 |
| Job Description | P0ACU0 | | Confidence | 99.45% | Date | Thu Jan 5 11:19:02 GMT 2012 |
| Rank | 139 | Aligned Residues | 68 |
| % Identity | 25% | Template | d2gena1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
| Resolution | 1.70 |
|
 |
|   |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | K | K | Q | L | I | A | A | A | L | A | Q | F | G | E | Y | G | M | N | A | . |
T | T | R | E | I | A | A | Q | A | G | Q | N | I | A | A | I | T | Y | Y | F | G | S | K | E | D | L | Y | L | A | C | A | Q | W | I | A | D | F | I | G | E | Q | F | R | P | H | A | E | E |
| Query Conservation |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |
|   |
|   |   |   | . |
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
R | K | D | E | I | L | Q | A | A | L | A | C | F | S | E | H | G | V | D | A | T | T | I | E | X | I | R | D | R | S | G | A | S | I | G | S | L | Y | H | H | F | G | N | K | E | R | I | H | G | E | L | Y | L | A | G | I | G | Q | Y | A | A | L | L | E | A | G | F | A | R |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|