12 c1rktA_ Probab=99.85   E-value=1.2e-18  Score=151.43  Aligned_columns=199  Identities=14%

Q ss_pred             CCCCC-CCHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             89878-4339999999999999999828235-999999995899889852179989999999999999999999998502
Q batch____         3 NPAMT-IKGEQAKKQLIAAALAQFGEYGMNA-TTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEE   80 (223)
Q Consensus         3 ~p~~~-~r~~~tr~~Il~aA~~l~~e~G~~~-T~~~IA~~aGvs~~~iy~~F~sKe~L~~~~~~~~~~~~~~~~~~~~~~   80 (223)
                      +|..+ .++++||++|++||.++|.++||++ |+++||++||||+|+|||||+||++|+.+++++.++.+...+......
T Consensus         1 sPr~~~~~~~~~r~~Il~aA~~lf~~~G~~~~si~~Ia~~agvs~~tiY~~F~sKe~L~~a~~~~~~~~~~~~~~~~~~~   80 (204)
T c1rktA_           1 SPKVTKEHKDKRQAEILEAAKTVFKRKGFELTTXKDVVEESGFSRGGVYLYFSSTEEXFRRIIETGLDEGLRKLDKSAEH   80 (204)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             97779899999999999999999996192008899999995899999730079979999999999999999999973226


Q ss_pred             CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             55501111010001999999999999999838822699999999823696799999999999999999999997305889
Q batch____        81 AERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA  160 (223)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~  160 (223)
                      ...           ...........+......+................++................+..++..+...+.
T Consensus        81 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~  149 (204)
T c1rktA_          81 QSV-----------WASISSYLDELTEGLRDVADTLAPVQFEYLVTAWRNEERRQYLEKRYDLFVERFSRLLQKGIDQGE  149 (204)
T ss_dssp             SCH-----------HHHHHHHHHHHHHHTTTGGGSSHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCH-----------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             990-----------899999999999999826112589999999821354078999999999999999999999998499


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             854479999999999999999999999952965689421999999999999999997
Q batch____       161 NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQG  217 (223)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~ll~G  217 (223)
                      ...+......+.+.......+......     ....+...+.+.+.+..+++.+|.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~l~~  201 (204)
T c1rktA_         150 FQPVQPLATIAKFFLNXNDGIIQNALY-----FDEEKADVSGLAESAKLYLKTVLQA  201 (204)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHHHHH-----SCHHHHCHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHH-----CCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             999999899999999999999999995-----3988899899999999999999611