18 c1upaC_ Probab=100.00  E-value=0  Score=711.12  Aligned_columns=525  Identities=20%

Q ss_pred             CHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHH
Q ss_conf             08999999999869989998399850899999984799179980886889999999998628849999817405887689
Q batch____         4 TVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLIN   83 (572)
Q Consensus         4 t~ae~l~~~L~~~Gv~~vfg~pG~~~~~l~~al~~~~~i~~v~~~~E~~A~~~A~G~ar~tg~~~vv~~t~GpG~~n~~~   83 (572)
                      |++|+|++.|+++||++|||+||+++.+++++  ...+|++|.++||++|+|||+||+|++||++||++|+|||++|+++
T Consensus         2 tga~~l~~~L~~~Gv~~vfg~pG~~~~~ll~a--~~~~i~~i~~~~E~~A~~~A~gyar~tg~~~v~~~t~G~G~~n~~~   79 (547)
T c1upaC_           2 TAAHALLSRLRDHGVGKVFGVVGREAASILFD--EVEGIDFVLTRHEFTAGVAADVLARITGRPQACWATLGPGXTNLST   79 (547)
T ss_dssp             CHHHHHHHHHHHTTCCEEEECCCGGGGTCCSC--SSTTCEEEECSSHHHHHHHHHHHHHHHCSCEEEEECTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH--HHCCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHH
T ss_conf             88899999999859989998499722788885--2469889993986889999999998728829999926872687789


Q ss_pred             HHHHHHHHCCCEEEEECCCCHHHC-CCCCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCC-CCEEEEECC
Q ss_conf             999887618988999868996885-999875508898987313404105989999999999999997189-859998034
Q batch____        84 GLFDCHRNHVPVLAIAAHIPSSEI-GSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNR-GVSVVVLPG  161 (572)
Q Consensus        84 ~i~~A~~~~~Pli~I~g~~~~~~~-~~~~~Q~~d~~~l~~~~~k~~~~~~~~~~i~~~i~~A~~~a~~~~-gPv~i~ip~  161 (572)
                      ++++|+.+++|||+|+|++|.... +.+.+|+.||.++|++++||+.++.+++++.+.+++||+.+.+++ |||||++|.
T Consensus        80 ~l~~A~~~~~Pli~i~g~~p~~~~~~~~~~q~~d~~~~~~~~~k~~~~~~~~~~~~~~l~~A~~~a~~~~~gPv~i~ip~  159 (547)
T c1upaC_          80 GIATSVLDRSPVIALAAQSESHDIFPNDTHQCLDSVAIVAPXSKYAVELQRPHEITDLVDSAVNAAXTEPVGPSFISLPV  159 (547)
T ss_dssp             HHHHHHHHTCCEEEEEEESCGGGCCTTTSTTCCCHHHHHGGGSSEEEECCSGGGHHHHHHHHHHHHTBSSCCCEEEEEEH
T ss_pred             HHHHHHHHCCCEEEEECCCCHHHHCCCCCCHHHCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             99988760897899965787154067874101168988631034076249899999999999999733899739998150


Q ss_pred             HHHHCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCH--HHHHHHHHHHHHCCCCCCCCHHCCC
Q ss_conf             2540638854343-445566676789988999999999718986999888820--2799999999740466015610075
Q batch____       162 DVALKPAPEGATM-HWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCA--GAHKELVEFAGKIKAPIVHALRGKE  238 (572)
Q Consensus       162 dv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~akrpvil~G~g~~--~a~~~l~~lae~~~~pv~~t~~~~g  238 (572)
                      |++.++.+..... ...........+..+.+++++++|.++|||+|++|.++.  ++.+++.+|+|++++||++|+++++
T Consensus       160 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~rpvii~G~g~~~~~~~~~l~~lae~~~~pv~~t~~~~~  239 (547)
T c1upaC_         160 DLLGSSEGIDPPANTPAKPVGVVADGWQKAADQAAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKG  239 (547)
T ss_dssp             HHHTCCTTCCCCCCCCSSCBCCCCTTHHHHHHHHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSTTTT
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf             44057466654444565556777889989999999998717981999888747887999999999981992996012286


Q ss_pred             CCCCCCCCCCCCC-----CCCCCHHHHHHHHCCCEEEEECCCCCCCCC-----CCCCCEEEEEECCHHHCCCCCCCCEEE
Q ss_conf             6688887420333-----465788999999769879997774771001-----389970899818955809741452257
Q batch____       239 HVEYDNPYDVGMT-----GLIGFSSGFHTMMNADTLVLLGTQFPYRAF-----YPTDAKIIQIDINPASIGAHSKVDMAL  308 (572)
Q Consensus       239 ~~~~~hp~~~G~~-----g~~~~~~~~~~l~~~D~il~lG~~~~~~~~-----~~~~~~~i~id~d~~~~~~~~~~~~~~  308 (572)
                      ++|++||+++|.+     +..+....++.++++|+||.+|++++++.+     ...+.++|++|.++..+++.+..+..+
T Consensus       240 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~D~il~iG~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~i  319 (547)
T c1upaC_         240 VLPVGHELNYGAVTGYXDGILNFPALQTXFAPVDLVLTVGYDYAEDLRPSXWQKGIEKKTVRISPTVNPIPRVYRPDVDV  319 (547)
T ss_dssp             SSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEEEEETCCGGGSCCHHHHCCSSCCEEEEEESSCCSCTTTCCCSEEE
T ss_pred             CCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCHH
T ss_conf             55786733325110355433452234542124884999868457222454445578861899829845718633542012


Q ss_pred             ECCHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHH
Q ss_conf             33899999999985003--568146899999987535520001346-667989899999999967998599985871489
Q batch____       309 VGDIKSTLRALLPLVEE--KADRKFLDKALEDYRDARKGLDDLAKP-SEKAIHPQYLAQQISHFAADDAIFTCDVGTPTV  385 (572)
Q Consensus       309 ~~D~~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~i~~~d~G~~~~  385 (572)
                      ++|+..++++|.+.+..  .....|...+....+............ ....+.....+..+.+.++++++++.|+|++..
T Consensus       320 ~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~g~~~~  399 (547)
T c1upaC_         320 VTDVLAFVEHFETATASFGAKQRHDIEPLRARIAEFLADPETYEDGXRVHQVIDSXNTVXEEAAEPGEGTIVSDIGFFRH  399 (547)
T ss_dssp             ESCHHHHHHHHHHHTTTCCCCCCCCCHHHHHHHHHHHTCCCCCSSCBCHHHHHHHHHHHHHHHSCTTCCEEEECSSHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHH
T ss_conf             04799999999974102565420257899999876530011001356532110356665677507888389977754578


Q ss_pred             HHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHCCCCEEEEEEECCCCHH
Q ss_conf             89960646799879972652210114689999985288775999971614310958999999708983999985787413
Q batch____       386 WAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGF  465 (572)
Q Consensus       386 ~~~~~~~~~~p~~~~~~~~~~~mG~~~~~aiGa~la~p~~~vv~i~GDgsf~~~~~eL~ta~~~~~~i~iiV~nN~~~g~  465 (572)
                      |..++++...|.+++.+.++++||+++++++|++++.|+++|++++|||+|+|++|||+|++++++|+++||+||++|+|
T Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~mG~~l~~aiG~a~a~~~~~vv~i~GDgsf~~~~~~L~ta~~~~~~i~ivV~nN~~~~~  479 (547)
T c1upaC_         400 YGVLFARADQPFGFLTSAGCSSFGYGIPAAIGAQXARPDQPTFLIAGDGGFHSNSSDLETIARLNLPIVTVVVNNDTNGL  479 (547)
T ss_dssp             HHHHHCCCCSTTSEECCSSSCCTTCHHHHHHHHHHHSTTSCEEEEEEHHHHHHTGGGHHHHHHHTCCCEEEEEECSBCHH
T ss_pred             HHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHCCHHHHHHHHHCCCCEEEEEEECCCCHH
T ss_conf             88751517789769961765421104776762110279982899952345201979999999718983999984688513


Q ss_pred             HHHHHC--CCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             333310--25777677877899988999965981899689999999999999569988999876834
Q batch____       466 VAMEMK--AGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKE  530 (572)
Q Consensus       466 ~~~~~~--~~~~~~~~~~~~~~d~~~ia~a~G~~~~~V~~~~eL~~al~~a~~~~gp~lIev~vd~~  530 (572)
                      ++.++.  .......+++++++||+++|++||+++++|++++||+++|+++++.+||+||||+||||
T Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~G~~~~~v~~~~el~~al~~a~~~~gp~lieV~vd~d  546 (547)
T c1upaC_         480 IELYQNIGHHRSHDPAVKFGGVDFVALAEANGVDATRATNREELLAALRKGAELGRPFLIEVPVNYD  546 (547)
T ss_dssp             HHHHHHHHHSSCCGGGTBCCCCCHHHHHHHTTCEEEECCSHHHHHHHHHHHHHSSSCEEEEEEBCCC
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             2100112577876553567898988999965980899689999999999999569988999977899