74 c1jalA_ Probab=99.63   E-value=2.6e-15  Score=107.70  Aligned_columns=174  Identities=22%

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHH
Q ss_conf             73999974898998899999999887238860898606767511332233210258888219856998078642464147
Q batch____        54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQ  133 (331)
Q Consensus        54 ~~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~~~  133 (331)
                      ++.|||+|.||||||||+|+|++     .+.-+-+.+.+|...-..........+.......+..+..+|+||+..+...
T Consensus         2 ~~~iglvG~pn~GKSTl~n~LT~-----~~pf~Ti~pn~g~v~v~d~~~~~~~~~~~~~~~~~~~i~liD~pGl~~~a~~   76 (348)
T c1jalA_           2 GFKCGIVGLPNVGKSTLFNALTK-----AGPFCTIEPNTGVVPMPDPRLDALAEIVKPERILPTTMEFVDIAGLVAGASK   76 (348)
T ss_dssp             CCEEEEECCTTSSHHHHHHHHHH-----TCCCCCCCCCSSEEECCCHHHHHHHHHHCCSEEECCEEEEEECCSCCTTHHH
T ss_pred             CEEEEEEECCCCCHHHHHHHHHC-----CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
T ss_conf             42899963889889899999957-----8986433662069995686752000123555457805999975765578642


Q ss_pred             HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCC---------------------------------
Q ss_conf             89999999862598099971533215688876518856872257765---------------------------------
Q batch____       134 RARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG---------------------------------  180 (331)
Q Consensus       134 ~~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~---------------------------------  180 (331)
                      .                    .|.+......+..+|..+++++...+                                 
T Consensus        77 g--------------------~~~~~~~l~~ir~aD~ii~Vvd~~~~~dp~~d~~~i~~EL~~~d~~~~~k~~~~~~~~~  136 (348)
T c1jalA_          77 G--------------------EGLGNKFLANIRETDAIGHVVRCFENIDPLDDIDTINTELALADLDSCERAIQRLQKRA  136 (348)
T ss_dssp             H--------------------GGGTCCHHHHHHTCSEEEEEEECSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--------------------HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf             1--------------------03799999999748989999505889987899999999998608887631278886421


Q ss_pred             ------------------------------------HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             ------------------------------------57776555320698399972646789545688999999997432
Q batch____       181 ------------------------------------DDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHIL  224 (331)
Q Consensus       181 ------------------------------------~~~~~~~~~~~~~~~ivv~NK~D~~~~~~~~~~~~~~~~~l~~~  224 (331)
                                                          ............+|.++|+||+|........         +...
T Consensus       137 ~~~~~~~~~~~~~l~~i~~~l~~~~~~~~~~l~~~e~~~l~~~~~l~~KP~i~v~Nk~d~~~~~~~~---------~~~i  207 (348)
T c1jalA_         137 KGGDKEAKFELSVMEKILPVLENAGMIRSVGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPY---------LDRV  207 (348)
T ss_dssp             TTTCHHHHHHHHHHHHHHHHHHTTCCGGGSCCCHHHHHHHGGGCCSTTSCEEEEEECCTTCSSSCHH---------HHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCHH---------HHHH
T ss_conf             0256652136899999997310244333346898899998643311007889999711036553237---------8999


Q ss_pred             HHHHCCCCCCEEEEEC----------------------CCCCCHHHHHHHHHHHHHHHC
Q ss_conf             1220168982798721----------------------478898999999999995301
Q batch____       225 RRKYDEWQPRVLTCSA----------------------LEKRGIDEIWHAIIDFKTALT  261 (331)
Q Consensus       225 ~~~~~~~~~~vv~iSA----------------------~~g~Gi~eL~~~i~~~~~~~~  261 (331)
                      .......+.+++++||                      .++.|+++|.+.+.+.+....
T Consensus       208 ~~~~~~~~~~vi~vsa~~E~el~~l~~~e~~~~l~~~~i~~~~l~~l~~~~~~~L~li~  266 (348)
T c1jalA_         208 REIAAKEGAVVVPVCAAIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYALLNLQT  266 (348)
T ss_dssp             HHHHHHTTCEEEEECHHHHHHGGGSCSSTTHHHHTTSSCCSCTTHHHHHHHHHHTTEEE
T ss_pred             HHHHHCCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             99851379829997389999887337556688776708762148999999985218534