411 c1cipA_ Probab=97.40   E-value=0.0024  Score=37.74  Aligned_columns=178  Identities=16%

Q ss_pred             CCEEEEEECCCCCCHHHHHHHH----------------------------------------------------------
Q ss_conf             8739999748989988999999----------------------------------------------------------
Q batch____        53 NTLRLGVTGTPGAGKSTFLEAF----------------------------------------------------------   74 (331)
Q Consensus        53 ~~~~Vai~G~pnaGKSTLln~L----------------------------------------------------------   74 (331)
                      +.++|-+.|..++||||++..+                                                          
T Consensus         1 k~ikiLlLG~~eSGKST~~kQ~r~l~~~~~~~~E~~~~~~~I~~Nii~~~~~ll~a~~~~~i~~~~~~~~~~~~~~~~~~   80 (316)
T c1cipA_           1 REVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAARADDARQLFVLA   80 (316)
T ss_dssp             CEEEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTCCCSSTTHHHHHHHHHHHH
T ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf             90399997589988889999999985889998999987999999999999999999986099988710178899987246


Q ss_pred             ----------------------------------------HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEC
Q ss_conf             ----------------------------------------9988723886089860676751133223321025888821
Q batch____        75 ----------------------------------------GMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARA  114 (331)
Q Consensus        75 ----------------------------------------~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~  114 (331)
                                                              +.++-..-.+++--.-.|+-.--..+...-.-..+.....
T Consensus        81 ~~~~~~~~~~e~~~~I~~LW~d~~iq~~~~r~~~~~l~d~~~YFl~~~~rI~~~~Y~Pt~~Dil~~r~~T~Gi~~~~f~~  160 (316)
T c1cipA_          81 GAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTF  160 (316)
T ss_dssp             HHHTTTCCCHHHHHHHHHHHHCHHHHHHHTTGGGSCCCTTHHHHHTTHHHHTSTTCCCCHHHHHTCCCCCCSEEEEEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEE
T ss_conf             77764337889999999996798999998744302543555667754888613677868410278763602408999985


Q ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCH-------------
Q ss_conf             9856998078642464147899999998625980999715332156888765188568722577655-------------
Q batch____       115 EAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGD-------------  181 (331)
Q Consensus       115 ~~~~i~~~~t~g~~~~~~~~~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~~-------------  181 (331)
                      ++..+...|.+|...                           ....-......++.++++++....+             
T Consensus       161 ~~~~~~~~DvgGq~~---------------------------~R~kW~~~f~~~~~iif~v~ls~~d~~~~e~~~~nrl~  213 (316)
T c1cipA_         161 KDLHFKMFDVGGQRS---------------------------ERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMH  213 (316)
T ss_dssp             TTEEEEEEEECCSGG---------------------------GGGGGGGGCTTCSEEEEEEEGGGGGCEETTEEEEEHHH
T ss_pred             CCEEEEEEECCCCCC---------------------------CHHHHHHHHCCCCEEEEEEECHHCCCCCCCCCCCHHHH
T ss_conf             260688985688862---------------------------10237887179977999977013022222566401599


Q ss_pred             ------HHHHHHHHHCCCCEEEEEECCCC-----------------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             ------77765553206983999726467-----------------8954568899999999743212201689827987
Q batch____       182 ------DLQGIKKGLMEVADLIVINKDDG-----------------DNHTNVAIARHMYESALHILRRKYDEWQPRVLTC  238 (331)
Q Consensus       182 ------~~~~~~~~~~~~~~ivv~NK~D~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv~i  238 (331)
                            +-....+...+.|.++++||.|+                 .++.........+................-+..+
T Consensus       214 esl~~f~~i~~~~~~~~~~iil~~nK~Dif~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~~~~~~t  293 (316)
T c1cipA_         214 ESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFT  293 (316)
T ss_dssp             HHHHHHHHHHTCGGGTTSEEEEEEECHHHHHHHHTTSCGGGTCTTCCSCSCHHHHHHHHHHHHHTTCSCTTTCCEEEEEC
T ss_pred             HHHHHHHHHHCCHHHCCCCEEEEECCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf             99999999838957769978999125589987612288011176888857989999999999998632888973899998


Q ss_pred             ECCCCCCHHHHHHHHHHHH
Q ss_conf             2147889899999999999
Q batch____       239 SALEKRGIDEIWHAIIDFK  257 (331)
Q Consensus       239 SA~~g~Gi~eL~~~i~~~~  257 (331)
                      ||....++...++.+.+..
T Consensus       294 ~a~d~~~i~~~~~~v~~~I  312 (316)
T c1cipA_         294 CATDTKNVQFVFDAVTDVI  312 (316)
T ss_dssp             CTTCHHHHHHHHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHHHHH
T ss_conf             5121468999999999976