235 c2bovA_ Probab=99.02   E-value=2.9e-08  Score=66.48  Aligned_columns=161  Identities=17%

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHH
Q ss_conf             39999748989988999999998872388608986067675113322332102588882198569980786424641478
Q batch____        55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQR  134 (331)
Q Consensus        55 ~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~~~~  134 (331)
                      ++|+|+|.||||||||+|+++.         ......-.+|         ..............................
T Consensus         5 ~KIvivG~~~vGKTSLi~~~~~---------~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (173)
T c2bovA_           5 HKVIMVGSGGVGKSALTLQFMY---------DEFVEDYEPT---------KADSYRKKVVLDGEEVQIDILDTAGQEDYA   66 (173)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHH---------SCCCTTCCTT---------CCEEEEEEEEETTEEEEEEEEECCCTTCCH
T ss_pred             EEEEEECCCCCCHHHHHHHHHH---------CCCCCCCCCC---------CEEECEECCCCCCEEEEEECCCCCCCCCHH
T ss_conf             7999987989899999999980---------8467875542---------000000001246415664112554210001


Q ss_pred             HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf             99999998625980999715332156888765188568722577655777655532069839997264678954568899
Q batch____       135 ARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIAR  214 (331)
Q Consensus       135 ~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~ivv~NK~D~~~~~~~~~~~  214 (331)
                      ...............+................               ............+.+++.||.|...........
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (173)
T c2bovA_          67 AIRDNYFRSGEGFLCVFSITEMESFAATADFR---------------EQILRVKEDENVPFLLVGNKSDLEDKRQVSVEE  131 (173)
T ss_dssp             HHHHHHHHHCSEEEEEEETTCHHHHHHHHHHH---------------HHHHHHTTCSCCCEEEEEECTTCGGGCCSCHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH---------------HHHHHCCCCCCCEEEEECCCCCCHHHCCCCHHH
T ss_conf             11111223211100134346533034432212---------------221100357774156403455403201144799


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             9999997432122016898279872147889899999999999
Q batch____       215 HMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFK  257 (331)
Q Consensus       215 ~~~~~~l~~~~~~~~~~~~~vv~iSA~~g~Gi~eL~~~i~~~~  257 (331)
                      ......-.         +.+.+.+||++|+||+++++.+.+..
T Consensus       132 ~~~~~~~~---------~~~~~e~SAk~g~gi~e~f~~l~~~i  165 (173)
T c2bovA_         132 AKNRAEQW---------NVNYVETSAKTRANVDKVFFDLMREI  165 (173)
T ss_dssp             HHHHHHHH---------TCEEEEECTTTCTTHHHHHHHHHHHH
T ss_pred             HHHHHHHC---------CCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             99999977---------98399974689889899999999999