKYLTICRGQLNH---QRNLHGYMIKLENQAQVKLVKKDYPGALTMETIVRPLKYNCDYSLVEVTLITGRMHQIRVHLSSIEHP---------------------------
>UniRef50_Q3JQ55(244-421:477) Pseudouridine synthase n=170 Tax=cellular organisms RepID=Q3JQ55_BURP1  E=1e-16 s/c=0.50 id=23% cov=54%
--------------------------------------------------------------------------AHRLDRETSGILMLAKKRSALVGLHEqiRENRMDKRYFACVHGDWAADWGRRRVVKAPLFKYATPDGERRVRVQEDGLPSHTVFNLVDRWPDYALVEAELKTGRTHQIRVHLAHLGLP---------------------------
>UniRef50_Q8ERS8(113-266:322) Pseudouridine synthase n=2 Tax=Bacillaceae RepID=Q8ERS8_OCEIH   E=1e-16 s/c=0.58 id=21% cov=47%
-----------------------------------------------------------------------VHIVTRLDVNTSGLVLVAKNQYVHSLFsrMQQEGNINRVYEAIVHGEVSP------TSGIV--DAPIARKEGSIIERTvdmrNGKYAKTNYRVLYADSIASWVEIKLETGRTHQIR------------------------------------
>UniRef50_Q7UUI8(71-264:321) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UUI8_RHOBA  E=1e-16 s/c=0.46 id=24% cov=71%
----------------------------------------IIVVNKSAGTLTVPTDRGEPNSLVDRVsiylsyskSKKEAFVVHRLDRETSGLLVFGKHEPIADLLIeqFKDRRPTRVFHAIVAGNVSEDEGtfeSHLATGSNLDRYETRPGKDTDQAITHYKVVRRLAERESSHGeETTLIEAQLETSKRNQVRVQFANAGHPVL-------------------------
>UniRef50_A9IIW7(100-270:324) Pseudouridine synthase n=5 Tax=Bordetella RepID=A9IIW7_BORPD   E=1e-16 s/c=0.52 id=27% cov=51%
----------------------------------------------------------------------------RLDKDTSGLMVVARNELAQTHLvrQLQARSMGREYialahgWLPVAGKVDRPIGRDAR--VPVRMSVERP-----IAPKPAITHYAPLRRGRApDGPVTEVACRLETGRTHQIRVHLASLGHPLL-------------------------
>UniRef50_Q3ABZ7(68-251:305) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q3ABZ7_CARHZ   E=1e-16 s/c=0.48 id=23% cov=53%
-------------------------------------------------------------------------IVHRLDKDTSGLLVVAKNDLAHQSLAEQikEKKAVREYWTIVHGYLKNKEGI-----IDLPIGRHPRDRQKMaVVSNGKTAQTVYKVLEEFNKGFTLIQAKLLTGRTHQIRVHFSYLGHPVL-------------------------
>UniRef50_Q03TY5(50-247:295) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03TY5_LACBA  E=1e-16 s/c=0.45 id=21% cov=55%
-------------------------------------------------------------------DQPGPYILSRLDQETTGALLMTKTPAVVPIMVRhiADKQVQRTYLAWVHGRLTGDGV--FTDPI---GRDPLDKRKRQVNGDHAQPAVTHYHVCEYREQATLIQLRLETGRTHQLRVHLAAAGHP---------------------------
>UniRef50_B6BGX6(39-235:308) Pseudouridine synthase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGX6_9PROT  E=2e-16 s/c=0.45 id=20% cov=66%
------------------------------------------VFDKPSGVLIH---PQNRKTPYSLIDElkyqygRDANIAHRIDQETSGLVLCAKNKESERDikMMFEQRDMKKKYLALVHGELKESIC--IEEPLLRREDESAIVRmvVKVHEEGKASKTDIRPLKYFAETDMTLVECSPYTGRQHQIRVHLFHVKHP---------------------------
>UniRef50_D0MHX3(15-189:242) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHX3_RHOM4  E=2e-16 s/c=0.50 id=27% cov=56%
----------------------------------------------------------------------------RLDAPVSGVMVLARTSKAAARLMQqfRERTVEKVYLALVEGELegsgtWEDFIAPARDHMRLVPE----------DHPFGKRAVLHWQALMTRNGLTLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRARRW----LAPGQ------
>UniRef50_A7HL94(101-265:317) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A7HL94_FERNB   E=2e-16 s/c=0.53 id=21% cov=47%
----------------------------------------------------------------------------RLDKETSGVLIVAKDRSVARELSEiiSSRNVEKIYNALVFGKVQKVTINTPIDG---------QDAVSHIIPIEYFRVKLNGI----SVELSFLEVEIETGRKHQIRKHLSSINCP---------------------------
>UniRef50_A4WSV2(95-276:349) Pseudouridine synthase n=41 Tax=Alphaproteobacteria RepID=A4WSV2_RHOS5  E=2e-16 s/c=0.48 id=26% cov=21%
----------------------------------------------------------------------------RIDKDTSGLLVVAKTDRAHQGLAaqFEAHTVERRYLALVHGVPEPSD------------------------------------------------------------------------------------------------
>UniRef50_C7MES4(98-266:318) Pseudouridine synthase, RluA family n=5 Tax=Actinomycetales RepID=C7MES4_BRAFD  E=3e-16 s/c=0.52 id=23% cov=53%
---------------------------------------------------------------------PDLELIHRLDRSTSGVLALAKSPSMLRYLHdllrDREDEIERRYLALVAGHWPAET--------TILDAPLRREENRVVVDPdGQRAETHVAVAQRFGNRATLLEVRLLTGRKHQIRVHLQHAGHP---------------------------
>UniRef50_D1U4S9(98-280:596) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4S9_9DELT  E=4e-16 s/c=0.48 id=30% cov=53%
----------------------------------------------------------------------------RLDKDTSGLMVvaLTEGDRLRLAADFAGRRVRKVYLAVVLGRPAQPAGTIDAPMGRHPSQKTRMAVVARGGREAVSDYRVLWTGPR--GLASLVAVRIHTGRTHQIRVHMAHIGHPLL-------------------------
>UniRef50_C6XLD8(16-233:272) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLD8_HIRBI  E=4e-16 s/c=0.40 id=22% cov=68%
----------------------------------------ILAFNKPSGLACQTRSPADRTfdaLLQVYVKRNGKRPrmLHRLDMLTSGVIIAARTKPATSFFqqTFERREAYKSYLAIVRGPafeksegVIDAHLQRYQKEPNL--ALMRPCDV---DGEGAQDARTRYLVLSSQNDYHFLLLTPETGRTHQLRVHLEHFGRPIL-------------------------
>UniRef50_C8S0A2(52-285:356) Pseudouridine synthase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S0A2_9RHOB  E=4e-16 s/c=0.37 id=24% cov=23%
-------------------------------------------------------------------------IVHRIDKDTSGLLVVAKTDRAHHGLAaqFEAHSVTRHYIALVHGAPNAAD------------------------------------------------------------------------------------------------
>UniRef50_A6TAT3(52-230:263) Pseudouridine synthase n=57 Tax=Bacteria RepID=A6TAT3_KLEP7   E=4e-16 s/c=0.49 id=25% cov=56%
---------------------------------------------------------------------PGCTLVHRLDFGTSGLMVIARNKGINALLCQQfsQRTVDKVYTALLCGHLAED--EGIVEAAIAKDPARFPrmALCARHGKPARSRYRvidrlYQAREGERALALTRVTLTPETGRTHQLRIHCQLLGYPIL-------------------------
>UniRef50_Q30SZ1(3-195:241) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q30SZ1_SULDN   E=6e-16 s/c=0.45 id=21% cov=56%
-----------------------------------------------------------------------VYPIHRLDKPTSGVLLFALDKESAKIMGEKfmAHEAKKSYIAVVRgytlqsGEIDYALSIKFDK-IADKDSSSDKEPQEALTHYKRLATVELDFEVGKYDKTrySLVKLNPLTGRKHQLRRHMKHISHHIL-------------------------
>UniRef50_C9L5B3(30-194:244) Pseudouridine synthase, RluA family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5B3_RUMHA  E=6e-16 s/c=0.52 id=25% cov=52%
----------------------------------------------------------------------------RLDQPVQGVLVFAKDKESAAKLSKQMQqgKFEKTYLAYTQGH-TDKKQETLIDELE-KDGRTNTSKVVAKKTANSKRAELSYKVLKETEEGSLLEVSLKTGRHHQIRVQLAHAGLP---------------------------
>UniRef50_O50310(49-265:327) Uncharacterized RNA pseudouridine synthase Cpar_0723 n=13 Tax=Chlorobiaceae RepID=Y723_CHLP8  E=6e-16 s/c=0.40 id=19% cov=55%
-------------------------------------------------------------------------IVHRLDKDTSGLIIIAKNPTALHKLArqFANRQVEKVYKAIVWGVPKAESG-TIKTNIGRSHKNRKVMANFPYEGAEGKHAITDYQVVEDLGYFSLMDVTLHTGRTHQIRVHLQHLGHSIL-------------------------
>UniRef50_B1MZP7(83-252:300) Pseudouridine synthase n=5 Tax=Leuconostocaceae RepID=B1MZP7_LEUCK   E=7e-16 s/c=0.51 id=25% cov=53%
------------------------------------------------------------------------HVVTRLDRDTSGIVLLAKHRFAHAVLDQqlQDHTVEKFYLAYPSGILTEDHGD-----INAPIGRVEGDFIKREVRDDGKPSRTEYWVERRydengEQPMTRVKVQLHTGRTHQIRVHFKNIGHP---------------------------
>UniRef50_Q2S3B7(83-283:349) Pseudouridine synthase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3B7_SALRD  E=8e-16 s/c=0.43 id=25% cov=53%
----------------------------------------------------------------------------RLDKGTSGLLVVAKRGRAHQPLAeqFKAHTVDRRYRAIVWGRFAPSDGTI--EGAIGRD-PHHRQRMAVVPEDEGKWARTHYETVETHAHTSVVEFELETGRTHQIRVHARAQGHPLL-------------------------
>UniRef50_C8PZW5(3-210:266) Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZW5_9GAMM  E=9e-16 s/c=0.41 id=28% cov=55%
-----------------------------------------------------------------------VYPIHRLDRPTSGVLLFALSSESARQLCEQfeNRQVQKSYLAIVRGYLTvnaqtsgliDYPLTQILDKIgdkpslqalqqrkvsstdMFAEALSSPAELTLLQPAQTHWQclatTEQPFQARARYPTsrfSLARLTPITGRKHQLRRHMKHVFHP---------------------------
>UniRef50_D2R4N0(89-259:313) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4N0_9PLAN  E=1e-15 s/c=0.50 id=23% cov=51%
----------------------------------------------------------------------------RLDRGVSGLLIFGKTTELAQMLrdQFAMHKPEREYVAIVRGKLDKP--EGMIESFLATDRDLN--RYSTDDESIGQHAVTHYRVIEELAGASVVQVWLETGRRNQIRVHFAEAGHP---------------------------
>UniRef50_Q0ANT2(72-265:330) Pseudouridine synthase n=2 Tax=Hyphomonadaceae RepID=Q0ANT2_MARMM   E=1e-15 s/c=0.44 id=27% cov=51%
----------------------------------------------------------------------------RLDKDTSGILIVGKGPKATARLakAFQSHKTRKTYWAIAIGVPKPKMGEikgfmrkAAASGVDSERETM--VAAGHGDEGAQHALTRYVVIGEAGQKASWVALRPVTGRTHQLRVHLAAMG-----------------------------
>UniRef50_A9CFZ5(20-180:222) Pseudouridine synthase n=3 Tax=Rhizobiales RepID=A9CFZ5_AGRT5   E=1e-15 s/c=0.53 id=25% cov=52%
----------------------------------------------------------------------------RLDKDTSGIVLMSLNRKAHAAIAaqFEKRETRKSYVAIVWGTVAGEEGEvDLPLAIDPDNKPRH----RVDHENGKPAQSLWRVLERLPLPATRLALTPLTGRTHQLRVHMKALGHPIL-------------------------
>UniRef50_A9BWX6(36-202:245) Pseudouridine synthase n=2 Tax=Comamonadaceae RepID=A9BWX6_DELAS   E=1e-15 s/c=0.51 id=26% cov=55%
---------------------------------------------------------------------PDALVVHRLDQATSGLVVMARSLASQRLLseAFAQRRVHKLYVAVVAGRPAAQQADAWQS-IDLpiaadwERRPLRIIDALQGKPSQTLWRAMPAATEGHDTPTTRVQLQPVTGRTHQLRVHMAALGH----------------------------
>UniRef50_Q21K97(72-254:321) Pseudouridine synthase n=10 Tax=Gammaproteobacteria RepID=Q21K97_SACD2  E=1e-15 s/c=0.47 id=21% cov=52%
----------------------------------------------------------------------------RLDRDTSGCILVAKKRSMLRYLQElfrGEKRIHKRYLALVIGRWPSR--RNLVDAPLLRKELQSGERIVRVSLDGKPSKTEFNVVQRFGESATLVEARPITGRTHQIRVHAQHQGHP---------------------------
>UniRef50_A6C0W7(104-276:342) Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0W7_9PLAN  E=1e-15 s/c=0.49 id=17% cov=51%
----------------------------------------------------------------------------RLDRNTSGIMVVAKDNQVHAKLsaQFEKRDVQKEYRAIVWGrmEFDTDYIDTF----MCVHPRAREKMIVCDEGGNARNAFTYYEVIERYQAFTYVRLKPRTGRTHQLRVHMQHIGH----------------------------
>UniRef50_A1URK8(49-264:336) Pseudouridine synthase n=2 Tax=Bartonella RepID=A1URK8_BARBK   E=1e-15 s/c=0.39 id=21% cov=54%
-------------------------------------------------------------------------IVHRLDKNTSGVIVVAKNdlahkGLSAQFSDHGRTGVlDRRYHALIWGSPNRNIGVITASLGRARYDRTKQAVIHSHNIYARHAVTHFSVIEKYQTCadkipfASLLECRLETGRTHQIRVHMAHIGHP---------------------------
>UniRef50_C1ZGS9(60-280:345) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGS9_PLALI  E=2e-15 s/c=0.38 id=21% cov=53%
-------------------------------------------------------------------------IVHRLDRDTSGVLVVAKDNTVHQHLsrQFEERSVEKEYHAIVWGEMqfDADYVETYVR-VSFRNRERM---MVCPPGDNARQAATFYEVQQRFRGFTYVKLQPQTGRTHQLRVHMHHLGHP---------------------------
>UniRef50_B5JHH9(48-265:324) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHH9_9BACT  E=2e-15 s/c=0.39 id=19% cov=53%
----------------------------------------------------------------------------RIDKDTSGLVVFARTflAKRALSEQFRAHSIERRYLAIVHGELKAQSIRThlvRETGDGLRGSAPKGATNSEGEELGRLAITHVDVVERLAG-ATLVSCRIETGRTHQIRIHLSEIGHP---------------------------
>UniRef50_UPI00006CD8DD(102-286:446) pseudouridine synthase, RluD subfamily protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD8DD  E=3e-15 s/c=0.45 id=22% cov=55%
----------------------------------------------------------------------ELYVLHRLDKLTSGVLIMAKDRDLTKKFHESETElIKKTYLARVHGNFNHQYLEY-EKPIYcIYKKVGTYAVLDTTDEEeikskgaKQSKTIFKKIWYDEKSDSSLLECQPITGRTHQIRVHLSSLGFP---------------------------
>UniRef50_B8I750(31-245:299) Pseudouridine synthase, RluA family n=2 Tax=Clostridium RepID=B8I750_CLOCE  E=3e-15 s/c=0.39 id=23% cov=68%
----------------------------------------MLVLNKQSGIVVHPTSYHPDNTIANgivyYLKQKGvtkkVRPVSRLDRETSGIIIFAKNQFTQEMLIQQMHNnlFKKEYLGIVQGIPQNNEGTI---NLPIARKPGSIMLRHISEEGAPSITHYKILKTFPSHNSALLSFKLETGRTHQIRVHCKAMGFP---------------------------
>UniRef50_Q0C3G8(66-298:349) Pseudouridine synthase n=2 Tax=Hyphomonadaceae RepID=Q0C3G8_HYPNA   E=4e-15 s/c=0.36 id=25% cov=65%
----------------------------------------MLAINKPAGLAVQGGSGQGRHVdgLIAGMDVDGHRPvlVHRLDKDTSGVLLLAKHPAAAARLTelFRSREMDKVYWAVTVGVPSPQAGQIrcwMVKGVPdinepsgyrpvdpyatkrRDGDRERMIRSAQGVEGARHSITDYVVVSTAGPKAAWVAMRPETGRMHQLR------------------------------------
>UniRef50_A6G930(60-283:356) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G930_9DELT  E=5e-15 s/c=0.37 id=24% cov=73%
-------------------------------RRPAPEEPAVILdygvvhedpdvlvLDKPGNLPVHPTARYHRHTLTALMrrrlgPKHGWEMAHRIDRETSGVIIFGRRKASGPKIkgSFFRREVHKEYLAIVLGRLELPEGPRLIDmplgsavgsKIMIKMG---PRPVDEGGLPAQTTIEVLAHGEHRGQPITLVRCLPRTGRTHQIRVHLAEIGHPIL-------------------------
>UniRef50_C4XN86(110-304:339) Pseudouridine synthase n=2 Tax=Desulfovibrio RepID=C4XN86_DESMR   E=7e-15 s/c=0.43 id=23% cov=53%
-------------------------------------------------------------------------PAHRLDRDTTGLLLVAKSYRRLRALHEAMQdgTLRKDYFAWVWGKWllgEENEWVTMRDALAKSGG---PGRERVTAGEDGKEAVAKVRLISRAPTASLVEVRLETGRTHQIRAQLASRGYP---------------------------
>UniRef50_C4PLV8(46-226:274) Pseudouridine synthase n=13 Tax=Chlamydiaceae RepID=C4PLV8_CHLTZ   E=7e-15 s/c=0.46 id=32% cov=23%
-----------------------------------------------------------------------VHLVHRLDRDTSGCILFAKHAKASSLITQLFKnpEIDKRYIALVFGQPRQE-------------------------------------------------------------------------------------------------
>UniRef50_B2UKZ0(25-217:258) Pseudouridine synthase n=2 Tax=Verrucomicrobiaceae RepID=B2UKZ0_AKKM8  E=8e-15 s/c=0.43 id=22% cov=55%
--------------------------------------------------------------------------VNRLDRETSGLTLVAKHKRAARELgrAMQRRLIHKEYLAIVQEWPewteTACTAPILRQGEVAESRIWVKQAVHPAGKACTTVFRKERTWNTRRGPLALVRCIPETGRMHQIRVHLAHLGHPIL-------------------------
>UniRef50_Q7UQ77(22-222:256) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodopirellula baltica RepID=Q7UQ77_RHOBA  E=9e-15 s/c=0.41 id=24% cov=64%
-------------------------------------------------------------------------IVSRLDSMTSGVIVMARTSKAASRLTpqfanHSGDGAKKTYLAVVSGRVEQQQG-TLVDDVYKDDA-AHRMRVAHHSRSDAKEARLEYEVLGCDRELTLLMVKPLTGRKHQIRLQWAEVGFPILGDTKYGSERSWPTGIALHSWR----
>UniRef50_C4Z1D5(4-190:225) Pseudouridine synthase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z1D5_EUBE2  E=1e-14 s/c=0.44 id=29% cov=55%
----------------------------------------------------------------------------RLDRPVSGLVLIAKNKSAAAKystLMQKEGGFNKQYEALICGKLSE------SKGTFVDylkkDGRTNtsaivPADAAANDKEAKLSKlEYEVISYDEVKDITHVRIHLITGRHHQIRVQFASRRHPLVGDYKYATAD----------------
>UniRef50_C7H0C0(62-286:322) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0C0_9FIRM  E=1e-14 s/c=0.37 id=26% cov=66%
----------------------------------------LLVVYKRAGLLTHGSSTEKKRTLLNevktYLIQKGEYDPGfektfslatsnRLDRNTEGLIAIAKNAASQRELnaAFKEGRIERYYVAEVVGEV--------RGDVTIDyplyksaknntvfadkDGSVPPDVTKEAITKVHPIRVNRIDKNGSEFTYTVVRVKLLTGRTHQIRVHLAAIGHP---------------------------
>UniRef50_C5RBB6(80-245:305) 23S rRNA pseudouridylate synthase RluD n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBB6_WEIPA  E=1e-14 s/c=0.49 id=20% cov=52%
------------------------------------------------------------------------HVVTRLDRFTSGVALLAKH-RFAHGLLDKQlqtHTVDKRYYAIVDGIVPDDHGF-----IDAPIGRMDNDFIRREVRADGRPSQTEYWVVNRMPNQTLVKVQLHTGRTHQIRVHFKYIGHP---------------------------
>UniRef50_Q8ZQ16(88-261:319) Ribosomal large subunit pseudouridine synthase C n=110 Tax=Gammaproteobacteria RepID=RLUC_SALTY  E=1e-14 s/c=0.47 id=22% cov=52%
----------------------------------------------------------------------------RLDRDTSGVLLVAKKRSALRSLHEqlREKGMQKDYLALVRGQW-QSHVKTVQAPL-LKNILQSGERIVRVSQEGKPSETRFKVEERYAF-ATLVRCSPVTGRTHQIRVHTQYAGHP---------------------------
>UniRef50_Q1VZ16(50-254:292) Pseudouridine synthase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZ16_9FLAO  E=1e-14 s/c=0.40 id=29% cov=24%
---------------------------------------------------------------KDKLPYPQ--PVHRLDNPTSGLLIIAKTLSSKSYLsvLFEHNKVHKIYLAIVEG------------------------------------------------------------------------------------------------------
>UniRef50_B1C9B9(59-248:307) Pseudouridine synthase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9B9_9FIRM  E=1e-14 s/c=0.43 id=24% cov=23%
--------------------------------------KNIILIDKPSGILSQAdgsSKEDIVSNLISYLNSKSTGIVTRLDLNTSGIVL----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q5PAD0(83-253:327) Pseudouridine synthase n=5 Tax=Anaplasma RepID=Q5PAD0_ANAMM   E=1e-14 s/c=0.48 id=23% cov=50%
----------------------------------------------------------------------------RLDKDTSGLMVAAKTENAYYRLSEelANQGFKKEYLAVAWGIPCP------KRGVIHTNIRVKRSDITMMEaanSGGKPAKTEYEVEQELGEVASLIRCTLHTGRTHQIRVHMSHIGH----------------------------
>UniRef50_C0R003(17-197:241) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0R003_BRAHW   E=2e-14 s/c=0.45 id=22% cov=53%
----------------------------------------------------------------------------RLDRPVSGIIVFAKTSKAASRLSEaiRDRKFEKTYYAVVNGILLEKEAKLENYLIKKTNKLGNIAQVVFENTKNAKIAKLKYNVIKEDviKNLSLLRIELETGRFHQIRVQLANIGH----------------------------
>UniRef50_P53294(115-299:404) Pseudouridylate synthase 6 n=8 Tax=Saccharomycetaceae RepID=PUS6_YEAST  E=2e-14 s/c=0.44 id=23% cov=53%
----------------------------------------------------------------------------RLDKITSGLLILAKNSQSAGEIQKsiRSRDMIKIYLARVKGRFPHSELILDNENaaettfedtskVTVEMTPIYSIDPKRqfpvgLSTSKDAITKFYPIRYFSHADETVVACKPITGRTHQIRIHLARLGHP---------------------------
>UniRef50_C8PW17(120-319:365) Pseudouridine synthase n=5 Tax=Moraxellaceae RepID=C8PW17_9GAMM   E=2e-14 s/c=0.41 id=21% cov=54%
----------------------------------------------------------------------------RIDKDTSGLLMIAKKRSTLKTLQEhlREKTLQKTYLCLVVGWISSETqtidkpLLKYTLPATQEGKSgERRVKVDVKSEDSKPSQTQINVLQKFelnGQKVSLIEAKPLTGRTHQIRVHLASIGHPLL-------------------------
>UniRef50_C4ZAQ6(83-248:295) Pseudouridine synthase n=15 Tax=Clostridiales RepID=C4ZAQ6_EUBR3   E=2e-14 s/c=0.49 id=25% cov=51%
----------------------------------------------------------------------------RLDRDTTGLTIVAKHALAGGILGNavAKRAIHRTYYAVCSGCTP--ACMRISAPIARKDAST---IERCVDFKRGEYAVTDFIRIKYNPDNnlSLVKLRLLTGRTHQIRVHMKYIGFP---------------------------
>UniRef50_Q1WS43(44-240:296) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=Q1WS43_LACS1   E=2e-14 s/c=0.41 id=27% cov=47%
------------------------------------------------------------------------HVITRLDRDTSGLVLVAKH-RFAQGLINKqveEHSIDKKYLAVVEGIITE------KHGII--DKPLGPREngiGQMVTDTGKIAKTEYWVREYLGDKATLVECKLHTGRTHQIR------------------------------------
>UniRef50_A7AQ79(155-355:465) RNA pseudouridylate synthase family protein n=1 Tax=Babesia bovis RepID=A7AQ79_BABBO  E=2e-14 s/c=0.40 id=21% cov=55%
-----------------------------------------------------------------------LYPVHRLDKLTSGVIILAKSSKAASEFCEgiRNSRFRKVYIARVKGDFTnvfgDHECISINDGIGVGNGSVACCHgfMRCVSHKlsmheftlddtkkdvKVAETRFRMLSYNSSLDESLLLCYPVTGRTHQIRAHLKYLGYP---------------------------
>UniRef50_C5SM25(49-246:286) Pseudouridine synthase n=2 Tax=Caulobacteraceae RepID=C5SM25_9CAUL   E=3e-14 s/c=0.41 id=22% cov=60%
----------------------------------------------------------------------------RLDRDTSGIILAAKTRTSAAFVgnAIAARDVHKAYVCIVANPHNLKDEGVIDAPLRREEiGREAYSRICDPHHPDALTARTIYRVVSRTDTSALVQCEPFTGRMHQIRVHMAHLGCPIAGDVRYG-GALSLDGL----------
>UniRef50_Q6MDB9(60-245:298) Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDB9_PARUW  E=3e-14 s/c=0.43 id=23% cov=57%
---------------------------------------------------------------------PSIQLIHRLDRQTTGVLALAKNKTTFEALVNQFKqlKVSKSYRAIVDGILTSSKGH-IENYLGKKHVYQGQSIWGEVPSFQGLYASTYWSCLEIGKKASLVRCFPKTGRTHQIRVHLAGLGHPIL-------------------------
>UniRef50_Q317H5(105-278:332) Pseudouridine synthase n=2 Tax=Desulfovibrio RepID=Q317H5_DESDG   E=3e-14 s/c=0.46 id=23% cov=54%
-------------------------------------------------------------------------PAHRLDKNTSGLLLAGTTYTALRTLQDlfrNGHSLIKDYCAWVCGIWPEQEALTLTD-VLVKEGTPGKEKIHALpagsaqphtAPPKGREALCQVVPLLRLDNATLLGIRLATGRTHQIRVQLASRNHP---------------------------
>UniRef50_B7CDE9(22-213:253) Pseudouridine synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDE9_9FIRM  E=3e-14 s/c=0.42 id=19% cov=52%
----------------------------------------------------------------------------RIDYETSGLVLFCKHPFFQAYcdKNMEEHHIKKEYIALVQGH-TNYKNKKIISNIARDRHNAK----KMIIHPNGKESVSIFNTLKNYKDCSLIQVTILTGRKHQIRVQCASLNHPIL-------------------------
>UniRef50_B8DML1(159-353:393) Pseudouridine synthase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DML1_DESVM  E=4e-14 s/c=0.41 id=25% cov=57%
---------------------------------------------------------------ADFLPT----PAHRLDRDTSGLLLVATSYARLRALSDafaAREGLVKEYLAWVAGRWPHEGARTLHDRLEKQGAPGR-QKVRRVGGEGSVPRAAsgneavrvesgtdaahaaagadagrhaacTVTPLRRGDGASLLLVRLHTGRTHQIRVQLAERGHP---------------------------
>UniRef50_UPI00016C40E0(2-178:238) pseudouridine synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C40E0  E=4e-14 s/c=0.45 id=30% cov=38%
--------------------------------------HHLVVVNKPAPLLTQA--PPGVPNLEErvraYIKDKYAKPAGvylgvphRLDRPVSGVVCFARNTKAAQRVHSQfeHRSVRKVYWALVEGVVEPDA------------------------------------------------------------------------------------------------
>UniRef50_A3Y8C6(94-268:322) Pseudouridine synthase n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8C6_9GAMM  E=4e-14 s/c=0.46 id=21% cov=52%
----------------------------------------------------------------------------RLDRDTSGLIMISKKRSVlkqLHAALREKEGVQKTYQALVYGSWPKRK-QQVNAPLLKNELKSGERIVKVHTE--GKESLTRFKLLRQFEGYSLVECEPVTGRTHQIRVHTLHAGYP---------------------------
>UniRef50_A4CLQ5(13-199:236) Pseudouridine synthase n=16 Tax=Bacteria RepID=A4CLQ5_9FLAO   E=4e-14 s/c=0.43 id=22% cov=38%
----------------------------------------------------------------------------------------------------------KTYWALV-GTPPPETAGRLVHWLE-RNQKQNKSYARAKEVPGSKQAILNYRLLGSLDRYHLLEIDLETGRHHQIRAQLAAIGSP---------------------------
>UniRef50_Q492Q1(69-263:338) Pseudouridine synthase n=2 Tax=Candidatus Blochmannia RepID=Q492Q1_BLOPB  E=6e-14 s/c=0.41 id=20% cov=53%
----------------------------------------------------------------------------RLDRETSGVLLVAKRRTALVYLHEqlRLQNMKKEYLALVHGRWNVN-LQIVSVPLFKKNTLLNSSRVVYIDSENGKFSTTHfQIKEYFDNVATFLAIKPITGRTHQIRVHTQYASHP---------------------------
>UniRef50_A4S1L0(14-183:243) Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S1L0_OSTLU  E=6e-14 s/c=0.47 id=24% cov=55%
------------------------------------------------------------------------YIVHRLDMDTSGVAVFVKKQHLVANVAgqFQEKTAKKTYLAVSVGVVPPDCGDSFIVDAPIGDhGIVQEARTVDFSGEGKDARTTCEIIARATPPaavAALVRVTPLTGRTHQIRVHLAHAGLP---------------------------
>UniRef50_A5WHV7(3-194:237) Pseudouridine synthase n=3 Tax=Psychrobacter RepID=A5WHV7_PSYWF   E=8e-14 s/c=0.41 id=21% cov=68%
----------------------------------------LLLVDKPAGLLSIDGKDLKVSLLSRLeRANPEVKLIHRLDMDTSGLMIFAKNKQAQTHISKQfiERIPQKEYQAIVQGTL---AIPGKKGEINIPVRYEPSIKPKHVADPEWKKHALTHYevlhhELRKGRPVTRVALHPVTGRSHQLRVHMVHLGH----------------------------
>UniRef50_A6DHD2(94-264:328) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHD2_9BACT  E=9e-14 s/c=0.46 id=28% cov=55%
-----------------------------------------------------------------------VHIMNRLDRETSGLVLIARHHKAASVLgkQFERRQVGKEYDVLVEGLVSWDQYDALgYMGPAVSSKIRKKfsfTEAEDWQDYGKHSARTEFSVLRRSHELSHLHCRLHTGRTHQIRATLLSLGFP---------------------------
>UniRef50_A7ZGA9(80-263:307) Pseudouridine synthase n=4 Tax=Campylobacter RepID=A7ZGA9_CAMC1   E=1e-13 s/c=0.43 id=19% cov=69%
------------------------------------------VFDKPSGVLSHPNGRHCEYSLNDeiyTLFGRDASVAHRLDCETSGVIVVGKDRNSTIKLkkIFENREVFKSYVAMVQGKIERE-FTIDAKMDLANNYDDVKMRMQICENGKSAVTKILPIKYFDDIDTTLVRAIPLTGRQHQIRLHLFHVKHKIL-------------------------
>UniRef50_Q14NQ9(76-270:312) Hypothetical rna pseudouridylate synthase c protein n=1 Tax=Spiroplasma citri RepID=Q14NQ9_SPICI  E=2e-13 s/c=0.40 id=20% cov=52%
----------------------------------------------------------------------------RLDKLTRGLVLYAKNKITLDLLLakiNQKESIEKKYLAKCEGIIKETDFTL--TGYLYKNEDKQKMVFTKTVQPHAKVVKTHFRVQHQLTNATWLEVTLITGRKHQIRASLSYLHHP---------------------------
>UniRef50_C6LHC3(103-295:342) Ribosomal large subunit pseudouridine synthase, RluD family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHC3_9FIRM  E=2e-13 s/c=0.40 id=25% cov=56%
---------------------------------------------------------------------EQVRGIGRLDKDTSGIVVFARNRIAAARLWQQRQsgRFQKEYVALCEGVFPDEAYEReqtIDAPIqKVTGEKNKMCIVqerccpaagcfavthyRAISEKESCFHEAMRLLSAGDLPgpeqASLVRLHLETGRTHQIRVHMAYIGHP---------------------------
>UniRef50_B6WPU4(84-282:335) Pseudouridine synthase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPU4_9DELT  E=3e-13 s/c=0.39 id=21% cov=54%
-------------------------------------------------------------------------PVHRLDKDTSGILLVAASFAVLREMTtaLRERRMKKEYLAWVEGLWPHSGVRLFRHWLRKEagtgnGREQMHVRQTGAPDKGETEALLLVRPVRVEDRRSLLLVRLLTGRTHQIRAQLSSLGHP---------------------------
>UniRef50_C7MN62(122-269:347) Pseudouridine synthase n=8 Tax=Coriobacteriaceae RepID=C7MN62_CRYCD   E=3e-13 s/c=0.53 id=20% cov=53%
----------------------------------------------------------------------------RLDMDTSGLMMCAKDDTcgMALQDLVRDHKVDRRYLTLVHGNIAFDTGQIDEPiGRVGDDRLRMKISYRPTARNALTTFTVLERFEagRADNGYTLLECRLYTGRTHQIRVHMEFIGHCC--------------------------
>UniRef50_Q5DDR8(142-311:438) SJCHGC01065 protein n=3 Tax=Schistosoma RepID=Q5DDR8_SCHJA   E=3e-13 s/c=0.45 id=29% cov=53%
----------------------------------------------------------------------------RLDRMTSGLLLIAKDYDTSVRLQSQiaSKEVTKHYICHVDGCFPTEPIDhctgfEINNGVVVCSQPVGPispkmgIHAVLPESAGGKPARTHFLRLNYNSvtNTSLVICRLFTGRTHQIRIHTQYLGYP---------------------------
>UniRef50_A9BJA7(62-239:303) Pseudouridine synthase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJA7_PETMO  E=4e-13 s/c=0.43 id=27% cov=47%
------------------------------------------------------------------------HLVHRLDKLTSGVMVVAKNKQTARELTQliKSRETRKYYLTLLVGNLNKKSGEL----------------VSTVYGKTAQLKFNLKKKFDlFGELYSLVEIELYTGRKHQIRVQFADLGFP---------------------------
>UniRef50_D1PYC1(72-275:306) Ribosomal large subunit pseudouridine synthase D n=8 Tax=Prevotella RepID=D1PYC1_9BACT  E=4e-13 s/c=0.38 id=23% cov=54%
----------------------------------------------------------------------QAHVVHRLDRDTSGLMIYAKDKKTEFSLQADWKGTvyDRRYVAVVSGVMEQDEGTIDS---WLKDNKSY-FSYSSSTDNGGKYAVTHFYTLDRSPQHSLVEFKLDTGRKNQIRVHAADMGHP---------------------------
>UniRef50_A9B0U7(61-260:312) Pseudouridine synthase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0U7_HERA2  E=6e-13 s/c=0.38 id=23% cov=55%
------------------------------------------------------------------------HLVHRLDHGTSGALIVSKNPSLNSRFqrMFNEGRVQKTYLALCSGLPDWTKLEVVTGHSRGEFGLWSVYPAAMIDqlygpkDRRVRRAHTSFTVQAVGNAAALLAARLHTGRTHQIRLHAKHIGHP---------------------------
>UniRef50_C3XV24(50-261:335) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XV24_BRAFL  E=6e-13 s/c=0.36 id=22% cov=37%
----------------------------------------IVAIEKPYGVPVHGGPGMGVsiadslPLLQQALKTDRLYLVHRLDKETTGVMLLAKTDDMARQLhsLFRLRKVIKKYWVLTMGVPSHE-------------------------------------------------------------------------------------------------
>UniRef50_B1XIP1(55-226:282) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XIP1_SYNP2  E=7e-13 s/c=0.44 id=20% cov=52%
-------------------------------------------------------------------------PIHRLGRGTSGLMILGRSPLGRQSLTRqlREHQITKIYRAVIpAGDYPDQI--TITTPI---GKIFHPSLGTIfAATADGLSAHSEMRVLERLAKVSRVEVQIFTGRPHQIRIHMAAMGFP---------------------------
>UniRef50_B6HIT3(124-325:526) Pc21g01540 protein n=3 Tax=Trichocomaceae RepID=B6HIT3_PENCW   E=8e-13 s/c=0.38 id=17% cov=55%
------------------------------------------------------------------------RPCNRLDRLTSGIMFIGKHAKGADKMaaALKARSVQKEYVARVKGKFPdgvvvcDQPIMQVSPKLGLNRvratGKEATTKFRRLayyppesaketesSSDDERPATPPASFANETEGYSIVHCLPLTGRTHQIRVHLQFLGHP---------------------------
>UniRef50_Q5HN86(88-236:274) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=61 Tax=Staphylococcus RepID=Q5HN86_STAEQ  E=8e-13 s/c=0.51 id=18% cov=56%
------------------------------------------------------------------VDSEYVEPIHRLDQETVGLLIVAKNPLMKKILdrMLEYNEITRIYKANVKALLP---IKPQTIDMPIGKDKFHSNK-RRISNTGQRAITHIINSKMIKEGVCQLDIKLDTGRTHQIRVHLAEIGHP---------------------------
>UniRef50_C3XID6(64-257:326) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XID6_9HELI  E=8e-13 s/c=0.39 id=19% cov=64%
----------------------------------------YLILNKPRNLVVHHAPSVKEVTLTDYLSAKnyelstingemRFGIVHRLDKDTSGAILVAKNnaSHLRFAEMLQNRTMGRIYICVINKALQHNTFVECYMGRNPNNRL----KMAKLDKEKYPFARDSKSEFRkimesKNGVFELIGVRLFSGRTHQIR------------------------------------
>UniRef50_UPI0001628C7E(119-186:217) hypothetical protein Bpetpseudo_11 n=1 Tax=Bordetella petrii DSM 12804 RepID=UPI0001628C7E  E=8e-13 s/c=1.12 id=57% cov=25%
----------------------------------------LLMLNKPFDALAQLSDDQGRATLKDFVDVSDFYPAGRLDRDSEGLLLLTNDGR----------------------------------------------------------------------------------------------------------------------------
>UniRef50_B8GBL0(61-266:307) Pseudouridine synthase n=3 Tax=Chloroflexus RepID=B8GBL0_CHLAD   E=5e-12 s/c=0.36 id=22% cov=77%
----------------------------------------LLVINKPPACYTgdTPWDTQGsvlavaRRLLTERDGlVPTLHLAHQLDAGTSGILVISKHPRANAPLQAAFNHgqVDKRYLALCAGHPPTATELITGHGRAAAGRWRLYEQAEIGkvlpNGQRVKRAHTQIELRRQYGDVALVWAKPLTGRTHQIRLHLVALGCPLLGDERYG-GPTTVAGM----------
>UniRef50_C8RQ24(69-236:297) Pseudouridylate synthase n=2 Tax=Corynebacterium jeikeium RepID=C8RQ24_CORJE  E=1e-11 s/c=0.43 id=27% cov=56%
---------------------------------------------------------------------PELVAAHRLDRDTRGLLVLARNPVTRGFLqtQFQRREVSKTYQALAADIPeigsqwQDVQLPMLKIKddpqVKVVDGERSRLTVTRIRKlaSSAGAEARPVEATRAGTPTAVYELQPLTGYTHQLRVLMNHLGAP---------------------------
>UniRef50_Q1QR55(12-223:292) Pseudouridine synthase n=4 Tax=Bradyrhizobiaceae RepID=Q1QR55_NITHX   E=2e-11 s/c=0.34 id=32% cov=54%
--------------------------------------------------------------------------AHRLDRDTSGCLVLGRHRKATASlgLLFKHGKISKTYWAVVEGGPTEDEGtidiplgrlnhergwwqkpdpnglpsvtrwKVLGRGIFtaasdrfspspcgVETSEARPEGAGARGNSDGIAPDHPPPRAREEGiQLTWLALEPVTGRTHQLRVHCAAMRWP---------------------------
>UniRef50_Q69K07(147-368:448) RNA pseudourine synthase 4, mitochondrial n=5 Tax=Poaceae RepID=PUS4_ORYSJ  E=3e-11 s/c=0.32 id=28% cov=48%
----------------------------------------------------------------------------RLDRDCSGILVLGRNQlstsmlhaifreKTADALADGTQHVlQRKYVALVIGTPrhPKGLLSAPLAKILLQDGKSERLTIRASSNAASVQDALTEYRVIESCPqgYTWLELFPRTGRKHQ--------------------------------------
>UniRef50_A2U235(4-176:234) Pseudouridine synthase n=3 Tax=Flavobacteriaceae RepID=A2U235_9FLAO   E=4e-11 s/c=0.41 id=21% cov=54%
-----------------------------------------------------------------------VYPIHRLDRKTSGAILLAKEKEyvAKFQDLFTKNQIQKIYYGVVRGF--SPSTKRIDSPVKGRDANVHKEALTELKTLAKIT-LDIAVKPYDSSRYSLIELFPKTGRMHQLRVHSNKISHP---------------------------
>UniRef50_B3T0Q8(72-265:320) Putative RNA pseudouridylate synthase n=2 Tax=prokaryotic environmental samples RepID=B3T0Q8_9ZZZZ  E=5e-11 s/c=0.36 id=20% cov=56%
----------------------------------------------------------------------------RLDKDTSGCLLVSKKKSKLRKLHeyFREGKVKKTYLGLMVGKFTQ-TVYEIDQPLKI---ITTPENGRLaVPDDSGKKAKTKFFLMEKYKNSALFKIEPITGKTHQIRAHAKYMKTPLAADNRYGIQP----------------
>UniRef50_B5Y8D7(49-266:315) Pseudouridine synthase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8D7_COPPD  E=6e-11 s/c=0.32 id=26% cov=67%
------------------------------------------VIDKPPNLVVHPAPSVKgltlcHGLLKDFPQVKNVgsaerpGIVHRLDKDTSGLMLVALSEKGYAGLTKmiSEKSVSRKYLVAVYGV----ANRPFEVDAPIGRDPRNPTRMAVVPHGKNAYTRFRPV--QCLEKVSLLEAELFTGRTHQIRVHLSHAGFYVL-------------------------
>UniRef50_C7LVN5(65-249:281) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVN5_DESBD  E=1e-10 s/c=0.37 id=23% cov=50%
----------------------------------------------------------------------------RLDCLTSGLVLaaAEKRDAAAYKVWQDAGQVSKWYLALARGEV--ATLE--CRGRILDDKR---SVVRVTADEDEPLRWTRVRALRQIDGNTLLLVKIFKGRRHQIRAHLAHAGHP---------------------------
>UniRef50_A6G5N3(95-255:322) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5N3_9DELT  E=1e-10 s/c=0.43 id=21% cov=52%
----------------------------------------------------------------------------RLDKDTSGLLVFARTRRARKALeaQFRAHTIFRRYVALVHGAAKAGVHESYL--IADRGDGLRGSWRGKSPPKAAKKAITKVRVEEKLDGATLISCQLETGRQHQIRIHLAEAGHP---------------------------
>UniRef50_B2RHT4(75-261:324) Probable RNA pseudouridylate synthase n=1 Tax=Porphyromonas gingivalis ATCC 33277 RepID=B2RHT4_PORG3  E=3e-10 s/c=0.36 id=21% cov=52%
----------------------------------------------------------------------------RLDKDSAGMVLFAKNKEVQGFVVDKWSKVvlEQRFVMAIEGEMPDAEgtLDPPRYQTSIKGKQSR---IVAETPSVHSVGTARYKVIRRGAVCSLVEVTLLSGRNNQLRRQMGQLGIP---------------------------
>UniRef50_C1ZMD6(198-359:400) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMD6_PLALI  E=3e-10 s/c=0.42 id=27% cov=57%
-------------------------------------------------------------------PPCHVRAAHRLDRQTSGLVVLSRVPEAGAKLyaQFQAHDVLREYEALVWGWIEPQRLESELIRDRGDGRRGSRQPVTMLEAGAEDSPAANPLPAGKmaatnlvasrqghfksgtgeLAPVSWIRCQLETGRTHQVRIHLSEKGNP---------------------------
>UniRef50_C4ZBX3(6-191:244) Probable 23S rRNA pseudouridine synthase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZBX3_EUBR3  E=5e-10 s/c=0.36 id=25% cov=56%
--------------------------------------------------------------------PPYVGIVHRLDQPVEGVMVFAKNQKAAASLSRQikEHTTEKYYRAAsrgqgVSGADKEEDnhdsaWHTLTDYISF-DKRTNTSKItsekDRLAKKAVLQYRVISVTPDRDSSqneciRTEFDIKLLTGRHHQIRLQLAHIGYP---------------------------
>UniRef50_A9GHW4(82-293:356) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHW4_SORC5  E=2e-09 s/c=0.31 id=22% cov=68%
----------------------------------------VVVVNKPAGVSTipygdeapaeqaATLDALVREVLARRDRLRGRAPLGvvqRLDKGTSGLLVFARTLAAKKHLAQqlRVRAMHRQYLALAHGAVPRgtyrsylvEDRGDGLRGSARDGRREGQLAVTHVEP---IEVLRGPQEGAGAGGVTLVACRLETGRTHQIRIHLAEAGHP---------------------------
>UniRef50_Q98R93(53-271:282) RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE C (PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE) n=1 Tax=Mycoplasma pulmonis RepID=Q98R93_MYCPU  E=2e-08 s/c=0.28 id=20% cov=66%
----------------------------------------ILVINKQAGVSMHSDENSLDKQVLSYLNFKQVdsfvpSSIGRLDKVTSGVVVYAKNYSILKTLKSNEH-LRKTYVFMSN--ITLEPNQKIEH-VFYHKYNPIKKKAELFKENVEESKITKTLLYKVKNNN---YAELITGRKHQIRATLSKLGFP---------------------------
>UniRef50_B3Q780(20-266:322) Pseudouridine synthase n=8 Tax=Bradyrhizobiaceae RepID=B3Q780_RHOPT   E=4e-08 s/c=0.24 id=37% cov=55%
--------------------------------------------------------------------------AHRLDRDTSGCLVLGRHRKATATlgLLFKHSRISKTYWAIVEGGPTEDQgsidlpIAKLnaergwwqkvdpeglpsltkwrvmgRSGVlpaaatttsatsaPIRDATTSgsppPCgegsgvgvhsgsltsgrphpnplprageGVRPARGEADNLSRKPGAILGAPPPTqlTWLALEPITGRTHQLRVHCAAMGWPIL-------------------------
>UniRef50_C4XE77(67-260:296) Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE77_MYCFE  E=6e-08 s/c=0.31 id=18% cov=75%
-----------------DYQNKKFENSAKKDFKIIYEDDNILIVSKPINLAVHSENNCLDKQVLSYLKYNQKdsfkpSHVGRLDKVTSGLMIYAKNYATLVELNYKTGFFEKIYKLK-------SDFNEVKKLVEINIQHDEKLHKMVVTNNAK----DPLAKTLFYTKNNEIFASILTGKKHQIRLSMSHLKTP---------------------------
>UniRef50_C8PQZ0(33-195:276) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQZ0_9SPIO  E=2e-07 s/c=0.36 id=20% cov=56%
---------------------------------------------------------------------PFIAPINRLDTPVSGIILLAFSAQAQTLLSQAFKtgSVEKEYWAICERTAadtteEEPGIHRLEHwlgfhtktqkafvgaaPIDITLTNTTAAGITKPKKHKKPALKKavlYWTLCGKGDRYDFIRISPETGRTHQIRVQMAAAGHP---------------------------
>UniRef50_C8WGQ8(71-267:282) Pseudouridine synthase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGQ8_EGGLE  E=1e-48 s/c=0.98 id=37% cov=81%
-----------------------------------------IMLHKPAGFVTTMSDPQGRRTVAELVPTeryPGLFPIGRLDFDTTGLLLFSTDGELGNGLLHPKHHVTKRYLACVEGRPTERDLALLRRGIELDDGPTQPADVRVVEGGAARHAerlleipaavpprsskEYAAVCEGRATRRSIVRLGIREGRKRQVKRMLAAVGHPVLALHRDSFGPLELGDLPRGAWRAL--
>UniRef50_Q2JQ37(29-206:226) Pseudouridine synthase n=10 Tax=Bacteria RepID=Q2JQ37_SYNJB   E=2e-48 s/c=1.08 id=56% cov=82%
---------------------------------------RYLKFYKPYGVLTQFTDREGRPTLQSFIPVPRVYPVGRLDRDSEGLLLLTDDGRLNARLIDPKFGHERIYWVQVEGIPTPQALQQLQQGLIIQGRKTRPAQVKVLAEEPTLPPRDPPIRFRRSIPTTWLELTLREGRNRQVRRMTAAVGIPTLRLVRVGLGPLSLAGLAPGQWQDLSE
>UniRef50_B2T6J8(2-180:189) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=B2T6J8_BURPP   E=3e-46 s/c=1.04 id=47% cov=82%
----------------------------------------LLALNKPFGTICQFSPHETRASLADWVKVPDVYPAGRLDSDSEGLLLLTDDGALQARIAEPRHKLVKRYWAQVEGAVDAATLKKLARGVDLGDYVTRPCRAEYVEPTDALWTRTPPIRFRAAIPTTWIELSITEGKNRQVRRMTAAVGFPTLRLVRVGIGALDIfsLGLQPGESVELS-
>UniRef50_O67444(22-229:249) Uncharacterized RNA pseudouridine synthase aq_1464 n=4 Tax=Bacteria RepID=Y1464_AQUAE  E=5e-45 s/c=0.88 id=38% cov=78%
----------------------------------KPQRKRYIILNKPCCYLTQlGRSPDGRKTIEELIKdiPERVFPVGRLDYNTEGLLILTNDGELANRILHPRYKLPKVYLALVEGKVDQKTLKRMKQGIELEDGFAKPDNIRIV---------------RYEGKNTLLEITFHEGRKHLVKRFLGAFGHKVKRLKRIAIGPIKLGKLSPGKWRELNQ
>UniRef50_B0N6F1(41-225:241) Pseudouridine synthase n=3 Tax=Bacteria RepID=B0N6F1_9FIRM   E=9e-45 s/c=0.98 id=35% cov=74%
----------------------------------------YYVFYKPKGCVCTLDDEFDRPIITDYFTevKERIYPVGRLDFDTTGLIIMSNDGEFANMIMHPRSHLEKIYEVSIKGLITGPTLNKLEKGVYLEGVKTLPCKIKVVDKDTEH-------------KTTMLKIKLVEGKNRQVKKMFESVGHPVKRLHRVSIGGINLKGLTPGRYR----
>UniRef50_A9GX03(45-226:399) Pseudouridine synthase n=2 Tax=Bacteria RepID=A9GX03_SORC5   E=2e-44 s/c=0.99 id=37% cov=75%
----------------------------------------YVALHKPRNVVSTLRDPEGRPTVADHVRgtGARLYPVGRLDFATSGILLMTNDGDFANALLHPRGGVPKTYVLKVQGVMSDDDLTPWREGIRLEDGVTLPAEARLLRHEGDK---------------TWLEVTLREGRNQQIRRMGEATGWPVMRLARTTFAGVSSEGLRPGEWRALT-
>UniRef50_D1Y0J0(345-543:555) Pseudouridine synthase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0J0_9BACT  E=3e-44 s/c=0.90 id=30% cov=75%
----------------------------------------YVLLNKPKDYVTTSDDPQQRKTVMDLVKdacPERIYPVGRLDRNTTGVLLFTNDGDLASKLTHPKFLKKKVYHVFLDKPITANELQKISDGIELEDGEIKADAIEYANPEDQ----------------AQVGIEIHSGKNRIVRRIFESLGYRVVKLDRVMFAGLTKKNVRRGDWRFLTE
>UniRef50_A6LIA0(277-483:495) Pseudouridine synthase n=23 Tax=Bacteroidales RepID=A6LIA0_PARD8   E=4e-44 s/c=0.86 id=31% cov=75%
----------------------------------------YIVLNKPKNCVTTSDDPQERLTVMDLVKnacQERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPSFKKKKIYHVWLDKNVAIEDMEKIANGLELEDGEIHADAISYASEDDK----------------SQVGIEIHSGRNRIVRRIFESLGYHVTKLDRVYFAGLTKKNLGRGKWRYLNE
>UniRef50_A3M7K0(2-179:262) Pseudouridine synthase n=13 Tax=Acinetobacter RepID=A3M7K0_ACIBT   E=1e-43 s/c=1.00 id=54% cov=82%
---------------------------------------KIVILNKPYDVLSQFRKDEAHMTVSDFVDDPTLRIAGRLDMDSEGLVFLTDHGGLNQFITNPANKKYKTYLVQVDGDVTEEALEQLRKGVELNDGMTLPAKAIKVSEPEWLWDRDPPVRYRASIPTSWIEISICEGRNRQVRRMTSAVGFPTLRLIRTKIGTIDLVqlGLQPGETKEI--
>UniRef50_C8QZD4(43-227:240) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZD4_9DELT  E=2e-43 s/c=0.96 id=35% cov=74%
-----------------------------------------VLLNKPAGYVTTMADPQGRPIVTSLINEPglRLFPVGRLDLDTEGALLLTNDGELAQNILHPSRQINRTYHATVKGRPNREALQQLRRGIMLEGRRTWPARIR---------------ELRRNQESTTLEVIIHEGRKRQVRKMFAAINHPVLQLKRVAYGGLRLGSLPTGRYRRLS-
>UniRef50_B1ZYI5(4-179:188) Pseudouridine synthase n=2 Tax=Bacteria RepID=B1ZYI5_OPITP   E=2e-43 s/c=1.01 id=51% cov=80%
-------------------------------------------LHKPYGVLSQFTPEPGsrWRTLAEFGLPPAVYPLGRLDADSEGLLLLSDEPGLNTRLLNPDQAHRREYWVQVERVPTDAALAQLQRGVKIGDYATRPCAARRLDPAPTLPPRDPPIRARKNVPDCWLALELIEGKNRQVRRMTAAIGHPTLRLVRVRIGDFALGKLAVGQWRELT-
>UniRef50_B0MSS4(256-438:451) Pseudouridine synthase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSS4_9BACT  E=8e-43 s/c=0.96 id=33% cov=78%
-------------------------------SRVEGEKKVYLVLNKPKGYVTSLDDPHADKTVMELVKDactERIYPVGRLDKNSVGLLLFTNDGDLTRQLTHPSFQKKKIYQVSLDKPLTKADMEQIAQGITLEDGEIYADEIAYVKEDK-----------------TEVGIEIHSGRNRIVRRIFEHLGYAVKKLDRVYYAGLSKKNLKRGQWRFLT-
>UniRef50_Q11YT0(366-551:562) Pseudouridine synthase n=9 Tax=Bacteroidetes RepID=Q11YT0_CYTH3   E=2e-42 s/c=0.94 id=32% cov=84%
------------------YKVKPGDSVKYNNKVLNPEKSVYVLLNKPKDFITTMEDENDRKTVMQLVAnatKERIYPVGRLDRNTTGLLLFTNDGELAQKLTHPSNKVKKIYEVELDKPITAEDFDKIVDGkIHLFDGPVKVDEAAIISPSKKI-----------------IGIEIHEGRNRIVRRIFESLGYDVLKLDRVMYAGLTKKNIPRGSWRYLT-
>UniRef50_Q3AVD5(41-228:247) Pseudouridine synthase n=3 Tax=Cyanobacteria RepID=Q3AVD5_SYNS9   E=5e-42 s/c=0.92 id=42% cov=76%
------------------------------------QEPRVFLLNKPVGVICSCRDPQGRATVLDCLPHQersGLHPVGRLDADSRGALLLTDQGELTLRLTHPRYNHAKTYRVLVRGIPSSQALRRWRDGLLLDGRLTRPARVHCL---------------RSRGASSLLEVELKEGRNRQIRRVAELLGHPVIDLQRVAIDGIRLDDLAEGCWRRL--
>UniRef50_A0L6G3(95-298:332) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L6G3_MAGSM  E=5e-42 s/c=0.85 id=42% cov=75%
-----------------------------------------IILHKPKSIICTRSDPQGRRTIFDLIENHgssRLITVGRLDINSEGLIILTSDGQLAHGLMHPSREVPRVYRVKTHGILLASQLEQIRTvGVRLEDGPTGPLEIVL-------------DRGREQGNNSWYTITLREGRNREVRRIFDHFGLQVARLLRVGYGGISLGNLEPGAWRPVT-
>UniRef50_Q6F9V5(33-229:239) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V5_ACIAD   E=6e-42 s/c=0.87 id=31% cov=76%
------------------------------------REKVYIILNKPKGFECSHQ-PHHHQSVFSLLPdlliQRNIAAVGRLDQDTTGLLLLTDDGQYLHTLTHPKKHVPKVYHVATIDPITVDQMHQLEQGVELHNEK-------------GVFAATNVTLLNE----TQLSMTIHQGVYHQVKRMIAAVGNKVTALHRHKIGQLELPNLAEGEWMYLTE
>UniRef50_A8SLU4(32-221:230) Pseudouridine synthase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLU4_9FIRM  E=1e-41 s/c=0.91 id=34% cov=75%
--------------------------------------KKYYLLNKPIGYSSTAKAQFQEKIVLDLIDsKERIYPVGRLDKDSFGLLLLTNDGDLAFRLTHPSHNVEKEYIVKVDKTLKESDLKKLSSGIMLEGKITRKARFEMLDFKSNI-----------------VKVFLKEGRNRQIRKMFKTLDYNVISLERIAFGKIKLGKLKVGNYRELSK
>UniRef50_Q1J642(26-229:244) Pseudouridine synthase n=51 Tax=Streptococcus RepID=Q1J642_STRPF   E=1e-41 s/c=0.84 id=39% cov=75%
----------------------------------------YYLLNKPSGYVSATQDRQQ-ATVMELLDdtarQKTVFPVGRLDKDTRGLLLLTNNGQLAHDLLSPKKHVTKEYLAKVAGIMTEADKDYFARGISLKDHQCLPAHLEVLASD-------------LQQQTSLVKITIQEGKFHQVKRMVAACGKEVLDLQRLSMGPLKLDpSLAEGEFRRLT-
>UniRef50_UPI00016C3D27(41-226:271) ribosomal large subunit pseudouridine synthase B n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3D27  E=2e-41 s/c=0.91 id=41% cov=73%
--------------------------------------------NKPVGHLCTNHDPAGRPRAVDLLPhvEQRVYTVGRLDEGSDGLLLMTNDGDLAQGLTHPRYGVPKMYFVLVAGRPTDDDLQKLMDGVWLSDGKVRAKSAKRI---------------KAQGNGTWVRVVLTEGKNREIRRMLAKFGHKVMRLKRVAIGPVKLDKLPKGKARRISD
>UniRef50_B2A4P2(26-223:238) Pseudouridine synthase n=2 Tax=Clostridia RepID=B2A4P2_NATTJ   E=2e-41 s/c=0.86 id=41% cov=74%
----------------------------------------YIMLNKPKDYITSKDDPQGRKTVMDLIQvKERVYPVGRLDYDSRGLVLLTNDGELANRLMHPKYNIPKTYMVKVDKLPLQDKLDNLVNGIYLEEGLCKADHVEILDTK-----------------NNILKIILSEGRKRQIRRMLASLGIEVKDLKRDSLGTLTLKDLSEGNYRKLTK
>UniRef50_A4QE19(105-307:320) Pseudouridine synthase n=13 Tax=Corynebacterineae RepID=A4QE19_CORGB  E=7e-41 s/c=0.83 id=36% cov=76%
-----------------------------------NEDLEYFVLNKPRGMHSTMSDELGRPCVGDLVSEKtasgqRLFHVGRLDADTEGLLLLTNDGELANRLMHPKYEVSKTYLATVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGK---------------SLLRIEIHEGRKHIVRRLFDELGFPVERLVRTKLHTVQLGDQKPGSLRAL--
>UniRef50_A5V220(43-228:624) Pseudouridine synthase n=5 Tax=Bacteria RepID=A5V220_ROSS1   E=1e-40 s/c=0.90 id=37% cov=75%
----------------------------------------YVMLHKPAGVVSTTDDPQGRPTVIDLVNLEqRLFPVGRLDYDSEGLLLLTDDGELTQKLTHPSYQVEKEYRVLLNEAPSPAALRAWRTGVELDGVKTAPAWVELIE---------------RTPDGAWVRVILHEGRKRQIREVARVLGYEVRRLIRVREGPLTLGDLPSGTWRFLTD
>UniRef50_Q8ZGM2(25-223:235) Ribosomal small subunit pseudouridine synthase A n=134 Tax=Gammaproteobacteria RepID=RSUA_YERPE  E=4e-40 s/c=0.83 id=35% cov=73%
---------------------------------------RYFMLNKPQGYVCSTEDP-DHPTVLYFLDEPvayKLHAAGRLDIDTTGLVLMTDDGQWSHRVTSPRHHCEKTYLVTLEHPLSDDTAQQFADGVQLYNEKslTKPAQLDVIEPQ-------------------RVRLTISEGRYHQVKRMFAAVGNRVIELHRERIGDITLdDDLAPGEYRPLT-
>UniRef50_A0JV58(221-392:406) Pseudouridine synthase n=37 Tax=Actinobacteridae RepID=A0JV58_ARTS2   E=8e-40 s/c=0.96 id=38% cov=74%
----------------------------------------YMVFNKPKGVVSTMEDPDGRPCISDFVRNthgERLFHVGRLDVATEGLLLLTNDGELANRLTHPSYEVPKTYLVQVRGPFPQGIGAQLKAGVELEDGMASVDSFKLVDSTPGHV---------------LIEVVLHSGKNRIVRRLFDAVGFPVLRLVRVKVGPIGLGDQRQGSIRNL--
>UniRef50_Q04F57(44-229:237) Pseudouridine synthase n=2 Tax=Oenococcus oeni RepID=Q04F57_OENOB   E=2e-39 s/c=0.88 id=27% cov=76%
----------------------------------------YYLLNKPAGYVSSNRSYPNQPSVIELIKTKtRIFSVGRLDQDTTGVLLLTNDGELTQKLTHPKHRIKRTYAAWVKGIVNEDEIEQLTKPIRFDGEIYFPQAARIL-------------KVDQKRQESLIEITIAEGKNHEIKKILDFIGHPVIKLNRDMFDGITIGNLKKGQHRALSE
>UniRef50_C9L6I1(29-218:271) Pseudouridine synthase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6I1_RUMHA  E=2e-39 s/c=0.86 id=33% cov=86%
------------KPAVQGMQVEDFQEIKVDGKAIKREEKKVlLVFHKPKGIECTAN-PNVKKNVISYINYPiRVYYAGRLDKDSEGLLLLTNQGELVNQIMKAGSYHEKEYLVTVDKPVTEEFLQSMREGVPVLGTITRKCKVEKESEK-------------------VFRITLTQGLNRQIRRMCNYLGYEVVKLKRIRIMNIELGNLPIGSYREATK
>UniRef50_B0RHF4(50-249:291) Pseudouridine synthase n=3 Tax=Actinobacteria (class) RepID=B0RHF4_CLAMS  E=2e-39 s/c=0.82 id=35% cov=76%
--------------------------------------KRYLMLNKPVGIYSSLRDERGRPdlREFTEEFEERLFNVGRLDAETSGLLILTNDGDLAHVLAHPSFGVLKTYIAKVTGRVTPQTIQRLTQGVDLEDGPIQADRARILSG---------------GGDQTLVEITLHSGRNRIVRRMLDEVGHPVEELVRRQFGPLHLGSLGVGRVRDLT-
>UniRef50_B3QY10(85-266:297) Pseudouridine synthase n=10 Tax=Chlorobiaceae RepID=B3QY10_CHLT3   E=3e-39 s/c=0.90 id=36% cov=76%
----------------------------------ENTQKIYILLNKPKDVVTTSSDEKSRKTVVELVGlKDRVFPVGRLDRDTTGVLLLTNDGDLTYRLTHPTFGVQKQYVATLDKKITSVDLQNIKKGFRLKDtgEKVSPCNARILDDGYTIW------------------VAIHEGKNHQIHRMFWSFGYNVKKLVRVAYGGLEVGTMRRGEWRFLTQ
>UniRef50_A3JIZ1(82-286:367) Pseudouridine synthase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIZ1_9ALTE  E=3e-39 s/c=0.80 id=34% cov=75%
---------------------------------------RVLIYNKPEGEVTTRKDPEGRPTVFDRLPrlrEHRWISIGRLDLNTTGLVMFTTDGELANRLMHPSSEIDREYAVRIFGEVDDAMIERLRTGVTLEDGEAKFSDISAAGG---------------TGMNRWFHVTLLEGRNREVRRLWESQGVRVSRLKRVRYGSIFLPSrLTVGKWEEL--
>UniRef50_C5CXG1(239-426:604) Pseudouridine synthase n=4 Tax=Comamonadaceae RepID=C5CXG1_VARPS   E=4e-39 s/c=0.87 id=32% cov=80%
------------------------------RYRIAPPPPRVIAYHKPVGEVVTHDDPQNRPTVFRKLPrlqQGKWQSVGRLDLNTEGLLLFSSSGDLANQLMHPRFGLEREYAVRVLGALNAEEKKKLLEGVRLDDGMAQFGTI---------------EEGGGEGSNHWYRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPrGLKRGAWMELDE
>UniRef50_Q1J0B9(45-223:253) Pseudouridine synthase n=5 Tax=Deinococci RepID=Q1J0B9_DEIGD   E=5e-39 s/c=0.91 id=40% cov=72%
-----------------------------------------FLLYKPAGYVTTARDEYGRRNVLSAMPPiPGLHPVGRLDKDSEGLLLLTTDGQLTLTLTHPRYGHEKAYRAWTAGQPVAAELRVLETGIELADGPARALSARPARGGA--------------------LVTLTEGRNRQVRRMLDAIGYPVHRLLRYRVGGLWLGDLEPGEYRLLS-
>UniRef50_Q6MIA3(20-212:265) Putative pseudouridylate synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIA3_BDEBA  E=4e-38 s/c=0.83 id=36% cov=78%
--------------------------------KPLRKPltqKIYAILNKPTGVLTTMDDPHDRPTVAEYLTelPVRVFPVGRLDWDSEGMLLLTNDGDFANKVMHPKAEVTKTYLVKLNGKPEPFQLEKLKKGVSIVGGKVSARHIEKIKKTG----------DNKSEKYEWYKIVITEGKNRQIRQMFAKIGFDVMRLQRVAIGRLRMGAVKTGE------
>UniRef50_C9LMF3(49-264:277) Ribosomal small subunit pseudouridine synthase A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMF3_9FIRM  E=2e-37 s/c=0.73 id=28% cov=81%
----------------------------------------YYMLNKPAGVITATEDRYQ-KTVLDFFGERRrkdLSPVGRLDKDTVGLLLVTNDGGFHHRLLSPKKHIDKEYYARIDGRVDEADREKFEKGIYVDEIFTaLPAKLMIdgyrenaLESDFMDLANSRAPKSALENGVSEIRVVVQEGKFHQIKRMFHALGKEVIYLKRIRIGSVVLDpTLEEGTYRRLT-
>UniRef50_Q31GA0(64-249:317) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q31GA0_THICR  E=2e-37 s/c=0.84 id=37% cov=79%
----------------------------------EKQPTQVILYNKPEGQVCSRKDEKGRETIFTSLPRiinSRWISVGRLDINTSGLLILTNNGELANRLMHPSYEMEREYSVRVFGEVSDEILDRLKKGVKLEDGFAKFESIGKIPQQ------------EEDSINQWYRVVIKEGRNREVRRIWESQGVQVSRLVRTRYGQFSLPrNLRRGKSEPLT-
>UniRef50_Q6G8H4(22-222:231) Pseudouridine synthase n=61 Tax=Firmicutes RepID=Q6G8H4_STAAS   E=3e-37 s/c=0.78 id=38% cov=73%
----------------------------------------YIMLNKPKDYISATED-HHSKTVIDLIPEYqhlNIFTVGRLDKDTEGLLLITNDGDFNHELMSPNKHVSKKYEVISANPITEDDIQAFKEGVTLSDGKVKPAILTYIDNQTSH-------------------VTIYEGKYHQVKRMFHSIQNEVLHLRRIKIADLELDsNLDSGEYRLLTE
>UniRef50_A9ITY6(159-350:588) Pseudouridine synthase n=6 Tax=Betaproteobacteria RepID=A9ITY6_BORPD  E=3e-37 s/c=0.82 id=35% cov=76%
------------------------------------KPPRVILYHKPAGEIVSHDDPGGRASVFARLPKLRtgkWLSVGRLDLNTEGLLIFTTSGDMANRIMHPRYGTEREYAVRVLGEMDDATRKSLVEGIELEDGQAAFGALDYLGGDGS---------------NRWYRVTLQEGRNREVRRMFESVGVTVSRLIRTRFGDLVLPrTLRRGRWEEL--
>UniRef50_A5CX60(37-228:241) Pseudouridine synthase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=A5CX60_VESOH  E=4e-37 s/c=0.82 id=32% cov=81%
----------------------KIDGRKINLSRYVEQETKVIILNKQAGVICSNRDDKGRKSVYSLLPKEsRWIMVGRLDLNTSGLLLVTNNGDLANKLMHPSSEIDREYAVRVLGQVKNKDLKKLTQGVVFDDGFSKFNQITFSGGKGA---------------NRWYKVVLREGKKREVRRLWEVLGFKVSRLIRIRFGEIRLpDNLKANQY-----
>UniRef50_A5Z4I7(1-160:175) Pseudouridine synthase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4I7_9FIRM  E=4e-37 s/c=0.97 id=37% cov=71%
-------------------------------------------LNKPAGVLSAVSDN-NCKTVIDLLdvtPKKGLFPVGRLDKDTEGLLLITNDGELSHNLLSPAKHVDKTYYVELNGDLIDSDIELFEKGLDIGEKnLTKPAILKILE------------------KRSTALITITEGKYHQVKRMFQAIGLTVTFLKRLTMGPLKLDeNLKPGEYRKLT-
>UniRef50_A0Z9D8(24-204:229) Pseudouridine synthase, Rsu n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z9D8_9GAMM  E=1e-36 s/c=0.86 id=34% cov=72%
---------------------------------------RYIMLNKPPGMVSATCDEQ-HSTVLDLVSAPNaksLHIVGRLDFNSTGLLLLTNDGRWSRGVSSPQKGVVKTYRVQLEQPFRSDYREAFAAGLYfaFENITTRPAEIRRLSDLSRGRSV--------------------EGRYHQIKRMFGYFNNRVLNLHRLSIGALSLDpKLHQGAWRELT-
>UniRef50_C1A8K5(61-223:237) Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8K5_GEMAT  E=1e-36 s/c=0.95 id=33% cov=75%
--------------------------------------HRWIVLHKPAAVMTTRKDPEGRATVFDLVDDaPGLVYVGRLDFMTEGVLLLTTDGTAAHVLTHPSHEVERTYVATVRGDAVTAAREA-RRGVKLDDGLVVPSEVTAYPLGERRWA---------------FELTITEGRTHEVRRICDALGLEVERLVRTRFGPVRLGELPSGAARALT-
>UniRef50_C5EVC9(92-261:294) Pseudouridine synthase n=6 Tax=Clostridiales RepID=C5EVC9_9FIRM   E=3e-36 s/c=0.90 id=34% cov=76%
----------------------------ADSRKPKP---VLLVVNKPRGIVCTTSDKDRAMNIVEYLDyPERIYPVGRLDKDSEGLLLMTNQGDLVNKIMRSGNAHEKEYIVTVDRPLTDDAMDRMAKGIYLRelETVTRPCKVKRVDGKT-------------------FSIILTQGLNRQIRRMCEACGCHVERLVRVRIMNIRLDGLETGASREV--
>UniRef50_A0NV51(143-325:520) Pseudouridine synthase n=2 Tax=cellular organisms RepID=A0NV51_9RHOB  E=3e-36 s/c=0.84 id=35% cov=75%
--------------------------------------TRLWLYHKPRGLVTTNKDPEGRPTVFERLPDdlPRVLTVGRLDINTEGLLLLTNDGGLARVLELPATGWLRRYRVRAFGKVTQPDLDTLKDGIAIEGVLYGAIEATL---------------DKEQGNNVWMTVGLREGKNREVKRVLEHLGLAVNRLIRLSYGPFQLMDLPEGDVREI--
>UniRef50_D1N1S2(32-227:241) Pseudouridine synthase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1S2_9BACT  E=8e-36 s/c=0.78 id=37% cov=73%
----------------------------------------YIMLNKPRGYVCTNADPHADLKAVDLIrltPPLRLFSAGRLDKDSEGLILFSNDGDYVARLTHPRHEILKVYQVRVRREFKPAELEQMRRGVLERGELLKVHAVSRCGDCTYL-------------------ITLNEGKNREIRRLTAALGSPTRRLKRLQIGALRLGGLPVGNWRELT-
>UniRef50_C8PVP6(2-181:234) RNA pseudouridine synthase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVP6_9GAMM  E=1e-35 s/c=0.84 id=48% cov=79%
----------------------------------------LILFNKPYGVLSQFrsDDNNNFATLSDYFTDKSLRVAGRLDATSEGLLLLTADGQVNKALTHPpkanaGKQQGKTYWIQVEGDASDAQLQQLQTGVPLKDGITLPAEVVRLSEAQIAEHIWQASdKIAKRKVTTWLAITIFEGKNRQVRRMAAHVGLPCLRLIRMASSGFSLGNLEVG-------
>UniRef50_Q87NB7(44-232:312) Ribosomal large subunit pseudouridine synthase B n=17 Tax=Bacteria RepID=RLUB_VIBPA  E=3e-35 s/c=0.79 id=33% cov=75%
---------------------------------------RVLAYYKPEGELCTRHDPEGRRTVFDRLPKirgSRWISVGRLDANTSGLLLFTTDGELANRLMHPSRQVEREYLVRVFGEVTEQKVRNLVKGVELEDGLARFEDVVYAGGEGMNHTFY---------------VVINEGRNREVRRLWESQECTVSRLKRVRYGDIFLDkKLPRGGWMEL--
>UniRef50_C6VS09(9-193:225) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VS09_DYAFD  E=3e-35 s/c=0.81 id=32% cov=82%
-------------------------------------PHRYFIINKPPNMVSQFVSSHDVRLLgeLDFDFPEGTHAVGRLDSMSEGLLILTTNKKVTNLLFLGEVPHTRTYWVNVGHIVPPETVQLLRTGIPIRVKgggyyTTAPCEVEVIERPAILPW--HQSEGQPGVPNTWLSITLTEGKYHQVRKMVREANHRCKRLVRASIEDLELGDLPPGGVREIGE
>UniRef50_B0S303(22-224:235) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S303_FINM2   E=3e-35 s/c=0.74 id=33% cov=73%
----------------------------------------YFVMNKRKGVTSHSKDP-MHKTVIDDMGELCVFdlnPVGRLDLDTTGLLIITNDGKFAHNLISPKKDVSKKYKVTLRDKVDEKYNDTFEKGIKLmpEDIVTKPAKMEIIDDYNCY-------------------LTIKEGKYHQVKRMFEKVGNEVVELQRVQIGDFKLpEDLEEGDFRELTD
>UniRef50_B9ZS86(30-227:318) Pseudouridine synthase n=2 Tax=Chromatiales RepID=B9ZS86_9GAMM   E=5e-35 s/c=0.75 id=34% cov=77%
----------------------------------AEHAHRWLVYHKPVGEICSRSDPEGRKPVFASLPRlkgQRWVAVGRLDLNTSGLLLFTTDGELANRLMHPSHSLEREYAVRVLGEVPDDTRRMLLEGVELEDG---PARFDVLEERGG------------DGANHWFHVVVSEGRNRLVRRLWDAVGVTVSRLIRVRYGPVVLGrGLKTGASRDL--
>UniRef50_C5BI29(41-228:238) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=C5BI29_TERTT  E=1e-34 s/c=0.79 id=32% cov=72%
----------------------------------------YLMLHKPAGYVCANTDAE-HPTVFDLpgfsarysnADIARLQIAGRLDLDTTGLVLITSDGQWNHRITSPRQKCRKAYYVECAAPIAAETKSAFAEGVLLHGekRPTLPAELELLSANTA-------------------NLYIEQGIYHQVKRMFASTGNKVLRLHRFQIGALALEtDLLPGDMRALT-
>UniRef50_A5WGV6(73-271:345) Pseudouridine synthase n=7 Tax=Moraxellaceae RepID=A5WGV6_PSYWF   E=1e-34 s/c=0.74 id=34% cov=70%
---------------------------------------RVLAYYKPEGEICSANDPEGRTTVFERLPKlthDRWIMVGRLDINSTGLLLFTNDGELAHRLMHPSNEIVREYAVRILGELTPEMMRNLTDGVMLEDGLAKFEDIKQGGGEGV---------------NKWYHVKLKEGRNREVRRLIESQGLKVSRLLRTSYGSVDL-------------
>UniRef50_C5SKU3(103-273:489) Pseudouridine synthase n=2 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKU3_9CAUL  E=2e-34 s/c=0.86 id=36% cov=78%
------------------------------------EPTRVWRYHKPVGLMTTHQDPQGRPTVFNSLPQelPRVISVGRLDINSEGLLLLTNDGELARALELPTTGWTRVYRVRALGRTTQEALDTLKTGVTVEGVQYGPIEAKL----------DKAQEKADGRANLWITVSLNEGKNREVRKVLDSLGLKVNRLIRLAYGPFQLGDIEPGEVEEI--
>UniRef50_Q0F0K3(34-231:249) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0K3_9PROT  E=6e-34 s/c=0.74 id=30% cov=85%
---------TVQGEAAESPAQKVFASDVLLEGEPLDHPDGLtIIYHKPLDTVCSRK--EGGRLIYDDLPARWLdrkppfSPVGRLDKDTSGLLIVTDDGQLNHCLTSPKQHISKTYSVTLAEPLQGREAEIMAAGTLLlenDDRPCLPAELIVHSP-------------------TQASLTLHEGRYHQARRMFVALGNHVTALQRTHIGALALKDtgLKPGEYQ----
>UniRef50_A6BG46(23-212:216) Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A6BG46_9FIRM  E=9e-34 s/c=0.76 id=30% cov=81%
----------------------------------------YYMFHKPFGCVTARRDDR-YPTVMDYFEElqnDRLSPVGRLDRETTGLLLITDDGIFNQKLTHPSYHKEKTYEFTLLGDLTPELVHKLETGVILKgaDTLTAPAKITVTGHAVmsdilstlPEEIQKDIHKNRPDHPITYGIITISEGKKRQIRRMMKSVHCCVIELKRISIGDIVLDKaLCPGEWKEI--
>UniRef50_A7VSS7(27-232:256) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A7VSS7_9CLOT   E=1e-33 s/c=0.70 id=37% cov=76%
------------------------------------QRHVYLMMNKPAGVVSASRDSR-EKTVVDLVPPvlsrRDLFPAGRLDRDTTGLLILTDDGELAHRMLSPKKHVYKLYEASVDGPVGAEEIEKFAAGVALEDGTvCLPAGLTVVKQGTAWE--------------TLVE--IREGKFHQVKKMFLAVGRRVLRLKRVRIGGLELDKtLKEGECRELTK
>UniRef50_Q5F8V3(125-326:350) Pseudouridine synthase n=21 Tax=Proteobacteria RepID=Q5F8V3_NEIG1   E=2e-33 s/c=0.71 id=34% cov=79%
------------------------------KLKWADRLPRIILYYKQEGEIVSRDDPQGRVSIFDRLPQAassRWVAIGRLDINTSGLLILTTSGELVQRFAHPSFEVEREYAVRVLGGLTTEQMRSLtEEGVMLEDGL---AKVERIYEQGG------------EGANKWYNIVIKEGRNREVRRIFESQGLTVSRLVRVAFGPIGLPNrLKRGQFYEL--
>UniRef50_Q4Z2R8(123-307:318) Pseudouridine synthetase, putative n=3 Tax=Plasmodium (Vinckeia) RepID=Q4Z2R8_PLABE  E=2e-33 s/c=0.78 id=31% cov=79%
---------------------------------------KWIVMHKPKGLICTNQDEKDRKSIFsifpdDLLQKYRIVSVGRLDRNTSGVLLFTNEYTWVNKLTHPKYERVRKYMIHIEGPVRMDALKMLANGVYLKDEdnnkkkkkKTQPAFIEVLREENVK-------IQNQIKKITVLNISIKEGRNRQIRKMFQQINQPIVKIKRTAFENITLKNIHlPKQYRELTK
>UniRef50_C4XEA6(65-245:269) Pseudouridine synthase n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEA6_MYCFE  E=3e-33 s/c=0.79 id=24% cov=72%
----------------------------------------YFLLNKPKKTISTVKDPKGRKTVVDLINySERIAPVGRLDYDTTGALLLTNDWEMINKLTHPKYEILRTYRVRIDSPLSLKEFKLINAGL-IVNGKFSKQIVDQVDTKSYL-------------------VTLHVGSYHHIKELFKALNHEVINLKRVSFANLTVEKMPEGSYRTLT-
>UniRef50_A6D701(1-155:164) Pseudouridine synthase (Fragment) n=2 Tax=Vibrionaceae RepID=A6D701_9VIBR  E=4e-33 s/c=0.92 id=35% cov=63%
--------------------------------------------------------------LLDEVKMENLHFAGRLDVDTTGLVLITDDGQWSHRITSPKHKCAKTYRVWLADPVQDNYIKAFEEGIELRNEkaPTLPAQLEIIDEKE-------------------VLLTIHEGKYHQVKRMFAALGNKVEGLHRESVGDIVLDEmLEPGEYRYLTQ
>UniRef50_Q26G32(121-317:326) Ribosomal large subunit pseudouridine synthase F n=2 Tax=Flavobacteria RepID=Q26G32_9BACT  E=4e-33 s/c=0.73 id=25% cov=77%
----------------------------------QPYQKQYLLLNKPKGFIAPRKGERASKTVLDLMQSAGVanlHYVGRLGRQSVGLMLFTNDLEMANKLNNPNLEMRKIYQVALDRSFKHEDLMQLRNGIAINGEVIDVKEINYVED----------------GRNNEIGIEIHSGKDNIVQALFEAVKYEIKVLDRVVLGGLTKKDLPRGHYRALTE
>UniRef50_B7J5G3(48-241:251) Pseudouridine synthase n=3 Tax=Acidithiobacillus RepID=B7J5G3_ACIF2   E=2e-32 s/c=0.73 id=32% cov=77%
--------------------------------EPIDHPHAfYLLYHKPLGKVCAHDDP--RAIYQDFplrwrYRRPALSSVGRLDRETSGVLLLTDDGDWLHHWTSPRRAIPRVYRVTLQEPLRSDAADILAAGTLMLDGEDTPCR----------PAALHCLTERE------VRLTLTEGRYHEVRRMFAALDNLVLTLHREAYGPFLLDDLPAGQWRELT-
>UniRef50_UPI0001BC54DC(66-229:239) ribosomal large subunit pseudouridine synthase B n=3 Tax=Fusobacterium RepID=UPI0001BC54DC  E=8e-32 s/c=0.85 id=36% cov=75%
----------------------------------------YYLLYKEEEVLSAVKDDRGRRTVVDCVLSPyRIFPVGRLDYRTSGLILLTNDGDLFNRMMHPRAEIFKSYEVLAKGHLTKEQLKTLEEGVELEEGKTLAALIAKV---------------KYEKGNTFFEISIREGKNRQIRRMVEAVGSRVYRLRRTKIGKLSLDGLSLGEYRALEE
>UniRef50_B3PMD0(29-230:251) Pseudouridine synthase n=2 Tax=Mycoplasma RepID=B3PMD0_MYCA5   E=1e-30 s/c=0.67 id=25% cov=75%
-------------------------------------PKFYLVFNKPKNTICTLKDPEKRKTIYEYMGlKEYAYSVGRLDFNSTGIILVTNDGDFANLIAHPSANIKRVYEVVLEKELSEGDFNYLNSNKVILNGKKSSQSLSKLAPFKYS-------------------VSLYEGRNHHVKNLFLLVNNYVKELHRVSYGPITDANLKIGKTRHLSE
>UniRef50_Q0BE12(481-685:690) Pseudouridine synthase, Rsu n=7 Tax=Burkholderia RepID=Q0BE12_BURCM   E=2e-30 s/c=0.65 id=35% cov=77%
------------------------------ERASAAQAAQVtILLHKPVGYVSgQAEDgyepasvlitranqWSGDRSPLRFSPQhlHALAPAGRLDIDSTGMLVLTQNGRIAKQLIGEQSDIDKEYLVRVrfgerlldiDQHFPAESLAKLRHGLELDGVALKPAMVSWQNGEQ-------------------LRFVLREGKKRQIRRMCELVGLEVIGLKRVRMGRVMLGALPQGQWRYLS-
>UniRef50_Q9ZJG0(45-242:262) Uncharacterized RNA pseudouridine synthase jhp_1352 n=37 Tax=Epsilonproteobacteria RepID=YE59_HELPJ  E=4e-29 s/c=0.66 id=28% cov=64%
-------------------------------------------------------------------------PVGRLDFASEGVLLLSDSKAVVSALMHA--NLEKEYLVKIQGFVTREMENAMQEGLKLENA-TKGAHQKTPIKSMEFAPFIGYEIIKNHAKYSKLRVIINEGKNRELRRFFAFFNAGVLDLRRVRYGFVNLNALPVGKAR----
>UniRef50_A4S9F7(96-278:287) Predicted protein n=3 Tax=cellular organisms RepID=A4S9F7_OSTLU   E=7e-29 s/c=0.70 id=33% cov=61%
---------------------------------------------------------------------PSIESVGRLDKDTSGLLLLTDDGALVHALTTPKKEIGKWYRVKTDRPIPRDAVEVFASGELTLDGETRACK---------------PAVCELMDDETEARLRLTEGKFHQVKRMFAFFGCTVIGLHRESFGSLTLERAgvsEPGDFKTL--
>UniRef50_C6XI22(75-243:315) RNA-binding S4 domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XI22_HIRBI  E=3e-28 s/c=0.75 id=35% cov=58%
-------------------------------------------------------------------------PVGRLDKDSRGLLILTEDGVLTKAVIGPDADSEKEYLVTVNGTITHEKIRRLCHGLRMDGRALKPAIVTHEGGQ-------------------VLRFILTEGRNRQIRRMAELVQLHVVDLFRIRIGHVHIGELPEGKWRTMT-
>UniRef50_C4Z0B5(60-276:333) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0B5_EUBE2  E=8e-28 s/c=0.58 id=26% cov=68%
----------------------------------------VIFINKPSGMLSQKAKPEDV-SLVEYLIAHLIHkgelnagdlasfkpgICNRLDRNTSGIVAAGKTTKGLQQLseAFKQRTLGKYYLCIVKGNVDK---RALIKGYLYKDNKTNKVTISRTETKDSLPIETEYIPVCSNGNVTLLKIHLLTGRSHQIRAHLASIGHP---------------------------
>UniRef50_C1FFP6(70-256:257) Predicted protein (Fragment) n=4 Tax=Mamiellales RepID=C1FFP6_9CHLO   E=8e-28 s/c=0.67 id=25% cov=61%
---------------------------------------------------------------------PRLFTVGRLDVNTTGMLLVTTDGQWCQRVAHPSSQIPKSYIVTAATRPTKAQIKKMAEGCEVDGVHVTPLRVESMEGA------------RDGGPAHRILVDVVDGRNREVRVLSASAGVDVKKLKRVRVGGLRMPsELPIGKY-----
>UniRef50_C9YDN9(45-276:282) Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDN9_9BURK  E=1e-27 s/c=0.54 id=40% cov=57%
-------------------------------------------------------------------------PAGRLDIDSTGLLVLTQDGRVARQLIGEDSVMEKEYLVRVAytgvenpgaanspaatypalagrGKPqqlirlddddpvtsdvqsvfPPEKLQLLRHGLILDDQRLKPAKVEWQNPEQ-------------------LRFVLTEGKKRQIRRMCELVGLKVVGLKRVRVGKVMLGNLPVGQWRYL--
>UniRef50_Q82WZ5(110-271:344) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Nitrosomonas RepID=RLUD_NITEU  E=9e-27 s/c=0.75 id=23% cov=54%
--------------------------------------------------------------------VPRAGIVHRLDKDTTGLLVVAKTIEAQFDLARqlQQRTVKRHYLALVLGKLEKDGV------VDAPIGRHPIHRTRMAVVQNGKPARTHYRVLEKFTASTLLHCSLETGRTHQIRVHLLSIGHP---------------------------
>UniRef50_A9BMW0(127-310:356) Pseudouridine synthase n=10 Tax=Comamonadaceae RepID=A9BMW0_DELAS   E=2e-26 s/c=0.66 id=20% cov=57%
--------------------------------------------------------------------VPRAGIVHRLDKDTSGLMVVARSRAAMDALvaMIAARDVSRQYLALAHKAWGPRKHREVDAPIGRDPRNRLRMAVVDLAQHAGKTARTDIDLLAGNEEVSLVRCTLHTGRTHQIRVHMASLGHP---------------------------
>UniRef50_A3RGY8(72-282:353) Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=A3RGY8_9BACT  E=3e-26 s/c=0.57 id=27% cov=68%
----------------------------------------ILVLNKPPKLVVHPAAGHWSGTLLNgllayaptLIDVPRAGIVHRLDADTSGLMVVAKTLAAQTDLvrQLQSRTVTREYWALVLGVPSQRGVIDAAIG----RDPRNPLRFKVSTTEAAKPARTHYATLdstkNAGADISWLACRLETGRTHQIRVHLEHVGHP---------------------------
>UniRef50_Q6LQS3(69-224:240) Pseudouridine synthase n=1 Tax=Photobacterium profundum RepID=Q6LQS3_PHOPR  E=3e-26 s/c=0.77 id=31% cov=57%
----------------------------------------YIVLNKPKGVVSATKDIK-HSTVLDLIqhsQKNELHIVGRLDFNTTGLVLLTNDGAWSRKISLPETKLAKVYEVTLSKPLSDEYITVFREGIYFgyEDITTKPACLEILSEYTA-------------------RLSLVEGKYHQVKRM----------------------------------
>UniRef50_C7RM56(203-409:415) RNA-binding S4 domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RM56_9PROT  E=4e-26 s/c=0.58 id=33% cov=59%
----------------------------------------------------------------------GLAVAGKLDTEEHGMLVFTQDGSVARRLTGGGARLENEYHLRVQGELSPDGLQLLRHGLSLDNVRLERAQVSWLSEQQ-------------------LRFVVHENRKRQIQRQCELVGLQVTDIKRVRIGGVSLGKLPPGQWRYL--
>UniRef50_A1HR26(77-242:301) Pseudouridine synthase, RluA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR26_9FIRM  E=1e-25 s/c=0.71 id=23% cov=68%
----------------------------------------LLIVNKPAGLLVHPTSDPTEPTLAHgilyYLHSKGalgaFHPIHRLDRNTSGLVAIAKHPHIQHALSgGGAKGLKRLYLAVVTGIPSSLMGR-----IDAPIGRHPNSIIKRVVRSDGQPAITLYRVLSTFSMASLVELELLTGRTHQIRVHLSHIGHPLL-------------------------
>UniRef50_B1I3F8(85-263:309) Pseudouridine synthase n=2 Tax=Bacteria RepID=B1I3F8_DESAP   E=2e-25 s/c=0.65 id=30% cov=51%
----------------------------------------------------------------------------RLDRDTSGLLMVAKNDAAHLALAGQlkDRAVLRRYTALVHGRPRRETGT-----VDAPIGRHPRDRQRMaVTPRSGRAARTHYRVVRRFDKFSLLELTLDTGRTHQIRVHMAHVGHP---------------------------
>UniRef50_Q8I5D9(370-557:564) RNA pseudouridylate synthase, putative n=2 Tax=Plasmodium RepID=Q8I5D9_PLAF7  E=3e-25 s/c=0.62 id=25% cov=59%
--------------------------------------------------------------------VPNLYVCGRLDANSSGLLIFTQNTLSNNYLLYRyKYNIEKEYVIKTYNSITQENMKLLKEHFYVDGKLIYKCHIQYVD------------------NFTLI-FKIYQGFHKIIRKMCMLSNIKIKSLHRIRIGNIHLNDLPIGKWR----
>UniRef50_B9DS29(78-255:301) Pseudouridine synthase n=85 Tax=Firmicutes RepID=B9DS29_STRU0   E=5e-25 s/c=0.65 id=25% cov=56%
-------------------------------------------------------------------PNKQVHIVTRLDRDTSGLMLFAKHGYAHARLdkQLQKRSIEKRYFALVSGNGQLPDFGEIVEPI----GRSKDSIITRTVDPMGKYAKTTYeVVARFAENVHLVDIKLHTGRTHQIRVHFSHIGFPLL-------------------------
>UniRef50_B2UL66(30-251:323) Pseudouridine synthase n=2 Tax=Verrucomicrobiaceae RepID=B2UL66_AKKM8  E=1e-24 s/c=0.52 id=31% cov=42%
-----------------------------TVRIPEPEPAEaqpqdipldilyededVVVINKESGMVVHPAAGNPDGTIVNALlhhcgdlsgigGVERPGIVHRLDKDTSGCLVIAKNDGAHQSLTaqFAARSTEKRYLAVVQGIPSQ--------------------------------------------------------------------------------------------------
>UniRef50_C3RIE2(47-251:294) Pseudouridine synthase n=4 Tax=Bacteria RepID=C3RIE2_9MOLU   E=2e-24 s/c=0.56 id=25% cov=27%
----------------------------------------LIVINKPAGLLSMAGGNEKEKTAYHLVgeylksknKNARVFIVHRLDKETSGVLLFAKNEIIKNKL-----------------------------------------------------------------------------------------------------------------------
>UniRef50_C5TPY8(30-209:264) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=C5TPY8_NEIFL   E=2e-24 s/c=0.63 id=28% cov=53%
----------------------------------------------------------------------HVYPVHRLDRPTSGVLLFALDTEAARLLTQQfeNKTIEKTYWAIVRGYLPSDGLIDYAL-------KYMPDKIaEAQTEATLQEAQTAYRCLAQTElpfqsalryptsRYSWAELTPYTGRKHQLRRHMKHIFHP---------------------------
>UniRef50_B6KG51(7-279:286) 16S pseudouridylate synthase, putative n=3 Tax=Toxoplasma gondii RepID=B6KG51_TOXGO  E=4e-24 s/c=0.41 id=41% cov=65%
--------------------------------------------------------------------------AGRLDVDSTGLTVFTQDGRLASQLVGPGKRVSKEYHVEVDLPVSAGALTLLRHGLSLDGLELLPAKVRLLSPlrdaffsplptstvsissfpsrsgsrpvsetpahlctdfrqgesisspsltvsvsssvaakekpgdrraEDEEADAEVKESEMWVGKTTRLSIELLEGRHRQIRRMCELVGLRVLKIHRIRIGKVSLGNLPQGRWR----
>UniRef50_C5RCG6(68-252:297) Pseudouridine synthase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCG6_WEIPA  E=8e-24 s/c=0.61 id=20% cov=68%
----------------------------------------LMVVNKRKGVKTHPNSPGENGTMMNFAqaylmkQDKRAYMVHRLDGQTTGALIIAKVPYVVPILnqMLHDKTIKRTYLAWVDGHLTDSTGAIT---LAIGDHPTN-SRLRQIDGANAKPAITHWTKIKSVYQQTLVRLQLETGRTHQIRLHMAAIGHP---------------------------
>UniRef50_B3LCR9(259-461:469) Rna pseudouridylate synthase, putative n=2 Tax=Plasmodium (Plasmodium) RepID=B3LCR9_PLAKH  E=1e-23 s/c=0.55 id=28% cov=57%
-----------------------------------------------------------------------LYVCGRLDANSTGLLVFTQNTLLCSYLLNKhKHQVEKEYMIKTAEPIEEVHMELLRKNILVDGKLIYKCRIQYVDSFT-------------------LSFTLYQGFHKIIRKLCLLSNIKIKALHRVRIGGIHLKGLPLGKWR----
>UniRef50_B0T2G2(45-236:286) Pseudouridine synthase n=6 Tax=Caulobacteraceae RepID=B0T2G2_CAUSK   E=1e-23 s/c=0.58 id=21% cov=61%
----------------------------------------------------------------------------RLDRDTSGVILTARTKPAATFLGKAlmGKRFRKTYWAIVTPGAPEPRGGQIDSPLRREsIGREAYMRVCEADHPDAETARSRYRTLAATEGAALVELSPDTGRMHQLRVHMASIGRPIAGDSRYG-GALMLGGAP---------
>UniRef50_C9KPZ8(59-256:308) Pseudouridine synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPZ8_9FIRM  E=1e-23 s/c=0.56 id=21% cov=53%
-------------------------------------------------------------------------IVHRLDKDTSGVMVAAKNDAAHLDLAEQIRTkaAHRIYRAIVCGNIREEAGV-----IKGDIGRHPTDRKKMaIVHEHGKPAVTHFRVLERFGAYTLVECRLETGRTHQIRVHMASIGHPVL-------------------------
>UniRef50_Q0BUM2(118-303:366) Pseudouridine synthase n=12 Tax=Acetobacteraceae RepID=Q0BUM2_GRABC   E=2e-23 s/c=0.60 id=26% cov=60%
----------------------------------------------------------------------------RLDRDTSGVIVIARSPGVAAKLAalFRTRETEKVYWAVVAGRPVPVEGRIDRPLLRQNDRNEPVVLADRKDRDKVTAITDYRTLDHAARKLAWLELRPLTGRMHQLRVHCAAMDAPILGDERY------------GSWRNTDE
>UniRef50_Q49WX8(45-256:305) Pseudouridine synthase n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q49WX8_STAS1  E=2e-23 s/c=0.52 id=23% cov=50%
------------KTKMNDHIVVTEKETVEADIQPENlnldiyyEDDDVAIVYKPKGMVVHPSAGHYTGTLVNGLmyqmknlsginGEIRPGIVHRIDKDTSGLLMVAKNDVAHRSLVDQlvNKTVTRKYVALVHGKIPHD-------------------------------------------------------------------------------------------------
>UniRef50_Q3AD19(78-246:301) Ribosomal large subunit pseudouridine synthase, RluA family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AD19_CARHZ  E=4e-23 s/c=0.65 id=22% cov=54%
---------------------------------------------------------------------EGFYPIYRLDRNTSGPMLIAKFSLIAEMLnnSLRKRQINKIYLALIEGPLADKSGI-----INLPLGLLEGSIIKRAVVPGGQPACTKYQTVKAFPTHTLLKVELLTGRTHQIRAHFAAIGHP---------------------------
>UniRef50_Q2W2D5(225-446:505) Pseudouridine synthase n=39 Tax=Bacteria RepID=Q2W2D5_MAGSA   E=4e-23 s/c=0.50 id=22% cov=52%
-------------------------------------------------------------------------IVHRIDKDTSGLLVAAKTDAAHRGLAtqFAAHTLERAYWALVWGTPSPRQGE-----IEGNIGRNPNDRKKMaVVKSGGKPALTRYRVLKsfAGGAVSLVECRLATGRTHQIRVHMTTQGHP---------------------------
>UniRef50_Q2CAH0(17-182:215) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=Q2CAH0_9RHOB   E=1e-22 s/c=0.65 id=24% cov=52%
----------------------------------------------------------------------------RLDRDTSGVMIFALTPHAQRHlgLQFEKRQTRKTYVARVAGRIADKTGTVDLPLIV--DWPNRPKQ--MVDHENGKPAVTDWRVVRASDAETRVRLFPKTGRSHQLRVHMLALGHPIL-------------------------
>UniRef50_C6XFD0(92-274:340) Pseudouridine synthase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFD0_LIBAP  E=1e-22 s/c=0.59 id=36% cov=21%
----------------------------------------------------------------------------RLDKDTTGVMVVAKNDLAHQKLSEQfvdhgkSTRLKRAYYAMVWGIPLPD-------------------------------------------------------------------------------------------------
>UniRef50_C8WWB4(61-261:303) Pseudouridine synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWB4_ALIAD  E=1e-22 s/c=0.54 id=24% cov=67%
----------------------------------------IVAVNKPVGVLTHPADGEYKTSlaaqveayVYDRGAREGAFraaPVHRLDRNTSGVVVFAKTarAAKAWADAFHRGEVEKEYLAIVEGEWSG------RGRVAVD--VRREGNVTRVVDDSGKPSETAYEVVASSRGTSLVRLHLLTGRTHQIRVHMAHLGHPLL-------------------------
>UniRef50_A7NB61(89-268:332) Pseudouridine synthase n=18 Tax=Francisella RepID=A7NB61_FRATF   E=1e-22 s/c=0.60 id=31% cov=21%
----------------------------------------------------------------------------RLDKDTSGLMVAAKSSIAYHNLVQQlaERKVSRKYLAIVEGEIYQQ-------------------------------------------------------------------------------------------------
>UniRef50_C8WX68(76-248:333) Pseudouridine synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX68_ALIAD  E=2e-22 s/c=0.62 id=21% cov=70%
----------------------------------------VIVVNKPAGMLTHPSPHERRGSLLaaaaHYLRDRGgvPHAVHRLDKYTSGAVLIAKHAHAHHQLDRALRQglVDRRYVAIVYAPEGCETGRWLTFVDGLAPNPHRPSRRIVVPPDRGDRAVTHALPLVQAGPLALVALVLETGRTHQIRAQMAFHGMP---------------------------
>UniRef50_Q1WS68(55-253:304) Pseudouridine synthase n=2 Tax=Lactobacillus salivarius RepID=Q1WS68_LACS1  E=2e-22 s/c=0.54 id=24% cov=67%
----------------------------------------LLVVNKPQGIKSHPNQPYETGTLVNYIAgyldarDEHPYMVHRLDMLTSGAMIVAKNPVVVPILTRliSTHTIKRDYLAITEGIFDQkEGVIDLPIGKDENDKRKRK-----VDGIGALPARTRYQVIKEFENNSVVYLRLETGRTHQLRVHLSAMGHP---------------------------
>UniRef50_A8IAL9(123-317:384) Pseudouridine synthase n=2 Tax=Xanthobacteraceae RepID=A8IAL9_AZOC5   E=5e-22 s/c=0.54 id=22% cov=69%
----------------------------------------VLVLNKPSGIAVQGGSGTFRHIdgMLDALrakDGQKPRLVHRIDKDTAGCLLIAKNRLSAAQLAknFRSREARKIYWALVPGVPKPRQGRISTY--LAREEAEERMRVARHGEEDASHAVTYYaVVEHAAQKMSWLSLKPVTGRTHQIRAHLAHIHHP---------------------------
>UniRef50_Q057H9(58-258:321) Pseudouridine synthase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057H9_BUCCC  E=6e-22 s/c=0.53 id=19% cov=68%
----------------------------------------ILIINKPTNFVVHLGYGNTSGTLLNALIfhypdnllIPRAGIVHRLDRNTTGILVVAKTISTYYFLinLFKKRKIIKEYDVIVIGRIEVDG--KIEKPIKRDIYN----RTKMTVGIGGKQAITYYSVITIFKNHTYLRIQLKTGRMHQIRVHLSSIFHPVL-------------------------
>UniRef50_UPI00016B2413(146-344:379) ribosomal large subunit pseudouridine synthase, RluD subfamily protein n=3 Tax=candidate division TM7 RepID=UPI00016B2413  E=6e-22 s/c=0.53 id=26% cov=36%
----------------------------------------IIVINKPAGMLTHAKGAIAEEfTAADIVKPitnykadtNRPGIIHRLDRNTSGVLLMVKNSDAASKIQKQfsQRTVKKTYYAIVCGIP----------------------------------------------------------------------------------------------------
>UniRef50_Q39Z12(2-185:270) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=Q39Z12_GEOMG   E=1e-21 s/c=0.57 id=20% cov=55%
-----------------------------------------------------------------------VYPVHRLDKPTSGVLLFALDPAFARGLvgAFASGSVTKTYLAVVRGTMPEEGVidhplaeepDRFEQGRGNAGERA-PQSAVTGYRRLADVELPVAVGRYPTSRYSLVSLSPRTGRRHQLRRHLKHLFHP---------------------------
>UniRef50_C0CMK8(80-254:310) Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMK8_9FIRM  E=1e-21 s/c=0.60 id=23% cov=58%
-----------------------------------------------------------------------VRIIGRLDKDTSGIVVAAKHKIAAQKLSWQRDRgiFGKEYLALVHGEFSDFDG-FLREPIARVQGHPLKMKVC----AQGKPAKTQYHVIAQNRGYALVSCRLYTGRTHQIRVHMQSIGHPLVNDVIYGLG-----------------
>UniRef50_C6JBH1(83-244:299) Pseudouridine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBH1_9FIRM  E=1e-21 s/c=0.65 id=23% cov=51%
----------------------------------------------------------------------------RLDRDTTGALILAKNPLSAAILsvQMKKRQILRTYLALVDGLLPDSG--TINAPIARMEGS---VITREVNFGTGESAITHYERLAAGKEYSLAELHLETGRTHQIRVHMKYIGHP---------------------------
>UniRef50_B8E0R4(42-258:303) Pseudouridine synthase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0R4_DICTD  E=1e-21 s/c=0.48 id=21% cov=51%
----------------------------------------------------------------------------RLDKDTTGLLIIAKNDLSHQKLSEQlkNRTLRRTYWALCEGEIPWEEKR-----IEAPIGRHPINRKKMAIVPYGKIAITNFKVLERFKGYTLISADLETGRTHQIRVHISHLGFP---------------------------
>UniRef50_Q5WF07(84-249:301) Pseudouridine synthase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF07_BACSK  E=3e-21 s/c=0.63 id=25% cov=53%
------------------------------------------------------------------------HAVNRLDRGTSGLLIVAKHRYAHDLLsrLQQQGGVKRCYKALVTGVLSEKAG-IINAPIDRKPG----SIIEREVGPGGKSAITHYKVEAESKTHSLVSLQLETGRTHQIRVHFAYIGHP---------------------------
>UniRef50_D1R6W7(78-246:295) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6W7_9CHLA  E=4e-21 s/c=0.61 id=20% cov=57%
--------------------------------------------------------------------DPSLKLVHRLDRDTTGILLFAKTDAVLHKMirLFKTFKVKKTYYVIVDGAISKEKGVIDNNLAPLHKYQGQTV-WGQATGSKGVHARTGWRKEKKGQDCTLIQCYPVTGITHQIRVHMSEMGHPIL-------------------------
>UniRef50_D0XS67(105-297:350) Pseudouridine synthase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XS67_9CAUL  E=7e-21 s/c=0.53 id=25% cov=53%
----------------------------------------------------------------------------RLDRDTSGVLLLGKGPEAAKRLagAFARRQAKKTYWAIVMGLPKPADGQIsvhLKKSGINDYEIMRPA--DPKDPGAEPAETAYAVISHAAQRASWMALRPFTGRTHQLRAHMKAIGHPIL-------------------------
>UniRef50_A9IIW7(104-271:324) Pseudouridine synthase n=5 Tax=Bordetella RepID=A9IIW7_BORPD   E=8e-21 s/c=0.61 id=26% cov=49%
----------------------------------------------------------------------------RLDKDTSGLMVVARNELAQTHLvrQLQARSMGREYialahgWLPVAGKVDRPIGRDAR----------VPVRMSVERPIAPKPAITHYAPLRRGrapdGPVTEVACRLETGRTHQIRVHLASLGHPLL-------------------------
>UniRef50_B1X0W4(76-263:304) Pseudouridine synthase n=2 Tax=Cyanothece RepID=B1X0W4_CYAA5   E=1e-20 s/c=0.54 id=18% cov=56%
-------------------------------------------------------------------PKEKVFPIHRLGRGTSGLMLMGKTAIARSHLTRQmrEHKMRKVYRTLI-GENNLPDYFNIEHPI---GKISDPVLGYIYGaKADGKDAYSQCQIIERYSDKTLVEVTILTGRPHQIRIHLATIGYPLL-------------------------
>UniRef50_A3VN52(94-274:324) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN52_9PROT  E=2e-20 s/c=0.56 id=22% cov=60%
----------------------------------------------------------------------------RLDRDTGGVLLLAKSRAVAATlsLAFQQHRIGKTYWAITKGVPHPLFGRI---DMRIEKAGEPGREKMRGTEQGQSALTDYQTVETAGQKAAFLALRPHTGRTHQIRVHLSAIGTPIVGDRKYGGAGAVLEGLP---------
>UniRef50_Q6MGX8(52-251:319) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGX8_BDEBA  E=2e-20 s/c=0.51 id=23% cov=69%
----------------------------------------LIVINKPAGLVVHPAAGHAHDTLVNALihhtddlsmkfGEERPGIVHRLDKETSGIIVIAKNDKAHESLTsqFKERSTHRIYYAVCLGTartlsgsvrsfLARHPVDRKRYASVLGDDR-KPLTDPNDDPGLGKWAVTHFEVLQRKSGMSYLKLKLETGRTHQIRVHMSESGLP---------------------------
>UniRef50_D2ELJ1(80-248:301) Pseudouridine synthase n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELJ1_PEDAC  E=2e-20 s/c=0.60 id=20% cov=54%
-----------------------------------------------------------------------VHVVTRLDQDTSGLVLFAKRRFAHTIMDQdlRQHRVQKYYLAMATGRFAQSHGLIDA---PIERDPASFIKRRVASAGNGKPSKTEYWVLEQTDTDSLLKVQLHTGRTHQIRVHFSELHHP---------------------------
>UniRef50_D0P480(118-298:363) Ribosomal large subunit pseudouridine synthase A, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P480_PHYIN  E=2e-20 s/c=0.56 id=31% cov=22%
----------------------------------------VIVVNKPANILSVdGTDPDALMSVHRCVARvyPNARMVHRLDQETSGLLV----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C9LQW6(46-243:305) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQW6_9FIRM  E=3e-20 s/c=0.51 id=21% cov=69%
----------------------------------------ILIADKKAGLLCMDSTGKTTRTLIgevnEYLADKGepsAYMVHRIDFNTSGLMVIAKDEESKGILdrMIKERELEKVYLCIVSGVPKKKEGHLIHY--LFKDSKQGKVFLSDVPQKGAKSAVTDYHIVKTGQNLSLLECTLLTGRTHQIRSQMAYIGHP---------------------------
>UniRef50_Q6MEC0(89-264:318) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEC0_PARUW  E=3e-20 s/c=0.57 id=24% cov=51%
----------------------------------------------------------------------------RLDKGTSGLLVAAKTLETQQKLieLFASRKVYKAYLAICIGRPADGEIQA-----PIGRHPIHRKQMAVI--PTGKPAISFCKTLGWSDKLSFVQIEIATGRTHQIRVHMKYRGSPIL-------------------------
>UniRef50_A8RDU5(74-264:317) Pseudouridine synthase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU5_9FIRM  E=3e-20 s/c=0.52 id=17% cov=66%
-----------------------------------------LIVYKPSFMLVHSDGNETETTLYDIVKGYYllqgldipVRAIHRLDKETSGAVIFCKIPLLQPLLdyMLQEKQIDRQYLALCAKVLNDDL--TIDKQIGRDRHNAKKMRIS----KQGKSAKTDVHVIAQYQDYTLIACKLYQGRTHQIRVHLASITHP---------------------------
>UniRef50_A8HZL1(85-253:319) Pseudouridine synthase n=12 Tax=Alphaproteobacteria RepID=A8HZL1_AZOC5  E=3e-20 s/c=0.59 id=24% cov=55%
--------------------------------------------------------------------------AHRLDKDTSGCLVLGRHGKALALLnrLFAEGQADKTYVAVTRGAPAEETGRIDQPLAKRSPHRGWWMQAVPKGTPGGLEAVTDWRVLARTEGLAVMALSPVTGRTHQLRAHLSHIGFPIL-------------------------
>UniRef50_B1H0R5(38-248:296) Pseudouridine synthase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0R5_UNCTG  E=4e-20 s/c=0.47 id=19% cov=53%
------------------------------------------------------------------------YLIHRLDKDTSGVIVFAKTEKAKISIskQLQKRVVKKIYYAAVKGVIAENRG-IIKAPL---GRSPKNRKLVSVNPLAKKVAITEFKVIERKDDYTLLKVRIITGRTHQIRSHMKYINHP---------------------------
>UniRef50_B0SG87(51-256:320) Pseudouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SG87_LEPBA  E=8e-20 s/c=0.48 id=21% cov=60%
------------------------------------------------------------KTLLSFLetKYPKIIPVHRLDRETSGIVIFAKSEESRKWLQkkFETRVVYKEYFAIVLGKFTKEQKLDGFIGRDIHSVIRKKMIFSPVEFPDSKSCATHfvPILYNEDKKISLVLVKPITGRIHQIRASLLYLGFP---------------------------
>UniRef50_C7TK72(80-238:278) Ribosomal large subunit 23S pseudouridine synthase D n=8 Tax=Lactobacillus RepID=C7TK72_LACRL  E=9e-20 s/c=0.62 id=24% cov=50%
----------------------------------------------------------------------------RLDMATSGLLVIAKNPLAQAIINRQltTKTMHRDYLAVVPSGIPEKGTIQAPIGHDPDDKR------KRMIRADGAFAVTHYHRIAETADTATIELNLETGRTHQIRVHLASIGFP---------------------------
>UniRef50_Q47XX3(117-269:318) RNA pseudouridine synthase family protein n=2 Tax=Gammaproteobacteria RepID=Q47XX3_COLP3  E=1e-19 s/c=0.65 id=21% cov=61%
--------------------------------------------YKPYGMLSQGSKWSDHCTIARFaqqnLPNERpAFIVHRLDRAATGLIIVAHSKSAARALshMFEHHQLEKHYQIIVHGD---------------HRKRAQPDIIDSDVDGKKARSTFTCLAYDEMTDQSLIKVKIDSGRKHQIRLHAASIAMP---------------------------
>UniRef50_C5DCE4(122-290:397) KLTH0B02376p n=2 Tax=Saccharomycetaceae RepID=C5DCE4_LACTC   E=1e-19 s/c=0.58 id=21% cov=55%
-----------------------------------------------------------------------VFPSHRLDKITSGVLILTKNPHMANKIQHQirQRTMSKIYLARVDGAFPMADTLGSLTPFESPDKTQTVDSAIYTvelkkqfpaafSPPREAKTKFYPLKYYPKSDETLVACQPITGRTHQIRIHLARLGHP---------------------------
>UniRef50_B0VJ94(60-260:351) Pseudouridine synthase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ94_9BACT  E=1e-19 s/c=0.49 id=29% cov=22%
-------------------------------------------------------------------------IVHRLDRGTSGLIIIAKNDLTHAKLsdMFARREIKKTYFAITTGIPEPE-------------------------------------------------------------------------------------------------
>UniRef50_Q28US1(79-278:354) Pseudouridine synthase n=43 Tax=Rhodobacterales RepID=Q28US1_JANSC   E=1e-19 s/c=0.49 id=23% cov=70%
----------------------------------------IIAINKPAGLPTQGGTGQSRHVdgLAEALKfglEDKPRLVHRLDKDTSGVLLMARTRMGAKALTdaFRLRSTRKIYWAAVAGSPLPRMGtiklglvKAPGHGRGGENEKMRAVPVDEIaqVDGAKRAETDYAVMSNLGGRVCWCALVPITGRTHQLRAHMAEIGHP---------------------------
>UniRef50_C4GB89(60-277:337) Pseudouridine synthase n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB89_9FIRM  E=2e-19 s/c=0.45 id=21% cov=54%
--------------------------------------------------------------------------ANRLDRNTSGLILAGKTLRGQQYLSEQlrDRSVIKLYHTIVRGRLTEELQLDGYLYKDVGRNQVLVSEKKEDLPEGAQEIHTAYRPLDHRKDLTLLEVHLMTGRSHQIRAHLASIGHP---------------------------
>UniRef50_UPI0001698CBA(5-119:145) hypothetical protein Epers_16024 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698CBA  E=2e-19 s/c=0.85 id=32% cov=52%
--------------------------------------------------------------------------------------LITDDGAWSHRILAPARKCSKRYLVTLAESLSERDAERLRQGILLcsEARPTKPVQLQLVSSNS-------------------CRLTITEDRYHQVKRMFAALGNRVVVLHRERIGALQLDpDLSPGNYRALTE
>UniRef50_Q6MJF7(2-198:230) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJF7_BDEBA  E=2e-19 s/c=0.50 id=24% cov=53%
-----------------------------------------------------------------------VYVVHRLDQATTGVLIFAKTEQVQHFLKDDWKSTIKTYYAIVHGKMPKKSGTITSYLEEDENYVVHSSK----DSDKGKLAITEYEVLKETEKFSLLKINLLTGKKNQIRVHLAGEGHP---------------------------
>UniRef50_Q03PR9(78-243:294) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03PR9_LACBA  E=2e-19 s/c=0.59 id=24% cov=51%
----------------------------------------------------------------------------RLDRFTSGVVWVARH-RLANSLAsqlQAAHQIDKRYLAVVSGRLEADH-AVIDAPLASD-----PTGYNQMVSPTGKPARTEYWVQQRFATATVVAVKLHTGRTHQIRAHFASLGHPLL-------------------------
>UniRef50_D1B0V0(38-236:302) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0V0_SULD5  E=3e-19 s/c=0.49 id=28% cov=21%
------------------------------------------VFDKPSGVMIHPRKRSDGYTLNDEIKSlygKDANAAHRIDKSTSGLVL----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B8BRE9(4-179:221) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRE9_THAPS  E=3e-19 s/c=0.56 id=32% cov=66%
-----------------------------------------------------------------------LHAIGRLDADTTGLLLLTNDGGLVHWITNPTSKqdsdpIPKTYEAVImghhylpqcDGPFTNNDNNTYPLMTLIQNGALLPQKYGGHTRPVDRLS----VLSHPTRSTTRVSITISEGKNRQIRRMFHAIGSGVMKLHRVSVGDLNLSGlmpleeriqretsdvardeLKEGEWRVLHE
>UniRef50_Q2G4F0(97-273:436) Pseudouridine synthase n=12 Tax=Alphaproteobacteria RepID=Q2G4F0_NOVAD  E=3e-19 s/c=0.55 id=21% cov=69%
-----------------------------------------IVLNKPPGLATQggsGTHEHVDGLLDAYVNEGEARPrlVHRLDKDTSGVLLIARTPGSAAFFSKRFscRSARKIYWALVVGVPDVKDG-LIELPLAKQPGTGGEKMMVDESGQGQSARSRYRVISRAGNAAAWVELQPLTGRTHQLRVHMAAIGHP---------------------------
>UniRef50_Q6MMV3(52-221:290) Pseudouridine synthase n=2 Tax=Bdellovibrio bacteriovorus RepID=Q6MMV3_BDEBA  E=5e-19 s/c=0.57 id=24% cov=55%
---------------------------------------------------------------------QHVYPVHRLDAGTSGVLLFALSSESASKLCrlFTERATHKTYQAVVRGFVKEEGEVQL--PLELD---STGDLVDAHTSFKRLATVEFPVAVGKkfpTARYSWVEVTPHTGRYHQIRRHFNRISHPLL-------------------------
>UniRef50_B8P9A9(92-269:448) Predicted protein (Fragment) n=3 Tax=Agaricomycotina RepID=B8P9A9_POSPM  E=5e-19 s/c=0.54 id=23% cov=53%
-----------------------------------------------------------------------VYTINRLDRLTSGLMIIPLSSSMANTLTqeFAAGTIRKEYIARCRGQFPEEELACEVPLLTIDRQMGL-----NVVHPEGKPAKTIFKRmhYDANTDTSVVHCEPLTGRSHQIRVHLQYLGHP---------------------------
>UniRef50_A6TAT3(52-230:263) Pseudouridine synthase n=57 Tax=Bacteria RepID=A6TAT3_KLEP7   E=1e-18 s/c=0.53 id=22% cov=55%
---------------------------------------------------------------------PGCTLVHRLDFGTSGLMVIARNKGINALLCQQfsQRTVDKVYTALLCGHLAEDEGIVEAA---IAKDPARFPRMALCARH-GKPARSRYRVIdrlyqaregERALALTRVTLTPETGRTHQLRIHCQLLGYPIL-------------------------
>UniRef50_UPI00006CD8DD(102-286:446) pseudouridine synthase, RluD subfamily protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD8DD  E=3e-18 s/c=0.51 id=20% cov=55%
----------------------------------------------------------------------ELYVLHRLDKLTSGVLIMAKDRDLTKKFHESETElIKKTYLARVHGNFNHQYLEY-EKPIYCIYKKVGTYAVldttdeEEIKSKGAKQSKTifKKIWYDEKSDSSLLECQPITGRTHQIRVHLSSLGFP---------------------------
>UniRef50_A1WTN6(1-180:249) Pseudouridine synthase n=2 Tax=Ectothiorhodospiraceae RepID=A1WTN6_HALHL  E=3e-18 s/c=0.52 id=24% cov=56%
-----------------------------------------------------------------------VYPVHRLDRATAGVLVFGLDPDAASVLaaAFREQRIGKRYQAVVRGWVEAPGRIDRPLGAGRRGEGGAPQPAVTDYVPLAWTELPIPVSRYDTARFTRLALHPQTGRQHQLRRHMKAISHPIL-------------------------
>UniRef50_A8VZ12(101-262:305) Pseudouridine synthase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZ12_9BACI  E=3e-18 s/c=0.58 id=16% cov=48%
------------------------------------------------------------------------HPVTRLDRQTSGLMLIAKDRHSHSLFMKQQCAglIDKEYVA-----VTPPGFPWIAATVDAPIARHPDSIIERMVHHEGQKAKTRLVKVNENASGSLIRCKLETGRTHQIR------------------------------------
>UniRef50_D0KW62(21-183:222) Pseudouridine synthase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KW62_HALNC  E=4e-18 s/c=0.58 id=19% cov=54%
---------------------------------------------------------------------PEARIVHRLDWDTSGVMVLARHARAHRALsiAFQDRRTKKCYIAHVDRAPAPPQG-LIDRPIGSDREHRPR---YRIDEEQGRPSQTRYVVLNETADFARLALEPITGRSHQLRVHLLSIGHP---------------------------
>UniRef50_Q49WD7(77-237:284) Pseudouridine synthase n=5 Tax=Staphylococcaceae RepID=Q49WD7_STAS1   E=5e-18 s/c=0.58 id=19% cov=51%
------------------------------------------------------------------------HIVTRLDRNTSGIVILAKHGFIHHLMSN--LNIDKKYLCICYGKTEKEGV------IDAPIARHPESIIQRRVDAAGKTAQTRFKRVEYKEGFSMCEVTLLTGRTHQIRVHFQHIGH----------------------------
>UniRef50_D1N7N8(85-274:323) Pseudouridine synthase, RluA family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7N8_9BACT  E=5e-18 s/c=0.49 id=24% cov=53%
----------------------------------------------------------------------------RLDKDTSGCLAVAKTANAQFKLstAFAGRETRKTYLAITRGVPIRRSGELST---LIGRHPVSRQKMAVVERNGKLAITRYRVEYTgmlDGVEIGVLAVRILTGRTHQIRVHLASLGVPVL-------------------------
>UniRef50_P75485(62-243:309) Uncharacterized RNA pseudouridine synthase MG209 homolog n=2 Tax=Mycoplasma RepID=Y292_MYCPN  E=6e-18 s/c=0.51 id=28% cov=24%
---------------------------------------QIMVVNKPNGLISHPTSFNESESLLGaalfHCNHQPVFLVHRLDRDTSGVIMLAKN------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A6GHA7(92-261:324) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHA7_9DELT  E=7e-18 s/c=0.55 id=23% cov=51%
----------------------------------------------------------------------------RLDKDTSGLIVFARGLRAQTVLAeqFRDHSIDRAYLGVVLGRPSFE-----RRRLETTHGRDPADRRRFAPDQGTRRAVTTMEVLRPlGAHAALARFTLETGRTHQIRMHARMVGHP---------------------------
>UniRef50_Q9LT72(156-376:477) RNA pseudourine synthase 4, mitochondrial n=2 Tax=rosids RepID=PUS4_ARATH  E=7e-18 s/c=0.42 id=31% cov=43%
----------------------------------------IIVLNKPHGLAVQG--GSGIKTSIDelaasclkFDKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREkttgasaygvkknvksLKRKYMALVIGCPPRQRGQIsapLRK-VVVDDGKS---------------------------------------------------------------------------------
>UniRef50_A6QCU7(39-236:309) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QCU7_SULNB  E=8e-18 s/c=0.47 id=19% cov=69%
-----------------------------------------MIFEKPSGVLVHPNTMSTPYSMLDeirHISGDNANATHRIDMETSGLLLASKHKKAETHLknSFEAKTIKKSYLAWVDGRLNEPF--SVSEKIKINNDYSRVKHKVFISDAGKASHTDFiPLRYNERLDATLVACYPQTGRTHQIRVHLFHVKHPIL-------------------------
>UniRef50_C7LWX3(58-256:306) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWX3_DESBD  E=1e-17 s/c=0.46 id=22% cov=52%
-------------------------------------------------------------------------PVHRLDRDTSGLLLCAKTHDFLRAMHASWPTLTKGYLCWVEGAWAAAGWRT----VVSELAKAQTGSGEQVVSGQGKRAVSHVHPVLVTAGKSLLLVVLGTGRTHQIRVHLADCGH----------------------------
>UniRef50_C4Z1D5(4-190:225) Pseudouridine synthase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z1D5_EUBE2  E=1e-17 s/c=0.49 id=25% cov=58%
----------------------------------------------------------------------------RLDRPVSGLVLIAKNKSAAAKystLMQKEGGFNKQYEALICGKLSESKG-TFVDYLKKDGRTntsaIVPADAAANDKEAKLSKlEYEVISYDEVKDITHVRIHLITGRHHQIRVQFASRRHPLVGDYKYATAD----------------
>UniRef50_C8PZW5(3-210:266) Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZW5_9GAMM  E=2e-17 s/c=0.44 id=24% cov=55%
-----------------------------------------------------------------------VYPIHRLDRPTSGVLLFALSSESARQLCEQfeNRQVQKSYLAIVRGYLTvnaqtsgliDYPLTQILDKIgdkpslqalqqrkvsstdMFAEALSSPAELTLLQPAQTHWQClatteqpFQARARYPTSRFSLARLTPITGRKHQLRRHMKHVFHP---------------------------
>UniRef50_A6GAA8(50-261:311) Pseudouridine synthase, RluA family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAA8_9DELT  E=2e-17 s/c=0.43 id=25% cov=56%
---------------------------------------------------------------------PYVGVVHRLDQGASGLVLFTIRDVANKSLhkQFRDHEIRRGYRVRVTGEPPA-QLRCDAPLIKLRsGGVKVGSPGDGRSKPATTHFRHVARVDGEAGPEHLLDVEIETGRTHQIRAHAAHLGFP---------------------------
>UniRef50_B0ME87(61-269:329) Pseudouridine synthase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0ME87_9FIRM  E=5e-17 s/c=0.43 id=23% cov=70%
------------------------------------QDSNVLIINKPYGMLSQKAKPSDI-SVNELIvpyclehgilkesDLELVRPsvCNRLDRNTTGLLIAGISLEGLQTMAEvlRDRSVRKYYYCIVKGMVNKKTR---ISGYICKDHRENKVSFSERKISGGSRIETAYEPMAAGHGFTLLRVELITGKTHQIRAHLAGMGFP---------------------------
>UniRef50_Q1D114(53-248:306) Pseudouridine synthase, RluA family n=6 Tax=Cystobacterineae RepID=Q1D114_MYXXD  E=7e-17 s/c=0.46 id=29% cov=52%
----------------------------------------------------------------------------RLDRETSGCLAFARTDTAAAALLrsFQEKRVDKRYWTLVLGQPPAQG--RLEGPYARD--PADPRRFTTRVPSARRAALSFEVRERFA-DAALLEVDLDTGRTHQVRVQLSEAGFPVL-------------------------
>UniRef50_B7PYG1(165-380:443) Ribosomal pseudouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PYG1_IXOSC  E=1e-16 s/c=0.41 id=27% cov=36%
----------------------------------------ILVLNKPYGMLCHGPAPGVsdacvlTKLLPDLssalypRQDAKLYTVHRLDRDVTGVLLLARTQRMADMLnsLFQKHQVSKTYLAITAGVPD---------------------------------------------------------------------------------------------------
>UniRef50_B7G0Q3(6-170:200) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0Q3_PHATR  E=1e-16 s/c=0.54 id=19% cov=56%
-----------------------------------------------------------------------VFPVHRLDHRTSGALLFAFDSEMCASLHDalREQSARKTYVCLVRGFWDnffESDTATVDKALTVDGTKRSATTVFTKLASTIILNNSAYGEKNVPISCSLILAVPTTGRTHQIRRHASAMGMPVL-------------------------
>UniRef50_Q5QZ45(87-287:315) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q5QZ45_IDILO  E=3e-16 s/c=0.43 id=23% cov=51%
----------------------------------------------------------------------------RIDRDTSGLLLVAKKRSVLRSLHEQlrNKEMNKQYLALVRGQW-QKRVRSVEAPLK---KNTLKSGERIVrVDAEGKASLTRFRIQQRYKEGTLVEASPVTGRTHQIRVHALHAGHP---------------------------
>UniRef50_C8X5P4(94-271:299) Pseudouridine synthase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5P4_DESRD  E=5e-16 s/c=0.49 id=20% cov=53%
-------------------------------------------------------------------------PVHRLDKDTSGIILVAKRADVFQIIQQawQRGEVQKDYLAWLApGDDVGPGWHTWRD--RIEICHTDRGEKMCCTEGGKEAILHLRPLRRNSLGEILVAIQLETGRKHQIRVQSANRGLP---------------------------
>UniRef50_A4E9L1(1-167:205) Pseudouridine synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9L1_9ACTN  E=9e-16 s/c=0.51 id=19% cov=54%
-------------------------------------------------------------------------PLNRLDRNTTGVVLFSLDKQTQpaFDQMVNDHAFEKHYLALAEGKIDWNE-KLIDKPIARDRHDSRKMRVGASGKPSQTRVKVLKRlKSRRGLPTrSYIDVELLTGRKHQIRVHLASEHHP---------------------------
>UniRef50_D1BN73(81-278:324) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BN73_VEIPT   E=1e-15 s/c=0.43 id=24% cov=21%
----------------------------------------------------------------------DFHPVHRLDKDTSGIVIIAKTSVVQHAFDKKHTHFYKSYDAIVEG------------------------------------------------------------------------------------------------------
>UniRef50_C5L1W3(43-221:322) Ribosomal large subunit pseudouridine synthase b, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5L1W3_9ALVE  E=2e-15 s/c=0.47 id=29% cov=42%
------------------------------RDQPVEPPgdPKVWLINKPRGVVCSATRIRGLTTLPDLFEIWHKRRANELSHNinnvdlipphfivinpipvmCSGLVILTNDGEFAHNMAHPRSKVLSVFLVRVKGRLPED-------------------------------------------------------------------------------------------------
>UniRef50_C7NC29(66-285:314) Pseudouridine synthase n=2 Tax=Leptotrichia RepID=C7NC29_LEPBD   E=3e-15 s/c=0.38 id=20% cov=86%
----LFSENFDNKKSFEKNNLKKIQIQKSDlekyKKMIIFENEDFFIVNKSEKIPMHKGTGHKYGLAevfKEIFKNENINFANRLDFETSGLVIGCKNLKFLRYISQkiRDNEIQKKYFAIVHNIknnieskifkienyltTTENKVIVSENPISKDSKKSITNFKKILISELKNTKKILDLLEKNNKNVFLLDVDLVTGRKHQIRAQLAHQKIP---------------------------
>UniRef50_A6VWM4(3-165:223) Pseudouridine synthase n=2 Tax=Marinomonas RepID=A6VWM4_MARMS   E=4e-15 s/c=0.51 id=29% cov=24%
------------------------------------------------------------QTLAISYPDQNFYPVHRLDKMTSGLLIVACHAAAAAEFgkMFERHEMEKRYLA----------------------------------------------------------------------------------------------------------
>UniRef50_B9L6B7(48-214:253) Pseudouridine synthase n=1 Tax=Nautilia profundicola AmH RepID=B9L6B7_NAUPA  E=1e-14 s/c=0.49 id=20% cov=52%
----------------------------------------------------------------------------RLDKETSGVLILVKNDEFKKKAIeeFKKQNVYKEYITWVSGIVAEP----MKIDLPIKVIKTKSGALAKIS-KDGEDAVTEIEPILAFRTKSKVKAVIHTGRTHQIRAHLKAVEHPIL-------------------------
>UniRef50_D1AVV4(74-239:289) Pseudouridine synthase, RluA family n=2 Tax=Fusobacteriaceae RepID=D1AVV4_STRM9  E=1e-14 s/c=0.49 id=21% cov=51%
----------------------------------------------------------------------------RLDMNTSGLIMIAKNSFSQSFIQSGKANVTKKYLA-----LAENMFEKEEIIVEEKIYKDGDELARIIDDRGQYAKTKFKlIKNYPHLDISLIECELFTGRTHQIRVHLKHLGHP---------------------------
>UniRef50_Q69K07(147-368:448) RNA pseudourine synthase 4, mitochondrial n=5 Tax=Poaceae RepID=PUS4_ORYSJ  E=9e-14 s/c=0.36 id=27% cov=45%
----------------------------------------IIVVNKPPGMPVQGgvgikNSIDVLASMFEENSSEAPRLVHRLDRDCSGILVLGRNQLSTSMLHAIFREktadaladgtqhvLQRKYVALVIGTPrhPKGLLSAPLAKILLQDGKS---------------------------------------------------------------------------------
>UniRef50_UPI0001903DB3(23-192:303) RNA-pseudouridine synthase protein, ribosomal large subunit C n=1 Tax=Rhizobium etli 8C-3 RepID=UPI0001903DB3  E=6e-13 s/c=0.45 id=32% cov=36%
---------------------------------------KVIVLNKPPGIAVQGGSGVARHIdqmLEAWTSPKGEKPrlVHRLDRDTSGVLVIARTRGAAQKLTaaFRERDTKKTYWALVKGVP----------------------------------------------------------------------------------------------------
>UniRef50_A1VAY5(163-343:400) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1VAY5_DESVV  E=9e-13 s/c=0.42 id=26% cov=54%
----------------------------------------------------------------------------RLDGPTSGILMLAGDtaGERQWRKAEDEGGTRKTYLAVCTGRLErgtvvRAALDTARRTVTRVrpcdtDDRLRHTEVVPLAHFRLGDLANPITDDSAGVPAcdetvTLVCCRIRKGARHQIRAHMAHIGHPLL-------------------------
>UniRef50_Q013B9(144-364:472) Pseudouridine synthase, RluD (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013B9_OSTTA  E=1e-12 s/c=0.34 id=21% cov=55%
------------------------------------------------------------------------YIVHRLDMDTSGVAVFVKKQSLVSDVARQFHEktARKTYLAISVGVTPPGCGDGFvvdapigDHGVVKEarnvdfsgEGKEARTVCEVISRketalfdisdetvaatttPKGVSATSETNDSSPSATAALVLVKPMTGRTHQIRVHLAHAGLP---------------------------
>UniRef50_B0D7R4(4-213:321) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7R4_LACBS  E=7e-11 s/c=0.33 id=20% cov=49%
------------------------------------------------------------------------YPVHRLDKSTTGAFLLALTESSARQLsqQFQKRTVQKTYLALVRGgekSFPEKFGEIRTTLNKVDGYP----EVDLSSQGQPCATDWKLLASSPIAPISLLELNLLTGYKHQLR------------------------------------
>UniRef50_Q47Y03(23-244:304) Pseudouridine synthase n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y03_COLP3  E=1e-10 s/c=0.31 id=25% cov=55%
-----------------------------------------------------------------------VYPVHRLDRPTSGVLLFALTKDVATKLSEAfankssqaefksdtelEGKVHdktqtgqqgqqsmteglttdknidgsdlamvKTYYALARGHLAvpvdlidhplKEKLDKLGDKNVSRDKPAQSAQSYYQVKQQASLPI--KVGKFDSVRYSLIEVRPITGRRHQIRRHLAHLRHPIL-------------------------
>UniRef50_C8NY78(75-277:339) Pseudouridine synthase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NY78_9CORY  E=7e-10 s/c=0.33 id=27% cov=27%
-------------------------------RRPAPEPRVpfevtvvyeddaIMVVNKPPFLATMPRASHITESatvrLRRSTGNEELTPAHRLDRMTSGLLLFT--------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C3JBT0(93-255:330) Ribosomal large subunit pseudouridine synthase family protein n=2 Tax=Bacteria RepID=C3JBT0_9PORP  E=9e-10 s/c=0.41 id=24% cov=21%
----------------------------------------------------------------------------RLDRDTRGLILFARDREVQQEILdnWEKYILSQTFSALVEGVVPEE-------------------------------------------------------------------------------------------------
>UniRef50_C9N1D6(58-299:328) Pseudouridine synthase n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N1D6_9FUSO  E=2e-07 s/c=0.24 id=22% cov=52%
--------------------------------------------------------------------------ANRLDFETSGLVIGCKTLKFLRYISQkiRDNEVHKKYFAVVHNKniIRRNKLEREKfnlEDFKIENYLTTLENKVIVSENPVSRESKKSITYFKHVNFNklkkskeilklfeknnknilLLDVELITGRKHQIRAQLAH-------------------------------
>UniRef50_A8JEI5(37-172:235) Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8JEI5_CHLRE  E=9e-07 s/c=0.41 id=30% cov=23%
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------LRIVVAEGKKHEVRELVKAAGMNLLSLRRVRIGGFRLPrDLGLGGFKALT-
>UniRef50_Q87QY8(28-236:238) Ribosomal large subunit pseudouridine synthase E n=244 Tax=Bacteria RepID=RLUE_VIBPA  E=2e-50 s/c=0.96 id=57% cov=95%
--------NRVEDQTTRRHPTRTAKAKAKAKAnkpRVDLQNRKVIIFNKPYDTLSQFTDGDGRKTLADYIPVKDVYAAGRLDRDSEGLMVLTNDGILQAKLTQPKSKSPKTYWVQVDGAPQEQDLEKLRKGVELKDGMTLPAKVEVIDAPT-IWERNPPVRFRANIPTTWLAITIIEGRNRQVRRMTAHIGFPTLRLVRYSMGDITLGDLQPGQWKEI--
>UniRef50_Q1QUR9(55-236:257) Ribosomal large subunit pseudouridine synthase E n=26 Tax=Bacteria RepID=Q1QUR9_CHRSD  E=2e-49 s/c=1.08 id=57% cov=84%
---------------------------------PRPPMSSLYLLHKPYQMLSQFTDTRGRATLAEAIDVPDIYPAGRLDYDSEGLLLLTGDGALAHRISHPRHKQPKTYWVQVEGEPEPAALQALRQGVTLRDGPTRPAKVRRLESPD-VAPRHPPVRHREAVPTAWLELTLSEGRNRQVRRMTAHVGHPTLRLIRVAIGSWHLAGLAPGEWRRET-
>UniRef50_Q1GHH2(3-183:221) Pseudouridine synthase n=12 Tax=Bacteria RepID=Q1GHH2_SILST   E=1e-47 s/c=1.06 id=63% cov=82%
---------------------------------------RLIRFNKPFDVLPQFTDrgseGSPRATLSDYVDCPGVYPAGRLDRDSEGLMLLTDNGRLQAWISDPKHKLEKTYWVQVEGIPTEDALKALRQGVDLKDGMTRPAKAELISEPAQLWARTPPIRERKSVPTAWLELKISEGKNRQVRRMTAAMGYPTLRLIRYAIGAWTLDGLAQGKWDDL--
>UniRef50_P72581(36-234:261) Uncharacterized RNA pseudouridine synthase slr0612 n=16 Tax=Bacteria RepID=Y612_SYNY3  E=1e-47 s/c=0.96 id=57% cov=83%
-----------------------------------NKTPQTIVFYKPYGVLCQFTDNsaHPRPTLKDYINLPDLYPVGRLDQDSEGLLLLTSNGKLQHRLAHREFAHQRTYFAQVEGSPTDEDLEPLRRGITFADYPTRPAIAKIITEPD-FPPRNPPIRYRASIPTSWLSITLTEGRNRQVRRMTAAVGFPTLRLVRVQIqvtGRspqqgkgksaatwcLTLEGLSPGQWRPLT-
>UniRef50_A4BDP6(3-179:228) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BDP6_9GAMM  E=2e-47 s/c=1.07 id=59% cov=82%
---------------------------------------RYLLFNKPFQVLTQFTDPDNRQTLADFIDVPEVYSAGRLDYDSEGLLLLTDDGALIHSMMNPRFKTPKTYLAQVEGDITDEAIRRLESGLQLKDGPTLPAKARRVSEPAWLWPRQPPIRERATIPASWVELTLVEGRNRQVRRMTAAVGFPTLRLIRVALAELTVESLSVGQYKEV--
>UniRef50_C2D7I2(43-271:285) Pseudouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7I2_9ACTN  E=2e-45 s/c=0.80 id=31% cov=83%
--------------------------------------HVYLLLNKPSQVLTTMSDPFGFPCVASLVPcddYPGLFPVGRLDSDTTGVLLFTTNGNMGNRLLHPSHHVWKTYVALIEGKLTSSQMQKLSQGIMLEDGMTSPCFIRTITQDEPCTHldknHSLFDDMRLNAASSLCELKIHEGRNHQVKRMLQEIGHPVIKLHRFQFGPLCLNaQIPLGSWRMCTQ
>UniRef50_B0TFD8(34-230:333) Pseudouridine synthase n=18 Tax=Bacteria RepID=B0TFD8_HELMI   E=7e-45 s/c=0.92 id=41% cov=75%
----------------------------------------YYALYKPRGVVTTCKDPQGRQTVIGLLSgvNERVYPVGRLDRDTEGLLLLTNDGQLAFRLTHPRFGVEKTYRARLRGDVSAGALKALAEGVQLEDGVTAPAQVRLL---------------RREGDATWIEIKIHEGRKRQIRRMGDAIGHPVIDLERIAFGPITLGKLKPGEVRPLT-
>UniRef50_B3E7C4(28-227:274) Pseudouridine synthase n=6 Tax=Desulfuromonadales RepID=B3E7C4_GEOLS  E=1e-44 s/c=0.91 id=38% cov=75%
----------------------------------------YVLLHKPAGYVTSLKDPQGRQLVTELVKDvgERLFPVGRLDYNSEGLLLLTNDGAWANRLMHPRHQVDKEYHVRVRGKIDPQQIKKLADGVELEDGPTG---------------ATTVRLLKNDQSNDWLSVTIREGRNRQVRRMCAAVGLFVVRLRRIRYGNLTLGGLQPGEYRLLS-
>UniRef50_A3CPQ5(40-226:242) Pseudouridine synthase n=3 Tax=Firmicutes RepID=A3CPQ5_STRSV   E=6e-43 s/c=0.94 id=32% cov=78%
-----------------------------------NEEKVYYLLNKPRGVISSVSDDKGRKTVVELLPqvKERIYPVGRLDWDTSGILILTNDGDFTDEMIHPRNEIDKVYVARVKGLANKEVLRPLTRGIEIEGRKTKP-------------AVYEIIKVDPAKNRSVVQLTIHEGRNHQVKKMFQAVGLQVDKLSRTRFGHLDLTGLKPGEYRKLSK
>UniRef50_Q65HX7(29-226:244) Pseudouridine synthase n=5 Tax=Firmicutes RepID=Q65HX7_BACLD   E=2e-42 s/c=0.88 id=38% cov=90%
---------TVNGKTVRELGVKVSSSDRIEVNgvQLESEEPVYFLLYKPRGVISAVKDDKGRKVVTDFFTevEERIYPIGRLDYDTSGLLLLTNDGDFANKLMHPKYEINKTYVAKLKGIPLKENLKKLERGVRLEDGKTAPAKVKLLS-------------LDKKKQTSIVQITIHEGRNRQVRRMFEAIGHEVLKLKREEYAFLNLAGLKTGEKRELT-
>UniRef50_C0FY58(49-250:261) Pseudouridine synthase n=3 Tax=Clostridiales RepID=C0FY58_9FIRM   E=4e-42 s/c=0.86 id=37% cov=74%
----------------------------------------YYLFYKPAGCVTATED-QLHKTVMDYLTDtvrSDLFPVGRLDIDTEGLLLITNDGALAHDLLSPAKHVEKTYYAVIDGVVTEKDVNSFENGVDIgEEKLTKPGKLRIL----------------KSEPESEIELTITEGRFHQVKRMFEAVGKKVLYLKRISMGPLQLtDDLKPGEYRPLTE
>UniRef50_Q24V73(55-244:257) Pseudouridine synthase n=3 Tax=Bacteria RepID=Q24V73_DESHY   E=5e-42 s/c=0.91 id=42% cov=76%
----------------------------------------YYLLHKPTGYITSVTDPQGRKTVMELMPkiPRRVYPVGRLDYDTSGLLLLTNDGDLAHRLMHPSYGVEKTYRVEVGEKIPEQALKRLEKGVLLEDGKTAPARIREVSPKGRGSLPTY-------------EITIHEGRNRQVRRMFKAVGFPLSTLKRLRFGPLELDpSLAPGAFRTLSK
>UniRef50_B5YJH7(45-227:237) Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJH7_THEYD  E=6e-42 s/c=0.94 id=40% cov=77%
-----------------------------------PEPKVYYAFYKPRKVITALLDPQGRPTIRDFIKgiKFRIYPVGRLDFDSEGLLLLTNDGELAYKVMHPSSQIEKTYMVKVDGIVEPETIEKLRKGIKIEGKLAVPVSVHLV---------------KKLKANSWIKITLHEGRKRQIRKMLERVGHPVIRLIRIAIDGVKLGDLKPGQLRPLTK
>UniRef50_A8SYF2(22-228:239) Pseudouridine synthase n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SYF2_9FIRM  E=3e-41 s/c=0.82 id=33% cov=76%
---------------------------------------RYFLLNKPAGCVSATKDN-VHQTVIDLLNGEntkDLFPVGRLDLDTEGLLIITNDGRLAHHLLSPAHHIAKTYYADIDGYVDDQTISLFKQGIDIgDDTPTLPASLKIIEAD-------------RSTGSSRIELTITEGRFHQVKRMFQAVNMSVTFLKRISMGNLHIaDDLPTGSYRELT-
>UniRef50_C6Y027(274-461:472) Pseudouridine synthase n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y027_PEDHD  E=1e-40 s/c=0.89 id=31% cov=75%
----------------------------------------YVLLNKPKDYITTTDDPQERRTVMQLVEKasrERIYPVGRLDRNTTGLLLMTNDGDLADKLSHPKNGITKIYHVELSRSLSQGDLNKIQFGLELEDGIIKPDSVSYVTGGSKRE----------------VGIQIHSGKNRIVRRIFEHLGYDVVKLDRVVYGNLTKKDLPRGRWRYLEE
>UniRef50_A1ZI67(198-381:391) Pseudouridine synthase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZI67_9SPHI  E=1e-40 s/c=0.91 id=29% cov=74%
----------------------------------------YVLLNKPKDFITTTNDPQDRKTVMDLIKnscDERIYPVGRLDRNTTGLLLFTNDGEVAKKLSHPSHDVKKVYQVELDKPLKDEDLDSIAEGVILEDGYAAVDEIAILNPER-----------------TLVGVEIHIGRNRIVRRIFNHLDYEVVKLDRTMYAGLNKKNIDRGDWRYLSE
>UniRef50_C1F236(69-256:406) Pseudouridine synthase n=8 Tax=Bacteria RepID=C1F236_ACIC5   E=2e-40 s/c=0.89 id=36% cov=79%
-----------------------------------PEKLRYFMLNKPKGYVTTVSDPEGRHTVMEFFhgrgkGGERLYPVGRLDYASEGLLLMTNDGALANTLTKASSHVEKVYLVKVSGRPTEEQLEQIRAGIMIDRG--RPGEGRVMTAPAG-------VRMVRDAENPWFELTLIEGRNREIRKMFEETGHFVEKIRRIGYGPLVL-DVEPGEVREL--
>UniRef50_Q2K4S3(119-295:312) Pseudouridine synthase n=10 Tax=Rhizobiaceae RepID=Q2K4S3_RHIEC   E=2e-40 s/c=0.94 id=32% cov=75%
----------------------------------------YLMLNKPRGLVTTRQDPEGRPTVYDCLknfDIPHLSPVGRLDKASEGLLLFTNDTEFAQTLLDPLTHVTKTYHVQIDRLMDDEEIAAMTSGIRHDGELLTAAATRRL---------------RQGDRNSWIEVELDEGRNRQIRRMLEALGAECLRLVRVAIGGLELGELPKGAVRALTE
>UniRef50_A3ZQL4(66-238:517) Pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQL4_9PLAN  E=3e-40 s/c=0.97 id=40% cov=74%
----------------------------------------YYMLNKPPGVLSTNFDPAGRTRVIDMVPQDvRLFTIGRLDRASEGLIVVTNDGELANRLAHPRYEIEKTYRVEVAGHPEPDAITFVRRGVHLAEGFVQPVSVVM---------------KRKNKQSTTLEVILDEGKNREIRRLMAKIGHKVLRLKRIAMGPLRLGEMPEGAFREL--
>UniRef50_Q6FCZ3(2-179:264) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q6FCZ3_ACIAD  E=5e-40 s/c=0.93 id=56% cov=82%
---------------------------------------KIVVFNKPYDVLSQFREDSAHLTVSSFIADPELRIAGRLDLDSEGLMFLTDHGGLNQYITHPSNKKYKTYLVQVDGDITEDALEKLRKGVELADGLTLPAQATKVEEPEWLWERNPPVRFRASIPTSWVEISICEGRNRQVRRMTATVGFPTLRLIRTQIGSINLVklGLQPGEQKEI--
>UniRef50_Q01Z61(51-237:264) Pseudouridine synthase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Z61_SOLUE  E=6e-40 s/c=0.89 id=36% cov=85%
-----------------DHWVDPDHDKVTLEGKPLKAATKsYILLYKPKGYLTTYRDPEGRPTVYALLGDvgKWLSPVGRLDLDTSGLLVLTNDNDFAERITNPEHKVPKTYQIKAATVLSDEQIERLRAGVELSDGPTRPAEVKRL---------------RDGPKHTFLEMTITEGRNRQVRRMLEAVESKVSKLVRTAIGPVRIGELPIGKWRNLT-
>UniRef50_D0BMY5(18-226:237) Pseudouridine synthase n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BMY5_9LACT  E=6e-40 s/c=0.79 id=30% cov=92%
MKKLISSGEVLIDSTPATHVSNNVDPQiqviTVQGSRMEDNSQKYYLLNKPKGVITATTDSQ-LPTVIDLFKnenIEGLYPIGRLDRDTEGLLIITNNGPLGYRLLNPIQHIEKEYYVEVNGPLDNSCIQRFYDGIMFHDGtICKPAKLSILESSPSFSKAT---------------VTISEGKFHQIKKMFLCVGVKVTFLKRIRFGEFLLDEsLSPGEYRPL--
>UniRef50_B1XJP9(60-232:259) Pseudouridine synthase n=3 Tax=Chroococcales RepID=B1XJP9_SYNP2   E=9e-40 s/c=0.95 id=36% cov=76%
--------------------------------------HYYYLIHKPKGVVSTCADPKGRSTVLDLLPPPlrqgkGIHPIGRLDAQSTGALLLTNDGNFTLALTHPRYHIPKTYRVWLKGKVPEHVLDQWRQGVMLGDRRTLPTQIHLKT---------------ITQDKTCIDIMLTEGRNRQIRRVAEQLGFPVVKLHRLAIGNLHLGDLQRGQARPLTK
>UniRef50_Q01SF5(45-228:249) Pseudouridine synthase n=3 Tax=Bacteria RepID=Q01SF5_SOLUE   E=2e-39 s/c=0.89 id=35% cov=78%
---------------------------------KAPKHQIYIALNKPKGTVTTVHDPEGRETVMDLLHrvKERVYPVGRLDYHSEGLLLLTNDGELANSIMSAATHLEKTYVVKVTGTLTAEQEEKFRTGVPLSGRRTLPAGLKLLSRAE----------------NPWYEVKLTEGRNNQIRMMFRHFGKLVEKLKRVRIGPIELGTLKTGAFRYLDE
>UniRef50_C2MA52(245-428:472) Pseudouridine synthase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MA52_9PORP  E=3e-39 s/c=0.89 id=32% cov=74%
----------------------------------------YVLLNKPKNCVTTLTDPEGRRTVMDLVHnacTERIYPIGRLDRNTTGILLLTNDGDLAVRLMHPAFRKKKIYEVALDKEVTVEHMQMIAHGFELEDGEIHADAISYITGQTHDK----------------VGIEIHSGRNRIVRRIFEHLGYRVVHLDRVYYAGLTKKDLPRGRWRYLT-
>UniRef50_A6C4P7(72-247:352) Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4P7_9PLAN  E=6e-39 s/c=0.92 id=38% cov=77%
------------------------------------QPRRYYLLNKPSGFLCTNNDPAGRRRVVDLFPNDgqRLFTVGRLDENSEGLILVTNDGELAQRLAHPRYRVARTYHVQVVGNPPREKLDELRKGVRFKEGVFRVSGLKYL---------------KKQGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFGPLNLGKLKTGESRRLSD
>UniRef50_Q14P18(54-227:267) Pseudouridine synthase n=2 Tax=Mollicutes RepID=Q14P18_SPICI   E=7e-39 s/c=0.93 id=29% cov=78%
----------------------------------ENSNKIYLMLNKRRNCVSTMYDPQHRKTVLTYVKgiSERIYPVGRLDYDTSGLLLLTNDGEFTNIITHPSHIINKTYHVLLSGYLSKQQLQQLATGIEIEPGIIR------------SQAQAKLVKYEEVKNVSILLLTIHEVTKHQVKKMIQSLGHEVIKLKRIAIGFLQLDEtLKPGEWRYL--
>UniRef50_Q1LLR3(285-462:631) Pseudouridine synthase n=15 Tax=Proteobacteria RepID=Q1LLR3_RALME   E=2e-37 s/c=0.88 id=34% cov=78%
-------------------------------RKVTTKPPRVLLYHKPSGEIVSQSDPEGRPTVFDSLPRiknGKWVAVGRLDFNTEGLLIFTTSGDIANRFMHPRYGVEREYAVRTLGELAEADRQRLLHGIQLDDGEANFLRIADGGGEGV---------------NQWYHVALTEGRNREVRRMFEAVGLTVSRLIRTRYGQFLLPrGLKRGRWQEL--
>UniRef50_Q8X4Q8(51-233:290) Ribosomal large subunit pseudouridine synthase B n=117 Tax=Bacteria RepID=RLUB_ECO57  E=4e-37 s/c=0.85 id=36% cov=78%
-------------------------------RESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKlrgARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGI---------------NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLpKGLPRGGWTEL--
>UniRef50_A1U6Q2(38-222:231) Pseudouridine synthase n=4 Tax=Gammaproteobacteria RepID=A1U6Q2_MARAV  E=5e-37 s/c=0.84 id=37% cov=72%
----------------------------------------YLMMHKPAGVLSATTDSSQ-PTALDLLPRglaSRVHIAGRLDKDTTGLLLLTSDGQWSHAVTSPRRECRKSYRVWLAEAIPEQACRALEKGVMLNGETteTRPAEVRVH-------------------NNQLIDLTIGEGRYHQVKRMLAAVGNRVEALHRFRIGSIELDDkLAPGEFRALT-
>UniRef50_Q49YI4(25-223:232) Pseudouridine synthase n=2 Tax=Staphylococcus RepID=Q49YI4_STAS1   E=6e-37 s/c=0.78 id=38% cov=73%
----------------------------------------YLMLNKPKDYISATTDEQ-HKTVLDLIEDYRyldLFPVGRLDKDTEGLLLITNDGQFNHELMSPGKHVAKTYEVISQKNITKNDINAFKVGIELNEGLAKPAKLVQGDELNKSF------------------VTIYEGRYHQVKRMFHAIDNEVLALKRIRIGDLQLDStLASGEYRHLTQ
>UniRef50_UPI0001C37AA4(31-227:255) 16s pseudouridylate synthase n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AA4  E=1e-36 s/c=0.79 id=33% cov=72%
---------------------------------------RYILLNKPKGYVSSTDDKDGE-TVIKLVPPEmrskGLFPAGRLDKDSTGALLITDDGALAHRICSPNNHISKIYAAELSRPFEQEYVEKFAKGIVLANG----------------EACSPCKVQKAENADNLAFVELHEGMYHQVKRMFAAVGNHVENLKRISIGGLILpKDLPLGK------
>UniRef50_Q11U12(95-275:281) Pseudouridine synthase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11U12_CYTH3  E=2e-36 s/c=0.85 id=30% cov=76%
----------------------------------EGRNFTYYAYYKPRGIECTLNAAIENNLLHTLPFGEHVYPVGRLDKESEGLLLLTNDGKLYKDIAFSDNFKEKEYLVEVDKPLTDEAVEQLSSGIVIMGQKTRPARVSMVTEHS-------------------FRIILTQGLNRQIRRMCYKLRYEVTMLKRIRITSIELGDLKPGAYRVLT-
>UniRef50_A1K7C2(150-319:356) Pseudouridine synthase n=1 Tax=Azoarcus sp. BH72 RepID=A1K7C2_AZOSB   E=2e-36 s/c=0.90 id=35% cov=76%
---------------------------------------RVLVYHKPEGEIVSRDDPEGRPTVFERLPllrKGRWLAVGRLDFNTSGLLLFTNDGDLANRLMHPRYELTREYAVRLLGQLTEEQGQSLVDGIQLEDGPARFLSLVDAGGEGV---------------NHWYRVTLAEGRNREVRRMFEAVGLTVSRLMRVRYGPVELPaRLKRGMWMELPE
>UniRef50_A6G735(59-259:300) Pseudouridine synthase n=2 Tax=Bacteria RepID=A6G735_9DELT   E=3e-36 s/c=0.76 id=39% cov=75%
----------------------------------------YYVLNKPDGVVSSAAgsvDERGRPTVISLLHgvSERLYPVGRLDFHSRGVLLLTNDGGLAEALTHPRHGVVKTYHVKFQGKLTEEQEQLLRDGVELDDG-------------AITRPVAELFAFRETATNVWYQIGIREGLNRQIRRMGEAIGHPVLKLIRVAIGDITADGVPEGEFRAL--
>UniRef50_B7L142(47-244:674) Pseudouridine synthase n=9 Tax=Alphaproteobacteria RepID=B7L142_METC4  E=3e-35 s/c=0.76 id=36% cov=77%
---------------------------------PARERTRLWLLHKPRGVVTTARDPEGRPTVFDGLPEelPRVVAIGRLDINTEGLLLLTNDGGLAKVIAHPDTGWLRRYRVRAFGDVTQPDLDKLKKGLTVDGMEYGPIEATL---------------DRAQGDNVWLTLGLREGKNREVKRILEHLGLSVNRLIRLSFGPFQLGDLEVGLVEEI--
>UniRef50_Q1YVK2(27-224:235) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=Q1YVK2_9GAMM  E=4e-35 s/c=0.76 id=37% cov=73%
---------------------------------------RYFMLNKPAGVVSATKD-SNNSTALDLIFEHRsdeLQIAGRLDIDTTGLLLITDDGQWNHRLTSPRSDCQKIYRVTLGIPITPDYAEKLANGVWLKGekHPCLPATMEQIDDET-------------------VLLSIAEGKYHQVKRMFAALGNHVEALHRTQVGGIILDEsLEPGDYRALTD
>UniRef50_C5WHS2(50-227:238) Pseudouridine synthase n=41 Tax=Firmicutes RepID=C5WHS2_STRDG   E=9e-35 s/c=0.83 id=30% cov=76%
--------------------------------------HSYFILNKPAGVVSARSDI-NHVTVLDQLSEkdrhPDLYPVGRLDRDTEGLVLLTDNGPLGFRMLHPSHHVAKTYMVTVNGFLDADAPDFFAAGIKFPtGEQCRPAQLTIL---------------QASQEKSQARLVISEGKFHQVKKMFLTYGLKVISLKRASFAGLELGELASGAYRSLTD
>UniRef50_B6R892(62-259:681) Pseudouridine synthase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R892_9RHOB  E=9e-35 s/c=0.75 id=37% cov=77%
---------------------------------PTRERTRLWLFHKPRGTVTTNKDPEGRKTVFDILPKdmPRVVTVGRLDINTEGLLLLTNDGGLSRVIELPATGWLRRYRVRAFGKVTQEQLDALKDGVAIDGVLYGAIEATLDTEKG---------------DNVWLTIGLREGKNREVKRILEHLDLSVNRLIRISFGPFQLGDLGEGELQEI--
>UniRef50_A3ESK0(67-242:616) Pseudouridine synthase n=4 Tax=Bacteria RepID=A3ESK0_9BACT   E=2e-34 s/c=0.84 id=41% cov=75%
----------------------------------------LFLFYKPKGIVSTLHDPDEKTTLKDFFPQiNPLIHVGRLDIQSEGVLLLTNNGDLAQRILHPRYEIPRTYLVKVQGVVKPEHLDRLRSGkVRLDGRPVQPLELEQ---------------ERLTETNSWYRITLTEGRNREVRRLFDALHYFVLKLTRIAFGNLDLAGLEPGEYRLVT-
>UniRef50_A5ZYR1(40-229:315) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A5ZYR1_9FIRM   E=3e-34 s/c=0.77 id=35% cov=76%
--------------------------------RPVKAETRqvLLLFYKPRGIVCSTKKQRQETTVTEFLDYPvRVYPVGRLDKDSEGLLLLTNQGDLVNRIMRAGNYHEKEYEVTVDKKITETFIRKMSSGVPILGTVTRPCTVYKTGDKS-------------------FSIILTQGLNRQIRRMCEYLGYHVCTLKRIRIMNLTLDGLKCGEYREI--
>UniRef50_Q8Z1V3(26-226:289) Ribosomal large subunit pseudouridine synthase F n=235 Tax=Bacteria RepID=RLUF_SALTI  E=4e-34 s/c=0.73 id=32% cov=73%
----------------------------------------LIALNKPVGIVSTTEDGE-RDNIVDFVNhSKRIFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPF-------------------VFRITLVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTD
>UniRef50_Q0G3T3(209-406:639) Pseudouridine synthase n=4 Tax=Alphaproteobacteria RepID=Q0G3T3_9RHIZ  E=2e-33 s/c=0.73 id=36% cov=77%
---------------------------------PQAERTRLWLFHKPAGTVTTNKDPEGRRTVFDMLPEdmPRVLSIGRLDINTEGLLLLTNDGGLSRVLELPSTGWLRRYRVRAHGSITQAKLDELRNGISVDGVFYGAIEATL---------------DREQGSNVWITLGLREGKNREVKNVLGALGLEVNRLIRLSYGPFQLGDLAEGSVREV--
>UniRef50_UPI0000D52F9C(43-229:242) putative ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase) (Uracil hydrolyase) n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52F9C  E=4e-33 s/c=0.76 id=27% cov=75%
--------------------------------------TRLFVLNKPTGVICSKKTEGNLRSIYDLIPKidneKNLMIVGRLDANSSGLIFFTNDGNLSEFIAHPSNLFDREYLVRARGHFDEEIKENMLRGIKIDNQLLRLSDI---------------VDGDKTNSNRWYTVCLLTGRNREIRKIFESQGLQVSRLKRVRFGPIFLpKGLKEGDWQEL--
>UniRef50_B9JSE7(140-305:704) Ribosomal large subunit pseudouridine synthase B n=4 Tax=Alphaproteobacteria RepID=B9JSE7_AGRVS  E=8e-33 s/c=0.86 id=31% cov=75%
--------------------------------------TRLWLYHKPSGLVTTNSDPEGRPTVFDNLPEelPRVMSIGRLDINTEGLLLLTNDGGLARVLELPTTGWLRRYRVRAYGEIDQAKLDTLKDGIAVDGVLYGAIDA---------------VLDRSQGHNVWITMGLREGKNREIKNVLGALGLEVNRLIRISYGPFQLGDLPESQVQEV--
>UniRef50_B2UMD6(39-233:467) Pseudouridine synthase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UMD6_AKKM8  E=1e-32 s/c=0.73 id=31% cov=73%
----------------------------------------VVLLNKPRGYVCSREAQGAIGTVYDLLPPrlRHLNYVGRLDADSEGLLIMTNKGELTQVLSHPTGGIEKEYWVTVDQNFDNSVLMQFLRGVRIPEGN---AKAKYVCRASARRAC----------------IVLEQGLKRQVRQMFQCLGLRVRKLVRVRIGSLWGGDLEPGGWKFLDD
>UniRef50_A9SG51(276-482:560) Predicted protein n=3 Tax=Embryophyta RepID=A9SG51_PHYPA   E=2e-32 s/c=0.68 id=29% cov=83%
-----------------------FLDGRSLPKKP--PPKFYFALNKPKGYICSSAKDAPKPalsLLEDYwkiwdkknpgVSRPRLFTVGRLDVATSGLLLITNDGDFAQRVSHPSSGLTKEYIATVTERVTKRQLQLIAGGTKVQDVHCVPTEVELLPPEPGDAR-------------NRIRIVVCEGRNREVRELVANAGLEVLALKRVRIGGLSLSrKLSPGKFEVLTE
>UniRef50_C7RHU0(40-222:233) Pseudouridine synthase n=3 Tax=Anaerococcus RepID=C7RHU0_ANAPD   E=2e-32 s/c=0.77 id=32% cov=72%
----------------------------------------YIKLYKPRGYITSNFDPYNDRDLNDLVKlDQRFFAAGRLDKDSEGLLIITNDGIFTNQIIHPSKKLDKTYIVRVSRLLNKEECQQFESGIDIGDsEMTSDSRIELIDKTSKTY-----------------KVTIHQGYNRQIRRMFAYFSSEVKMLKRISIGPIKLDGMKPYEKR----
>UniRef50_A9NGL0(27-227:238) rRNA pseudouridylate synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGL0_ACHLI  E=3e-32 s/c=0.70 id=21% cov=77%
------------------------------------EPLVYYLLNKPTGYLSTTADIHKRRNILDLILKEdqnvRLFPIHKLEYDTSGLLLVTNDGELTKKLTSQSESIQKEYVIRTKGIMIKERIREIKRGIKVENKIIKPVDIAIVE-------------LDKAHQSTLVKMIITNESAKELKTMFKQLGHEVKNMTRIRFDSLTLEGVNRGSYRKL--
>UniRef50_P42395(45-234:257) Ribosomal large subunit pseudouridine synthase B n=5 Tax=Buchnera aphidicola RepID=RLUB_BUCAP  E=3e-32 s/c=0.74 id=30% cov=77%
-------------------------------KRNKNLPK-VLIYNKPIGEVCTRDDFQKRLTVFDKLPKlnlNRWVSVGRLDINTKGLLLFTNDGTLANKLMHPRSQIEREYNIRIFGEMNKNKINILRKGVKIIHGYVSFKEI-------------VPLYDKKEGKNKWFKGILCEGKNREIRLMFKSIQCQVNQLIRVRYGNIILpKNLKEGQW-----
>UniRef50_UPI0001BC345F(60-227:240) ribosomal large subunit pseudouridine synthase F n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC345F  E=4e-32 s/c=0.83 id=30% cov=76%
---------------------------------------KVYAFYKPVGYISSLSDEQGTG-IASFLPQGmGLFPVGRLDKDSEGLMLITNDGNLMNEILNASNGHEKEYIVTTRQKFNNDFLVKMAKGVPITNRAT------------GKKIITAPCKTEALEDNS-FKITIIQGLNRQIRRMCGYFDIDVVSLKRVRIMNIMLGNMRPGELKELSQ
>UniRef50_A9NFY3(33-223:236) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFY3_ACHLI  E=6e-32 s/c=0.73 id=26% cov=76%
----------------------------------------YILLNKPVGIVSTTNTAISGNMITFMNFKEKIFPVGRLDKDSHGLILLTNDGSIVNKILRVENGHDKEYHVTLNKPYDDYFIETMTSGVEIYNPVAHEKQMTMPSILKPLDERT-------------FSLTIRQGLNRQIRRMADSLGYRVESLERVRIMHLTLGDLPVGYWRYLT-
>UniRef50_D0J9Y2(44-237:255) Pseudouridine synthase n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0J9Y2_BLASP  E=7e-32 s/c=0.72 id=32% cov=75%
-------------------------------SRIKNKKKIYILLNKPKGYITSTRDPFNRKTVMNLIPnfqNYRIYPVGRLDRLTTGVLLLTNDGFITEKLTHPKYKIQKIYLVVLNKTIHYQDLDKIRQGkIYLNEGRVKIDFLHKYAKN-------------------IVKIGLHIGWNRVIRRIFKKLTYQVIKLERIHFGGFTNKNLKIGSW-----
>UniRef50_C6XB83(255-449:455) RNA-binding S4 domain protein n=2 Tax=Methylophilaceae RepID=C6XB83_METSD  E=7e-32 s/c=0.71 id=38% cov=60%
-------------------------------------------------------------------FLKGLAPAGRLDIDSTGLLVLTQDGRVARQLIGEDSQTEKEYLVRVEGTLSDEGLRKLNHGLSLDGVQLKPAKVSWQNEDQ-------------------LRFVLREGRKRQIRRMCELVGLHVVGLKRVRIGSVALGKLPPGQWRYL--
>UniRef50_Q73PD9(45-235:245) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73PD9_TREDE  E=8e-32 s/c=0.73 id=32% cov=75%
----------------------------------------YLMFNKPQGCVTSTSDP-VHKTVMDYIKAPfdrmTLFPIGRLDIDTEGLLIITDDGEITHKITSPKSGTVKTYYLELSREPSDEEFknycEEFEKGIVLKNGyKCLPAKFEKCENKTGSFR-------------SGFLMHITEGKFHQVKKMCLSAGNELCYLRRIAVGSIVLDEtLKTGEYRELS-
>UniRef50_O96270(110-327:338) Pseudouridine synthase, putative n=2 Tax=Plasmodium RepID=O96270_PLAF7  E=1e-31 s/c=0.63 id=29% cov=86%
-------------------------------KQNENKLHKWIVLHKPKGLLCTSNDEKNRKSIYTLFPEEmlqkyRLVTVGRLDRNTSGVLLLTNDYAWVNKLTHPKYQRIRTYRVHIEGPVKMNALKELARGIYLeEDEKTQPKKIYNYKESREKSniddkkkkkmskmkkktnpafieilREEKIKIKEDTKKITVLNISIKEGRNRQIRKMFQQINQPVIKIKRTSFENITLKNIYfPKQYRELNQ
>UniRef50_C8PTK2(64-235:246) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTK2_9SPIO  E=2e-31 s/c=0.80 id=34% cov=75%
----------------------------------------YLMLNKPAGVVTSTADPL-HSTVMELLPPPfpamELFPIGRLDLDTEGLLIITNDGALTHRLTAPKSACIKSYYLETAEPFTESTFTAARiacaEGLPLgKNFTCLPATFERTTSQRVKTEWA-------------FLMHICEGKYHQVKKMVKALGNEVVYLKRIAMGGVTLDpKLPAGSCRELT-
>UniRef50_A8FRI1(8-209:218) Pseudouridine synthase n=17 Tax=Bacteria RepID=A8FRI1_SHESH   E=3e-31 s/c=0.68 id=38% cov=86%
-----------------------FNTECLSIRDASQPHHHYKIF-KPYGYLSQfvPERRKSKKLLAELaLFPAGTMAIGRLDHDSEGLLLLTTDGMVSHQV--RSKKVEKEYYVQVDGDIDDAAILKLQTGVEIgikgEKYLTLPCKVFKLENEPELPSNGRKPRDPKHGPMSWVSITIGEGKNRQIRKMTAAAGFPTLRLVRVRIGNIHLDRMQSGEV-----
>UniRef50_D0NXA7(18-218:238) RNA pseudouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NXA7_PHYIN  E=2e-30 s/c=0.67 id=32% cov=76%
------------------------------------QKTKVWMAYKMKGELVTNSDPQDRATIFDRLRVmgltQHMMPVGRLDFNTEGLLLFTNDGDYARELEHPKTGVSRVYRALVRGNVAESKLEELKRGPLVDGVKYRPIKVTVQS---------------TDKKDSWLQVKVAEGKNREVRKALAHVRLVVKQLIRVQYGPYRLADLPSGAVLEV--
>UniRef50_A6LLC7(29-221:230) RNA-binding S4 domain protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LLC7_THEM4  E=4e-30 s/c=0.69 id=30% cov=71%
----------------------------------------YIIFNKPTGY--TSSKSEFERNIFEFIDhpyVENLHIAGRLDKDVEGLLLITNDGIFTHKITSPKSKIEKEYIVKVDKEISDEMIQKAKDGIVLKNGtRFKPAIIKRLKDN-------------------FISITITEGKYHEIKLIVKFLGLSYKKIERIRIGKLKLEDfnLKRGEWSEI--
>UniRef50_A9BZ50(57-239:249) Pseudouridine synthase n=49 Tax=Betaproteobacteria RepID=A9BZ50_DELAS  E=8e-30 s/c=0.72 id=39% cov=61%
--------------------------------------------------------------------VQGVQAVGRLDQDTTGLLLLSDDGQFIHRMSSPKKHVPKIYRVTTKHPVDASQVQRLLDGVVLDDDP-KPVKAAACE----------------QVSEHVLDLTLTEGKYHQVKRMIAAVGNRVEGLHRWKIGELELtEDLQPGQWRWLT-
>UniRef50_A6Q895(5-176:188) Pseudouridine synthase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q895_SULNB  E=9e-30 s/c=0.77 id=31% cov=75%
--------------------------------------KKLLVLNKPKGYVVTRSDELGRKTVYDLLPDWAFHdgwmPIGRLDLESKGLLLFTTDGKIGDALTRPGNCI-KVYEIWVRGHVTDEHIAEAKRGVESKHGLLKALVVEKLGTGGAK---------------TKLKIVIDEGKNRHIRRLFGALKdpkfgtpLKVLELKRISIGSFEL-DIESGKWRYLT-
>UniRef50_B0SGV7(26-238:247) Pseudouridylate synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SGV7_LEPBA  E=3e-29 s/c=0.61 id=32% cov=86%
-----------------------FDGKPVTKEEGSDSRPKIIAFNKPPGFLTSHEDKHHENTIFTLLPEsfQKYNYAGRLDLDSRGLILLSIDGNFIQKVTHPKNKIDKEYIISLKQPVSWKKIaEEFMLGVR-EGGETLRALA--VKPANVFPEKTPP------GFTSYLSIVLKEGKKRQIRRMCKTKDLVVLDLYRIRIGKLDLRnfDLLEGKYKVVTE
>UniRef50_Q03AT5(25-225:236) Pseudouridine synthase n=8 Tax=Lactobacillus RepID=Q03AT5_LACC3   E=4e-29 s/c=0.65 id=36% cov=73%
------------------------------------------LMNKPAGVITATEDPTQ-STVLDLIRPhdyrPGLYPVGRLDKDTTGLLLLTTDGNLGHALLSPNRHIAKTYAATLAKTLTADMKQRLETGIDLKDFTTAPAQVVVLPDTDGKR----------------IQITITEGKFHQVKRMLLAVDNEVTALTRIAMGPLSLPaDLAAGEYRALTD
>UniRef50_C9RMP5(62-227:234) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMP5_FIBSS  E=7e-29 s/c=0.78 id=37% cov=60%
----------------------------------------------------------------------GIQSVGRLDADSSGLLLLSNQGDFIHKVESPKKGLWKKYRVTLARPFTDAQKAELLAGVMLKDERRPVLAREIEVSGDA------------------VDISIGEGLYHQVRRMFAAVGNHVETLERIAIGPVVLDrTLGEGGWRFLTD
>UniRef50_Q38AZ7(373-569:688) tRNA pseudouridine synthase A, putative n=4 Tax=Trypanosoma RepID=Q38AZ7_9TRYP  E=2e-27 s/c=0.63 id=26% cov=89%
-------DNVVERNPFRLVRAENNIHVASHSGRLRFAPPRLWMYHKPAHVIVSRNDVAGRALFtkhARILGMDHLVPVGSLPMRAHGLLLLTNDGELSRFLENPKCMIQQTYLLRVRPAVDPVLAHKLNfQGITINGKQYK--NMEFFVNPAMKSRFSLKVKVR--------------GEVMPVAHLMQHLGRTVERGGRISFGPFSLSGLPVGSLREVT-
>UniRef50_B7FTM7(36-236:252) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTM7_PHATR  E=6e-27 s/c=0.61 id=39% cov=57%
--------------------------------------------------------------------------AGRLDINSTGLLVLTQSGRVAKTLIGPDVRVDKEYLVRVRPSPffdrnqsTAAVLERLRDGIRDAGELLHAVSVERVNTDQ-------------------LRFVLHEGKHRHIRRMCRAVGLEVDGLKRVRIGEIVLGNLPVGQWRYL--
>UniRef50_A9NHG2(38-225:231) Ribosomal small subunit pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHG2_ACHLI  E=4e-26 s/c=0.64 id=29% cov=74%
----------------------------------------ILSFYKPAGYLSSH-KAEIYPSLFELIGAPynqyDLKIAGRLDYDSEGLVILTTSGDLVHQITHPKKKIRKVYEAKLDKHFNESSKLKLLQGVEIMG-------------EDGMPYIGIALDLHYKEDVAY--ITIDEGKFHQVKKMFLEVGFLVTNLKRIQIGALTL-DLEPGTYKEIEE
>UniRef50_Q04HA3(60-255:302) Pseudouridine synthase n=2 Tax=Oenococcus oeni RepID=Q04HA3_OENOB   E=6e-26 s/c=0.61 id=20% cov=67%
----------------------------------------YLLVDKPAGMKMHPHSPNETDTLLNYVEaqlkghlsrscPAHAFMVHRIDRDTSGVVIIAKNPLAVGILDQllAKKRIKRTYLAWVSGNLENKKG-SIDQAIAVD--PINP--YKRIVDQAGQKAVTHWTKIHTVYQNTLVRVSLETGRTHQIRVHFAAIGHP---------------------------
>UniRef50_A4J9H9(73-270:320) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A4J9H9_DESRM   E=5e-25 s/c=0.59 id=24% cov=67%
----------------------------------------LLVLNKPAHQLVHPTGQTTRGTMANYLAyylkqrnvVSAIRPVHRLDRETSGCVIFAKDSRSQFILEQQlkERTLKRTYWALVKGIVHPPSGT-----IDAPIGPHPSLANRRAINEHGEQSITHYQTLRSFPEISLLKLNLDTGRTHQIRLHLAHLGYP---------------------------
>UniRef50_B0K860(78-237:285) Pseudouridine synthase n=11 Tax=Thermoanaerobacterales RepID=B0K860_THEP3  E=2e-24 s/c=0.71 id=24% cov=66%
----------------------------------------ILIVNKPANMVVHPTKRYQSGTLANgvawYFKEKGLkaliRPVNRLDRGTSGLVVFAKRPFMQYYLQIIK-PMTKLYFAVVEGKMEGEGR------IDLPISRKPQSGIERMVSEEGDRAITNYKVVKSSKRFSLLKVKIETGRTHQIRVHLSHIGHP---------------------------
>UniRef50_Q01Q94(78-248:296) Pseudouridine synthase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Q94_SOLUE  E=6e-24 s/c=0.66 id=30% cov=21%
----------------------------------------------------------------------------RLDRFTSGVLLVAKNDAAHQKLaaQFSGREIEKVYLALVHGTVKPET------------------------------------------------------------------------------------------------
>UniRef50_B7GLK3(82-248:292) Pseudouridine synthase n=11 Tax=Bacillaceae RepID=B7GLK3_ANOFW   E=1e-23 s/c=0.66 id=21% cov=53%
-----------------------------------------------------------------------VHVVTRLDRDTSGLVLVAKHRHVHHLLSEQQKQgrVKRRYEAVCHGYV-----IQLVGTIDAPIGRKGDSIIEREVRLDGQRAVTHYEVLQQKNEMTHVSIQLETGRTHQIRVHFSHIGHP---------------------------
>UniRef50_Q1N5G6(9-190:236) Pseudouridine synthase n=1 Tax=Bermanella marisrubri RepID=Q1N5G6_9GAMM  E=2e-23 s/c=0.61 id=24% cov=60%
---------------------------------------------------------------------KHVFPVHRLDRPTSGVLLFGFSGEIAQQVQAQWEQANKTYWAVVRGWLKEQTLVDHA----LKGMADYGQDVEIVQEAQTHFKPIDYVEIDAEIDrypksrFSWVEAKPKQGRTHQIRRHLKHLSHPIIGDARYGKGKYN--------------
>UniRef50_D2L0S2(71-263:558) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0S2_9DELT  E=3e-23 s/c=0.57 id=23% cov=52%
-------------------------------------------------------------------------IVHRLDKDTSGLLMVALTEpvRLALAADFAARQVHKTYLALVHGRPDGKGGD-----IRLPIGRDPKYRTKMaVPHKGGRPAHSRWRPVwtAPDGTASLLEVTIFTGRTHQIRVHMAAIGHP---------------------------
>UniRef50_D2RJC8(81-242:294) Pseudouridine synthase, RluA family n=2 Tax=Veillonellaceae RepID=D2RJC8_ACIFE  E=4e-23 s/c=0.68 id=23% cov=53%
----------------------------------------------------------------------GIHPLYRLDRDTTGVLMVAKSAFAKHALTRDHSQIYREYLAVCEGRWGIPQGR-----IEHPIGRVAEGVDRWTVRPDGRPAVTEYRILEENQEWTVLKIHLLTGRTHQIRVHFAHEGHP---------------------------
>UniRef50_B1YJB1(83-250:293) Pseudouridine synthase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJB1_EXIS2  E=5e-23 s/c=0.65 id=24% cov=66%
----------------------------------------LLIVNKPPGMASIPSRLHPERSLSNFVlgyyrqhqIPYAIHIVNRLDRDTSGLVVFAKHSLAHHQLskMQQNGLLDRRYVALIEGTIPAQT-------IDLPIGQTDHSFMERMVREDGQQAITHILTSEPitafSRELSRLTIKLETGRTHQIRVHLAALGHP---------------------------
>UniRef50_Q5FSR8(51-208:265) Pseudouridine synthase n=1 Tax=Gluconobacter oxydans RepID=Q5FSR8_GLUOX  E=6e-23 s/c=0.69 id=26% cov=53%
--------------------------------------------------------------------------AHRLDADTSGCLLVArrKTALIEAQKAFQERQAHKLYWAVVVGDLPQDSGEIDAPLLRQSD----ASGWRMVVDAKGDEARTRWRVLGRSKGLCWVELELLTGRTHQARIHCAELGTPIL-------------------------
>UniRef50_A5VLP2(82-246:290) Pseudouridine synthase, RluA family n=13 Tax=Lactobacillus RepID=A5VLP2_LACRD  E=7e-23 s/c=0.66 id=24% cov=50%
----------------------------------------------------------------------------RLDRFTGGLLLIAKHHIASSMISQqvQQHQMLKEYTALVEGQVMDEHGE-INKPIGRKDG-----QAARVIDENGQRALTEYWVEERGAKWTRVRVRLHTGRTHQIRVHFAAIGH----------------------------
>UniRef50_Q7VI73(38-260:303) Pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI73_HELHP  E=9e-23 s/c=0.49 id=22% cov=69%
------------------------------------------VYDKPHNLLTHPKGRFYHYSLNDALKLRfgnYANAIHRLDKQTSGLVLCAINPQSEPELKEliSTRQILKTYYAIVEGKLTQECL--IDEPIALQKYKGTDLSIKSIISPYGKPSRTklYPLAYHSPTDSTLIRVLPLTGRTHQIRLHCAHIGHRIL-------------------------
>UniRef50_B7G3Y8(33-217:217) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G3Y8_PHATR  E=1e-22 s/c=0.58 id=27% cov=60%
---------------------------------------------------------------------KRIFPVGRLDKETSGLILLTSDGRVPNAVLRGRHKQPKIYQVWVDRPVLAKDVAQLRDGVII-----TTVAQRDGNRAEPLTARTKSCAVQVLGRE-KLQLTLVEGRNRQIRKMLGALNYTVKRLHRVQFMELTL-------------
>UniRef50_A8RUB2(60-304:366) Pseudouridine synthase n=3 Tax=Clostridiales RepID=A8RUB2_9CLOT   E=1e-22 s/c=0.44 id=22% cov=68%
----------------------------------------ILVVNKPSGMLSQKAKDSDMSLneyILNYLIDSGKLPIsqlrtfkpsicNRLDRNTSGLVVAGKSLAGLQVMNevFKDRSIHKYYQCLVAGEIKE---KQLIAGFLKKDESTNTVSIFPLEVEDSVPIMTEYLPLSGNKTFTLLQVTLITGRSHQIRAHLASIGHP---------------------------
>UniRef50_C6J6E3(52-261:321) Pseudouridine synthase n=2 Tax=Bacillales RepID=C6J6E3_9BACL   E=1e-22 s/c=0.51 id=19% cov=53%
------------------------------------------------------------------------RPVHRLDQETSGLIAIAKNAYVHQHISEQliAGEVTKKYTALVHGCPAVPEGTI--DG-PIDRDPAEPH--RRIVTPSGYPSLTYYKVAEAYGDGARVELRLGTGRTHQIRVHMTSIGHP---------------------------
>UniRef50_Q8DCG0(15-189:250) Ribosomal large subunit pseudouridine synthase A n=82 Tax=Proteobacteria RepID=RLUA_VIBVU  E=2e-22 s/c=0.61 id=23% cov=54%
---------------------------------------------------------------------PEIQVVHRLDMSTSGLMVFAKNKRAEAALkkQFQYRLTHKVYYARVWGHVEADSG--MIDLPLICDWPNRPMQ--KVCHEHGKPSQTAFQVAKRevhanGAQTTIMRLLPVTGRSHQLRVHMQALGHP---------------------------
>UniRef50_C1A885(87-254:329) Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A885_GEMAT  E=4e-22 s/c=0.63 id=22% cov=51%
----------------------------------------------------------------------------RLDKDTSGLLVVAKSDAAHRTLSSalAARQVTRRYAAVCWGHLAEERIT-----VEKPIARDPRDRTRMAIVQSGKASRTDFTRLARFDSVDLLRAHLHTGRTHQIRVHLASTGHP---------------------------
>UniRef50_C1MMY3(85-285:305) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MMY3_9CHLO  E=4e-22 s/c=0.53 id=31% cov=80%
--------------------------------EPAEAPDGLLaLMHKPRGRVCGHDASEG-PSVYDLLPErwrarrPGVETIGRLDKDTTGLLLLTDDGDLLHRLASPKKRVEKVYELVVDAPIPRDAVDLFASG-----------SLTLTGEKKPCLPAKLIVSERADHNRTRASLSVTEGKFHQVKRMMRAVGCEVTALHRESFGGMALSrmELREGEVRVLS-
>UniRef50_D1VS73(52-246:295) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS73_9FIRM  E=4e-22 s/c=0.54 id=24% cov=53%
-------------------------------------------------------------------------IVHRLDKNTSGLMIIAKNNQAHINLvdQFKNSQIKKYYLAIVHGKTPESGIIAEPIGRNPNDR-----KKMAVVYKNSKQAITKYKKLKEFQEYSLLNINLLTGRTHQIRVHMAYIGYPVL-------------------------
>UniRef50_A1ALH6(70-244:306) Pseudouridine synthase, RluA family n=9 Tax=Desulfuromonadales RepID=A1ALH6_PELPD  E=8e-22 s/c=0.60 id=31% cov=36%
----------------------------------------LIALNKPAGVNTQRTPYQLKGTLeywaSEYFRRQGnpepARVIHRLDRGTSGVMLFPKHKRAAAWLSKRFHdgQVEKRYLALVSGTP----------------------------------------------------------------------------------------------------
>UniRef50_Q89AH2(90-263:315) Ribosomal large subunit pseudouridine synthase C n=5 Tax=Buchnera aphidicola RepID=RLUC_BUCBP  E=2e-21 s/c=0.60 id=21% cov=56%
----------------------------------------------------------------------------RLDRDTSGVLIIAKKRSILRNLHEQlrEKKIKKKYVALVHG-VWPDILKSISKPLLKTSSRKNKNIVKI--DPKGKESITHFNIKKKYTKNTLISITPITGRTHQIRVHLLHLNYPIVLDAKYGI------------------
>UniRef50_C4XSN0(99-265:554) Ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSN0_DESMR  E=2e-21 s/c=0.62 id=23% cov=52%
----------------------------------------------------------------------------RLDKDTSGLLLVAQTESARLALAadFAERRVAKTYLALVHGRPERSDGVI---ELPVGRDPKHPTKMAVVAKGGREAKSSWKLaWTAPDGTASLLEVAIATGRTHQIRVHMAAMGHP---------------------------
>UniRef50_C9RKF9(148-324:386) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKF9_FIBSS  E=3e-21 s/c=0.59 id=21% cov=55%
-------------------------------------------------------------------------IAHRLDQETSGLIIAALHGDTLRDFTRmiREHVVDKFYFALVKGNLKKDRGTISESLLRTDSAKGSKMLVG-QDDENAQKAITHYRVKQHYEGYDLVKIKLETGRMHQIRAHFASIGHPLL-------------------------
>UniRef50_Q2SJX2(107-263:297) Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJX2_HAHCH  E=5e-21 s/c=0.66 id=27% cov=53%
----------------------------------------------------------------------------RLDREAMGLVIIAHNKAAAGRFgaLLQDNALDKFYLARVKGRLAQEQGE-----------------IDFPVDGKSALSYYQVQHYDDATDSSLVRVKLITGRKHQIRRHFADLGYPLLGDPRYGSGNKHEDGL----------
>UniRef50_A4RSB2(44-247:249) Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4RSB2_OSTLU  E=8e-21 s/c=0.50 id=33% cov=58%
---------------------------------------------------------------------------GRLDKDSRGLLILTEDGALARSVI-GGNGVLKKYVVTTDADVRESHMRSLNGRVQLDGVELLPMNVQRLGHGSRT-----------------LEFNLREGKNRQIRRVCEKFGLRVVDLHRVQIGDVQIGDLPEGAWRLMSE
>UniRef50_C4Z9Y6(60-280:324) Pseudouridine synthase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9Y6_EUBR3  E=1e-20 s/c=0.46 id=21% cov=72%
----------------------------------------ILAANKPVNMLSQKSKEtdisANERLIGYLIKEGKLdfdtyksfkpSVCNRLDRNTSGLILMGKSLHGLQYLSQvlKARTAEKYYMALVAGEVDEPM---TIEGFLTKDEAVNKVQITREPiSDESLPIKTAYRPLKTIDmsaschKATLLEVHLITGRSHQIRAHLSSIGHPI-------IGDIKYGD-----------
>UniRef50_A5E2D2(179-367:622) DRAP deaminase n=4 Tax=Saccharomycetaceae RepID=A5E2D2_LODEL   E=1e-20 s/c=0.54 id=25% cov=53%
-----------------------------------------------------------------------LHPCNRLDRLTSGLMFLGKTAKGSTKLMTQikDRNVSKEYIARVKGKFPKESITVDQPLLTLNPRLTL----NVVDFVKGKEASTEFKRisYDPKTNTSVIKCHPLTGRTHQIRVHLQYIGYP---------------------------
>UniRef50_D0L1K7(88-278:346) Pseudouridine synthase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1K7_HALNC  E=2e-20 s/c=0.53 id=25% cov=53%
--------------------------------------------------------------------------AHRIDRDTSGLLILAKTRATLHSLQtqfRPEGHAEKQYLAIVHGHWPDKLKRVDA---PLEKWQGEGESHRVQVNPQGKEAVTHFAVLAANKNATLLRAQLETGRTHQIRVHTAHENHP---------------------------
>UniRef50_A0LBW6(11-176:224) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBW6_MAGSM  E=4e-20 s/c=0.60 id=30% cov=35%
----------------------------------------LLIFNKP-NRMPIYRGPGGGETLADHLPQlcfergKPPAAVHRLDSATSGCLVLGRHKGMRRSLsnLFAQGGVEKLYWAVVQGRP----------------------------------------------------------------------------------------------------
>UniRef50_A6G930(60-283:356) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G930_9DELT  E=5e-20 s/c=0.45 id=20% cov=70%
----------------------------------------VLVLDKPGNLPVHPTARYHRHTLTALMrrrlgPKHGWEMAHRIDRETSGVIIFGRRKASGPKIkgSFFRREVHKEYLAIVLGRLELPEGPRLID-MPLGSAVGSKIMIKMGprpVDEGGLPAQTTIEVLahgeHRGQPITLVRCLPRTGRTHQIRVHLAEIGHPIL-------------------------
>UniRef50_A3VN52(94-274:324) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN52_9PROT  E=8e-20 s/c=0.55 id=23% cov=59%
----------------------------------------------------------------------------RLDRDTGGVLLLAKSRAVAATlsLAFQQHRIGKTYWAITKGVPHPLFGR-----IDMRIEKAGePGREKMRGTEQGQSALTDYqTVETAGQKAAFLALRPHTGRTHQIRVHLSAIGTPIVGDRKYGGAGAVLEGLP---------
>UniRef50_B2IK20(84-276:350) Pseudouridine synthase n=2 Tax=Beijerinckiaceae RepID=B2IK20_BEII9   E=9e-20 s/c=0.51 id=25% cov=53%
----------------------------------------------------------------------------RLDRDTSGVLLVAKTRRMAAELgeIFRSRQARKIYWAVVEGVPKPAQGRIslyLAKGEGMEDKRGPhgrdaearagleKMRVAKHGEEDARHSVTYYaIVDKVPSRLAWLSMKPITGRTHQLRAHAEAIGHP---------------------------
>UniRef50_D1ASB1(59-263:299) Pseudouridine synthase n=1 Tax=Anaplasma centrale str. Israel RepID=D1ASB1_ANACI  E=1e-19 s/c=0.48 id=29% cov=35%
----------------------------------------VIAINKPAGVSVQGGSKVGV-SIGDLLDKIRPggccRIVHRLDKDTSGVLVLARDLDVARCLAreFRERRVQKEYIAITKGVP----------------------------------------------------------------------------------------------------
>UniRef50_B1ZUV5(39-208:279) Pseudouridine synthase n=2 Tax=Opitutaceae RepID=B1ZUV5_OPITP   E=2e-19 s/c=0.58 id=30% cov=28%
---------------------------------------RLLVVAKPGDVVCHPSKAGPWSSLVgavrEFTGLATVHLVFRLDRETSGIVVLAKDPKTASRL-----------------------------------------------------------------------------------------------------------------------
>UniRef50_C9RJ15(88-275:321) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ15_FIBSS  E=2e-19 s/c=0.52 id=26% cov=52%
----------------------------------------------------------------------------RLDRDTGGLILFARYGETAARFQKNLDRIllRKFYLAVVRGKFPEGEVEC---HMPLREDPEDPIRLRMHHREGGKECFTRFKLVRHldcpeiAPELSLVEAELITGRKHQIRAHLAEMGYP---------------------------
>UniRef50_C0QC81(75-240:295) Pseudouridine synthase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC81_DESAH  E=5e-19 s/c=0.58 id=21% cov=53%
-----------------------------------------------------------------------IHPVHRLDQETSGLILVATDPDRLRYLsnLFQQGAVQKHYIALVHGNFDPP-----CDPFQVWDTPLSKQAGGRTDPRGKgkrVRSETRYRIMDQSPHYTLLEIELVTGRKHQIRRHAKLAGHP---------------------------
>UniRef50_C4KBT4(3-205:648) Transaldolase n=2 Tax=Proteobacteria RepID=C4KBT4_THASP   E=5e-19 s/c=0.48 id=28% cov=55%
-----------------------------------------------------------------------VYPAHRLDRGTSGVLLFALDREVARTLAQRfeAQAVDKRYLAVVRGHPPehgviEHALVRRLDAVEVRSGKGAGARDALpedvddsdspeAAEPVAQPARTRFRRLatvelphavdrYPSSRYALVELLPETGRRHQLRRHLKHIAHP---------------------------
>UniRef50_C7MN62(84-269:347) Pseudouridine synthase n=8 Tax=Coriobacteriaceae RepID=C7MN62_CRYCD   E=6e-19 s/c=0.52 id=19% cov=52%
----------------------------------------------------------------------------RLDMDTSGLMMCAKDDTCGMALQDlvRDHKVDRRYLTLVHGNIAFDTGQ-IDEPIGRVGDDRLRMKISY--RPTARNALTTFTVLerfeagRADNGYTLLECRLYTGRTHQIRVHMEFIGHCC--------------------------
>UniRef50_D0BPC6(66-262:304) Pseudouridine synthase n=7 Tax=Fusobacterium RepID=D0BPC6_9FUSO   E=8e-19 s/c=0.49 id=18% cov=67%
----------------------------------------LFVINKPLGDVVHKGSGHDISLLEEfrsYYSNNNINFVNRIDKLTSGLVIGAKNIKTAREVAKeiQAGNIVKKYYILVNGKIEKDNF-ILENYLKKDEER---VIVSDIEKEGYKKSITYFKKIKEYDKYTLLEAELKTGRTHQLRAQLNHLG-----------------------------
>UniRef50_A0Z298(103-270:320) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z298_9GAMM  E=1e-18 s/c=0.57 id=25% cov=52%
----------------------------------------------------------------------------RLDRDTSGLLLVARRASTLRNLhvLLRSNGIDKRYLCLVNGRWPA-HLKRVDAPLE---KFALPSGERRVkVAATGRQSLTTFRVVRRWSSATLVEAKPVTGRTHQIRVHCQHAGFPIL-------------------------
>UniRef50_C7H0C0(62-286:322) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0C0_9FIRM  E=1e-18 s/c=0.42 id=22% cov=70%
----------------------------------------LLVVYKRAGLLTHGSSTEKKRTLLNevktYLIQKGEYDPGfektfslatsnRLDRNTEGLIAIAKNAASQRELnaAFKEGRIERYYVAEVVGEVRGDVTIDYPLYKSAKNNTVFADKDGSVPPDVTKEAITKVHPIRVNRidkngsefTYTVVRVKLLTGRTHQIRVHLAAIGHP---------------------------
>UniRef50_Q1MQF8(106-294:321) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q1MQF8_LAWIP   E=1e-18 s/c=0.50 id=23% cov=52%
-------------------------------------------------------------------------PVHRLDKDTSGLLLVAKTynslRYFSELFASHSTQLTKEYLAWVVGICP------WTQPICLEDILTKKQKQDnysrlnsyqnKLQQTSAQKASLTVRCIKQYKDKSLLLIKLHTGRTHQIRIQLSIHGFP---------------------------
>UniRef50_A6GN92(105-271:388) Pseudouridine synthase n=1 Tax=Limnobacter sp. MED105 RepID=A6GN92_9BURK  E=1e-18 s/c=0.57 id=29% cov=24%
----------------------------------------------------------------ELIHVPRAGIVHRLDADTTGLMVVARTQETQVKLvqMLQARIVKRVYLAMVWG------------------------------------------------------------------------------------------------------
>UniRef50_B9W8E1(105-276:405) Hydrolase, putative (Drap deaminase, putative) n=5 Tax=Candida RepID=B9W8E1_CANDC  E=2e-18 s/c=0.55 id=20% cov=53%
----------------------------------------------------------------------------RLDKVTSGVLVLAKTKnggvKFSKLMRDSKQHTKKTYLARVSGKFP-EGIHQYRCPIFAVNMNGYLMSGNMEELPTDSTTVFEQIKYNACLDQSLIKCIPITGKFHQIRIHLRNLGFP---------------------------
>UniRef50_C7G8E5(6-181:221) Ribosomal large subunit pseudouridine synthase family protein n=5 Tax=Clostridiales RepID=C7G8E5_9FIRM  E=3e-18 s/c=0.53 id=27% cov=52%
----------------------------------------------------------------------------RLDQPVEGIMVFAKNKEAAADLSRQIKTklADKYYYAMTDGVPEKKKGTLEDE--LLQNGKTNTSEVVERGTPQAKHASLSYEVVEQDGKHAVLRIKLDTGRHHQIRVQLAHAGMP---------------------------
>UniRef50_A5G5P6(63-239:296) Pseudouridine synthase n=2 Tax=Geobacter RepID=A5G5P6_GEOUR   E=4e-18 s/c=0.53 id=27% cov=24%
-----------------------------------------------------------------------LRPVNRLDRGTSGAVILAKSSMAAAMFgrLIMDEGLGKLYLALVEGELAEDGV-----------------------------------------------------------------------------------------------
>UniRef50_A7NF15(58-263:309) Pseudouridine synthase n=2 Tax=Roseiflexus RepID=A7NF15_ROSCS   E=4e-18 s/c=0.45 id=25% cov=76%
----------------------------------------LIALDKPIDTYVEATPWDAeghlRAALAHFLEVRDgsappLHLAHRLDRDTSGVLLLSKAPDVNAALqrAFREGAVRKTYLALCAGLPAFDEIEIETGHGRGRGGVFRVFPHEEIGRAlpqggTVKAMRTRLRVVRRMDDAALACATPLTGRTHQIRLHLAFLGHPL-------IGDVKYGG--PSTWR----
>UniRef50_D1J3S4(161-377:476) Whole genome shotgun sequence of line PN40024, scaffold_180.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1J3S4_VITVI  E=4e-18 s/c=0.43 id=22% cov=65%
----------------------------------------IIVVNKPPGLPVQGGIGIKRSldelaaTYLRYDCSEPPRLVHRLDRDSSGILIMGRTqtsatilhsifrektfGASNNDIDTKKRILQRRYWALVIGSPRRPRGlisAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSScHGYTWLELSPLTGRKHQLR------------------------------------
>UniRef50_Q0AFD5(86-296:354) Pseudouridine synthase n=3 Tax=Nitrosomonas RepID=Q0AFD5_NITEC   E=4e-18 s/c=0.44 id=24% cov=53%
----------------------------------------------------------------------------RLDRETSGVLLLARKRQTLLELHKQIREgtVRKHYLTLVRGKWKnslQNVRLPLYKYLTAEGERRVAIATGRNDHDKVQQAYTLFALQKNWEAFSLLDAELKTGRTHQIRVHLAHLGFP---------------------------
>UniRef50_D1N7N8(85-274:323) Pseudouridine synthase, RluA family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7N8_9BACT  E=4e-18 s/c=0.49 id=24% cov=52%
----------------------------------------------------------------------------RLDKDTSGCLAVAKTANAQFKLstAFAGRETRKTYLAITRGVPIRRSGELST---LIGRHPVSRQKMAVVER-NGKLAITRYRVEYTgmldGVEIGVLAVRILTGRTHQIRVHLASLGVPVL-------------------------
>UniRef50_C0GQU7(80-252:318) Pseudouridine synthase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQU7_9DELT  E=2e-17 s/c=0.53 id=22% cov=49%
----------------------------------------------------------------------------RLDKETSGLLLAAKNYAWLRRIqaMWNKNLVEKTYLAWVHGSWP-------SRWVNLEHRLIKTFE-KMQPSPEGRPALSRVRSIASSRDKTLVQIRIITGRTHQIRTQLSLSGHP---------------------------
>UniRef50_Q5Z213(7-190:260) Pseudouridine synthase n=2 Tax=Actinomycetales RepID=Q5Z213_NOCFA   E=2e-17 s/c=0.50 id=22% cov=55%
---------------------------------------------------------------------ERLFPVHRIDKVTSGLVLLAKDLAAHGTLTRQftKRTAEKAYLAVVAgGGLPDRGVIELplsvgrknrvriaapRESIRAEDGRWFVDDADLLAVKNY-PSRTEFVTLARTADRTVLALRPVTGRRHQIRVHLAWIGH----------------------------
>UniRef50_A7K2Y9(16-186:250) Pseudouridine synthase n=4 Tax=Vibrio RepID=A7K2Y9_VIBSE   E=2e-17 s/c=0.53 id=18% cov=56%
---------------------------------------------------------------------PEIQVVHRLDMSTSGLMLLAKNKPSERALkkQFQYRLTHKVYYARVWGHVEPQEGNIDLPLIcDWPNRPRQKVCFDDGKPSQTLFQVVKREVHSDGTHTTVVRLLPITGRSHQLRVHLMAIGH----------------------------
>UniRef50_A7ZDY2(48-209:252) Pseudouridine synthase n=4 Tax=Epsilonproteobacteria RepID=A7ZDY2_CAMC1  E=3e-17 s/c=0.56 id=31% cov=21%
----------------------------------------------------------------------------RLDKDTSGVLLLVKNDEFASLAIneFKKMKVEKIYVAAVRGIMSEE-------------------------------------------------------------------------------------------------
>UniRef50_Q1VZ16(47-254:292) Pseudouridine synthase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZ16_9FLAO  E=5e-17 s/c=0.43 id=25% cov=52%
------------------------------------------------------------KTSSEKDKLPYPQPVHRLDNPTSGLLIIAKTLSSKSYLsvLFEHNKVHKIYLAIVEGHF-----EGLSDIISLDI--------------DGKQSSTNYGVEKmfkiNQDEFSLLSLKPSSGRTHQLRIHLSKIGHP---------------------------
>UniRef50_D2VTC2(409-592:624) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VTC2_NAEGR   E=8e-17 s/c=0.48 id=21% cov=54%
----------------------------------------------------------------------------RLDRDTTGVLIVARNRagaiRMQQWLQESTVPLKKCYWAVTVGVPTPTTGRiKMVIDIQKDaNGVEKVVPVDNKTDSSKISVSEYKTIDHMTDKLAWVALYPVTGRKHQLRVHCAsALGAPIL-------------------------
>UniRef50_Q5HN86(75-250:274) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=61 Tax=Staphylococcus RepID=Q5HN86_STAEQ  E=2e-16 s/c=0.50 id=20% cov=55%
------------------------------------------------------------------VDSEYVEPIHRLDQETVGLLIVAKNPLMKKILdrMLEYNEITRIYKANVKALLPIK-----PQTIDMPIGKDKFHSNKRRISNTGQRAITHIINSKmIKEGVCQLDIKLDTGRTHQIRVHLAEIGHP---------------------------
>UniRef50_D1AMK0(51-251:285) Pseudouridine synthase, RluA family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMK0_SEBTE  E=2e-16 s/c=0.44 id=26% cov=51%
--------------------------------------------------------------------------ANRIDKETKGLLLGAKNLKFLRYLTEkiRNNELEKRYIAVVSGIITEDEF-------TIDNFlETKENKVVVSDKENGKAAKAVFKKIKTiKNKYTVLEVELITGRKHQIRVQLADMGFP---------------------------
>UniRef50_UPI0001891F1D(76-287:346) RNA pseudouridylate synthase domain containing 4 isoform b n=1 Tax=Homo sapiens RepID=UPI0001891F1D  E=3e-16 s/c=0.41 id=19% cov=39%
------------------------------------QDKNLVVINKPYGLPVHGG-PGVQLCITDVLPilakmlhghkAEPLHLCHRLDKETTGVMVLAWDKDMAHQVQelFRTRQVVKKYWAITVHVPMPSA------------------------------------------------------------------------------------------------
>UniRef50_B9XQ50(23-212:269) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XQ50_9BACT  E=5e-16 s/c=0.46 id=25% cov=50%
--------------------------------------------------------------------------AHRLDFETSGVILLAKDKPMLVAVAnlFGSEKPVKTYSALVQRSPEEKSFEV--------DAKLAPHPVKlgliRVDEKNGKRSRTQFELVEKFAGYSLLKCRPLSGRQHQIRVHLQYAGLP---------------------------
>UniRef50_A1SV26(66-250:303) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=A1SV26_PSYIN  E=6e-16 s/c=0.47 id=19% cov=53%
----------------------------------------------------------------------------RLDRVTAGLVMFSVNPDTRHryHQLFKTRQIHKSYQA-IASISDAENLTGQEWEIKNRIVQGEP-RFRMRVTEGEANSHSVIRCLRQSAQTALFELTPVTGKTHQLRVHMQALGLPIL-------------------------
>UniRef50_B8LC17(84-238:341) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC17_THAPS  E=1e-15 s/c=0.55 id=31% cov=24%
------------------------------------------------------------------VPLKRPQPVHRLDRPTSGLVVVAKTKLAAVHLSQQfeFRKAEKTYVAIVNGIP----------------------------------------------------------------------------------------------------
>UniRef50_C8PQG0(1-163:231) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQG0_9SPIO  E=6e-15 s/c=0.51 id=28% cov=53%
-------------------------------------------------------DTDGRVHLHSLSFKPG--PLHRLDKDTTGVLCFSRTLAGAQWFSQclREKTVGKYYLGVVRGAMPAQ-------------------PITAQDENGATMTQCYSVEYCKDIDASLMLFRLITGKKHQIRKHTESVGHP---------------------------
>UniRef50_A5K085(220-344:409) Putative uncharacterized protein n=4 Tax=Plasmodium RepID=A5K085_PLAVI  E=7e-14 s/c=0.64 id=21% cov=54%
-----------------------------------------------------------------------------LSASSEGLVLLTNDGDFARNLKDAHNNIITTYIIKVKEELTNEKIKLIERGCHVGDLHIRPLTVHVIKPNCASPK--------------WIKFTYVEKSHTHLDLLFSKYNLTIRKCKRFSFGPYKASDL----------
>UniRef50_C8RQ24(69-254:297) Pseudouridylate synthase n=2 Tax=Corynebacterium jeikeium RepID=C8RQ24_CORJE  E=7e-14 s/c=0.43 id=27% cov=56%
---------------------------------------------------------------------PELVAAHRLDRDTRGLLVLARNPVTRGFLqtQFQRREVSKTYQALAADIPeigsqwQDVQLPMLKikddpqvKVVDGERSRLTVTRIRKLASSAGAEAR-PVEATRAGTPTAVYELQPLTGYTHQLRVLMNHLGAP---------------------------
>UniRef50_Q313X0(93-252:305) Pseudouridylate synthases 23S RNA-specific-like n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q313X0_DESDG  E=1e-13 s/c=0.49 id=20% cov=54%
--------------------------------------------------------------------------VNRLDRPTSGMVLAAfgSHAAEAFRKFEQAGQVEKLYLAVVLGHMKAPVACRNELNMQNRQVTTvlPHEAQDPLRHTTVLPLRALPAESMDGQKTTLVLAAIHRGARHQIRAHLAHAGHP---------------------------
>UniRef50_Q7NQJ1(104-227:233) Pseudouridylate synthase n=1 Tax=Chromobacterium violaceum RepID=Q7NQJ1_CHRVO  E=4e-13 s/c=0.62 id=26% cov=55%
-------------------------------------------------------------------------AVGAVDERCHGLLVLTQDKKLPRHLA----ECEMEFLLQVEQAPAADALKARVAAIRLDGKPLRQCKISRQSDHQLRCAVYAPRAGFFAEISRQLGVSLQSARC-------------------IRIGRLALAGLQPGQWRYL--
>UniRef50_C2MA71(73-265:341) Ribosomal large subunit pseudouridine synthase family protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MA71_9PORP  E=1e-12 s/c=0.39 id=24% cov=29%
------------------------------------RDEQFIVLHKRPGIPTISVGGASKSSLFQVVthhlkkvdPNEKIFLLNRLDRDTEGIIIVARDRQLQQDL-----------------------------------------------------------------------------------------------------------------------
>UniRef50_B8CVD5(16-174:237) Pseudouridine synthase n=15 Tax=Shewanella RepID=B8CVD5_SHEPW   E=1e-12 s/c=0.47 id=32% cov=22%
-----------------------------------------------------------------------LYSVHRLDTMTSGLLILAKSSAVAAEFTRQfsEHKVQKYYLALAKGKP----------------------------------------------------------------------------------------------------
>UniRef50_C3XHK3(79-239:671) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHK3_9HELI  E=1e-11 s/c=0.45 id=29% cov=24%
-------------------------------------PPYFCVFNKPSKLLTHPKNLADSKSILDslrYYFGKHANPCHRLDYETSGLLV----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_D2R6S8(3-183:230) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6S8_9PLAN  E=3e-11 s/c=0.39 id=28% cov=22%
--------------------------------------------------------------------------VSRLDAHTSGVVVLARTSKAASRLAeqFREQGVEKTYWAAVEAAPEPA-------------------------------------------------------------------------------------------------
>UniRef50_C1N7S8(21-228:360) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7S8_9CHLO  E=6e-11 s/c=0.33 id=24% cov=53%
-------------------------------------------------------------------------AVHRLDLETSGVLMLAKDKPSASALqgAFERREARKTYLAVCA--ILEDAANASDESDDDFDFERHPghrrrerrRRAVHTRGDAGREAREHRFTGKRIVGTALVLARPLTGRTHQVRLHLAHAGLP---------------------------
>UniRef50_D0W8V5(35-154:246) Ribosomal small subunit pseudouridine synthase A n=1 Tax=Neisseria lactamica ATCC 23970 RepID=D0W8V5_NEILA  E=5e-10 s/c=0.55 id=32% cov=34%
-----------------------------------PEPYFYILLNKPTDYETSHK-PKHYRSIFSLFPDNmrniDMQAVGRLDADTTGVLLITNDGHLNHKLTSPNHKNPQT-------------------------------------------------------------------------------------------------------------
>UniRef50_C6PYN7(64-173:173) RNA-binding S4 domain protein (Fragment) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYN7_9CLOT  E=3e-06 s/c=0.49 id=29% cov=24%
----------------------------------------LIVVNKQPGMVVHPTKSYPNGTLANgllyYFKEKGeqciVRLVSRLDMDTSGLIIIAKN------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C7ICF2(47-228:235) Pseudouridine synthase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ICF2_9CLOT  E=2e-45 s/c=1.01 id=34% cov=75%
----------------------------------------YIMLNKPVGYVSTSKDQFGRPAVIDLVKDagKRLYPVGRLDYDTSGLILLTNDGDFTYRLTHPKHEVNKVYEAVISGFPDKNEITRFETGLKIDDYQTSPAEFEVLNKKGI---------------NTLVRITIHEGKNRQVRKMCEAIGHKVLTLKRIQIGPIALENLPEGKWRHLSD
>UniRef50_C9KIR7(54-236:250) Pseudouridine synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIR7_9FIRM  E=2e-44 s/c=0.98 id=39% cov=79%
--------------------------------------HVYLLLNKPKGYLSTAKDDRGRRTVLDLLPEvrERVYPVGRLDNNTEGLLLITNDGALMNGLLHPRFEVEKTYHAGVTGKLTEEKLQMLRDGLLLEDGMTAPAKVSLLPERE---------PGERVRGLTRAAITIHEGRNRQVRRMFAAVGCDVKSLKRVRFAGLTLKGVARGQHRALTE
>UniRef50_B1XK09(2-188:223) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XK09_SYNP2  E=2e-44 s/c=0.96 id=53% cov=82%
--------------------------------------HSYVLLHKPYNVLCQFTDnspqGSQRQTLKDFVPVPDIYSVGRLDLDSEGLLLLTNDAPLKHYLCEPKFAHSRTYWVQVENIPDGQALEQLRQGVMVQGKKTRPAIANLLTPEPTVPAREPPIRFRKNVPTAWLELTLTEGRNRQVRRMTAAVGHPTLRLMRVAIGagpaKLTLTGLGPGEWRHLT-
>UniRef50_D1CFA0(47-228:253) Pseudouridine synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFA0_THET1  E=7e-43 s/c=0.96 id=47% cov=77%
------------------------------------QPKmRYILLNKPAGVLSTAKDERGRKTVIDLLGQsNRVYPVGRLDKDSEGLMLLTNDGELAQRITHPRYGVHKQYMVEVEGYFSDRSLQDLLQGVELEDGFSKPLDAKIIS---------------RSRDKSKLLITMGEGRKRQVRRTLAALGYKVKRLTRVALGPLSLGNLKPGEYRELSD
>UniRef50_C7M7R0(191-377:387) Pseudouridine synthase n=4 Tax=Bacteroidetes RepID=C7M7R0_CAPOD   E=1e-42 s/c=0.94 id=33% cov=76%
--------------------------------------KEYILLNKPKGFITTTNDEKGRKTVMDLVANAtnvRILPVGRLDRATTGLLLLTNDGELTKKLTHPTHGVRKIYHVILDRKLDYKDFMKVQDGLELEDGLIEVDEISYVNDK----------------PKNEIGIKIHSGRNRIVRRIFEHLGYQVEKLDRVVFAGLTKKDLPRGHWRRLTQ
>UniRef50_B4U4Q4(67-252:266) Pseudouridine synthase n=15 Tax=Lactobacillales RepID=B4U4Q4_STREM   E=3e-42 s/c=0.93 id=33% cov=76%
----------------------------------------YYLLNKPRGVISSVSDDKGRQTVIDLLPQvkERIYPVGRLDWDTSGLLILTNDGDFTDKMIHPRNEIDKVYLARVKGVVTKESLRPLTRGVVIDGKKTKPARYRII-------------RVEPDKNRSIVELTIHEGRHHQVKKMFEAVGHLVDKLSRTQFGSLDVRGLKPGEARRLSK
>UniRef50_C6VXU0(360-545:555) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXU0_DYAFD  E=3e-42 s/c=0.93 id=36% cov=79%
------------------------------KKALNPEKMVYILINKPKDYITTTDDPEERKTVLDIIAgacSERVYPVGRLDRNTTGLLLLTNDGELAEKLTHPSSGIKKIYQAELDKPITTEDFEQLKAGVELEDGFIRPDEVGLVTPDAQ-----------------VVGLEIHSGRNRIVRRMFEHLGYEVQKLDRTVFAGLNKKDLPRGKWRFLTE
>UniRef50_UPI000196BAD7(42-226:247) hypothetical protein CATMIT_00510 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD7  E=5e-42 s/c=0.93 id=33% cov=75%
----------------------------------------YYLFYKPEKCVCTMSDEHDRTCVADYFADsnERVYPVGRLDYDTTGALFMTNDGEFANLIMHPSSHLEKVYEVSVKGLLTKAEKNQLEKGIYLEGVKTLPCEIAITGND-------------EEHGTTMLLIRLVEGKNRQIKKMFEEVGHPVKRLRRIMIGPIDLKGLTPGTYRRL--
>UniRef50_B9E1X9(70-233:245) Pseudouridine synthase n=39 Tax=Clostridium RepID=B9E1X9_CLOK1   E=1e-41 s/c=1.04 id=37% cov=75%
----------------------------------------YILLNKPRGYISSVKDDRGRKTLLDIVKVnERVYPIGRLDYNTSGAIILTNDGEVYNNIAHPGSNKSKIYIAAIKGIPSSEEIKRFENGIDIGGYITAKAKFDFISS---------------NKESSKVKIEIHEGKNRQVRKMCDAIGHPVITLMRIAIGDIKLGNLKEGAWRYLTE
>UniRef50_UPI0001BCEF2E(59-227:296) pseudouridine synthase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCEF2E  E=2e-40 s/c=0.99 id=38% cov=75%
----------------------------------------YILLNKPRGYLSTARDDRGRKTVLDLLPdfPARLYPVGRLDADTEGVLLITNDGAITQGLLHPRFEIDKVYHAEVAGPVTEGGLTRLRRGILLEDGMTASAKLRI---------------LRADKGYTVVETIIHEGRNRQVRRMFAAIGCRVCALRRVRFAMLTLRGLSCGSFRHLT-
>UniRef50_B9KY92(53-230:282) Pseudouridine synthase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY92_THERP  E=1e-39 s/c=0.93 id=40% cov=76%
------------------------------------EPRRYIVLHKPVGYITTTADEYGRKTVLDLVQVPeRVVPVGRLDRDSSGLLLLTNDGDLIYRITHPRYELEKEYEVLVDGFPPPEVEEALRRGVPVDGRPVRIRRLEAI---------------RVEPQGTVYRVVIHEGRNRIIRRVFERVGYPVLRLQRVRVGPLRLGDLPPGRWRDLT-
>UniRef50_A1WE21(188-399:520) Pseudouridine synthase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WE21_VEREI  E=2e-39 s/c=0.77 id=34% cov=83%
----------------------QFGDQVKVNGKPiryriDPPPARVIAYHKPVGEVVSHDDPHNRPTVFRRLPrlvQGKWQSVGRLDLNTEGLLLLTSSGELANQLMHPRFGLEREYAVRVLGALSNEEKQKLLDGVRLDDGIASFGTIEDGGGEGA---------------NCWYRVTIAEGRNREVRRMLEAVGHAVSRLIRIRYGAMVLPrGLKRGTWLELDE
>UniRef50_C4XSY8(34-238:322) Pseudouridine synthase n=11 Tax=Desulfovibrionales RepID=C4XSY8_DESMR  E=5e-39 s/c=0.80 id=38% cov=75%
-----------------------------------------LALHKKPGVVTTASDPEGRPTVFDGLPEvwrgKRLFPVGRLDFFSEGLLLLTTDGELALRLTHPRWHVPKRYRVTVRGQVTPDMLGTMARGMRLaEGERLAPVAARVVEGPA--------------QDRSILEMELHQGVNRQIRRMCRDLGLTVLRLARVSQGPVALGDLPLGACRELT-
>UniRef50_C7GZ55(40-241:250) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ55_9FIRM  E=6e-39 s/c=0.80 id=28% cov=83%
------------------------------------KKTVYIAMNKPCGYVCTVSDELGRRTVYDLLtdIDERLFTIGRLDKDSEGLILLTNDGDLAQKLLSPKRKIEKNYEVVVRGVPGANDIKKLSGGITIDVEISQTKQnkpVKSIVKYHTKPAKIFEIGQKQGDMK--LSMIIKEGKKRQIRKMFDVIGHEVIKLKRVKFAGIELGDLRPGEFRHLSE
>UniRef50_Q2S2G3(39-234:249) Pseudouridine synthase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2G3_SALRD  E=3e-37 s/c=0.80 id=35% cov=74%
----------------------------------------YLLLNKPKDTISTTDDPKDRRTVLDAIGVPednpsGLFPVGRLDRNTTGVLLVSNDGDLAHRLMHPRYEIPKIYYVRVQDDVKPHQLDQLKRGVELSDGAAAADQVAYLDP----------------QRKTDIALELHEGRNRQIRRMMEALGHTIVQLERAKYATLTTGRLQRGEWRRL--
>UniRef50_Q2NIZ3(41-228:245) Pseudouridine synthase n=5 Tax=Candidatus Phytoplasma RepID=Q2NIZ3_AYWBP  E=6e-37 s/c=0.83 id=31% cov=76%
----------------------------------------YFLLNKPNGFLSTAKDKKNRPTVLDLIEEasiQRLYPIGRLDFNTTGLLLITNDGDLTQKLTHPSFCIPKEYHVKINACLQKKDLSTFCKGIIIDKKYLAVCK-----------EIDILKISYMPKPSTWLKLVITEGKNRQVRKMMQALGYQVLKLKRYRYSFLTIENLTIGAYRPL--
>UniRef50_C6VP86(46-230:246) Pseudouridine synthase n=4 Tax=Lactobacillaceae RepID=C6VP86_LACPJ   E=9e-37 s/c=0.84 id=33% cov=76%
----------------------------------------YYVMNKPVGVITATTDSAA-KTVMDLFNttdfRDDLFPVGRLDKDTEGILVITNDGALSHDLLSPNHHVTKVYEAEVTGEITAAQLANFNDGITLKDGTEL------------QPAQAEIVQFHEIENFTTIRIMIHEGKYHQVKRMVGTLGERVVGLRRIKFGSLTLPvGLLAGNYRALTD
>UniRef50_P45104(124-306:357) Ribosomal large subunit pseudouridine synthase B n=177 Tax=Gammaproteobacteria RepID=RLUB_HAEIN  E=4e-36 s/c=0.84 id=36% cov=75%
---------------------------------------RVLMYYKPEGELCTRSDPEGRATVFDRLPRltgSRWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVRVFGQVDDAMLARLRKGVQLEDGLANFKEIKFTGG---------------VGINQWYDVTLMEGRNREVRRLWESQGIQVSRLIRIRYGNIKLmKGLPRGGWEEM--
>UniRef50_C7NDY8(37-219:228) Pseudouridine synthase n=5 Tax=Fusobacteriaceae RepID=C7NDY8_LEPBD   E=6e-36 s/c=0.83 id=33% cov=78%
------------------------------ERVKLNTRYEYYILNKPKRVLCSNEDKFGRRLAVDFIKSRaRLFTYGRLDFMTEGLIIISNDGEVYNHVMHPRKKLYKSYIAKVSREIEDKDIEALQHGVVIDGKRTAPAKVKKIDKKE-------------------LRIAIFEGRNRQIRKMLETLGYNVNSLKRIKVGELTLGNLQVGEYRALNE
>UniRef50_C0BLA3(138-324:334) Pseudouridine synthase n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BLA3_9BACT  E=1e-35 s/c=0.81 id=29% cov=77%
-----------------------------------PEKRAYILLNKPKDFDSSATDASQPKSALGLVAnatKSKIKPVGRLDKSASGLLLFTNDGELQTKLTKPKNGFRKIYHATLSKSLKADDLEKVRKGIVLEDGPVRVHEISNI----------------EGSPATEVGIEILSAKNNIIKRLFDHLGYELIKLDRVVYAGLTKKDLPRGQWRTLTE
>UniRef50_C1XV14(51-218:369) Pseudouridine synthase n=2 Tax=Meiothermus RepID=C1XV14_9DEIN   E=1e-35 s/c=0.90 id=38% cov=75%
-----------------------------------PEKKVVIALHKPVGVTTTKSDPHAERTVYQLVPDvPGLHPVGRLDKDSEGLLLLTNDGDLTLKLTHPRYGVRKVYRAWCkHGRVSEADCRRLVEGVALDDGLAQALEAEPTQEGA--------------------RIVMAEGKKREVRRMLGRLGYPVTRLVRLQVGPIKLGKLNPGEWRYLT-
>UniRef50_A9AXM1(45-225:728) Pseudouridine synthase n=3 Tax=Bacteria RepID=A9AXM1_HERA2   E=1e-35 s/c=0.83 id=40% cov=75%
----------------------------------------YVLLHKPSSVMTTLHDPEGRQTVADLVKSHnRLFPVGRLDYDSEGLLLLTDDGDLTFRLTHPSFEVEKEYQALLNQTPSVEQLREWRNGVELDDGKTAPAWIELLNE---------------TADGTWVRVVIHEGRNRQIRRVAEALGLEVRRLIRLREGPLTLGELQAGQWRALT-
>UniRef50_Q2W4E4(58-237:247) Pseudouridine synthase n=20 Tax=cellular organisms RepID=Q2W4E4_MAGSA  E=6e-35 s/c=0.83 id=40% cov=60%
---------------------------------------------------------------------PIVAPVGRLDRDSTGLLLLTDDGPLAHRITSPKRHVPKTYEVTLARPLSGEEGAVFASGtLMLRSESTPLAPAELVVSGPQTA-----------------RITITEGRYHQVKRMFAAVGNHVERLHRAAIGGLDLGDLAEGQWRPLS-
>UniRef50_Q1IJT7(47-249:680) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJT7_ACIBL  E=1e-34 s/c=0.73 id=35% cov=80%
----------------------------------------YVLLHKPKGYVTTVSDPEGRETVMDLVKgiPARLYPVGRLDYLSEGLLLLTNDGEMAAKLTHASTHVPKKYLVKVSGEPTEEQIQELRNGVQLppEQGHIHADPREGGRFGGEKRRSTAvktapcKIELTREGDNPWYEVTLNEGRNRQIRRMFDFIGHHVEKIKRVEYGPLKL-DVENGEFR----
>UniRef50_Q1RJR2(59-224:229) Uncharacterized RNA pseudouridine synthase RBE_0321 n=15 Tax=Rickettsia RepID=Y321_RICBR  E=1e-34 s/c=0.89 id=37% cov=76%
------------------------------------QKSRLWIYYKPVGLITTHKDPLSRKTVFEqLTGLPRVISIGRLDLNSEGLLLLTNNGDLARQFELPSSKLKRVYHVRAYGNPDP-LLKSNYKNLEIDGIFYNPQSIKL---------------LRKNSTNSWLEVILFEGKNREIRRIFEHFGLKVNKLIRTEYGDFKLDNLKPNEYREVTK
>UniRef50_Q2SRP5(29-231:252) Ribosomal large subunit pseudouridine synthase B n=3 Tax=Mollicutes RepID=Q2SRP5_MYCCT  E=2e-34 s/c=0.73 id=29% cov=78%
----------------------------------SNNQKYYYLFYKPRLVLTTMYDPKKRKTVADYFKDlnHRVYPVGRLDYDVSGLLIMTNDGELSNFIMHPKYEFLKTYQGLCQGQVNKQQVNQLIKGVYIDN------------NYLTKAYSSKLIKYDKLKNVSIVELTINEGKKHHVKKMFESIQAQLLKLKRTRIEFLEIDNLKPGQYREL--
>UniRef50_Q7MMX9(45-224:347) Pseudouridine synthase n=43 Tax=Vibrionaceae RepID=Q7MMX9_VIBVY   E=3e-34 s/c=0.82 id=32% cov=73%
----------------------------------------YIALNKPTGITCTTERNIP-GNIVDFIGhKKRIFPIGRLDKPSDGLIFLTNDGDIVNKILRAGNHHEKEYVVRVDKPITPEFIKAMSSGVNILDTVTLPCKVTQETKFS-------------------FRIVLTQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLTD
>UniRef50_C7LZX4(49-223:254) Pseudouridine synthase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZX4_ACIFD  E=4e-34 s/c=0.84 id=37% cov=71%
------------------------------------------LLNKPRGVVSSVVDPEGRPTVRSLVAtTSRVYPVGRLDVDSEGLLILTNDGPLTYQLTHPRFHVPKEYLVWVDRPVPRRLGRELREGVEVDGELLRASSVGTVGPR-------------------LVRIVLTEGRNRQIRRMVGAVGLSVERLVRVRIGPLVDPHLPPGVARRL--
>UniRef50_UPI0001C337CA(27-236:254) ribosomal large subunit pseudouridine synthase B n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C337CA  E=5e-34 s/c=0.70 id=39% cov=75%
----------------------------------------YILVNKPVGIICSCKDSQNRSIVMDLLPSNlrkgmGIHPVGRLDMNSSGALLLTNDGNLTLRLTHPRYHLPKIYEVLVRGNFTQAILKDWRQGVVLDGKKTLPAYLEVIN---------------NNRQYTNLKIILTEGKNRHIRRIAQKFELDVIKLHRTAIGPISLstskvDNVKLGHYRLLS-
>UniRef50_UPI00006CCA31(218-401:484) conserved hypothetical protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CCA31  E=1e-33 s/c=0.79 id=30% cov=79%
-------------------------TQRGEKFAPVKQNAKIWIFYKPRGMICSHDDPLKRPSVFNYiynntkIKEPHIIAVGRLDYNSEGLILLTNDGDIAQCLEQPESNIYRQYRVRVQGELDERKLLKLRQGTVINGVQYGPFNVEI---------------DKRQSSNTWLTVGLYTGKNREIRKVMQKFDLRVSRLKRLSYGPYKIGSMLPGQ------
>UniRef50_Q1Q1Q0(57-227:260) Pseudouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1Q0_9BACT  E=1e-33 s/c=0.85 id=34% cov=75%
----------------------------------------YYLLNKPKDCLCTNYDELNRLRAIDIIKnvKQRLYTIGRLDKQSEGLIIITNDGELSNKLSHPKYEVNKTYFIEIDGYLSNETITALQSGVWLAFGKTQPVRIKKM---------------HRSFKKSRFEMILCEGKNREIRRMLADHGHKVRTLRRIKIGSLCDPDLKVGKYRKLTE
>UniRef50_B2IHU4(124-315:528) Pseudouridine synthase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IHU4_BEII9  E=2e-33 s/c=0.75 id=35% cov=75%
--------------------------------------TRLFLFHKPRGLVTTNHDPEGRPTVFDYLherhpDMPRVLSIGRLDINTEGLLLLTNDGGLSRLLELPTTGWVRRYRVRAKGTTDQAVLDQLRQGITIDGIHYAGMEVTF---------------DREQGANSWLTLSLREGKNREVKRVLEQIGLEVNRLIRLSFGPFQLGDLPEGDVTEV--
>UniRef50_C8P160(69-248:262) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P160_ERYRH  E=2e-33 s/c=0.80 id=30% cov=75%
----------------------------------------YIALNKPRGITCT-TDGAIEGNISDFMNYPKmIFPIGRLDKDSSGLILLTNDGDIVNKILREEYGHDKEYIVSVNKTIDEDFITKMSKGVEIYNQQTHRMQVTNPSDVEQVAPKT-------------FRIVLNQGLNRQIRRMTKALGFKVTTLNRVRIMNINLGDLKVGEWRYLS-
>UniRef50_C6HYA4(54-250:638) Pseudouridine synthase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYA4_9BACT  E=3e-33 s/c=0.73 id=37% cov=78%
---------------------------------PREPETFLFLFYKPKGVVSTLFDPEGRPTLRDYFPgIDPLLHIGRLDFQTEGALLLTNNGDLSQRILHPRFEIPRTYLVKIQGGMSPAHLERMARGeIRLDGRPVVPLEL---------------VPERQTSTNAWYRITLTEGRNREVRRLFETLNYFVLKLVRTAFGPLTLAGLEPGEYRTVT-
>UniRef50_Q13UY7(77-252:261) Pseudouridine synthase n=45 Tax=root RepID=Q13UY7_BURXL   E=5e-33 s/c=0.81 id=29% cov=76%
------------------------------------REHAYLLLNKPAGYECSR-DPQHHLSVFSLLPPqfagRGVQCVGRLDQDTTGLLLLSDDGKFVHLFTSPKRKVPKVYVATTRHPIDDAQLSALRDGVLLNGEARPIAAVDV----------------EARGDHTL-ALTVMEGKYHQVKRMIAAAGNRCEALHRERIGGLALPEaLARGAWQWLDE
>UniRef50_A1K3P0(301-496:500) Pseudouridylate synthase n=3 Tax=Betaproteobacteria RepID=A1K3P0_AZOSB  E=7e-33 s/c=0.72 id=38% cov=76%
---------------------------------KKAQAQRVtILLHKPVGYVSgqpepgyepavtlIGGDNQFDRDVAQRFHPsqlKGLAPAGRLDIDSTGLLVLTQDGRIARQLIGDDSKVEKEYLVRVEGELVDDGLALLNHGLSLDDKPLRPAKVEWINEDQ-------------------LRFVLKEGRKRQIRRMCELVGLRVVGLKRVRIGRVKLGDLPLGEWRYLRD
>UniRef50_C0D9T3(92-261:300) Pseudouridine synthase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9T3_9CLOT  E=7e-33 s/c=0.84 id=33% cov=76%
------------------------------RSMKKPRP-VLLAVNKPKGVVCTASDKDKAPNIVDMIQYPvRVYYVGRLDKDSEGLVLMTNQGDLVNKIMRSGNAHEKEYQVVVDRPVTAEFLARMEKGVRLKelDRTTLPCKVRKTGDK-------------------RFSIVLTQGLNRQIRRMCEACGCHVRSLKRVRVMNICLGDLKSGEYRQV--
>UniRef50_C1D9V0(50-223:231) Pseudouridine synthase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9V0_LARHH  E=8e-33 s/c=0.82 id=38% cov=60%
----------------------------------------------------------------------GVQPVGRLDADTSGLLLLSDDGQFIHRITSPKHLVPKTYVATCARPVEPEHLRQLLAGVVLNDDPAPVVA-----------------RSARTLDEHTLELVVTEGRYHQVRRMIAAVGNHCDALHRSRIGELVLDGLAPGQWRELT-
>UniRef50_Q1LJQ9(52-226:238) Pseudouridine synthase n=3 Tax=Burkholderiales RepID=Q1LJQ9_RALME   E=2e-32 s/c=0.81 id=38% cov=73%
----------------------------------------YVMLNKPTGYECS-QRPRHHPSVYNLLPVPlrqrEVQAVGRLDHDTTGLLLLTDDGQFIHAQTSPKKQVPKIYEVTTFDPVTPEQVEALRTGVKLDDEPA-PIAADACEATGERS----------------LRLTLLQGKYHQVKRMVAAVGNHVTALHRSAIGGLVLDPaLGPGEWRWLT-
>UniRef50_C6XHY6(38-238:354) Pseudouridine synthase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHY6_LIBAP  E=2e-32 s/c=0.70 id=32% cov=76%
--------------------------------------TRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSifSRVISVGRLDINTEGLLLLTNDGGLARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGS---------------NAWVTVGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSK
>UniRef50_Q30U38(29-237:312) Pseudouridine synthase n=12 Tax=Epsilonproteobacteria RepID=Q30U38_SULDN  E=3e-32 s/c=0.67 id=30% cov=80%
----------------------------------------VIVYNKPKGELVTKSDPKERKTIYDTLPKEYKHyvPVGRLDYASEGLLLLTDASKVASALM--ESNLERIYKIKIKGEVTSEMEAAMLNGMMLDDATAGGHSHSKVTSMEFKPFI-GYKIQKNEPNYSILKVALSEGKNRELRRFFAHFGTDIVDLKRVSFAEIELNNLPTGKVRFLS-
>UniRef50_A6LUE3(25-269:281) Pseudouridine synthase n=3 Tax=Clostridium RepID=A6LUE3_CLOB8   E=3e-32 s/c=0.57 id=24% cov=82%
----------------------------------------YIVLNKPVGITCTAENKVSDNIISYMKYPHYIFPVGRLDKDSQGLILMTNDGEVANRILESDNMHEKEYLVQVNKNFDDEFLKRMSNGVEITGNKSSGVRrisdklglykkiedkeillgeedpgdssivqlkeLKNIEREQNKFVKTRPCQVERVDDNT-FKIILTQGMNKQIRKMSGALGYKVIKLERIRIMNIKLNDLETGKWRYLEE
>UniRef50_B8ETE9(80-250:676) Pseudouridine synthase n=1 Tax=Methylocella silvestris BL2 RepID=B8ETE9_METSB  E=7e-32 s/c=0.81 id=34% cov=75%
--------------------------------------TRLFLFHKPRGLVTTEHDPEGRPTVFDYVrehspEAPRLVSIGRLDINTEGLLLLTNDGGLARVLELPATGWARRYRVRAKGSIDQPTLDRLRQGVTVEG---------------VDYAQIEATLDRIQGANCWLTMSLREGKNREIKRVLEHLGLEVNRLIRLSYGPFQLADLEEGKVEEV--
>UniRef50_C9RMB6(69-284:286) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMB6_FIBSS  E=1e-31 s/c=0.64 id=35% cov=77%
----------------------------------------YFMMNKPRGYVTTASDEKGRATVMDLFreqyakmfpgkPVPHISPVGRLDAASEGLLLFTNDTQWADALLKTKDErrktrddkcveresrgpiHTKIYRVQVNGHPTAEELSQMEAGFNVPP--------RVFGEPEEFMHAVSAKLYSAGEKNCWLEITLDEGKNREIRRMLAKLGYEVLRLVRIKFCNYELGDLKQGEIRKI--
>UniRef50_B3E104(39-231:256) Pseudouridine synthase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E104_METI4  E=3e-31 s/c=0.71 id=31% cov=76%
-----------------------------------PQQKQYFLFYKPRGIVCSRKDPFGGKTIYDLLPSslHHLFSVGRLDKDSEGLLLLTNDGLLANAVLHPRYHFAKTYIVTLCPSFEEKHQKDLLKGMYIEGKRAKADKVIIENKNT-------------------LKIVLSQGMKRQIRTMLSLLGYKVNRLRRVALGPLTLKRMKPGELRSLTE
>UniRef50_D0SE82(49-226:244) Pseudouridine synthase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SE82_ACIJO  E=2e-30 s/c=0.75 id=32% cov=58%
----------------------------------------------------------------------GIQCVGRLDQDTTGLLLLTDDGQFLQALTHPKKHVAKVYRMKTADPVTDEQVQQLEQGVELRNEK-------------GSFAATDVKRLAE----CELQMTVHQGVYHQVKRMLAAVGNKVESLHRQQIGALDLTGIPdlvEGHW-----
>UniRef50_A8SIK9(34-226:235) Pseudouridine synthase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIK9_9FIRM  E=2e-30 s/c=0.69 id=32% cov=72%
----------------------------------------YLMLNKPKDFISATFDTK-LPTVLDLLEFPysnmELFPVGRLDIDTTGFLILTNDGKFSYNVTNPKKKVNKKYFVTLRDEIISEQIEKLENGIYFekEDFTTENAKVEKISEKE-------------------INLTISEGKFHQVKRMLEYVENEVVELKKVCIGNLNLDDsLKLGEYREIT-
>UniRef50_Q0VQK2(44-235:248) Pseudouridine synthase n=2 Tax=Alcanivorax RepID=Q0VQK2_ALCBS   E=4e-30 s/c=0.69 id=34% cov=73%
---------------------------------------RYLMINKPAGVVSATRDEH-HPTVLELLPrgqREGLHLAGRLDFNSTGLVLLTNDGAWSRRLSLPETGLWKHYRVSVDKPLSDEDVVSFSQRMwfDFEQIYTQPARLTIRSSFEA-------------------DVWLHEGKYHQIKRMFGRTGKKVTALHRLAVGRIQLDAyLAPGESRELTQ
>UniRef50_UPI0001745DB4(31-200:345) ribosomal large subunit pseudouridine synthase B n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DB4  E=5e-30 s/c=0.78 id=31% cov=73%
----------------------------------------VIVLHKPRGLVCSRRDERDRDTIYSLLPEkfHTLHHVGRLDKESEGLLLMTNRGEVSQRLLHPSQGVEKEYEVILETRFDPENLTRLTKGFHTEDGYAKAERAWMIGDYK-------------------IGMVLKQGLKRQIRMMLYFLGYEVKRLVRVRIGNLAIKGILEGNWKELSD
>UniRef50_C1FHS6(63-234:248) Predicted protein (Fragment) n=4 Tax=Mamiellales RepID=C1FHS6_9CHLO   E=1e-29 s/c=0.77 id=38% cov=65%
-----------------------------------------------------------------------VFPVGRLDRDSSGLVLLTDDGRVPEALLDPSRKAPKTYEVDVRPAPTPDAIEALRDGVVI-----TTTQQRDGVTTTSPTAPCPVDLIKKSETSATLRFELREGRNRQIRKMCEAVGVEVVRLHRVSVGGVWLDEsaLEVGGVRALS-
>UniRef50_Q73PC4(52-225:234) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73PC4_TREDE  E=1e-29 s/c=0.75 id=28% cov=74%
--------------------------------------KRYILLNKPEGYVCSLADEKDRPIAASLLKDtytERLYNIGRLDMLSGGAILFTNDGDFSAKVEHPSSEIEKEYEVITVFEYPDEILQKFLRGVRIEGVFYKALSAERISKNK-------------------MRIVLIEGKNREIRRVLKFFNIKIKKLTRVRIGCVYLADLPSGKHRPLT-
>UniRef50_Q688C2(21-222:235) Pseudouridine synthase n=1 Tax=Mycoplasma mobile RepID=Q688C2_MYCMO   E=1e-29 s/c=0.65 id=24% cov=72%
----------------------------------------YYLLNKPKNVVTTLKDNFNRSIITDFIDEKkyKIFPVGRLDYDTTGIIILTNDGETANKLLHPKYEIPRIYEVIIDKELSLEEIKYLNSQEVFLNSKKSFQEVSKISNYKYK-------------------IKLHQGSYHHIKKLFEIVGKKVKDLNRTEYAFFNLENLSIGNYRKL--
>UniRef50_Q4A5Z2(58-226:234) Pseudouridine synthase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5Z2_MYCS5  E=2e-29 s/c=0.77 id=34% cov=57%
---------------------------------------------------------------------------GRLDIDTEGLLIITNDGKLSHNLLSPKKHIPKTYYVELDKPLEKNIKELLEKELLIDEIKYKKSILNNISNNKW-------------------EITIFEGKFHQIKIIFAHFGYKVTYLKRIKMNNLSLDeNLKPGEYKFLTK
>UniRef50_D0J8G4(431-636:642) Pseudouridine synthase, Rsu n=96 Tax=Bacteria RepID=D0J8G4_COMTE   E=6e-29 s/c=0.63 id=35% cov=77%
------------------------------QKAQERQDQQVtILLNKPMGYVSgQAEDGHEpavvlitnenrwnedrSKTRFNFSQLKGLAPCGRLDIDSVGLLVLTQDGRVARQIIGEDSEVDKEYLVRvtfgdrdvdVQSVFPEEKLALLRHGLSLDEQPLKPAQVDWQNPEQ-------------------LRFVLTEGKKRQIRRMCEQVGLKVVGLKRIRIGGVTLGNLPTGQWRYL--
>UniRef50_C5CED2(19-223:235) Pseudouridine synthase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CED2_KOSOT  E=7e-29 s/c=0.63 id=31% cov=73%
----------------------------------------YIAMNKPVGYVCSKSRTEGL-SVYDLINEvfsSKLSIAGRLDKNSRGLLLLSNDGNFVHEIISPRKKIEKEYIVKVEEKILPEQLQILLQHVDIGKGEYARAE------------------SVQFIDIVTFSIVLTEGKYHEIRRMVKsALKNNVVDLKRIRIGGYHLpGDLHEGEWRILTE
>UniRef50_A1TM39(70-244:253) Pseudouridine synthase n=3 Tax=Comamonadaceae RepID=A1TM39_ACIAC   E=2e-28 s/c=0.73 id=34% cov=60%
----------------------------------------------------------------------GVQTIGRLDQDTTGLLLLSDDGSFIHRVSSPKKQIQKTYRVHAKYDLSQQQKDQLLKGVVLNDDPKPVIAVDCVLQEGP-----------------VFDLTVTEGKYHQIKRMVAAVGNRVEQLHRIRIGGLHLpDDLQAGDWRWLRE
>UniRef50_B8CBS5(38-235:253) Pseudouridylate synthase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBS5_THAPS  E=3e-28 s/c=0.64 id=30% cov=80%
-----------------------------ANSESSTQVFEYIKYWKPLGVTCT-TDRRIYDNLIDALqqdgcrPKSRIFPVGRLDKETSGIILMTSDGRLPNAALRGKYKHPKTYVVKANRPVANDDIKRLREGVPLT-APTLPCKVKAV------------QLSTLDLSSRYLEITLVEGRNRQIRKMLEAIGYRVMELHRKSFMNLTLENLEgEGDWAHLT-
>UniRef50_UPI00016B2405(75-232:237) pseudouridine synthase n=6 Tax=candidate division TM7 RepID=UPI00016B2405  E=4e-28 s/c=0.80 id=31% cov=72%
----------------------------------------YLMLNKPINYVCSRKQQGKTPTIYSLLPDkfHNLKPVGRLDANSSGLLLLTNDGDFAFRMTHPKFKKNKQYNVTLDKELAPLHQQMIADfGIQLNDGL----------------SKLGLSRQSNQDRHNWI-VTMSEGRNRQIRRTFAALGYTVIKLHRTHFGTYKLGTLGAGDY-----
>UniRef50_B8BQ39(161-358:370) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ39_THAPS  E=8e-28 s/c=0.63 id=32% cov=68%
----------------------------------------------------------------------GMHPVGRLDYDTTGLILFSSDGKLTQRLLHPRRGVEKEYVATVQGEVNASELrEMLANGVETTDGTFAANLIAVTSSNGPSEVSEedlnnvpeedeggdETTDEPYNGPYSDVRLVVSEGKYRMVRRILANSGHPVVELRRERHGEILLDDLPVGKFRDVT-
>UniRef50_C9KIU1(52-247:296) Pseudouridine synthase n=3 Tax=Veillonellaceae RepID=C9KIU1_9FIRM   E=2e-27 s/c=0.63 id=23% cov=81%
------------RTEVRTGDIITFDIVRPSDIEPEDlpldiryEDDYLLIVNKPAGQLVHPTTKEAHGTLGNAVlywykahgEHHAYHPVHRLDRNTSGLVLIAKVPQVQYKLTPRHGEgklFHREYLALIEGELTPPEG-----LIDAPIARALPSIILRKVSPDGQTARTHYDTVQTDGKLSLIHLVLDTGRTHQIRVHLAHLGHPLL-------------------------
>UniRef50_D2BIX0(81-250:302) Pseudouridine synthase n=5 Tax=Dehalococcoides RepID=D2BIX0_DEHSV   E=2e-26 s/c=0.71 id=23% cov=56%
----------------------------------------------------------------DFDDPLRPGIVHRLDKDTSGLLLVAKNRETLANLsaQFKERTVRKYYLTLVKGELHPAEGF-----IEAPLGRDPQNRQKIAVVSNGRHARTGYKVLRYIQGYSLLEVKLETGRTHQIRVHFAAIGHP---------------------------
>UniRef50_Q2NIN6(54-250:306) Pseudouridine synthase n=4 Tax=Candidatus Phytoplasma RepID=Q2NIN6_AYWBP  E=5e-26 s/c=0.60 id=28% cov=23%
------------------------------------------------------------------IDTQRPGIVHRLDKNTTGLLIVAKTNDVSDKLQiaFQQRKITKIYWALIEG------------------------------------------------------------------------------------------------------
>UniRef50_Q3IDR5(24-219:229) Pseudouridine synthase n=3 Tax=Alteromonadales RepID=Q3IDR5_PSEHT   E=1e-25 s/c=0.60 id=32% cov=71%
----------------------------------------YFAYHKPVGIDC-KLDQNDPASLYHHLPTiTRVYPIGRLDKDSRGLLILTNDGELCNQLIHPDFHQPKRYLVSVNKSIDAEFCTKMAAGVPVDKQITLPCSVEKIADKQ-------------------FSIILKQGLNRQIRKMAHYCGYKVIDLYREQISELTLQtlNLAQGQY-----
>UniRef50_A8ZXZ8(38-253:329) Pseudouridine synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXZ8_DESOH  E=2e-25 s/c=0.54 id=22% cov=63%
----------------------------------------LLVVNKPPGLVVHPAPGHEGGTLVNRLlhhfpaigtvgEPDRPGIVHRLDRNTSGALVVAKTAAAHQALsdMFKSRQVRKTYLALVYGQMKSTGGV-----VTLPIGRHSLERKKMsVSSPQARPAETRWKVRKAFVDASLLELEIHTGRTHQIR------------------------------------
>UniRef50_C0ZH07(83-263:306) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZH07_BREBN  E=2e-24 s/c=0.64 id=21% cov=53%
------------------------------------------------------------------------RAVNRLDKDTSGLMIVAKNQWAHEQFsrMQQIRTLQRTYRAIVQGIVESDDGT-----INTPIGLAENSFITRQVRPDGQTAVTHYRVLARGEGMSFVEVKLETGRTHQIRVHMSSEGHP---------------------------
>UniRef50_D2RJW8(76-237:285) Pseudouridine synthase, RluA family n=2 Tax=Acidaminococcus RepID=D2RJW8_ACIFE  E=3e-24 s/c=0.70 id=25% cov=53%
-----------------------------------------------------------------------VHPVSRLDRETSGVVLFAKNACLHHMLS--RNRLEKTYLALTLGHWEQPAGI-----LDWPIGRRPGSIVERQVDPDGQPARTRYQVLGEKEGLSLVRFQLETGRTHQIRVHAAAAGHPLL-------------------------
>UniRef50_A6NQQ9(86-251:300) Pseudouridine synthase n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQQ9_9BACE  E=5e-24 s/c=0.68 id=23% cov=53%
------------------------------------------------------------------------HPVHRLDRGTSGLLLVALHGHAQEVLKEQLHspSFRRVYLAVCEGAPNPPSGV-----IDAPIGRLEGSVLARTVRPDGQRAVTHYRTLRTVNDRALVRLELETGRTHQIRVHMAHLGHP---------------------------
>UniRef50_C1TRW2(83-257:305) Pseudouridine synthase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRW2_9BACT  E=8e-24 s/c=0.64 id=22% cov=52%
--------------------------------------------------------------------------VNRLDRNTSGIMVLALTGESLRDLSSRWRdgEMEKVYLALVVGDLPEEG--SIDAPLSKDG-----SSNKVFVDSKGQSSLTLYRRLASGGGLSLCLVTLITGRSHQIRVHMSHIGHPVL-------------------------
>UniRef50_Q83G23(77-262:303) Pseudouridine synthase n=2 Tax=Tropheryma whipplei RepID=Q83G23_TROWT  E=4e-23 s/c=0.59 id=19% cov=56%
----------------------------------------------------------------------------RLDANTSGLMVLAKSDLAYHNLkaAFRDRAIHKRYKALVQGYPDPSSGV-----INAPIGRDLKHRDRFCIDYSGRDAVTQYSTEEVYPGFTLLSVAPKTGRTHQIRVHFSALRHPLVGDVKYGADPV---------------
>UniRef50_C2ELY9(90-262:310) Pseudouridine synthase n=10 Tax=Lactobacillus RepID=C2ELY9_9LACO   E=6e-22 s/c=0.61 id=25% cov=51%
----------------------------------------------------------------------------RLDRDTSGLVLVGKNAIAHARFSKiGKEKFVKKYHAIVHGNFSEDKLT----GVIDAPIGKKGSGVKRAVVEGGKKAQTKYRVLKQVSGASLVELRLLTGRTHQIRVHMAYLGHP---------------------------
>UniRef50_C7LQ47(60-251:281) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQ47_DESBD  E=6e-22 s/c=0.55 id=26% cov=72%
------------------------------------KAKHYSVWNKPAAVLSQGTRFADHCTLPRLAQAKlgsrnELHPVHRLDREARGIMLLAHDGKAAAKLgeLFRQGAVVKEYAAIVRGIPDWTDIEVNE---PLDGKEAR--------------SRFHVVQSDPASDMTLLLARIDTGRKHQIRRHLNGLGHPVMGDPRYGRGTRQVQELQ---------
>UniRef50_D2LES8(88-271:326) Pseudouridine synthase, RluA family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LES8_RHOVA  E=8e-22 s/c=0.57 id=22% cov=54%
----------------------------------------------------------------------------RLDRDTTGILAVAKDRQTAARLgrLFQTRSVQKIYWAITRGIPKPTQGKVEAALVKASGpDGDRVRKARPGEQELAQHATTFYSVIDRAANMAWVSLKPVTGRQHQLRAHMDILGTPIL-------------------------
>UniRef50_O50310(79-265:327) Uncharacterized RNA pseudouridine synthase Cpar_0723 n=13 Tax=Chlorobiaceae RepID=Y723_CHLP8  E=1e-21 s/c=0.56 id=22% cov=52%
----------------------------------------------------------------------------RLDKDTSGLIIIAKNPTALHKLarQFANRQVEKVYKAIVWGVPKAESGT-----IKTNIGRSHKNRKVMAnfpyEGAEGKHAITDYQVVEDLGYFSLMDVTLHTGRTHQIRVHLQHLGHSIL-------------------------
>UniRef50_Q8IZ73(199-386:545) RNA pseudouridylate synthase domain-containing protein 2 n=20 Tax=Euteleostomi RepID=RUSD2_HUMAN  E=2e-21 s/c=0.55 id=25% cov=24%
-----------------------------------------------------------------------LHPLHRLDRLTSGVLMFAKTAAVSERIHEQvrDRQLEKEYVCRVEGEFPTEEV-----------------------------------------------------------------------------------------------
>UniRef50_Q12362(163-343:591) Diaminohydroxyphosphoribosylaminopyrimidine deaminase n=25 Tax=Saccharomycetales RepID=RIB2_YEAST  E=3e-21 s/c=0.57 id=21% cov=55%
-----------------------------------------------------------------------VHPCNRLDKPTSGLMFLAKTPLGADRMgdQMKAREVTKEYVARVKGEFPIGIVEV-DKPVRSVNPKVALNAVCEMSDENAKHAKTVFQRVSYDGQTSIVKCKPLTGRTHQIRVHLQYLGFP---------------------------
>UniRef50_Q03TY5(50-249:295) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03TY5_LACBA  E=8e-21 s/c=0.51 id=22% cov=55%
-------------------------------------------------------------------DQPGPYILSRLDQETTGALLMTKTPAVVPIMvrHIADKQVQRTYLAWVHGRLTGDGVFTDPIGRDPLDKRK-----RQVNGDHAQPAVTHYHVCEYREQATLIQLRLETGRTHQLRVHLAAAGHP---------------------------
>UniRef50_C1FD45(147-323:334) Pseudouridylate synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1FD45_9CHLO  E=2e-20 s/c=0.57 id=34% cov=56%
---------------------------------------------------------------------------GRLDKNSRGLLVLSQDGVLAREVIAGVF-VSKTYLVEVDKMVTQNDLDRLNGPCKFLTDVIRPIRVRLLAP-------------------TLLEFVLREGKNRQIRRMCEQMGLIVVDLFRVRLGKSELGSLPEGSWRTM--
>UniRef50_B8GX34(85-274:331) Pseudouridine synthase n=7 Tax=Caulobacteraceae RepID=B8GX34_CAUCN   E=2e-20 s/c=0.53 id=28% cov=53%
----------------------------------------------------------------------------RLDRDTSGVLLLGKTPSAAARLsgAFAKRKAQKTYWAIVAGNPHPTegvmELHLAKRGV---GDRELVVPAQPKDPDAQPAETEFVTISRAGPRVTWMALRPHTGRTHQLRAHMKAMGHPIL-------------------------
>UniRef50_D0LU78(114-292:369) Pseudouridine synthase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU78_HALO1  E=2e-20 s/c=0.56 id=26% cov=52%
----------------------------------------------------------------------------RLDRETSGALVVARGKPEAARLkgAFADKRAHKTYLALVWGDPPwpdgawdsapeDDAIIDLPLGLVADE--SARIKIRMEVRAGALPSLTRVRVLERRGRAALVRCLPLTGRQHQIRAHLAACGHP---------------------------
>UniRef50_O31613(68-248:283) Uncharacterized RNA pseudouridine synthase yjbO n=53 Tax=Bacillaceae RepID=YJBO_BACSU  E=3e-20 s/c=0.55 id=21% cov=53%
-----------------------------------------------------------------------VHLVTRLDRDTSGIMLVAKHRFAHSILSSAQKNglVKRRYAAVVHGRMAQ-----MEGTVDAPIGRHPDSIIERTVTPDGQKAVTHFYVTCANDDMTSVALQLETGRTHQIRVHMSYLGHP---------------------------
>UniRef50_Q6MGX8(52-254:319) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGX8_BDEBA  E=6e-20 s/c=0.49 id=21% cov=70%
----------------------------------------LIVINKPAGLVVHPAAGHAHDTLVNALihhtddlsmkfGEERPGIVHRLDKETSGIIVIAKNDKAHESLTsqFKERSTHRIYYAVCLGTARtlSGSVRSFLARHPVDRKRYasvLGDDRKPLTDPNddpglGKWAVTHFEVLQRKSGMSYLKLKLETGRTHQIRVHMSESGLP---------------------------
>UniRef50_Q38Y05(59-251:296) Pseudouridine synthase, 23S-rRNA-specific n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38Y05_LACSS  E=1e-19 s/c=0.51 id=21% cov=68%
----------------------------------------LLIVNKPAGIKTHPNRPGENGTLMNQVAFylaqqgKKAYMVHRIDEATSGTLLIGKTPIVIGILNRQlsQKKMARQYIAIVDDPkheLAEHATINSPIGVDPEN-----DRQRCVDYINGLSAITHYRVLSRKGATAVLAVDLETGRTHQIRVHLASIGHPIL-------------------------
>UniRef50_D1VZE9(60-264:315) Pseudouridine synthase, RluA family n=2 Tax=Prevotella RepID=D1VZE9_9BACT  E=1e-19 s/c=0.48 id=21% cov=53%
------------------------------------------------------------------------HVVHRLDRDTSGLMIYAKDIQTAQLLEHDWHHnvYDRRYVAVVSGEMEQDEGTIAN---WLKDNRAY-ITYSSPEDNGGKFAVTHFHTLNRTTEHSLVEYRLETGRKNQIRVHSADMGHP---------------------------
>UniRef50_Q1UZE2(86-253:304) Pseudouridine synthase n=3 Tax=Candidatus Pelagibacter RepID=Q1UZE2_PELUB  E=2e-19 s/c=0.58 id=25% cov=50%
------------------------------------------------------------------------FSVHRLDKDTSGVFIMAKHRQSAQLLTslFRLRKVHKTYLAICHGELQKDSGEW-------NDDLTRYDNDREVVEK----ARTLYKVLDKNSICSLVEMKPITGRKHQLRKQLYAVGCP---------------------------
>UniRef50_A1U2H1(9-180:245) Pseudouridine synthase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2H1_MARAV  E=2e-19 s/c=0.57 id=20% cov=56%
---------------------------------------------------------------------EHVYPVHRLDRPTSGVLLFARDPETARalGLAMMAGAVSKTYLAMVRGWAPEQGVIDHPLREEPEDRRLKGQEQpvrEALTRYRRLATTELPVAIERypTSRYSLVELKPETGRKHQLRRHMKHINHP---------------------------
>UniRef50_Q1PXB6(44-217:274) Pseudouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXB6_9BACT  E=3e-19 s/c=0.56 id=23% cov=60%
----------------------------------------YVIVSKPPGIVTNGQNSIERD-LRTQFNRDRIQAVHRLDKDTSGALIFAKNENAFEEMKkvFKKHDIQKIYRVIVTGKICEPA-------------------FTINSPVGGQTAVTHITLLKKGKNTSYLEVATETGRRHQIRIHLASIGHP---------------------------
>UniRef50_D0MHX3(13-189:242) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHX3_RHOM4  E=3e-19 s/c=0.55 id=23% cov=59%
----------------------------------------------------------------------------RLDAPVSGVMVLARTSKAAARLMqqFRERTVEKVYLALVEGEL--EGSGTWEDFIAPARDH---MRLVPEDHPFGKRAVLHWQALMTRNGLTLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRARRW----LAPGQ------
>UniRef50_Q31IZ8(6-191:252) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q31IZ8_THICR   E=4e-19 s/c=0.52 id=24% cov=55%
-----------------------------------------------------------------------VYPLHRLDKATSGLLLFALDSNTARLMgqQFEEHTIQKHYLAICRG-WTAEHGEIdhaLKHKLDKLGDRHaqtnkPPQEALTNFERLATTDVMHKIGKFDSQRYSLVKLMPKTGRKHQLRRHLNHISHP---------------------------
>UniRef50_B7CDE6(61-262:295) Pseudouridine synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDE6_9FIRM  E=5e-19 s/c=0.48 id=22% cov=71%
----------------------------------------ILIVNKPYGLLSQSDQSQNQDCLVNRVqaylmekneydpNKEHSFapsICHRLDRNTTGLVIAAKNANALRKVneAIANRTIQKMYRAHVVGTFEQKDF-TMCYYIRKENTI---AKVSDKKLEGYQKALMDVHVERDDGENSICTITLHTGRFHQIRALMGHIQHPLLGDVKYG-------------------
>UniRef50_B9E7W2(75-238:273) Ribosomal large subunit pseudouridine synthase homolog n=4 Tax=Staphylococcaceae RepID=B9E7W2_MACCJ  E=5e-19 s/c=0.59 id=17% cov=53%
-----------------------------------------------------------------------VEPIHRLDQETVGLLLVAKNPFIKKILdrMLEERLIKRTYRAKVKSHLPLKH-----QTIDMPIGKDKFHPNKRRVSQTGDRAVTHIVSSKANRDGTaDVELQLETGRTHQIRVHLAEIGHP---------------------------
>UniRef50_A5CFM2(81-264:312) Pseudouridine synthase n=2 Tax=Orientia tsutsugamushi RepID=A5CFM2_ORITB  E=7e-19 s/c=0.52 id=25% cov=66%
----------------------------------------YIIINKPA-LLPTQGGSKISLSLDDAIKylnksfYYDFKLVHRLDRETTGLLIIAKNHGTAIKLSQAflHHSIEKEYIAILQGVPSQLSGEIITN-------ITKTGDRMIETQNGGKVSITKYQVKAISINSqlSLVSFIPVTGRTHQLRVHAAKIGYP---------------------------
>UniRef50_D0LYX0(97-298:345) Pseudouridine synthase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYX0_HALO1  E=2e-18 s/c=0.47 id=25% cov=53%
--------------------------------------------------------------------------AHRLDIDTSGVLVAARTQKAWHALraAFGSGAVEKHYLALTFGAPSSGEMDvalvqrgRRAHPVFRDDAGFGGFGG-RGERGDALPARTTWRIERRFGPACLLLCRAHTGRMHQIRVHLALAGAP---------------------------
>UniRef50_B1ZRU1(6-203:268) Pseudouridine synthase n=2 Tax=Opitutaceae RepID=B1ZRU1_OPITP   E=2e-18 s/c=0.48 id=30% cov=25%
----------------------------------------------------------------------GVANVHRLDADTSGLLLCAKTKPALDFLsgQFQAKTVQKTYLSLVVVLPPEEAMK----------------------------------------------------------------------------------------------
>UniRef50_C3WHA9(68-254:295) Pseudouridine synthase n=4 Tax=Fusobacterium RepID=C3WHA9_9FUSO   E=3e-18 s/c=0.50 id=18% cov=67%
----------------------------------------LFIINKNLGDVIHKGSGHDISLLEEfrsYYSNNKINFVNRIDKLTSGLVIGAKNIKTAREIAKeiQLGNILKKYYILVYGKIEKEEF-ILENYLKKDEEK---VIVSDVEKEDYKKSITHYKRINGDNDYTLLEAELKTGRTHQLRAQLNHLGH----------------------------
>UniRef50_C4Z1D5(4-190:225) Pseudouridine synthase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z1D5_EUBE2  E=3e-18 s/c=0.50 id=20% cov=58%
----------------------------------------------------------------------------RLDRPVSGLVLIAKNKSAAAKystLMQKEGGFNKQYEALICGKLSESKG-TFVDYLKKDGRTNTSAIVpadAAANDKEAKLSKLEYEVisYDEVKDITHVRIHLITGRHHQIRVQFASRRHPLVGDYKYATAD----------------
>UniRef50_C0EY52(60-319:422) Pseudouridine synthase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY52_9FIRM  E=3e-18 s/c=0.36 id=24% cov=80%
--------------SMENHKSDRGFGQSGRNRQPDREQAKvytkdragnggqerkltkeerelrkqvrvlyssedILVFHKPAGMLSQRAKASD-DSLNDYLIDYciqtgiiskeelagfRPSIANRLDRNTSGIVLAGISIKGLQRLasMLRERTLGKYYLCLVEGKVKEDAR---IAGYLTKEEKNNKVSLHKEKAEGASYIETEYKVLKSTDKASLLKIRLITGKSHQIRGHLASVGHP---------------------------
>UniRef50_C1ZMP6(6-183:246) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMP6_PLALI  E=4e-18 s/c=0.53 id=33% cov=21%
----------------------------------------------------------------------------RLDRPVSGVLLLAKTSKAASRLsaQFREREPEKVYLAIVEGQLNPAA------------------------------------------------------------------------------------------------
>UniRef50_C7R9V1(79-245:282) Pseudouridine synthase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9V1_KANKD  E=5e-18 s/c=0.56 id=26% cov=25%
----------------------------------------YSVWNKPNGVWSQGSKWGDHCSISRLVEEHfdynrQTYVVHRLDKAARGLLILAHNKE----------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q3YSF8(60-259:308) Pseudouridine synthase n=5 Tax=canis group RepID=Q3YSF8_EHRCJ   E=6e-18 s/c=0.47 id=27% cov=35%
----------------------------------------VLIINKPAGVSVQG-GTKVRISISDILDKirdgESMRIVHRLDKDTSGILMLARNARASRLIMHefKNRRVEKKYLALTQGIP----------------------------------------------------------------------------------------------------
>UniRef50_B0S254(74-228:273) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S254_FINM2   E=7e-18 s/c=0.60 id=30% cov=21%
----------------------------------------------------------------------------RLDQDTSGVVMVAKNKIAQAYY--QKNSFKKKYLAIVKGNPKDQKIE----------------------------------------------------------------------------------------------
>UniRef50_A7ZGA9(70-263:307) Pseudouridine synthase n=4 Tax=Campylobacter RepID=A7ZGA9_CAMC1   E=8e-18 s/c=0.48 id=20% cov=68%
------------------------------------------VFDKPSGVLSHPNGRHCEYSLNDeiyTLFGRDASVAHRLDCETSGVIVVGKDRNSTIKLkkIFENREVFKSYVAMVQGKIEREF--TIDAKMDLANN-YDDVKMRMQICENGKSAVTKilPIKYFDDIDTTLVRAIPLTGRQHQIRLHLFHVKHKIL-------------------------
>UniRef50_A4S4A1(62-266:357) Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4S4A1_OSTLU  E=8e-18 s/c=0.45 id=19% cov=57%
-------------------------------------------------------------------DLGRLFPIHRLDKNVSGLLLLARSSEAANEMrvKMEAREMRKEYVARVRGAFNDgdatpvsnvESLGFDSKGrVAIWRGKKGVTDLDERTLKSFKDASTKFTCIKTLVDgTSLVRCEPFTGRSHQIRAHLAMLGYP---------------------------
>UniRef50_B8CCD9(80-291:337) Predicted protein (Fragment) n=2 Tax=Thalassiosira pseudonana RepID=B8CCD9_THAPS  E=1e-17 s/c=0.44 id=21% cov=70%
----------------------------------------IVVINKPSGVLTVPGKDDNpslNKVVFERFGCEsnrmDKMVVHRLGMDTSGLVVFARTNSALRELnsLFRTRKVTRKYEALVCGHLAKDSGDIdlslMRDYEALIGLDSGEVGKKLLESPKESMTKFEVISKEEmnGKKVTRIALTSISGRTHQLNVHCAAIGHP---------------------------
>UniRef50_A7HIF3(79-280:350) Pseudouridine synthase, RluA family n=6 Tax=Cystobacterineae RepID=A7HIF3_ANADF  E=1e-17 s/c=0.45 id=25% cov=56%
-------------------------------------------------------------------PDRKVDPAHRLDRETSGLLACGSAPEWTSRMkrDFAQGRVKKTYLAIAEGAPREDTFTV-DAPLALTG--ASAVRVRMHVDAGGLASATDFEVLARrvlagGVPVALLACRPRTGRQHQIRAHLAHAGLP---------------------------
>UniRef50_A6VXE8(5-182:242) Pseudouridine synthase n=2 Tax=Marinomonas RepID=A6VXE8_MARMS   E=9e-17 s/c=0.50 id=25% cov=52%
-----------------------------------------------------------------------VFPVHRLDRGTSGVLVMAFSPEVARRLstQFAESKTQKTYHCLVRGYCNESGVINYPLAKLNEQKGRSRFKIEGTEREAEtgftrliQYQLPVPVSRYDSMRLSWLEVTPKQGRKHQIRR-----------------------------------
>UniRef50_A8EQU7(52-238:300) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=A8EQU7_ARCB4   E=1e-16 s/c=0.47 id=24% cov=21%
----------------------------------------------------------------------------RIDAETSGLVIVGKNKKSEIELkdMFQEKKYHKSYLAIVQGEIKEE-------------------------------------------------------------------------------------------------
>UniRef50_D1N1K3(89-258:321) Pseudouridine synthase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K3_9BACT  E=1e-16 s/c=0.52 id=38% cov=21%
-----------------------------------------------------------------------IHLVNRLDRETSGLLVAAKNPKAAAKLGKPGWPMRKEYLALVFG------------------------------------------------------------------------------------------------------
>UniRef50_B3PHH1(114-273:347) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=B3PHH1_CELJU  E=3e-16 s/c=0.55 id=33% cov=26%
-----------------------------------------LLVYKKPGV--SFHSEQGEPGLFEIIRQRGgyaqLYPVHRLDKVTSGLLVFAKTAEANHQLC----------------------------------------------------------------------------------------------------------------------
>UniRef50_C3XLR7(80-288:353) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XLR7_9HELI   E=3e-16 s/c=0.42 id=27% cov=28%
----------------------------------------LLILNKPANLIVHRIDENDTQfTLVDYLKQKgfalsnlgdsyRLGIVHRLDKNTSGAIVIAKNNATHAHLS----------------------------------------------------------------------------------------------------------------------
>UniRef50_Q31G00(13-177:238) Pseudouridine synthase n=6 Tax=Gammaproteobacteria RepID=Q31G00_THICR  E=6e-16 s/c=0.52 id=18% cov=58%
--------------------------------------------------------------------VEELYPVHRLDKMTSGLVIFAlsKASAKAFQQLFESRQIQKFYLAISTHKPKKKQG--WVKG---DMMPARRGSWK-LSKTLENPAITQFISQNTRPGERWFLLNPHTGKTHQLRVALKSLGAPIAGDARYA-------------------
>UniRef50_B5Y8D7(90-266:315) Pseudouridine synthase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8D7_COPPD  E=1e-15 s/c=0.48 id=24% cov=51%
----------------------------------------------------------------------------RLDKDTSGLMLVALSEKGYAGLtkMISEKSVSRKYLVAVYGVANRPF------EVDAPIGRDPRNPTRMAVVPHGKNAYTRFRPVQCLEKVSLLEAELFTGRTHQIRVHLSHAGFYVL-------------------------
>UniRef50_A1WL43(84-282:314) Pseudouridine synthase n=12 Tax=Proteobacteria RepID=A1WL43_VEREI   E=5e-15 s/c=0.42 id=19% cov=52%
--------------------------------------------------------------------LPQLSPVHRIDRDTAGLVLLSVQQctRGAYQALFRERRITKHY----------EAIAPWRADVVFPRDHTSriepgPQFFRMQEVPGPPNSHTHMQLLAVAGDWAHYRLSPSTGKRHQLRVHMAALGLP---------------------------
>UniRef50_A0KLM3(3-183:219) Pseudouridine synthase n=2 Tax=Aeromonas RepID=A0KLM3_AERHH   E=1e-14 s/c=0.45 id=22% cov=53%
-----------------------------------------------------------------------LYPVHRLDKMTSGLVLLARTTEANRALsmAFAAREVSKQYLALSDRKPKKKQG--WVKGDMQKGRGGSWMLTRTLDNPAISWFDSVSVRE----GLRLYRIKPRTGKTHQIRVALKSVGAPIL-------------------------
>UniRef50_B6TXP4(140-352:439) RNA binding protein n=3 Tax=Poaceae RepID=B6TXP4_MAIZE   E=3e-14 s/c=0.38 id=22% cov=53%
----------------------------------------------------------------------------RLDKGTSGLLVVAKDEHSHARLAEQFklHTIRRVYISLTCGAPNPNSGRIEAS---IARDPNNRIRMTAIAGSGHRYARNAASRYKvrevfAGGGSALVEWRLETGRTHQIRAHAKYIGIPLL-------------------------
>UniRef50_B3LCS5(221-347:414) Putative uncharacterized protein n=1 Tax=Plasmodium knowlesi strain H RepID=B3LCS5_PLAKH  E=4e-14 s/c=0.63 id=22% cov=54%
-----------------------------------------------------------------------------LSASSEGLVLLTNDGDFARNLKGIENNIITSYIVKVKEELTNEKIKLIEKGCNVGDVHIRPLDVHVIKQHSSSPK--------------WIKLTYVEKSHTYLNLLFSKYGLTIRKCKRFSFGPYKASDLS---------
>UniRef50_B8BWY4(2-132:175) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BWY4_THAPS  E=2e-13 s/c=0.60 id=23% cov=52%
----------------------------------------------------------------------------RLDRDTSGVFLLARNDEALKTLHDDfkdktRGRVTKRYVALVCGHWNSDNASCVADRMTTDEGEIDLPLVRDIENPPFMRVATTGNEIK--LPVTRVELQPITGRTHQLRVHCAAMGYP---------------------------
>UniRef50_C7RHE5(117-236:277) Pseudouridine synthase n=3 Tax=Anaerococcus RepID=C7RHE5_ANAPD   E=2e-13 s/c=0.65 id=22% cov=52%
-----------------------------------------------------------------------IRLVNRLDMDTSGLMLIAKNKYSHAYYQKQleENTMKKKYLAVVEGMLDIDSLYE-------NKFSYNEKKKNYEPSDKGKISRTYFKSIRINCDFSIIECEILTGRTHQIRASLTDLGHP---------------------------
>UniRef50_D1BPK0(133-338:372) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BPK0_VEIPT   E=3e-13 s/c=0.38 id=38% cov=21%
----------------------------------------------------------------------------RLDRDTTGCIVIAKSGLAQSLYQQQmdDNTFEKWYMATVEGIVEAD-------------------------------------------------------------------------------------------------
>UniRef50_C4G2Q7(7-191:236) Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2Q7_ABIDE  E=7e-13 s/c=0.41 id=26% cov=23%
---------------------------------------------------------------------PYIAVVHRLDRNVRGIMVYAKTGRAAAGLSKQiaENKLTKRYMAVVSFTPE---------------------------------------------------------------------------------------------------
>UniRef50_B6AH65(116-376:527) RNA pseudouridylate synthase family protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AH65_9CRYT  E=8e-12 s/c=0.28 id=31% cov=21%
------------------------------------------------------------------------HPINRLDRVTSGLVILSKNCDSTRLLSKVISKSHKYYLAHVEGD-----------------------------------------------------------------------------------------------------
>UniRef50_B8P3B5(63-241:348) Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P3B5_POSPM  E=2e-11 s/c=0.40 id=22% cov=35%
----------------------------------------LLLVNKPSGLVCQYNRKDDREQnahsdFNDFTDdlkrqlslDADLLPLHRLDKATTGALAFALTHSHAQDLAEQfnAHTVKKSYLAIVRG------------------------------------------------------------------------------------------------------
>UniRef50_Q5DGR1(225-464:567) SJCHGC01427 protein n=1 Tax=Schistosoma japonicum RepID=Q5DGR1_SCHJA  E=1e-08 s/c=0.26 id=31% cov=24%
----------------------------------------VIIMNKPYGIASQPGADCKHNIV-DLLPriesmirkrnhraskvkeetVDELSTVHRLDKDSTGAMLIARN------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C7NCB1(74-329:380) Pseudouridine synthase n=3 Tax=Fusobacteriaceae RepID=C7NCB1_LEPBD   E=2e-08 s/c=0.24 id=29% cov=23%
----------------------------------------------------------------------------RLDMNTSGLIIIAKNSFAQAFLQN-FSIFEKKYLAIVNGIIDDKGIARI--------------------------------------------------------------------------------------------
>UniRef50_Q9F855(37-240:241) Ribosomal large subunit pseudouridine synthase E n=107 Tax=Bacteria RepID=RLUE_VIBCH  E=1e-51 s/c=1.00 id=68% cov=87%
----------------------------SPKRPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPT-LWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREVT-
>UniRef50_UPI0001693918(28-227:249) pseudouridylate synthase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693918  E=1e-43 s/c=0.89 id=43% cov=79%
-------------------------------RAIQNQEKIYILFNKPKGVITSVSDPEGRRVVGDFLKgiKERVYPVGRLDYDTEGLLILTNDGEFANMVTHPRHHVSKTYHATVKGVPHGSVLEKLREGVKLEDGMTAPAEVEYHD-------------IDPDKKQSVISITIYEGKNRQVRRMFEAVGYPVTRLKRVKFGSIPLVGLPRGKFRRM--
>UniRef50_C8WXC0(51-229:273) Pseudouridine synthase n=3 Tax=Firmicutes RepID=C8WXC0_ALIAD   E=2e-43 s/c=0.99 id=42% cov=76%
----------------------------------------VLVLNKPVAYLSTVSDPLGRRTVMQLLPPirERVYPVGRLDYDTSGLLLFTNDGELTQRLLHPSREIEKVYRVSVRGIVDRETRRALMEGVELEDGVTAPAKVEVLRQAD------------REDGVAVVHLAIHEGRNRQVRRMFERLGLPVLRLKRIAFGPVSLGHLKTGEWRALTQ
>UniRef50_A2S4Y2(5-222:235) Pseudouridine synthase n=7 Tax=Burkholderiales RepID=A2S4Y2_BURM9   E=6e-42 s/c=0.79 id=50% cov=89%
-----------------------FAIERGPRRAAplprEPCPMRLIALNKPFGTICQFSAHETRASLGDWVKTPGVYPAGRLDADSEGLLLLTDDGALQAKIAEPRHKLVKRYWAQVEGAPDAAALAALERGVDLGDYVSRPCRARFITPPGALWPRNPPIRHRAAIPTAWIELEIAEGKNRQVRRMTAAVGFPTLRLVRVGIGALDVfaLGLAPGETREL--
>UniRef50_C4V2S0(60-227:290) Pseudouridine synthase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2S0_9FIRM  E=4e-41 s/c=1.01 id=39% cov=75%
----------------------------------------YILLHKPRGCLSTAYDDRGRRTVLDLLPhfPARLYPVGRLDADTEGLLIITNDGAMTQGLLHPRFEIDKVYRAEVTGNVTEDGLTALRNGILLDDGRTAPARLR---------------VLHREGERTVVETIIHEGRKRQVRRMFAAIGCRVQRLCRVRFAMLTLDGVSCGSFRHLT-
>UniRef50_A4CJ52(107-293:303) Pseudouridine synthase n=5 Tax=cellular organisms RepID=A4CJ52_9FLAO  E=2e-40 s/c=0.89 id=34% cov=76%
--------------------------------------KEYVLLNKPRNFITTTRDEKGRRTVMELISRasnARLVPVGRLDRNTTGLLLFTNDGELAKKLTHPKHGVRKIYHVELDKTFKSADLGKLREGLELEDGRIEVDEASYIDGASKKE----------------VGVELHSGRNRIVRRIFEHLGYQVVKLDRVVLAGLTKKDLPRGHWRHLTE
>UniRef50_C5WHE9(27-230:245) Pseudouridine synthase n=3 Tax=Lactobacillales RepID=C5WHE9_STRDG   E=2e-39 s/c=0.80 id=37% cov=75%
----------------------------------------YYILNKPAGFLSATKD-RAQATVIDLLDetarQKDVFPVGRLDKDTRGLLLLTNNGQLAHDLLSPKKHVTKEYLAKVAGIMTDADKDDFAKGISLKDHQCLPAKLEVLDKDLSQE-------------TCVVSITIQEGKFHQVKRMVAACGKEVLELQRLSMGPLRLDpGLAEGDFRRLT-
>UniRef50_Q47QM5(160-362:375) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=Q47QM5_THEFY   E=3e-39 s/c=0.80 id=34% cov=88%
------------RVSVDGQIVRRFGARVDPEkseirvdgmRVVTSQNLRYYALNKPRGVVSTMFDPEGRPTIGDYAAQigpieERLFHVGRLDTDTEGLILLTNDGELANRLTHPRYKVTKTYLAKVPGPVPRDVIRQIRKGVELDDGFVKVDSFRVIDNIEPKA---------------LVEIRLHEGRKHIVRRLMKAVGHPVSDLARTQIGPVGLNNLKSGTIRALT-
>UniRef50_B4D966(26-219:237) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D966_9BACT  E=6e-39 s/c=0.84 id=35% cov=72%
-----------------------------------------VLLNKPAGYVCTASDERDRKTIFDLLPAnwPRVYHVGRLDKDSEGLLLVTNDGDLSLALTHPRYKIEKEYEVLLDKPFNPQDREKLLKGFHIIGGRAKAERVEILNP-------------------THLSLTLTQGIKRQIRLMLYDLGYEVERLARIRLGPLKIGEMRPGEWRLLT-
>UniRef50_B1C6T1(30-230:238) Pseudouridine synthase n=2 Tax=Clostridiales RepID=B1C6T1_9FIRM   E=6e-39 s/c=0.81 id=33% cov=75%
----------------------------------------YYMLNKPQGVISASKSKYGEETVVDLLgkKEHRLFPVGRLDKDTTGLIILTNDGDFAYKLTHPKYEKEKTYEALVKGKVDSKSLDKLKQGVVIDGKKTSRAKVRLV---------------KMIGVNSLVEITLIEGRKRQVKKMCEKVGHKVIKLNRTMENGLSLGDLEIGEYRKLTK
>UniRef50_B5INL2(5-199:243) Ribosomal large subunit pseudouridine synthase E n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INL2_9CHRO  E=6e-39 s/c=0.83 id=56% cov=84%
---------------------------------PASRPTT-LLFHKPYGVLSQFTPEPGsrWRCLADFIAVPGVYAAGRLDADSEGLLLLTANGRLQQRLTDPAFGHWRTYWVQVEGEAgqRPEALQQLRQGVVIQGRLTRPALVRCLSDPK-LPERDPPIRQRATIPVSWLELQLQEGRNRQVRRMTARVGLPTLRLIRVAIdlmdgeAPLSLSGLKPGDWRRVS-
>UniRef50_Q6SI36(49-234:255) Pseudouridine synthase n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI36_9BACT  E=6e-39 s/c=0.87 id=36% cov=81%
------------------------------RKVKTGRPRIYLLVCKPRGYVTTRFDPEGRRTILNLISnvREYVYPVGRLDYDSEGLVILTNDGTLAARLTHPRYGVERVYEVRVRGVPSQAAIDSLRHGVLINGRRTASSSVKFLRRLKAKSSE-----------NALLRVAIREGRNRQVRKMCEAIGHPVIRLRRTQIGPLRDSSLKVGKHRLLT-
>UniRef50_A5TWE7(26-225:234) Pseudouridine synthase n=10 Tax=Fusobacterium RepID=A5TWE7_FUSNP   E=9e-39 s/c=0.81 id=35% cov=77%
-----------------------------------NEEKVYFMLNKPLEVLSSSSDDRGRKTVVDLIKtDKRIFPIGRLDYMTSGLILLTNDGELFNRVVHPKSEIYKKYYIKILGELKKEEIDELKKGVLLDDGKTLPAKIS---------------GIKYDKNKTSMFISIREGRNRQIRRMIEKFEYKVLMLRREKIGELALGDLPEGKYRELTK
>UniRef50_A4SY81(251-423:587) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=A4SY81_POLSQ   E=4e-38 s/c=0.92 id=36% cov=78%
-------------------------------RKIQTKPPRVIMYHKPAGEIVSQSDPEGRPTVFDRLPKPrqgRWIAVGRLDFNTEGLLLFTTSGELANRLMHPRYGVEREYAVRILGDLSQENTALLKSGITLDDGQAKFLRLAMGGGEGA---------------NRWYHVALSEGRNREVRRMFEAVGHTVSRLIRTRYGIFLLpPRLRRGKWEEI--
>UniRef50_Q1GFA6(87-284:422) Pseudouridine synthase n=3 Tax=Rhodobacteraceae RepID=Q1GFA6_SILST   E=5e-38 s/c=0.80 id=37% cov=77%
---------------------------------PEAEAPRLWLYYKPNGLVTTTSDEKGRKTIFDALPEdlPRVMTVGRLDLNSEGLLLLTNDGGVKRQLELPSTGWLRRYRVRINGRPQDHEFDVLRKGVVIDGERFQPMTISL---------------DRQQGANAWLTIGLREGKNREIRRAMEEVGYPVNRLLRISYGPFQLGTLKEGEVEEL--
>UniRef50_B0VG32(65-263:279) Pseudouridine synthase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VG32_9BACT  E=1e-37 s/c=0.79 id=38% cov=73%
----------------------------------------YLILNKPRGYVVSQNDELGRKTVYSLLPPKGkqLAYAGRLDKESEGLLFFTNDTALINLLTHPKNKVEKVYRVDINRPLNNMELNMLRKGVEIEGGKTLPAGI--------------FVKSKNANGMTL-KIVITEGRKRQIRQMIEAVGAKVTYLKRLQFGPLKLKDLPVGRWR----
>UniRef50_C7PP04(305-506:516) Pseudouridine synthase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP04_CHIPD  E=2e-37 s/c=0.78 id=36% cov=75%
----------------------------------------YILLNKPKGYITTTDDPEGRKTVMELIqdattEEQRVYPVGRLDRNTSGLLLLTNDGELAQKLAHPKHNIKKIYHVGLNKPLTKAHFENILQGVTLEDGVANVDALGYVE----------------AGDKTQVGIEIHSGKNRIVRRIFEHLEYEVEKLDRVTYAGLTKKNINRGKWRFLTE
>UniRef50_B9KC52(26-220:240) Pseudouridine synthase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC52_THENN  E=4e-37 s/c=0.81 id=41% cov=73%
----------------------------------------YILFYKPAGYVTSTRDPHSE-TIMEFLPDiKGIFPVGRLDKDAEGLLLVTNDGEFAHRVISPRWKVEKEYVVKVEGEITEDKLEKLRRGVSLRDGFFAKAK----------------HVEKISNDT--VKIVITEGKYHQVKRMMAAVGLKTIHLKRVRIGGLRLPqEMKPGEYRFLSE
>UniRef50_D0LG91(50-231:553) Pseudouridine synthase n=3 Tax=Bacteria RepID=D0LG91_HALO1   E=6e-37 s/c=0.86 id=40% cov=76%
----------------------------------------YVLLNKPKGCLTAVTDPENRPTVMEYLHglPARVVPVGRLDFYSEGVLLLTNDGDLSARLQSPRHHVEKTYHVKVRDQVTERHLEVLRQGVRLEDGTvTRPAQIDMLGGTKSRHD--------------WLVITLTEGKSRQIHRMLGVLGYTVMKLQRVAFGGLTFHGLRVGDARELTQ
>UniRef50_C9LMR9(48-227:239) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMR9_9FIRM  E=8e-37 s/c=0.86 id=33% cov=77%
-----------------------------------PEPLRYYLFHKPDCVITSVSDPAGRRTVMDYFRrvRERVFPVGRLDYHSEGLLLVTNDGQLDFILTHPCHEVQKEYEVVVRGKFSEKLAKKMEKGVKIDSGVTAPCEIEVLG-------------YDAEKNKTRLRMVLHEGKNREIRKMMEIFHYPVFELKRIRYSFLTL-DVNRGQYRRLT-
>UniRef50_Q55578(46-235:249) Uncharacterized RNA pseudouridine synthase slr0361 n=21 Tax=Cyanobacteria RepID=Y361_SYNY3  E=2e-36 s/c=0.81 id=42% cov=78%
--------------------------------KADNRPRDiYLLVNKPRDVLSTCDDPRGRKTVLDLLPQdlqrgKGLHPVGRLDRNSTGALLLTNDGELTLRLTHPRYHLPKTYDVWLEGNPSDEDLEKWRSGMMLDGKKTLPATLEVISENKDQI---------------HLLVTLTEGRNRQIRRLAEELGLTVLKLHRRTIGPLQLHTrgkvLGSGQFRFLS-
>UniRef50_A8S8D3(40-225:233) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8D3_9FIRM  E=2e-36 s/c=0.83 id=32% cov=74%
----------------------------------------YLMLNKPEGVVSASTDKRD-TTVVDLVgdayPRRELFPAGRLDKTSTGFVLLTDDGGFAHDILSPRHHVSKTYTVTIDTPLTQEMCTGFAAGVTLADGTAlSPAEVTALSPDGLT-----------------VRVVLRQGVYHQIKRMFGVYGAGVNALHREAIGGLALDaQLAPGQWRELSD
>UniRef50_A5EVQ2(70-242:266) Pseudouridine synthase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVQ2_DICNV  E=3e-36 s/c=0.88 id=34% cov=78%
-------------------------------------PHMILMYHKPAGEICTRKDPEGRVSVFQHLPKishGRWVAIGRLDLNTSGLLLFTNDGALANQLMHPSAEIEREYWVRVAGEVTEEMLTALRQGIPLDDGLARFTEICPL----------KTLHEDDTQFNRYFSVTLKEGRNREVRRLWEAVGCKVSRLKRIRYGTISLpPSLSAGRHRLLT-
>UniRef50_C1DTU8(27-230:247) Pseudouridine synthase n=5 Tax=Bacteria RepID=C1DTU8_SULAA   E=3e-36 s/c=0.75 id=31% cov=75%
----------------------------------------YLAIYKPVGYLSAvGKDRFGRKTLTDFLNelkiPYKLFPVGRLDYNSEGLLILTNDGEFANKVAHPRNEIKKVYKVKVAGEVSQETLKKMEEGTILEDGFFKPDKIKM---------------LKREEDGTWLLVEIHSGKKRIIRRFMDSFGHRVKRLIRVKIGSIDIGNLKPFDYRYLSE
>UniRef50_C8WBY9(319-494:509) Pseudouridine synthase n=3 Tax=Zymomonas mobilis RepID=C8WBY9_ZYMMN   E=3e-36 s/c=0.87 id=37% cov=77%
----------------------------------APTETRLFLYHKATGLLTTERDPEGRKTIYDRLPAdlPRVMPVGRLDMNTEGLLLLTTDGGFKRMLELPATHIERCYRARVFGDVSQDQLEELIEGVTIDGIHYGSIDANL---------------ERRTGRNGWVEMKLHEGRNREVRRVLGYLGLQVSRLIRISYGPFLLGDLPVGAVEEV--
>UniRef50_D1R854(73-252:261) Pseudouridine synthase n=4 Tax=Chlamydiales RepID=D1R854_9CHLA   E=4e-36 s/c=0.85 id=29% cov=75%
------------------------------------QNKVYYILNKPIGYICSNKRNKDSKIVLDLFDtvEERLFTVGRLDKDTSGLIIVTNDGHFANRVIHPSANIHKEYLVKTNEEVEAEHLSALSSGTLVEKTFVRPIRVSKVRRGT-------------------LKITIAEGKKREIRLLMESAKLPVLELTRIRIGGLHLGPLQPGEWREMT-
>UniRef50_A5IKF7(38-220:239) Pseudouridine synthase n=5 Tax=Thermotogaceae RepID=A5IKF7_THEP1   E=5e-36 s/c=0.84 id=40% cov=73%
----------------------------------------YILFHKPSGYVTSTKDPHSE-TIMEFLPPlKGIFPVGRLDKDAEGLLIITSDGDFAHRVISPKWSVEKEYIVKVEGEVTEDKIEKLKNGVTLRDGFFAKAK----------------CVEKLSNDT--LKIVITEGKYHQIKRMTVAVGLRTVHLKRTRIGRLVLpEDMKPGEYRFLSE
>UniRef50_A8U325(43-231:387) Pseudouridine synthase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U325_9PROT  E=5e-36 s/c=0.81 id=35% cov=77%
---------------------------------PEIEPPRLWRYHKPDGLVTSNRDPEGRSTVFDRLPKdlPRVVTVGRLDIDSEGLLLLTNDGGLARYLELPSTGWVRRYRVRVFGPLDEAKLDNLKKGVRIEGVEYGPIEVTI---------------DKATRTNSWLTVALREGKNREIRRVMEHVGLTVSRLIRTTYGPFQLGEVPPGGVEEI--
>UniRef50_C3BQR1(28-192:203) Pseudouridine synthase n=3 Tax=Bacillus RepID=C3BQR1_9BACI   E=5e-36 s/c=0.92 id=31% cov=76%
--------------------------------EKEDKEKIYIAFHKPVGITCTAADHIDGNIIEYINHPERIFPVGRLDKASEGLILLTNDGRIANQILHGDYEHEKEYIVTVDKPFTDWFIDGMSRGVKIKDGITKQCKVTRV-------------------NSSTFRIILTQGMNRQIRRMSRAFGYTVTKLKRVRIMNIKLDGLEAGEWRNVT-
>UniRef50_Q1IR68(32-236:254) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR68_ACIBL  E=8e-36 s/c=0.74 id=38% cov=75%
----------------------------------------YYVVNKPRGLITTASDEKGRETIYSLLPPdsPWVAPVGRLDKASEGLLLLTNDSEWAAKITDPNSHLDKTYHVQVSTLPSEQMVEALSRGIRSDGELLLAKRVSI---------------LRAGGKNGWLEIVLEEGKNRQIRRMVAALQIEVLRLIRVAIGPLTLGELPKGGCRALT-
>UniRef50_A0LG30(45-227:250) Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LG30_SYNFM  E=8e-36 s/c=0.83 id=40% cov=74%
----------------------------------------YLLLFKPRCCVTTARDPQGRKTVFDFVPDagARLFPVGRLDFDAEGLLLLTNDGLLANRLQHPRYGVTKTYEVAAMGHPTPAALDRLRTGVMLEEGMTAPAEVTVIGS---------------SPRSTRLRIVLHQGWNRQIKRMGEAVGHPVLSIKRVAFGPLKLGSLKPGGSRHL--
>UniRef50_C1DA59(491-683:703) Pseudouridine synthase n=6 Tax=Betaproteobacteria RepID=C1DA59_LARHH  E=1e-35 s/c=0.79 id=33% cov=84%
----------------------RVDSKPVLIRWPDRLP-RVIVYHKQEGEIVTRDDPEGRTTVFDRLPQTRsskWVAIGRLDVNTSGLLIFTTSGDLANRMTHPSFEVEREYAVRVLGKLTPEQMKETTAGVQLDDGPASFQFIREDDDK-------------EDSVNHWYRVGIREGRNREVRRMFEHFGLTVSRLMRVRFGIVTLPSrLKRGQFYELNE
>UniRef50_C0W3E8(120-312:325) Pseudouridine synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3E8_9ACTO  E=1e-35 s/c=0.79 id=35% cov=74%
-----------------------------------------VLLHKPAGVVTTMEDPQGRPTVADLaeqfisehrteLEHPesvRLVHVGRLDTETEGLLLLSNDGDLAHRLMHPSFEISKTYVAIVEGQVEGWVPRKLRRGIELDDGLAQADRV---------------VVKDAGPSGSIVEITLHSGKNRIVRRMLDAVGHPVTRLARTKLGPLGIGGLRPGQMRRLT-
>UniRef50_A9KNY1(33-230:240) Pseudouridine synthase n=3 Tax=Firmicutes RepID=A9KNY1_CLOPH   E=2e-35 s/c=0.76 id=33% cov=73%
----------------------------------------YFMLNKPAGVVSASNDKKQ-TTVVDLIDEakrKDLFPVGRLDKDTEGLLIITNDGDLAHQLLSPKKHVDKVYFAKLRDPLKKEDEEAFAAGLKIDEEFTaLPAKLERISEQEAY-------------------VTIREGKFHQIKRMFEATRNEVIYLKRISMGSLVLDEsLSLGEYRELTE
>UniRef50_A6DMJ6(53-231:239) Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMJ6_9BACT  E=2e-35 s/c=0.84 id=34% cov=75%
----------------------------------EYRETIYFMLNKPKGYVCAAKDER-LKTVLDLLPPalasREPFSCGRLDIDTTGLVILTDDGTWAHGITSPKRKCEKSYLVGSVSELSDEDMRNLEQGVYLdgDDKITAPAKIEKIDEKT-------------------YRLKITEGRYHQVKRMFEAVDNMVKSLHREQIGGLSLdDDLDEGNWRDLT-
>UniRef50_Q9HZ55(50-244:386) Ribosomal large subunit pseudouridine synthase B n=67 Tax=Gammaproteobacteria RepID=RLUB_PSEAE  E=3e-35 s/c=0.77 id=33% cov=79%
------------------------------REEAAESVRRVLIYNKPEGEVCTRDDPEGRPTIFDRLPRlrtGRWINVGRLDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVTEEMIERLLNGVMLEDGPAKFSDIQQAPGGEGF--------------NHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLtSELTMGRYREM--
>UniRef50_Q4FV02(6-191:208) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=Q4FV02_PSYA2   E=5e-35 s/c=0.80 id=56% cov=79%
----------------------------------------LILFNKPYGVQSQFRDDSnnDHTTLSEYFTDKSLRIAGRLDATSEGLLILTSDGRINKAITQPpsaknfaqnKQKQGKTYLVQVEGVVTAVQLKELASGVILKDGKTLPASATLLDEADlpiTLWQRDPPIRERKNIPTSWLMLTIYEGKNRQVRRMTAHVGLPCLRLIRWSVAGFELGELGVGE------
>UniRef50_A8ZRV1(68-229:241) Pseudouridine synthase n=3 Tax=Desulfobacteraceae RepID=A8ZRV1_DESOH  E=5e-35 s/c=0.92 id=34% cov=74%
--------------------------------------HVYIALNKPPGYVTSCLQKQ-ETTVMELVAVDqRVFPVGRLDKPSCGLLLMTSDGGLHQRLSHPSFDHEKEYDVACDRPVSDADLDAMRRGMVITGRKTRPAKVKRLSDRRFL-------------------IILQEGRNRQIRRMAEMLGNRVVLLRRIRIAHIHLGDLAEGRWRYLTE
>UniRef50_B3DRY9(55-244:256) Pseudouridine synthase n=7 Tax=Bifidobacterium RepID=B3DRY9_BIFLD   E=6e-35 s/c=0.78 id=33% cov=79%
-------------------------------RVRVNPNHVTLALNKPRKVLSAMDDPKGRYTLRDIVgdKYERIFHMGRLDYDSEGLILMTNDGELSQHVMHPKYEVEKTYVATLEGKISGTVCRRLvTTGVQLDDGWIKLDHCAIIDS---------------SRDHTMVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGDLKPGSYRVLSQ
>UniRef50_C2KPR0(102-265:278) Pseudouridine synthase n=3 Tax=Mobiluncus RepID=C2KPR0_9ACTO   E=7e-35 s/c=0.91 id=37% cov=75%
---------------------------------------QVWAFNKPVGTVSTMQPEDDRPCLGDWATklPQRVFHVGRLDVATAGLILLTNNGDLANRLVHPRYEVPKTYVAMVQGQVKPGLGKVLRRGVELEDGVTKVDTFKLVEVRRGS---------------SIVQLTLHSGKNRVVRRLLSEVGHPVSALTRTAIGTLRLGDLKEGHFRLLT-
>UniRef50_B1X5I1(46-230:242) Pseudouridine synthase, Rsu n=1 Tax=Paulinella chromatophora RepID=B1X5I1_PAUCH  E=8e-35 s/c=0.81 id=33% cov=77%
-------------------------------RLPDN--HVTLLINKPTGVISSCQDPQGRPTILDLIPQsilqnRKLHPIGRLDSNSRGALILTTDGSLTMNLSHPRYSHDKAYKVWVEGRPSSSVIKIWQQGIFLDKKMTSRVELKI---------------LCKRVTSTLLEIVMKEGRKRQIRRTATFLGHPVIDLQRIGIASIRLGSLPEGRWRKL--
>UniRef50_A7HC79(57-235:354) Pseudouridine synthase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HC79_ANADF  E=2e-34 s/c=0.82 id=33% cov=74%
----------------------------------------YYLLYKPPGCVTTASDPEGRPTALEYLRgvKERVFSVGRLDFDAEGAVLFTDDGELANRLAHPRYGHRRTYLVKVRGEPPPAALERLVAGVRLEDGPARALEA---------------VPHERAERNVWIRVVVGEGRFHLVKRLCEAVGLQVQRLYRPEFGGITVEGLRPGQFRPL--
>UniRef50_A9MDW0(129-326:611) Pseudouridine synthase n=43 Tax=Rhizobiales RepID=A9MDW0_BRUC2   E=2e-34 s/c=0.74 id=37% cov=75%
--------------------------------------TRLWLYHKPAGLVTTNRDPEGRPTVFEALPPemPRVLSVGRLDINTEGLLLLTNDGGLSRVLELPSTGWLRRYRVRAHGKVTQQQLDELKNGIAVDGVFYGSVEAEL---------------ERVQGANVWISIGLREGKNREVKNILGALGLTVGRLIRVSFGPFQLGDLEEGAVREI--
>UniRef50_UPI000196C3BC(29-214:234) hypothetical protein CATMIT_02354 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C3BC  E=3e-34 s/c=0.79 id=29% cov=75%
----------------------------------DPHPLKYYIIHKPSGYVCANKDSHD-PCLISLLPDDNLHYVGRLDRNTTGLVILTNDLKLRKRLTLPEFHIPRTYAFTCLNPL--KDITPFKEGITIDgDVKCLPAIVEMTSEYEGV-------------------ITLEEGRYHEIKKMFLSLNNKITSLHRIMYGDISLGDLPSGTYRTLTQ
>UniRef50_A7HJ83(54-236:245) RNA-binding S4 domain protein n=3 Tax=Thermotogaceae RepID=A7HJ83_FERNB  E=7e-34 s/c=0.80 id=30% cov=76%
--------------------------------RIEPHKNVYIIFHKPSGFVSTTSDRE--PSVLNLIDHPylnELHIAGRLDKDVEGLLILTNDGEFTHNLISPKKHIEKEYWIYTKEnvEVTQNMVKMVSEGIELEKGtKTLPGKIRKVSEK-------------------IISLTIVEGKYHQVKKMCISLGIEWEKIVRVRIGNLTLEGLEKGKWKELSK
>UniRef50_O05668(77-242:256) Uncharacterized RNA pseudouridine synthase ML1370 n=49 Tax=Actinomycetales RepID=Y1370_MYCLE  E=8e-34 s/c=0.87 id=34% cov=74%
----------------------------------------YLALNKPRGMYSTMSDDRGRPCVGDLIERRvrgnkKLFHVGRLDADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVVDAIPGK---------------TLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLRAL--
>UniRef50_Q3Z8C8(36-235:249) Pseudouridine synthase n=5 Tax=Dehalococcoides RepID=Q3Z8C8_DEHE1   E=6e-33 s/c=0.71 id=37% cov=74%
----------------------------------------YLMLNKPPEIVSTTSDELGRKTVMDLLHRRyegaGLFPVGRLDETTTGLLLLTNDGELTNRLTHPSYEIEKEYLISIDAALTQADKESLEKGMLLDDGLTSPARLSRVTDEPPYN----------------YKLIIHEGKKRIVRRMFAHLGYQIKALKRSRIATLRLGKLEEGKTRELT-
>UniRef50_UPI0001745920(25-222:235) putative pseudouridylate synthase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745920  E=1e-32 s/c=0.71 id=35% cov=82%
------------------HEVDRFSTVWLDDTLVqEGESALYIMLHKPVGYLSATRDPQ-HPTVIDLIDHPAretLHIAGRLDRSSSGLLLLTNDGRWSRRLTEPGEKVDKVYLVETAEPIAPEAVELFAKGFYFhtEDLTTLPAELGILGER-------------------LARVTLHEGRYHQIKRMFHRVGNRVISLHRESIGSLVLPvELFPGQWREI--
>UniRef50_Q13BM8(524-698:795) Pseudouridine synthase n=55 Tax=Alphaproteobacteria RepID=Q13BM8_RHOPS  E=2e-32 s/c=0.81 id=36% cov=77%
---------------------------------PERERTRLFLYHKPRGLMTTHADPEGRPTVFDNLPEdlPRLISIGRLDFNTEGLLLLTNDGGLARALELPETGWLRRYRVRAHGEVTQAQLDQLASGVEVDGVKYGPIEAKL---------------ERDQGANVWLVFAIREGKNREVRNVLAHLGLEVNRLIRVSYGPFQLLEIEEGQVEEV--
>UniRef50_B7VP37(46-230:241) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=B7VP37_VIBSL  E=4e-32 s/c=0.76 id=30% cov=74%
------------------------------------REFRYILMHKPAGTICSNID-EVYPSLFNYLELEKaseLHIAGRLDADTTGLVLITDDGRWSFNITLPTKSCKKVYRVILSRDIKDDVADKFKAGIQLQGeqKLTRPAELEVITSKE-------------------VLLTITEGKFHQVKRMFAAVGNRVVGLHREQIGDVRL-DVEAGQWRYLTK
>UniRef50_Q89AL1(42-234:247) Ribosomal large subunit pseudouridine synthase B n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RLUB_BUCBP  E=5e-32 s/c=0.72 id=34% cov=85%
-----ISINVIQKVIINNNNYKP--------KLNINKSLKVLLYNKPEGEICTRKDQRNRRTIFEKLPKlsnARWINIGRLDLNSSGLLLFTTDGELAYRLTHPSFNIERIYKVRVFGQFTENILKQLNVRVKLLDGYANFKSIQFKYGEG---------------KNKWFNVSLCEGRHRIVRRIWEKLGFQVNKLVRISYAHLTLPKtLFPGTW-----
>UniRef50_B0N857(35-224:235) Pseudouridine synthase n=3 Tax=Bacteria RepID=B0N857_9FIRM   E=2e-31 s/c=0.73 id=32% cov=74%
------------------------------------QPFVYYMMNKPADYLCANHDKY-HQCVIDLIGREDCYCLGRLDIDTTGLLIITNDTSLSKKLLLPQNHVNKKYYVTTKFPLKDELIKKFFDGVVIDHKVqCLPSLLEILDEY-------------------HCLVTINEGRYHQIKKMFKSCQNEVCTLKRIAFAGIELDqKLALGEYRDLT-
>UniRef50_Q2G8T2(54-257:270) Pseudouridine synthase n=5 Tax=Sphingomonadales RepID=Q2G8T2_NOVAD   E=2e-31 s/c=0.67 id=34% cov=76%
-------------------------------------PPRLFRFHKPSGLITAERDPTGRPTIYTALrnalpqGTPRVMPVGRLDVNTEGLLLMTNDGELKRALELPSTGIPRTYRARTFGDISQARLEELMEGIEIDGVRYGSINANL---------------ERSAGRNKWIELTLTEGKNREVRRVLEHLGLQVSRLLRTKYGPFELADLPRGAAEEI--
>UniRef50_A1KUC7(35-226:230) Pseudouridine synthase n=29 Tax=Neisseriaceae RepID=A1KUC7_NEIMF   E=1e-30 s/c=0.70 id=34% cov=74%
-----------------------------------PEPYFYIMLNKPEDYETSHK-PKHYRSVFSLFPDNmrniDMQAVGRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHDENETVCAADAVLE----------------NPTTLL-LTITEGKYHQVKRMIAAVGNRVQHLHRRRFAHLETENLKPGEWK----
>UniRef50_D0L0G8(65-230:369) Pseudouridine synthase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0G8_HALNC  E=3e-30 s/c=0.81 id=35% cov=75%
---------------------------------------RVIIYHKPEGEITSTSDPEGRPTVFGSLPairQGRWITVGRLDFNTSGLLLATNDGELANRLMHPSHQIERTYAVRVLGGLTEDQVKQLTTEVQLDDG---PAHFDQLSDAGG------------TGVNRWYHVTLREGRNREIRRMIEAVGAVVSRLIRISYAGIPLpPRLKPGRAQDL--
>UniRef50_C0ACE6(54-250:253) Pseudouridine synthase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ACE6_9BACT  E=8e-30 s/c=0.67 id=29% cov=74%
----------------------------------------LLMLHKPTGFVCSH-DEREGPRVYDLLPPrwrarnPQVTSIGRLDKDTSGLLILTDRTELVHTYTSPRHKVPKLYRATLDRDVPASLVDLFAAGTLQLDGEKAPCAPATLRLPAPRVA----------------ELVLVEGKYHQVRRMFaAAAGATVLTLHRECFGRLTLGDLKPGEYREISE
>UniRef50_A5FK52(107-293:302) Ribosomal large subunit pseudouridine synthase B n=3 Tax=Flavobacteriales RepID=A5FK52_FLAJ1  E=9e-30 s/c=0.71 id=23% cov=77%
-----------------------------------PEKKEYILLNKPKNFTTALDEGQEYRNVLELVRAatnAKIAPIGRMDKNTTGLLLFTNDTDMIRKFSLPNQKSPKIYQVSLDKNLKFEDLEKISKGLVLDGHRVSVEEISYIEKE----------------PKSEVGLKLRSSNVKVVRAIFENFDYNVLRIDRVSFAGLTKKNLPRGNWRFLTD
>UniRef50_C6XLQ6(32-237:247) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLQ6_HIRBI  E=3e-29 s/c=0.63 id=30% cov=76%
----------------------------------DPLPGFAVMLNKPAGVTCSRKDSG--TLITELFPsrwdkrDPLLSPIGRLDKETSGLLLLTDDGQLNHRVSSPKTQTPKRYHVILDRDLNGDEDSIFAAGELMLESETKPLLPAELSALGKREAI----------------LTLHEGRYHQVRRMFAAVGNHVNALHRESIGGLTLpEDLQQGQWRIMSE
>UniRef50_A4IDD7(545-740:877) tRNA pseudouridine synthase A, putative n=3 Tax=Leishmania RepID=A4IDD7_LEIIN  E=4e-29 s/c=0.66 id=25% cov=89%
--------NVTERNPFRLVQAQDDVHVAGHQSRLRFAPPRLWIYHKPAHVIVSRNDAAGRTLItkhARILGMDHLVPVGSLPMRAHGILLLTNDGELSRFLENPKSMVQRTYLLRVRPAFDPVLVHKLnTEGIHINGRLYR--NAEFFVNPATKSRYSVKVKVR--------------GESMPIAHLMQHLGRTVERGGRISFGPFALSNLAVGSVREVT-
>UniRef50_C6B2K7(77-274:698) RNA-binding S4 domain protein n=20 Tax=Alphaproteobacteria RepID=C6B2K7_RHILS  E=4e-29 s/c=0.66 id=33% cov=75%
--------------------------------------TRLWLYHKPTGLVTTNADPEGRSTVFDNLPEelPRVMSIGRLDINTEGLLLLTNDGGLARALELPATGWLRRYRVRAHGEIDQDALDKLKDGIAVDGVLYGSIEATL---------------DRTQGSNVWITMGLREGKNREIKNVLGALGLDVNRLIRISYGPFQLGDLPESHVVEV--
>UniRef50_Q21EB0(46-232:249) Pseudouridine synthase n=14 Tax=Gammaproteobacteria RepID=Q21EB0_SACD2  E=5e-29 s/c=0.70 id=35% cov=73%
----------------------------------------YIMLNKPAGRVSATKDS-THPTVVGCLPQQlqaNIHIVGRLDFNSTGLMLLTNNGAWSRHLTSPENKVNKIYEVELERTINDDEwpqyISAFASGMYfaFEDLTTQPAKLERLT-------------------ATRARVTLVEGRYHQIKRMFGRFRNKVIALHRTQLGALPLDpALQPGEHRLLND
>UniRef50_Q04T62(38-239:244) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04T62_LEPBJ   E=1e-28 s/c=0.63 id=30% cov=73%
--------------------------------EPTRKPKRILILNKPVGYLCSHGDRFHEKTVFSLLPltYKNFKIAGRLDLNSRGLLILTNDGELAQKISHPSNGSEKEYLVTLNHDPGEKWIQaAFQKGILDAGEILRAKMVKLVP-----------------GKNCVYRVILAEGKKRQIRRMFHASGASVIDLQRIRIGSIQLEKL----------
>UniRef50_B8ET33(63-235:255) Pseudouridine synthase n=29 Tax=Proteobacteria RepID=B8ET33_METSB   E=3e-28 s/c=0.73 id=33% cov=72%
----------------------------------DPPPGMVIALNKPRGVTCSRK--EAGPLVFDLLPPrfrlrePALSTVGRLDKDTSGLLLITDDGALLHRLISPKHNIAKRYCAKLARPLRGDEAEIFASGeMMLDDeaKPLLPAVLRVLSP-------------------TEAEVSVTEGRYHQIRRMFAATGNHVLELHRMSIGDFALPlTLAPGD------
>UniRef50_Q0C3M6(55-260:305) Pseudouridine synthase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C3M6_HYPNA  E=3e-28 s/c=0.62 id=35% cov=77%
----------------------------------APDASRLWRYHKPSGLITTTNDPAGRRTIFDELPKslPRTVTVGRLDLTTEGLLLLTNDGELARFLELPKSALERTYRVRAKGTVTQLKIDELASGITVEGVKYQPIKA---------------VFDREMGANSWLTVTLTEGKNREVRKALESVGLTVNRLIRVSYGPFLLADLKPGQVDEV--
>UniRef50_A1VDC0(108-279:292) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1VDC0_DESVV  E=4e-28 s/c=0.73 id=38% cov=76%
--------------------------------------HTYVMLNKPVQVVSTVRDPQGRTTILDILPDDlktvRLYPVGRLDFFSEGLLLLTDDGDLTHRLTHPKWHLPKYYRVLVREDIPPAALTAMRSGMTLaEGDRVAPVEAYIIDRSEYGVE---------------LEMVLHQGINRQIRRMCRDLGLTVLRLLRIQQGPVELGNLSRGSCRRLED
>UniRef50_A4BXB5(1-179:181) Pseudouridine synthase n=2 Tax=Bacteroidetes RepID=A4BXB5_9FLAO   E=5e-28 s/c=0.70 id=45% cov=78%
--------------------------------------------HKPWGMISQFVNPAKRKktLLGDLYGfPEGTMAIGRLDVPSEGLLLLTTDGKVSAEI--RSNAYEKEYYVQVDGIMTAAALENLKTGVEIGfkgtKYVTKPGKAMLLKDPR-FPLRSQKIRDERHGPTSWISIIIKEGKFRQVRKMTAAVGFPTLRLVRVRIGTMKLGELAIGAVVEV--
>UniRef50_A5IYZ4(46-223:232) 16S rRNA uridine 516 pseudouridylate synthaseand related pseudouridylate synthase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IYZ4_MYCAP  E=8e-28 s/c=0.70 id=32% cov=73%
---------------------------------------QYYMFNKPANFICANSDSE-EATIFDIvgLPAEKFFSFGRLDKDTEGLLILSNDGQMCHRLLSPKNHVPKKYYVKVDKKIDSEILLNHSPIKINDDFIVSKYILELIDDKGCF-------------------LTIYEGKFHQIKRMFGSLGFSVLYLKRVEFGKLKLDnNLKLGQVRKLSE
>UniRef50_D0MUX7(75-287:293) Ribosomal large subunit pseudouridine synthase F, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MUX7_PHYIN  E=1e-27 s/c=0.59 id=34% cov=76%
-------------------------------RAQRHQNKKVtLVLNKPLGYVS--SQPELNKTpavrlltfenecqeLSRVKPRQNVEPValwkmavcGRLDVNSTGLLLFTQDGTVAKKLLDPKGGIEKEYLVRVDLNLDPltdkirRKIEVLQAGVTSDEGITYRAKSVEI------------------LNANQLRVVLTEGKNRHIRRMCEHVGLRVMALKRVRIGGVKLGSLPVGQWRYL--
>UniRef50_Q4FVR0(31-232:239) Pseudouridine synthase n=4 Tax=Moraxellaceae RepID=Q4FVR0_PSYA2   E=4e-27 s/c=0.61 id=28% cov=74%
---------------------------------------RYILLHKPEGFECTLKAKE-YPIVTDLIAVPElgsLRIAGRLDVDTTGALLISDDGGWLHRVTSPKHEHAKVYELTLADAMDSDaqanAIKEVAEGILLEG-----------DHEETKPATLEFI------DETHARLTLEQGKYHQVKRMMGYFGNRVVELHRASVGHITLDGLEKGDSRFLT-
>UniRef50_UPI0001C42CC7(109-281:322) hypothetical protein BpOF4_01845 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42CC7  E=2e-26 s/c=0.70 id=25% cov=53%
------------------------------------------------------------------------HAVNRLDRDTSGLLVVAKHGLAHDQLSkgQRAGKLKRYYLALAEGFVQPREGT-----IHAPIKRRPSSIIERMVAADGQEAITHYKVINDNQAYSEVEINLETGRTHQIRVHFAHLGHPLL-------------------------
>UniRef50_C0MA80(73-255:300) Pseudouridine synthase n=6 Tax=Streptococcus RepID=C0MA80_STRE4   E=5e-26 s/c=0.66 id=29% cov=56%
-------------------------------------------------------------------PNKQVHIVTRLDRDTSGLMLFAKHGYAHARLdkQLQQRAINKRYYALVCGQERLPDQGEIIAPI----GRTDDSIITRTVTPKGKYAKTSYKVIARYpENVSLVDITLHTGRTHQIRVHFAHLGFPLL-------------------------
>UniRef50_Q0C148(75-242:372) Ribosomal large subunit pseudouridine synthase F n=9 Tax=Alphaproteobacteria RepID=Q0C148_HYPNA  E=1e-25 s/c=0.70 id=37% cov=57%
-------------------------------------------------------------------------PLGRLDKDSHGLLILSEDGVLAKAIIGPLSDMDKEYLVKVRGDITTAKVALLRHGLELDGRQLRPAEVT-------------------QERGQVLRFVLKEGRNRQIRRMCELVELRVLDLQRIRVGPILLAGLPQGKWRPL--
>UniRef50_A6BL18(1-123:152) Pseudouridine synthase Rsu (Fragment) n=1 Tax=Leptolyngbya valderiana BDU 20041 RepID=A6BL18_9CYAN  E=3e-25 s/c=0.95 id=50% cov=57%
----------------------------------------------------------------------------------------------QHRLLDPKFGKSRAYWVQVERVPDEASLQRLRDGVTIRQYRTRPARVRRLAIAPDLPPRHPPIRFRKNVPTCWLEMSLTEGRNRQVRRMTAAVGHPTLRLVRVAVENLTLDALQPGQWRDLT-
>UniRef50_Q0F3G2(90-258:325) Possible pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G2_9PROT  E=3e-25 s/c=0.69 id=24% cov=52%
----------------------------------------------------------------------------RLDKDTSGSLVIAKSEVVHQRLseMFAEHNLNRQYIAWCRGVPSWR-----VKCIELPIGRHPHQRQKMAVTDSGRESITDAAVEHIFGPFSQMRLTLHTGRTHQIRVHMAHENLPVL-------------------------
>UniRef50_B8K915(6-192:254) Pseudouridine synthase n=5 Tax=Vibrio RepID=B8K915_VIBPA   E=2e-24 s/c=0.61 id=25% cov=54%
---------------------------------------------------------------------PDIQVVHRLDMDTSGLMLLAKHKEAERSLkkQFQYRLTHKVYYARVWGHPTNDNGEI--DLPLICDWPNRPRQIVCFDD--GKPSKTLYQVVKREERTSIVRLLPITGRSHQLRVHMQALGHP---------------------------
>UniRef50_D2M2K8(85-250:298) Pseudouridine synthase, RluA family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2K8_BACS4  E=2e-24 s/c=0.69 id=25% cov=68%
----------------------------------------VIIINKPPHLPTIPTRNEGEPSLAGAIlayyiengIPSTFHAVSRLDRDTSGLVMVAKHRYMHdlCVKLQKSYEIKRSYVALVEGILSDDY-----NTIDLPISRKTTSIIEREVNEFGKSAITHYEVLKRYSGATLLQLTLETGRTHQIRVHMSAIGHPLL-------------------------
>UniRef50_B9Y836(84-255:307) Pseudouridine synthase n=3 Tax=Firmicutes RepID=B9Y836_9FIRM   E=5e-24 s/c=0.66 id=23% cov=51%
----------------------------------------------------------------------------RIDKDTSGLIVACKNDNAHQSLAKQlaEKTAGRQYYALVHGVINHEYGT-----IDAPIGRDEKDRQKMaVTEKNSRPAITHFKVVERFDNYTLVSCRLETGRTHQIRVHMQYIGFP---------------------------
>UniRef50_A6FY13(26-236:238) Ribosomal large subunit pseudouridine synthase B n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY13_9DELT  E=5e-24 s/c=0.54 id=25% cov=80%
------------------------------------REHAHLMLHKPHGVVTARADGR-HPTAYALLEgaplFAELRAVGRLDLDAVGLLLWTTDGQLVHALTHPRRAVPRTYHVALAAPFEAPPRDDDgAVALELRDGLRP----RVVALGALDEAAAHPALLTPPGTEALATVTLLDGAYHEVKRIFAALGSHVLCLARVRHGPVELPrTLEAGAWQ----
>UniRef50_C3YH76(71-258:369) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YH76_BRAFL  E=5e-24 s/c=0.60 id=31% cov=24%
-----------------------------------------------------------------------LHPIHRLDRLTSGILIFAKNLETKHRLdaQIKGREVKKVYLARVEGEFPEKA------------------------------------------------------------------------------------------------
>UniRef50_D1BAB3(97-287:320) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1BAB3_THEAS  E=1e-23 s/c=0.58 id=23% cov=50%
----------------------------------------------------------------------------RLDATTSGLMVVARNGLAMEGLvrAFKDRRVGKVYLAMAAGTLRGEG------SVSLPIGRDPDNRKRMACVPWGREALTRYRVIWSRGGYSLVACQIKTGRTHQIRVHMRSLGHP---------------------------
>UniRef50_B4D302(58-247:289) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D302_9BACT  E=1e-23 s/c=0.58 id=21% cov=68%
----------------------------------------LLVIDKPPDLLTIASEAEQEKTVYfqlteylrgnDVHSRERVWIVHRLDRETSGIMVFAKTPQAKGLLQTGWDKAEKRYQAVIEGSLPNDKG-TFRSYL---DETDPFRVISVPRTPTTRHAVTHYRVLKRGKGRTLVELTLETGRRHQIRVHLADAGCP---------------------------
>UniRef50_C4FWV7(83-258:309) Pseudouridine synthase n=2 Tax=Firmicutes RepID=C4FWV7_9FIRM   E=2e-23 s/c=0.63 id=18% cov=51%
----------------------------------------------------------------------------RIDKDTSGLLVVAKHNAAHQALADQllNHDMRRSYIALVHGQVKAPQGT-----IEAPLQRDPANRLRWTVAKEGKYALTRFQVMENFENATLLDLELETGRTHQIRVHLEFIGHP---------------------------
>UniRef50_A9KNX9(77-292:346) Pseudouridine synthase n=21 Tax=Bacteria RepID=A9KNX9_CLOPH   E=2e-23 s/c=0.51 id=20% cov=85%
--RLFLAEETIESFK-ESYQLDAKVNQRAVKLDVLYEDSHVVIINKPIGMLSQRAKESDVSLVelliayllemgsltKEELSTFKPSVCNRLDRNTSGIVIAGKSLLGLQEMSakLQDRSLHKYYRCIVKGTMTKGAR---INGYLAKDEKTNKVRITTNDPNDGESSYieTEYQPILSKNGYTLLEVLLITGKTHQIRAHLSSIGHP---------------------------
>UniRef50_UPI00016C4782(17-247:275) RNA pseudouridylate synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4782  E=3e-23 s/c=0.48 id=25% cov=67%
----------------------------------------LVVIDKPSGLLTVATESEKLDTafvrLSDYLRARnagRPFVVHRLDRDTSGLLLFARSAEVRDQLQGNWEELTKTYLAVVEGRPESSEG-----GVEnyLTEGRDLRVRASPRPGPDGKRAASRYTVRQTRGGYSLVEVEIETGRKHQIRVHLAGLGCP---------------------------
>UniRef50_C0WQF4(51-247:297) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=C0WQF4_LACBU   E=5e-23 s/c=0.56 id=19% cov=53%
-----------------------------------------------------------------------IHIVTRLDKDTSGLVIFAKHHFAHSVLDKQlkDHQIKKTYLAIVEGTFSTTHFE-----IYLPIKRADGSLVKRQVGFPGKMSITEAWTKQRLRQHTLLKLQIHTGRTHQIRVHMTAIGHP---------------------------
>UniRef50_Q3A3D8(55-238:301) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=Q3A3D8_PELCD  E=6e-23 s/c=0.59 id=24% cov=54%
----------------------------------------------------------------------------RLDRDTSGVMIFSIHARAHKSLSdiFAARRVQKHYLALVAGCMQAPQGE-FRSLLARQHRTNLMKSVAR----GGKEAVTRYRVIEKFGDAELLEVEIPTGRSHQIRVHFAEAGHPLLGDIRY--------------------
>UniRef50_C5VRN0(85-247:302) Pseudouridine synthase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VRN0_CLOBO  E=8e-23 s/c=0.67 id=20% cov=53%
-----------------------------------------------------------------------VRLVNRLDMDTSGLVLIAKNAYSHMALSrdMQKDDFVKKYLAIVHGNFNEDSGV-----IDKPIYRVGEGTLKRIIDERGQRSITLFKVIEQYKNASLVELTLETGRTHQIRVHLSSIGHP---------------------------
>UniRef50_Q7RHI6(313-532:539) Putative RNA-binding protein n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RHI6_PLAYO  E=1e-22 s/c=0.49 id=25% cov=64%
--------------------------------------------------------EEEHKCMSYFIykninieKVNNLYVCGRLDANSSGLLIYTQDSIASSYLLNKyKYQVEKEYIITTFNEINECHLKMLKDNLFVDGKLIYKCHIQYVDS------------------FTLI-FKLYQGFHKIIRKICLLSNIKIRSLHRIRIGKIHLNNLPLGKWR----
>UniRef50_C8WWB4(61-261:303) Pseudouridine synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWB4_ALIAD  E=1e-22 s/c=0.54 id=24% cov=67%
----------------------------------------IVAVNKPVGVLTHPADGEYKTSLAAQVEAYvydrgaregafRAAPVHRLDRNTSGVVVFAKTarAAKAWADAFHRGEVEKEYLAIVEGEWSGRG--RVAVDVRREGNVTR------VVDDSGKPSETAYEVVASSRGTSLVRLHLLTGRTHQIRVHMAHLGHPLL-------------------------
>UniRef50_D2QJH0(51-272:308) Pseudouridine synthase, RluA family n=3 Tax=Bacteria RepID=D2QJH0_9SPHI  E=1e-22 s/c=0.49 id=21% cov=68%
----------------------------------------LIVINKQAGLLSMATNKERDRTAYGILseytkkenPKNKIFIIHRLDRETSGVMMFAKSEKVQRLMQESWNATTKErtYVALVEGIPEPPQGTITS---YLRESKALIV-YSSQNPDTGQLSITNYTVTKTGNGYALLELELETGRKNQIRVHMQDIGHP---------------------------
>UniRef50_Q03EW7(30-198:253) Pseudouridine synthase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EW7_PEDPA  E=1e-22 s/c=0.64 id=21% cov=54%
-----------------------------------------------------------------------VHVVTRLDQDTSGLVIFAKHRFAHTVMDQdlRQRKINKMYLTIVEGTFTNQHG-IIETPIQRD--PDSFIKRMVAPMGEGKPSLTEYWVEDTFKNFTLLKVKLHSGRTHQIRVHFSSIGHP---------------------------
>UniRef50_C7H3U7(79-255:305) Pseudouridine synthase n=2 Tax=Ruminococcaceae RepID=C7H3U7_9FIRM   E=1e-22 s/c=0.61 id=23% cov=51%
------------------------------------------------------------------------RPVNRIDKDTSGLVLAAKNGYAAPLLAE---GVEKLYYAIVEGELPLGPGV-----IDAPIGRRGDSIIGRCVTPEGKPSRTEYTILRAAQGLSLAACVPVTGRTHQIRAHFASIGHP---------------------------
>UniRef50_C9RQF0(80-249:424) Pseudouridine synthase, RluA family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQF0_FIBSS  E=2e-22 s/c=0.63 id=23% cov=51%
----------------------------------------------------------------------------RLDKDTPGLMVVAKNDAAHRHLAHQleTRTLHRTYNALVWGCP-----RDLEGTIDAPIGRNPKNRLKMAVVKGGKESRTHYVAKQFFAIATLLELQLESGRTHQIRVHSRYTGHP---------------------------
>UniRef50_C7LR44(18-189:243) Pseudouridine synthase n=6 Tax=Bacteria RepID=C7LR44_DESBD   E=3e-22 s/c=0.62 id=23% cov=68%
----------------------------------------IIVVNKPAGMLTMATETEKTRTayyaLTDYVRKgnaksrYRIFIVHRLDRETSGIVLFAKTEVAKRTLQDQWEDTTKIYAAVVHGQMGKASGMLSSHLVESGVHKVYATR----DAALGKLARTAWTVLKERGGYSLLDVTLLTGRKHQIRVQMADAGHP---------------------------
>UniRef50_A5ZUU7(62-244:293) Pseudouridine synthase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUU7_9FIRM  E=3e-22 s/c=0.58 id=31% cov=36%
----------------------------------------ILVVNKPADMPVHPSLGNYTNTLANgvaaYLETKGescpFRCINRLDRDTSGALILAKNALSAAILsvQMRNRQISRTYLAVVEGIP----------------------------------------------------------------------------------------------------
>UniRef50_Q0F3G4(65-288:315) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G4_9PROT  E=5e-22 s/c=0.47 id=24% cov=68%
----------------------------------------LLVVNKPAGMVVHGGSGHEAGLIEALKQSRGlddLRLAHRLDRDTSGVLLMAKHLDALRRLTesFRERDMQKTYFALIAGHPYAHAGRMssnLAKGVVRGGER------MVVDSEEGKASVTDYQVmieyERHGFPYAMVALNPHSGRTHQLRVQLQHEGHPIL-------------------------
>UniRef50_Q6MND5(12-178:228) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND5_BDEBA  E=6e-22 s/c=0.63 id=27% cov=33%
-----------------------------------------LVINKPSGVSVHNDPPDVRTLLKKQLTPgtyQDIHPVHRLDKETSGLLLVGLDAETAANLsgQFQEHKVEKTYYA----------------------------------------------------------------------------------------------------------
>UniRef50_B5JL25(15-189:249) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL25_9BACT  E=8e-22 s/c=0.60 id=24% cov=70%
---------------------------------------RLVAIHKPSGLLVHRSPIDRRETrfaiqlLRDQIGQ-HVYPAHRIDRPTSGILLFGLDEAAgtALSLLFQNREIQKNYLAVTRGHLPESGLIDspLHKYEDADGHIKSSETQEAETAYRRLATTELPYPTERYDttRYSLVELTPHTGRRHQIRRHLAHIRHP---------------------------
>UniRef50_P59838(54-267:321) Ribosomal large subunit pseudouridine synthase D n=3 Tax=Gammaproteobacteria RepID=RLUD_BLOFL  E=1e-21 s/c=0.49 id=22% cov=52%
-------------------------------------------------------------------------IVQRLDKDTTGLMIIAKTVSAYDNLLrsFKLRKVVKEYDAIVYGKFTSNA------GVVNQPMRRHFAKRTFMSvHYTGKSAVTYYSVVEEFKAHSRVRINLKTGRTHQIRVHMAYINHP---------------------------
>UniRef50_A1ALH6(70-244:306) Pseudouridine synthase, RluA family n=9 Tax=Desulfuromonadales RepID=A1ALH6_PELPD  E=2e-21 s/c=0.59 id=27% cov=36%
----------------------------------------LIALNKPAGVNTQRTPYQLKGTLEYWAseyfrrqgNPEPARVIHRLDRGTSGVMLFPKHKRAAAWLSKRFHdgQVEKRYLALVSGTP----------------------------------------------------------------------------------------------------
>UniRef50_A0L8J2(107-269:328) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8J2_MAGSM  E=2e-21 s/c=0.64 id=24% cov=52%
----------------------------------------------------------------------------RLDKETSGLLLFGLRPRAVRLLTEamRENQVTKTYLTLVQGVPAARQGVINQ---PLSKGNVRGGERMVVVEQGGQRAVTHYRVLRSYGVASLLEVQLETGRTHQIRVHMQWLGHP---------------------------
>UniRef50_C8PQT2(12-195:246) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQT2_9SPIO  E=2e-21 s/c=0.57 id=20% cov=53%
-----------------------------------------------------------------------LYAVHRIDKDTSGILLYALNAEAHRTLntAFQNREIKKTYRLLIHGRVSEEQFTV-DLPLRADGDALHR---TVVDKRRGKEAVTHFTVLETFRQFSLLEACPVTGRTHQIRAHLAAAGYP---------------------------
>UniRef50_C7LP91(14-174:245) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP91_DESBD  E=4e-21 s/c=0.64 id=21% cov=53%
-----------------------------------------------------------------------LYPVHRLDRPTSGLMIMALSPQAAHalALQFASQEVHKTYLAVTRGFVPPQGLIDDA----LKSESGSLQEARTEFTRLATAEIPHPVGPNPTARYSMVRVRPRTGRTHQIRRHFAHIRHP---------------------------
>UniRef50_C1ZCX9(17-192:269) 23S RNA-specific pseudouridylate synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCX9_PLALI  E=5e-21 s/c=0.59 id=37% cov=21%
----------------------------------------------------------------------------RLDRPVSGVMLFARNSKAAARLAevFRDRRVKKTYTAVVEGMPPQTT------------------------------------------------------------------------------------------------
>UniRef50_B6BTN1(58-252:346) Pseudouridine synthase n=2 Tax=Betaproteobacteria RepID=B6BTN1_9PROT  E=5e-21 s/c=0.53 id=27% cov=27%
----------------------------------------ILVLNKPYNLVVHPGSGNANGTLLngllyynkDLEKLPRGGIVHRLDKDTTGLMVVAKNEESQNNL-----------------------------------------------------------------------------------------------------------------------
>UniRef50_D2R4N0(89-259:313) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4N0_9PLAN  E=9e-21 s/c=0.60 id=25% cov=50%
----------------------------------------------------------------------------RLDRGVSGLLIFGKTTELAQMLrdQFAMHKPEREYVAIVRGKLDKPEGMIesfLATDRDLNRYSTD-------DESIGQHAVTHYRVIEELAGASVVQVWLETGRRNQIRVHFAEAGHP---------------------------
>UniRef50_UPI0001AEC02F(22-218:279) pseudouridylate synthase, 23S RNA-specific n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC02F  E=9e-21 s/c=0.52 id=25% cov=71%
------------------------------------QDEHIIAIEKPPGLLVHRSPIDRHETVFavqtlrDQIGQ-HVYPAHRLDRPTSGVLVFSFSSEIAAKLGQQmmDKQVVKTYHAIVRGFVHHTGYIDYAlkyRYDKIADKHKRPQQppqpASTMYQSVAKFEVPEPVGKYQSARYSLVKLSPSTGRKHQLRRHMVHIRHP---------------------------
>UniRef50_B6IR13(9-175:242) Pseudouridine synthase n=1 Tax=Rhodospirillum centenum SW RepID=B6IR13_RHOCS  E=1e-20 s/c=0.60 id=31% cov=53%
--------------------------------------------------------------------------AHRLDKDTSGCLVLARDAEVAARLgrLFLHGHVGKTYWAVVLGRPRGDAGRIDLPLLKVHI----PGCSKVVVDPDGKPALTDWRLLATDGRLSWLELTPRTGRMHQLRAHCACSGFPIL-------------------------
>UniRef50_A1U1A1(62-230:267) Pseudouridine synthase n=2 Tax=Marinobacter RepID=A1U1A1_MARAV   E=1e-20 s/c=0.60 id=25% cov=71%
--------------------IQLFYDDQVLARKPEtptllENKGRYSVWFKPHGLLSQGSQWGDHCSLLRLAEIElntPCFLVHRLDADAAGLMLIAHDGKAAAALseLFAGRAMTKIYRARVAGNLMADDLR-LDTPLDGKDSISRVTTLSR----------------DEDSDTTDVQVRIETGRKHQIRRHLAGIGHP---------------------------
>UniRef50_Q6MEC0(89-264:318) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEC0_PARUW  E=2e-20 s/c=0.57 id=24% cov=51%
----------------------------------------------------------------------------RLDKGTSGLLVAAKTLETQQKLieLFASRKVYKAYLAICIGRPADGEIQA-------PIGRHPIHRKQMAVIPTGKPAISFCKTLGWSDKLSFVQIEIATGRTHQIRVHMKYRGSPIL-------------------------
>UniRef50_D1Y726(94-262:315) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y726_9BACT  E=3e-20 s/c=0.59 id=27% cov=51%
----------------------------------------------------------------------------RLDRNTSGVMALALDGPTTRALMecFKARRADKRYWAIVIGELPERG----RIDVPL---LKDADKKLVRVDPKGERAVTEYKRLTSSGAFSLAEVHLLTGRTHQIRVHMNHVGHPLL-------------------------
>UniRef50_Q7UUI8(64-264:321) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UUI8_RHOBA  E=4e-20 s/c=0.50 id=24% cov=67%
----------------------------------------IIVVNKSAGTLTVPTDRGEPNSLVDRVsiylsyskSKKEAFVVHRLDRETSGLLVFGKHEPIADLLieQFKDRRPTRVFHAIVAGNVSEDEGTFeshLATGSNLDRYETRP-------GKDTDQAITHYKVVRRlaeresshGEETTLIEAQLETSKRNQVRVQFANAGHPVL-------------------------
>UniRef50_A8SAJ4(82-258:303) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAJ4_9FIRM  E=4e-20 s/c=0.56 id=19% cov=53%
---------------------------------------------------------------------PVFRPVNRIDKDTSGLVLAAKNAYAAPLLA---GGVTKLYYAIAQGALPLGEGA-----IDAPIGRRGDSIIGRCVTPEGKPSRTEYTIIKEENGLSLAACVPVTGRTHQIRVHFASIGHP---------------------------
>UniRef50_A4WSV2(95-296:349) Pseudouridine synthase n=41 Tax=Alphaproteobacteria RepID=A4WSV2_RHOS5  E=4e-20 s/c=0.50 id=23% cov=52%
----------------------------------------------------------------------------RIDKDTSGLLVVAKTDRAHQGLaaQFEAHTVERRYLALVHGvpEPSDPRLRGIR-GVSFEPGgvlriatgiaRHRTDRQRqAVTFEGGRHAVTRARLLERFGtppAAALVECRLETGRTHQIRVHMSHVGH----------------------------
>UniRef50_C7MES4(105-266:318) Pseudouridine synthase, RluA family n=5 Tax=Actinomycetales RepID=C7MES4_BRAFD  E=8e-20 s/c=0.61 id=23% cov=53%
---------------------------------------------------------------------PDLELIHRLDRSTSGVLALAKSPSMLRYLHdllrDREDEIERRYLALVAGHWPAET--------TILDAPLRREENRVVVDPDGQRAETHVAVaQRFGNRATLLEVRLLTGRKHQIRVHLQHAGHP---------------------------
>UniRef50_A1AT77(80-249:310) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=A1AT77_PELPD  E=9e-20 s/c=0.58 id=23% cov=50%
-----------------------------------------------------------------------LYPVNRLDRGTSGAVILAKSSTAAGIFGRQvkETGLDKLYLALVAGRPDGAGV--------------------IDAPLDGKECRTDYRLLAQGCGFSLLELLPFSGRMHQIRRHLEMIGHPILGDQRYS-------------------
>UniRef50_A9BZ16(56-230:319) Pseudouridine synthase n=9 Tax=Burkholderiales RepID=A9BZ16_DELAS   E=1e-19 s/c=0.57 id=28% cov=55%
----------------------------------------------------------------------HVYPAHRLDKGTCGVLVMALHAQAAQRLgqAFAGQEVRKQYLALVRGWLPDavEVDHALRPDDAPEDAPAQPAQTS-LRCLARLEWPEAFDPRHAATRISLVEALPATGRRHQIRRHLKHVAHP---------------------------
>UniRef50_A9CFZ5(20-188:222) Pseudouridine synthase n=3 Tax=Rhizobiales RepID=A9CFZ5_AGRT5   E=1e-19 s/c=0.59 id=24% cov=52%
----------------------------------------------------------------------------RLDKDTSGIVLMSLNRKAHAAIaaQFEKRETRKSYVAIVWGTVAGEEGEvDLPLAIDPDNKPRH-----RVDHENGKPAQSLWRVLERlPLPATRLALTPLTGRTHQLRVHMKALGHPIL-------------------------
>UniRef50_D0RNQ1(80-247:288) Pseudouridine synthase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNQ1_9RICK  E=1e-19 s/c=0.59 id=22% cov=62%
----------------------------------------YCVLNKPYGYASQ-DGSKVKLSVIDILNstKKNYYIVHRLDKDTSGLMLLAKNRFYAKKFseMFKSREVKKKYLVIINGKIKKNKGEI---------------HSKEKVNGKEIESKLYFEVISKKNNFSYLEIDLITGRKHQIRKQFSDIGHP---------------------------
>UniRef50_B3E6K8(63-250:300) Pseudouridine synthase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6K8_GEOLS  E=2e-19 s/c=0.52 id=24% cov=56%
------------------------------------------------------------------------YPVNRLDRGTSGVVLLATSSSNAGILGRQvkEEGLDKIYLTVVEGML--EGIGEISQPLD------------------GKESISRYRSLSVGESCSFLLVEPVTGRTHQIRRHLSAIGHPVLGDKRYDAQPLaTLPGIALHSFR----
>UniRef50_Q2G4F0(98-273:436) Pseudouridine synthase n=12 Tax=Alphaproteobacteria RepID=Q2G4F0_NOVAD  E=2e-19 s/c=0.56 id=22% cov=68%
-----------------------------------------IVLNKPPGLATQggsGTHEHVDGLLDAYVNEGEARPrlVHRLDKDTSGVLLIARTPGSAAFFSKRFscRSARKIYWALVVGVPDVKDG--LIELPLAKQPGTGGEKMMVDESGQGQSARSRYRVIsRAGNAAAWVELQPLTGRTHQLRVHMAAIGHP---------------------------
>UniRef50_C6E472(63-240:302) Pseudouridine synthase n=4 Tax=Geobacter RepID=C6E472_GEOSM   E=2e-19 s/c=0.55 id=20% cov=61%
----------------------------------------IISLNKAPGLSVHRTEDPDEVNLVDLAEtllqkrdgVGRLRPVNRLDKGTSGAIILAKSAVAAGMFgkMVQEEGLGKLYLALVEGKLQKQGV--------------------IDAPLDGKESQTSYLRLFHGGGVSLLAVYPITGRMHQIRQHFKMIGHPIL-------------------------
>UniRef50_A0C2P1(99-274:469) Chromosome undetermined scaffold_145, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0C2P1_PARTE  E=2e-19 s/c=0.56 id=24% cov=56%
-----------------------------------------------------------------------LYVLHRLDRLTSGLLIFSKNRLLAQKFHDANSKlnVQKTYLARVQGNFSEDIKEnnKPQYCVSMKDAIFACCTEEDAQKLDAKSATTKFEKlwYDPISDSSLLECKPITGRTHQIRVHLADLGHPIL-------------------------
>UniRef50_Q7NBQ4(83-249:312) Pseudouridine synthase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBQ4_MYCGA  E=4e-19 s/c=0.58 id=40% cov=24%
----------------------------------------LIIVNKPTNMLSHPTTHNEPDTLLNCLmyhnKKQKVYLAHRLDKDTTGLIVATKN------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B8C425(265-416:441) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C425_THAPS  E=9e-19 s/c=0.63 id=31% cov=66%
--------------------------------------------------------------------------AGRLDIDSTGVIIFTRAGIMARRLIAPDTKIPKEYIVKVQPAVQPTTHEK-EAGLLSLPSPTRnltsllRGGKRLWNDKKALKPVLEAEWLEENPVLSnggTLRLVLQEGKKRQIRRMCrEILGMHVVSLVRKSIGPIQLDTLPEGKWRPLKE
>UniRef50_C5WJF2(112-296:341) Pseudouridine synthase n=104 Tax=Lactobacillales RepID=C5WJF2_STRDG   E=1e-18 s/c=0.52 id=19% cov=35%
----------------------------------------LIIVNKPEGMKTHGNEPTELALLnhVSAYTGRTCYVVHRLDMETSGVIVFAKTPFILPILnrLLEKREISRDYWALVHGT-----------------------------------------------------------------------------------------------------
>UniRef50_C6C294(54-252:292) Pseudouridine synthase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C294_DESAD  E=1e-18 s/c=0.48 id=25% cov=53%
-------------------------------------------------------------------------PAHRLDRDTSGVILAGKSHQGQKDLSDFFAEHgegGKFYLAEVEGRWPEEDWVELHDKMEKSGSKGR----EKVVVGSGKDASSSVCPVTIGEKSSLLIVKLHTGRTHQIRVQLSSRGFP---------------------------
>UniRef50_A0Z298(103-270:320) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z298_9GAMM  E=1e-18 s/c=0.57 id=21% cov=53%
----------------------------------------------------------------------------RLDRDTSGLLLVARRASTLRNLhvLLRSNGIDKRYLCLVNGRWPAHLKRVDA---PLEKFALPSGERRVKVAATGRQSLTTFRVVRRWSSATLVEAKPVTGRTHQIRVHCQHAGFPIL-------------------------
>UniRef50_B6BNM7(79-259:325) Ribosomal large subunit pseudouridine synthase, RluA family n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNM7_9PROT  E=3e-18 s/c=0.52 id=25% cov=28%
----------------------------------------VLVINKPSGVTVHPAPSVKEATLVDWLKHKGIRlsnisgeerhgIVHRLDKGTSGTMVVAKNNEAHEFLSE---------------------------------------------------------------------------------------------------------------------
>UniRef50_D1AYL9(53-257:280) Pseudouridine synthase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYL9_STRM9  E=4e-18 s/c=0.46 id=23% cov=67%
----------------------------------------VFIINKPNNMPMHKGDKHKfglSETAKAYYNNPNVNFANRLDLETEGLVIGCKNLQILRKVNEeiRNKKIIKRYIAKVE----QKKLQLDEE--FFSDKKIKIFEDRVRVSKDGLEAKTYFKVIEVKDFKVLLDIELITGRKHQIRVHLSDIGHP---------------------------
>UniRef50_B1JD90(48-246:252) RNA-binding S4 domain protein n=5 Tax=Pseudomonas RepID=B1JD90_PSEPW  E=5e-18 s/c=0.47 id=28% cov=55%
-----------------------------------------------------------------------------LERGASGLQVFTQDWRVTRKIEADLRRLEQEYIIEVRGETTPQALERLARGATRNDRELPKAKASWQNE-------------------THLRLALKNPQPGQISEICAYLRLEILSMRRIRLGGVSMGKLPVGNWRYL--
>UniRef50_Q1WS43(44-245:296) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=Q1WS43_LACS1   E=7e-18 s/c=0.46 id=31% cov=22%
------------------------------------------------------------------------HVITRLDRDTSGLVLVAKHRFAQGLINKQveEHSIDKKYLAVVEGIITE--------------------------------------------------------------------------------------------------
>UniRef50_Q1QTG8(9-177:261) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q1QTG8_CHRSD  E=8e-18 s/c=0.55 id=30% cov=24%
----------------------------------------------------------------------HVYPVHRLDRPTSGLLLFALDPEMAQALgeEFTAHRVHKRYLAVVRGVGPEQDL-----------------------------------------------------------------------------------------------
>UniRef50_C8W9Q3(14-193:246) Pseudouridine synthase n=2 Tax=Atopobium RepID=C8W9Q3_ATOPD   E=1e-17 s/c=0.51 id=22% cov=57%
------------------------------------------------------------------IDLSQVQALNRLDKETTGIVLFSLKKETQPQFDQliASKELSKEYLAVVKGDFGLNKL-LIDKAIGKDRHDAQKMRISDTGKPSQTEVRLIKVASSAQGQIqSLLLVNLLTGRKHQIRVHLSSLGFP---------------------------
>UniRef50_C8PW17(120-319:365) Pseudouridine synthase n=5 Tax=Moraxellaceae RepID=C8PW17_9GAMM   E=1e-17 s/c=0.46 id=21% cov=53%
----------------------------------------------------------------------------RIDKDTSGLLMIAKKRSTLKTLQEhlREKTLQKTYLCLVVGWISSET-QTIDKPLLKytlpatQEGKSGERRVKVdVKSEDSKPSQTQINVLQKfelnGQKVSLIEAKPLTGRTHQIRVHLASIGHPLL-------------------------
>UniRef50_C8PSH6(8-205:240) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSH6_9SPIO  E=1e-17 s/c=0.46 id=20% cov=54%
------------------------------------------------------------------------FAVHRLDRDTSGVMLFALNERTKDEFMRSWHTLvtERIYRA-VAENPAEGGLAdsgIIDAPLAYNAYNRAFVpTAEKHAHFDTVAARTRYKIIERGAAYTLFELSLDTGKKNQIRAHLAANGYP---------------------------
>UniRef50_Q67N67(75-268:327) Pseudouridine synthase n=1 Tax=Symbiobacterium thermophilum RepID=Q67N67_SYMTH  E=3e-17 s/c=0.47 id=22% cov=58%
--------------------------------------------------------------------DPVARPVQRIDRETSGLVLFAKDPAVAGLLARelERQKLERRYvavvegaVAADAGTVDRPIRRVWGHPVAREvaEGPRTPEQERLLAEaaaqgralredwtAAGQPAVTHWRVLRRWPAATMLELRLETGRTHQIRVHMAYLGHPLL-------------------------
>UniRef50_A5DTZ4(55-287:430) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DTZ4_LODEL  E=8e-17 s/c=0.38 id=24% cov=35%
----------------------------------------IIVIDKPSGIPVHPTGSYMFNSLSEIVKEmfnfDNIWTCHRLDKVTSGVVILCKNRDAAvkflNILLEKSDKVKKIYLARVNG------------------------------------------------------------------------------------------------------
>UniRef50_C8PZW5(3-210:266) Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZW5_9GAMM  E=1e-16 s/c=0.43 id=28% cov=54%
-----------------------------------------------------------------------VYPIHRLDRPTSGVLLFALSSESARQLCEQfeNRQVQKSYLAIVRGYLTvnaqtsgliDYPLTQILD--KIGDKPSLQAlqqrkvsstdmFAEALSSPAEltllQPAQTHWqclatteqpfqaRARYPTSRFSLARLTPITGRKHQLRRHMKHVFHP---------------------------
>UniRef50_B3T0Q8(72-265:320) Putative RNA pseudouridylate synthase n=2 Tax=prokaryotic environmental samples RepID=B3T0Q8_9ZZZZ  E=5e-16 s/c=0.45 id=21% cov=57%
----------------------------------------------------------------------------RLDKDTSGCLLVSKKKSKLRKLHeyFREGKVKKTYLGLMVGKFTQTVYEIDQ---PLKIITTPENGRLAVPDDSGKKAKTKFFLMEKYKNSALFKIEPITGKTHQIRAHAKYMKTPLAADNRYGIQP----------------
>UniRef50_B1Y046(46-215:256) Pseudouridine synthase n=43 Tax=Proteobacteria RepID=B1Y046_LEPCP   E=1e-15 s/c=0.50 id=25% cov=57%
---------------------------------------------------------------------PDALIVHRLDMATSGLMVMARGPAAQRALgsAFEHRSVTKQYVAVVAGDVAGDAGsVDLPLCADWPNRPRQKVDAAMGRPSLTHWRRATPAHEGSttgDIDRTRLELEPVTGRSHQLRVHLLALGHPIL-------------------------
>UniRef50_Q3A211(62-244:296) 23S RNA-specific pseudouridylate synthase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A211_PELCD  E=1e-15 s/c=0.47 id=20% cov=47%
-------------------------------------------------------------------------PVHRLDIGTSGPVIFGKGRKATAELgrLLQNGHMSKTYLALVNGHPPETGM----------------MVTSVRVQGKPKQAATRFRVLGRHASAALLELELLSGRKHQIRQQCADAGWP---------------------------
>UniRef50_B7APK6(2-189:217) Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APK6_9BACE  E=1e-15 s/c=0.45 id=28% cov=51%
----------------------------------------------------------------------------RLDRPVEGLMVFAKssrDAARLNRLMQQD-TFNKTYIAVVWGCI--DAVEGTLTDYLVKDAGNNTSHVASEGEPGAKRAELNYRVIGSLDGMSVVRIQLVTGRHHQIRVQFASRGH----------------------------
>UniRef50_UPI0001BCE125(1-128:163) pseudouridine synthase, Rsu:RNA-binding S4:pseudouridine synthase n=1 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCE125  E=2e-15 s/c=0.66 id=36% cov=23%
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------LTVIINEGQNRELRRFLGYYDLEVMDLNRVSFGRVSLDQLGEGKWRYFT-
>UniRef50_UPI00016C4D9D(126-286:354) pseudouridine synthase, RluA family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4D9D  E=3e-15 s/c=0.52 id=34% cov=24%
-------------------------------------------------------------------PDRAVTAVHRLDRDTSGLVVFARTRAAGENLTaqFRKHSTERRYLALTRGVPKP--------------------------------------------------------------------------------------------------
>UniRef50_Q7Z110(97-276:350) Chromosome undetermined scaffold_37, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=Q7Z110_PARTE  E=6e-15 s/c=0.46 id=23% cov=51%
------------------------------------------------------------------------YIIHRLDQLTSGLLIIAKNKDIAteiSTIIQEKAFITKKYIAVVQGQIKVQKGLIDRPLLFNTNNQKQTCyNEEQLLEGKYLPARTSYEVIEEyqyqDEMYSILDLQIFEGRKHQIR------------------------------------
>UniRef50_C4XKF0(89-244:290) Putative pseudouridine synthase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKF0_DESMR  E=1e-14 s/c=0.53 id=32% cov=22%
----------------------------------------YVLLNKPSGLhsaaLAQGGGESVEALLPDIFPGRPSFLLSRLDSLTTGLL-----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A3U5W9(49-240:283) Pseudouridine synthase n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U5W9_9FLAO  E=3e-14 s/c=0.42 id=25% cov=47%
-------------------------------------------------------------------------PIHRLDNPTSGVLVVAKTKSSQINLNKQleLKGIQKTYIAVVHNTPDSNML--FNDNI---DGKESESKLEIIKTFKVK-----------DDIYSLVELFPKTGRTHQLRIHTSKAGYP---------------------------
>UniRef50_D2M3P6(22-252:300) Pseudouridine synthase n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M3P6_RHOPA  E=1e-13 s/c=0.34 id=31% cov=52%
--------------------------------------------------------------------------AHRLDRDTSGCLVLGRHRKATATlgLLFKHSRISKTYWAIVEGGPAEDEGS-----IDLPIGKLNAERgwWQKIDQESGLPSLTKWRVMGRSSPpvcgdgsgvgahsgtpslgrphpgplpqagegalsagakgddlsrkpgaksgapppaqLTWLALEPITGRTHQLRVHCAAMGWP---------------------------
>UniRef50_B0SSX5(17-177:231) Pseudouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SSX5_LEPBP  E=4e-13 s/c=0.48 id=24% cov=27%
------------------------------------------------------------RLLSNHLQIPELRTVNRLDLGTSGIVLLGKNKNKNVELDLLLKEAEKTYIFLCDGIP----------------------------------------------------------------------------------------------------
>UniRef50_Q1QR55(14-226:292) Pseudouridine synthase n=4 Tax=Bradyrhizobiaceae RepID=Q1QR55_NITHX   E=6e-13 s/c=0.36 id=31% cov=54%
--------------------------------------------------------------------------AHRLDRDTSGCLVLGRHRKATASlgLLFKHGKISKTYWAVVEGGPTEDEGtidiplgrlnhergwwqkpdpnglpsvtrwKVLGRGIFTaasDRFSPSPCGVEtsearpegagaRGNSDGIAPDHPPPRAREEGIQLTWLALEPVTGRTHQLRVHCAAMRWP---------------------------
>UniRef50_Q8ZPZ1(1-217:221) Ribosomal large subunit pseudouridine synthase E n=30 Tax=Enterobacteriaceae RepID=RLUE_SALTY  E=2e-62 s/c=1.11 id=82% cov=100%
MRQLISSENTMQKTSFRNHYVKRFSSRQASKSRKENQPKRVVLFNKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRLDRDSEGLLVLTNDGALQARLTQPGKRTGKIYYVQVEGIPDNAALQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRERKNIPTSWLKVTLYEGRNRQVRRMTAHVGHPTLRLIRYSMGDYTLNGLDNGQWREIAQ
>UniRef50_B2RK43(243-427:439) Pseudouridine synthase n=1 Tax=Porphyromonas gingivalis ATCC 33277 RepID=B2RK43_PORG3  E=1e-40 s/c=0.91 id=30% cov=79%
-------------------------------KRVEIESKVYVLLNKPKNCVTTSDDPECRTTVMDIVRyacPERIYPVGRLDRNTTGVLLITNDGDLASKLTHPSFKKKKIYHVWLNKDVSIEDMQKIADGVELDDGEIHADAISYVKE----------------DDLSQVGIEIHSGRNRIVRRLFEHLGYRVVKLDRVYFAGLTKKNLPRGKWRYLNE
>UniRef50_D2QMI8(442-626:638) RNA-binding S4 domain protein n=16 Tax=Bacteroidetes RepID=D2QMI8_9SPHI  E=2e-40 s/c=0.90 id=36% cov=72%
----------------------------------------YVLLNKPKDYITTTEDPEERKTVMELVADAgkfRMYPVGRLDRNTTGLLLITNDGELADKLTHPSNNIRKIYQVELDKPITDEHFEAIKKGIELEDGPIKPDAISIVTPDAY-----------------VVGIEIHSGRNRIVRRIFESFGYEVTKLDRTTYAGLTKKELPRGKWR----
>UniRef50_C4Z9Y4(38-237:250) Pseudouridine synthase n=16 Tax=Bacteria RepID=C4Z9Y4_EUBR3   E=1e-39 s/c=0.82 id=35% cov=76%
------------------------------------QRYEYYLFNKPSGCVSATCDN-VHDTVMDYITDavhDDLFPVGRLDIDTEGLLLITNDGALSHELLSPSKHVAKTYYARIDGEVTLDDIIRFKEGIDIgEEKPTKPAEL----------------VIKKSGSVSEIELTITEGKFHQVKRMFEALGKRVIYLKRISMGPLKLpDDLKTGTYRALTQ
>UniRef50_Q38VQ0(26-226:239) Pseudouridine synthase n=6 Tax=Lactobacillus RepID=Q38VQ0_LACSS   E=2e-39 s/c=0.82 id=33% cov=75%
----------------------------------------YWLLNKPAGVISATTDPQ--KTVMDLFAPadyrEDLFPVGRLDKDTTGLLLITNDGDLAHDLLSPKKHVAKTYRAKIAGVVTAADQAQFAAGLKLRDFDAQPAQLTILRTDTARQE-------------SLIEVEIHEGKFHQVKRMFHAVGKEVLTLERIKMGPLSLPaDLKRGQYRALT-
>UniRef50_C8NZC3(32-230:246) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZC3_ERYRH  E=3e-39 s/c=0.82 id=33% cov=75%
----------------------------------------YYILNKPRGIVSSANDDKDRESVVDLVPNDiRVFPVGRLDRETTGALILTNDGDFAYYMTHPKFDLSKIYRVSVRGRLSYEVTNSLKEGITIEGVEYKGVEISRV-------------KYDAAKDKTQFSITLHEGKNRQIRKIFAHFGLPVLKLHRYQIGYLDIDELKIGQYREL--
>UniRef50_A3HY40(241-424:434) Pseudouridine synthase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HY40_9SPHI  E=6e-39 s/c=0.88 id=29% cov=84%
-------------------KVSKFDRVVYQGKKINPEKPVYVLLNKPKDFITTTDDPLERKTVMALVGnacEERIFPVGRLDRNTTGLLLFTNDGELAAKLSHPSNQIKKIYQVTLDKPLTHNDEKDILEGLTLEDGEVEVDDMQVLSVDRKI-----------------LGLEIHVGKNRIVRRIFAHLGYEVTALDRVMYAGLDKKDLKRGNYRFLSE
>UniRef50_C1ZE67(84-261:554) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZE67_PLALI  E=1e-38 s/c=0.90 id=35% cov=76%
--------------------------------------KRYFLFHKPAGVLCTNSDPAGRTRVIDCFPPNvgRLFTVGRLDDGTEGLLIVTNDGDLAERLTHPKFGIPRIYRAVVAGNPSTEAINQLLEGLYFAEGRFRMSSVNRV---------------KSQGSATVLEITMREGQNREIRRLLARVGHKVMKLKRTHFGPIKLGDLERGAHRKLSE
>UniRef50_B2V6W2(29-230:244) Pseudouridine synthase n=5 Tax=Bacteria RepID=B2V6W2_SULSY   E=2e-38 s/c=0.80 id=33% cov=76%
----------------------------------------YFMLNKPAGYITATEDEE-YPTVLDLFSDlpiaSKLFPVGRLDIDTEGLLILTTDGQFGHRLSHPKWNIEKEYYAIVEGDISNiDFSESENKGIYLKKEKYQTKPFKV-------------KVLNTSKDKSEILITLTEGKYHIVKRIMQELGYPVLYLKRIRIGNLKLDeDLLPGEFRELTE
>UniRef50_Q042N1(46-240:245) Pseudouridine synthase n=3 Tax=Lactobacillus gasseri RepID=Q042N1_LACGA  E=1e-36 s/c=0.79 id=32% cov=77%
------------------------------------QQYHYFLLNKPKGVISATEDRSQ-QTVISLLKTKdryqGIAPVGRLDKDTTGLLLLTNDGALAHELLAPNKHVAKVYRAKIAGVPDPETAKKFAQGLILGDGTKL------------KPAKLKILKQDQDNNLSQIEIQIQEGKYHQIKRMFGAVGMKVLELDRVSMGKLHLPaDLKRGEYKEI--
>UniRef50_D0U645(64-225:237) Pseudouridine synthase n=1 Tax=uncultured actinobacterium RepID=D0U645_9ACTN  E=7e-36 s/c=0.94 id=36% cov=73%
----------------------------------------YLALHKPKGVLSTMFDPEGRPSLDDFIDlrKERLFHVGRLDKDSEGLILLTNDGDLTFRATHPSFGLEKTYIIEFDGILPTGVDKVLLKGVELEDGMGRVLTFKQLSPK-------------------WIEVSIHEGRYHIIRRLMEAVGVNVLRLIRTKFGPISLGDTPEGRWRDLND
>UniRef50_Q2LSY4(44-226:251) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSY4_SYNAS  E=1e-35 s/c=0.83 id=36% cov=73%
----------------------------------------YVMLNKPRGYVTALSDPQKRPLVIHLLPElgVRLFPVGRLDYDSEGLLLLTNDGGFAQRVQHPRYRISKTYRVKISGRLNAAEFNRLQKGLELEDGKFAPDEVAL---------------EEINPKSSWLTMKISEGRNRVIRRAFEQLGHEVLRLIRTAVADLHLGNLREGDYR----
>UniRef50_D1PIW4(24-227:237) Pseudouridine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIW4_9FIRM  E=2e-35 s/c=0.74 id=37% cov=73%
----------------------------------------YIMLNKPEGVVSASRDKRD-TTVVDLVaadfPRRALFPAGRLDKTSTGFVLLTDDGALAHDLLSPAHHVDKQYLVTLDTPLTDAMRAGFAAGVTLADGETmAPAEAEP-----------------AGEDPCVVKVTLHQGVYHQIKRMFGVYGAGVNALHRYAIGGVALDaALAPGQWRELT-
>UniRef50_C0QWY7(20-218:229) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QWY7_BRAHW   E=3e-35 s/c=0.75 id=32% cov=73%
----------------------------------------YIKLNKPRGYVVSSNKNEGKP-IYNLIKKdfDNIYPVGRLDKDSSGLILFTNDGVFAKQIIGENTNCEKEYYVRVDDNIPDGALQKLEYGISLDGQKLKPAKVKRVNKNS-------------------FHIILTEGKNRQIRRMCQKVGFEVIILKRLRISGILLEDLKEGTFKSLTK
>UniRef50_A9KPL1(50-236:477) Pseudouridine synthase n=63 Tax=Bacteria RepID=A9KPL1_CLOPH   E=3e-35 s/c=0.80 id=34% cov=73%
----------------------------------------LIAFHKPKGIVCTTEKREPD-NIIDYIKySQRIYPIGRLDKDSEGLIFLTNNGDIVNKILRAGNHHEKEYIVTVNKPITAAFLKGMAGGVPILDTVTKPCTLEAIDKVT-------------------FRIILTQGLNRQIRRMCEHFDYKVTKLVRIRIMNVNLGRLKVGGYRNLTD
>UniRef50_A6GNL7(119-295:458) Pseudouridine synthase n=2 Tax=Betaproteobacteria RepID=A6GNL7_9BURK  E=4e-35 s/c=0.85 id=34% cov=73%
------------------------------QRKNKSKPPRVLIYHKPAGEIVSMDDPQGRTTVFQKLPKisnGKWIAVGRLDFNTEGLLLFTSSGELANRLMHPRYEVQREYAVRILGELSEEQRQQLLTGIQLEDGPAKFLYVDAAGGEGA---------------NRWYKVGLKEGRNREVRRMFEACNLTVSRLIRTRFGDI---------------
>UniRef50_C2KV26(29-229:239) Pseudouridylate synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2KV26_9FIRM  E=5e-35 s/c=0.74 id=32% cov=75%
----------------------------------------YYMMNKPVGVLSSTEDRKQ-KTVLDLFSDKHrkdLFPVGRLDKDSEGLLLIMNDGALAHKLLSPKMHIEKKYLVEIPGKISEEELDRLRQGIQYDtDLIAMPAKARCLSS---------------TEEGSRVEVIIMEGKFHQIKKMFLALstDYVVTKLQRLSMGPLHLDpALAPGEYRKLSE
>UniRef50_Q2NSN0(25-223:235) Pseudouridine synthase n=7 Tax=Gammaproteobacteria RepID=Q2NSN0_SODGM  E=6e-35 s/c=0.75 id=35% cov=73%
---------------------------------------RYFMLNKPQGYVCSTDDP-DHPTILYFIDEPvpdKLHAAGRLDIDTTGLVLLTDDGQWSYRLTSPRHHCEKDYLVTLEQPLAAEITAQFAAGILLRGEklPTRPARLATLSPLK-------------------VRLTISEGRYHQVKRMFAAVGNRVVALHRERIGAIVLDAhLQPGEYRALT-
>UniRef50_C5CGJ5(1-196:205) Pseudouridine synthase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGJ5_KOSOT  E=7e-35 s/c=0.76 id=31% cov=89%
----------MTEPWFEIDPVKDSITLDGKKVRPRKQQRVVYALNKPRGYLSSMSDDRGRKTIADLIKgkiPEKVFHVGRLDMDTEGLIILTNDGELARKLSHPSSKIRKTYVARVTGKLSHHEIKRLENGVVLRDGF--------------KTSGASIRVIRASLRDTLVEIIIHEGHKREIREMFKVFDKHVLYLKRTAIGSLKVDIVPnPGDIKKLT-
>UniRef50_Q21MN5(46-228:324) Pseudouridine synthase n=6 Tax=Bacteria RepID=Q21MN5_SACD2   E=1e-34 s/c=0.81 id=26% cov=73%
----------------------------------------YIAYNKPFGITCTTDQTVKGNIVDAIDHDERIFPIGRLDKPSEGLILLTSDGDIVNKILRAENAHDKEYIVTVNKNLAPNFAEKMSRGLPILGTITKPCKVRVIGK-------------------TTFKIILTQGLNRQIRRMCDYLGYDVKQLVRTRIMNIELGKLKPGQWRRLTK
>UniRef50_A6WK95(44-248:256) Pseudouridine synthase n=12 Tax=Gammaproteobacteria RepID=A6WK95_SHEB8  E=1e-34 s/c=0.72 id=30% cov=82%
-------------------QVDEFSHIQLDEHILQANAPVYVMLHKPIGVVSATKDIQ-HKTVIDLLDCEArdeLHIAGRLDLNSSGLLLLTNDSRWSDALMSPTHKVDKVYRVTLANPITEEYIAAFAEGMYfgFEDITTQPAKLVILADNVA-------------------EVTLHEGKYHQIKRMFGRFRNPVVGLHRLSIGDIVLDeKLAPGESRALT-
>UniRef50_C6BUF1(24-237:251) RNA-binding S4 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BUF1_DESAD  E=1e-34 s/c=0.69 id=35% cov=76%
----------------------------------------YILLHKTIETVTTAKDPQGRKTVLDLLPPdvinRRVFPVGRLDFYSEGMLLLTTDGELCNRMTHPKWHLPKIYHVTIRGKLSEKELSVMQNGMYLEDKGELLAPVKI-------------KAISEVGETTKYEMELRQGINRQIRRMFGEFDKTILRLKRVRQGRIELGALKPGKWRELS-
>UniRef50_C8PSZ6(59-235:252) Ribosomal large subunit pseudouridine synthase B n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSZ6_9SPIO  E=1e-34 s/c=0.84 id=29% cov=73%
----------------------------------------YVLLNKPAGFVCTLSDEKGRPTAADLLKEaysERLYNIGRLDMFSSGAILFTNDGDFAAKIEHPSAQIEKEYVIETTQDFPPELLTRFERGIRVDGIFYKCRSAAAVNRRK-------------------LRIVLVEGKNREIRRVLDSFNCTIKRLVRVRIGNLELGTLKAGEFRDLT-
>UniRef50_A0CY18(62-262:337) Chromosome undetermined scaffold_30, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0CY18_PARTE  E=2e-34 s/c=0.73 id=32% cov=80%
---------------------------KNGEKMPTKQSTKVWIFYKPVGMICSHNDPFKRPSFYDFAKlrlktDQHIISVGRLDFNSEGLIVVTNDGELARCMELPETKLQRIYRVRVYGTFTEEKLKKIRNGITIAGVNYGP---------------YWVNVENRQSRNTWLIMRLEQGKNREIRKVMQKFDLRVNRLIRQSYGPYKLMGLKPGDFYE---
>UniRef50_A8U4V7(46-226:239) Pseudouridine synthase n=10 Tax=Lactobacillales RepID=A8U4V7_9LACT   E=4e-34 s/c=0.81 id=34% cov=76%
------------------------------------QPHVYYMLHKPAGVVSAVSDAVN-QTVIDLIEPsqrvPGLFPVGRLDKDTEGLLLLTNNGQLGYQLLIPKKEVTKCYEVVVNERVTDDDQLAFTAGIVFDGGvICKPAQLTILS---------------QSDTESRVLLEISEGKFHQVKKMFLSVGKKVIYLKRLSMGPLQLDKtLSLGSYRPL--
>UniRef50_C0EB54(48-223:248) Pseudouridine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB54_9CLOT  E=9e-34 s/c=0.82 id=32% cov=73%
------------------------------------QEHLYLMLNKPQGVVSATDD-KVHRTVLDLVPPElrrrGLFPAGRLDRDTVGFVLITDDGEFAHNILSPRHHVPKTYEAGLDGPIGENELSVLAQGVVLGDGtKCRPAELTVL----------------QSGERPLIQIVIVEGRYHQIKRMFAAVGRRVLTLKRTKIGGLALDpSLKEGD------
>UniRef50_O32068(37-224:239) Uncharacterized RNA pseudouridine synthase ytzG n=68 Tax=Bacteria RepID=YTZG_BACSU  E=2e-33 s/c=0.77 id=36% cov=73%
----------------------------------------YLMMNKPQGVLSATEDSRQ-QTVVDLLTPEEMrfepFPAGRLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVHLKSQISREDISDLETGVYIEGGyKTKPAKAEIKTNDSG---------------NTVIYLTITEGKYHQVKQMAKAVGNEVVYLKRLSMGRVSLDpALAPGEYR----
>UniRef50_B1KQS3(26-229:239) Pseudouridine synthase n=20 Tax=Gammaproteobacteria RepID=B1KQS3_SHEWM  E=4e-33 s/c=0.70 id=32% cov=80%
-----------------NNHIRLEGGQRLTARA-----SRYIMLHKPADTLSSNVDG-DHPSVFNFINLEHtseLHIAGRLDADTTGLLLITDDGRWSFNVFNPKYHCEKVYRVylrdsiegEIAGEIDAELKARFKQGLDLQGEQalTLPAKLEFVSPKE-------------------VLLTITEGRYHQMKRMFARVGNRVNALHREQVGKIKL-DMPVGQWRYLT-
>UniRef50_Q21JF0(18-234:242) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q21JF0_SACD2  E=4e-32 s/c=0.65 id=38% cov=72%
----------------------------------------YIMLNKPTGYVCANKDNIHSP-VVDLITEQHarqsdqtppkyraqsLQIAGRLDVDTTGLVLLTDNGEWNHRVTSPNKACFKRYRVKLEKPLDDAAIKLLSEGVMLHGEKaaTLPATVELIS-------------------NTEVLLSIQEGRFHQVKRMFVKVGTCVVKLHREAIGAIELDtNLKPGQWRHLT-
>UniRef50_A1S9T3(29-236:254) Pseudouridine synthase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9T3_SHEAM  E=3e-30 s/c=0.64 id=30% cov=88%
-----------------SHSDRVFDSNRVTVDGAPLCPAQakaYFLYHKPVGIDCRLRAEDPHSLIHCLPGDLRLFPAGRLDKDSRGLLLLTNDGELTQRLMHPDFHHQKGYLITLNKAPQPDDIAAIAAGFDYGEGPTRPCVVEAAIDCGYATEDGNPRK---------LRMRLTEGKKRQIRRLWRARGYRVLDLLRESIQQLNIGKLEQGEIRSLT-
>UniRef50_A6ES27(97-279:289) Pseudouridylate synthase (Ribosomal large subunit pseudouridine synthase B) n=3 Tax=Bacteroidetes RepID=A6ES27_9BACT  E=3e-28 s/c=0.69 id=22% cov=83%
------------------YKVKLEDDVRFDGRRINPEPMTYVLLNKPKGFATTTSESKG-NTVMDLVANAsnsRITPIGRLGRNATGLLLFTNDDKLKEKLS--KKGMSRLFHVELDKNLKAADIQKIREGFTIAGKKIEIEEINYVEGKTKKE----------------IGLKIKNLGNSVIRDIFAHFEYDIVRLDCVALAHLTKKDLPRGKWKILT-
>UniRef50_B7G1P9(106-287:331) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G1P9_PHATR  E=7e-28 s/c=0.69 id=34% cov=58%
-------------------------------------------------------------------------SVGRLDMNTEGLILVTNDGKYAREMELPSNKLHRTYRVRVHGLLTDHKLARIRKGVTVEGIRYPPMRI--IPESTRQSQST----------NKWLKVTCTEGKNRQIRNVFKYLGLTVTRLIRISYGDYRLQTIPPG-------
>UniRef50_C4V3I7(79-242:294) Pseudouridine synthase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3I7_9FIRM  E=3e-27 s/c=0.75 id=22% cov=54%
----------------------------------------------------------------------DFHPCHRLDRNTSGLLLIAKHPEVQYQIAQQ-NTLRREYLALIAGSLTPPEG-----CIDVPIARALPSIILRCVSTEGKSACTHYVTVQTDGRYSLLRLQLDTGRTHQIRVHLAHLGHPLL-------------------------
>UniRef50_C0EHV8(82-243:299) Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHV8_9CLOT  E=3e-27 s/c=0.76 id=32% cov=53%
------------------------------------------------------------------------RPVNRLDRGTSGLLCVAKNAHAQARLSQQLHTgaFERIYYAVVCGAPSPAAGT-----IDLPIGRTPGSVLKRRVDPQGARAVTHYETVRVNGAYTLLKIRLETGRTHQIRVHFAHLGCP---------------------------
>UniRef50_Q54RS0(50-236:571) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54RS0_DICDI  E=5e-27 s/c=0.66 id=32% cov=77%
----------------------------------ENGETLHIAVHKPSGYICSTVNDHDHKIIYDILPkeffkrKPTLSIAGRLDKWVTGLVVLSQDGKLVDRIISPKdDGCGKDYEVVLKDKLVGDEAEVFESGkIMLRGEstPCKPAKLQVLDKEKNK-----------------VKVTLYEGRYHQIRRMFASTENKAVEIHRTRIGPVELGDLGLGKWRHLTE
>UniRef50_C0QV86(79-283:329) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QV86_BRAHW   E=1e-26 s/c=0.59 id=20% cov=67%
----------------------------------------LLVINKPAGMSVHCSPSEMSGTLVNALlykikdfdfvgNKERAGIIHRLDKDTSGLMIIGKNANIVSSIqeQFKNRTIKKIYHAIVVGVLKDNYIE-----INLPIGRHHVYRKKMTVREDGKEALTHIKVLKRFNSHTLIEINLKTGRTHQIRVHSSYKGFP---------------------------
>UniRef50_C8QZ10(95-279:324) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZ10_9DELT  E=6e-25 s/c=0.63 id=26% cov=51%
----------------------------------------------------------------------------RLDKDTSGCLVVAKNDLAHHNLvqQFKGREVEKTYQALLRGILAEDTGQ-----VVLPIGRHPVHRKKMaVRREGGREAVTHWRVrQRFSAGYTLVELLLETGRTHQIRVHMAALGHP---------------------------
>UniRef50_B9XBT8(31-222:260) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XBT8_9BACT  E=2e-24 s/c=0.60 id=18% cov=68%
----------------------------------------LLVINKPAGLVCHPTKGDEYSSLISRVrlhlgPESHPHLVNRLDRETSGIVIVAKDDTTARGLrrIWEGREVQKEYLAIVHGHVREEQGTIQAA---LGKDTSSIIAIKDTVVEGGAASQTDFTVkkrfSREEGDFTLLRVLPHTGRKHQIRIHLAHIDHP---------------------------
>UniRef50_B8CWB7(79-261:310) Pseudouridine synthase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWB7_HALOH  E=2e-24 s/c=0.63 id=22% cov=68%
----------------------------------------LLVINKPANMLVHPTPVEKSNTIVNGVlyhmrnqgNYNLVRPIHRLDRNTTGLLLIAKNQYAHNYITHqfQNNNIHREYLAFVHGNVEFKK-----ESINAPIGKTRDSLIKRkVDHTLGKRAVTHIKVVKPGGLISLIRVKLETGRTHQIRVHLSHLGHPLL-------------------------
>UniRef50_A6TSZ4(90-258:308) Pseudouridine synthase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSZ4_ALKMQ  E=2e-24 s/c=0.67 id=22% cov=53%
--------------------------------------------------------------------------VNRLDMDTSGLLVIAKNPYTHHIMSQQmkANEITKKYVAFVKGVVVANEGE-----IDGAIYRSSDETIKRVVDDRGQQSLTKFTVLERYADATMLEVSLLTGRTHQIRVHMESIGHPML-------------------------
>UniRef50_O67638(45-259:316) Uncharacterized RNA pseudouridine synthase aq_1758 n=3 Tax=Aquificaceae RepID=Y1758_AQUAE  E=5e-24 s/c=0.53 id=21% cov=53%
-------------------------------------------------------------------------IVHRLDKETAGVMVIAKNNTAHRNLvrQFQERKTEKFYKVLVKGLVKKDYGA-----IDTPIARHPVDRKRFWVRKEGKEALTEYWVLKRYEKYeiTLLKVKIHTGRTHQIRVHFASIGHPVL-------------------------
>UniRef50_D1BPK7(82-244:288) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BPK7_VEIPT   E=6e-24 s/c=0.69 id=25% cov=53%
-----------------------------------------------------------------------VRPVHRLDRDTSGCILFGKTKEAQQYYTDelQAGRIDRIYTGLVEGRIDANGM------VDAPIGVDPVFDNRRVIDELGQPAQTEYIVLDHEGDNTLLRFKLLTGRTHQIRVHMEHIGHP---------------------------
>UniRef50_A3DDK9(81-246:318) Pseudouridine synthase, RluA family n=3 Tax=Clostridium thermocellum RepID=A3DDK9_CLOTH  E=3e-23 s/c=0.66 id=22% cov=55%
--------------------------------------------------------------------VKKIRPVIRLDRDTSGIIIFAKNPYCQEFLIRQmnDKTFIKEYIGIVHKVLENDNGT-----IDLPIARKPGSIMLRHISPDGDPAVTHYTVLERLNGATLVKFRLETGRTHQIRVHCQAIGHPLL-------------------------
>UniRef50_C6CW89(58-278:322) Pseudouridine synthase n=2 Tax=Bacteria RepID=C6CW89_PAESJ   E=4e-23 s/c=0.50 id=22% cov=53%
-----------------------------------------------------------------------IFIVHRLDRDTSGVLMFAKSEAVQQKLQEEWQTIVKErsYVALVEGEVKRQEGTISS---WLKETKTLRMYSSPH-PNDGQHAVTHYKLLQAGKVFSLVEVHLETGRKNQIRVHMQDIGHP---------------------------
>UniRef50_Q3A3D8(55-238:301) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=Q3A3D8_PELCD  E=6e-23 s/c=0.59 id=23% cov=54%
----------------------------------------------------------------------------RLDRDTSGVMIFSIHARAHKSLSdiFAARRVQKHYLALVAGCMQAPQGEF--RSLLARQHRTNLMKS---VARGGKEAVTRYRVIEKFGDAELLEVEIPTGRSHQIRVHFAEAGHPLLGDIRY--------------------
>UniRef50_C0ZCK6(87-253:302) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK6_BREBN  E=7e-23 s/c=0.65 id=20% cov=54%
-----------------------------------------------------------------------VRHVHRLDQDTSGVVLYAKHPWASALLdeMLRERTIKRTYVAYVSGQMPKERGK-----INEPIGKDRNHGTRRRVTPNGDPAITHYQVKERFQTATKVECQLETGRTHQIRVHFSHIGHPLL-------------------------
>UniRef50_B7HGW1(84-249:297) Pseudouridine synthase n=52 Tax=Bacillales RepID=B7HGW1_BACC4   E=9e-23 s/c=0.65 id=23% cov=54%
-----------------------------------------------------------------------VHIVTRLDRDTSGLMLIAKNRFVHHLLskQHQQKAVKRTYEAIVHGKIVEREGM-----IDAPIGRKSDSIIERTVCEDGQRAVTHFKVIDSTYHKTHVALELETGRTHQIRVHMAHVGHPLL-------------------------
>UniRef50_C0F0M1(85-266:306) Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0M1_9FIRM  E=1e-22 s/c=0.59 id=20% cov=56%
-----------------------------------------------------------------------IHLIGRLDKETSGILGIAKNSVTAERMIKQRQRgiLIKEYYALVKGNPPEEGILEIPMEEMRDARDGDKLKMKVGKSENAKTAKTFFQVVKRFEKFSLVSLVIETGRTHQIRFHMASIGCPLL-------------------------
>UniRef50_A9HEJ0(6-176:227) Pseudouridine synthase n=10 Tax=Acetobacteraceae RepID=A9HEJ0_GLUDA   E=2e-22 s/c=0.63 id=29% cov=53%
--------------------------------------------------------------------------AHRLDRDTSGCLLIAlrKQALLAAQAAFAAGQVRKTYWAVVQGRPAADSGTVAMTMARHSDR----QGWRMVAAPDGQASRTDWRVLASDGRESWLELHLLTGRTHQARLHCASLGCPIL-------------------------
>UniRef50_B2A2J2(93-268:328) Pseudouridine synthase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2J2_NATTJ  E=5e-22 s/c=0.60 id=25% cov=52%
----------------------------------------------------------------------------RLDKDTSGLLVVAKQNETHDILSEeiKNRRVARTYLALVIGDFSKKK-----ATIDLPIGRDPRNRKKMAVVHGGKRAITKVEMLRSFQNpekISYLKCSLETGRTHQIRVHLSHLGYPLL-------------------------
>UniRef50_B9JWI8(72-270:330) Pseudouridine synthase n=1 Tax=Agrobacterium vitis S4 RepID=B9JWI8_AGRVS  E=1e-21 s/c=0.53 id=25% cov=69%
---------------------------------------KVFVLNKPAGLAVQGGSGLNRHIdqmLEAWTskKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTaaFRERDTKKTYWALVKGVPRkhDDKISTWVVKEQTEDG--DRMRIARHGEDGADHAVSYYRVLEtAAQSLAWLEMEPYTGRTHQLRLHALHIGHP---------------------------
>UniRef50_A1TKA2(56-261:267) RNA-binding S4 domain protein n=8 Tax=cellular organisms RepID=A1TKA2_ACIAC  E=1e-21 s/c=0.51 id=28% cov=53%
-----------------------------------------------------------------------------------GLVVYTQDRRMARRLAEDIELLEQECIATVDGRIAEGGLERLCRGLEFNGRPLPPAKVSWQSE-------------------TRLRFALKGIRPGQIPAMCEAVGLQVTALKRLRIGRVSLARVPEGQWRYL--
>UniRef50_C6J8T7(91-289:349) Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T7_9FIRM  E=1e-21 s/c=0.53 id=24% cov=25%
--------------------------------------TDILAVDKPAGMVTHPTGMHYTDSLSNLVagyfreknEQVCVRPVGRLDQETSGIVVFAKN------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C0X7U3(79-248:297) Pseudouridine synthase n=21 Tax=Enterococcus faecalis RepID=C0X7U3_ENTFA  E=1e-21 s/c=0.62 id=37% cov=23%
-----------------------------------------------------------------------IHVVTRLDRDTSGLMLFAKHGFAHALIDQelREKKVTKIYYALVGGAIEQ--------------------------------------------------------------------------------------------------
>UniRef50_B7G1Y5(28-244:286) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G1Y5_PHATR  E=1e-21 s/c=0.48 id=32% cov=63%
-----------------------------------------------------------------------LHAIGRLDAETTGLLLLTNDGGLVHHVTnkdsvshqHHGNPVFKTYEALVMGFYDNhsPLLEKMRtQGVNIGDKY----------GGTTRPVDELIVKTNPTLKSTLVSLTICEGKNRQIRRMFHALGSGVIRLCRTQIGRsLTLSSVPmAGQWRILTE
>UniRef50_Q6MEZ4(12-199:243) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEZ4_PARUW  E=3e-21 s/c=0.55 id=25% cov=22%
----------------------------------------LAIIYKPSGLLSVATAFEKGETTHALLkahyKPRKVFVVHRLDQDTSGVMV----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q39Z12(2-185:270) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=Q39Z12_GEOMG   E=4e-21 s/c=0.56 id=22% cov=55%
-----------------------------------------------------------------------VYPVHRLDKPTSGVLLFALDPAFARGLvgAFASGSVTKTYLAVVRGTMPEEGVIDhplAEEPDRFEQGRGNageRAPQSAVTGYRRLADVELPVAVGRypTSRYSLVSLSPRTGRRHQLRRHLKHLFHP---------------------------
>UniRef50_A8F4Z7(57-247:294) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A8F4Z7_THELT   E=5e-21 s/c=0.54 id=26% cov=46%
------------------------------------------------------------------------HLVHRLDRDTSGVLVIAKNVKTARTLshMFRNRLVKKEYITLVSGK------------IFGDGFIDKPL--------DGSEALTEYKVLENFRDTSLLRVILHTGRTHQIRKHFALIGNP---------------------------
>UniRef50_A5WCP4(126-321:364) Pseudouridine synthase n=15 Tax=Moraxellaceae RepID=A5WCP4_PSYWF   E=6e-21 s/c=0.53 id=25% cov=53%
----------------------------------------------------------------------------RIDKDTSGLLMIAKKRSTLKVLQEylREKTIQKHYLCLVKGQPALNEFEIdapLLRYTVANGE--RRVKVDKANPEAKLSQTTCKVLARFkmnGEPVSLIEAMPHTGRTHQIRVHLAYLGHPIL-------------------------
>UniRef50_Q5LC96(49-276:305) Pseudouridine synthase n=29 Tax=Bacteroides RepID=Q5LC96_BACFN   E=6e-21 s/c=0.45 id=23% cov=61%
-----------------------------------------------------------------------IYVVHRLDRDTSGLMMFAKDEKTQYTLRDHWHDIvtDRRYVAVVTGEMEKDSDTVVS---WLTDRTLYVSSSSYDDGGSK--SITHYRTIKRANGYSLVELRLETGRKNQIRVHMQDLGHPLIGDGRYGIdgGPNPLGRLA---------
>UniRef50_A9IIW7(104-271:324) Pseudouridine synthase n=5 Tax=Bordetella RepID=A9IIW7_BORPD   E=6e-21 s/c=0.61 id=24% cov=52%
----------------------------------------------------------------------------RLDKDTSGLMVVARNELAQTHLvrQLQARSMGREYIALAHGWLPVAGKVDRPIGRDAR----VPVRMSVERPIAPKPAITHYAPLRRGrapdGPVTEVACRLETGRTHQIRVHLASLGHPLL-------------------------
>UniRef50_C8NZX3(59-242:298) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZX3_ERYRH  E=7e-21 s/c=0.55 id=23% cov=53%
---------------------------------------------------------------------PGL--VHRIDRNTSGLLVIAKDDKTHQFLAEQllDKTMNRTYYALVHGVLPQAHV-LIDAPIGPDKSNT---KIMTVNQARSKPARTHFEKIETYINSSLICCKLETGRTHQIRVHALHANIP---------------------------
>UniRef50_D0XS67(105-283:350) Pseudouridine synthase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XS67_9CAUL  E=7e-21 s/c=0.57 id=21% cov=54%
----------------------------------------------------------------------------RLDRDTSGVLLLGKGPEAAKRLagAFARRQAKKTYWAIVMGLPKPADGQISVHLKKSGINDYEIMRPADPKDPGAEPAETAYAVIsHAAQRASWMALRPFTGRTHQLRAHMKAIGHPIL-------------------------
>UniRef50_A6NVX8(72-266:299) Pseudouridine synthase n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVX8_9BACE  E=8e-21 s/c=0.52 id=24% cov=23%
-----------------------------------------------------------------------LFVVHRLDRDTSGAVLFARNEEMKRALQEDWDSLVKEriYLAVTVGAPERE-------------------------------------------------------------------------------------------------
>UniRef50_Q47417(117-299:376) tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC  E=8e-21 s/c=0.56 id=25% cov=53%
----------------------------------------------------------------------HVYTVHRLDRPTSGVLLLALSSEVARALSQQfeSHQMQKTYHAVVRGYVLDDGVIDYALTEELDkiaDKFTNPDKA-------PQPAVTHYRSLAQAEmpvaigryptaRYSLMELKPQTGRKHQLRRHMSHIHHP---------------------------
>UniRef50_C9LLD9(60-267:313) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLD9_9FIRM  E=1e-20 s/c=0.49 id=20% cov=69%
----------------------------------------ILIVDKPAGILTQ-SDNSNELSLNDALldychynnhSTAKPSVCNRLDRNTSGIVLCGKTVKGLQMLNEiiKNRTLHKYYRCIVLGETKEQD---TLKGFLIKNESANQVTIITEQKDNAVPIETRYKRistmERAGNICSLLEVRLITGRPHQIRAHLTSIGHPIL-------------------------
>UniRef50_A7H6D3(90-261:339) Pseudouridine synthase n=6 Tax=Cystobacterineae RepID=A7H6D3_ANADF   E=1e-20 s/c=0.59 id=27% cov=53%
-------------------------------------------------------------------------PAHRLDRDTSGVVLVAKNRKTMVRLTElftDGADVKKTYLALVKGKMPREAGTI--DLPLAEHEQTARSKAARGV--NLQEALTRWKVVSAMKEASLLAVTIETGRTHQIRRHLEAVGHPVL-------------------------
>UniRef50_C6XFC8(77-272:346) Ribosomal large subunit pseudouridine synthase C n=5 Tax=Rhizobiaceae RepID=C6XFC8_LIBAP  E=2e-20 s/c=0.52 id=32% cov=36%
---------------------------------------KIYVFNKPAGISVQGGSGIAYHIdgfLKSWVDSKGQKPrlTHRLDQETSGILVVARTRAAAQHLTesFRMRRIQKIYWSLVWGIP----------------------------------------------------------------------------------------------------
>UniRef50_Q1WSL9(79-248:295) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=Q1WSL9_LACS1   E=3e-20 s/c=0.59 id=20% cov=53%
------------------------------------------------------------------------HIVTRLDRDTSGIVIFAKHRYAHALLDSQlkEHKISKTYTAILSGILHNNHYII---DLPIGRDSTSLIKRKVLFSEKAKRSKTEIFVEERIRDNTLCKIKLHTGRTHQIRVHCSYLGYP---------------------------
>UniRef50_A5INM9(75-262:304) Pseudouridine synthase n=7 Tax=Thermotogaceae RepID=A5INM9_THEP1   E=3e-20 s/c=0.53 id=26% cov=44%
----------------------------------------------------------------------------RLDKDTSGLLVVAKDREAARILTelFKDRNIEKEYVTLVRGTPENN--------------------MKITIPLDGQEAISEIVSVKSLRDVSLLRVKIHTGRKHQIRRHLSQIGFP---------------------------
>UniRef50_Q03E91(80-245:294) Pseudouridylate synthase, 23S RNA-specific n=2 Tax=Pediococcus RepID=Q03E91_PEDPA  E=3e-20 s/c=0.60 id=22% cov=23%
------------------------------------------------------------------------HLVTRLDRFTSGITLVARHQVSNSLLSEQvaHHKIKKIYLAMVDGVVQAE-------------------------------------------------------------------------------------------------
>UniRef50_C6XLD8(18-233:272) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLD8_HIRBI  E=1e-19 s/c=0.46 id=21% cov=71%
----------------------------------------ILAFNKPSGLACQTRSPADRTfdaLLQVYVKRNGKRPrmLHRLDMLTSGVIIAARTKPATSFFqqTFERREAYKSYLAIVRGPAFEKSEGVIDAHLQRYQKEPNLALMRpcDVDGEGAQDARTRYLVLSSQNDYHFLLLTPETGRTHQLRVHLEHFGRPIL-------------------------
>UniRef50_B2UKZ0(17-217:258) Pseudouridine synthase n=2 Tax=Verrucomicrobiaceae RepID=B2UKZ0_AKKM8  E=1e-19 s/c=0.49 id=21% cov=54%
--------------------------------------------------------------------------VNRLDRETSGLTLVAKHKRAARELgrAMQRRLIHKEYLAIVQ-EWPEWTETACTAPILRQGEVAeSRIWVKQAVHPAGKACTTVFRKERtwntRRGPLALVRCIPETGRMHQIRVHLAHLGHPIL-------------------------
>UniRef50_Q31EX3(109-265:300) Pseudouridine synthase Rlu family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EX3_THICR  E=1e-19 s/c=0.63 id=25% cov=60%
--------------------------------------------YKPKGVLSQGSKWGDHTTLNRWIETHYLFkeppekrpcwIVHRLDKATDGLILIAHNKKSAQMLArrFEAHQIGKSYQAWVKGKFGETE-RVFDQDV---NGKTALSKA-------------HQLVYNSDNDCSLVQVTIATGRKHQIRIHLSKAGFP---------------------------
>UniRef50_Q1IZY6(13-184:251) Pseudouridine synthase n=3 Tax=Deinococcus RepID=Q1IZY6_DEIGD   E=3e-19 s/c=0.57 id=26% cov=23%
---------------------------------------------------------------------PDLAPPHRLDRETSGTQLLSRDPDAARRFftLFKTHLVGKTYLAVVHGSPD---------------------------------------------------------------------------------------------------
>UniRef50_Q2LVB7(112-275:324) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVB7_SYNAS  E=3e-18 s/c=0.57 id=30% cov=22%
------------------------------------------------------------------------FAVHRLDKEVSGVLLFAKSKMAMDHIKEKWKEAEKRYYALVEGKPE---------------------------------------------------------------------------------------------------
>UniRef50_Q30SZ1(3-184:241) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q30SZ1_SULDN   E=5e-18 s/c=0.51 id=20% cov=54%
-----------------------------------------------------------------------VYPIHRLDKPTSGVLLFALDKESAKIMgeKFMAHEAKKSYIAVVRG----YTLQSGEIDYALSIKFDKIADKDSSSDKEPQEALTHYKRLatveldfevgkYDKTRYSLVKLNPLTGRKHQLRRHMKHISHHIL-------------------------
>UniRef50_A5WHV7(3-202:237) Pseudouridine synthase n=3 Tax=Psychrobacter RepID=A5WHV7_PSYWF   E=1e-17 s/c=0.46 id=20% cov=68%
----------------------------------------LLLVDKPAGLLSIDGKDLKVSLLSRLeRANPEVKLIHRLDMDTSGLMIFAKNKQAQTHISKQfiERIPQKEYQAIVQGTLAIPGKKgEINIPVRYEPSIKPK---HVADPEWKKHALTHYEVlhheLRKGRPVTRVALHPVTGRSHQLRVHMVHLGH----------------------------
>UniRef50_A6LT86(64-267:324) Pseudouridine synthase, RluA family n=35 Tax=Clostridium RepID=A6LT86_CLOB8  E=5e-17 s/c=0.44 id=24% cov=68%
----------------------------------------VVVIEKWPDVLVHSdSNNSEEPTLTdyvlsylndkgDYIPENEItftpAACNRLDRNTSGMVMFGKTfeGLKAINEAIREDEIRKYYYALAKGKIRAG----LYEAYILKNPETNTSKIYDTEVKNSKKISMEISIVESNGAYSLLEIHLITGRSHQIRAHLAHLGNP---------------------------
>UniRef50_A6GAA8(94-261:311) Pseudouridine synthase, RluA family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAA8_9DELT  E=7e-17 s/c=0.53 id=23% cov=54%
---------------------------------------------------------------------PYVGVVHRLDQGASGLVLFTIRDVANKSLhkQFRDHEIRRGYRVRVTGEPPA-QLRCDAPLIKLRSG---GVKVGSPGDGRSKPATTHFrhvaRVDGEAGPEHLLDVEIETGRTHQIRAHAAHLGFP---------------------------
>UniRef50_B6HIT3(124-325:526) Pc21g01540 protein n=3 Tax=Trichocomaceae RepID=B6HIT3_PENCW   E=2e-16 s/c=0.44 id=23% cov=26%
------------------------------------------------------------------------RPCNRLDRLTSGIMFIGKHAKGADKMaaALKARSVQKEYVARVKGKFPD--------GVVVCDQP----------------------------------------------------------------------------------
>UniRef50_C7H3R7(89-306:365) Pseudouridine synthase, RluA family n=3 Tax=Ruminococcaceae RepID=C7H3R7_9FIRM  E=4e-16 s/c=0.40 id=27% cov=69%
----------------------------------------IAVLYKPTHLLCH-SDRTGDANLVDaftqYLAQKGEYDAGgenrfkpgicnRLDRGTEGLVIAAKSYAALRDMNEIIRTdlLKKEYYTITVGIPQSGRFTAWWEHDEKNNKVSIHAHQSQ--DERRKQIITDVDVLRTAGPFALCKIGLVTGRTHQIRAHLAYLGKPVL-------------------------
>UniRef50_A8Q8B1(72-257:937) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q8B1_MALGO  E=2e-14 s/c=0.44 id=34% cov=30%
-----------------------FLVNRVHRHEPAvtNAPVRIlhrddsqgrIVVVKPGSIPVHATGRYHHHTLVEMVKEqaklQNLYTSNRLDRLTSGIMV----------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B2RHT4(75-261:324) Probable RNA pseudouridylate synthase n=1 Tax=Porphyromonas gingivalis ATCC 33277 RepID=B2RHT4_PORG3  E=4e-14 s/c=0.43 id=20% cov=59%
--------------------------------------------------------------LKQYDPEVKIFMLNRLDKDSAGMVLFAKNKEVQGFVVDKWSKVvlEQRFVMAIEGEMPDAEG-TLDPPRYQTSIKGKQSRIVAETPSVHSVGTARYKVIRRGAVCSLVEVTLLSGRNNQLRRQMGQLGIP---------------------------
>UniRef50_C1ZMD6(198-359:400) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMD6_PLALI  E=1e-13 s/c=0.48 id=27% cov=57%
-------------------------------------------------------------------PPCHVRAAHRLDRQTSGLVVLSRVPEAGAKLyaQFQAHDVLREYEALVWGWIEPQRLESELIRDRGDGRRGSRQPVTMLEAgaedspaanplPAGKMAATNLVASRQGhfksgtgelAPVSWIRCQLETGRTHQVRIHLSEKGNP---------------------------
>UniRef50_B4SRI5(32-226:232) RNA-binding S4 domain protein n=3 Tax=Stenotrophomonas RepID=B4SRI5_STRM5  E=2e-12 s/c=0.38 id=22% cov=56%
----------------------------------------------------------------------GLQLAAALPASDSGLVVVSQDPATLAHLQRNLGRTEQEYLIEVA-----------------EGGPERgPWLMARLQHESGGAKVSWQSEQR-------LRFAGKGLTAKGLRVAVGAAGLQVAAVRRLRIGRVALGPLPPGQWRYL--
>UniRef50_Q2I6L3(23-151:197) RNA pseudouridylate synthase n=1 Tax=uncultured delta proteobacterium DeepAnt-32C6 RepID=Q2I6L3_9DELT  E=1e-11 s/c=0.56 id=24% cov=50%
-------------------------------------------------------------------DAPGLAPAHRIDKATSGLLLCSPDPRVRARVGHwlAQGQVHKEYRALVFGH-THRSGRIDRPLMDRRRGRR-------------LDACTRFRRLATASQLSYLAVYPETGRKHQIRRHLRGLGH----------------------------
>UniRef50_Q602D5(66-242:281) Ribosomal large subunit pseudouridine synthase n=3 Tax=Mycoplasma hyopneumoniae RepID=Q602D5_MYCH2  E=3e-11 s/c=0.40 id=22% cov=49%
---------------------------------------------------------------------------GRLDKKTSGIILYGLNYQSVVELNQKQKFFEKIYTFKSDINLK----NTIKTDVFIRkNNFQQKMEVTLKSPNSFFASTTFYSKNQKKFA------ILHTGKKHQIRVSLSHLGFP---------------------------
>UniRef50_A9RVX3(70-234:361) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RVX3_PHYPA  E=1e-10 s/c=0.42 id=28% cov=48%
-----------------------------------------------------------------------VSPVHRLDRPASGAIIFSKsavaTRAAQASLSHPA--CIKEYVVLARGTTPD----FFICDEPVNDEKGAPKSAVSQCEK---------ILDLPESRCSLLKVVIKTGRWHQIRKHLNHRAH----------------------------
>UniRef50_B5YM19(46-287:344) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YM19_THAPS  E=2e-10 s/c=0.28 id=20% cov=61%
-----------------------------------------------------------------------LHGVHRLDRVTSGVLLLAKDSSVANELItkFRQGEVSKYYMAisgkkpkkkkqgWVKGqmvmgrrgsyKLVNENRDVLDEG-DGDDEVEDGGEVSQVKKKGGYAVTRFYTAglgdlqlaplpkcdgdesndDELLIPKTAILFQPHTGKTHQLRVAAKSAGIPILGDVRYGGGTVT--------------
>UniRef50_UPI0000E499FC(70-275:373) PREDICTED: similar to RNA pseudouridylate synthase domain containing 3 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E499FC  E=1e-08 s/c=0.30 id=23% cov=36%
----------------------------------------IVAINKPPGLGVSGKVNEDDESspltlssmmsqVADFTDCPSAEIAQGLEKEASGLLLLAENRMAAKKLQSKikearnRRQFIKTYRSIVCGIPE---------------------------------------------------------------------------------------------------
>UniRef50_C5L1A5(9-85:85) Ribosomal large subunit pseudouridine synthase E, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5L1A5_9ALVE  E=4e-08 s/c=0.79 id=26% cov=33%
-------------------------------------------------------------------------IAGRLDSDCSGLLVYTQDGRIAKAISDRYSSIPMEYEVALKAPCTDDQMSMLSQGMLIDGKQVEGCEAARI-------------------------------------------------------------------------
>UniRef50_C1N4S9(30-307:331) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N4S9_9CHLO  E=2e-06 s/c=0.20 id=26% cov=65%
-------------------------------------------------------------------------AIGRLDAETSGVLLFARGGELHRAV--RGQGVKKVYVATVAAPSQESALTRalssLTEPLSLRprddgdgggddgrggdddgggdgrivdddvrkkkrwsspatarvvrtwrlddddsdddddggggaadgaRYETRRARETWRARRREELDVTPEIERRRDGKDGFVdiEITVTDGAFHLVRRLVKRAGLKMRHLRRTAVGGVSTRGIdDPGDARALT-
