BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (134 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P45750 Uncharacterized protein yrfA n=89 Tax=Enterobact... 161 7e-39 UniRef50_A4WFI0 Putative uncharacterized protein n=1 Tax=Enterob... 158 6e-38 UniRef50_UPI000182682D hypothetical protein EcanA3_15607 n=1 Tax... 140 1e-32 UniRef50_C4X1Q3 Putative uncharacterized protein n=5 Tax=Klebsie... 129 3e-29 UniRef50_A7MKL5 Putative uncharacterized protein n=2 Tax=Cronoba... 123 2e-27 UniRef50_C8QE33 Putative uncharacterized protein n=1 Tax=Pantoea... 105 4e-22 UniRef50_D0KBC0 Putative uncharacterized protein n=1 Tax=Pectoba... 104 1e-21 UniRef50_C6DGD7 Putative uncharacterized protein n=4 Tax=Pectoba... 99 5e-20 UniRef50_A1JSD6 Putative exported protein n=5 Tax=Yersinia RepID... 94 1e-18 UniRef50_D0FX02 Conserved uncharacterized protein n=3 Tax=Erwini... 94 2e-18 UniRef50_C6CH38 Putative uncharacterized protein n=1 Tax=Dickeya... 91 1e-17 UniRef50_C4RXP3 Putative uncharacterized protein n=2 Tax=Yersini... 88 8e-17 UniRef50_A4TGT8 Membrane protein n=18 Tax=Yersinia RepID=A4TGT8_... 88 9e-17 UniRef50_D2BY41 Putative uncharacterized protein n=1 Tax=Dickeya... 88 1e-16 UniRef50_C4K8E8 Putative uncharacterized protein n=1 Tax=Candida... 85 8e-16 UniRef50_C6C806 Putative uncharacterized protein n=1 Tax=Dickeya... 84 2e-15 UniRef50_A8GKR0 Putative uncharacterized protein n=1 Tax=Serrati... 81 1e-14 UniRef50_C4U8S3 Putative uncharacterized protein n=1 Tax=Yersini... 80 2e-14 UniRef50_C4UH35 Putative uncharacterized protein n=1 Tax=Yersini... 55 9e-07 UniRef50_A2CCY9 Putative uncharacterized protein n=2 Tax=Prochlo... 41 0.013 UniRef50_Q48HA2 General secretion pathway protein GspN, putative... 39 0.033 UniRef50_Q7MH81 Type IV pilus (Tfp) assembly protein PilP n=3 Ta... 39 0.048 >UniRef50_P45750 Uncharacterized protein yrfA n=89 Tax=Enterobacteriaceae RepID=YRFA_ECOLI Length = 134 Score = 161 bits (406), Expect = 7e-39, Method: Composition-based stats. Identities = 134/134 (100%), Positives = 134/134 (100%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK Sbjct: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR Sbjct: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 Query: 121 RTGGKAAKSDADGG 134 RTGGKAAKSDADGG Sbjct: 121 RTGGKAAKSDADGG 134 >UniRef50_A4WFI0 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WFI0_ENT38 Length = 140 Score = 158 bits (399), Expect = 6e-38, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 MR + L +L LTGMRDPF PP D C I +L +W YQG++ ++G++KD Q + Sbjct: 8 MRTELRGLVLCSLVFLTGMRDPFHPPVDRCDIGKLDKWHYQGLISSAG-VVGIMKDEQDR 66 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 W R Q+D L +GW +L + + + G C+P +W W+R+G +E A Sbjct: 67 WHRAHQDDHLPSGWRVLAINEAEMVVEVGDGCDPKEWRWKREGTKDENNKDSQPASAVQH 126 Query: 121 RTGGKAAKSDADG 133 + +K+ G Sbjct: 127 VGLEQHSKTSDPG 139 >UniRef50_UPI000182682D hypothetical protein EcanA3_15607 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182682D Length = 121 Score = 140 bits (352), Expect = 1e-32, Method: Composition-based stats. Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 4/125 (3%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 M L+ +L LTGMRDPF+PP D C +L QWRYQG V +G ++DGQ++ Sbjct: 1 MGHSMRLMIVASLVCLTGMRDPFQPPADTCLTGQLPQWRYQGKVND----VGFMQDGQQR 56 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 W RV+Q+ L GW ++ + LT+ G C+P QW WQR+G V+ R Sbjct: 57 WHRVKQDQRLLPGWRVMAMDEQQLTVEVGETCDPRQWTWQREGTKKHEDKDSPAVNGPQR 116 Query: 121 RTGGK 125 G+ Sbjct: 117 VAVGR 121 >UniRef50_C4X1Q3 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=C4X1Q3_KLEPN Length = 127 Score = 129 bits (323), Expect = 3e-29, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 69/110 (62%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 M KRW+ + L LL RDPF+P ED CR ++LSQWRY G VG G ++DG K Sbjct: 1 MSGKRWIFLWLPLSLLAAERDPFQPVEDPCRTAQLSQWRYGGAVGDDAAWTGFLQDGNGK 60 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMD 110 WRRV+ ++ L GW + +LT L + T + CEPP W WQR+G ++AMD Sbjct: 61 WRRVRMDEQLLTGWRVSRLTAGELDIVTSSGCEPPAWRWQREGKQHDAMD 110 >UniRef50_A7MKL5 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MKL5_ENTS8 Length = 136 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 56/133 (42%) Query: 2 RVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKKW 61 W+L +A C RDPF PP+ C++ + WRY GMV +G+ + +++ +K W Sbjct: 3 SSALWILLMLASCPAWAARDPFAPPQARCQLHQADLWRYGGMVKKGDSVRVLLQTPEKTW 62 Query: 62 RRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTRR 121 RV L GW + + + + L +G C P +W + ++ + R Sbjct: 63 LRVSPGATLPTGWQLTGVEANKVMLKSGDGCRPSVLVWTLKDTHHDKEIPSFIITRGDNR 122 Query: 122 TGGKAAKSDADGG 134 GG Sbjct: 123 FRRAHEPGRLAGG 135 >UniRef50_C8QE33 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QE33_9ENTR Length = 129 Score = 105 bits (262), Expect = 4e-22, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 5/115 (4%) Query: 16 LTGMRDPFKPPE-DLCRISELSQ--WRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLEN 72 + RDPF+P LC+ + WR QG+VG + + ++ Q K R+ ++ L Sbjct: 15 MVLARDPFQPVAPALCQTAPAPPQGWRLQGIVGVPDHYVAWLRSPQGKNVRLMEHMQLPQ 74 Query: 73 -GWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDS-RTTVDADTRRTGGK 125 W + QLT L L C P Q ++ +G + + R T + Sbjct: 75 LPWRVQQLTARSLLLHVEQGCSPQQMQFRIKGGFYATDEGMAAAISGPERTTARQ 129 >UniRef50_D0KBC0 Putative uncharacterized protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KBC0_PECWW Length = 126 Score = 104 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 9/118 (7%) Query: 5 RWLLAGIALCLLTGMRDPFKPP-EDLC-RISELSQWRYQGMVGRGERIIGVIKDGQKKWR 62 ++L + DPF P C + L WR +G++G G+R IG + + W Sbjct: 13 LFVLHSVQAEKTVARIDPFHPLNAARCLPSATLPAWRLKGVIGSGDRWIGWLAQAEMGWV 72 Query: 63 RVQQNDVLENG-WTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADT 119 ++ + + G W + QL TL P G + + VD Sbjct: 73 KLTSGETIPPGNWVVSQLDKSGATL------VPTLREAGCDGLPDSLLLDSPFVDRPK 124 >UniRef50_C6DGD7 Putative uncharacterized protein n=4 Tax=Pectobacterium RepID=C6DGD7_PECCP Length = 125 Score = 98.7 bits (244), Expect = 5e-20, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%) Query: 7 LLAGIALCLLTGMRDPFKP-PEDLC-RISELSQWRYQGMVGRGERIIGVIKDGQKKWRRV 64 + + DPF+P C W+ +G++G GE +G + + W R+ Sbjct: 15 VAHSVQAENPAARIDPFQPLVTTRCLPSERQPPWQLKGVIGSGEHWVGWLAQPEVGWVRL 74 Query: 65 QQNDVLENG-WTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADT 119 + L G W + QL TL P G + + + ++ Sbjct: 75 VSGETLPPGNWVVSQLDKSGATL------VPTLREAACDGLPDSLLLASPFINKPE 124 >UniRef50_A1JSD6 Putative exported protein n=5 Tax=Yersinia RepID=A1JSD6_YERE8 Length = 125 Score = 93.7 bits (231), Expect = 1e-18, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPE-DLCRISE--LSQWRYQGMVGRGERIIGVIKDG 57 + V ++ AG L R+PF+ C L+ WR QG+V + IG ++ Sbjct: 16 VAVSQFPAAGAESLLAEVGRNPFERISTASCDDDRKTLAGWRLQGIVRGADYHIGWVQRS 75 Query: 58 QKKWRRVQQNDVLENGWTILQLTPDVLTLG 87 + +W++V L W + ++ ++L Sbjct: 76 EGQWQKVAIETRLLPYWQVTHISERQVSLQ 105 >UniRef50_D0FX02 Conserved uncharacterized protein n=3 Tax=Erwinia RepID=D0FX02_ERWPY Length = 120 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 19 MRDPFKPPED-LCR--ISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLE-NGW 74 RDPF PP+ LC+ S WR G++GR + + K R + D+L W Sbjct: 19 ARDPFFPPQSHLCQPLTPADSGWRLLGVIGRSDYYHAWLAASGGKTLRRKTGDLLPGTPW 78 Query: 75 TILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDA 117 + ++ TL +C+P Q +G + +VD Sbjct: 79 RVTRIDAHGTTLTPIQDCQPAQ-RLVLKG--RHNAQNSWSVDG 118 >UniRef50_C6CH38 Putative uncharacterized protein n=1 Tax=Dickeya zeae Ech1591 RepID=C6CH38_DICZE Length = 119 Score = 91.0 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Query: 7 LLAGIALCLLTGM---RDPFKPPE-DLCRISEL-SQWRYQGMVGRGERIIGVIKDGQKKW 61 L AG+ LC + RDPF+P C + + +W+ +GMVG + +G + Q W Sbjct: 9 LRAGLFLCCMGAEAVTRDPFQPLSTASCDDNPVKDKWQLKGMVGSSSQWVGWLFQPQSHW 68 Query: 62 RRVQQNDVLENG-WTILQLTPDVLTLGTGTN 91 RV+ DVL G W +++L + L T Sbjct: 69 LRVRDGDVLPLGDWQVMRLDRSGVVLRTTGG 99 >UniRef50_C4RXP3 Putative uncharacterized protein n=2 Tax=Yersinia RepID=C4RXP3_YERBE Length = 114 Score = 87.9 bits (216), Expect = 8e-17, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 3/90 (3%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPED-LC--RISELSQWRYQGMVGRGERIIGVIKDG 57 + V L T R+PF+ C L+ W++QGMV + + Sbjct: 5 ITVALAPAVYAEPLLTTATRNPFQKVSAESCGSDRERLASWQFQGMVSGADYHSAWGRWP 64 Query: 58 QKKWRRVQQNDVLENGWTILQLTPDVLTLG 87 +++ L W + ++ +TL Sbjct: 65 DASGQKLVVGQQLLPNWQVTDISAQQVTLQ 94 >UniRef50_A4TGT8 Membrane protein n=18 Tax=Yersinia RepID=A4TGT8_YERPP Length = 142 Score = 87.9 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 3/76 (3%) Query: 15 LLTGMRDPFKPPED-LCRISE--LSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLE 71 L RDPF+ C L+ W+ G+V G I+ W+R+ L Sbjct: 47 LANIERDPFQAVLATSCDSERERLTGWKLHGVVSGGGYQSAWIQRPDATWQRLTLGMRLV 106 Query: 72 NGWTILQLTPDVLTLG 87 + W + Q++ + Sbjct: 107 SEWQVTQISAQWVDFQ 122 >UniRef50_D2BY41 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech586 RepID=D2BY41_DICD5 Length = 138 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 12 ALCLLTGMRDPFKPPED-LCRISELSQ-WRYQGMVGRGERIIGVIKDGQKKWRRVQQNDV 69 + + MRDPF+P + C + Q W+ +GMVG R I + Q W RV+ DV Sbjct: 36 PIVRESVMRDPFQPLSEMACNSGQDQQKWQLKGMVGSSSRWIAWLVQPQIGWLRVRDGDV 95 Query: 70 LENG-WTILQLTPDVLTLGTGT 90 + G W I QL TL Sbjct: 96 IPPGDWQITQLDHGGATLRKTD 117 >UniRef50_C4K8E8 Putative uncharacterized protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K8E8_HAMD5 Length = 135 Score = 84.8 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 19 MRDPFKP-PEDLCRIS--ELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWT 75 RDPFKP C ++ +W+ +G++G+ + + +W +++ + + W Sbjct: 36 RRDPFKPFLLIPCNQGLDKIKKWKLKGVLGKENNYKAWVINQNGEWHQLKTKEFILTNWE 95 Query: 76 ILQLTPDVLTL 86 I ++T + + + Sbjct: 96 INKITLNRMNM 106 >UniRef50_C6C806 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech703 RepID=C6C806_DICDC Length = 123 Score = 83.7 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Query: 6 WLLAGIALCLLTGMRDPFKPPEDL-CRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRV 64 +LLAG T RDPF+P C + WR +G++G G R G ++ Q+ WRR+ Sbjct: 11 FLLAGAQA---TEWRDPFQPIASRACEQESAASWRLKGVIGDGLRWSGWLEQPQQAWRRI 67 Query: 65 QQNDVL-ENGWTILQLTPDVLTLGTGTN 91 + DVL GW ++QL Sbjct: 68 RLGDVLQPEGWRVVQLGRQGGVFRPEGG 95 >UniRef50_A8GKR0 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GKR0_SERP5 Length = 120 Score = 81.0 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 6/92 (6%) Query: 6 WLLAGIALCLLTGM--RDPFKP-PEDLCRIS-ELS-QWRYQGMVGRGERIIGVIKDGQKK 60 + L + L L+ RDPFKP P C I+ EL W+ +G +G+ + + Sbjct: 7 FWLLWLPLALMAQPQPRDPFKPLPLPDCPIAAELPVNWQLKGTIGQAALHHAWVVTTAGQ 66 Query: 61 WRRVQQNDVLENG-WTILQLTPDVLTLGTGTN 91 W R++ L +G W + Q+ +TL Sbjct: 67 WLRLKPQQTLLDGRWRVEQVVKGQVTLKANQG 98 >UniRef50_C4U8S3 Putative uncharacterized protein n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4U8S3_YERAL Length = 109 Score = 79.8 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Query: 19 MRDPFKPPED-LCR--ISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWT 75 RDPF+ C +L+ W+ QG+V G ++ W ++ +L W Sbjct: 18 GRDPFQAISTIPCDAQQEKLTDWQLQGVVSGVSYQSGWVRRPDGVWLKLIVGALLSANWQ 77 Query: 76 ILQLTPDVLTLG 87 + + + L Sbjct: 78 VSHIGSRQIRLQ 89 >UniRef50_C4UH35 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UH35_YERRU Length = 88 Score = 54.8 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 5/73 (6%) Query: 35 LSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTL---GTGTN 91 L W G+VG G + +W R+ ++ ++ GW + ++ L L + Sbjct: 14 LKGWVLLGVVGVEGAYRGWVSGRDGQWLRLATDEYVQAGWRVERIDLKQLDLYYENPDES 73 Query: 92 CE--PPQWLWQRQ 102 C P W Q Sbjct: 74 CVEAPRSLSWSLQ 86 >UniRef50_A2CCY9 Putative uncharacterized protein n=2 Tax=Prochlorococcus marinus RepID=A2CCY9_PROM3 Length = 175 Score = 40.9 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 16 LTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKKWR-----------RV 64 L G RDPF+P + + +G++ G + +++ +V Sbjct: 82 LAGRRDPFQPLVGATTSN---GFILKGVLVVGGQQRALVQTSDGSGALCVGPGGRCPGQV 138 Query: 65 QQNDVLENGWTILQLTPDV--LTLGTGTNCEPP 95 + + +L W++L + +TL G +PP Sbjct: 139 EADQLLPPSWSLLSIDVQRGCITLTQGGKSQPP 171 >UniRef50_Q48HA2 General secretion pathway protein GspN, putative n=6 Tax=Pseudomonas RepID=Q48HA2_PSE14 Length = 176 Score = 39.4 bits (90), Expect = 0.033, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 28 DLCRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLG 87 + + L+ G++ G + +IK +++Q D L NGWT+ +L P T Sbjct: 85 ADAQATSLAGLTLTGVIMDGSLRVALIKQASGPALKIRQGDRLPNGWTLDRLEPTQATFQ 144 >UniRef50_Q7MH81 Type IV pilus (Tfp) assembly protein PilP n=3 Tax=Vibrio RepID=Q7MH81_VIBVY Length = 170 Score = 39.0 bits (89), Expect = 0.048, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 9/82 (10%) Query: 20 RDPFKPPEDL----CRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVL-ENGW 74 +D ++PP LSQ R +G++G G I G+++ Q K +V + +N Sbjct: 78 KDCWQPPSRAKNGKLERYPLSQLRLKGVMGSGNTIAGLVQTPQGKVEKVHPGQFIGQNNG 137 Query: 75 TILQLTPDVL----TLGTGTNC 92 + +TP + TL G C Sbjct: 138 KVTVVTPSYILINETLPDGLGC 159 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4WFI0 Putative uncharacterized protein n=1 Tax=Enterob... 154 9e-37 UniRef50_P45750 Uncharacterized protein yrfA n=89 Tax=Enterobact... 153 1e-36 UniRef50_A7MKL5 Putative uncharacterized protein n=2 Tax=Cronoba... 149 2e-35 UniRef50_UPI000182682D hypothetical protein EcanA3_15607 n=1 Tax... 140 1e-32 UniRef50_C4X1Q3 Putative uncharacterized protein n=5 Tax=Klebsie... 126 2e-28 UniRef50_D0KBC0 Putative uncharacterized protein n=1 Tax=Pectoba... 108 4e-23 UniRef50_C6DGD7 Putative uncharacterized protein n=4 Tax=Pectoba... 107 9e-23 UniRef50_C8QE33 Putative uncharacterized protein n=1 Tax=Pantoea... 106 2e-22 UniRef50_C4RXP3 Putative uncharacterized protein n=2 Tax=Yersini... 94 1e-18 UniRef50_A1JSD6 Putative exported protein n=5 Tax=Yersinia RepID... 93 2e-18 UniRef50_A4TGT8 Membrane protein n=18 Tax=Yersinia RepID=A4TGT8_... 93 3e-18 UniRef50_D0FX02 Conserved uncharacterized protein n=3 Tax=Erwini... 92 5e-18 UniRef50_C6CH38 Putative uncharacterized protein n=1 Tax=Dickeya... 90 2e-17 UniRef50_C4K8E8 Putative uncharacterized protein n=1 Tax=Candida... 89 4e-17 UniRef50_D2BY41 Putative uncharacterized protein n=1 Tax=Dickeya... 89 5e-17 UniRef50_C6C806 Putative uncharacterized protein n=1 Tax=Dickeya... 86 3e-16 UniRef50_C4U8S3 Putative uncharacterized protein n=1 Tax=Yersini... 81 1e-14 UniRef50_A8GKR0 Putative uncharacterized protein n=1 Tax=Serrati... 80 2e-14 UniRef50_C4UH35 Putative uncharacterized protein n=1 Tax=Yersini... 71 8e-12 Sequences not found previously or not previously below threshold: UniRef50_A2CCY9 Putative uncharacterized protein n=2 Tax=Prochlo... 42 0.004 UniRef50_Q48HA2 General secretion pathway protein GspN, putative... 40 0.025 UniRef50_B8ESJ9 Putative uncharacterized protein n=1 Tax=Methylo... 39 0.048 UniRef50_Q7MH81 Type IV pilus (Tfp) assembly protein PilP n=3 Ta... 39 0.055 CONVERGED! >UniRef50_A4WFI0 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WFI0_ENT38 Length = 140 Score = 154 bits (388), Expect = 9e-37, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 MR + L +L LTGMRDPF PP D C I +L +W YQG++ ++G++KD Q + Sbjct: 8 MRTELRGLVLCSLVFLTGMRDPFHPPVDRCDIGKLDKWHYQGLISSAG-VVGIMKDEQDR 66 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 W R Q+D L +GW +L + + + G C+P +W W+R+G +E A Sbjct: 67 WHRAHQDDHLPSGWRVLAINEAEMVVEVGDGCDPKEWRWKREGTKDENNKDSQPASAVQH 126 Query: 121 RTGGKAAKSDADG 133 + +K+ G Sbjct: 127 VGLEQHSKTSDPG 139 >UniRef50_P45750 Uncharacterized protein yrfA n=89 Tax=Enterobacteriaceae RepID=YRFA_ECOLI Length = 134 Score = 153 bits (386), Expect = 1e-36, Method: Composition-based stats. Identities = 134/134 (100%), Positives = 134/134 (100%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK Sbjct: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR Sbjct: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 Query: 121 RTGGKAAKSDADGG 134 RTGGKAAKSDADGG Sbjct: 121 RTGGKAAKSDADGG 134 >UniRef50_A7MKL5 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MKL5_ENTS8 Length = 136 Score = 149 bits (376), Expect = 2e-35, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 56/133 (42%) Query: 2 RVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKKW 61 W+L +A C RDPF PP+ C++ + WRY GMV +G+ + +++ +K W Sbjct: 3 SSALWILLMLASCPAWAARDPFAPPQARCQLHQADLWRYGGMVKKGDSVRVLLQTPEKTW 62 Query: 62 RRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTRR 121 RV L GW + + + + L +G C P +W + ++ + R Sbjct: 63 LRVSPGATLPTGWQLTGVEANKVMLKSGDGCRPSVLVWTLKDTHHDKEIPSFIITRGDNR 122 Query: 122 TGGKAAKSDADGG 134 GG Sbjct: 123 FRRAHEPGRLAGG 135 >UniRef50_UPI000182682D hypothetical protein EcanA3_15607 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182682D Length = 121 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 4/125 (3%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 M L+ +L LTGMRDPF+PP D C +L QWRYQG V +G ++DGQ++ Sbjct: 1 MGHSMRLMIVASLVCLTGMRDPFQPPADTCLTGQLPQWRYQGKVND----VGFMQDGQQR 56 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR 120 W RV+Q+ L GW ++ + LT+ G C+P QW WQR+G V+ R Sbjct: 57 WHRVKQDQRLLPGWRVMAMDEQQLTVEVGETCDPRQWTWQREGTKKHEDKDSPAVNGPQR 116 Query: 121 RTGGK 125 G+ Sbjct: 117 VAVGR 121 >UniRef50_C4X1Q3 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=C4X1Q3_KLEPN Length = 127 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 69/110 (62%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK 60 M KRW+ + L LL RDPF+P ED CR ++LSQWRY G VG G ++DG K Sbjct: 1 MSGKRWIFLWLPLSLLAAERDPFQPVEDPCRTAQLSQWRYGGAVGDDAAWTGFLQDGNGK 60 Query: 61 WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMD 110 WRRV+ ++ L GW + +LT L + T + CEPP W WQR+G ++AMD Sbjct: 61 WRRVRMDEQLLTGWRVSRLTAGELDIVTSSGCEPPAWRWQREGKQHDAMD 110 >UniRef50_D0KBC0 Putative uncharacterized protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KBC0_PECWW Length = 126 Score = 108 bits (270), Expect = 4e-23, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 9/118 (7%) Query: 5 RWLLAGIALCLLTGMRDPFKPP-EDLC-RISELSQWRYQGMVGRGERIIGVIKDGQKKWR 62 ++L + DPF P C + L WR +G++G G+R IG + + W Sbjct: 13 LFVLHSVQAEKTVARIDPFHPLNAARCLPSATLPAWRLKGVIGSGDRWIGWLAQAEMGWV 72 Query: 63 RVQQNDVLENG-WTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADT 119 ++ + + G W + QL TL P G + + VD Sbjct: 73 KLTSGETIPPGNWVVSQLDKSGATL------VPTLREAGCDGLPDSLLLDSPFVDRPK 124 >UniRef50_C6DGD7 Putative uncharacterized protein n=4 Tax=Pectobacterium RepID=C6DGD7_PECCP Length = 125 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 9/118 (7%) Query: 5 RWLLAGIALCLLTGMRDPFKP-PEDLC-RISELSQWRYQGMVGRGERIIGVIKDGQKKWR 62 + + DPF+P C W+ +G++G GE +G + + W Sbjct: 13 LVVAHSVQAENPAARIDPFQPLVTTRCLPSERQPPWQLKGVIGSGEHWVGWLAQPEVGWV 72 Query: 63 RVQQNDVLENG-WTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADT 119 R+ + L G W + QL TL P G + + + ++ Sbjct: 73 RLVSGETLPPGNWVVSQLDKSGATL------VPTLREAACDGLPDSLLLASPFINKPE 124 >UniRef50_C8QE33 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QE33_9ENTR Length = 129 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 5/115 (4%) Query: 16 LTGMRDPFKPPE-DLCRISELS--QWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLEN 72 + RDPF+P LC+ + WR QG+VG + + ++ Q K R+ ++ L Sbjct: 15 MVLARDPFQPVAPALCQTAPAPPQGWRLQGIVGVPDHYVAWLRSPQGKNVRLMEHMQLPQ 74 Query: 73 -GWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDS-RTTVDADTRRTGGK 125 W + QLT L L C P Q ++ +G + + R T + Sbjct: 75 LPWRVQQLTARSLLLHVEQGCSPQQMQFRIKGGFYATDEGMAAAISGPERTTARQ 129 >UniRef50_C4RXP3 Putative uncharacterized protein n=2 Tax=Yersinia RepID=C4RXP3_YERBE Length = 114 Score = 93.7 bits (231), Expect = 1e-18, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 3/90 (3%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPED-LC--RISELSQWRYQGMVGRGERIIGVIKDG 57 + V L T R+PF+ C L+ W++QGMV + + Sbjct: 5 ITVALAPAVYAEPLLTTATRNPFQKVSAESCGSDRERLASWQFQGMVSGADYHSAWGRWP 64 Query: 58 QKKWRRVQQNDVLENGWTILQLTPDVLTLG 87 +++ L W + ++ +TL Sbjct: 65 DASGQKLVVGQQLLPNWQVTDISAQQVTLQ 94 >UniRef50_A1JSD6 Putative exported protein n=5 Tax=Yersinia RepID=A1JSD6_YERE8 Length = 125 Score = 93.3 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Query: 1 MRVKRWLLAGIALCLLTGMRDPFKPPE-DLCRISE--LSQWRYQGMVGRGERIIGVIKDG 57 + V ++ AG L R+PF+ C L+ WR QG+V + IG ++ Sbjct: 16 VAVSQFPAAGAESLLAEVGRNPFERISTASCDDDRKTLAGWRLQGIVRGADYHIGWVQRS 75 Query: 58 QKKWRRVQQNDVLENGWTILQLTPDVLTLG 87 + +W++V L W + ++ ++L Sbjct: 76 EGQWQKVAIETRLLPYWQVTHISERQVSLQ 105 >UniRef50_A4TGT8 Membrane protein n=18 Tax=Yersinia RepID=A4TGT8_YERPP Length = 142 Score = 92.9 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 3/89 (3%) Query: 9 AGIALCLLTGMRDPFKPPED-LCRISE--LSQWRYQGMVGRGERIIGVIKDGQKKWRRVQ 65 + L RDPF+ C L+ W+ G+V G I+ W+R+ Sbjct: 41 IFASPHLANIERDPFQAVLATSCDSERERLTGWKLHGVVSGGGYQSAWIQRPDATWQRLT 100 Query: 66 QNDVLENGWTILQLTPDVLTLGTGTNCEP 94 L + W + Q++ + P Sbjct: 101 LGMRLVSEWQVTQISAQWVDFQYENPETP 129 >UniRef50_D0FX02 Conserved uncharacterized protein n=3 Tax=Erwinia RepID=D0FX02_ERWPY Length = 120 Score = 92.2 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 19 MRDPFKPPED-LCR--ISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLE-NGW 74 RDPF PP+ LC+ S WR G++GR + + K R + D+L W Sbjct: 19 ARDPFFPPQSHLCQPLTPADSGWRLLGVIGRSDYYHAWLAASGGKTLRRKTGDLLPGTPW 78 Query: 75 TILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDA 117 + ++ TL +C+P Q +G + +VD Sbjct: 79 RVTRIDAHGTTLTPIQDCQPAQ-RLVLKG--RHNAQNSWSVDG 118 >UniRef50_C6CH38 Putative uncharacterized protein n=1 Tax=Dickeya zeae Ech1591 RepID=C6CH38_DICZE Length = 119 Score = 90.2 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Query: 7 LLAGIALCLLTGM---RDPFKPPE-DLCRISEL-SQWRYQGMVGRGERIIGVIKDGQKKW 61 L AG+ LC + RDPF+P C + + +W+ +GMVG + +G + Q W Sbjct: 9 LRAGLFLCCMGAEAVTRDPFQPLSTASCDDNPVKDKWQLKGMVGSSSQWVGWLFQPQSHW 68 Query: 62 RRVQQNDVLENG-WTILQLTPDVLTLGTGTN 91 RV+ DVL G W +++L + L T Sbjct: 69 LRVRDGDVLPLGDWQVMRLDRSGVVLRTTGG 99 >UniRef50_C4K8E8 Putative uncharacterized protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K8E8_HAMD5 Length = 135 Score = 89.1 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Query: 19 MRDPFKP-PEDLCRIS--ELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWT 75 RDPFKP C ++ +W+ +G++G+ + + +W +++ + + W Sbjct: 36 RRDPFKPFLLIPCNQGLDKIKKWKLKGVLGKENNYKAWVINQNGEWHQLKTKEFILTNWE 95 Query: 76 ILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDS 111 I ++T + + + + P +++ + Sbjct: 96 INKITLNRMNMNYISVYHP-----EKKDIHKHCEKN 126 >UniRef50_D2BY41 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech586 RepID=D2BY41_DICD5 Length = 138 Score = 88.7 bits (218), Expect = 5e-17, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 12 ALCLLTGMRDPFKPPED-LCRISELSQ-WRYQGMVGRGERIIGVIKDGQKKWRRVQQNDV 69 + + MRDPF+P + C + Q W+ +GMVG R I + Q W RV+ DV Sbjct: 36 PIVRESVMRDPFQPLSEMACNSGQDQQKWQLKGMVGSSSRWIAWLVQPQIGWLRVRDGDV 95 Query: 70 LENG-WTILQLTPDVLTLGTGT 90 + G W I QL TL Sbjct: 96 IPPGDWQITQLDHGGATLRKTD 117 >UniRef50_C6C806 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech703 RepID=C6C806_DICDC Length = 123 Score = 86.0 bits (211), Expect = 3e-16, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Query: 6 WLLAGIALCLLTGMRDPFKPPEDL-CRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRV 64 +LLAG T RDPF+P C + WR +G++G G R G ++ Q+ WRR+ Sbjct: 11 FLLAGAQ---ATEWRDPFQPIASRACEQESAASWRLKGVIGDGLRWSGWLEQPQQAWRRI 67 Query: 65 QQNDVL-ENGWTILQLTPDVLTLGTGTN 91 + DVL GW ++QL Sbjct: 68 RLGDVLQPEGWRVVQLGRQGGVFRPEGG 95 >UniRef50_C4U8S3 Putative uncharacterized protein n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4U8S3_YERAL Length = 109 Score = 81.0 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Query: 19 MRDPFKPPED-LCR--ISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWT 75 RDPF+ C +L+ W+ QG+V G ++ W ++ +L W Sbjct: 18 GRDPFQAISTIPCDAQQEKLTDWQLQGVVSGVSYQSGWVRRPDGVWLKLIVGALLSANWQ 77 Query: 76 ILQLTPDVLTLG 87 + + + L Sbjct: 78 VSHIGSRQIRLQ 89 >UniRef50_A8GKR0 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GKR0_SERP5 Length = 120 Score = 79.8 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 6/92 (6%) Query: 6 WLLAGIALCLLTGM--RDPFKP-PEDLCRIS-ELS-QWRYQGMVGRGERIIGVIKDGQKK 60 + L + L L+ RDPFKP P C I+ EL W+ +G +G+ + + Sbjct: 7 FWLLWLPLALMAQPQPRDPFKPLPLPDCPIAAELPVNWQLKGTIGQAALHHAWVVTTAGQ 66 Query: 61 WRRVQQNDVLENG-WTILQLTPDVLTLGTGTN 91 W R++ L +G W + Q+ +TL Sbjct: 67 WLRLKPQQTLLDGRWRVEQVVKGQVTLKANQG 98 >UniRef50_C4UH35 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UH35_YERRU Length = 88 Score = 71.4 bits (173), Expect = 8e-12, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 8/83 (9%) Query: 28 DLCRISE---LSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVL 84 C + L W G+VG G + +W R+ ++ ++ GW + ++ L Sbjct: 4 SPCENNAHHLLKGWVLLGVVGVEGAYRGWVSGRDGQWLRLATDEYVQAGWRVERIDLKQL 63 Query: 85 TL---GTGTNCE--PPQWLWQRQ 102 L +C P W Q Sbjct: 64 DLYYENPDESCVEAPRSLSWSLQ 86 >UniRef50_A2CCY9 Putative uncharacterized protein n=2 Tax=Prochlorococcus marinus RepID=A2CCY9_PROM3 Length = 175 Score = 42.5 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 16 LTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKKWR-----------RV 64 L G RDPF+P + + +G++ G + +++ +V Sbjct: 82 LAGRRDPFQPLVGATTSN---GFILKGVLVVGGQQRALVQTSDGSGALCVGPGGRCPGQV 138 Query: 65 QQNDVLENGWTILQLTPDV--LTLGTGTNCEPP 95 + + +L W++L + +TL G +PP Sbjct: 139 EADQLLPPSWSLLSIDVQRGCITLTQGGKSQPP 171 >UniRef50_Q48HA2 General secretion pathway protein GspN, putative n=6 Tax=Pseudomonas RepID=Q48HA2_PSE14 Length = 176 Score = 39.8 bits (91), Expect = 0.025, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%) Query: 28 DLCRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLG 87 + + L+ G++ G + +IK +++Q D L NGWT+ +L P T Sbjct: 85 ADAQATSLAGLTLTGVIMDGSLRVALIKQASGPALKIRQGDRLPNGWTLDRLEPTQATFQ 144 Query: 88 TGT 90 Sbjct: 145 LDG 147 >UniRef50_B8ESJ9 Putative uncharacterized protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ESJ9_METSB Length = 244 Score = 39.0 bits (89), Expect = 0.048, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 4/94 (4%) Query: 40 YQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLW 99 G+V E +G+ D K R++ + ++GWT+ ++P TL T + Sbjct: 143 LVGVVRGEEFSVGLFADQSGKSMRLRIGEADDDGWTVRSVSPRSATLEKET----REVTL 198 Query: 100 QRQGDTNEAMDSRTTVDADTRRTGGKAAKSDADG 133 + E A G + G Sbjct: 199 ELPARNAELASEPPPALAALNSAGEEHVNPRLRG 232 >UniRef50_Q7MH81 Type IV pilus (Tfp) assembly protein PilP n=3 Tax=Vibrio RepID=Q7MH81_VIBVY Length = 170 Score = 38.6 bits (88), Expect = 0.055, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%) Query: 16 LTGMRDPFKPPE----DLCRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVL- 70 +D ++PP LSQ R +G++G G I G+++ Q K +V + Sbjct: 74 PVVKKDCWQPPSRAKNGKLERYPLSQLRLKGVMGSGNTIAGLVQTPQGKVEKVHPGQFIG 133 Query: 71 ENGWTILQLTPDVL----TLGTGTNC 92 +N + +TP + TL G C Sbjct: 134 QNNGKVTVVTPSYILINETLPDGLGC 159 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.305 0.123 0.363 Lambda K H 0.267 0.0377 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 421,237,144 Number of Sequences: 3077464 Number of extensions: 11710406 Number of successful extensions: 39960 Number of sequences better than 1.0e-01: 25 Number of HSP's better than 0.1 without gapping: 45 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 39870 Number of HSP's gapped (non-prelim): 50 length of query: 134 length of database: 1,040,396,356 effective HSP length: 99 effective length of query: 35 effective length of database: 735,727,420 effective search space: 25750459700 effective search space used: 25750459700 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 87 (38.2 bits)