Phyre 2 alignment of P55914 with c3h4cA_

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Job Description | P55914
Confidence | 2.86% | Date | Thu Jan 5 12:06:16 GMT 2012
Rank | 92 | Aligned Residues | 17
% Identity | 65% | Template | c3h4cA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:transcription factor tfiib-like; | PDBTitle: structure of the c-terminal domain of transcription factor iib from2 trypanosoma brucei
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 52 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | 60 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | R | H | Y | I | L | L | . | . | . | . | . | . | . | . | . | P | S | C | L | A | L | I | A | G | I
Query Conservation |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | K | Y | I | L | K | L | G | L | Q | V | S | L | Y | L | P | H | C | K | R | L | L | T | A | L
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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