256 c2atvA_ Probab=98.93   E-value=3.4e-08  Score=66.06  Aligned_columns=160  Identities=18%

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHH
Q ss_conf             39999748989988999999998872388608986067675113322332102588882198569980786424641478
Q batch____        55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQR  134 (331)
Q Consensus        55 ~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~~~~  134 (331)
                      +.|+++|.+|||||||+++++..                 .+.............................+........
T Consensus         3 ~KivivG~~~vGKTsLi~~~~~~-----------------~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (168)
T c2atvA_           3 VKLAIFGRAGVGKSALVVRFLTK-----------------RFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTIQ   65 (168)
T ss_dssp             EEEEEECCTTSSHHHHHHHHHHS-----------------CCCSCCCTTCCEEEEEEEEETTEEEEEEEEECCCCCCCHH
T ss_pred             EEEEEECCCCCCHHHHHHHHHHC-----------------CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf             39999869898999999999818-----------------3678743200121100001366125665521453211111


Q ss_pred             HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf             99999998625980999715332156888765188568722577655777655532069839997264678954568899
Q batch____       135 ARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIAR  214 (331)
Q Consensus       135 ~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~ivv~NK~D~~~~~~~~~~~  214 (331)
                      .............................                 .............+.+++.||+|...........
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~~~~k~d~~~~~~~~~~~  128 (168)
T c2atvA_          66 REGHMRWGEGFVLVYDITDRGSFEEVLPL-----------------KNILDEIKKPKNVTLILVGNKADLDHSRQVSTEE  128 (168)
T ss_dssp             HHHHHHHCSEEEEEEETTCHHHHHTHHHH-----------------HHHHHHHHTTSCCCEEEEEECGGGGGGCCSCHHH
T ss_pred             CCCCCCCCCCEEEECCCCCCCCCHHHHHH-----------------HHHHHHHCCCCCCCEEECCCCCCHHHHCCCCHHH
T ss_conf             22332122311210110112330011000-----------------1356763156776033036553101110243589


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECCCCCC-HHHHHHHHHHHH
Q ss_conf             9999997432122016898279872147889-899999999999
Q batch____       215 HMYESALHILRRKYDEWQPRVLTCSALEKRG-IDEIWHAIIDFK  257 (331)
Q Consensus       215 ~~~~~~l~~~~~~~~~~~~~vv~iSA~~g~G-i~eL~~~i~~~~  257 (331)
                      ......         .++.+.+.+||++|+| |+++++.+.+..
T Consensus       129 ~~~~~~---------~~~~~~~e~SAktg~gnV~e~f~~l~~~i  163 (168)
T c2atvA_         129 GEKLAT---------ELACAFYECSACTGEGNITEIFYELCREV  163 (168)
T ss_dssp             HHHHHH---------HHTSEEEECCTTTCTTCHHHHHHHHHHHH
T ss_pred             HHHHHH---------HCCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf             999999---------74981999970688851899999999999