228 d2gjsa1 Probab=99.05   E-value=1.7e-08  Score=67.88  Aligned_columns=148  Identities=18%

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHH
Q ss_conf             39999748989988999999998872388608986067675113322332102588882198569980786424641478
Q batch____        55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQR  134 (331)
Q Consensus        55 ~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~~~~  134 (331)
                      ++|.++|.+|||||||++++.                         ..+...................++.+.       
T Consensus         2 fKivivGd~~vGKTsli~r~~-------------------------t~~~~~~~~~~~~~~~~~~~~~~~~~~-------   49 (150)
T d2gjsa1           2 YKVLLLGAPGVGKSALARIFG-------------------------GVGHTYDRSIVVDGEEASLMVYDIWLP-------   49 (150)
T ss_dssp             EEEEEECCTTSSHHHHHHHHH-------------------------TCCEEEEEEEEETTEEEEEEEEECCCH-------
T ss_pred             EEEEEECCCCCCHHHHHHHHC-------------------------CCCEEEEEEEEEEEEEEEEEEECCCHH-------
T ss_conf             599998798978989976735-------------------------875123588997201355531002024-------


Q ss_pred             HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf             99999998625980999715332156888765188568722577655777655532069839997264678954568899
Q batch____       135 ARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIAR  214 (331)
Q Consensus       135 ~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~ivv~NK~D~~~~~~~~~~~  214 (331)
                          ..........+...+..-..........                ...........|.+++.||.|...........
T Consensus        50 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~i~~~~~k~d~~~~~~~~~~~  109 (150)
T d2gjsa1          50 ----GHCMAMGDAYVIVYSVTDKGSFEKASEL----------------RVQLRRARQDVPIILVGNKSDLVRSREVSVDE  109 (150)
T ss_dssp             ----HHHHTSCSEEEEEEETTCHHHHHHHHHH----------------HHHHHHHCCCCCEEEEEECTTCGGGCCSCHHH
T ss_pred             ----HHHHHHHHCCCCEEECCHHHHHHHHHHH----------------HHHHHHCCCCCEEEEEECCCCCCCCCCCCHHH
T ss_conf             ----6667642003200110201222333456----------------66653115763489850260001123343478


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             9999997432122016898279872147889899999999999530135
Q batch____       215 HMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTAS  263 (331)
Q Consensus       215 ~~~~~~l~~~~~~~~~~~~~vv~iSA~~g~Gi~eL~~~i~~~~~~~~~~  263 (331)
                      ..........         +.+.+||++|+||+++++.+.+......+.
T Consensus       110 ~~~~~~~~~~---------~~~e~SAktg~gV~e~f~~l~~~i~~~~~~  149 (150)
T d2gjsa1         110 GRACAVVFDC---------KFIETSAALHHNVQALFEGVVRQIRLRRDS  149 (150)
T ss_dssp             HHHHHHHHTS---------EEEECBTTTTBSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCC---------EEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             9989987698---------399985589989899999999999988754