224 d1vmaa2 Probab=99.05   E-value=3.4e-09  Score=71.95  Aligned_columns=173  Identities=18%

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCH
Q ss_conf             88739999748989988999999998872388608986067675113322332102588882198569980786424641
Q batch____        52 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGA  131 (331)
Q Consensus        52 ~~~~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~  131 (331)
                      .++.+++|+|++|||||||++.|++.+...|.++.++..||.....       ......+......+.....+...   .
T Consensus         9 ~~g~i~~i~G~nGsGKTTl~~~La~~~~~~~~~v~~~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~   78 (213)
T d1vmaa2           9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAA-------IEQLKIWGERVGATVISHSEGAD---P   78 (213)
T ss_dssp             SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHH-------HHHHHHHHHHHTCEEECCSTTCC---H
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH-------HHHHHHHHHHCCCCCCCCCCCCC---H
T ss_conf             9875999985998998999999999722079828991476423306-------88888865310232102577778---8


Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH---------------HHCCEEEEECCCCCCHHHHHHHHHHCCC--C
Q ss_conf             4789999999862598099971533215688876---------------5188568722577655777655532069--8
Q batch____       132 SQRARELMLLCEAAGYDVVIVETVGVGQSETEVA---------------RMVDCFISLQIAGGGDDLQGIKKGLMEV--A  194 (331)
Q Consensus       132 ~~~~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~---------------~~~d~~~~v~~~~~~~~~~~~~~~~~~~--~  194 (331)
                      ................+.+++|+.|..+......               ...+..+.+.+|................  .
T Consensus        79 ~~~~~~~~~~~~~~~~d~v~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~~~~~~~  158 (213)
T d1vmaa2          79 AAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNV  158 (213)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf             99999999999840461411220166545334433322457778766530566405620323458999999997101599


Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
Q ss_conf             3999726467895456889999999974321220168982798721478898999
Q batch____       195 DLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEI  249 (331)
Q Consensus       195 ~ivv~NK~D~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv~iSA~~g~Gi~eL  249 (331)
                      .++++||.|....-......-.-.             +.|+++++  +|+.++++
T Consensus       159 ~~ii~t~~de~~~~~~~l~~~~~~-------------~~~v~~~~--~gq~v~di  198 (213)
T d1vmaa2         159 TGIILTKLDGTAKGGITLAIAREL-------------GIPIKFIG--VGEKAEDL  198 (213)
T ss_dssp             CEEEEECGGGCSCTTHHHHHHHHH-------------CCCEEEEE--CSSSGGGE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHH-------------CCEEEEEE--CCCCHHHE
T ss_conf             699997881344478999999973-------------89099981--67741130