17 c1mkyA_ Probab=99.87   E-value=3.6e-20  Score=136.04  Aligned_columns=157  Identities=24%

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCH
Q ss_conf             88739999748989988999999998872388608986067675113322332102588882198569980786424641
Q batch____        52 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGA  131 (331)
Q Consensus        52 ~~~~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~  131 (331)
                      ...+.|+++|.||+|||||+|+|+      |.+..+++..++++               .....+..+...||+|+....
T Consensus       163 ~~~~~iaiiG~~n~GKSSLin~l~------~~~~~~vs~~~~~~---------------~~~~~~~~~~l~Dt~G~~~~~  221 (407)
T c1mkyA_         163 TDAIKVAIVGRPNVGKSTLFNAIL------NKERALVSPIPVDD---------------EVFIDGRKYVFVDTAGLEKYS  221 (407)
T ss_dssp             CSCEEEEEECSTTSSHHHHHHHHH------TSTTEEECCCCCCE---------------EEEETTEEEEESSCSCCCCSC
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHC------CCCEEEEECCCCCC---------------CCCCCCEEEEEECCCCHHHHH
T ss_conf             432100023766665265888740------88426862044322---------------011298589983289888889


Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCC----HHHHHHHHHHCCCCEEEEEECCCCCCH
Q ss_conf             4789999999862598099971533215688876518856872257765----577765553206983999726467895
Q batch____       132 SQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG----DDLQGIKKGLMEVADLIVINKDDGDNH  207 (331)
Q Consensus       132 ~~~~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~----~~~~~~~~~~~~~~~ivv~NK~D~~~~  207 (331)
                      ......+++                          .+|.+++++|...+    +..........++|.++|+||+|+.+.
T Consensus       222 ~~~~~~~~~--------------------------~adv~i~v~D~~~~~~~~d~~~~~~~~~~~~p~iiv~NK~Dl~~~  275 (407)
T c1mkyA_         222 NYRVVDSIE--------------------------KADVVVIVLDATQGITRQDQRXAGLXERRGRASVVVFNKWDLVVH  275 (407)
T ss_dssp             CHHHHHHHH--------------------------HCSEEEEEEETTTCCCHHHHHHHHHHHHTTCEEEEEEECGGGSTT
T ss_pred             HHHHHHHHC--------------------------CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf             999998624--------------------------288899999679888998999999999759959999995207666


Q ss_pred             HHH--HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             456--889999999974321220168982798721478898999999999995301
Q batch____       208 TNV--AIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALT  261 (331)
Q Consensus       208 ~~~--~~~~~~~~~~l~~~~~~~~~~~~~vv~iSA~~g~Gi~eL~~~i~~~~~~~~  261 (331)
                      ...  ....+.+...+.      ...+.|++++||++|.|++++++.+.+.+....
T Consensus       276 ~~~~~~~~~~~~~~~~~------~~~~~~v~~vSAk~g~gv~~l~~~~~~~~~~~~  325 (407)
T c1mkyA_         276 REKRYDEFTKLFREKLY------FIDYSPLIFTSADKGWNIDRXIDAXNLAYASYT  325 (407)
T ss_dssp             GGGCHHHHHHHHHHHCG------GGTTSCEEECBTTTTBSHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHH------HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf             21449999999998841------069984999857798998898999999999802