271 c3cpjB_ Probab=98.80   E-value=2e-07  Score=61.61  Aligned_columns=152  Identities=18%

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHH
Q ss_conf             39999748989988999999998872388608986067675113322332102588882198569980786424641478
Q batch____        55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQR  134 (331)
Q Consensus        55 ~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~~~~  134 (331)
                      ++|+++|.+|||||||+++++...-..+...-.                    ...............+..+...     
T Consensus         5 ~KIvivG~~~vGKTsLi~r~~~~~f~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~-----   59 (164)
T c3cpjB_           5 FKIVLIGDSGVGKSNLLSRFTKNEFNMGVEFAT--------------------RTLEIEGKRIKAQIWDTAGQER-----   59 (164)
T ss_dssp             EEEEEESCTTSSHHHHHHHHHHCCCCCCCSEEE--------------------EEEEETTEEEEEEEECCTTTTT-----
T ss_pred             EEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEE--------------------EEEECCCEEEEEEECCCCCCCC-----
T ss_conf             999998798988999999998078987436455--------------------5430288189763012222210-----


Q ss_pred             HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCC-----HHHHHHHHHHCCCCEEEEEECCCCCCHHH
Q ss_conf             9999999862598099971533215688876518856872257765-----57776555320698399972646789545
Q batch____       135 ARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG-----DDLQGIKKGLMEVADLIVINKDDGDNHTN  209 (331)
Q Consensus       135 ~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~-----~~~~~~~~~~~~~~~ivv~NK~D~~~~~~  209 (331)
                                            ............+..+.+.+....     .............+.+++.||+|+.....
T Consensus        60 ----------------------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~~k~d~~~~~~  117 (164)
T c3cpjB_          60 ----------------------YRAITSAYYRGAVGALIVYDSKSSSYENCNHWLSELRENADVAVGLIGNKSDLAHLRA  117 (164)
T ss_dssp             ----------------------TTCCCGGGTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCGGGGGGCC
T ss_pred             ----------------------CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC
T ss_conf             ----------------------0111112233553899841453110012221112100123443044101256712556


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             688999999997432122016898279872147889899999999999530135
Q batch____       210 VAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTAS  263 (331)
Q Consensus       210 ~~~~~~~~~~~l~~~~~~~~~~~~~vv~iSA~~g~Gi~eL~~~i~~~~~~~~~~  263 (331)
                      ...........         ..+.|.+.+||+ +.||+++++.|.+..-....+
T Consensus       118 ~~~~~~~~~a~---------~~~~~~~e~SAk-~~~V~e~f~~i~~~i~~k~~~  161 (164)
T c3cpjB_         118 VPTEESKTFAQ---------ENQLLFTETSAL-SENVDKAFEELINTIYQKVPT  161 (164)
T ss_dssp             SCHHHHHHHHH---------HTTCEEEECCCC-CCCHHHHHHHHHHHHTTCCCC
T ss_pred             CCHHHHHHHHH---------HCCCEEEEECCC-CCCHHHHHHHHHHHHHHHCCC
T ss_conf             77899999999---------769829998527-889899999999999986488