BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (384 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q8D1Y5 Ribosomal RNA large subunit methyltransferase N ... 448 e-124 UniRef50_Q6FEM6 Ribosomal RNA large subunit methyltransferase N ... 432 e-119 UniRef50_B7H072 Ribosomal RNA large subunit methyltransferase N ... 421 e-116 UniRef50_B2U9U6 Ribosomal RNA large subunit methyltransferase N ... 400 e-110 UniRef50_Q5P7B0 Ribosomal RNA large subunit methyltransferase N ... 397 e-109 UniRef50_Q3BTW5 Ribosomal RNA large subunit methyltransferase N ... 395 e-108 UniRef50_A4SYE2 Ribosomal RNA large subunit methyltransferase N ... 367 e-100 UniRef50_A5CX33 Ribosomal RNA large subunit methyltransferase N ... 359 1e-97 UniRef50_B5EJF0 Radical SAM enzyme, Cfr family n=2 Tax=Acidithio... 336 1e-90 UniRef50_B6BF31 Radical SAM enzyme, Cfr family n=1 Tax=Rhodobact... 334 4e-90 UniRef50_Q2N9J2 Ribosomal RNA large subunit methyltransferase N ... 320 5e-86 UniRef50_Q2W897 Ribosomal RNA large subunit methyltransferase N ... 306 7e-82 UniRef50_B0UQR1 Ribosomal RNA large subunit methyltransferase N ... 303 7e-81 UniRef50_Q3SNT2 Ribosomal RNA large subunit methyltransferase N ... 302 2e-80 UniRef50_Q2LUM5 Ribosomal RNA large subunit methyltransferase N ... 298 3e-79 UniRef50_Q6ALW1 Ribosomal RNA large subunit methyltransferase N ... 293 8e-78 UniRef50_D0LIH5 Radical SAM enzyme, Cfr family n=2 Tax=Nannocyst... 289 9e-77 UniRef50_Q3A2Z4 Ribosomal RNA large subunit methyltransferase N ... 286 7e-76 UniRef50_B8CWT1 Radical SAM enzyme, Cfr family n=2 Tax=Firmicute... 285 2e-75 UniRef50_A1VAL8 Ribosomal RNA large subunit methyltransferase N ... 285 3e-75 UniRef50_A8ZV25 Ribosomal RNA large subunit methyltransferase N ... 282 2e-74 UniRef50_D0RN88 Radical SAM enzyme, Cfr family n=1 Tax=alpha pro... 281 2e-74 UniRef50_Q1D6I6 Ribosomal RNA large subunit methyltransferase N ... 281 4e-74 UniRef50_B8DRU2 Ribosomal RNA large subunit methyltransferase N ... 277 4e-73 UniRef50_Q7UHU7 Ribosomal RNA large subunit methyltransferase N ... 276 7e-73 UniRef50_Q6MPV7 Ribosomal RNA large subunit methyltransferase N ... 270 7e-71 UniRef50_C6I0U3 Radical SAM family protein n=3 Tax=Leptospirillu... 269 1e-70 UniRef50_Q54J76 Putative uncharacterized protein n=1 Tax=Dictyos... 269 1e-70 UniRef50_Q7X370 Putative uncharacterized protein n=2 Tax=uncultu... 268 3e-70 UniRef50_Q0AXL8 Ribosomal RNA large subunit methyltransferase N ... 267 4e-70 UniRef50_C1TNK6 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=De... 267 5e-70 UniRef50_Q11QF0 Ribosomal RNA large subunit methyltransferase N ... 265 2e-69 UniRef50_D1Y601 23S rRNA m2A2503 methyltransferase n=1 Tax=Pyram... 264 4e-69 UniRef50_B5YF42 Ribosomal RNA large subunit methyltransferase N ... 263 9e-69 UniRef50_C0GIQ5 Radical SAM enzyme, Cfr family n=1 Tax=Dethiobac... 262 1e-68 UniRef50_C4Z523 Ribosomal RNA large subunit methyltransferase N ... 258 3e-67 UniRef50_A6TRW3 Ribosomal RNA large subunit methyltransferase N ... 254 5e-66 UniRef50_C1A949 Ribosomal RNA large subunit methyltransferase N ... 254 5e-66 UniRef50_Q2S0P9 Ribosomal RNA large subunit methyltransferase N ... 254 5e-66 UniRef50_B5YHG3 Radical SAM enzyme, Cfr family n=1 Tax=Thermodes... 253 7e-66 UniRef50_D2R822 Radical SAM enzyme, Cfr family n=1 Tax=Pirellula... 253 1e-65 UniRef50_Q0F1H4 Radical SAM superfamily protein n=1 Tax=Mariprof... 252 2e-65 UniRef50_Q6MDD0 Ribosomal RNA large subunit methyltransferase N ... 251 4e-65 UniRef50_C9M5U8 Radical SAM enzyme, Cfr family n=1 Tax=Jonquetel... 249 1e-64 UniRef50_Q72HC1 Ribosomal RNA large subunit methyltransferase N ... 248 3e-64 UniRef50_A3DCX9 Ribosomal RNA large subunit methyltransferase N ... 248 4e-64 UniRef50_C5CGV5 Radical SAM enzyme, Cfr family n=1 Tax=Kosmotoga... 246 1e-63 UniRef50_A9WFY6 Ribosomal RNA large subunit methyltransferase N ... 245 2e-63 UniRef50_C0BG68 Radical SAM enzyme, Cfr family n=1 Tax=Flavobact... 245 2e-63 UniRef50_O80746 T13D8.12 protein n=9 Tax=Spermatophyta RepID=O80... 244 4e-63 UniRef50_A7HNQ1 Ribosomal RNA large subunit methyltransferase N ... 244 5e-63 UniRef50_D1PM67 Radical SAM enzyme, Cfr family n=1 Tax=Subdoligr... 243 6e-63 UniRef50_O66732 Ribosomal RNA large subunit methyltransferase N ... 243 6e-63 UniRef50_A9S1C9 Predicted protein n=1 Tax=Physcomitrella patens ... 243 9e-63 UniRef50_B9KXX2 Radical SAM enzyme, Cfr family n=2 Tax=Thermomic... 242 2e-62 UniRef50_Q3ASD4 Ribosomal RNA large subunit methyltransferase N ... 241 3e-62 UniRef50_Q01QF9 Ribosomal RNA large subunit methyltransferase N ... 240 5e-62 UniRef50_A5D1B6 Ribosomal RNA large subunit methyltransferase N ... 240 8e-62 UniRef50_Q2RK16 Ribosomal RNA large subunit methyltransferase N ... 239 9e-62 UniRef50_D1B0V3 Radical SAM enzyme, Cfr family n=10 Tax=Campylob... 239 1e-61 UniRef50_B0TGT1 Ribosomal RNA large subunit methyltransferase N ... 239 1e-61 UniRef50_A9KM95 Ribosomal RNA large subunit methyltransferase N ... 238 3e-61 UniRef50_A7ZGB0 Ribosomal RNA large subunit methyltransferase N ... 238 3e-61 UniRef50_B1H070 Ribosomal RNA large subunit methyltransferase N ... 237 6e-61 UniRef50_B2RMI0 Ribosomal RNA large subunit methyltransferase N ... 236 1e-60 UniRef50_Q8RFZ9 Ribosomal RNA large subunit methyltransferase N ... 235 2e-60 UniRef50_D2RNU4 Radical SAM enzyme, Cfr family n=1 Tax=Acidamino... 235 2e-60 UniRef50_Q1Q215 Putative uncharacterized protein n=1 Tax=Candida... 235 2e-60 UniRef50_B9XSY7 Radical SAM enzyme, Cfr family n=1 Tax=bacterium... 234 4e-60 UniRef50_D1BMC5 Radical SAM enzyme, Cfr family n=3 Tax=Veillonel... 234 5e-60 UniRef50_B3QS43 Ribosomal RNA large subunit methyltransferase N ... 234 5e-60 UniRef50_C5EIZ2 Radical SAM enzyme n=11 Tax=Clostridiales RepID=... 233 7e-60 UniRef50_Q3AC22 Ribosomal RNA large subunit methyltransferase N ... 233 1e-59 UniRef50_Q0F2U6 Putative uncharacterized protein n=1 Tax=Maripro... 233 1e-59 UniRef50_C9KJ31 Radical SAM enzyme, Cfr family n=1 Tax=Mitsuokel... 232 2e-59 UniRef50_C7NA88 Radical SAM enzyme, Cfr family n=5 Tax=Fusobacte... 232 2e-59 UniRef50_D1CBZ4 Radical SAM enzyme, Cfr family n=1 Tax=Thermobac... 231 2e-59 UniRef50_Q2J713 Ribosomal RNA large subunit methyltransferase N ... 231 2e-59 UniRef50_C0WD85 Ribosomal RNA large subunit methyltransferase N ... 231 3e-59 UniRef50_B0VIB4 Putative radical SAM-dependent enzyme (YfgB) n=1... 230 6e-59 UniRef50_Q1DCU1 Ribosomal RNA large subunit methyltransferase N ... 230 6e-59 UniRef50_D1B6H8 Radical SAM enzyme, Cfr family n=1 Tax=Thermanae... 229 9e-59 UniRef50_B9E1E5 Putative uncharacterized protein n=2 Tax=Clostri... 229 1e-58 UniRef50_A4XL78 Ribosomal RNA large subunit methyltransferase N ... 229 2e-58 UniRef50_A4ECT0 Putative uncharacterized protein n=3 Tax=Collins... 228 2e-58 UniRef50_UPI00016C54F2 hypothetical protein GobsU_25056 n=1 Tax=... 228 3e-58 UniRef50_C7RGU3 Radical SAM enzyme, Cfr family n=5 Tax=Anaerococ... 228 3e-58 UniRef50_B2A2K6 Ribosomal RNA large subunit methyltransferase N ... 227 6e-58 UniRef50_C8WPW3 Radical SAM enzyme, Cfr family n=3 Tax=Coriobact... 226 9e-58 UniRef50_B2A0B9 Ribosomal RNA large subunit methyltransferase N ... 226 1e-57 UniRef50_A4SEQ5 Ribosomal RNA large subunit methyltransferase N ... 224 3e-57 UniRef50_B8HRU7 Radical SAM enzyme, Cfr family n=2 Tax=Chroococc... 224 3e-57 UniRef50_C1F813 Radical SAM enzyme, Cfr family n=1 Tax=Acidobact... 224 6e-57 UniRef50_Q5LY98 Ribosomal RNA large subunit methyltransferase N ... 223 9e-57 UniRef50_A8SLZ1 Putative uncharacterized protein n=1 Tax=Parvimo... 223 1e-56 UniRef50_C9LG49 Radical SAM enzyme, Cfr family n=16 Tax=Bacteria... 223 1e-56 UniRef50_A0LV48 Ribosomal RNA large subunit methyltransferase N ... 222 2e-56 UniRef50_B8FS78 Ribosomal RNA large subunit methyltransferase N ... 222 2e-56 UniRef50_A9A3L9 Ribosomal RNA large subunit methyltransferase N ... 222 2e-56 UniRef50_A9FFJ6 Ribosomal RNA large subunit methyltransferase N ... 221 4e-56 UniRef50_A5UT23 Ribosomal RNA large subunit methyltransferase N ... 221 4e-56 UniRef50_A8DJI2 Radical SAM enzyme Cfr family protein n=1 Tax=Ca... 221 5e-56 UniRef50_Q2JMN2 Ribosomal RNA large subunit methyltransferase N ... 221 5e-56 UniRef50_UPI0001C31CDE radical SAM enzyme, Cfr family n=1 Tax=Co... 219 1e-55 UniRef50_B9HMI5 Predicted protein n=1 Tax=Populus trichocarpa Re... 218 2e-55 UniRef50_C9LLK4 Radical SAM enzyme, Cfr family n=1 Tax=Dialister... 218 4e-55 UniRef50_C0QZJ2 Predicted Fe-S-cluster redox enzyme n=2 Tax=Brac... 217 5e-55 UniRef50_C1SKY4 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=De... 216 9e-55 UniRef50_UPI000050FC81 radical SAM enzyme, Cfr family protein n=... 213 8e-54 UniRef50_C7NGZ4 Radical SAM enzyme, Cfr family n=1 Tax=Kytococcu... 212 2e-53 UniRef50_C7M235 Radical SAM enzyme, Cfr family n=1 Tax=Acidimicr... 212 2e-53 UniRef50_B0S143 Ribosomal RNA large subunit methyltransferase N ... 212 2e-53 UniRef50_Q7V010 Ribosomal RNA large subunit methyltransferase N ... 211 4e-53 UniRef50_D1R7C7 Putative uncharacterized protein n=1 Tax=Parachl... 210 8e-53 UniRef50_B2J6D0 Ribosomal RNA large subunit methyltransferase N ... 209 1e-52 UniRef50_C9RKM0 Radical SAM enzyme, Cfr family n=1 Tax=Fibrobact... 209 1e-52 UniRef50_C1E6J0 Predicted protein n=2 Tax=Micromonas RepID=C1E6J... 209 2e-52 UniRef50_B7FZP4 Predicted protein (Fragment) n=2 Tax=Bacillariop... 208 2e-52 UniRef50_Q1AYW0 Ribosomal RNA large subunit methyltransferase N ... 207 8e-52 UniRef50_B1ZVM5 Ribosomal RNA large subunit methyltransferase N ... 206 1e-51 UniRef50_D1N5Y0 Radical SAM enzyme, Cfr family n=1 Tax=Victivall... 204 3e-51 UniRef50_B1ZQZ5 Ribosomal RNA large subunit methyltransferase N ... 204 5e-51 UniRef50_A9V4C5 Predicted protein n=2 Tax=Fungi/Metazoa group Re... 204 5e-51 UniRef50_B3DX07 Radical SAM family enzyme n=1 Tax=Methylacidiphi... 203 7e-51 UniRef50_D2VS80 Predicted protein n=1 Tax=Naegleria gruberi RepI... 202 1e-50 UniRef50_A4RXU8 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 202 2e-50 UniRef50_A6DL87 Putative uncharacterized protein n=1 Tax=Lentisp... 202 2e-50 UniRef50_UPI0001698B51 radical SAM enzyme, Cfr family protein n=... 201 3e-50 UniRef50_A9FD89 Probable RNA methyltransferase sce1580 n=1 Tax=S... 201 5e-50 UniRef50_C1EEM6 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 201 5e-50 UniRef50_B9CLR1 Radical SAM enzyme, Cfr family n=1 Tax=Atopobium... 200 8e-50 UniRef50_C8W8J4 Radical SAM enzyme, Cfr family n=3 Tax=Coriobact... 199 2e-49 UniRef50_A4S5T8 Predicted protein n=7 Tax=Viridiplantae RepID=A4... 199 2e-49 UniRef50_Q6MED6 Ribosomal RNA large subunit methyltransferase N ... 198 2e-49 UniRef50_B9EX01 Putative uncharacterized protein n=1 Tax=Oryza s... 195 2e-48 UniRef50_Q9LJN3 Gb|AAF41683.1 n=13 Tax=Magnoliophyta RepID=Q9LJN... 192 1e-47 UniRef50_C8PSX7 Radical SAM enzyme, Cfr family n=1 Tax=Treponema... 192 1e-47 UniRef50_A6DSV2 YloN n=1 Tax=Lentisphaera araneosa HTCC2155 RepI... 191 3e-47 UniRef50_B2S216 Ribosomal RNA large subunit methyltransferase N ... 191 4e-47 UniRef50_C0QD94 Putative uncharacterized protein n=1 Tax=Desulfo... 186 8e-46 UniRef50_A8I3K8 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 186 2e-45 UniRef50_D1VSE2 Radical SAM enzyme, Cfr family n=1 Tax=Peptoniph... 185 2e-45 UniRef50_B0SGA8 Ribosomal RNA large subunit methyltransferase N ... 184 7e-45 UniRef50_B8CKQ7 Putative uncharacterized protein n=1 Tax=Shewane... 181 4e-44 UniRef50_B5JDK5 Radical SAM enzyme, Cfr family n=1 Tax=Verrucomi... 181 4e-44 UniRef50_C1EAY2 Predicted protein n=3 Tax=Eukaryota RepID=C1EAY2... 181 4e-44 UniRef50_B1C5S5 Putative uncharacterized protein n=1 Tax=Anaerof... 180 9e-44 UniRef50_B7FTW5 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 179 1e-43 UniRef50_A8I8N2 Predicted Fe-S-cluster redox enzyme n=1 Tax=Chla... 178 3e-43 UniRef50_B2KDX7 Radical SAM enzyme, Cfr family n=1 Tax=Elusimicr... 176 9e-43 UniRef50_B0MQA1 Putative uncharacterized protein n=1 Tax=Eubacte... 175 3e-42 UniRef50_B7S3M1 Predicted protein n=2 Tax=Phaeodactylum tricornu... 175 3e-42 UniRef50_A4RV36 Predicted protein (Fragment) n=3 Tax=Viridiplant... 174 4e-42 UniRef50_B4U5N7 Radical SAM enzyme, Cfr family n=1 Tax=Hydrogeno... 171 3e-41 UniRef50_A7GH77 Ribosomal RNA large subunit methyltransferase cf... 170 7e-41 UniRef50_Q01GU0 Radical SAM domain-containing protein-like (ISS)... 169 2e-40 UniRef50_B8ZNC2 Radical SAM superfamily protein n=7 Tax=Streptoc... 167 7e-40 UniRef50_Q136A2 Probable RNA methyltransferase RPD_2859 n=1 Tax=... 166 1e-39 UniRef50_Q7UPG1 Probable RNA methyltransferase RB6963 n=2 Tax=Pl... 165 3e-39 UniRef50_Q5WJ42 Ribosomal RNA large subunit methyltransferase cf... 164 4e-39 UniRef50_B6AEB0 Radical SAM domain-containing protein n=1 Tax=Cr... 163 8e-39 UniRef50_C1ZMH3 23S rRNA m(2)A-2503 methyltransferase n=3 Tax=Pl... 163 9e-39 UniRef50_C1E2Q2 Predicted protein (Fragment) n=1 Tax=Micromonas ... 161 5e-38 UniRef50_Q2IHD1 Probable RNA methyltransferase Adeh_4229 n=4 Tax... 158 3e-37 UniRef50_Q1CYE1 Probable RNA methyltransferase MXAN_6459 n=2 Tax... 157 6e-37 UniRef50_C7GI13 Radical SAM enzyme, Cfr family n=15 Tax=Clostrid... 156 1e-36 UniRef50_Q2Z000 Putative uncharacterized protein n=1 Tax=uncultu... 156 2e-36 UniRef50_B5Y3J7 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 155 2e-36 UniRef50_B6KPF5 Radical SAM domain-containing protein n=4 Tax=To... 154 7e-36 UniRef50_Q8IM25 Radical SAM protein, putative n=5 Tax=Aconoidasi... 153 1e-35 UniRef50_C7GZA9 Radical SAM enzyme, Cfr family n=1 Tax=Eubacteri... 152 1e-35 UniRef50_Q01C13 Homology to unknown gene n=1 Tax=Ostreococcus ta... 150 5e-35 UniRef50_A8J882 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 144 4e-33 UniRef50_A9EPV3 Probable RNA methyltransferase sce3898 n=1 Tax=S... 139 3e-31 UniRef50_B8LDJ4 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 137 7e-31 UniRef50_Q5CQD5 Conserved protein with transmembrane region at C... 137 9e-31 UniRef50_Q3SHI2 Probable RNA methyltransferase Tbd_1951 n=22 Tax... 131 4e-29 UniRef50_B3LAU1 Radical SAM protein, putative n=4 Tax=Plasmodium... 127 5e-28 UniRef50_UPI000190F78A hypothetical protein Salmonentericaenteri... 127 5e-28 UniRef50_C6P0S6 Radical SAM domain protein n=1 Tax=Sideroxydans ... 125 3e-27 UniRef50_B6KND1 GPI transamidase 8, putative n=3 Tax=Toxoplasma ... 124 8e-27 UniRef50_C5KHT4 Putative uncharacterized protein n=1 Tax=Perkins... 120 6e-26 UniRef50_Q4HQT8 Radical SAM enzyme, Cfr family n=1 Tax=Campyloba... 115 2e-24 UniRef50_UPI00006DCC08 hypothetical protein CdifQ_04003012 n=1 T... 115 2e-24 UniRef50_Q3EPJ3 Radical SAM family enzyme n=1 Tax=Bacillus thuri... 114 5e-24 UniRef50_D0MX90 Ribosomal RNA large subunit methyltransferase N,... 110 6e-23 UniRef50_C5K4P4 Putative uncharacterized protein n=2 Tax=Perkins... 110 1e-22 UniRef50_B8BRJ2 Predicted protein n=1 Tax=Thalassiosira pseudona... 110 1e-22 UniRef50_C0QTQ8 Radical SAM enzyme, Cfr family n=4 Tax=Aquifical... 109 1e-22 UniRef50_B1AIK2 Putative uncharacterized protein n=15 Tax=Ureapl... 105 2e-21 UniRef50_UPI0001698B52 radical SAM enzyme, Cfr family protein n=... 100 1e-19 UniRef50_C1DT21 Radical SAM enzyme, Cfr family n=3 Tax=Sulfurihy... 99 2e-19 UniRef50_UPI0001910DA9 hypothetical protein Salmonellaentericaen... 94 6e-18 UniRef50_C6AJK7 Protein YfgB n=1 Tax=Aggregatibacter aphrophilus... 89 2e-16 UniRef50_B9PC33 Predicted protein (Fragment) n=1 Tax=Populus tri... 85 4e-15 UniRef50_A6GDS6 Putative uncharacterized protein n=1 Tax=Plesioc... 81 5e-14 UniRef50_C1SGI6 Predicted Fe-S-cluster redox enzyme n=1 Tax=Deni... 80 1e-13 UniRef50_Q5UP06 Uncharacterized protein R756 n=1 Tax=Acanthamoeb... 72 5e-11 UniRef50_A7AF87 Putative uncharacterized protein n=1 Tax=Parabac... 61 8e-08 UniRef50_D0MX91 Putative uncharacterized protein n=1 Tax=Phytoph... 60 9e-08 UniRef50_C7RH90 Fe-S-cluster redox enzyme-like protein n=1 Tax=A... 60 1e-07 UniRef50_C0B8Y0 Putative uncharacterized protein n=1 Tax=Coproco... 50 1e-04 UniRef50_C5K6S8 Putative uncharacterized protein n=1 Tax=Perkins... 49 2e-04 UniRef50_UPI00016C3CF8 hypothetical protein GobsU_10628 n=1 Tax=... 49 3e-04 UniRef50_B3FJU2 Putative uncharacterized protein n=1 Tax=Pseudom... 46 0.003 UniRef50_A7HKB3 Radical SAM domain protein n=12 Tax=cellular org... 45 0.006 UniRef50_P0A9N6 Pyruvate formate-lyase 1-activating enzyme n=287... 41 0.096 >UniRef50_Q8D1Y5 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Enterobacteriaceae RepID=RLMN_WIGBR Length = 382 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 198/354 (55%), Positives = 270/354 (76%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + KIN+L R+++ +FF +GE+ FRA+Q+MKW+Y CD+ MTD +K L+ KLK + Sbjct: 23 NKKINILGKTREELYDFFIKIGEEKFRAEQIMKWIYKRYCDDVSLMTDFSKNLKNKLKNI 82 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 +I ++ E S DGTIKW + + DQ +ETVYIPE +RATLC+SSQ+GCAL CKFC+T Sbjct: 83 IKIDHLDIESENISQDGTIKWVLKINDQNIETVYIPEINRATLCISSQIGCALNCKFCAT 142 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + QGFNRNL EII Q+W A KI+ + ITN+VMMGMGEPLLNL N+VPA++I Sbjct: 143 SYQGFNRNLNSYEIISQIWYAMKIINDRNNFKLKKITNIVMMGMGEPLLNLKNLVPAIKI 202 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 +LD++GFGLSKRR+T+ST+G+ P + KLG +IDV LAISLHAPND IR++I+PINKKYNI Sbjct: 203 ILDNYGFGLSKRRITISTAGISPVIKKLGKLIDVKLAISLHAPNDIIRNKIMPINKKYNI 262 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 ++ L + ++Y+ S AN+G+++IEY+ML+ +ND TEHA+QL LK+ PCKINLIPWNPF Sbjct: 263 KSILLSAKKYISTSKANKGKISIEYIMLNEINDKTEHAYQLINCLKNIPCKINLIPWNPF 322 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 P Y S+ ++I+ F K+L+ +G TT +RK RG DI AACGQL+G+VI+R + Sbjct: 323 PYVKYKCSNFNKINNFYKILIKHGITTTIRKQRGIDIKAACGQLSGNVINRINK 376 >UniRef50_Q6FEM6 Ribosomal RNA large subunit methyltransferase N n=449 Tax=Proteobacteria RepID=RLMN_ACIAD Length = 414 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 216/365 (59%), Positives = 265/365 (72%), Gaps = 15/365 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K+NLL ++R ++ +FF+ +GEK FRA Q+MKW++ Y + EMT+I+ LR KL++V E Sbjct: 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD---QRVETVYIPEDD----RATLCVSSQVGCALEC 129 I+APEVV S DGT KW VG+ VETV IP +D R TLC+SSQVGCAL+C Sbjct: 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKI----VGAAKVTGQRPITNVVMMGMGEPLLNL 185 FCST +QGF R+L +EIIGQ+W A + V A+ T R +TNVVMMGMGEPLLN Sbjct: 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERT--RAVTNVVMMGMGEPLLNF 210 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEI 245 VV +M IMLDD+ +G+SKRRVTLSTSGVVP +DKL + +DVALAISLHAPN+ +RDE+ Sbjct: 211 KPVVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDEL 270 Query: 246 VPINKKYNIETFLAAVRRYLEKSNANQGR--VTIEYVMLDHVNDGTEHAHQLAELLKDTP 303 VPINKKY +E +AA +RY+ K R VTIEYVMLD VND EHA QL +LLK+ P Sbjct: 271 VPINKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLP 330 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 KINLIP+NPFP APYGRSS +RI F K L GF +R+TRGDDIDAACGQL G V Sbjct: 331 SKINLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVA 390 Query: 364 DRTKR 368 DRT+R Sbjct: 391 DRTRR 395 >UniRef50_B7H072 Ribosomal RNA large subunit methyltransferase N n=68 Tax=Proteobacteria RepID=RLMN_ACIB3 Length = 410 Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust. Identities = 214/364 (58%), Positives = 264/364 (72%), Gaps = 11/364 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K+NLL ++R ++ +FF+D+GEK FRA QVMKW++ Y +F EMT+I+ LR KL+++ E Sbjct: 29 KVNLLGMSRAELEKFFEDIGEKKFRAGQVMKWIHQYFVTDFAEMTNISGKLRAKLEQICE 88 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD---QRVETVYIPEDD----RATLCVSSQVGCALEC 129 I+APEVV S DGT KW VG+ VETV IP +D R TLC+SSQVGCAL+C Sbjct: 89 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 148 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRA--AKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 FCST +QGF R+L EIIGQ+W A + + +R +TNVVMMGMGEPLLN + Sbjct: 149 SFCSTGKQGFQRDLTPDEIIGQLWMANYSYMEEVPVAERERSVTNVVMMGMGEPLLNYDA 208 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVP 247 V+ +M IMLDDF +G+SKRRVTLSTSGVVP +D+L IDVALAISLHAPNDE+R+E+VP Sbjct: 209 VLSSMHIMLDDFAYGMSKRRVTLSTSGVVPKIDQLAKDIDVALAISLHAPNDELRNELVP 268 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGR--VTIEYVMLDHVNDGTEHAHQLAELLKDTPCK 305 INKKY + +AA +RY+ K R VTIEYVML+ VND EHA QL +LLK+ P K Sbjct: 269 INKKYPLAQLIAACQRYIAKDGNESARKHVTIEYVMLEGVNDQPEHAQQLLKLLKNLPSK 328 Query: 306 INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 INLIP+NPFP APYGRSS +RI F K L GF +R+TRGDDIDAACGQL G V DR Sbjct: 329 INLIPFNPFPHAPYGRSSRNRIISFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 388 Query: 366 TKRT 369 T+R Sbjct: 389 TRRA 392 >UniRef50_B2U9U6 Ribosomal RNA large subunit methyltransferase N n=47 Tax=Bacteria RepID=RLMN_RALPJ Length = 383 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 204/373 (54%), Positives = 258/373 (69%), Gaps = 11/373 (2%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 +NLLD + Q + + + LGEK FRA Q+ +W++ F EMTD+ K LR KL A I Sbjct: 5 VNLLDFDAQGLLAYCESLGEKSFRAKQLQRWIHQSGASEFGEMTDLAKSLREKLATRANI 64 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 +AP V+ + SSDGT KW + VG VETVYIPE+ R TLCVSSQ GCA+ C+FCST + Sbjct: 65 QAPAVISDHLSSDGTRKWLVDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGK 124 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP-----ITNVVMMGMGEPLLNLNNVVPA 191 QGF+RNL EIIGQ+W A K G+ P ITNVVMMGMGEPLLN + VVPA Sbjct: 125 QGFSRNLSTGEIIGQLWMAE--FAMRKQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPA 182 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 + +MLDD +GLS+RRVT+STSGVVP +D+L + VALA+SLHA ND +RD +VP+NKK Sbjct: 183 LALMLDDNAYGLSRRRVTVSTSGVVPMMDRLARDVPVALAVSLHASNDALRDVLVPLNKK 242 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + +AA RRYLE A + +T EY MLD VND EHA +L ++ D PCK NLIP+ Sbjct: 243 YPLAELMAACRRYLE--FAPRDFITFEYCMLDGVNDTVEHARELLRVVADVPCKFNLIPF 300 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 NPFP + RS+N +I RFS+VL+ G T +RKTRGDDIDAACGQLAG+V DRT+ R Sbjct: 301 NPFPESGLKRSNNEQIRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKDRTRLAER 360 Query: 372 KRMQGEAIDIKAV 384 + G+ ++I V Sbjct: 361 GKF-GKIVEIPVV 372 >UniRef50_Q5P7B0 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Aromatoleum aromaticum EbN1 RepID=RLMN_AZOSE Length = 408 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/405 (50%), Positives = 262/405 (64%), Gaps = 48/405 (11%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 +NLLD + + +F + GEKPFRA QVM+WM+ + +F MTD+ K LR KL E A I Sbjct: 5 VNLLDFDVDGLVTWFAERGEKPFRARQVMRWMHRFGETDFGNMTDVAKSLRAKLAEEACI 64 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 RAP + + S DGT KW + VG VE V+IPE +R TLC+SSQ GCAL+C FCST + Sbjct: 65 RAPRAIRDAVSVDGTRKWLLDVGSANAVEAVFIPETNRGTLCISSQAGCALDCAFCSTGK 124 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVG---------------------------AAKVTG--- 166 QGFNRNL +EIIGQ+W A +++G AA G Sbjct: 125 QGFNRNLSAAEIIGQLWLANRLLGGSASPAGSKDGDGGPDHASRATKLDHRAADAKGVQS 184 Query: 167 -------------QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTS 213 R I+NVVMMGMGEPL N +NVV A+ +MLDD +GLS+RRVT+STS Sbjct: 185 DSWRSSDPEEDHNGRVISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGLSRRRVTVSTS 244 Query: 214 GVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG 273 G+VPA+D+L D VALA+SLHAP+D +RD +VPIN+KY + +AA +RYLE+ A + Sbjct: 245 GIVPAMDRLRDECPVALAVSLHAPDDALRDRLVPINRKYPLRELMAACQRYLER--APRD 302 Query: 274 RVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKV 333 VT EYVMLD VND HA L EL++D PCK NLIP+NPFP + + RS RI RF+ + Sbjct: 303 FVTFEYVMLDDVNDSDAHARALVELVRDVPCKFNLIPFNPFPNSGFDRSPAERIRRFAAI 362 Query: 334 LMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR--KRMQG 376 L+ G T RKTRGDD++AACGQLAG V DR++RT+R K M+G Sbjct: 363 LIDAGIVTTTRKTRGDDVNAACGQLAGQVQDRSRRTVRLVKPMEG 407 >UniRef50_Q3BTW5 Ribosomal RNA large subunit methyltransferase N n=18 Tax=Gammaproteobacteria RepID=RLMN_XANC5 Length = 401 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 200/376 (53%), Positives = 258/376 (68%), Gaps = 16/376 (4%) Query: 17 KINLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K NLLDL+R+ + FF D LGE +RA QVMKW++H +FD+MTD+ K LR KL + A Sbjct: 22 KQNLLDLDREGLERFFADTLGEARYRAHQVMKWIHHRYVTDFDQMTDLCKALRAKLHQHA 81 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVG---DQRVETVYIPEDDRATLCVSSQVGCALECKFC 132 E+ P VV ++ S+DGT KW +A+G +ETVYIP+ R TLCVSSQVGC L C FC Sbjct: 82 EVLVPNVVFDKPSADGTHKWLLAMGADGKNAIETVYIPDKGRGTLCVSSQVGCGLNCTFC 141 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 STA QGFNRNL +EIIGQVW AA+ +G QR +TNVVMMGMGEPL+N +NVV AM Sbjct: 142 STATQGFNRNLTTAEIIGQVWVAARHLGNVP-HQQRRLTNVVMMGMGEPLMNFDNVVRAM 200 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKY 252 +M DD G+GL+ +RVTLSTSG+VP +D+L DV+LA+SLHA ND +R+ +VP+NKKY Sbjct: 201 SVMRDDLGYGLASKRVTLSTSGLVPMIDRLSTESDVSLAVSLHAANDTLRESLVPLNKKY 260 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD--------TPC 304 I + + RYL S + VT EY ++ +ND EHA QLA L++ Sbjct: 261 PIAELMESCARYLRGSK-KRDSVTFEYTLMKGINDQPEHARQLARLMRQFDNAVQSKDAG 319 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 K+NLIP+NPFPG Y RS + I F K+L+ T+VR+TRGDDIDAACGQL G V+D Sbjct: 320 KVNLIPFNPFPGTRYERSGETEIRAFQKILLDAQVLTMVRRTRGDDIDAACGQLKGQVMD 379 Query: 365 RTKRT--LRKRMQGEA 378 RT+R R+ ++G+A Sbjct: 380 RTRRQAEFRRTLEGQA 395 >UniRef50_A4SYE2 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Proteobacteria RepID=RLMN_POLSQ Length = 402 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/367 (50%), Positives = 248/367 (67%), Gaps = 19/367 (5%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 ++NLLD + QM + L EKPFRA Q+M+W++ + ++M+D+ K R L + E Sbjct: 5 RVNLLDFDADQMAAYVAGLNEKPFRAKQLMQWIHQRGVSDINDMSDLAKSFRATLLDKVE 64 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + V++++ ++DGT KW + VG VE+V+IPEDDR TLC+SSQ GCA+ C+FCST Sbjct: 65 VLSLPVIKDEHATDGTRKWLLDVGAGNAVESVFIPEDDRGTLCISSQAGCAVNCRFCSTG 124 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIV---------------GAAKVTGQRPITNVVMMGMGE 180 +QGF+RNL EIIGQ+W A ++ + TG R I+NVVMMGMGE Sbjct: 125 RQGFSRNLTSGEIIGQLWFAEHLLRNDPEAIRRIEKYPTPGWEHTG-RVISNVVMMGMGE 183 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDE 240 PLLN +NVV A+ +MLDD +GLS+RRVT+STSGVVP +D+L VALA+SLHAPND Sbjct: 184 PLLNYDNVVSALRLMLDDRAYGLSRRRVTVSTSGVVPMIDRLAQDCPVALAVSLHAPNDA 243 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 +RD++VP+N+KY + L A RYL A + +T EY MLD VND A +L LL+ Sbjct: 244 LRDQLVPLNQKYPLRELLDACERYL--PFAPRDFLTFEYCMLDGVNDSDIQAKELVRLLR 301 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 + CKINLIP+NPFP + RSS R++ F+ +L+ G VRKTRGDDI AACGQLAG Sbjct: 302 NIKCKINLIPFNPFPESGLKRSSAQRVNAFAGILLDAGMVATVRKTRGDDIAAACGQLAG 361 Query: 361 DVIDRTK 367 DV+DRT+ Sbjct: 362 DVVDRTR 368 >UniRef50_A5CX33 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=RLMN_VESOH Length = 356 Score = 359 bits (921), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 173/354 (48%), Positives = 244/354 (68%), Gaps = 6/354 (1%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K NLL LN+ + +FF LGEK +R Q+M+W+Y +FD+M + +K LR +L ++A Sbjct: 2 NKQNLLSLNQDALNDFFVCLGEKHYRTKQIMQWIYKVHEFDFDKMFNFSKSLREELNKIA 61 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P+VV+++ + D IKW +A+ D +E VYIPE DR TLC+SSQVGCAL C FCST Sbjct: 62 CIEFPKVVKQKFALDKVIKWVLALSEDNYIEMVYIPEKDRGTLCISSQVGCALACTFCST 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 QGFN+NL +EII QV A K + + + I+N+V MGMGEPLLN V A ++ Sbjct: 122 GMQGFNKNLTTAEIIAQVLIANKYLNSK----TKRISNIVFMGMGEPLLNEQAVYNACDL 177 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 +LDD FGLS+R+VT+STSG+VP++ ++ V+LAISLHAPN+++RD++VP+N+KY+I Sbjct: 178 LLDDLAFGLSRRKVTISTSGIVPSILRMSKRTPVSLAISLHAPNNQLRDKLVPVNQKYSI 237 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L A + YL + + + EYVML VND TEHA++LA+LLK K+NLIP+N F Sbjct: 238 EELLKACKVYLN-AGTQERHILFEYVMLKDVNDSTEHANKLAKLLKAISAKVNLIPFNSF 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 Y S+ I++F +L G T++R+TRG+DID ACGQLAG V+++TK+ Sbjct: 297 ERTQYQSSNAQTIEKFQDILYQQGIRTMMRRTRGEDIDGACGQLAGKVLNKTKK 350 >UniRef50_B5EJF0 Radical SAM enzyme, Cfr family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJF0_ACIF5 Length = 363 Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 164/345 (47%), Positives = 223/345 (64%), Gaps = 10/345 (2%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 +LL L RQ + + + GE PFRA+Q+++W++ +F MTDI+K LR +L I Sbjct: 15 HLLGLGRQSLAKLLRTWGESPFRANQILQWLHTRQVTDFAAMTDISKTLRARLAAETRID 74 Query: 79 APEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 PE++ +Q ++D T KW + + D +ETV+IP +DR TLC+SSQVGC+L C FC+T Q Sbjct: 75 MPEIIADQTAADCTRKWLLRLPDGNAIETVFIPGEDRGTLCISSQVGCSLACSFCATGAQ 134 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G +RNL EII QV A +G ITN+V MGMGEP+LNL V+PA++++ D Sbjct: 135 GLSRNLETHEIIAQVRVARDFLGLDA------ITNIVFMGMGEPMLNLREVLPALDLLRD 188 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 D+ +G RR+T+ST+GVVP +D+LG V LAISLHA DEIRD +VP+N+ Y + Sbjct: 189 DYAYGFGARRITVSTAGVVPGMDRLGAESPVNLAISLHASRDEIRDILVPVNRHYPLAEL 248 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGA 317 LAA + R+T EYVML+ VND HA +L LL+D P +NLIP+NPFPG+ Sbjct: 249 LAAC---RRYPLPPRRRITFEYVMLEGVNDADSHARELLRLLRDIPAMVNLIPFNPFPGS 305 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 Y RS RID F +++ T+ R+ RGDDI AACGQLAG V Sbjct: 306 DYKRSPQVRIDAFRDIILRGNVMTVTRRPRGDDIAAACGQLAGQV 350 >UniRef50_B6BF31 Radical SAM enzyme, Cfr family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF31_9RHOB Length = 413 Score = 334 bits (856), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 177/363 (48%), Positives = 234/363 (64%), Gaps = 14/363 (3%) Query: 16 GKINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 GKINL+ L R +MRE + G + R Q+ +W+Y + +F EMT++ K R +L Sbjct: 22 GKINLVGLTRDRMREVLMEHGTPEKQAKMRVGQIWQWIYQWGKRDFAEMTNLAKAYRAQL 81 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECK 130 E EIR PEVV +Q S+DGT K+ + + G VE VYIPE+DR TLC+SSQVGC L C Sbjct: 82 AETFEIRIPEVVSKQVSTDGTRKYLVRIAGGHEVEVVYIPEEDRGTLCISSQVGCTLTCS 141 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG-----QRPITNVVMMGMGEPLLNL 185 FC T Q RNL +EI+GQV A + V G R ++N+V+MGMGEPL N Sbjct: 142 FCHTGTQKLVRNLTPAEIVGQVMMARDDLEEWPVPGAPKEETRLLSNIVLMGMGEPLYNF 201 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEI 245 +NV AM+I +D G LS+RR+TLSTSGVVP + + I LAIS HA +E RD + Sbjct: 202 DNVRDAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAQEIGCLLAISFHATTNETRDVL 261 Query: 246 VPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--DTP 303 VPINK++NI+ L A+ Y + SN+ R+T EYVMLD VND E AH+L + +K + P Sbjct: 262 VPINKRWNIDELLQALADYPKASNSE--RITFEYVMLDGVNDTDEDAHRLIDHIKRYNIP 319 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 KINLIP+N +PG+PY RSSN+RI F+ ++ G+ + +RKTRGDDI AACG +V Sbjct: 320 AKINLIPFNEWPGSPYKRSSNNRIRAFANIIYQAGYASPIRKTRGDDIMAACGLRPAEVS 379 Query: 364 DRT 366 DRT Sbjct: 380 DRT 382 >UniRef50_Q2N9J2 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Alphaproteobacteria RepID=RLMN_ERYLH Length = 418 Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 178/375 (47%), Positives = 230/375 (61%), Gaps = 26/375 (6%) Query: 8 PENVTTK-DGKINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNFDEMTD 62 P ++T + DG+++L+ L + +++E F + G + R+ QV W+YH +F+ MTD Sbjct: 19 PRDITPRADGRVDLMGLPKARIQELFAEAGLDAKQAKLRSKQVYHWLYHRGVTDFEAMTD 78 Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSS 121 I K +R L E + P VVE Q S+DGT KW + D E V+IP+ DR TLCVSS Sbjct: 79 IAKTMRPWLAERFIVGRPNVVEAQHSTDGTRKWLLQTDDGHDFEMVFIPDADRGTLCVSS 138 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQV---------WRAAKIVGAAKV--TGQ--- 167 QVGC L C+FC T RNL EI+GQV W ++ G V TG Sbjct: 139 QVGCTLNCRFCHTGTMRLVRNLTPGEIVGQVMLARDALGEWPKGRMDGLDDVEDTGHYSA 198 Query: 168 --RPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM 225 R +TN+VMMGMGEPL N +NV A+++++D G LSKRR+TLSTSGVVP +++ G+ Sbjct: 199 DGRLLTNIVMMGMGEPLYNFDNVRDALKLVMDGEGLALSKRRITLSTSGVVPMMERCGEE 258 Query: 226 IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHV 285 I V LA+SLHA +IRDEIVPINKKY IE L A Y SNA R+T EYVML Sbjct: 259 IGVNLAVSLHAVTKDIRDEIVPINKKYGIEELLQACADYPGASNAR--RITFEYVMLKDK 316 Query: 286 NDGTEHAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIV 343 ND EHA +L LLK + P K+NLIP+NP+PGA Y S+ RI FS ++ G + V Sbjct: 317 NDTDEHARELVRLLKQYNLPAKVNLIPFNPWPGAAYECSTPERIRAFSNIVFEGGISAPV 376 Query: 344 RKTRGDDIDAACGQL 358 R RG DIDAACGQL Sbjct: 377 RTPRGRDIDAACGQL 391 >UniRef50_Q2W897 Ribosomal RNA large subunit methyltransferase N n=60 Tax=Alphaproteobacteria RepID=RLMN_MAGSA Length = 456 Score = 306 bits (785), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 161/349 (46%), Positives = 212/349 (60%), Gaps = 7/349 (2%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 D K NL+ L+R Q+ +GEKPFRA Q+ WMY+ +F +MT I+K + G L E Sbjct: 84 DSKTNLIGLSRDQLIAEMASIGEKPFRAKQLWHWMYNRGETDFAKMTSISKSMHGALAER 143 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDD--RATLCVSSQVGCALECKF 131 +R P V +E S+D T KW + D ETVYIP+ D R +C+S+QVGC L C+F Sbjct: 144 YVVRRPGVTKELISADTTRKWLLKFDDGHEAETVYIPDADEERGAVCISTQVGCTLTCRF 203 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT--GQRPITNVVMMGMGEPLLNLNNVV 189 C T Q RNL +EI+GQ A G G R ++N+V+MGMGEPL N NV Sbjct: 204 CHTGTQLLVRNLSAAEIVGQFMVARDSYGEWPTPDDGGRQLSNIVVMGMGEPLYNFENVA 263 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPIN 249 A+EI +D G G+SKRR+TLSTSGVVP + + G+ + V LA+SLHA DEIRD I+PIN Sbjct: 264 TALEIAMDGEGIGISKRRITLSTSGVVPMMKECGERLGVNLAVSLHAVTDEIRDRIMPIN 323 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 KKY ++ + A R Y SNA R+T EY+ML +ND A L +L+K P K NLI Sbjct: 324 KKYPLKELMQACREYPGASNAR--RITFEYIMLKGINDSAADARALLKLVKGLPAKFNLI 381 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P+NP+PG+ + FS +L G++ +R RG DI AACGQL Sbjct: 382 PFNPWPGSEFDTPDIKTTKAFSDILQDAGYSAPIRMPRGRDILAACGQL 430 >UniRef50_B0UQR1 Ribosomal RNA large subunit methyltransferase N n=102 Tax=Bacteria RepID=RLMN_METS4 Length = 431 Score = 303 bits (776), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 170/377 (45%), Positives = 224/377 (59%), Gaps = 27/377 (7%) Query: 6 VTPENVTTKDGKINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNFDEMT 61 V PE + G+ +L+ L R +RE +G E+ R Q+ W+ +F+ MT Sbjct: 27 VRPEAMVAT-GRPSLVGLTRGALRERLAAIGVPEREQRMRTGQLWHWINVRGAASFEAMT 85 Query: 62 DINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVG---------DQRVETVYIPED 112 ++ K L+ +L+E + PEVV EQ S DGT KW + + +E VYIP + Sbjct: 86 NVGKGLKAQLEEAYTLDRPEVVSEQVSRDGTRKWLLRMPPTGRHDHNRGAEIECVYIPAN 145 Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG-----------A 161 DR TLCVSSQVGC L C FC T Q RNL EI Q+ A +G Sbjct: 146 DRGTLCVSSQVGCTLTCSFCHTGTQRLVRNLSAQEITAQLVVARDRLGDWPGQVPPKGTF 205 Query: 162 AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDK 221 V G R ++N+V MGMGEPL N++NVV A+ +M D+ G GLS+RR+T+STSGVVP ++ Sbjct: 206 VPVDGSRFVSNIVFMGMGEPLYNVDNVVDAVGVMSDNEGLGLSRRRITVSTSGVVPQFER 265 Query: 222 LGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVM 281 LG + LAISLHA D++RDE+VP+N+KY I T L A R Y SNA R+T EYVM Sbjct: 266 LGIDANAMLAISLHAVRDDLRDELVPLNRKYPIRTLLEACRNYPGVSNAR--RITFEYVM 323 Query: 282 LDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTT 341 L VND A +L LLK P KINLIP+NP+PG+ Y S RI+RFS+++ + G+ + Sbjct: 324 LKGVNDSDSEARELVRLLKGIPAKINLIPFNPWPGSRYECSDWERIERFSEIVFNAGYAS 383 Query: 342 IVRKTRGDDIDAACGQL 358 VR RG DI AACGQL Sbjct: 384 PVRTPRGRDILAACGQL 400 >UniRef50_Q3SNT2 Ribosomal RNA large subunit methyltransferase N n=21 Tax=cellular organisms RepID=RLMN_NITWN Length = 397 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 170/361 (47%), Positives = 223/361 (61%), Gaps = 17/361 (4%) Query: 16 GKINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 K +L+ L+R +M E +G ++ R Q+ WMY F EMT ++K +R +L Sbjct: 20 AKPSLIGLSRAEMAERLAAIGIPREQRRMRVQQLWHWMYVRGARTFAEMTSVSKDMRAEL 79 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAV--GD-----QRVETVYIPEDDRATLCVSSQVG 124 ++ + PEVV EQ SSDGT KW + + GD VE VYIPE DR TLCVSSQVG Sbjct: 80 EKHVTLDRPEVVAEQISSDGTRKWLLRLPSGDDLEKPHEVECVYIPETDRGTLCVSSQVG 139 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG--AAKVT--GQRPITNVVMMGMGE 180 C L C FC T Q RNL EI+GQ+ A + A + T G R +TN+VMMGMGE Sbjct: 140 CTLNCSFCHTGTQRLVRNLTAGEIVGQIMVARDRLNDWADRETPHGNRLVTNIVMMGMGE 199 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDE 240 PL N + V + I+ D+ G G+SKRR+TLSTSGVVP + + G+ I V LAISLHA DE Sbjct: 200 PLYNFDAVRDGLLIVADNEGIGISKRRITLSTSGVVPNIVRAGEEIGVMLAISLHAVRDE 259 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 +RDE+VP+N+KY I + A R Y SNA R+T EYVML VND + A +L +LL Sbjct: 260 LRDELVPLNRKYPIAELMQACRDYPAASNAK--RITFEYVMLKGVNDSLDDARRLVKLLN 317 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 KINLIP+NP+PG Y S +I++FS+ + + G+++ VR RG DI AACGQL Sbjct: 318 GIHAKINLIPFNPWPGTRYECSDWDQIEKFSEYVFNAGYSSPVRTPRGRDILAACGQLKS 377 Query: 361 D 361 + Sbjct: 378 E 378 >UniRef50_Q2LUM5 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Syntrophus aciditrophicus SB RepID=RLMN_SYNAS Length = 348 Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 146/349 (41%), Positives = 217/349 (62%), Gaps = 9/349 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +IN+ D++ +++ F LG++ +RA Q+MKW+Y +FDEMT +++ +R +L E+A Sbjct: 5 RINIRDMSLEEIESFISSLGKEKYRARQIMKWLYSQGAKSFDEMTTLSRAVRDQLNEMAC 64 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I PE+ Q+SSDGT K + D +E+V IP T C+S+QVGC + C+FC TA Sbjct: 65 ITLPEIARVQQSSDGTRKILFRLQDNSFIESVLIPGKHNWTACISTQVGCHMGCRFCFTA 124 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 +QGF RNL+ SEI GQ+ + I N+VMMGMGEPL N N + A+ I+ Sbjct: 125 RQGFRRNLKPSEITGQLTMLQFYLPEGP-----EIKNIVMMGMGEPLANYRNTLKAIRII 179 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D+G G S R++TLSTSG+ P +++LG + + LAISL+AP D IR E++P+N+KY ++ Sbjct: 180 TSDYGLGFSTRKITLSTSGITPMIEQLGRDLCINLAISLNAPTDSIRSELMPVNRKYPLD 239 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 L A R Y + +T EY+++D VN HA L LLK CK+NLI +N FP Sbjct: 240 RLLQACRNY---PMPGRRMLTFEYILIDGVNSSPAHAEMLCRLLKGIRCKLNLIRFNEFP 296 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 P+ S + F ++L+ + +T I+R +RG DI AACGQL+G ++ Sbjct: 297 DCPFKTPSEETVLAFQQILVKHHYTAIIRASRGRDILAACGQLSGKALE 345 >UniRef50_Q6ALW1 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Desulfobulbaceae RepID=RLMN_DESPS Length = 362 Score = 293 bits (749), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 155/357 (43%), Positives = 215/357 (60%), Gaps = 7/357 (1%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 E +TT KI+L +L++ Q+ EF + LG+ FR Q+M W+Y +F++MTD+ KV R Sbjct: 3 EEITTNREKIDLKNLSQDQLVEFAEKLGQPAFRGRQIMSWLYRPEVRDFEQMTDLAKVFR 62 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCAL 127 L E + + +R+ DG +K+ + D V ETV IPE DR TLC+SSQVGCA+ Sbjct: 63 KLLAENSFFSHFDDPIIERAKDGCVKFGFRLHDGHVIETVLIPEPDRNTLCISSQVGCAM 122 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG---AAKVTGQRPITNVVMMGMGEPLLN 184 +C FC T GF RNL SEI+ QV A + A K+ G +TNVV MGMGEPL N Sbjct: 123 KCTFCMTGGMGFTRNLTPSEIVNQVCAARDFLANEPADKLIGPDRVTNVVYMGMGEPLNN 182 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDE 244 L NV+ ++ I+ + G L+ RR+T+ST G+V + +LG V LAISLHA +D+ RD Sbjct: 183 LENVLTSISILTEQKGLDLTGRRITVSTCGIVANMARLGQEAPVNLAISLHAVDDKTRDM 242 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P+N +Y ++ L A R Y + R+ EY+ML +ND A LA L++ PC Sbjct: 243 LMPVNNRYPLDELLEACRTY---PMGKRRRIMFEYIMLAGINDSDTEARTLARKLQEIPC 299 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 KINLIP+N PG PY RI F +L ++ +R +RG+DI AACGQLA D Sbjct: 300 KINLIPYNESPGLPYKSPGMKRILSFQNILREANYSVFIRNSRGEDIAAACGQLATD 356 >UniRef50_D0LIH5 Radical SAM enzyme, Cfr family n=2 Tax=Nannocystineae RepID=D0LIH5_HALO1 Length = 378 Score = 289 bits (740), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 217/349 (62%), Gaps = 9/349 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +I+L L+ + +LG+ +R +Q+ +W++ ++M ++ + LR L E Sbjct: 17 RIDLRTLDLAETVALALELGQPRYRGEQIWRWVHGAGVTRLEDMANLPRTLRELLAERTT 76 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + V Q S DGT K + D R +ETV IP+ D+ T C+SSQVGCAL+C FC+TA Sbjct: 77 LGTLRVDAAQTSRDGTRKLRLRTRDGRAIETVLIPDGDKLTQCISSQVGCALDCDFCATA 136 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G R+L EI+ QV+R ++ A+V +R ITN+V MGMGEPL N NVV ++ ++ Sbjct: 137 KLGLTRHLDPGEIVDQVYRGRALL--AEVEPERRITNLVYMGMGEPLHNYANVVKSLRLL 194 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 + G LS+RR+T+ST G VP ++KLG + + LAISL+A +DEIRD I+P+N+K+NI Sbjct: 195 TSELGANLSQRRITVSTVGQVPGIEKLGREDVRPNLAISLNASSDEIRDRIMPVNRKWNI 254 Query: 255 ETFLAAVRRY-LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 L AVR Y LE+ RVT EYV+L VND A +L+ LL+ PCK+N+IPWNP Sbjct: 255 ARLLQAVRDYPLERRR----RVTFEYVLLAGVNDSMADAARLSRLLRGIPCKLNIIPWNP 310 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 PGAPY R S ++ F G T +R RGDDIDAACGQLA V Sbjct: 311 HPGAPYQRPSAHAVEAFQNEAKRLGLPTYLRTPRGDDIDAACGQLAARV 359 >UniRef50_Q3A2Z4 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Deltaproteobacteria RepID=RLMN_PELCD Length = 371 Score = 286 bits (733), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 149/353 (42%), Positives = 222/353 (62%), Gaps = 18/353 (5%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 +D +I+L + +++ EF +G++ FRA QVM+WMYH D+FD M+D++KVLR +L + Sbjct: 7 QDTRIDLKNFTLEELTEFLAGMGKERFRAGQVMRWMYHRLVDDFDAMSDLSKVLRAELHQ 66 Query: 74 VAEIR--APEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDD-RATLCVSSQVGCALEC 129 A I PE E+ R DGT K+ + D + +E+V IP DD RATLC+S+QVGCA+ C Sbjct: 67 RARISRLTPEATEDSR--DGTRKYLFRLEDGETIESVRIPMDDNRATLCISTQVGCAMGC 124 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC T G RNL EI+ QV AA G P+ N+V+MGMGEPL NL+NVV Sbjct: 125 VFCHTGSFGLVRNLTPGEIVNQVC-------AALADG--PVNNIVLMGMGEPLHNLDNVV 175 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPIN 249 A++I+ G S R+VTLST+G+VP + +LG + V LA+SL+A DE+R+ ++P+N Sbjct: 176 KALQILYMPQGLDYSPRKVTLSTAGLVPQMQELGKRVRVNLAVSLNATTDEVRNRLMPVN 235 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 ++Y ++ +AA R+Y + + R+T EY+++ VND + A +L +LL K+N+I Sbjct: 236 QRYPLQQLMAACRQYPLHA---KKRITFEYILIRDVNDSDQDARRLVKLLHGIKAKVNII 292 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 P+N + + + RI RF L+ +G I R ++G DI AACGQL G + Sbjct: 293 PFNEHSASEFRAPTEERISRFQGYLLDHGMVAIRRASKGQDISAACGQLKGKL 345 >UniRef50_B8CWT1 Radical SAM enzyme, Cfr family n=2 Tax=Firmicutes RepID=B8CWT1_HALOH Length = 349 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 220/347 (63%), Gaps = 7/347 (2%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + K +L L+R+++ +F+ G FRA Q+ W+Y D F M ++ VLR +L+E Sbjct: 2 ETKEDLKSLSRKELLMWFEKRGYPSFRASQLFNWIYRNGVDEFSRMNNLPLVLREELEEK 61 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIP-EDDRATLCVSSQVGCALECKFC 132 + + ++V + ++ DGT+K+ + D + +E+V+IP E R ++C+SSQVGC+L CKFC Sbjct: 62 SYLTKLKIVNKSKAEDGTVKYLWELKDGETIESVFIPYEGSRNSVCISSQVGCSLGCKFC 121 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T G RNL EI+ QV + K + K R ++NVV MGMGEPL N+ +V+ A+ Sbjct: 122 ATGLTGLIRNLTPGEIVDQVLQIQKEISNDKYGSPR-VSNVVFMGMGEPLANMKSVLKAI 180 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 EIM D G + KR++T+STSG+VP + +L D + + LAISL+APN+ +RD+++PIN+K Sbjct: 181 EIMNDSKGLNIGKRKITVSTSGLVPQIKELADKKLQIVLAISLNAPNNALRDKLMPINRK 240 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + +E L AVR Y E +N RVT EYV+L ND EHA QL LL D +NLIP+ Sbjct: 241 FPLEKLLEAVRYYTEVTNR---RVTFEYVLLKGTNDSPEHAFQLVNLLSDIHGHVNLIPF 297 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 NP + R S ++RF +L++ G T VR+ RG I+AACGQL Sbjct: 298 NPVQETEFKRPSKETVNRFKDILINNGVETTVRQERGTRIEAACGQL 344 >UniRef50_A1VAL8 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Desulfovibrionaceae RepID=RLMN_DESVV Length = 364 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 154/358 (43%), Positives = 214/358 (59%), Gaps = 19/358 (5%) Query: 19 NLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++L+L +++ F +LGE FRA QV +W++ C +FDEMT+++K R +L E A I Sbjct: 3 DILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKAVI 62 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRA-----TLCVSSQVGCALECKF 131 PEV Q+S+DGT K+ + + D VETV IP R T C+S QVGCA+ C F Sbjct: 63 TWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCTF 122 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP----ITNVVMMGMGEPLLNLNN 187 CST GF RN+ + EI+GQV +V A + RP + N+V MGMGEPLLNLN Sbjct: 123 CSTGTMGFERNMTMGEILGQV-----LVARAHLGDSRPDHPILRNLVFMGMGEPLLNLNE 177 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVP 247 V+ ++ + D+FG S RR+T+ST G+ L +LG+ LA+SLHAPN EIR I+P Sbjct: 178 VMRSLRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEIRKRIMP 237 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 ++++ + A+ Y K+ RVT EY++L VNDG EHA +L L+ T K+N Sbjct: 238 KAAHWHLDDLITALESYPLKTRE---RVTFEYLLLGGVNDGIEHARELVRLVSRTKGKLN 294 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 LI +NP G PY + RI F + L S T I+RK++G DI AACGQL + R Sbjct: 295 LIVYNPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLKASELQR 352 >UniRef50_A8ZV25 Ribosomal RNA large subunit methyltransferase N n=9 Tax=Deltaproteobacteria RepID=RLMN_DESOH Length = 371 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 146/343 (42%), Positives = 219/343 (63%), Gaps = 10/343 (2%) Query: 22 DLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPE 81 +L R + ++ P+RADQV KW++ + ++FD+MT+I+K +R L E I + Sbjct: 30 NLTRARFADWLNAHNIAPYRADQVFKWLFVHRAESFDQMTNISKPVRTLLAESFIIGRLK 89 Query: 82 VVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 + Q+S+DGT K+ + D + +E+V IPE+D TLCVS+QVGCA C FC TA++GF Sbjct: 90 IARTQQSADGTRKYLFELSDGEHIESVLIPEEDHFTLCVSTQVGCAQGCAFCMTAKKGFV 149 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD-DF 199 RNL +EI GQV A K + + +TN+V+MGMGEPL N +NV+ +++ + D D Sbjct: 150 RNLTPAEITGQVLGALKTLAP-----EERLTNIVLMGMGEPLANYDNVITSLDTICDGDC 204 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 G S RRVTLSTSG+VP + LG V LA+SL+A +++ RD ++PINK Y IE L Sbjct: 205 GLQFSTRRVTLSTSGLVPRMAPLGLATTVNLAVSLNATDNKTRDMLMPINKTYPIEVLLE 264 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPY 319 A R Y +N+ ++T EY+++ VND + A +L +LL+ K+NLIP+N GA + Sbjct: 265 ACRTY---PLSNRRKITFEYILMAGVNDSEKDALRLVKLLRSIKAKVNLIPFNEHEGAAF 321 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 R ++ I+RF ++L +T + R+++G DI AACGQLA D+ Sbjct: 322 KRPDDAAIERFKQILHDRQYTVMTRQSKGADISAACGQLAADI 364 >UniRef50_D0RN88 Radical SAM enzyme, Cfr family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN88_9RICK Length = 357 Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/361 (39%), Positives = 215/361 (59%), Gaps = 11/361 (3%) Query: 18 INLLDLNRQQMREFFK-----DLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 I DLN ++++ F D + RA+QV K+ Y + + +++ + LR +L Sbjct: 2 IEFADLNYREVKSIFSNNFNLDKKKSSMRANQVWKFYYQKGYSDPNLFSNLTQSLRDELL 61 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKF 131 ++ P++ +Q S DGTIKW + + D+ VETVYIP + +TLC+SSQVGC L CKF Sbjct: 62 KIVNFSRPKIKNKQVSKDGTIKWLLELNDKNLVETVYIPSETHSTLCISSQVGCTLNCKF 121 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C T Q +NL +EII Q+ A + K Q+ I N+V MGMGEP N N+ + Sbjct: 122 CHTGIQPLVKNLSSNEIISQILIAKDELNDWK--EQKKINNIVYMGMGEPFYNFENIKKS 179 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 +EI+ D+ G S +++T+STSG+ P + K + I LA+SLHAPN+EIR+EI+PINKK Sbjct: 180 VEILKDENGLNFSNKKITVSTSGISPNIKKAANEIGTYLALSLHAPNNEIRNEIMPINKK 239 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 YNIE + +Y + N ++ IEYV+L VND + A +L++++ PCK+NLI + Sbjct: 240 YNIENIIEHCSQY---AKENGEKIFIEYVLLKDVNDTEQCAKELSKIMSQFPCKLNLIQF 296 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 NP+PG Y ++ + +F +++ G +RK+RGDDI ACGQL + TL Sbjct: 297 NPWPGVKYKTATKEQTSKFIEIIKKNGHVVTLRKSRGDDILGACGQLKTASEREKRSTLS 356 Query: 372 K 372 K Sbjct: 357 K 357 >UniRef50_Q1D6I6 Ribosomal RNA large subunit methyltransferase N 2 n=6 Tax=Cystobacterineae RepID=RLMN2_MYXXD Length = 378 Score = 281 bits (718), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 153/349 (43%), Positives = 215/349 (61%), Gaps = 14/349 (4%) Query: 18 INLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +++ L+ + + F ++LGE+ FRA Q+ +W++ +FDEMTD++KVLR KL+ AE Sbjct: 24 VDVASLSLEALSRFVTEELGERAFRAPQIYRWLHQRGATSFDEMTDLSKVLREKLRARAE 83 Query: 77 IRAPEVVE-EQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P V + E RS+DGTIK+ D R +E+VY+P +DR TLCVS+QVGCA+ C FC T Sbjct: 84 I-VPLVKDCELRSTDGTIKYRWKTRDGRYIESVYMPTEDRRTLCVSTQVGCAMACGFCMT 142 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ---RPITNVVMMGMGEPLLNLNNVVPA 191 G RNL SEI+ QV + V K G RP++N+V MGMGEPL N N+ A Sbjct: 143 GTMGLKRNLTPSEIVAQVHAVNREV--RKNEGHETLRPLSNLVFMGMGEPLHNFENLKTA 200 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 + I+ + G S R +T+ST G+VP +++ G DV LAISL+A DE R + +P+N+K Sbjct: 201 LSILQSEDGPNFSHRHITVSTVGLVPMIERFGKETDVKLAISLNASTDEQRSKTMPVNRK 260 Query: 252 YNIETFLAAVRRYLEKSNANQG-RVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 +NI L A R++ + QG R+T EYV++ ND E AH+L ELLK P K+NLIP Sbjct: 261 WNIAALLDACRKFPLR----QGRRITFEYVLIKGFNDADEDAHRLIELLKGIPVKVNLIP 316 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 +N PG + + R + F +L +R+ RG DI ACGQLA Sbjct: 317 YNENPGLGFHTTGEERAEEFRAILADGHVAAYIRRNRGRDIAGACGQLA 365 >UniRef50_B8DRU2 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Desulfovibrionales RepID=RLMN_DESVM Length = 367 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 149/352 (42%), Positives = 213/352 (60%), Gaps = 19/352 (5%) Query: 18 INLLDLNRQQMREFFK-DLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 I++L+L ++ + LGE FRA QV +W++ +FD MT+++K R +L E A Sbjct: 2 IDILNLTYDELEAWMTGTLGEPRFRARQVWQWLWQKNARSFDAMTNVSKATRARLAEAAR 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDR-----ATLCVSSQVGCALECK 130 I PEV + SSDGT+K+ +A+ D VETV IP + R T C+S QVGCA+ C Sbjct: 62 ITWPEVRTVKTSSDGTVKFLLALADGALVETVLIPSESREGKVRMTQCLSCQVGCAMGCT 121 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP----ITNVVMMGMGEPLLNLN 186 FCST GF RN+ ++EI+GQV +V + RP + N+V MGMGEPLLNLN Sbjct: 122 FCSTGSMGFERNMTMAEILGQV-----LVAREHLGDDRPDHPIVRNLVFMGMGEPLLNLN 176 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIV 246 V+ ++ + D+FG S RR+T+ST G+ L +LG+ LA+SLHAPN E+R I+ Sbjct: 177 EVMRSLRTLNDEFGLCFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEVRARIM 236 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 P ++ ++ +AA+ Y K+ + R+T EY++L VND +HA +L L+ T K+ Sbjct: 237 PRAARWTLDDLMAALESYPLKT---RERITFEYLLLGGVNDSIDHARELVRLVSRTKAKL 293 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 NLI +NP G PY S +RI F + L S T I+RK++G DI AACGQL Sbjct: 294 NLIVYNPAEGLPYEAPSQARILAFEQYLWSKNVTAIIRKSKGQDIKAACGQL 345 >UniRef50_Q7UHU7 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Rhodopirellula baltica RepID=RLMN_RHOBA Length = 371 Score = 276 bits (707), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 148/357 (41%), Positives = 222/357 (62%), Gaps = 12/357 (3%) Query: 5 LVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDIN 64 + T ++ +T K +LL+ + Q++++ ++ G+KPFRA Q+ +W++ +F+EMTD+ Sbjct: 13 VTTTDSESTGPRKNHLLNWSLDQLKDWLQEQGQKPFRAKQIRRWLFSGRATSFEEMTDLP 72 Query: 65 KVLRGKLKE-VAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQ 122 LR +L+E A A E V +S DGT K + + D VE V + + R ++CVSSQ Sbjct: 73 AKLRAQLEEHFAIFNATEAVVS-KSKDGTEKILVRLADGGEVECVLLRDGPRRSICVSSQ 131 Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL 182 VGCA+ C FC++ G +RNL EI+ Q+ R + ++ ++++VMMGMGEPL Sbjct: 132 VGCAMGCVFCASGLDGVDRNLTGGEILEQMLRLQQ-----RLPADERLSHIVMMGMGEPL 186 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEI 241 NL V+ A+++ + G G+S RR+T+ST G+ PA+DKL I LA+SLHAPNDE+ Sbjct: 187 ANLPGVLSALDVARSEDGLGISPRRITISTVGLPPAIDKLAAAGIPYNLAVSLHAPNDEL 246 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 R E+VP+N+K IE L A RY S R+T EYV+L +NDG EHA QL+++L+ Sbjct: 247 RSELVPVNRKIGIEPVLQAADRYFHASGR---RLTFEYVLLGGINDGDEHARQLSQILRG 303 Query: 302 TPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +N+IP+NP G PY S + I RF +L S G R+ +GD+I+AACGQL Sbjct: 304 RSVMMNVIPYNPVAGLPYRTPSGAAIARFRAILESAGVNVNFRQRKGDEINAACGQL 360 >UniRef50_Q6MPV7 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Bdellovibrio bacteriovorus RepID=RLMN_BDEBA Length = 399 Score = 270 bits (690), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 138/343 (40%), Positives = 209/343 (60%), Gaps = 10/343 (2%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 +N L + ++ + K G++ FRA Q+ KW+Y + ++MT+++K R L + Sbjct: 28 VNFYSLTLEDLKAYIKSKGKEQFRAQQIFKWVYEQRVTDPEQMTNLSKEFRQDLPSMLSF 87 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 P V++ +S DGT K+ + D VE V IP +DR TLC+SS+VGC + CKFC T + Sbjct: 88 DLPPVLQHLKSVDGTQKFLFDMKDGMSVEAVVIPSEDRLTLCISSEVGCNMACKFCFTGK 147 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 Q R LR +I+GQ + V GQR ITN+V MGMGEPL N V ++++ Sbjct: 148 QKLKRRLRTEDIVGQFMQ----VHDRLAEGQR-ITNIVFMGMGEPLDNPEAVFKTIDVIH 202 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 +G LS++++T+STSG+VP + ++ D V LA+SL+ PNDEIR +++PINK+++ + Sbjct: 203 SPWGINLSRKKITVSTSGIVPEMWRVADA-KVRLAVSLNGPNDEIRSQVMPINKRWDTKA 261 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A + E ++ ++T EYV+L + D EHA QL +L+KD PCKIN+IP+N PG Sbjct: 262 LLEACK---EHYRVSKDKITFEYVLLKGITDQLEHARQLVKLVKDVPCKINIIPFNEHPG 318 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 + Y R + I F LM+ G ++R++ G DI AACGQL Sbjct: 319 SGYERPDDDTIQAFHTELMNLGAHVLLRRSMGRDIFAACGQLT 361 >UniRef50_C6I0U3 Radical SAM family protein n=3 Tax=Leptospirillum RepID=C6I0U3_9BACT Length = 357 Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 149/352 (42%), Positives = 207/352 (58%), Gaps = 7/352 (1%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE-VAE 76 +NLLD E + G +R QV W+Y + +M++I +R L Sbjct: 1 MNLLDHPPSTWGEILEKRGHPAYRGRQVAHWVYQRLTTDPRKMSNIPPGVRDLLSSGTLS 60 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + P V+ +S DGT+K A+ + D V E+V IP + TLC+S+Q GC + C+FC TA Sbjct: 61 LDLPTVLSTAQSLDGTVKMALRLQDGPVIESVLIPRKGQWTLCLSTQAGCGIGCRFCRTA 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G RNL +EI+ Q AA+ V G+ I ++V MGMGEPL NL ++PA+ + Sbjct: 121 SMGLTRNLSTAEILSQWLLAARFVETLP-PGESHIDHIVFMGMGEPLANLEALIPAIRSL 179 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 G GLS RR+T+STSG+VP +D LG+ V LAISL AP+D +R EI+P+ + Y+I Sbjct: 180 THPDGAGLSPRRITVSTSGLVPRIDTLGEANTGVRLAISLCAPDDALRREIMPVGRIYSI 239 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E LAA RR+ + N+ R+T EYV+L VND A QL LL K+NLIP+NPF Sbjct: 240 EEILAACRRFPLR---NRDRITFEYVLLAGVNDSPLQARQLGRLLAPFRSKVNLIPFNPF 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 PG+PY R ++S + F +VL + T VRK+ G D+ AACGQLA + D T Sbjct: 297 PGSPYHRPTDSSVAAFQEVLAGFHITATVRKSMGPDVLAACGQLARESQDHT 348 >UniRef50_Q54J76 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54J76_DICDI Length = 407 Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 143/357 (40%), Positives = 209/357 (58%), Gaps = 5/357 (1%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 KINL+ + + ++ + LG + ++Q+ +MY+ + + ++K R ++K E Sbjct: 48 KINLIGIQKDELEDKVLKLGYPKYLSEQIWAFMYNKGIVDINSFERVSKEKREEIKSKYE 107 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 + E+ + Q S DGT K I+ VE+V+IPE R TLCVSSQVGC C FC T Sbjct: 108 VNIGEITKHQLSVDGTRKLLISFDGAEVESVFIPEGKRGTLCVSSQVGCTFACTFCHTGT 167 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVG-AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q F RNL SEI+ QV ++ + +R +TN+V MG GEP N NV A++I+ Sbjct: 168 QKFIRNLTASEIVSQVIATRHVLNDFTDSSIKRTLTNIVFMGQGEPFYNYRNVSKAIKII 227 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D G + K ++T+STSGVVP +D+LG D + LAISLH+ ND+ R EIVP N+++ I Sbjct: 228 TDPNGLAIGKSKITVSTSGVVPLIDRLGSDFPGIGLAISLHSANDKTRSEIVPANRQWPI 287 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + A ++ S + R+TIEYVML VND + A+ L +L K P +NLIP+NP+ Sbjct: 288 SELVEACIKF---SKNCKERITIEYVMLKGVNDSEQDAYDLVKLSKSFPSFVNLIPFNPW 344 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 PG+ Y SS I +FSK+L G +R+ RG DI AACGQL + I + ++ Sbjct: 345 PGSQYKSSSKETISQFSKILDDKGIKVTIRQPRGRDILAACGQLNTESIKEINKPIQ 401 >UniRef50_Q7X370 Putative uncharacterized protein n=2 Tax=uncultured Acidobacteria bacterium RepID=Q7X370_9BACT Length = 413 Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 141/361 (39%), Positives = 215/361 (59%), Gaps = 21/361 (5%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + + + ++ + R ++ + LG F A Q+ +W+Y +F M+D+ + LR + Sbjct: 42 IMSNHTRTDIAESERHELEHTLERLGHPRFHARQIFQWVYKRGITDFALMSDLGRDLRAQ 101 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----------RATLC 118 L E I P V ++RS DGT+K+ + + D R +E+V+IP++ R T C Sbjct: 102 LAESCVITTPVVERQERSQDGTVKFLLRLADGRHIESVFIPDETPAGPDGSPRAARITFC 161 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 VS+QVGCA++C FC T + G +R+L EI GQV A+ +G + N+V+MGM Sbjct: 162 VSTQVGCAMKCAFCLTGKMGIDRSLTAGEIAGQVRVLARELGFLETR-----FNIVLMGM 216 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAP 237 GEPL N + A+ ++ D+ GF +S RR+TLST GV+PAL++L + + LAISLHA Sbjct: 217 GEPLHNYEETMKALRVLADEHGFAMSARRMTLSTVGVLPALERLATEPLMPNLAISLHAT 276 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 ++ RD +VPIN+KY ++ L A RR+ K + R+T EYV+L VND E A +L + Sbjct: 277 TEDQRDLLVPINRKYGLKELLDACRRFPLK---RRERITFEYVLLREVNDTPEDARRLVK 333 Query: 298 LLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQ 357 LL K+NL+P N G P+ R S+ R++ F+++L +G VRK+RG DI AACGQ Sbjct: 334 LLHGIKGKVNLLPLNEAAGIPFERPSDDRVNSFARILADHGIPVSVRKSRGRDIRAACGQ 393 Query: 358 L 358 L Sbjct: 394 L 394 >UniRef50_Q0AXL8 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RLMN_SYNWW Length = 357 Score = 267 bits (683), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 143/352 (40%), Positives = 214/352 (60%), Gaps = 10/352 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K LL L+ QM EF L E FR QV KW+Y C +F EM+D+ + LR KL E A Sbjct: 6 KKQLLGLDLNQMEEFLLGLEEPRFRGRQVYKWIYQKECSSFYEMSDLPRSLRKKLDEKAR 65 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPE--DDRA--TLCVSSQVGCALECKF 131 + P V++++ DG+ K+ + + D++ +E V +P+ D ++ TLC+S+QVGC + C F Sbjct: 66 VSIPRVLKQRVGKDGSRKFLMELDDKKKIECVLLPQSRDKKSSYTLCLSTQVGCPIACSF 125 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAK-IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 C+T Q GF RNL+ EIIGQ + K + K I+NVV MGMGEPLLN + V+ Sbjct: 126 CATGQSGFQRNLKAFEIIGQYLGSKKELSKRLKSPRAELISNVVYMGMGEPLLNYDEVIK 185 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 ++ ++ D G L +RR+T+STSG V + KL + I + LAISLHA ++ +RD+++P+N Sbjct: 186 SVHMLNDPRGINLGQRRITISTSGEVAGIKKLAQENIQLTLAISLHACDNSLRDQLIPLN 245 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 +KY +E A+ Y+ + RVT EY++LD VN A+++ +LLK +NLI Sbjct: 246 RKYPLEVLFPAIEDYIAFTGR---RVTFEYLLLDEVNMSRNDANKMVKLLKPLLANLNLI 302 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P+N G P+ + ++I +F + L G +R+ RG DI+AACGQL D Sbjct: 303 PYNEIEGLPFKKPETAKIWQFYQWLQDGGLNVSIREERGSDINAACGQLRSD 354 >UniRef50_C1TNK6 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNK6_9BACT Length = 341 Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 147/343 (42%), Positives = 208/343 (60%), Gaps = 15/343 (4%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 L+ N + R F + GE +RADQ+ +W+Y + MT+++K LR KL+ ++ P Sbjct: 8 LEFNYDEWRNFVDEAGEPSYRADQLCQWIYGKKVFDIHRMTNLSKDLRSKLEGHLYVQPP 67 Query: 81 EVVEEQRSSDGTIK--WAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG 138 V+ Q+SSDGT+K W G Q VE+V + + T C+S+QVGC L C FC+T +QG Sbjct: 68 FAVDVQKSSDGTVKFLWRFLDG-QEVESVLMDHGNHHTACLSTQVGCPLRCDFCATGRQG 126 Query: 139 FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 F RNL V EI+G +G + I N+V MGMGEPLLN NV A+EI+ Sbjct: 127 FVRNLTVGEIVGHFLAMESWLG-------QDIKNIVFMGMGEPLLNWENVKKAIEILNHP 179 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 G+ RR+T+STSGVVP + L D +DV L+ SLHAPND+IR +++P+N++Y + Sbjct: 180 KMRGMGIRRITISTSGVVPGILALADSGLDVRLSFSLHAPNDQIRSKLMPVNERYPLGQV 239 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGA 317 + A++ + +K+ R+T+EYV+L +ND A+++A LL D INLIP+NP Sbjct: 240 VEALQEFQKKTG---NRITVEYVLLKRINDEPSMAYEIAALLSDLDVYINLIPYNPVV-E 295 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 YGR S SRI+ F L G +RK +G DIDAACGQL G Sbjct: 296 RYGRPSASRINPFMATLRELGLEVELRKEKGTDIDAACGQLRG 338 >UniRef50_Q11QF0 Ribosomal RNA large subunit methyltransferase N n=32 Tax=Bacteroidetes RepID=RLMN_CYTH3 Length = 365 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 140/353 (39%), Positives = 216/353 (61%), Gaps = 8/353 (2%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 + +T+ K + L+ +++++FF GEK FR+ QV +W++ +F++MT+++K R Sbjct: 14 QTTSTEIKKKCIRSLSAEELKDFFVASGEKAFRSRQVYEWLWKRSARSFEQMTNLSKETR 73 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCAL 127 L+ I + ++Q S+DGTIK+ + D VE V IP DDR T C+SSQVGC+L Sbjct: 74 TLLENNFSINPVTISQKQVSTDGTIKFGFKLHDGYLVEGVLIPADDRMTACISSQVGCSL 133 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 CKFC+T RNL EI QV I AA+ Q P+TN+V+MGMGEPLLN N Sbjct: 134 TCKFCATGYMDRKRNLEPYEIYDQV---VLIKEAAEEHYQTPLTNIVLMGMGEPLLNYTN 190 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIV 246 V+ ++ + + G ++ +R+TLST+G+ + KLGD + LA+SLHA ND R+ I+ Sbjct: 191 VLKGIDKVTSEEGLHIASKRITLSTAGIAKMITKLGDEKVKFRLALSLHAANDVKRNTIM 250 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 PIN+ N+ ++ + +++ ++ VT EY++ D VND + A +L K+ PCKI Sbjct: 251 PINETNNLNVLKESLLHFCKETGSS---VTFEYIVFDGVNDTAQDAKELYAFAKNIPCKI 307 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 N+I +NP A + +S ++++F KVL G +R++RG DIDAACGQLA Sbjct: 308 NIIEYNPIQEADFMNTSVDKLEQFKKVLTDKGIIVNIRRSRGKDIDAACGQLA 360 >UniRef50_D1Y601 23S rRNA m2A2503 methyltransferase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y601_9BACT Length = 365 Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 145/357 (40%), Positives = 209/357 (58%), Gaps = 13/357 (3%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKP-FRADQVMKWMYHYCCDNFDEMTDINKVLR 68 N K K N ++ F ++ + P + ADQ+ +W+Y +F MT+++K LR Sbjct: 18 NAPEKATKRNAFEMTLADWERFVQEELDMPRYTADQLCQWIYKKKVFDFRAMTNLSKALR 77 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCAL 127 +L E+ EIR P++ + Q ++DGT K+ + D + VE+V + + T C+SSQVGC L Sbjct: 78 ERLPELLEIRLPKLAKRQTAADGTRKYLWRLDDGEYVESVLMDHGNHYTACISSQVGCPL 137 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C+FC+T QQGF RNL EI+ VG I NVV MGMGEPLLN N Sbjct: 138 RCEFCATGQQGFKRNLSAGEIVSHFAAMESDVG-------HDINNVVFMGMGEPLLNYEN 190 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIV 246 VV A+ + L+ GLS R VT+STSG+ + +L D +D+ L +SLHAPN+E+R I+ Sbjct: 191 VVKAVRMFLEPKMRGLSVRHVTISTSGIPEGIRRLADEGLDIYLCLSLHAPNNELRSRIM 250 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 P+N+++ + +A+ + +K+ R+TIEYVML +VND + A++LA L + + Sbjct: 251 PVNERFPLGAVFSALEYWQKKTGV---RLTIEYVMLKNVNDTPDCAYELATLFSNLQVYV 307 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 NLIP+NP G + R S SRI F K+L VRK G DIDAACGQL G + Sbjct: 308 NLIPYNPVAGTQFARPSASRIAPFMKILKGLNVECEVRKEHGADIDAACGQLRGKTV 364 >UniRef50_B5YF42 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Dictyoglomus RepID=RLMN_DICT6 Length = 348 Score = 263 bits (671), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 145/342 (42%), Positives = 205/342 (59%), Gaps = 10/342 (2%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+L + ++R+ + GE +RADQ+ W+Y N MT++ K LR K+ E Sbjct: 3 NILSFDIDEIRDILRGWGEPSYRADQIFDWVYKKLILNPSSMTNLPKGLRQKIAEYFSFD 62 Query: 79 APEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 P+VV+ + T K+ + + D + +ETV I +R T+CVS QVGCA+ CKFC+T Sbjct: 63 IPKVVKITGEGN-TKKYLLELEDGENIETVLISHKNRNTVCVSVQVGCAIGCKFCATGLV 121 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G RNL EI+GQ+ K + G R I+NVV MGMGEPLLN +NVV ++ I+ Sbjct: 122 GLRRNLNTHEIVGQIILIQKELFEK---GDR-ISNVVYMGMGEPLLNYDNVVKSIRIINR 177 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 ++G + + +TLST G+VP + +LG+ + V LAISLHAPN+E+R +I+PINK+Y IE Sbjct: 178 EWGLNIGSKHITLSTIGIVPKIYQLGEEDLKVRLAISLHAPNNELRSKIIPINKEYPIEK 237 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L + Y EK+ RVT EYV++ + ND EHA +LA LLK+ P +NLIPWN P Sbjct: 238 LLESAFYYAEKTGR---RVTFEYVLIKNFNDREEHAIELAGLLKNKPVHVNLIPWNKVPE 294 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P+ S I +F K+L G +R + G I A CGQL Sbjct: 295 YPWETSDLKDIFKFKKILSDAGINVTLRISYGSRIKAGCGQL 336 >UniRef50_C0GIQ5 Radical SAM enzyme, Cfr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIQ5_9FIRM Length = 347 Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/349 (41%), Positives = 208/349 (59%), Gaps = 9/349 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K+NLL+L+ +++EFF+ LG+ FRA QVM W+Y F+EMT++ K LR +L + A Sbjct: 3 KVNLLELSTSELQEFFQSLGQPAFRAKQVMDWLYQQGAQTFNEMTNLPKGLREQLAQKAV 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 VV EQ S DGT K+ A+ D Q VETV +P D + C+S+QVGC + C FC++ Sbjct: 63 PGFLSVVTEQVSEDGTEKYLFALPDGQTVETVVLPYDIGFSACISTQVGCKMGCLFCASG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 GF RNL +EI+ QV ++ A + G+ + ++V+MG GEPL N + +E + Sbjct: 123 LPGFVRNLTAAEIMAQVL---QVKNALRKRGKE-LKSLVLMGSGEPLDNFRETIAFLEAV 178 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 D +S R VTLSTSG+VP +++L + + LA+SLHA N+ +RD+I+P+NK Y + Sbjct: 179 RDPQKLAMSLRHVTLSTSGLVPKIEELAKLGWPLNLAVSLHASNNRVRDKIMPVNKTYPL 238 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L+A Y S A RVT EY+++D +ND TEHA +LA LLK C +NLIP N Sbjct: 239 EPLLSACDTY---SRATGRRVTYEYILIDRLNDKTEHAKELASLLKGRLCHVNLIPLNAV 295 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 S + + +F L G VR+ G DI AACGQL + + Sbjct: 296 DELGLKPSPQNTVKQFRDTLRQKGVNVTVRRKLGADIAAACGQLRNEYL 344 >UniRef50_C4Z523 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Firmicutes RepID=RLMN_EUBE2 Length = 350 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 138/339 (40%), Positives = 204/339 (60%), Gaps = 13/339 (3%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 LN ++ + LGEK FRA Q+ +WM+ D+FDE T+++ LR KLKE +E E Sbjct: 7 LNYDELVTYMAGLGEKKFRAGQLYQWMHEKLADSFDECTNLSNALRQKLKETSEYVCLEP 66 Query: 83 VEEQRSS-DGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 V Q S DGT K+ + D VE+V + ++C+SSQVGC + C+FC++ G Sbjct: 67 VRVQHSKLDGTEKYLFRLSDGNYVESVLMKYHHGNSVCISSQVGCRMGCRFCASTLNGKV 126 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 R+LR SE++ Q++R KI TG+R ++NVV+MG GEP+ N +N++ +E++ D+ G Sbjct: 127 RDLRPSEMLDQIYRIQKI------TGER-VSNVVVMGSGEPMDNYDNLIKFIELLNDERG 179 Query: 201 FGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 +S+R +T+S+ G+VP L +L D+ + + LAISLHAPNDE+R ++PI KY+IE + Sbjct: 180 LNISQRNITVSSCGIVPKLKELADLKLQITLAISLHAPNDELRKTMMPIANKYSIEEIMD 239 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPY 319 R Y+E + R++ EY ++ VND E A QL EL+K C INLIP NP Y Sbjct: 240 VCRYYIECTGR---RISFEYSLVKGVNDSMECAKQLIELVKGMNCHINLIPVNPIKERDY 296 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 ++ + F L G +R+ G DID ACGQL Sbjct: 297 KQTGKEEVYAFKNKLEKNGINVTIRREMGRDIDGACGQL 335 >UniRef50_A6TRW3 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Firmicutes RepID=RLMN_ALKMQ Length = 352 Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 136/351 (38%), Positives = 210/351 (59%), Gaps = 14/351 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K++LL L ++M F ++GEK FRA Q +W+ + ++EMT+++K L +L E Sbjct: 3 KVDLLSLTMEEMESLFLEIGEKKFRAKQAFQWV-NKGIKQYEEMTNLSKKLIKQLSEETR 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 I + E+ S DGT+K+ + D + E V + T C+S+QVGCA+ C+FC++ Sbjct: 62 ITHNRIEEKFVSKIDGTVKYLFLLDDGHIIEGVLMKYKHGFTACISTQVGCAMGCQFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNLR E+I Q I+ + G+R I+N+V+MG GEPL N + + ++I Sbjct: 122 TTGGLIRNLRAGEMIDQ------ILLMQQDQGER-ISNIVLMGSGEPLHNYDETIRFLKI 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + D G + R +TLST G+VP + KLG + I + LAISLHAPND++R + +PI +KY Sbjct: 175 VNDPEGLNIGNRHITLSTCGLVPEIKKLGALQIPINLAISLHAPNDQLRKQTMPIAQKYT 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I+ + + YLE +N R+T EY +++ VNDG + AH+L++LLK C +NLIP NP Sbjct: 235 IDQLIQSCYDYLENNNR---RITFEYALIEDVNDGEKEAHELSKLLKGLLCHVNLIPINP 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 Y +S +S++ +F ++L S G +R+ G DI ACGQL +D Sbjct: 292 IEERTYQKSKDSQVKKFQQILKSNGIEATIRREMGTDIQGACGQLRRKYVD 342 >UniRef50_C1A949 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RLMN_GEMAT Length = 360 Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 145/345 (42%), Positives = 199/345 (57%), Gaps = 21/345 (6%) Query: 30 EFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSS 89 E+ GE +RA QV ++ +FDEMT++ K LR L I A E+ Q+S Sbjct: 21 EWMAARGEPAYRAAQVFGRLWQRPVRSFDEMTELPKALREGLAGSFRITALELTTRQKSM 80 Query: 90 DGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEI 148 DGT K+ + D Q +ETV IP+ DR T C+SSQ GCAL+C FC+T GF RNL SEI Sbjct: 81 DGTEKFLFRMHDGQLIETVAIPDGDRLTFCISSQAGCALQCAFCATGAMGFQRNLHPSEI 140 Query: 149 IGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRV 208 GQV R +++ + V TN+V MGMGEPL+N V P + ++ D G+ R + Sbjct: 141 AGQV-RELRMLTPSIVP-----TNIVFMGMGEPLMNWKAVSPTLSLLNDPRALGIGARHI 194 Query: 209 TLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK 267 T+ST GV+P + L + LAIS+HAP+D +R ++P+N KY + +AA R + Sbjct: 195 TISTVGVLPGIVALAARPEQFRLAISIHAPSDALRRTLMPVNTKYPLADVIAAAREF--- 251 Query: 268 SNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRI 327 RVT EYVML VND EHA QLA+L +D +NLIP +P + S+ I Sbjct: 252 ----DRRVTFEYVMLGGVNDQPEHAAQLAQLARDCRAFVNLIPLHPGGSMGFSPSTTPTI 307 Query: 328 DRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRK 372 + F+K + + G T VR++RG DI AACGQL RT+R R+ Sbjct: 308 NAFAKAIRARGVETAVRRSRGLDIAAACGQL------RTERLGRR 346 >UniRef50_Q2S0P9 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Rhodothermaceae RepID=RLMN_SALRD Length = 369 Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 135/361 (37%), Positives = 216/361 (59%), Gaps = 16/361 (4%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 V T + +++L + R +++F + G +R DQ+ W+Y +FD M+++ K +R Sbjct: 11 VGTAEDRVDLKTMGRAGLKDFVAEHGAPRYRGDQLFNWVYGKGVSDFDRMSNLPKRMRRG 70 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD------RATLCVSSQV 123 L+ A + E+VE+Q+++D T+K + R ETV IP D R T+CVSS+V Sbjct: 71 LQRDATVEDIEIVEQQQAADRTVKALFELPSGREAETVLIPAIDERGEARRLTVCVSSEV 130 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCA+ C+FC+T + GF NL I QVW ++ A+ RP+TN+V MGMGEPLL Sbjct: 131 GCAMGCEFCATGRMGFRENLTPGAIFDQVWHMNEV---AQEHFGRPVTNIVFMGMGEPLL 187 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIR 242 N + V+ ++ I+ D+ LS +++T+ST G+ + L D + LA+SLHAP++E R Sbjct: 188 NYDAVLDSISILTDEDSLNLSAQKITVSTVGLARRIKDLADDQLRTNLAVSLHAPDNETR 247 Query: 243 DEIVPINK--KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 I+P+N+ K ++ A++ Y +K+ ++T EY + VND A LA++ + Sbjct: 248 SRIMPVNEAEKTSLPALKEALQYYFDKTGR---QITYEYCLFKGVNDSETDARNLADVTR 304 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 P K+NL+ +NP G + R+S +++DRF +VL+ G T VR++RG DIDAACGQLA Sbjct: 305 WAPSKVNLLMYNPVEGLNFERTSEAQLDRFVQVLVQEGVTVTVRRSRGQDIDAACGQLAN 364 Query: 361 D 361 + Sbjct: 365 E 365 >UniRef50_B5YHG3 Radical SAM enzyme, Cfr family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHG3_THEYD Length = 342 Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 137/346 (39%), Positives = 214/346 (61%), Gaps = 11/346 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K NL +L +Q+ + D +R+ Q+++W+Y D+ +++T+ +K LR + E Sbjct: 3 KQNLKELTTKQIEKIILDESLPLYRSKQIVQWIYKKFVDSINDITEWSKSLRERFSEKYY 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I + +++ S DGTIK+ + D +++E+V I + DR TLCVSSQVGC L+CKFC T Sbjct: 63 IGRINLFDKRISIDGTIKFLWELEDGEKIESVLISDKDRLTLCVSSQVGCMLKCKFCLTG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G RNL+ EI+ Q + +KI+ R ITN+V MGMGEPLLN NVV A+ + Sbjct: 123 KIGLKRNLKAWEIVDQYIQVSKIIQKE----NRKITNIVFMGMGEPLLNFENVVEALWRL 178 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D F S R+TLST+G++PA+ +L + LAISL+A +++ R ++PINKKY + Sbjct: 179 KDLILF--SPSRITLSTAGIIPAIKELPYKAPAIKLAISLNATDNKTRSYLMPINKKYPL 236 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + +R Y K + R+T EY+++ +N + A++L+ELLK P KINLIP+NP+ Sbjct: 237 HELIKTLRDYPLKP---RHRITFEYILIKGINCSEKDAYRLSELLKGIPSKINLIPFNPW 293 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 G + R ++ I F ++L + G++ +RK++G DI AACGQL Sbjct: 294 EGCEFERPEDNEILNFQEILAARGYSVFIRKSKGTDILAACGQLKA 339 >UniRef50_D2R822 Radical SAM enzyme, Cfr family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R822_9PLAN Length = 391 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 135/334 (40%), Positives = 201/334 (60%), Gaps = 10/334 (2%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQ 86 +++ + + G +RA QV KW++ +FDEMTD+ K LR +L + +VV + Sbjct: 45 ELKTWLTERGYPAYRATQVRKWVFELGASSFDEMTDLPKKLRDELAPEFTLWTGKVVTKS 104 Query: 87 RSSDGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRV 145 S DGT K + G R+E V + + DR ++CVSSQVGCA+ C FC++ G +RNL Sbjct: 105 ESPDGTEKLLVEYPGGGRIECVLLRDGDRRSICVSSQVGCAMGCVFCASGLDGVDRNLTA 164 Query: 146 SEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK 205 EI+ Q+ +++ + ++++VMMGMGEPL N+++V+ A+ + G G+S Sbjct: 165 GEIVEQMLLLQRLLPE-----KERLSHIVMMGMGEPLANIDHVLEALGEATREDGLGISP 219 Query: 206 RRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRY 264 RR+T+ST G+ ALDKL ++ LA+SLHAPN+E+R +VPINK IE + + RY Sbjct: 220 RRITISTVGLPAALDKLCNLEAKYHLAVSLHAPNNELRTRLVPINKAIGIEKVIESADRY 279 Query: 265 LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSN 324 E S R+T EYV+L VND +HA +LAELL +N+IP+NP G PY S Sbjct: 280 FETSGR---RLTFEYVLLAGVNDHPDHAQELAELLAGRTAMLNVIPYNPVAGLPYKTPSG 336 Query: 325 SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + I RF +L+ G R+ +G +I+AACGQL Sbjct: 337 NAIHRFRNILVDAGINVKFRQRKGSEINAACGQL 370 >UniRef50_Q0F1H4 Radical SAM superfamily protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1H4_9PROT Length = 357 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 200/349 (57%), Gaps = 13/349 (3%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMY-HYCCD-NFDEMTDINKVLRGKLKEVAEIRAP 80 +N Q+ G P AD++ ++ HY D + + D+ LR L E + P Sbjct: 10 MNHDQLLALCGAAGVSPAHADRLRAAIFRHYGSDTDINNTPDLPLRLRSYLAEHTALLQP 69 Query: 81 EVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 DGT K +A+ D R VETV IP + R T C+S+QVGCA+ C FC TA G Sbjct: 70 ASTATSEGEDGTRKLLLAMADGREVETVLIPGNGRLTQCISTQVGCAVGCTFCLTATAGL 129 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL +E++ +V +I G R + N+V+MGMGEPL N + V + + D Sbjct: 130 TRNLTAAEMVAEVTAGQRISG-------RQVRNLVLMGMGEPLHNYDEVAHFVRLATDPK 182 Query: 200 GFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G S RVTLSTSG+VPA+ ++ D + LA+SL+A ND +RD I+PIN+KY I L Sbjct: 183 GMAFSPNRVTLSTSGLVPAMQRMIRDELPCNLAVSLNATNDAVRDTIMPINRKYPIAMLL 242 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 VR Y+ + N+ RV IEYV+LD +ND A +L EL+ C +NL+P+N +PG P Sbjct: 243 DTVREYI-RVRGNK-RVLIEYVLLDGINDSQADAIRLCELMAGMGCTVNLLPFNAYPGLP 300 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 + R +++ + F +L+ G T+VR+++G DI AACGQL +V+ R K Sbjct: 301 FQRPADAAVSAFRAILVEAGIITVVRESKGRDIAAACGQLKTEVVQRRK 349 >UniRef50_Q6MDD0 Ribosomal RNA large subunit methyltransferase N 2 n=2 Tax=Parachlamydiaceae RepID=RLMN2_PARUW Length = 358 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 138/342 (40%), Positives = 203/342 (59%), Gaps = 12/342 (3%) Query: 22 DLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPE 81 D + Q++ E+ K GEK F A Q++ W+Y ++D+M+++++ LR KL + + E Sbjct: 5 DFDHQKLVEWLKAHGEKEFHAKQILSWIYQKGVLSWDKMSNLSQSLREKLAKHIRLPVLE 64 Query: 82 VVEEQRSSDG-TIK--WAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG 138 +V S D TIK W + G+ VE+V I R T+CVSSQVGC +C FC++ QQG Sbjct: 65 LVRYTESIDQETIKFLWRLRDGN-LVESVLILSGIRRTVCVSSQVGCPAKCAFCASGQQG 123 Query: 139 FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 F RNLR +EII Q+ + + A + +++VV MGMGEPL N +VV ++ ++ Sbjct: 124 FFRNLRPTEIIEQILQ----INAWLSSKGEKVSHVVYMGMGEPLKNYESVVASIRVLSHP 179 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 +S+RR+T+ST GVV + +L + + V L +SLHAPN IR +I+P +KY +E Sbjct: 180 DFCNISQRRITVSTVGVVEGIKRLSKEGLKVNLVLSLHAPNQHIRKKIIPYARKYPLEEI 239 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGA 317 L ++ Y +K+ + +T EY +L +ND +HAH+LA LLK C +NLIP+NP PG Sbjct: 240 LESMDEYAQKTKRD---ITFEYTLLAGINDHPDHAHELAHLLKGKQCTVNLIPYNPIPGL 296 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 R I +F VL R T+GDDI AACGQLA Sbjct: 297 RLKRPEKKAIKQFRSVLYGSHIVNTCRYTKGDDIGAACGQLA 338 >UniRef50_C9M5U8 Radical SAM enzyme, Cfr family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5U8_9BACT Length = 352 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/360 (40%), Positives = 209/360 (58%), Gaps = 14/360 (3%) Query: 17 KINLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +I L+L+ + ++ G K F ADQ+ +W+Y +++ MT+++K LR L E Sbjct: 4 RIQGLELSYDEWLTLIQEQFGAKKFVADQICQWIYQKKVFDWNGMTNLSKDLRAALAERV 63 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P +VE Q S+DGT K+ + D RVE+V + + T C+SSQVGC L+C FC+T Sbjct: 64 SIVPPVLVERQISADGTKKYLWELSDGARVESVLMDHGNHLTACLSSQVGCPLKCAFCAT 123 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + GF RN+ EI+G +G +PI NVV MGMGEPLLN NV A+ Sbjct: 124 GRGGFERNMTAGEIVGHFLAMEADLG-------KPIGNVVFMGMGEPLLNFVNVERAIRC 176 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 +L+ G+ R VT+ST+GV + KL D + V L +SLHAPNDE+R ++PIN++Y Sbjct: 177 LLEPKMRGMGVRHVTISTAGVADGIRKLADSGLGVYLCLSLHAPNDELRSRLMPINERYP 236 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + L A++ + K+ R+T+EYV++ V D E A++L L D +NLIP+NP Sbjct: 237 LPQVLDALKYWQGKTGV---RLTVEYVLIKGVTDLPELAYELPTLFSDLQTYVNLIPYNP 293 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 + + R S SRI+ F+K+L G VR+ +G DIDAACGQL +R RKR Sbjct: 294 VIPS-FSRPSASRIEPFAKILRELGMEVEVRREKGTDIDAACGQLRAKKDRPGERETRKR 352 >UniRef50_Q72HC1 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Deinococci RepID=RLMN_THET2 Length = 355 Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 190/325 (58%), Gaps = 9/325 (2%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV 99 +R Q+ W+Y +F EMTD+ K LR L + +V+ S DG++K+ + Sbjct: 23 YRRAQIAHWLYAKGARDFSEMTDLPKALREALAREWRLSEFSLVQAFPSQDGSVKYLFTL 82 Query: 100 GD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKI 158 D ++ E VY+P ++R T+C+S+ VGC C FC+T GF RNL +EI+ Q+ A Sbjct: 83 LDGKKTEAVYMPYENRKTVCLSTMVGCPAGCTFCATGALGFGRNLTAAEILDQLLTIAYH 142 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA 218 G + R I NVV+MGMGEPLLNL NV+ A+ IML LS RRVTLST G+ Sbjct: 143 QGLSP----REIRNVVLMGMGEPLLNLRNVLKAVRIMLHKKALALSPRRVTLSTVGIPKG 198 Query: 219 LDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTI 277 + +L + + V LA+SLHAP+DE R +I+P +Y I + AVR Y K+ + RVT Sbjct: 199 IYRLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMEAVRHYHAKT---KRRVTF 255 Query: 278 EYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSY 337 EY +L VND A LA+LLK +NLIP+NP+ GAP + + + F++ L Sbjct: 256 EYTLLKGVNDHLWQARLLAKLLKGLSAHVNLIPFNPWEGAPVAGTPKAGVLAFAEELKRL 315 Query: 338 GFTTIVRKTRGDDIDAACGQLAGDV 362 G T +R +RG D+ AACGQLA V Sbjct: 316 GVPTSIRWSRGQDVGAACGQLALKV 340 >UniRef50_A3DCX9 Ribosomal RNA large subunit methyltransferase N n=11 Tax=Clostridia RepID=RLMN_CLOTH Length = 349 Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 138/353 (39%), Positives = 211/353 (59%), Gaps = 14/353 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 D K +LL + +++ ++GE+ FRA Q+ +W D D MT+++K LR KLKE Sbjct: 2 DAKADLLSMTIEELENLMAEMGEQKFRAKQIFQWTNKGIKD-IDAMTNLSKDLREKLKER 60 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 A I EV+++ S DGTIK+ + D + E+V + + C+SSQVGC + CKFC Sbjct: 61 AYINRLEVIKKFVSKIDGTIKYLFKLNDGNIIESVLMQYLHGYSACISSQVGCKMGCKFC 120 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL E++ Q+ + + I NVV+MG+GEPL N NVV + Sbjct: 121 ASTGVGFVRNLTPGEMLDQIL-------TIQNDTKNRIGNVVIMGIGEPLDNYENVVKFL 173 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKK 251 ++ G L R +++ST G+VP + +L + I V L+ISLHAPNDEIR++I+PINK+ Sbjct: 174 RLVNHKDGINLGARHISVSTCGLVPEILRLAEEKIPVTLSISLHAPNDEIREKIMPINKR 233 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y+I+ + A + Y E +N R+T EY M+D +ND E+A +LA+ ++ C +NLIP Sbjct: 234 YSIDKIIEACKIYTETTNR---RITFEYAMIDGLNDSKENALELAKRIRGMLCHVNLIPV 290 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 N + RSS +I F ++L +G T VR+ G DI+AACGQL ++++ Sbjct: 291 NTVSDTGFKRSSREKITAFKEILERFGVETTVRRELGSDINAACGQLRRNLVE 343 >UniRef50_C5CGV5 Radical SAM enzyme, Cfr family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGV5_KOSOT Length = 343 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 137/346 (39%), Positives = 201/346 (58%), Gaps = 18/346 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 + LL++ ++R+ D G + +RA Q+ W+Y NF MT++ K R L Sbjct: 1 MQLLEMTLDELRKVLVDEGYEKYRASQIFDWIYKKKVLNFSNMTNLPKDFRKFLS--GTF 58 Query: 78 RAPEVVEEQRSS---DGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCS 133 R PE+ +RS DGT K+ + D + +E+V + D T C+S+QVGC L C FC+ Sbjct: 59 RYPEMTIVRRSLSKIDGTEKFLWKLHDGEFIESVILRHPDHTTFCISTQVGCQLGCIFCA 118 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 T GF RNL VSEI+GQV K +G + +TN+V MGMGEP LN +NV ++E Sbjct: 119 TGMSGFKRNLSVSEIVGQVIFMEKSMG-------KNVTNIVFMGMGEPFLNTDNVFKSIE 171 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKY 252 I+ + G L R T+ST+G+ + +L D +DV L++SLHA DE R ++PINK+Y Sbjct: 172 ILHEPAGRNLGIRHFTISTAGIPEGIIRLADSGMDVRLSLSLHAATDEKRSMLMPINKRY 231 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 NI+ +A++ Y K+N R+TIEY+++D +ND E A QLA+L K +N+I N Sbjct: 232 NIQQLMASLEYYQRKTNR---RITIEYILIDGINDSIEDAKQLAKLFKHLKIFVNIIAIN 288 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P R S +++RF+ L +G +R +G DIDAACGQL Sbjct: 289 PVV-PTLKRPSREKVERFAIELKKHGIEAAIRTEKGSDIDAACGQL 333 >UniRef50_A9WFY6 Ribosomal RNA large subunit methyltransferase N n=4 Tax=Chloroflexi (class) RepID=RLMN_CHLAA Length = 376 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 140/355 (39%), Positives = 205/355 (57%), Gaps = 22/355 (6%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV--AEI 77 L D N ++ E + GE FRA Q+ + +Y D+MTD+ LR +L E+ + + Sbjct: 10 LYDYNLSELTELLQSWGEPAFRARQLYRHLYVNLARQVDQMTDLPLALRSRLAEIPFSTL 69 Query: 78 RAPEVVEEQRSSDGTIKWAI--AVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 R +V Q +G + A+ VETV + DR+T+CVS+Q GC + C FC+T Sbjct: 70 RCEQV---QIGDNGMTRKALFRLPDGAVVETVLMVYPDRSTVCVSTQAGCGMGCVFCATG 126 Query: 136 QQGFNRNLRVSEIIGQ-VWRAAKI--VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 Q G RNL EI+ Q +W + ++ +G A TG+ ++N+V MGMGEP N + A+ Sbjct: 127 QLGLLRNLSSGEIVAQAIWASQELRAMGMAGPTGR--VSNLVFMGMGEPFANYDRWWQAV 184 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 E + D GF L R +T+ST G+V +++L + + + LAISLHAP+D +R E++P+N++ Sbjct: 185 ERLHDPQGFNLGARSMTVSTVGLVKGIERLANERLPINLAISLHAPDDALRSELMPVNRR 244 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK------ 305 Y I +AA R Y+ K+ + RV+ EYV+L ND A LA LL+ + + Sbjct: 245 YPIADLMAATRNYIAKT---RRRVSFEYVLLQGKNDHPHQAIALARLLRHSAPRGPLLFH 301 Query: 306 INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 +NLIPWNP PG P GRS R+ F ++L YG VR RG +I AACGQLAG Sbjct: 302 VNLIPWNPVPGTPLGRSEWERVTTFQQILTDYGIPCTVRVERGVEIAAACGQLAG 356 >UniRef50_C0BG68 Radical SAM enzyme, Cfr family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG68_9BACT Length = 358 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 130/342 (38%), Positives = 201/342 (58%), Gaps = 8/342 (2%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 L++++++EFF G F+ QV +W++ +F+ MT+++ R L EI+ + Sbjct: 20 LSKEELQEFFVSQGAPSFKGGQVYQWLWQKGVHDFELMTNLSLTHRNLLDAHFEIKHINI 79 Query: 83 VEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 +QRS+DGTIK A+ + D V E+V IP R T CVSSQVGC+L+C FC+TA R Sbjct: 80 DFQQRSTDGTIKNAVKLHDNLVVESVLIPTSTRTTACVSSQVGCSLDCTFCATAALKRMR 139 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 NL EI QV + +K+ QRP++N+V MGMGEPL+N NNV+ A+E + D Sbjct: 140 NLNADEIYDQV---VAMDQQSKLYHQRPLSNIVFMGMGEPLMNYNNVLAAIEKITDTEAL 196 Query: 202 GLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 G+S RR+TLSTSG+ + K+ D + LA+SLH+ E+R+ I+P KK+ + + + Sbjct: 197 GMSPRRITLSTSGIPKLIRKMADDKVKFGLAVSLHSARQEVRERIMPFAKKFPLTELIES 256 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYG 320 + + + + ++T EYV+ + VND E L L + P K+N+I +NP G+ Sbjct: 257 LEYWYAYT---KKQITFEYVVWEGVNDLKEDIQALVGLCRRIPSKVNIIQYNPIDGSSMK 313 Query: 321 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 + + + ID + L + R++RG DIDAACGQLA + Sbjct: 314 QGNQTVIDAYIAALTKARISVTYRRSRGVDIDAACGQLANKI 355 >UniRef50_O80746 T13D8.12 protein n=9 Tax=Spermatophyta RepID=O80746_ARATH Length = 454 Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 141/347 (40%), Positives = 209/347 (60%), Gaps = 10/347 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFDEMTDINKVLRGKLKEV 74 K+ L + ++E+ + G +P +A + K +Y + +N DE+ +NK L+ + E Sbjct: 90 KVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEH 149 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPED-DRATLCVSSQVGCALECKFC 132 AE A + + +SDGT K + D V ETV IP D R T+CVSSQVGCA+ C+FC Sbjct: 150 AEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFC 209 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 T + G RNL +EI+ Q A +++ + ITNVV MGMGEP N++NV+ A Sbjct: 210 YTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGS----ITNVVFMGMGEPFHNIDNVIKAA 265 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKY 252 IM+D+ G S R+VT+STSG+VP L + + ALA+SL+A DE+R+ I+PIN+KY Sbjct: 266 NIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKY 325 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 + L +R L S+ ++ +V EYVML VND + A +L EL++ PCKINLI +N Sbjct: 326 KLSLLLETLREGL--SSRHKYKVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFN 383 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 P G+ + ++ ++ +F VL G T ++R +RG+D AACGQL Sbjct: 384 PHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLG 430 >UniRef50_A7HNQ1 Ribosomal RNA large subunit methyltransferase N n=11 Tax=Thermotogaceae RepID=RLMN_FERNB Length = 348 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 139/347 (40%), Positives = 204/347 (58%), Gaps = 18/347 (5%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+LD + +++ + F +G + FR DQV W+Y +FD+MT+++K R L E I Sbjct: 4 NILDFSYEELVDEFSKIGLEKFRVDQVWDWIYKKHEFDFDKMTNLSKEHRNTLSERFYIY 63 Query: 79 APEVVEEQRSS-DGTIK--WAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 PE+++ Q S D T K W + D +E+V + DR T C+S+QVGC +C FC+T Sbjct: 64 VPELLDMQISQIDKTTKFLWKLE-DDNTIESVLLFHPDRVTACISTQVGCPAKCAFCATG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q GF RNL EI+ Q+ K KV I N+V MGMGEPLLN VV +++++ Sbjct: 123 QSGFVRNLSAGEIVSQIIAMEK---HRKVN----IGNIVYMGMGEPLLNYKEVVKSVKML 175 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 G +S RR+++ST G+ + +L D+ +V LAISLHAPN+ RD IVP+NKKY++ Sbjct: 176 NHKKGKNISMRRISISTVGIPEKIVELAQDLPEVKLAISLHAPNNYKRDIIVPMNKKYSV 235 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E + + + Y + RVT EY+++ ND + A +LAELLK +NLIP NP Sbjct: 236 EEIIQSAKEY---QKITKNRVTFEYILIREFNDFVDDAEKLAELLKGMGAYVNLIPVNPV 292 Query: 315 PGA---PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P + + R + I+RF +VL + +R+ +G DIDAACGQL Sbjct: 293 PSSGELKFERPHHWAIERFKEVLDKHNIENEIRREKGTDIDAACGQL 339 >UniRef50_D1PM67 Radical SAM enzyme, Cfr family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM67_9FIRM Length = 345 Score = 243 bits (621), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 130/344 (37%), Positives = 201/344 (58%), Gaps = 12/344 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 KI L D ++ + LG+ FRA Q+ KW++ F +MTD K L L+E Sbjct: 3 KICLSDYTLAELTAYIVGLGQPKFRAKQIFKWLHQKLVTEFTQMTDQPKTLLAVLEEQCT 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I P + +Q+S DGT+K+ + + D +ETV + T+CVS+QVGCA+ C+FC++ Sbjct: 63 IAVPTIRRKQQSKDGTVKYLLQLADGNCIETVLMRYKYGNTVCVSTQVGCAMGCRFCAST 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q G R+L EI AA+I A K +G+R ++++V+MG+GEPL N +NV+ +EI+ Sbjct: 123 QAGRVRDLTAGEI------AAEIYTAQKDSGER-VSHIVLMGIGEPLHNFDNVMDFLEII 175 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 G + R ++LST G+VP +D+L + + L++SLHAP++ R ++P+N Y + Sbjct: 176 SCPEGVNIGMRNISLSTCGLVPKIDELAKRHLQLTLSVSLHAPDNVTRSGMMPVNDAYPL 235 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E + A RRY +++ R++ EY M+ VND +E A +LA L+ +NLIP NP Sbjct: 236 EELIPACRRYQKETGR---RISFEYSMVRGVNDSSEMAQKLARLIHGMGAHVNLIPINPV 292 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 G+PY + + + RF + L G VR+ G DI AACGQL Sbjct: 293 DGSPYSATDEANVRRFQQELEHLGVNATVRRRLGTDISAACGQL 336 >UniRef50_O66732 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Aquificales RepID=RLMN_AQUAE Length = 348 Score = 243 bits (621), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 141/356 (39%), Positives = 209/356 (58%), Gaps = 24/356 (6%) Query: 26 QQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEE 85 +++++ F +LG +P+RA QV +W+Y +F++MTD+ K R LKE E ++ Sbjct: 10 EELKKRFTELGLEPYRAKQVFRWVYKKFVTDFEKMTDLGKKHRELLKEHFAFHPLEKLDR 69 Query: 86 QRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLR 144 + D +K+ D + ETV I E D TLCVSSQ+GCA+ C FC+TA G RNL Sbjct: 70 VEAPDA-VKYLFKTKDGHILETVLIKERDHYTLCVSSQIGCAVGCTFCATALDGLKRNLS 128 Query: 145 VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLS 204 +EII Q + + +G K I NVV MGMGEPL N NV A+EIM+ G LS Sbjct: 129 TAEIIDQYLQVQQDLGEEK------IRNVVFMGMGEPLANYENVRKAVEIMVSPEGLDLS 182 Query: 205 KRRVTLSTSGVVPALDKLGD---MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAV 261 KRR+T+STSG+V + ++ M +V LA+SL+A + + R+E++P+ K +E + + Sbjct: 183 KRRITISTSGIVAQIKRMAQDPVMKEVNLAVSLNAVSQKKREELMPLTKTNTLEELMEVL 242 Query: 262 RRY-LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KDTPCKINLIPWNPFPGAP 318 + Y L K R+T+EYV++ VND A +LA+L+ K+NLIP+NP P P Sbjct: 243 KNYPLPKYR----RITLEYVLIKGVNDSPNDAERLAKLIGRHKKKFKVNLIPFNPDPNLP 298 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRM 374 Y R + + I +F KVL YG + VR ++G ++ ACGQL RT+R +R+ Sbjct: 299 YERPALTDIMKFQKVLWKYGISNFVRFSKGVEVFGACGQL------RTQRLQLQRV 348 >UniRef50_A9S1C9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S1C9_PHYPA Length = 433 Score = 243 bits (620), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 152/371 (40%), Positives = 219/371 (59%), Gaps = 18/371 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDE----MTDINKVLRGKLK 72 K++L D+ ++ + + G K RA M W + Y + E + +NK L+ Sbjct: 72 KVSLKDMTFPELERWVESHGHKASRA--AMLWRHLYGNGKWVESPAVIPRLNKEFVSLLE 129 Query: 73 EVAEIRAP--EVVEEQRSSDGTIKWAIAVGD--QRVETVYIP-EDDRATLCVSSQVGCAL 127 E AE AP ++ + + DGT K + + VETV IP R T+CVSSQ+GCA+ Sbjct: 130 ERAEF-APNLQLRDVHTARDGTRKLVFFLEEYGASVETVVIPGPRGRVTVCVSSQIGCAM 188 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C+FC TA+ G NL ++I+ Q+ A++IV +K G +TNVV MGMGEPL N+++ Sbjct: 189 NCQFCFTAKMGLRGNLSTAQIVEQLVVASRIV--SKDLGH--VTNVVFMGMGEPLHNIDS 244 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVP 247 V+ A EIM++D G LS R+VT+STSG+VP + K + ALA+SL+A D+IRD+I+P Sbjct: 245 VIRAAEIMVNDKGLHLSPRKVTISTSGLVPQIRKFCRSSECALAVSLNATTDDIRDQIMP 304 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 IN+KYNI T L V+ + + V +EYVML +VND E A +L EL+KD PCKIN Sbjct: 305 INRKYNIRTLLDCVKEEMITHRPGES-VFLEYVMLKNVNDSEEDATRLIELVKDIPCKIN 363 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 LI +N PG+ + + + RF + G +R +RGDD ACGQL G V+ R+ Sbjct: 364 LIMFNSHPGSAFEPTPLVEVLRFRDRVADAGLVVHIRNSRGDDEKMACGQL-GTVLPRSP 422 Query: 368 RTLRKRMQGEA 378 R ++ MQ A Sbjct: 423 RRRKQEMQEPA 433 >UniRef50_B9KXX2 Radical SAM enzyme, Cfr family n=2 Tax=Thermomicrobia (class) RepID=B9KXX2_THERP Length = 379 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 139/344 (40%), Positives = 198/344 (57%), Gaps = 11/344 (3%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 L D ++ + + G +RA Q+ W Y ++ M+ + K +R +L E I Sbjct: 28 TLHDYTLGELEAWVEGRGLPRYRARQLFHWAYQQLVLEYESMSVLPKAVRSELSETLPIS 87 Query: 79 APEVVEEQRSSD-GTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 V ++ S D TIK D VETV + DR T+CVS Q+GCA+ C FC+T Sbjct: 88 GLVPVRQRVSDDRETIKLLFRTRDDHFVETVVMFYPDRTTVCVSCQIGCAIGCSFCATGL 147 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL E++ QV AA++ + I+N+V+MGMGEP N + V+ + I+ Sbjct: 148 SGLIRNLSAGEMVSQVVHAARLARERERR----ISNIVVMGMGEPFHNYDAVMRFVAIVN 203 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D G G+ R +TLST+GVVP +D+L + V LA+SLHAPND +R ++VPIN+++ I+ Sbjct: 204 DRQGLGIGARHITLSTAGVVPFIDRLAEEPYQVKLAVSLHAPNDALRSQLVPINRRWPID 263 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 LAA RRY+ ++ RVT EYV+++ VND A +LA L+ C +NLIP+NP P Sbjct: 264 ELLAACRRYVARTGR---RVTFEYVLIEDVNDDERTAAELARRLRGLLCHVNLIPYNPTP 320 Query: 316 GAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 AP + R RI+RF VL YG VR +RG +I AACGQL Sbjct: 321 AAPLFRRPGPERIERFRAVLERYGIPATVRYSRGVEIAAACGQL 364 >UniRef50_Q3ASD4 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=RLMN_CHLCH Length = 366 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 133/363 (36%), Positives = 203/363 (55%), Gaps = 19/363 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 INL+DL ++ GE PFRA Q+ +W++ + ++F M+ + LR KL E + Sbjct: 14 INLVDLRYNELHNAITAFGEPPFRAKQIHEWLFSHHANSFAAMSSLPLRLREKLAERFTL 73 Query: 78 RAPEVVEEQRSSDG-----TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKF 131 + PEVVE Q S + T K + + D +E V IP ++R T C+SSQ GC ++C F Sbjct: 74 QRPEVVEVQESCESGCLRPTRKILLKLSDGALIECVLIPAEERMTACLSSQAGCPMQCTF 133 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+T G RNL G++W + + + ITNVV MGMGEPLLN +NV+ A Sbjct: 134 CATGTMGLQRNLSA----GEIWEQLYALNGLALQEGKTITNVVFMGMGEPLLNTDNVLEA 189 Query: 192 MEIMLD-DFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 + M ++ LS+R++T+ST G+VP +++L + LA+SLH+ E+R +++PI Sbjct: 190 IATMSSRNYNLSLSQRKITISTVGIVPEIERLSRSGLKTKLAVSLHSARQEVRQQLMPIA 249 Query: 250 -KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 ++Y + ++ Y S A +TI Y+ML+ VND E AH LA + CKINL Sbjct: 250 AERYPLPLLSKSLEAY---SKATGEAITIVYMMLNGVNDSKEDAHLLARYCRHFSCKINL 306 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 I +NP +G S+ + F LM+ F VRK+ G ++AACGQL V + +R Sbjct: 307 IDYNPILTIRFGSVQESQKNEFQAYLMAQKFHVTVRKSYGASVNAACGQL---VTQQQRR 363 Query: 369 TLR 371 T++ Sbjct: 364 TIK 366 >UniRef50_Q01QF9 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Acidobacteria RepID=RLMN_SOLUE Length = 356 Score = 240 bits (613), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 195/325 (60%), Gaps = 9/325 (2%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV 99 +RA Q+ + +Y N +++ + LR L E+ PE+ +S+DGT ++ + + Sbjct: 38 YRAKQIYEAIYRGQAANLVQISTLPAQLREDLAARHEVGLPEIAHLYQSTDGTRRYLLKL 97 Query: 100 GDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKI 158 D R VETV +P+ +R T+C+SSQVGC ++CKFC TA G R+L EI+GQV A+ Sbjct: 98 EDGRTVETVLMPDGERDTICISSQVGCPVDCKFCMTALMGLERSLTAGEIVGQVLLVARE 157 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA 218 + G+ N+VMMG GEPLLNL NVV A I+LD GFGLS RRVT+ST+G++P Sbjct: 158 NQLRQDGGR---LNIVMMGQGEPLLNLENVVKATRILLDPAGFGLSPRRVTVSTAGIIPK 214 Query: 219 LDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTI 277 + +LG + + LAISL+A +E R E++PI +KY+++ LAA + Y + ++T Sbjct: 215 IAELGREPVRPKLAISLNASTEESRQELMPITRKYHLKDLLAACKAYPLRP---WEKLTF 271 Query: 278 EYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSY 337 EYV+L VND A ++ +LL + K+NLI NP PG PY R+ F + + Sbjct: 272 EYVLLRGVNDTDADARRVVKLLSNLNAKVNLIALNPGPGIPYATPDPERVASFQNI-VRR 330 Query: 338 GFTTIVRKTRGDDIDAACGQLAGDV 362 VRK RG DI AACGQL +V Sbjct: 331 ALPCFVRKPRGLDIYAACGQLKRNV 355 >UniRef50_A5D1B6 Ribosomal RNA large subunit methyltransferase N n=13 Tax=Clostridia RepID=RLMN_PELTS Length = 368 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 133/346 (38%), Positives = 202/346 (58%), Gaps = 14/346 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +IN+ DL + +G + +RA QV W++ ++F EMT++ LR KL A Sbjct: 18 RINVKDLTLAGLERLLTGMGAERYRAGQVAIWVFQKGAESFREMTNLPANLREKLDAAAV 77 Query: 77 IRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I PE++ ++ SS +K+ + D Q VE+V++ ++CVS+Q GC + C+FC++ Sbjct: 78 ISRPEILAKKVSSKKDAVKYLFGLPDGQAVESVFMKHAYGNSVCVSTQAGCRMGCRFCAS 137 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 A G RNL EI QV +G + TG+R I++VV+MG GEPL N + + ++ Sbjct: 138 ALGGLTRNLSPGEIYDQV------LGIRRDTGER-ISSVVLMGSGEPLDNYDATLTFIKN 190 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYN 253 + +G + R +T+ST G+VP + +L + + + LA+SLHAPND +RD +VP+N+KY Sbjct: 191 VTAPYGLHIGCRHITVSTCGLVPGIRRLAREKLALTLAVSLHAPNDRLRDILVPVNRKYP 250 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-DTPCKINLIPWN 312 + +AA R Y +++ RVT EY +L VND EHA +L LLK PC +NLIP N Sbjct: 251 LTELMAACRDYAQETGR---RVTFEYALLAGVNDRKEHAEELVRLLKGKMPCHVNLIPAN 307 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P P S +++ F K+L +G VR+ G DIDAACGQL Sbjct: 308 PVPERGVKTPSRLQVELFKKILERHGLAVTVRRGLGADIDAACGQL 353 >UniRef50_Q2RK16 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RLMN_MOOTA Length = 354 Score = 239 bits (611), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 138/350 (39%), Positives = 201/350 (57%), Gaps = 15/350 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +I+L L Q++ E LGE P+R Q+ +W++ + M+D+ + R +L VAE Sbjct: 4 RIDLRGLLPQELEELAVRLGEAPYRGRQIFRWLHARRAKGIEVMSDLPRAFRERLALVAE 63 Query: 77 IRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDD---RATLCVSSQVGCALECKF 131 + V+ ++DG T K + +GD +E V + D R T C+SSQVGCA+ C F Sbjct: 64 LPPVRVLNRLVAADGLTRKLLLGLGDGNSIECVLMIYKDGRRRNTACLSSQVGCAMGCSF 123 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGA--AKVTGQRPITNVVMMGMGEPLLNLNNVV 189 C+T Q G RNL SEII Q A +GA A+ G I+N+V MGMGEPL N V+ Sbjct: 124 CATGQGGLQRNLTASEIILQ----ALALGAELAEGEGGNRISNIVFMGMGEPLNNYEAVM 179 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPI 248 + I D G+G+S RR+TLST G+VP +++L + + LA+SLHA +E+RD+++PI Sbjct: 180 KGVRIFEDPSGWGISHRRITLSTCGIVPGIERLAREKPPLELAVSLHAVTNELRDKLMPI 239 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 N++Y +E + A RRY E + RVT EY ++ VND E A L+ LL+D +N+ Sbjct: 240 NRRYPLEELIPACRRYAEITGR---RVTFEYALIAGVNDRREDARGLSRLLRDMLAFVNI 296 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 IP NP G+ + + F +L G +R +RG DI AACGQL Sbjct: 297 IPLNPVAGSGFKGVPPAAARAFVALLQEAGLEAAIRDSRGQDIAAACGQL 346 >UniRef50_D1B0V3 Radical SAM enzyme, Cfr family n=10 Tax=Campylobacterales RepID=D1B0V3_SULD5 Length = 358 Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 136/357 (38%), Positives = 202/357 (56%), Gaps = 26/357 (7%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K N+ DL+++++ E K FRA Q+ +W+Y +FDEM ++ K L+ +L E Sbjct: 3 KENIFDLSKEELSEVIK----PAFRAKQIYQWLYQKYVTSFDEMKNLPKELKEQLNETYY 58 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIP-------------EDDRATLCVSSQ 122 + +V + S DG+ K+ A+ D Q VE V +P R T+C+SSQ Sbjct: 59 LDPLRIVTIEESCDGSKKYLFALKDNQTVEAVLLPMKQEQVDEEGKLVHHARYTICISSQ 118 Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL 182 VGC + C FC T + GF RNL EI QV ++ + N+V MGMGEPL Sbjct: 119 VGCKIGCAFCLTGKSGFKRNLTAGEITTQVL----MIKRDNAIAENRRVNIVYMGMGEPL 174 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEI 241 NL NV A+ I D G +S RR T+STSG+ ++KLG M + + LAISLHA +D++ Sbjct: 175 DNLTNVSKAVRIFSDLDGLSISPRRQTISTSGLSSQIEKLGKMDLGILLAISLHAVDDDL 234 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 R +++PINK YNIE+ + AVR + + + RV EY+++ VND + A +L +LL Sbjct: 235 RQKLMPINKAYNIESIMNAVRGFPIDA---RKRVMFEYLVMKGVNDDQKSAKKLVKLLHG 291 Query: 302 TPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 K+NLI +NP G+ + R S + F + L+ +G +R+++G DI AACGQL Sbjct: 292 IKAKVNLIYFNPHAGSDFDRPSTKDMIAFQQYLVDHGVLCTIRQSKGLDISAACGQL 348 >UniRef50_B0TGT1 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Heliobacteriaceae RepID=RLMN_HELMI Length = 385 Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 137/373 (36%), Positives = 205/373 (54%), Gaps = 30/373 (8%) Query: 4 QLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDI 63 Q + PE + +L L +++ G+ FR Q+ KW+ + EMTD+ Sbjct: 19 QRIEPEGEEQSEQPTDLRGLFPEEIAALLTPWGQPTFRGKQIFKWLQNRAVREVAEMTDL 78 Query: 64 NKVLRGKLKEVAEIRAPEVVEEQR-SSDGTIK--WAIAVGDQRVETVYIP-----EDDRA 115 + LR +L E ++ P E R + DGT K W +A G+ +E+V +P DR Sbjct: 79 PQALRVRLGEAGWLK-PLAPERHRVARDGTEKYLWRLADGEL-IESVLMPYRRAQTRDRV 136 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR------- 168 T+C+S+Q GC L C+FC+T +QGF RNL +EI+GQV +T ++ Sbjct: 137 TVCLSTQAGCPLSCRFCATGRQGFRRNLTAAEIVGQV---------LDITHEKRKDDPDF 187 Query: 169 PITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-ID 227 +TN+V MGMGEP LN +NV A+ + G + +RR+T+ST+G+VP +D+ D + Sbjct: 188 KVTNLVFMGMGEPFLNYDNVRRAIGLFTHPEGQAIGQRRITVSTAGIVPGIDRFADEDWE 247 Query: 228 VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVND 287 V LA+SLHA +D+ R E +P+N ++ + L A RRY EK+ R+++EY ++ VND Sbjct: 248 VNLALSLHAADDKQRSEWMPVNDRFPLAQVLEACRRYWEKTRR---RLSVEYALMAGVND 304 Query: 288 GTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTR 347 E A +LA L K P +NLIP N G R +RF L +G ++R+ R Sbjct: 305 RLEDARRLASLFKGWPIHLNLIPVNAVAGIGVRRPEREPTERFLAELRRWGVDAVIREER 364 Query: 348 GDDIDAACGQLAG 360 G DI+AACGQL G Sbjct: 365 GQDIEAACGQLRG 377 >UniRef50_A9KM95 Ribosomal RNA large subunit methyltransferase N n=67 Tax=Bacteria RepID=RLMN_CLOPH Length = 356 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 128/353 (36%), Positives = 204/353 (57%), Gaps = 13/353 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 KI++ L ++++ K +GEK FRA Q+ +W++ +F+EMT+++K LR KL E Sbjct: 7 KIDIKALTLEELKASLKIIGEKEFRAKQIYEWLHVKLVRDFEEMTNLSKELRAKLASEYE 66 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 + +E S DGT+K+ + D V E V + ++C+SSQVGC + C+FC++ Sbjct: 67 LICVNDLERYESKMDGTVKYLFRLSDGNVVECVLMKYHHGNSVCISSQVGCRMGCRFCAS 126 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNL+ SE++ +V++ ++ +G+R ++N+V+MG GEP+ N +N V + + Sbjct: 127 TLGGLTRNLKTSEMLDEVYQIQRL------SGER-VSNIVIMGTGEPMDNYDNFVKFIRM 179 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + G +S+R +T+ST G+VP + L + + LA+SLHAPNDE R +I+P+ Y Sbjct: 180 ISSSDGLNISQRNITVSTCGIVPKMRALAEEGFAITLALSLHAPNDEERAKIMPVANSYQ 239 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 ++ L A Y EK+ RV+ EY ++D VND A +L+ LLK C +NLIP NP Sbjct: 240 LQDVLNACDYYYEKTGR---RVSYEYSLVDGVNDTAACAKELSRLLKGKNCHVNLIPVNP 296 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 Y RS+ + I F +L +R+ G DI+AACGQL D+T Sbjct: 297 IKERDYKRSTGNNIQNFKNILEKNRINVTIRREMGSDINAACGQLRKSYTDKT 349 >UniRef50_A7ZGB0 Ribosomal RNA large subunit methyltransferase N n=41 Tax=Epsilonproteobacteria RepID=RLMN_CAMC1 Length = 381 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 143/356 (40%), Positives = 210/356 (58%), Gaps = 28/356 (7%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 NLLDL+ ++++E L FRA Q+ +W+Y F +M ++ K +R L E + Sbjct: 3 NLLDLSIEELKE----LVSPSFRATQIYEWVYKKNATEFSQMLNLPKDMRQDLAEKFYLD 58 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIP-------EDD------RATLCVSSQVG 124 + V+ ++SSDG+IK+ + D ++E+V +P ED R T+CVSSQVG Sbjct: 59 PLKCVKFEQSSDGSIKYLFELKDGLKIESVLLPMKEEISDEDGKISRHARYTICVSSQVG 118 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQV-WRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 C + C FC TA+ G RNL EI+GQ+ W I K+ +R I NVV MGMGEPL Sbjct: 119 CKMGCAFCLTAKGGLVRNLTAGEIVGQILW----IKRENKIPYERRI-NVVYMGMGEPLD 173 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIR 242 NL NV A++I+ + G +S RR T+STSG+ + KLG+M + V LAISLHA +E+R Sbjct: 174 NLTNVSKAIKILALNEGLAISPRRQTVSTSGLGSQIKKLGEMDLGVLLAISLHAVTNELR 233 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 ++PINK YNIE + AVR + + RV EY+++ +ND A +L +LL Sbjct: 234 SRLMPINKAYNIEAVMDAVRGF---PIDMRKRVMFEYLVIKDLNDSVSDAKKLVKLLHGI 290 Query: 303 PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 K+NLI +NP G+ +GR + + +F + L +G T +R+++G DI AACGQL Sbjct: 291 KAKVNLIYFNPHEGSEFGRPELASMLKFQEYLRDHGVTCTIRQSKGLDISAACGQL 346 >UniRef50_B1H070 Ribosomal RNA large subunit methyltransferase N n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RLMN_UNCTG Length = 350 Score = 237 bits (604), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 125/348 (35%), Positives = 208/348 (59%), Gaps = 18/348 (5%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 +LDLN Q K + E+ +R +Q+++W+Y +F+ T+I K LR KL E +R Sbjct: 12 ILDLNDAQFNRAVKPIIEQDYRINQIIEWIYAKKAVSFESFTNIPKELRNKLDEKFFLRT 71 Query: 80 PEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 ++V++++S D TI++ D++ V++P + + ++C+SSQ+GC + C FCS+ + Sbjct: 72 LKIVKKEKSLIDSTIRYTFRTADKKYFFAVFLPANGKNSVCISSQIGCPIMCAFCSSGKT 131 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 RNL EII Q+ + + I+ ++ MGMGEP+LN NN++ + +L Sbjct: 132 KLARNLSRGEIIEQILQVEN-------DTKEKISGILFMGMGEPMLNFNNLISVLNSLLS 184 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 FG+ KR +T+S+ G+VPA+ KL D V LA+SLHA ++ R ++VP N ++IE Sbjct: 185 SKEFGIGKRHITVSSVGIVPAVKKLADDNFGVRLALSLHAVDERQRKKLVPDNLGFSIED 244 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-----DTPCKINLIPW 311 L A + YL+K+N++ +TIEYV++ +N + AH+LA LLK ++ ++NLIP+ Sbjct: 245 ILKAGKYYLKKTNSH---LTIEYVLVKGINISSADAHKLARLLKRCDLINSDVQVNLIPF 301 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 NP + R I++F +L G T VR+++G +I+AACGQL Sbjct: 302 NPVTDVQFQRPDKKSINKFKSILKLNGITVNVRQSKGANINAACGQLG 349 >UniRef50_B2RMI0 Ribosomal RNA large subunit methyltransferase N n=36 Tax=Bacteroidales RepID=RLMN_PORG3 Length = 352 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 131/349 (37%), Positives = 204/349 (58%), Gaps = 14/349 (4%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 T + K+ LL ++ +++ +G F Q+ +W+Y +F EMT+I++ R KL Sbjct: 5 TETEKKVVLLGMSLEELTTVALRMGMPRFAGKQLAEWIYVRRATDFAEMTNISQANRQKL 64 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 E+ ++ + Q S DGT K+ VG+ R VE+V IPE DRATLC+SSQVGC ++C Sbjct: 65 AEIYDLGRYPWSDVQCSVDGTKKYLFPVGEGRFVESVLIPEGDRATLCISSQVGCKMDCL 124 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC T +QG+N NL +EI+ Q++ V +TN+V MGMGEPL N + V+ Sbjct: 125 FCMTGKQGWNGNLSAAEILNQIF---------SVDEAAELTNLVYMGMGEPLDNTDEVLR 175 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINK 250 ++E + + +G G S +R+T+ST G L++ LA+SLH+P E R +++P K Sbjct: 176 SIEALTEPWGMGWSPKRITVSTIGA-KGLERFLAESRCHLAVSLHSPFPEERRKLMPGEK 234 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 + I L +R Y + Q RV+ EY++ D +ND HA +LA +L+ PC+INLI Sbjct: 235 AFPIMQTLDRIRAY---DFSGQRRVSFEYIVFDGLNDDMRHADELAAILRGIPCRINLIR 291 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 ++ P S +R++ F K + S+G+T +R +RG+DI AACG L+ Sbjct: 292 FHKIPAVSLRSSDTARMEAFRKRMESHGYTCTIRASRGEDIFAACGMLS 340 >UniRef50_Q8RFZ9 Ribosomal RNA large subunit methyltransferase N n=15 Tax=Fusobacterium RepID=RLMN_FUSNN Length = 358 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 136/355 (38%), Positives = 213/355 (60%), Gaps = 17/355 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 K+ KIN+L+L ++++ E LG K F +V W++ +FDEMT+++ R LKE Sbjct: 2 KNEKINILNLTQEELTELLVSLGLKKFYGKEVFIWLHKKITRSFDEMTNLSLKDREILKE 61 Query: 74 VAEIRAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIPEDD------RATLCVSSQVGC 125 I +++ Q S D T K+ + D +ETV + D R TLCVSSQVGC Sbjct: 62 KTYIPFFNLLKYQVSKIDKTEKFLFELEDGGTIETVLLRHKDSKNKEIRNTLCVSSQVGC 121 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 ++C FC+T Q G+ RNL VSEI+ Q++ + + G+ + N+V MGMGEPLLN+ Sbjct: 122 PVKCSFCATGQSGYMRNLSVSEILNQIYTVER---RLRKKGEN-LNNLVFMGMGEPLLNI 177 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDK-LGDMIDVALAISLHAPNDEIRDE 244 +N+ A+ I+ ++ G +SKR++T+STSGVV ++K L D I + LAISLH+ +E RD+ Sbjct: 178 DNLSKALSIISNENGINISKRKITISTSGVVSGIEKILLDKIPIELAISLHSAINEKRDK 237 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 I+PINK + +E A + Y +++ + R+T EY+++D+ N A+ LA+ + Sbjct: 238 IIPINKNFPLEDLSAVLIEYQKQT---KRRITFEYILIDNFNISETDANALADFIHQFDH 294 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTI-VRKTRGDDIDAACGQL 358 +NLIP+N GA + R S +I++F L + + +R+ +G DID ACGQL Sbjct: 295 VVNLIPYNEVEGAEHTRPSVKKINKFYIYLKNVRKVNVTLRQEKGSDIDGACGQL 349 >UniRef50_D2RNU4 Radical SAM enzyme, Cfr family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RNU4_ACIFE Length = 353 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 134/356 (37%), Positives = 205/356 (57%), Gaps = 12/356 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L ++++ LG K FRA+QV +W+Y +F +M++++K R +L + Sbjct: 3 KKEIMGLTLEELQTELAGLGMKKFRAEQVFRWLYEKAATDFSQMSNLSKDARQQLADRYT 62 Query: 77 IRAPEV--VEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFC 132 I +V ++E RS DG T K + + D VETV + D ++C+SSQVGCA+ C FC Sbjct: 63 IATAQVKVLKEYRSRDGLTHKVLLELTDGATVETVLMHHDYGYSVCLSSQVGCAMNCAFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL +EI+ Q++ + G ++ +V+MG GEP+LNL+NV+ A+ Sbjct: 123 ASGLHGFVRNLTAAEILAQLY----FFQSGLQPGGERVSRIVVMGSGEPMLNLDNVLKAL 178 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKK 251 +I+ D G + R +T+ST GVVP + +L ++ LAISLH + E+R+ ++PIN+K Sbjct: 179 DILHSDRGQCIGYRNMTVSTCGVVPGIQELTAQGRNINLAISLHGASQELRNRLMPINRK 238 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + A Y EKSN Q V EY++L +ND E A LA+ L+ C INLIP Sbjct: 239 YPFPEVIQAADAY-EKSNGRQ--VMYEYILLAGINDRPEDARNLADALEHKECVINLIPA 295 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 NP P + R S+ +DRF ++L VRK G DI+AACGQL + + Sbjct: 296 NPVPEKGFERPSDRAVDRFFQMLKKRRLNVTVRKEMGKDINAACGQLRASALKEAQ 351 >UniRef50_Q1Q215 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q215_9BACT Length = 368 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 127/363 (34%), Positives = 198/363 (54%), Gaps = 18/363 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ +L+ + E + LGE +R Q++ WMY +F++M+DI R KL+E + Sbjct: 8 SITELDLSESVELCRSLGEPSYRGKQILSWMYKKGATDFNQMSDIPLPFREKLEEAHNVF 67 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 ++ S DGT K+ I + D +E V + + R T CVS+QVGCA+ C FC++ Sbjct: 68 QTKIHTINTSQDGTEKFLIHLPDNNLIECVLLRDGKRRTACVSTQVGCAMGCSFCASGVL 127 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G RNL+ EII QV + A ITN+V MG+GEPL N + VV ++ IM Sbjct: 128 GLTRNLKTGEIIEQVLHIKNHLPA-----NEHITNIVFMGIGEPLANYDKVVKSLRIMNA 182 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 D+G + R +T+ST G++ + +L + + V LAISLHA ND R+++VP N K I+ Sbjct: 183 DWGLAIGARNITISTVGLIEGIRRLAKEGLKVNLAISLHASNDNTRNKLVPSNSKTGIKN 242 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A + Y NA ++ EY M+D +ND + A LA++LK C +N++P NP Sbjct: 243 ILGAAQEYF---NATHRDISFEYTMIDGINDSKQDAKLLAQILKGVQCNVNILPVNPIKE 299 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQG 376 + ++ F VL ++G VR+ +G +++AACGQL + ++K G Sbjct: 300 GNFAPPVQKTVETFCTVLKNHGIVATVRQRKGINVNAACGQL--------RLQIQKHCHG 351 Query: 377 EAI 379 E I Sbjct: 352 EKI 354 >UniRef50_B9XSY7 Radical SAM enzyme, Cfr family n=1 Tax=bacterium Ellin514 RepID=B9XSY7_9BACT Length = 378 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 131/358 (36%), Positives = 204/358 (56%), Gaps = 28/358 (7%) Query: 26 QQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEE 85 ++++ FK+L + +R Q+++W+Y + ++D MT++ K LR L++ ++ E+V Sbjct: 11 EELQARFKELNQPGYRVGQLLEWLYVHRVASWDAMTNLPKGLREVLQKEFTLQTLELVRR 70 Query: 86 QRSSDGTIKWAIAVGD-QRVETVYIPED--------DRATLCVSSQVGCALECKFCSTAQ 136 Q S D T K+ + D +E+V IP + DR TLCVS+QVGCA CKFC++ Sbjct: 71 QGSRDTTQKFLWKLNDGAMIESVLIPANPALYGEASDRHTLCVSTQVGCAYGCKFCASGL 130 Query: 137 QGFNRNLRVSEIIGQV-----WRAAKIVGAAKVTGQRP----------ITNVVMMGMGEP 181 +G+ RNLRV EI+ Q+ W AA+ +K P I N+V+MGMGEP Sbjct: 131 EGWKRNLRVEEIVEQILAIERWNAAEEAKGSKPPEANPKPKTTEVTRFINNLVIMGMGEP 190 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDE 240 L N N++ A+ I+ +G G+ R++T+STSG+ P + KL D + LAISLH DE Sbjct: 191 LANYENLLKALRILNAPWGGGIGARKITISTSGLAPQIRKLADDPLQFRLAISLHGATDE 250 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 +R++I+P+NKKY ++ AA Y +K + +T EY+++ VNDG + LA+L Sbjct: 251 VRNKIMPVNKKYPLKELTAACEYYQQKKDR---MITFEYILIAGVNDGLDQVKPLAQLAH 307 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 K+NLIP+N + R + + + F L +R+ +G DIDAACGQL Sbjct: 308 RLNAKVNLIPYNKVEDLTWERPTEAAQEAFLATLEKERVVATLRREKGHDIDAACGQL 365 >UniRef50_D1BMC5 Radical SAM enzyme, Cfr family n=3 Tax=Veillonella RepID=D1BMC5_VEIPT Length = 348 Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 137/345 (39%), Positives = 202/345 (58%), Gaps = 14/345 (4%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 I LL + ++++ FK + FRA Q+ ++YH +F++MT K LR L + I Sbjct: 2 IELLGKSLEELQSIFKTHNIQKFRAKQLFDYIYHRYIFDFEDMTQFPKDLRQWLNDNCVI 61 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 P ++ E + DG T K + + DQ RVE V + + ++CVSSQVGCA+ C FC++ Sbjct: 62 SLPTLITESIAPDGKTRKILVEMTDQSRVEAVLMEQHYGYSVCVSSQVGCAMGCVFCAST 121 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q G R+L V+EIIGQV I GA + I +VV+MG GEPL N +NV+ A++++ Sbjct: 122 QGGLYRDLTVAEIIGQV----VIFGALT---KEEIHSVVVMGAGEPLQNYDNVLQALQLL 174 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D +S R++T+ST G VP + KL D + + LA+SLHA N+E+R I+P+ +Y + Sbjct: 175 HDPMICNISYRKMTISTCGWVPNIYKLADEALPITLALSLHATNNEVRRSIMPVGARYEL 234 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNP 313 L AV+ Y N Q RVT EY+++D VN + AH L ++ KD P C +NLIP N Sbjct: 235 TEVLDAVKYYY---NTTQRRVTFEYILIDSVNASMDEAHALGKICKDFPNCHVNLIPVNG 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + S + ++ F ++ SYG + VRK GD I AACGQL Sbjct: 292 NEHIELYKPSITNMNTFKDIVSSYGVSVTVRKEMGDAIQAACGQL 336 >UniRef50_B3QS43 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RLMN_CHLT3 Length = 369 Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 130/346 (37%), Positives = 201/346 (58%), Gaps = 15/346 (4%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE---VAEIR- 78 L+ + + G+ FRA Q+ W+Y + +F +M +++ + L + V+ I+ Sbjct: 11 LSLEALMALINSYGQPAFRAKQIFHWIYAHGVTDFAQMKNLSASFQTLLSQHFTVSSIQP 70 Query: 79 APEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDD--RATLCVSSQVGCALECKFCSTA 135 + V + + + T+K+ + D Q +E+V+IP D R TLC+SSQVGCA CKFC+T Sbjct: 71 HADTVSHEITPEQTVKFLFRLSDEQSIESVFIPSDSTSRNTLCISSQVGCAFACKFCATG 130 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 GF RNL + EI+ QV + +G + G + ITNVV MGMGEPL N +N + A+ I+ Sbjct: 131 YMGFIRNLTIGEILDQVLWVNRWLGDQR--GGK-ITNVVFMGMGEPLANFDNCLAAIRIL 187 Query: 196 LD-DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + D+ F +S R++T+ST G +P + +L D I+ LAISLH+ + IR+E++PI K+Y+ Sbjct: 188 TNPDYAFQISTRKITVSTVGFIPGIQRLIDTGINCKLAISLHSAHQAIREELIPIAKEYS 247 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + T A + RY + A + +T EY ++ +ND + A L++ K CKINLI +N Sbjct: 248 LATLKAILTRY---NQAYKQPITFEYSLIHKINDSEQDAILLSKFCKGINCKINLIDYNS 304 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 Y S F + + +G T VRK+RG DI AACGQLA Sbjct: 305 VDNIDYLPSPEGHKQAFIRKCIEHGLTVTVRKSRGADIQAACGQLA 350 >UniRef50_C5EIZ2 Radical SAM enzyme n=11 Tax=Clostridiales RepID=C5EIZ2_9FIRM Length = 354 Score = 233 bits (595), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 128/359 (35%), Positives = 205/359 (57%), Gaps = 13/359 (3%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 ++T G+ ++ + +++ E LGEKPFRA Q+ W++ +FD M+ ++K LR Sbjct: 3 DLTDNKGRKDIKSMTLEEVTEEMAALGEKPFRAKQIYDWIHVKLAGSFDGMSSLSKELRQ 62 Query: 70 KLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCAL 127 KLK+ + + EE+ S DGT K+ + D + E+V++ ++C+SSQVGC + Sbjct: 63 KLKDNYSLTCLSITEERISQVDGTRKYLFCLEDGNIIESVWMQYHHGNSVCISSQVGCRM 122 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C+FC++ G RNLR SE++ Q++R TGQR ++NVV+MG GEP N +N Sbjct: 123 GCRFCASTLDGLERNLRPSEMLDQIYRIQA------HTGQR-VSNVVVMGSGEPFDNYDN 175 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIV 246 V+ + ++ + G +S+R +T+ST G+VP + + + + V LA+SLHAPNDE+R ++ Sbjct: 176 VIRFLRLISHEKGLNISQRNLTVSTCGIVPGILQFAQEGLAVTLALSLHAPNDEVRKTLM 235 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 PI +Y ++ L A Y EK+ R+T EY ++ VND + A L+ L+KD + Sbjct: 236 PIANRYKLKDVLEACHYYYEKTGR---RLTFEYSLVQGVNDNLDEARALSRLIKDQHGHV 292 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 NLIP NP Y +S I F +L G +R+ G DI ACGQL +++ Sbjct: 293 NLIPVNPIKERDYVQSGRKAIADFKDLLEKNGINVTIRREMGRDIGGACGQLRKSYMEK 351 >UniRef50_Q3AC22 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RLMN_CARHZ Length = 342 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 126/348 (36%), Positives = 205/348 (58%), Gaps = 13/348 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 LDLN +++ + K+ EK FR Q+ +W++ + +F++MT++ LR KLKE + + Sbjct: 4 FLDLNSEEIVAWLKENNEKSFRLKQINEWIFKHGELDFNKMTNLPVRLREKLKENFLLPS 63 Query: 80 PEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 +++ ++S DG +IK+ + + D +E V + T+C+S+QVGC + CKFC+T Sbjct: 64 LKIIHSKKSRDGQSIKYLLKLKDNLGIEAVLLKYRYGNTVCLSTQVGCKMGCKFCATGLG 123 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF+RNL E+I Q+ K + IT VV+MG GEPL N V+ M + + Sbjct: 124 GFSRNLTAGEMIEQIL-------VLKASSSEKITRVVLMGSGEPLDNFTEVLKFMRKINE 176 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 +S R++T+ST G+VP + L + + V LAISLHAP+D +R+E++PINK++ + Sbjct: 177 KDCLNISYRKITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAE 236 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A +++K+ RV+ EY ++++VND EHA +LA+LL+ +NLIP+N Sbjct: 237 LLDAAWYFIDKTGR---RVSFEYALIENVNDTVEHALKLAQLLQRKLVHVNLIPYNTIEK 293 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 + S +I++F +VL G VR+ GD+ID ACGQL + Sbjct: 294 RNFKTPSVEKINKFKEVLKRAGIPVTVRRELGDEIDGACGQLKAKYFE 341 >UniRef50_Q0F2U6 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2U6_9PROT Length = 364 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 136/352 (38%), Positives = 198/352 (56%), Gaps = 21/352 (5%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCD----NFDEMTDINKVLRGKLKEVAEIR 78 LN ++ + + FRA QV+ W C+ N M +I LR +L Sbjct: 18 LNLSDLQGLMEAWMQPKFRAKQVLDW-----CNKGILNPALMKNIPDALRDRLLTSLMCE 72 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-----VETVYIPEDDRATLCVSSQVGCALECKFCS 133 ++ + S+DGT K+ A+ R +E V+IPE+ R T+C+SSQVGC L+C FC Sbjct: 73 PLRLIRRECSTDGTRKYVFALNRPRLAGKMIEAVFIPEEKRGTVCISSQVGCVLDCPFCH 132 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG--QRPITNVVMMGMGEPLLNLNNVVPA 191 T QGF NL EI+ QV + +T +T++V MGMGEPL N V + Sbjct: 133 TGTQGFEGNLSAGEIVAQVLAIKADLRHEPMTDDLHNDVTHIVYMGMGEPLANEEGVHGS 192 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 + I++D+ G LS+RR+T+STSG+ P +++LG + V LAISLH+ DE RD +VPIN+K Sbjct: 193 LAILMDEDGLKLSRRRITVSTSGLTPQIERLGAVHPVNLAISLHSAIDEKRDLLVPINRK 252 Query: 252 YNIETFLAAVRRYLEKSN-ANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 + LA +R L+ A Q +T+EYV+LD VND E LA + +NLI Sbjct: 253 HP----LAQLRECLDAYPLATQRHITLEYVLLDGVNDQAEDLAALARFVNPEREWVNLIQ 308 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 +NP+PG Y ++ +++F++ L+S G VR++RG DI AACGQL D Sbjct: 309 FNPYPGTSYRGTAKESMNQFAQHLISKGIRATVRRSRGQDIMAACGQLKADT 360 >UniRef50_C9KJ31 Radical SAM enzyme, Cfr family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ31_9FIRM Length = 347 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 131/344 (38%), Positives = 194/344 (56%), Gaps = 10/344 (2%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ L ++++E + +RA Q+ +WMY F +MT+++K LR +L I Sbjct: 3 DIFGLTVEELQEALQPFSLPKYRARQIAEWMYQRGATGFADMTNLSKKLREELSGAFVIG 62 Query: 79 APEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 P+ + SSDG T K+ + D VETV + + ++CVS+Q GC + C FC++ Sbjct: 63 RPKCKDRLDSSDGHTTKFLLEFTDGTAVETVLMRQPYGNSICVSTQAGCNMGCAFCASTL 122 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ-RPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G RNL EI+ Q A I + GQ + VV+MG GEPL+N NV+ + ++ Sbjct: 123 HGMARNLTTGEILSQ---AIVISDMLRAEGQGEKVDTVVIMGSGEPLMNYENVLGFIRLL 179 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 +D+ GLS R +TLSTSG+VP + KL + I ++L++SLHAP E+R ++PIN+KY + Sbjct: 180 HEDYVLGLSYRSITLSTSGIVPQMYKLAEEGIPISLSVSLHAPEQELRSTLMPINRKYPL 239 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + A R Y E + RVT EY+++D VNDG E A +L LL+ +NLIP NP Sbjct: 240 VDVVRAARHYAE---VTKRRVTYEYILIDRVNDGEEQARELVSLLRGQLASVNLIPINPV 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 R S +RID F L ++ VR+ G DI AACGQL Sbjct: 297 AERHLLRPSAARIDWFEHYLTAHHINVTVRREMGTDIQAACGQL 340 >UniRef50_C7NA88 Radical SAM enzyme, Cfr family n=5 Tax=Fusobacteriaceae RepID=C7NA88_LEPBD Length = 372 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 127/347 (36%), Positives = 201/347 (57%), Gaps = 10/347 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 KI++L ++ + ++ F ++ K F A QV W+++ NFDE ++I+K R LKE Sbjct: 22 KIDILGMDLESLQRKFVEIRLKKFNASQVFDWLHNKLVFNFDEFSNISKKDREILKEKFY 81 Query: 77 IRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 + E Q S DG T K+ + D+R +E+V I +R TLCVSSQ+GC + C FC+T Sbjct: 82 VEKLEFKTHQVSEDGDTEKFLFELKDKRLIESVLISHKNRHTLCVSSQIGCLIGCDFCAT 141 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 A + RNL +SEI+ Q + K + + + NVV MGMGEP LN + V+ ++ + Sbjct: 142 ATMTYERNLSISEILLQYYYVQKHL----LQRGEKLGNVVYMGMGEPFLNYDAVLGSINM 197 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYN 253 + G SKR T+STSG+V + + + + + LAISLH+ D++R+EI+PINK++ Sbjct: 198 LNSPKGQNFSKRNFTISTSGIVNGIKRFTENENQINLAISLHSVKDDVRNEIMPINKRWG 257 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 ++ ++ Y +++ + R+T EY++++ +N E A +LA L C +NLIP+NP Sbjct: 258 VKQLKESLLEYQKQT---KNRITFEYILINDLNCEPEDARELAGFLNSFSCLVNLIPYNP 314 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 G PY S + F K+L +R+T+G DI AACGQL Sbjct: 315 VGGKPYKTPSKQKQREFYKLLKDKNVNVTLRETKGQDIAAACGQLKA 361 >UniRef50_D1CBZ4 Radical SAM enzyme, Cfr family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBZ4_THET1 Length = 371 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 143/364 (39%), Positives = 212/364 (58%), Gaps = 16/364 (4%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M L +N K K +LLDL+ Q++RE+ + +RA QV + +Y + ++M Sbjct: 3 MHSALGIAKNKNHKPAK-SLLDLSLQELREWIRLRDYPEYRAVQVWQAIYRQLEVDPEKM 61 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQR-SSDG--TIKWAIAVGD-QRVETVYIPE-DDRA 115 T + K LR L AE P + + +DG T K + D +E+V + D RA Sbjct: 62 TSLPKALREVLS--AEFPFPNITPVRTFVADGGDTEKVLFQLEDGNAIESVLMEYMDGRA 119 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 T+CVSSQ GCA+ C FC+T GF RNL EI+ Q+ +K + + G+R +TN+V Sbjct: 120 TVCVSSQAGCAIGCTFCATGLGGFYRNLSAGEIVYQILYFSKKL---RDKGKR-LTNIVY 175 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISL 234 MGMGEPL NL+ V ++E + + G S RR+T+ST+G+V +D+ + V LAISL Sbjct: 176 MGMGEPLANLDAVWRSVENLHEPTGMNFSARRITISTAGLVHQIDRFPPTDLQVNLAISL 235 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 HAPND++R I+PIN+++ I +A+ +RY+E+++ R+T EYV++ N EHA Sbjct: 236 HAPNDDLRTSIMPINRRWPISELIASAKRYVERTHR---RITFEYVLIAGCNSSKEHARD 292 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 L+ LL+ C +NLIP N PG+P+ S ++ F +L+S G VR RG DI AA Sbjct: 293 LSNLLRGLLCHVNLIPLNRVPGSPFEPPSTEEVNTFRDILLSAGIPCTVRLERGADILAA 352 Query: 355 CGQL 358 CGQL Sbjct: 353 CGQL 356 >UniRef50_Q2J713 Ribosomal RNA large subunit methyltransferase N n=137 Tax=Bacteria RepID=RLMN_FRASC Length = 421 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 145/367 (39%), Positives = 205/367 (55%), Gaps = 13/367 (3%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYH--YCCDNFDEMTDINKVLRGKLKEVAE 76 +L DL RQ+ R+ LG+ FRADQV + Y D + MTD+ + R L + Sbjct: 37 HLADLTRQERRDVAVSLGQPAFRADQVARHYYARLIAADEPEAMTDLPERDRQPLLDALL 96 Query: 77 IRAPEVVEEQRSSDGTIK---WAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCS 133 R V DG + W G +E+V + DRAT+CVSSQ GC + C FC+ Sbjct: 97 PRLLVPVRTLSCDDGLTRKTAWRTVDGAS-LESVIMRYPDRATVCVSSQAGCGMGCPFCA 155 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG-QRPITNVVMMGMGEPLLNLNNVVPAM 192 T Q G RNL +EI+ QV AA+++ ++ G + ++NVV MGMGEPL N V+ A+ Sbjct: 156 TGQGGLTRNLSTAEIVEQVVHAARVLRRRELAGGETRLSNVVFMGMGEPLANYAAVIAAL 215 Query: 193 EIML--DDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPIN 249 + G GLS R +T+ST G+VPA+ +L G+ + V LA+SLHAP+D +R+E+VPIN Sbjct: 216 RRLTAHPPEGLGLSARGLTVSTVGLVPAIRRLAGEGLPVTLAVSLHAPDDVLRNELVPIN 275 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 ++ + LAA Y E + RV++EY ++D VND A LA+LL +NLI Sbjct: 276 TRWPVVEVLAAAWEYAEVTGR---RVSVEYALIDGVNDDVGRADALADLLVGRLAHVNLI 332 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 P NP G+ + S+ + F + L G T VR TRG +I AACGQLA + + +RT Sbjct: 333 PLNPTGGSSWRASAPAGQRAFVRRLRDRGIVTTVRDTRGREIAAACGQLAAEPAGKPERT 392 Query: 370 LRKRMQG 376 R G Sbjct: 393 DRPEQVG 399 >UniRef50_C0WD85 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD85_9FIRM Length = 352 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 201/349 (57%), Gaps = 16/349 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K +L L +QM++ F LG K FRA+QV +W+Y F+EMT+++K R L+ Sbjct: 3 KKEILGLTLEQMQDEFLALGLKKFRAEQVFRWIYEKGATTFEEMTNLSKENRSLLEGTYS 62 Query: 77 IR--APEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFC 132 I A +V+ S+D T K + + D VETV + D + C+SSQVGCA+ C FC Sbjct: 63 ILSGAVKVLRTYDSADRLTHKVLLGLSDGASVETVLMHHDYGYSACLSSQVGCAMNCTFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL EI+ Q++ ++ G+R ++ +V+MG GEP+LNL+NV+ A+ Sbjct: 123 ASGLHGFMRNLTAGEILAQLYYFDHVLLP---KGER-VSRIVIMGSGEPMLNLDNVLAAL 178 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKL---GDMIDVALAISLHAPNDEIRDEIVPIN 249 ++M D G +S R +T+ST G+VP ++++ G I+ LA+SLHA +RD ++PIN Sbjct: 179 DLMHHDKGQCISYRNMTISTCGIVPGIEEMTRQGRTIN--LAVSLHAATGALRDRLMPIN 236 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 KY + A RY EK N Q V EY++L +ND E A LAE L C +NLI Sbjct: 237 GKYPFPEVIDAASRY-EKMNGRQ--VMYEYILLAGINDREEDARALAEALSGKECVVNLI 293 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P NP P + R + +DRF + L VRK G DI+AACGQL Sbjct: 294 PANPVPEKGFRRPEDRDVDRFFQYLKKRHINVTVRKEMGKDINAACGQL 342 >UniRef50_B0VIB4 Putative radical SAM-dependent enzyme (YfgB) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIB4_9BACT Length = 350 Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 126/336 (37%), Positives = 194/336 (57%), Gaps = 10/336 (2%) Query: 34 DLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTI 93 DL E +R QV+ W+Y + + ++MT++ + R LK PE+ + S DG + Sbjct: 23 DLPE--YRIKQVLSWLYKFYLNEPEKMTNLPEEFRAFLKTNYSFFLPEIESKLVSQDGAV 80 Query: 94 KWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQV 152 K+ + + D ++ E+V IP + + TLC+S+QVGCA CKFC+T + G RNL EIIGQV Sbjct: 81 KYRLLLEDGKIIESVLIPAEKKNTLCLSTQVGCARNCKFCATGKMGLIRNLATQEIIGQV 140 Query: 153 WRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLST 212 A+K K +G +TN+V+MGMGEP+ NL NV+ A++I+ + GF S RR+T+ST Sbjct: 141 IIASK---ELKNSGTAKLTNLVLMGMGEPMDNLKNVLMALQILQSNAGFSFSPRRITVST 197 Query: 213 SGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNAN 271 GVVP + L D I LA+SL + R +++P++ +YN+ A+ YL K++ Sbjct: 198 CGVVPGIIALADSGIKAKLALSLTSAIQSKRRKLMPVSDQYNLIQLKQALLYYLRKTSF- 256 Query: 272 QGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFS 331 R+TIEY+++ + N +E L + D CKIN IP+NP +P+ + + I F Sbjct: 257 --RITIEYILIPNFNMDSEDLAALRKFTGDLSCKINFIPYNPGRNSPFRAPTETEIKDFM 314 Query: 332 KVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 + +RK+RG DI ACGQL + + K Sbjct: 315 QRAQKLPQAITLRKSRGADIFGACGQLTKNNLGEKK 350 >UniRef50_Q1DCU1 Ribosomal RNA large subunit methyltransferase N 1 n=3 Tax=Bacteria RepID=RLMN1_MYXXD Length = 359 Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 131/360 (36%), Positives = 193/360 (53%), Gaps = 10/360 (2%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 D NL DL R + G P+ DQ+ +Y FDE+ + L L+E Sbjct: 3 SDTSANLYDLTRPALGALLSGWGFGPYHRDQLWTALYRRHATTFDELDGLKPELLRMLRE 62 Query: 74 VAEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKF 131 + E SSDG T K + + D Q +ETV + RAT+C+S+Q GCA+ C F Sbjct: 63 HTRLGQLATHHESFSSDGFTHKLLLRLDDGQTIETVLMRFKGRATVCISTQAGCAMGCVF 122 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+T Q G +R+L EI+GQ+ +I+ A+ T + NVV+MGMGEPL N + + A Sbjct: 123 CATGQMGLSRHLTPGEIVGQILHVNRILRASGET----LRNVVLMGMGEPLHNYEHTMSA 178 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINK 250 +++++D G + R +TLST GVVP + +L D + LA+SLH D R +VP + Sbjct: 179 VDVLVDALGLAMGPRFITLSTVGVVPGIRRLADEERPIHLAVSLHGATDAERAALVPAGR 238 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 ++ ++ + A R Y EK + R+ E+ ++ ND EHAH L +LL+ +N+IP Sbjct: 239 RWPLDELMDACRYYSEK---RKRRIFFEWTLISGRNDTAEHAHTLGQLLRGMDAHVNVIP 295 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTL 370 NP G G S + F VL +Y + VR+ RG DIDA CGQL V R++R+L Sbjct: 296 LNPTVGYDGGPSRPESVRAFQDVLATYDVPSTVRQRRGIDIDAGCGQLKATVERRSRRSL 355 >UniRef50_D1B6H8 Radical SAM enzyme, Cfr family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6H8_THEAS Length = 462 Score = 229 bits (585), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 131/344 (38%), Positives = 190/344 (55%), Gaps = 13/344 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K++ L L+ + + LGEK FRADQV W Y F M+D++ LR +L Sbjct: 3 KMDALSLSYEDWVREMEALGEKRFRADQVCGWFYRRHVFEFQLMSDLSLELRNRLDGAFR 62 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + P+++ + S DGT K+ VE+V I R T CVS+QVGC L C FC+T Sbjct: 63 VGLPKMLGMRASGRDGTKKFLFDFDGSSVESVAIWHPGRITACVSTQVGCPLGCPFCATG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q GF RN+ V E++GQ +G I N+V MGMGEP+LN +N++ A+ + Sbjct: 123 QSGFERNMTVGEMVGQFLAMEARLGE--------IKNLVFMGMGEPMLNYHNLIGAIRNL 174 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 GL R +T+STSG++P + L + + V LA+SLHAPNDE+RD++VPIN +Y + Sbjct: 175 NHPKMRGLGIRHITVSTSGIIPGILNLAREGLGVRLAVSLHAPNDELRDQLVPINAQYPL 234 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + A+ Y E + R+TIEY + D VND A QL E LK +NLIP + Sbjct: 235 KELKRALMEYQEITGD---RITIEYSLFDQVNDSVPMARQLGEYLKGLSAFVNLIPGSCV 291 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + S R+ F +L + G+ +R+++G D+ ACGQL Sbjct: 292 GDQRFRPSPPFRVRAFGDLLTAMGYPVAMRQSKGSDVGGACGQL 335 >UniRef50_B9E1E5 Putative uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E1E5_CLOK1 Length = 362 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 125/343 (36%), Positives = 198/343 (57%), Gaps = 13/343 (3%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+L+ N +++ + K E FRA Q+M W+Y +F+ MT+I+K + KLK+ I Sbjct: 6 NILNFNIEELENWMKVNDESKFRASQIMDWIYKKNQYDFNYMTNISKNVIEKLKKNFYIG 65 Query: 79 APEVVEEQRS-SDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 PE++E+Q+S S T K+ D+ + ETV + ++CVS+QVGC + CKFC++ Sbjct: 66 IPELIEKQKSKSQDTFKFLYKFQDKNIIETVVMKYRHGNSICVSTQVGCRMGCKFCASTV 125 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL EI+ Q+ ++ + I+N+V+MG GEPL N +NV+ + ++ Sbjct: 126 NGMVRNLTSGEILAQILKSQTEIN-------ERISNIVLMGSGEPLDNYDNVLKFLNMVN 178 Query: 197 DDFGFGLSKRRVTLSTSGVVPA-LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 + + +R +TLST G+VP +D + + + LAISLH+P++ R +++PI KY+IE Sbjct: 179 SKYSLNIGQRHITLSTCGIVPKIMDLANENLQITLAISLHSPDNFSRRDMMPIANKYSIE 238 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + A + Y+ K+ RV+ EY ++ VND E A +L +LLK C +NLIP N Sbjct: 239 EIIYACKYYINKTGR---RVSFEYALVKGVNDSLEFAERLVQLLKGLLCHVNLIPVNEVK 295 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + +SS I +F L+ T +R+ G DIDAACGQL Sbjct: 296 ENDFKKSSEDNIKKFYNKLIENKIETTIRREMGSDIDAACGQL 338 >UniRef50_A4XL78 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Clostridia RepID=RLMN_CALS8 Length = 344 Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 126/340 (37%), Positives = 202/340 (59%), Gaps = 15/340 (4%) Query: 22 DLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPE 81 D +++++ ++ GEKPFRA+Q+ +W+Y + + T+I LR +++E + + Sbjct: 7 DFTFDELKKWVEETGEKPFRANQIFEWLYKKNATDVNSFTNIPTQLRKRIEEEFILNSLR 66 Query: 82 VVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 VV+ + SDG +IK+ + + D +E+V++P +C+S+QVGC ++C FC++ G Sbjct: 67 VVKYE--SDGESIKFLLELVDGNAIESVFLPYKYGNAICISTQVGCRMKCAFCASTIGGM 124 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL E++ Q IV +T ++ I+NVV+MG GEP N+ NV ++I+ Sbjct: 125 IRNLSAGEMVDQ------IVNIENIT-KKKISNVVLMGSGEPFDNIENVFKFIDIINSKE 177 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G + R +T+ST G+V + KL + V LAISLHAPN+ +R+++VP+N+KY+IE L Sbjct: 178 GKNIGARHITISTVGIVDGIYKLSEYPKQVNLAISLHAPNNNLRNKLVPMNRKYSIEDIL 237 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 AV Y+ K+N RVT EY ++D VND E A++LA++L +NLIP NP G Sbjct: 238 KAVDYYISKTNR---RVTFEYALIDGVNDSIECANELAKILSGKLVHVNLIPVNPVNGRN 294 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + + R+ F VL+ G +R+ G I AACGQL Sbjct: 295 FKKPPKERVKEFYNVLILSGIQVTIRRELGSSIAAACGQL 334 >UniRef50_A4ECT0 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4ECT0_9ACTN Length = 350 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 123/342 (35%), Positives = 191/342 (55%), Gaps = 12/342 (3%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ DL++ +RE +LG+ FRA Q+++W++ +FD+MT++ K R +LKE Sbjct: 9 DIRDLSQNDIRELVAELGQPAFRAKQLIEWVFEKNVCSFDDMTNLPKAFREQLKEAFAFD 68 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 P + +Q S DG+ K+ + D VETV +P ++ ++CVS+Q GC + C FC+T Sbjct: 69 TPTELTKQVSKDGSRKYLLEYHDGVSVETVGMPRRNKLSVCVSTQAGCGMGCAFCATGLN 128 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G R+L EI+ QV + G T+VV MG GEP N + V+ A+ I+ D Sbjct: 129 GLKRSLTAQEIVDQVLHVSNDFGERA-------TSVVFMGQGEPFANYDEVLKALRILND 181 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIET 256 G G+ R +T+STSGV+P + K D+ + LA+SLH+ R++++P KKY + Sbjct: 182 PDGIGIGARHLTVSTSGVIPGIRKFADIPEQFTLAVSLHSAIQSTRNKLMPGVKKYTLFR 241 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 A++ Y EK+ R T EY M++ VND L + + T C +NLI N G Sbjct: 242 LHEALQLYTEKTGR---RPTYEYAMIEGVNDTNPEMQALCDFCEGTLCHVNLIQLNDIEG 298 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +P S +++ + L S G T +R +RG+DIDAACGQL Sbjct: 299 SPLKPSPIHKVEDLQRRLESRGIETTIRNSRGNDIDAACGQL 340 >UniRef50_UPI00016C54F2 hypothetical protein GobsU_25056 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C54F2 Length = 355 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 126/337 (37%), Positives = 189/337 (56%), Gaps = 7/337 (2%) Query: 26 QQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEE 85 + +R + + G+ P R +Q+ K + F++M+D+ K LR L + + V Sbjct: 4 ETLRAWLTERGQPPMRVNQICKQILANRATAFEDMSDLPKGLRADLAGAFRVFSMSVERH 63 Query: 86 QRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLR 144 +SD T K+ + + D R +E V I +D RAT C+S+QVGC + C FC++ G RNL Sbjct: 64 FAASDDTHKFVLRLADGRMIEAVLIQDDGRATACISTQVGCGMGCVFCASGLNGVVRNLT 123 Query: 145 VSEIIGQVWRAAKIVGAAKVTGQRP--ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFG 202 E++ Q+ + A +R +T++V+MGMGEPL NL+N++ A+ + D G G Sbjct: 124 AGEMVEQLVLLRNLTDANSTNPERAPRLTHIVVMGMGEPLANLDNLLDALAVAGDKNGLG 183 Query: 203 LSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAV 261 + R VT+ST G+ + KL + LA+SLHAPNDE+R IVP N K ++ LAA Sbjct: 184 IGARHVTISTVGLPAKIRKLAESGKQYHLAVSLHAPNDELRTRIVPTNDKVGMDAILAAA 243 Query: 262 RRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGR 321 + EK+ +VT EYV+L +ND HA QLA LL+ +NLIPWN G + R Sbjct: 244 DEFYEKTGR---QVTYEYVVLGGLNDQAPHARQLAGLLRGRQAHVNLIPWNAVEGLAFKR 300 Query: 322 SSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +++ + L G + VRK +G +IDAACGQL Sbjct: 301 PADADLQYLIDTLRRGGISVKVRKRKGAEIDAACGQL 337 >UniRef50_C7RGU3 Radical SAM enzyme, Cfr family n=5 Tax=Anaerococcus RepID=C7RGU3_ANAPD Length = 341 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 130/345 (37%), Positives = 198/345 (57%), Gaps = 14/345 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K L D + +++ E F G + FRA QV + ++ ++F M+D++K +R KL E + Sbjct: 2 KDKLNDKSIKELEEIFTKEGYQKFRAKQVYRQIHVNKVNDFKLMSDLSKDMREKLSEKYD 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 +V +E S D T K+ ++ D + E V++ D R T+C+SSQVGC + CKFC++ Sbjct: 62 FPKMKVEKEFVSELDSTKKYLFSLADGNIIEAVFMDYDKRKTICISSQVGCRMGCKFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + G RNL E+I +V+ ++ G I N+V+MG+GEPL N N+ +EI Sbjct: 122 TKNGRERNLSAGELIEEVYALERLNG--------DINNIVIMGIGEPLDNYENIRKFIEI 173 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + D+ G LS R +TLSTSG+ P + KL D +DV LA+SLH +D+ R + +PI KY+ Sbjct: 174 ITDEKGRNLSHRSITLSTSGLSPMIRKLADSGLDVNLAVSLHYADDDKRRKFMPIANKYS 233 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 IE+ + A YL+++ + RV+ EYV++D VN+ L LLK INLIP NP Sbjct: 234 IESLMEATDYYLDRT---KRRVSFEYVVIDGVNNLDSDVSNLTSLLKGKNVHINLIPLNP 290 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 Y R ++ + F L+ +RK+ G DIDA+CGQL Sbjct: 291 IEEFSYDRPKSTALRDFRDKLLKKKLNATIRKSMGSDIDASCGQL 335 >UniRef50_B2A2K6 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RLMN_NATTJ Length = 351 Score = 227 bits (578), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 133/356 (37%), Positives = 197/356 (55%), Gaps = 15/356 (4%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + K +L DL +++E+F G + FRA Q+ WMY D+ + M++I K LR +L E Sbjct: 3 NHKQSLKDLTLNELQEYFSRKGWQQFRAKQIFDWMYIQQVDSIEVMSNIPKKLRQELMEN 62 Query: 75 AEIRAPEVVEEQ---RSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECK 130 I E+ +DGTIK+ + D VET + D T+C+SSQ GC + C Sbjct: 63 CTINDLELDSNNIYTSPTDGTIKFLSVLKDGIGVETTIMKYDYGNTVCISSQAGCNMNCV 122 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC++ G R+L E+I QV A K++ G I N+V+MG GEPL N +++ Sbjct: 123 FCASTTGGKERDLSPGEMIDQVLMANKVL-----PGSESINNIVVMGSGEPLENYQHLIK 177 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPIN 249 ++I+ D G + R +T+ST G+VP + L + + + LAISLHAPNDE+R++++P+N Sbjct: 178 FLKIVNDGKGLNIGMRHITVSTCGLVPEIYNLAEEELQLNLAISLHAPNDELRNKLIPLN 237 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--DTPCKIN 307 K Y I L A + Y +K+ R+T EYV++ ND + A +L+E L P +N Sbjct: 238 KIYPIHELLEACQVYFQKTGR---RITFEYVLIKDFNDSIDLAKELSETLTALKMPVHVN 294 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 LIP+NP + +SRI F L S VRK RG D+D ACGQL V+ Sbjct: 295 LIPFNPVEETKFTAPPSSRISDFKNNLQSNNIGVTVRKERGVDVDGACGQLRSKVM 350 >UniRef50_C8WPW3 Radical SAM enzyme, Cfr family n=3 Tax=Coriobacteriaceae RepID=C8WPW3_EGGLE Length = 353 Score = 226 bits (577), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 186/336 (55%), Gaps = 14/336 (4%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQ 86 ++ K+LG+ FRA Q+ +W+Y ++DEMT++ LR L E + P VV+ Q Sbjct: 20 ELASVMKELGQPAFRAQQLQEWLYQRHASSYDEMTNLPGSLRATLAERFPLTMPTVVDRQ 79 Query: 87 RSSDGTIKWAIAVGDQ-RVETVYIPE--DDRATLCVSSQVGCALECKFCSTAQQGFNRNL 143 S DGT K+ + D RVETV IP DR T+C S+Q GC + C FC+T Q+GF RNL Sbjct: 80 ISKDGTRKYLVEFDDGIRVETVGIPSRNGDRLTVCFSTQAGCPIACAFCATGQEGFARNL 139 Query: 144 RVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 EI+ QV + +G + +TN V MG GEP LN +N + A+ I+ G + Sbjct: 140 IPGEIVDQVLIVQEDMG-------KRVTNAVGMGQGEPFLNYDNTMAALRILNHKKGLEI 192 Query: 204 SKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 R +++ST G++P L++ G+ LA+SLHA IRD I+P +Y + + A++ Sbjct: 193 GARHISVSTCGILPGLERFSGEPEQFTLAVSLHAARQPIRDLIMPNVARYKLPSLKEALQ 252 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRS 322 Y+ K+N R+T+EY+M++ VND L + + C +NLIP N G+ + S Sbjct: 253 NYVAKTNR---RITLEYIMIEGVNDAPVDLKALQKFCSNLLCHVNLIPINAIEGSEFQPS 309 Query: 323 SNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 S I+ + + G +R +RG DI ACGQL Sbjct: 310 SPETINLWLSEISKKGTEATLRDSRGSDISGACGQL 345 >UniRef50_B2A0B9 Ribosomal RNA large subunit methyltransferase N 3 n=6 Tax=Verrucomicrobia RepID=RLMN3_OPITP Length = 374 Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 125/341 (36%), Positives = 200/341 (58%), Gaps = 18/341 (5%) Query: 32 FKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDG 91 ++ GE FRA Q++ W+Y ++D MT++ K LR L + ++ +V ++S+D Sbjct: 22 LRERGEPAFRASQILDWVYKKRARSWDGMTNLPKPLRTWLDDTFDLMPATLVLNKQSADV 81 Query: 92 TIKWAIAVGD-QRVETVYI--PED------DRATLCVSSQVGCALECKFCSTAQQGFNRN 142 T K + + D +ETV I P++ R T+C+S+QVGCA+ C FC++ G R+ Sbjct: 82 TDKLLLELRDGSLIETVIIRAPQEGVGQDHSRKTICISTQVGCAMGCVFCASGLAGLKRD 141 Query: 143 LRVSEIIGQVWRAAKIVGAAKVTGQRPIT---NVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 L EI+ Q+ + A + N+V+MGMGEPL N + ++ A+ I+ D+ Sbjct: 142 LSAGEIVAQLLQVCYREDALTPRAHMELASFDNIVVMGMGEPLANYDALIRALTILNADW 201 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G G RR+T+STSG+VP + +L D + LAISLH DE+R++I+P+NK + + L Sbjct: 202 GLGFGARRITVSTSGLVPKILQLADEPLGFRLAISLHGATDEVREKIMPVNKAFPLAKLL 261 Query: 259 AAVRRYLEKSNANQGR-VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGA 317 AV+ + EK GR +T+E++++D VND E A +L ++ D +NLIP+N G Sbjct: 262 PAVKAFSEK----HGRMITLEFILIDGVNDSLEQAEKLRDIALDLHAHVNLIPYNTVEGL 317 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + R S +R +RF+ VL + + +R+ +G DIDAACGQL Sbjct: 318 AWKRPSITRQERFADVLRARRVSVTLRREKGHDIDAACGQL 358 >UniRef50_A4SEQ5 Ribosomal RNA large subunit methyltransferase N n=10 Tax=Chlorobiaceae RepID=RLMN_PROVI Length = 373 Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 130/361 (36%), Positives = 200/361 (55%), Gaps = 16/361 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+ DL QQ+ ++ E +RA Q+ +W++ + ++F+EMT ++K LR L+E I Sbjct: 19 NITDLTLQQLTGRLAEMKEPAWRAKQIHEWLFSHRAESFEEMTTLSKALRKALEETFAIT 78 Query: 79 APEVVEEQRSSDG-----TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFC 132 PEV + S++G T K + + D +ETV IP R T C+SSQ GCAL+C FC Sbjct: 79 PPEVEQHDNSTEGACPGPTEKLLLRLPDGAMIETVLIPGPGRLTACLSSQAGCALQCSFC 138 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T GF RNL EI GQ ++ A+ ++ ITN+V MGMGEPLLN NV A+ Sbjct: 139 ATGSLGFKRNLTPGEITGQANALNSMLAASG--REQKITNIVFMGMGEPLLNTLNVFDAV 196 Query: 193 EIM-LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPIN- 249 E + + +S+R++T+ST G++P + KL + LA+SLH+ E R+ ++P+ Sbjct: 197 ETLSTRGYTSSISQRKITISTVGIIPEIAKLATSGMKTKLAVSLHSAFQEKRESLMPLAA 256 Query: 250 KKYNIETFLAAVRRYLEKSNANQGR-VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 ++Y ++ + Y + N G VT+ Y++L+ VND E A QL CKINL Sbjct: 257 RRYPLDELQPVLAHYAK----NTGEPVTLVYMLLEGVNDTLEDARQLIRFASRFFCKINL 312 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 I +N P+ + DRF L+ G +RK+ G I AACGQLA ++ + + Sbjct: 313 IDYNSIVNIPFQSVCSETRDRFRDRLLEAGLQVTLRKSYGTSIHAACGQLAAKGMEHSNK 372 Query: 369 T 369 + Sbjct: 373 S 373 >UniRef50_B8HRU7 Radical SAM enzyme, Cfr family n=2 Tax=Chroococcales RepID=B8HRU7_CYAP4 Length = 367 Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 128/365 (35%), Positives = 206/365 (56%), Gaps = 15/365 (4%) Query: 7 TPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKV 66 T E+ T LL ++ ++ E+ LG+ +R Q+ +W+Y + E++ K Sbjct: 16 TVESAPTHPKLPPLLGASQAELTEWITALGQPAYRGQQLHQWLYQKGVRSLTEISVFPKA 75 Query: 67 LRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGC 125 R ++ EVA R+ ++ ++ DGT+K+ + + D Q +ETV IP + R T+CVSSQVGC Sbjct: 76 WRQQVAEVAVGRS-QLHYRSQAQDGTVKYLLRLDDGQIIETVGIPSNRRLTVCVSSQVGC 134 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 + C FC+T + GF R+L EI+ QV + GQR ++NVV MGMGEPLLNL Sbjct: 135 PMGCDFCATGKGGFRRHLDRHEIVDQV------LTVQADFGQR-VSNVVFMGMGEPLLNL 187 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDE 244 V+ A+ + D G G +R +T+ST G+ + +L + + LA+SLHA N +R + Sbjct: 188 EAVLEAVRCLNQDVGIG--QRFLTISTVGIPGQIRRLANHHLQATLAVSLHASNQPLRAQ 245 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P + Y +E L R Y++ + RV+ EY++L +ND +HA +LA+ L+ Sbjct: 246 LIPSARHYPLENLLQECRDYVQLTGR---RVSFEYILLGGLNDLPQHALELAQHLRGFQS 302 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP+NP Y R S R+ F ++L + +R++RG D +AACGQL + + Sbjct: 303 HVNLIPYNPISEVDYQRPSPQRMQHFLQLLQEHHIAASIRRSRGLDQNAACGQLRANQMA 362 Query: 365 RTKRT 369 K + Sbjct: 363 GVKSS 367 >UniRef50_C1F813 Radical SAM enzyme, Cfr family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F813_ACIC5 Length = 396 Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 141/372 (37%), Positives = 204/372 (54%), Gaps = 41/372 (11%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L L+ +++ E D P+R QV +Y ++ E+T + + LR L++ Sbjct: 27 LFGLSFEELSEALADFRLPPWRLRQVRHALYRQWAASWSEVTTLPQELRESLEKAGFAPG 86 Query: 80 -PEVVEEQRSSDGTIKWAIAVGD-QRVETVYIP----------------------EDD-- 113 P +VE RS DGT ++ IA D Q VETV++P ED Sbjct: 87 LPGIVETFRSVDGTERYLIAGHDGQTVETVWMPGGDGGEAGDGSGSDGAGDDRPGEDSGE 146 Query: 114 ----RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 RAT+CVSSQ+GCA+ C+FC TA+ G RNL EI GQV ++ +V R Sbjct: 147 AAYQRATICVSSQIGCAVNCQFCLTARLGIIRNLTAGEIAGQV---VAVLKRQQVEMGRD 203 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDV 228 N+V MGMGEP LN + + A+ ++ D+ G +S R+T+STSG+VP + + + + Sbjct: 204 RINLVFMGMGEPFLNYDAFMDAVRLLSDEVGIPVS--RMTVSTSGIVPGILRFAEEPVRP 261 Query: 229 ALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDG 288 LAISL+AP+D +R+ ++PIN+K++I L AVR+ ++ RVT EYV+L VND Sbjct: 262 KLAISLNAPDDIVREAVMPINRKWDIAEVLDAVRKVPLRAKE---RVTFEYVLLGGVNDQ 318 Query: 289 TEHAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKT 346 EHA +A LL+ + P K+NLI WNP P PY + F + L+ G +R+ Sbjct: 319 PEHAETVARLLRRANLPLKVNLIVWNPGPDVPYTMPKAEDVAAFQEYLVGKGVPAYIRRP 378 Query: 347 RGDDIDAACGQL 358 RG DI AACGQL Sbjct: 379 RGRDIYAACGQL 390 >UniRef50_Q5LY98 Ribosomal RNA large subunit methyltransferase N n=311 Tax=Bacteria RepID=RLMN_STRT1 Length = 389 Score = 223 bits (568), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 128/367 (34%), Positives = 208/367 (56%), Gaps = 10/367 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L R ++ ++ + GEK FRA Q+ W+Y +F+EMT+I+K KL + Sbjct: 25 KPSIYGLTRDELIDWAVEHGEKKFRATQIWDWLYKKRVQSFEEMTNISKDFIAKLNDNFC 84 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + Q S DGT+K+ + D +ETV + + ++CV++QVGC + C FC++ Sbjct: 85 VNPLKQRIVQESKDGTVKYLFELPDGMLIETVLMRQHYGLSVCVTTQVGCNIGCTFCASG 144 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 R+L EI+ Q+ K + G+R +++VV+MG+GEP N +NV+ + + Sbjct: 145 LIKKQRDLTAGEIVAQIMLVQKYFDD-RGDGER-VSHVVVMGIGEPFDNYDNVLRFLRTI 202 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 +D G + R +T+STSG+ P + + + + V LA+SLHAPN+++R I+ IN+ + + Sbjct: 203 NNDNGLAIGARHITVSTSGLAPKIKEFANEGVQVNLAVSLHAPNNDLRSSIMRINRSFPL 262 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP--CKINLIPWN 312 E A+ Y++ +N RVT EY+ML+ VND E+A +LA+L K INLIP+N Sbjct: 263 EKLFEAIEYYIQTTNR---RVTFEYIMLNEVNDHPENAQELADLTKKIRKLSYINLIPYN 319 Query: 313 PFPGA-PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 P Y RS+ R+ F VL G +VR+ G DIDAACGQL + + R ++ Sbjct: 320 PVSEHDHYSRSTKERVAAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAV 379 Query: 372 KRMQGEA 378 G++ Sbjct: 380 AEASGKS 386 >UniRef50_A8SLZ1 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLZ1_9FIRM Length = 348 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 127/353 (35%), Positives = 194/353 (54%), Gaps = 13/353 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + KI L +++ + F LGEK FRA+Q ++M+ + + KVL KLKE+ Sbjct: 3 NKKIEFNSLKIEELEDLFLSLGEKKFRAEQFFRFMHQKKNFEIENCKQLPKVLIEKLKEI 62 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 I + + S D T K+ I + D R+ ETV++ T+C+SSQVGC + C FC Sbjct: 63 GYINTSSIYTKYESKLDNTKKYLIKLFDNRIIETVFMDYGSYCTVCISSQVGCRMGCTFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ ++ F RNL E++ Q++ + I NVV+MG+GEPL N NNV+ + Sbjct: 123 ASTKENFKRNLTSGEMLNQIYLIENDLNLT-------INNVVIMGIGEPLDNYNNVIGFL 175 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKK 251 +I+ + G LS R +T+ST G+V + KL D + + L ISLH P + R EI+PI+ Sbjct: 176 KIINSEKGKNLSLRNITISTCGLVHNIYKLADEKLPITLTISLHNPFQKERREIMPISDN 235 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 ++I+ L A + Y +K++ RV+ EY ++ ND EHA +L +LK C IN+IP Sbjct: 236 FSIDEILKACKYYFDKTSR---RVSFEYTIIKGQNDSREHALELKNILKGLNCHINIIPL 292 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 N S I F +L +YG +RK +GDDI+ ACGQL V++ Sbjct: 293 NSIKEFDGVAPSTKYIYSFKSMLENYGINATIRKKQGDDINGACGQLRQGVLE 345 >UniRef50_C9LG49 Radical SAM enzyme, Cfr family n=16 Tax=Bacteria RepID=C9LG49_9BACT Length = 360 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 122/351 (34%), Positives = 194/351 (55%), Gaps = 17/351 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K NLL L ++++ + L F Q+ +W+Y + DEMT+++ R LK+ Sbjct: 7 KKNLLGLTPSELKDVARSLQLPAFVGKQIARWLYVHHVREIDEMTNLSLAARELLKQQYV 66 Query: 77 IRAPEVVEEQRSSDGTIKWAI-AVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I ++ Q S DGTIK+ + +ETV+IP+ DR TLCVSSQVGC + C FC T Sbjct: 67 IGNSSPIDAQYSKDGTIKYLYRTLSGDYIETVFIPDGDRGTLCVSSQVGCKMHCAFCMTG 126 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 +QG+ +L ++I+ Q++ + + +TN+V MG GEP NL+NV+ A EI+ Sbjct: 127 RQGYVASLSAADILNQIYSLPE---------RERLTNIVFMGQGEPFDNLDNVLRATEIL 177 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 G+ S +R+T+ST G++ L + D +LAISLH R++I+P+ + Y I+ Sbjct: 178 TSPEGYAWSPKRITVSTIGLLQGLKRFLDESKCSLAISLHHAVPAEREKIMPVERAYPIK 237 Query: 256 TFLAAVRRY-------LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 + +++Y E + Q R++ EY++ VND + A + ELLK C+INL Sbjct: 238 DVVRLLKQYDFCRPRTNEGVGSKQRRLSFEYIVFSGVNDSLKDAAAIIELLKGLDCRINL 297 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 I ++ P P + ++ RF L ++G T +R +RG DI AACG L+ Sbjct: 298 IRFHQIPDTPLKGVDDQKMLRFRDYLTAHGIFTTIRASRGQDIFAACGLLS 348 >UniRef50_A0LV48 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Acidothermus cellulolyticus 11B RepID=RLMN_ACIC1 Length = 430 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 144/384 (37%), Positives = 207/384 (53%), Gaps = 37/384 (9%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 VT + +L D + + R + +LGE FRA Q+ + +N DEMTD+ R + Sbjct: 29 VTRRGVPRHLADFSLAERRRWVAELGEPSFRAVQISAHYFGRLTENPDEMTDLPASSRRE 88 Query: 71 LKEVAEIRAPEVVEEQRSSDG---TIKWAIAVGDQRVETV---YIPEDDR---------- 114 L V V E +G I W ++ G VE+V Y P R Sbjct: 89 LVGVLLPPLLRPVRELACDNGLTRKILWRLSDGAY-VESVLMRYPPRHSRHAALGAEADA 147 Query: 115 --------ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG 166 TLCVSSQ GC + C FC+T Q G RNL +EI+ QV AA+ V ++ G Sbjct: 148 DGGSRHGRVTLCVSSQAGCGMGCPFCATGQAGLVRNLSAAEIVAQVAVAARTVARGEMAG 207 Query: 167 QRP--ITNVVMMGMGEPLLNLNNVVPAMEIMLDDF--GFGLSKRRVTLSTSGVVPALDKL 222 P ++NVV MGMGEPL N +VV A+ + + G G+S+R VT+ST G+VPA+++L Sbjct: 208 G-PGRLSNVVFMGMGEPLANYRSVVDAVRRITEPPPEGLGISQRSVTVSTVGLVPAIERL 266 Query: 223 G-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVM 281 + + V LA+SLHAP+DE+R+ +VPIN+++ + L A RY E + RV++EY + Sbjct: 267 ATEGLAVTLAVSLHAPDDELRNVLVPINRRWPVRDVLGAAARYAE---VTKRRVSVEYAL 323 Query: 282 LDHVNDGTEHAHQLAELLKDTPCK---INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYG 338 + VND A LA +K+ + +NLIP NP PG+P+ S+ F + L + G Sbjct: 324 IRDVNDQPWRADALAAQVKEFLGRLGHVNLIPLNPTPGSPWTASTPRAQAEFVRRLAAAG 383 Query: 339 FTTIVRKTRGDDIDAACGQLAGDV 362 T VR TRG +++ ACGQLA V Sbjct: 384 VTVTVRDTRGREVNGACGQLAATV 407 >UniRef50_B8FS78 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Desulfitobacterium hafniense RepID=RLMN_DESHD Length = 357 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 129/349 (36%), Positives = 195/349 (55%), Gaps = 13/349 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +++ DLN+ ++ + +LG FR QV +W+ N++E+ +I R KL+E Sbjct: 6 RMDCRDLNQSELTQHCAELGLPKFRGRQVFQWVQQKAVQNWEELRNIGAGDRQKLQEGLF 65 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPED-----DRATLCVSSQVGCALECK 130 ++ V EQ + DGT K+ D + +E V + D DR T+CVS+Q+GCA+ C Sbjct: 66 LQPLRKVREQIAQDGTRKFLFRCADGETLECVLMDYDRRKNRDRHTVCVSTQIGCAVGCA 125 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+T G+ RNL EI+GQV ++ Q +TN+V MGMGEPLLN V+ Sbjct: 126 FCATGLGGWRRNLSPGEILGQVLDITYLMRQEDPDFQ--VTNIVFMGMGEPLLNYEAVLK 183 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 A+E++ D G G+ RR+T+STSGV P + +L D V LA+SLH+ ++ RD+++P+N Sbjct: 184 AIELLNDPEGQGIGMRRMTISTSGVAPKIRQLAKDNPQVGLAVSLHSAHNTTRDQLIPMN 243 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 +KY +E + A Y +N R+T E ++ E A + LLK +NLI Sbjct: 244 RKYPLEELMEACGDYTTLTNR---RITFEIALISG-QATLEAAQAVGHLLKGQLAHVNLI 299 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P NP G R + + +F++ L S G VR+ +G DIDAACGQL Sbjct: 300 PVNPVAGTGMARPTAKEVQQFAQSLESMGIPVSVREEKGTDIDAACGQL 348 >UniRef50_A9A3L9 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=RLMN_NITMS Length = 351 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 128/356 (35%), Positives = 205/356 (57%), Gaps = 19/356 (5%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA-EI 77 +L L ++M + D+G +RADQ++ +Y+ + +++ + K LR + E I Sbjct: 3 DLYRLLPEEMEKLVIDMGYDRYRADQILLPLYYKFPKDINDIPQLPKKLREEFTEAGYTI 62 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGD-QRVETV---YIPE----DDRATLCVSSQVGCALE 128 + + + S DG T K + + D VETV Y P R+T+CVS+Q+GCA+ Sbjct: 63 GSAKEIHRVVSDDGDTTKLLLELSDGSSVETVLMQYEPTKIGGHPRSTICVSTQIGCAMG 122 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 C FC+T Q GF NL+ I+ QV A+++ + G+ +TN+V MGMGEP+ N + + Sbjct: 123 CVFCATGQMGFETNLKAEHIVSQVIHFAELL---EQRGEH-VTNLVFMGMGEPMANYDEM 178 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVP 247 + A++I+ D GFGL +R +T+ST G+ ++KL + + + LAISLHAPN+E+R ++VP Sbjct: 179 IRAVKILTHDRGFGLGQRHITISTIGITSGIEKLAEENLQIGLAISLHAPNNELRKKLVP 238 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 ++E + + R Y +K+ RVT EY +++ VND E AH+LA LL+ +N Sbjct: 239 TAGPNSVEDIIKSGRDYFKKTGR---RVTFEYALMEGVNDSPEIAHELARLLRGNGSHVN 295 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 +IP NP G + R S + F ++L G VR +G +I AACGQL D++ Sbjct: 296 IIPINPTAGD-FKRPSEKNVLEFEQILRKSGVNCTVRVEKGTEISAACGQLRTDIV 350 >UniRef50_A9FFJ6 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RLMN_SORC5 Length = 389 Score = 221 bits (563), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 134/362 (37%), Positives = 190/362 (52%), Gaps = 49/362 (13%) Query: 36 GEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL--KEVAEIRAPEVVEEQRSSDGTI 93 GE+ F A QV +W++ + MT++ LR L + + E+ PE V RS DGT Sbjct: 24 GERSFTAKQVFQWIHRRGVLDPAAMTNLPARLREHLAAEGLGEVLTPERV--HRSEDGTR 81 Query: 94 KWAIAVGD-QRVETVYIPEDD----------------------------------RATLC 118 K + + D +ETV +P R T C Sbjct: 82 KLLLRLRDGATIETVLLPSVSGPGSQAQLDADAAAALDDDEDDDAAAEAGAAPRVRVTQC 141 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 +S+QVGCA+ C FC++ G R+L EI GQV ++G A + + NVV MGM Sbjct: 142 ISTQVGCAMGCGFCASGVAGLKRHLGAEEIAGQV-----LLGRAMLEEGEELRNVVYMGM 196 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI--DVALAISLHA 236 GEPL N ++ ++ G LS RRVT+STSG+VP + +LG +ALAISLHA Sbjct: 197 GEPLHNYEATARSLRLLTHPEGINLSTRRVTVSTSGLVPEIARLGADFGGQIALAISLHA 256 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 +DE R ++PIN+K+ ++ LAA+R Y + R+TIEY ++ ND A +LA Sbjct: 257 ADDETRSALMPINRKHPLDELLAALRAY---PLPRRRRITIEYTLVAGQNDDPAEARRLA 313 Query: 297 ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACG 356 +LL+ P KINLIP NP + G + R+ F +VL G++ VR+ RGDD+ AACG Sbjct: 314 KLLRGLPVKINLIPMNPIEASSLGPPAQERVAAFQEVLTQAGYSCFVRRRRGDDVSAACG 373 Query: 357 QL 358 QL Sbjct: 374 QL 375 >UniRef50_A5UT23 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Roseiflexus RepID=RLMN_ROSS1 Length = 399 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 142/393 (36%), Positives = 200/393 (50%), Gaps = 51/393 (12%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 +D NL DL+ +M G+ +RA Q+ + +Y D+ MTD+ LR +L Sbjct: 4 QDTLPNLYDLSLAEMERLMTAWGQPAYRARQIFRQLYVNLVDSPLAMTDLPLALRERL-- 61 Query: 74 VAEIR-APEVVEEQRSSD-GTIKWAIAVGDQRV--ETVYIPEDDRATLCVSSQVGCALEC 129 VAE R AP E+ +D G + A+ + V E+V + DRAT+CVS+Q GC + C Sbjct: 62 VAETRLAPLAPEQVHVADQGLTRKALFRLENGVLIESVLMIYPDRATVCVSTQAGCGMGC 121 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIV------------------------------ 159 FC+T G RNL +I+ QV AA+ + Sbjct: 122 VFCATGTLGLLRNLSPGDIVAQVVWAAREMRRFAAERCISPSLAPPDDDSWWTPDTLEDQ 181 Query: 160 --GAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVP 217 A+ ++N+V MGMGEP N + A+EI+ D G + R +T+ST G++P Sbjct: 182 GSSEARSISVSRLSNIVFMGMGEPFANYDRWWRAVEILHDPRGLNMGARSMTVSTVGLIP 241 Query: 218 ALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 + +L + + + LAISLHAP+D +R ++P+N++Y + L A R YL A RV+ Sbjct: 242 GIRRLATETLPINLAISLHAPDDALRSALMPVNRRYPLAALLEATRDYLA---ATGRRVS 298 Query: 277 IEYVMLDHVNDGTEHAHQLAELLK----DTP-----CKINLIPWNPFPGAPYGRSSNSRI 327 EYV+L ND EHA +LA LL TP +NLIPWNP PG P GRS R+ Sbjct: 299 FEYVLLQGKNDEPEHAAKLAALLHGEAGTTPLPLHLVHVNLIPWNPVPGMPLGRSERRRV 358 Query: 328 DRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 F ++L G VR RG I AACGQLAG Sbjct: 359 LTFQRILRERGIACTVRVERGVSIAAACGQLAG 391 >UniRef50_A8DJI2 Radical SAM enzyme Cfr family protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI2_9BACT Length = 363 Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 125/341 (36%), Positives = 182/341 (53%), Gaps = 9/341 (2%) Query: 26 QQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEE 85 QQM + G +R Q+ + ++ + +E++ + + +R +L A ++ + Sbjct: 19 QQMCALMAERGLPAYRGRQLFQALHRQLVETPEEISVLPRAVRTELAAEASLQPLSLAGI 78 Query: 86 QRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLR 144 S DGT ++ V D +ETV+IP+ R TLC+SSQ GC + C FC+TA G RNL Sbjct: 79 FESLDGTRRYLFKVHDGYSIETVWIPDRGRVTLCLSSQAGCPMRCAFCATATLGLQRNLT 138 Query: 145 VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLS 204 EI+ QV + + + N+V+MGMGEPLLN ++V+ A+ ++ D G + Sbjct: 139 AGEIVAQVLYVLRDTVRQRQQPRPAAVNLVLMGMGEPLLNYDHVLHALRVLADPEGLHIV 198 Query: 205 KRRVTLSTSGVVPALDKLGDMIDVA-LAISLHAPNDEIRDEIVPINKKYNIETFLAAVRR 263 RRVTLST G+VP + LG D LA+SL A DE+R ++P+N Y +E A Sbjct: 199 PRRVTLSTVGIVPRIIALGREPDRPRLAVSLTAATDELRARLMPVNLTYPLEALREACLA 258 Query: 264 YLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ----LAELLKDTPCKINLIPWNPFPGAPY 319 + R+T EYV+LD VND + A LA L K+NLIP NP PG P+ Sbjct: 259 FPRHPGE---RITFEYVLLDGVNDSEDQARALLRWLAPLRAQEAAKVNLIPHNPVPGIPF 315 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 R+ RF +L + G T +R+ RG DI AACG LA Sbjct: 316 RPPKLERVLRFQALLRAKGLPTYLRRPRGQDISAACGMLAA 356 >UniRef50_Q2JMN2 Ribosomal RNA large subunit methyltransferase N n=47 Tax=cellular organisms RepID=RLMN_SYNJB Length = 352 Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 127/353 (35%), Positives = 194/353 (54%), Gaps = 20/353 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 I LL + ++++ G+ +R Q+ W+Y + +++T + R ++ Sbjct: 6 IPLLGQSLSALKDWAVAQGQPAYRGQQLHAWIYQKGIRSLEQVTVFPRAWREAVQSYPVG 65 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 R+ +V+ + DGT+K+ + + D Q +ETV IP R T+CVSSQVGC + C FC+T + Sbjct: 66 RS-RIVQRTEARDGTVKFLLGLADGQLIETVGIPTAKRLTVCVSSQVGCPMACDFCATGK 124 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G+ RNL + EI+ QV + G R +++VV MGMGEPLLN + VV A+ + Sbjct: 125 MGYRRNLELHEILDQVLTVQEDFG-------RRVSHVVFMGMGEPLLNRDTVVQAIRSLN 177 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D G G +R +TLST GV + L + V LA+SLHAPN ++R ++P Y ++ Sbjct: 178 QDIGIG--QRHITLSTVGVPRQIAWLAQQDLQVTLAVSLHAPNQDLRQRLIPSASHYPLD 235 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-----CKINLIP 310 T + R Y+ ++ RV+ EY +L VND HA QLA+LL+ +NLIP Sbjct: 236 TLIQDCRDYMLRTGR---RVSFEYTLLSGVNDLPIHARQLAQLLQQASRSGVQLHVNLIP 292 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 +NP A Y R +R+ F + L + VR+TRG D +AACGQL G + Sbjct: 293 YNPISEADYQRPHPTRVREFVRQLEQHQVRATVRQTRGLDGNAACGQLRGSFL 345 >UniRef50_UPI0001C31CDE radical SAM enzyme, Cfr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CDE Length = 329 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 183/323 (56%), Gaps = 20/323 (6%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV 99 FRA QV +W ++EMT++ LR L E + + E +SDGT+K + Sbjct: 18 FRAKQVWEWTARGAA-GYEEMTNLPAALRATLAERVPFSSLTLQHEAHASDGTVKALFST 76 Query: 100 GDQR-VETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAK 157 D R VE V + +D R +LC+SSQ GC L C FC+T F RNL SEI+ Q + Sbjct: 77 HDGRAVEAVLMRYKDGRRSLCLSSQSGCPLTCTFCATGTMKFGRNLTASEILDQALHFRR 136 Query: 158 IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVP 217 I + + V MGMGEP++NL++V+ A + G++ RR +ST G +P Sbjct: 137 I---------EEVDHCVFMGMGEPMMNLDHVLAACRALP---SIGITHRRTAISTVGWIP 184 Query: 218 ALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 +++L D + + LA+SLHAP++ +R +I+P+N +Y + L A R + EK + V Sbjct: 185 GIERLTDSEMPIRLALSLHAPDEALRSQIMPVNDRYPLRDVLRACRDFYEK---KRRMVF 241 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMS 336 IEYVML VNDG A QLA LL+ K+NLIP+NP + Y SS I+ F VL Sbjct: 242 IEYVMLGGVNDGYAQALQLARLLEPWMFKVNLIPYNP-TDSIYDGSSREAIETFRAVLEE 300 Query: 337 YGFTTIVRKTRGDDIDAACGQLA 359 +G + VR TRG DIDAACGQLA Sbjct: 301 HGISATVRLTRGRDIDAACGQLA 323 >UniRef50_B9HMI5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HMI5_POPTR Length = 441 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 136/367 (37%), Positives = 197/367 (53%), Gaps = 35/367 (9%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA-EIR 78 LL ++ ++++ DLG++ +R Q+ +Y + + + V R L+E ++ Sbjct: 55 LLGMSEPELQQLATDLGQQSYRGKQLHHLIYQRKVKEIQDFSQLPLVFRNDLQEAGWKVG 114 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----RATLCVSSQVGCALECKFC 132 + + ++DGT+K I + D R +ETV IP +D R T CVSSQVGC L C FC Sbjct: 115 RSPIFQTVTAADGTVKLLIRLEDNRLIETVGIPVEDEKGSMRLTACVSSQVGCPLRCSFC 174 Query: 133 STAQQGFNRNLRVSEIIGQVWRA-----------------AKIVGAAKVTGQRPITNVVM 175 +T + GF+RNL+ EI+ Q A+++ ++ R +TNVV Sbjct: 175 ATGKGGFSRNLQRHEIVEQHRLGSSGTTSTCSKLYLHVLYAQVLAVEEIFKHR-VTNVVF 233 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISL 234 MGMGEP+LNL +V+ A + D G +R +T+ST GV + KL + LA+SL Sbjct: 234 MGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASHKLQSTLALSL 291 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRY-LEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 HAPN ++R+ IVP K Y ++ + + Y LE S RV+ EY +L VND EHA Sbjct: 292 HAPNQKLRETIVPSAKSYPLDAIMKDCKEYFLETSR----RVSFEYALLAGVNDRVEHAK 347 Query: 294 QLAELLKD--TPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI 351 +LAELL +NLIP+NP G+ Y R I F+ VL S T VR+TRG D Sbjct: 348 ELAELLHQWGRGHHVNLIPFNPIQGSDYKRPHKKAIQAFAAVLESRKVTVSVRQTRGLDA 407 Query: 352 DAACGQL 358 AACGQL Sbjct: 408 SAACGQL 414 >UniRef50_C9LLK4 Radical SAM enzyme, Cfr family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK4_9FIRM Length = 345 Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 130/345 (37%), Positives = 192/345 (55%), Gaps = 13/345 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K N+ LN Q++ + G FRA Q+ ++Y +FDEMT ++ +R LKE + Sbjct: 2 KRNIWGLNLQELETWVVGNGFPRFRAKQLRDYLYKRHIFHFDEMTQFSQKMRDWLKENGQ 61 Query: 77 IRAPEVVEEQRSSD-GTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P ++ +S D TIK + + D VETV + ++CVS+QVGCA+ C FC++ Sbjct: 62 IDKPVIISRAQSDDEKTIKLLLKLKDGSLVETVCMCHHYGNSICVSTQVGCAMGCIFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 ++G RNL EI+ Q++ A K P ++V+MG GEPL N V+ + + Sbjct: 122 TRKGLERNLTAGEILAQMY-------AFKELYDIPFHSIVLMGAGEPLTNYKEVLHFIHL 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 D +S R +T+ST G+VP + +L D I + LAISLHAPND IR+ +VPI+K + Sbjct: 175 ANDPELLNISYRNITISTCGIVPQIYRLADENIPITLAISLHAPNDRIRNVLVPISKNFR 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I+ ++A Y +K+ + RVT EY+++ +N E+A +L L+ PC INLIP N Sbjct: 235 IKDVVSAAEYYFKKT---KRRVTFEYILIKDMNASVENAKELCRLIGKMPCHINLIPINS 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 I RF +L+ G T VRK GD+I AACGQL Sbjct: 292 TEHIKLYPPEWKEIKRFQDILLKKGKETTVRKQMGDEIQAACGQL 336 >UniRef50_C0QZJ2 Predicted Fe-S-cluster redox enzyme n=2 Tax=Brachyspira RepID=C0QZJ2_BRAHW Length = 342 Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 194/346 (56%), Gaps = 14/346 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 KI++++++ ++ +F + F A Q++ W+Y +F+EM++I K LR L E Sbjct: 4 KISIMNVSEDELSKFCVENNFPKFHASQILNWIYKKYAVSFEEMSNIPKNLRNLLDEYYF 63 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I ++ GT K I++ D++ +E+V + + DR T C+SSQVGC C FC+T Sbjct: 64 IHNSKIETISEDEYGTQKLLISLYDKKKIESVILNKKDRVTFCLSSQVGCGYGCAFCATG 123 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G +RNL EI+ + + + + ++V MGMGEPL N N+ A++ + Sbjct: 124 SMGLSRNLTADEILAEFLLMRAVT--------KKVNSIVFMGMGEPLANTKNLFKAIDTI 175 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 GF L R +T+STSG V + +L + +D LA+SLH+ +++RD+I+PINK+Y I Sbjct: 176 NSFKGFNLGIRHITISTSGEVAGIKQLIERDLDCRLAVSLHSLKNDVRDKIMPINKRYPI 235 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E +A ++RY S + +T E+V++ VND A++L L K+ P K+N+IP NP Sbjct: 236 ENLMAILKRY---SRNGKRMITFEWVLIKDVNDSVNDAYRLVNLKKEFPFKVNVIPMNPV 292 Query: 315 PGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 AP R + I RF +L G + R +G +I A CGQLA Sbjct: 293 EHAPELQRPNKDIILRFKSILKDNGIEVVERFKQGQEILAGCGQLA 338 >UniRef50_C1SKY4 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKY4_9BACT Length = 357 Score = 216 bits (551), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 132/356 (37%), Positives = 206/356 (57%), Gaps = 20/356 (5%) Query: 8 PENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 PEN I L +N+ ++ F G + FRA Q+ KW+Y ++ EMTD++ Sbjct: 2 PEN-------IYLDSMNKFELENFVISQGMQKFRAIQIHKWVYRRGAESVAEMTDLSIAD 54 Query: 68 RGKLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGC 125 R KL +A+ V + ++S+ DG++K+ ++ D + +E V + + R T C+SSQVGC Sbjct: 55 REKLLGMAKFTVMNVADVRKSAMDGSVKFLFSLEDGETIEAVVLNDGRRLTACISSQVGC 114 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 + C FCSTA+ G RNL + EII QV R + + + + N+V MGMGEPL NL Sbjct: 115 RMGCAFCSTAKMGLRRNLTMGEIIKQVKRLNEYLASEGT----KLNNLVFMGMGEPLDNL 170 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDE 244 +NV A+ ++LDD G+G S +++TLST G+ L++L M V LA+S++A + E R Sbjct: 171 DNVKNAINVLLDDDGYGFSHKKITLSTCGLTDRLEELFAMDTPVNLAVSVNAADQETRKG 230 Query: 245 IVPINKKYNIETFLAAVRRY-LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT- 302 ++P++ KY + + +++ L+K + +TIEYV+L VND + A +LA+LL+ Sbjct: 231 LMPVSNKYPLSGLMDVLKKLPLQKRKS----ITIEYVLLRGVNDTLDDARKLAKLLRGLD 286 Query: 303 PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 KINLI +N A Y S +F + L+S +RK+ G DI+ ACGQL Sbjct: 287 KVKINLITYNSGGDAGYLPPSEKDTLKFQEYLISNKIGVFIRKSLGRDIEGACGQL 342 >UniRef50_UPI000050FC81 radical SAM enzyme, Cfr family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FC81 Length = 410 Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 135/394 (34%), Positives = 202/394 (51%), Gaps = 54/394 (13%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K +L D+ + + K++G FRA Q+ + + + + MTD+ K LR L+E Sbjct: 19 KQHLADMTMDERIDAVKEMGLPAFRAKQISTHYFSHYQTDVESMTDLPKDLRADLQERFF 78 Query: 77 IRAPEVVEEQRSSDG-TIK--WAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCS 133 V R+++G TIK W + G VE+V + +R TLCVSSQ GC + C FC+ Sbjct: 79 PHLLTEVRRLRTANGDTIKFLWRLYDG-ALVESVLMRYRNRVTLCVSSQCGCGMNCPFCA 137 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV----------------------------- 164 T QQG RN+ +EI+ QV RA +++ A ++ Sbjct: 138 TGQQGLTRNMSAAEIVEQVIRANQVIAAGELAPAPTSDMPAEGETALGAEADDEQGETSE 197 Query: 165 ------------TGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF--GFGLSKRRVTL 210 TG ++N+V MGMGEPL N V+ A+ ++ G G+S RR+T+ Sbjct: 198 ATVDESGTSTSATGPERVSNIVFMGMGEPLANYKRVMNAVRRFVEPAPQGLGMSARRITI 257 Query: 211 STSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSN 269 ST G+VP ++KL + I V A+SLHAP+DE+RDE++P+N ++ + + A Y + + Sbjct: 258 STVGLVPGINKLAAEDIPVTFALSLHAPDDELRDEMIPVNTRWKADEAIDAAYNYYQVTG 317 Query: 270 ANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAPYGRSSNSR 326 RV+IEY ++ +ND A LA+ L +N IP NP PG+ + S Sbjct: 318 R---RVSIEYALIKDMNDHPWRAELLAKKLNARGRGWVHVNPIPLNPTPGSVWTASEPEV 374 Query: 327 IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 D F + L+ G T +R TRG DID ACGQLA Sbjct: 375 ADEFVRRLIDQGIPTTIRDTRGSDIDGACGQLAA 408 >UniRef50_C7NGZ4 Radical SAM enzyme, Cfr family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NGZ4_KYTSD Length = 426 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 142/396 (35%), Positives = 199/396 (50%), Gaps = 62/396 (15%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 +L DL+ ++ D G FRA+Q+ K + D MTD+ K R +E+ Sbjct: 30 HLADLDPAGRKQAVTDAGWPAFRANQLSKHYFERYTDEPAAMTDLPKAGR---EEMVRGL 86 Query: 79 APEV---VEEQRSSDG-TIK--WAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFC 132 P++ V R+ DG T+K W + G VE+V + +R TLC+SSQ GC + C FC Sbjct: 87 MPQLLTPVSVMRADDGATVKTLWRLHDG-ALVESVLMRYPNRVTLCLSSQAGCGMNCPFC 145 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP----------------------- 169 +T QQG RNL +EI+GQ+ A +++ + G P Sbjct: 146 ATGQQGLTRNLSTAEIVGQLVAANRMLNDPEAPGLAPPPALAEGQVELGENDADPSLDAG 205 Query: 170 --------------------ITNVVMMGMGEPLLNLNNVVPAMEIMLDDF--GFGLSKRR 207 + NVV MGMGE L N V A+ M+D G G+S R Sbjct: 206 ADEVEDASLDTPLAAGGPHRVHNVVFMGMGEALANYRKAVDAVRRMVDPAPAGLGMSARG 265 Query: 208 VTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLE 266 +T+ST G+VPA+DK + + LA+SLHAP+DE+RDE+VPINK++ ++ L A RY E Sbjct: 266 ITMSTVGLVPAIDKFAAEGVAATLALSLHAPDDELRDELVPINKRWKVDEALDAAYRYFE 325 Query: 267 KSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAPYGRSS 323 + RV+IEY ++ +ND A LAE L +N IP NP PG+ + S Sbjct: 326 TTGR---RVSIEYALIRDMNDQAWRADLLAEKLNARGRGWVHVNPIPLNPTPGSKWTASR 382 Query: 324 NSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 +F + L + G T VR TRG DID ACGQLA Sbjct: 383 PGVEQQFVERLRAGGIPTTVRDTRGSDIDGACGQLA 418 >UniRef50_C7M235 Radical SAM enzyme, Cfr family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M235_ACIFD Length = 353 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 128/328 (39%), Positives = 188/328 (57%), Gaps = 20/328 (6%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQR--SSDG-TIKWA 96 +R +Q+ +YH + ++ + +R +L + P + E +R + DG T+K+A Sbjct: 21 WRIEQLFHGLYHEG-QRLEAISTLPARMRAELASHLD---PGLTERRREHADDGETVKFA 76 Query: 97 IAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRA 155 + D VETV + R ++CVSSQ GCA+ C+FC+T Q GF R+L V EI+ Q+ A Sbjct: 77 LEAADGALVETVVMQSARRISVCVSSQAGCAMGCRFCATGQAGFVRHLGVGEIVEQLAIA 136 Query: 156 AKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV 215 + V R +T+VV MGMGEPL N + + A+ + DFG +S RRVT+ST G+ Sbjct: 137 QRSVR------PRRLTHVVFMGMGEPLANASVAIEAIRRIRADFG--ISPRRVTVSTVGI 188 Query: 216 VPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGR 274 VP + +L + V LA+SLHA ND R ++VP+N++Y I+ L A + + E + R Sbjct: 189 VPGIRRLAHADLGVTLAVSLHAANDAARSDLVPMNRRYGIDAVLDAAQEFSELTGR---R 245 Query: 275 VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL 334 VT+E+ ++ VND A +LA + +NLIP NP PG P + + RF++ L Sbjct: 246 VTLEWALIAGVNDRDRDATELAGHARRLAAHVNLIPLNPTPGYPMVGTDPDGVARFARRL 305 Query: 335 MSYGFTTIVRKTRGDDIDAACGQLAGDV 362 S G VR TRG IDAACGQLA DV Sbjct: 306 RSLGVNVTVRDTRGRSIDAACGQLAADV 333 >UniRef50_B0S143 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Finegoldia magna RepID=RLMN_FINM2 Length = 349 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 123/359 (34%), Positives = 203/359 (56%), Gaps = 15/359 (4%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI L ++ +++EFF + GEKPFRA Q + ++ N DEMT+ + LRGKL + Sbjct: 3 NKIILENMTVDELKEFFVNNGEKPFRALQYFQAIHKNRIFNPDEMTNFSNSLRGKLNQYN 62 Query: 76 EIRAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCS 133 +I+ +++ S D T K+ I + D VETV++ ++C+S+Q+GC + CKFC+ Sbjct: 63 DIKNCSIIKRIDSKLDNTKKYLIEMSDGNIVETVFMQYKTHTSICLSTQIGCKMGCKFCA 122 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 + ++ F RNL+ E+ Q++ + I N+V+MG+GEPL N +NV ++ Sbjct: 123 STKKSFVRNLQPYEMCAQIYLVENDLDIR-------INNIVLMGIGEPLDNYDNVSRFID 175 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKY 252 ++ D G +S R +TLST G+V + +L D I + + ISLH P D R++++PI KY Sbjct: 176 LITDKDGQDMSIRNITLSTCGLVDKIIRLANDDIGINITISLHNPFDNERNKLMPIGNKY 235 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 +IE L A Y +K+ + R+ EY ++++VND ++ +L LLK+ C +NLI N Sbjct: 236 SIEEILDACDYYFKKT---KRRIGFEYTVIENVNDSKKYMDKLVSLLKNRNCLLNLITLN 292 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 P ++ F + + T +R+ +G DID ACGQL + + TKR ++ Sbjct: 293 PIEEFNQKSPDRYKMTEFMEYMNKNNVNTTIRRKQGIDIDGACGQLR--INNMTKRGVK 349 >UniRef50_Q7V010 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Prochlorococcus marinus RepID=RLMN_PROMP Length = 348 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 120/351 (34%), Positives = 197/351 (56%), Gaps = 23/351 (6%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC--CDNFDEMTDINKVLRGKLKEVAE 76 NLL + + + + + G+ FR Q+ W+Y+Y + DE+ + R +LK A Sbjct: 3 NLLGCSVKDLEKIALNYGQAAFRGRQIYNWLYNYKNRSKSIDEINVLPLKFRDQLKNEAF 62 Query: 77 IRAPEVVEEQR-SSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 + ++E+ ++DGT+K + D + VE V IP + R T C+SSQVGC ++CKFC+T Sbjct: 63 LFGELTLKEKYLATDGTLKLLLNTRDNESVECVGIPTEKRLTACLSSQVGCPMDCKFCAT 122 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 ++G R+L+VSEI+ Q+ + + ++N+V MGMGEPLLN++ ++ ++ Sbjct: 123 GKEGLKRSLKVSEILDQILFIENQMN-------QKVSNIVFMGMGEPLLNIDELLLSIRS 175 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-------IDVALAISLHAPNDEIRDEIVP 247 + +DF +S+R++T+ST + + KL ++ LAISLHA N +IR+ I+P Sbjct: 176 INEDFA--ISQRKITVSTVAIPKMISKLSELSFQVLGKCQFTLAISLHASNQKIREAIIP 233 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 K Y+I+ + R Y+ ++ RV+ EY+ML VND EHA +L+ L+K C +N Sbjct: 234 SAKNYHIKNIIDDCREYVRETGR---RVSFEYLMLHGVNDKLEHADELSNLIKGFQCHVN 290 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 LI +N + ++ F L + G RK+RG D +AACGQL Sbjct: 291 LIQYNHIEEVEFKQTPIKNAQLFQTRLSNSGINVSFRKSRGSDRNAACGQL 341 >UniRef50_D1R7C7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7C7_9CHLA Length = 364 Score = 210 bits (534), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 112/258 (43%), Positives = 156/258 (60%), Gaps = 12/258 (4%) Query: 104 VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK 163 VE V IP TLC+SSQVGC + C FC T + G RNL EI+ QV+ AK Sbjct: 93 VEFVQIPMQSGGTLCISSQVGCQMGCAFCETGKMGLLRNLTTEEIVSQVY-------LAK 145 Query: 164 VTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG 223 Q N+V MGMGEPL N + V+ A+ I D GFG +RR+T+STSG V +DKL Sbjct: 146 HHNQFSFRNLVFMGMGEPLDNFDAVMQAVRIFNDPKGFGFGRRRMTISTSGCVDGIDKLA 205 Query: 224 DMIDVA--LAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVM 281 ++ A LA+S++AP DE+R+ ++P+N+KY+++T A++ Y K+ ++ I YV+ Sbjct: 206 NLGGQAPNLAVSINAPTDELRNRLMPVNRKYDLQTLYEAMQGYCTKTGR---QILIAYVL 262 Query: 282 LDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTT 341 L ND EHA QL+E LK KINLIP+NP + + I+ F++ L G+ T Sbjct: 263 LQGQNDQIEHALQLSEYLKGLNVKINLIPYNPQSRDRFQAPDLNTIEAFTQSLRQKGYYT 322 Query: 342 IVRKTRGDDIDAACGQLA 359 ++R T+G DI AACGQL Sbjct: 323 LLRLTKGQDIMAACGQLG 340 >UniRef50_B2J6D0 Ribosomal RNA large subunit methyltransferase N n=18 Tax=cellular organisms RepID=RLMN_NOSP7 Length = 364 Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 127/351 (36%), Positives = 193/351 (54%), Gaps = 27/351 (7%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 LL + ++ + + G+ +R Q+ +W+Y + +++ +K R EVAEI Sbjct: 24 LLGASVAELSAWVQQQGQPAYRGKQLHEWIYDKGVRSLADISVFSKQWRA---EVAEIPI 80 Query: 80 PEVVEEQRS--SDGTIKWAIAVGD-QRVETVYIPE--------DDRATLCVSSQVGCALE 128 RS DGT+K+ + + D Q +ETV IP R T+CVS+QVGC + Sbjct: 81 GRSTLHYRSVAPDGTVKYLLRLTDGQIIETVGIPTFAERGEGPKARLTVCVSTQVGCPMA 140 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 C FC+T + G+ RNL EII QV + Q+ ++NVV MG+GEPLLN NV Sbjct: 141 CDFCATGKGGYKRNLARHEIIDQVLTVQEDF-------QQRVSNVVFMGLGEPLLNTENV 193 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVP 247 + A++ + D G G +R +T+ST G+ + + + + + LA+SLHAPN +R++++P Sbjct: 194 LAALKSLNQDIGIG--QRSLTVSTVGIRDRIRQFAQNNLQITLAVSLHAPNQALREKLIP 251 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 + Y +E LA R Y+E + RVT EYV+L VND EHA +L++ ++ +N Sbjct: 252 SARAYPLEELLAECREYVEITGR---RVTFEYVLLAGVNDLPEHALELSKCMRGFQSHVN 308 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 LIP+NP Y R + RI+ F VL VR +RG + DAACGQL Sbjct: 309 LIPYNPIQEVDYKRPNRDRIEAFVNVLKQQNTAVSVRYSRGLEADAACGQL 359 >UniRef50_C9RKM0 Radical SAM enzyme, Cfr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKM0_FIBSS Length = 357 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 121/349 (34%), Positives = 191/349 (54%), Gaps = 13/349 (3%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+ L +++ + +D+ EKP+RADQ+ KW++ ++DEM +I+ LR K+ + + Sbjct: 6 NIKTLTTDELKAWLRDVDEKPYRADQIQKWLFCQQVRSYDEMVNISPALREKMAK--QFT 63 Query: 79 APEVVEEQRSS--DGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + E+QRS DGT+KW D +ETV IP + R ++CVS+QVGCA+ C FC TA Sbjct: 64 LCGLKEDQRSVSVDGTVKWLFETEDGHHIETVMIPANGRYSVCVSTQVGCAMNCAFCRTA 123 Query: 136 QQGFNRNLRVSEIIGQV----WRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 + GF RNL EI+ ++ W + G +TN++ MGMGEPL NL NV Sbjct: 124 KMGFTRNLEAGEILEEIINVNWYLKDNGFMNEEGGVAQVTNIIFMGMGEPLNNLENVHRV 183 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINK 250 + + F + +R+T+STSGVVP + +L D LA+SL++ N+E R ++P+NK Sbjct: 184 CCTLHNQKLFNMGAKRMTVSTSGVVPKIKELVDRNTPCCLAVSLNSTNNEYRSSVMPVNK 243 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 + IE L AV Y+ +++ VT E+V++ ++ + A +L + K+N I Sbjct: 244 TWPIEKLLEAVDEYIRRTD---NYVTFEFVLIQNITCTPKAAKELIRICAPRRVKVNAIV 300 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 N + ++ F + + +R RG DI AACGQLA Sbjct: 301 LNDGDDPTLHAPTPEEVEDFLAAVRAAEIQITIRNPRGRDILAACGQLA 349 >UniRef50_C1E6J0 Predicted protein n=2 Tax=Micromonas RepID=C1E6J0_9CHLO Length = 395 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 142/366 (38%), Positives = 186/366 (50%), Gaps = 28/366 (7%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMY-HYCCDNFDEMTDINKVLRGKLKEVA-E 76 LL L ++RE + +R Q+ +Y + M + R L + E Sbjct: 41 TLLGLGLDELRELSAEFALPQWRGQQIHDAIYGEMRKTTIEGMQQLPLGFRQALVDAGYE 100 Query: 77 IRAPEVVEEQRSSDGTIK--WAIAVGDQRVETVYIPEDD------RATLCVSSQVGCALE 128 E VE DGT K + + G +E V IP + R T+CVSSQVGCA+ Sbjct: 101 TGRREPVEIVSDEDGTRKALFELRCGSI-IEAVGIPVERAKGRRRRFTVCVSSQVGCAMR 159 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 C FC+T +QGF RNL EI+ QV + G R TNVVMMGMGEPLLNL V Sbjct: 160 CSFCATGRQGFRRNLTSDEIVNQVLSMEDVFG-------RRATNVVMMGMGEPLLNLREV 212 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVP 247 + A + D G G R T+ST GV AL KL + LA+SLHAP E+R+ ++P Sbjct: 213 LRAHRCLNRDVGIG--GRYFTISTVGVPNALSKLAAHRLQATLAVSLHAPTQELRERLIP 270 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT---PC 304 K + ++ L VR Y A RVT EY +L ND +HA LA+LL+ C Sbjct: 271 SAKAFPLDALLEEVRMY---RKATGRRVTFEYTLLAGENDSEDHARALAKLLRSKVGRGC 327 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDAACGQLAGDVI 363 INL+PWNP GA + R S S ++RF VL + G + VR TRG AACGQL G Sbjct: 328 HINLLPWNPVAGANHQRPSKSAVNRFCDVLAAERGVSYSVRATRGLVAQAACGQLTGAFE 387 Query: 364 DRTKRT 369 ++ R+ Sbjct: 388 RKSSRS 393 >UniRef50_B7FZP4 Predicted protein (Fragment) n=2 Tax=Bacillariophyta RepID=B7FZP4_PHATR Length = 378 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 134/375 (35%), Positives = 198/375 (52%), Gaps = 36/375 (9%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 +T + +NL + + ++ G +RA QV W+ + MT++ K LR +L Sbjct: 9 STSNRVLNLSTVTQAELEILMVAWGHPKYRAQQVYNWIRQQGVTDVALMTNLPKTLRAQL 68 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIP-EDDRATLCVSSQVGCALEC 129 E ++ R+ E+ E S DGTIK A D Q +E+V +P +D R T C+SSQ GCA C Sbjct: 69 SEFSKPRSLEIAAEMVSKDGTIKRAYRCADGQMIESVLMPYKDGRYTACISSQAGCAQGC 128 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIV------------GAAKVTGQRP--ITNVVM 175 FC+T Q GF R L EI QV A + G ++ R ++NVV Sbjct: 129 VFCATGQMGFARQLTADEIFEQVAIFANELQQQKDQQQYIDAGGQEIQHGRATRLSNVVF 188 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG---DMIDVALAI 232 MGMGEPL N NVV A+ + +D G G R++T+ST G+VP + KL DM + LA+ Sbjct: 189 MGMGEPLANYRNVVKAVNRITNDLGIG--ARKITVSTVGIVPNIVKLTTDPDMPPIRLAV 246 Query: 233 SLHAPNDEIRDEIVPINKKY-NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 SLH +D+ R +++P N++Y ++ + A+R Y+E + R+T+E+ ++ ND + Sbjct: 247 SLHCASDKERSDLLPANRRYGGLDELMPALRDYIETTGR---RITLEWALIQGENDNADS 303 Query: 292 AHQLAEL-----LKDTPCKINLIPWNP---FPGAPYGRSSNSRIDRFSKVLMSYGFTTIV 343 A LA L L+ +N+IP NP F G P R + ++ F K L +G Sbjct: 304 ARTLASLVQRYGLRRDMVHVNVIPLNPTGGFEGTPTQRQN---VNVFVKTLEEHGIACTP 360 Query: 344 RKTRGDDIDAACGQL 358 R RG DIDA CGQL Sbjct: 361 RVRRGIDIDAGCGQL 375 >UniRef50_Q1AYW0 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RLMN_RUBXD Length = 355 Score = 207 bits (526), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 119/336 (35%), Positives = 179/336 (53%), Gaps = 12/336 (3%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQ 86 ++ E + GE P+R QV + +DE+ + K LR +L E+ Sbjct: 21 EVEEVLAERGEPPYRLRQVYAALAGSLASGWDEVASLPKGLREELAGRVPASVLELRRIS 80 Query: 87 RSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRV 145 R+ DGT K+ D +ETV IPE R T+C+S+QVGC + C FC+T G RNL+ Sbjct: 81 RARDGTRKYLFFTRDGHAIETVMIPERSRRTVCISTQVGCPMACTFCATGLLGIKRNLKA 140 Query: 146 SEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK 205 EI QV+ A+ + +V TNVV+MGMGEP LN + A+ ++ D GF L+ Sbjct: 141 REIAEQVFAVARDIAPERV------TNVVVMGMGEPFLNYRETLRALRVLNDRRGFNLAA 194 Query: 206 RRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRY 264 R + +STSG+V + + D + LAISLH P +E R ++P+ ++ I + A R Y Sbjct: 195 RHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERRRLMPVAARHPIPELMNAARYY 254 Query: 265 LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSN 324 +E++ + ++ EY +L VND HA LAELL +NL+ +N + + +S Sbjct: 255 VERT---RRKLFFEYTLLAGVNDRMRHAEALAELLDHPLYHLNLLRFN-WTDTGFSATSA 310 Query: 325 SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 R F + G + +R +RG DI+AACGQLA Sbjct: 311 RRAKEFLRRARELGLSATLRPSRGQDIEAACGQLAA 346 >UniRef50_B1ZVM5 Ribosomal RNA large subunit methyltransferase N 2 n=2 Tax=Opitutaceae RepID=RLMN2_OPITP Length = 428 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 130/376 (34%), Positives = 197/376 (52%), Gaps = 41/376 (10%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 NL D R ++R + P A ++ ++Y + F MT++ +R +L+ + Sbjct: 54 NLYDFTRAELRLWLSRRELNPVHAARIWSYLYLDLVEGFGAMTELPARVRARLEAEMCVG 113 Query: 79 APEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 ++ E S DG T K+ + + D +ETV + RAT CVSSQVGCA+ C FC+T Q Sbjct: 114 NLKIARETDSRDGFTRKYLLELADGAAIETVLMRFAGRATACVSSQVGCAMGCVFCATGQ 173 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAA--------------KVTGQRP------------- 169 G+ R+L EI+ Q A+ + A + G++ Sbjct: 174 MGYTRHLTAGEIVAQAVHVARALRTAAFEKCHVMRDPSPGREAGEKSRDEADRHRAPPTP 233 Query: 170 -ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMID 227 + N+V+MGMGEPL N V+ A++I+ DD G L R+TLST GVVP + +L + Sbjct: 234 RLRNLVLMGMGEPLHNYEAVMRAVDILRDDGGLALGAERITLSTVGVVPGILRLAAEKRP 293 Query: 228 VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVND 287 V LA+SLHA + E R +VP+ KK+ ++ +AA R Y E + RV E+ +++ ND Sbjct: 294 VHLAVSLHAADQEERAALVPVAKKWPLDELMAACRTYSETTGR---RVFYEWTLIEGRND 350 Query: 288 GTEHAHQLAELLKDTPCKINLIPWNP---FPGAPYGRSSNSRIDRFSKVLM-SYGFTTIV 343 HA + LL+ P ++NLIP NP + G P GR+ +R RF ++L + + V Sbjct: 351 TAAHARAVGRLLRGLPAQVNLIPLNPTAGYDGTP-GRTEAAR--RFQEILSREFALPSTV 407 Query: 344 RKTRGDDIDAACGQLA 359 R+ RG DI A CGQLA Sbjct: 408 RQRRGIDIAAGCGQLA 423 >UniRef50_D1N5Y0 Radical SAM enzyme, Cfr family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5Y0_9BACT Length = 344 Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 183/336 (54%), Gaps = 19/336 (5%) Query: 28 MREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP--EVVEE 85 +RE+ K FR Q+ W+Y + M ++ +R + E AP V E Sbjct: 14 LREWAKSHDLPAFRGTQIADWVYKKGIVEPERMNNLPLPVRELIGN--EFLAPGTAVTET 71 Query: 86 QRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLR 144 S DGT K + + D + +E V IP ++R T C+S+QVGC ++C+FC++ + G RNL Sbjct: 72 AGSGDGTEKLLLTLQDGETIEMVLIPAEERLTFCLSTQVGCPVQCRFCASGRDGLIRNLA 131 Query: 145 VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLS 204 EI+ + ++G ++ G+RP N+V MG+GE LLN + +E++ GFG+S Sbjct: 132 AGEILEEF-----LLGCSRA-GRRP-DNLVFMGIGEGLLNFRELAATLEVLSSPEGFGMS 184 Query: 205 KRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRR 263 RR+T+STSG VP + K ++ + LAISLHAP+DE R ++P +Y + +AA Sbjct: 185 PRRITVSTSGYVPGMLKFAELEREFTLAISLHAPDDETRSRLIPDKLRYPVAEIMAAADL 244 Query: 264 YLEKSNANQGR-VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRS 322 YL K+ GR VT+EY +L+ ND HA L L CK+NLIP+N G + R Sbjct: 245 YLRKA----GRMVTLEYTLLEGFNDTPPHARALGALAVRHRCKVNLIPYNS-TGGEFRRP 299 Query: 323 SNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 S I F + + + G VR RG AACGQL Sbjct: 300 SRQAIREFEETVAAAGAHVTVRVERGAKSVAACGQL 335 >UniRef50_B1ZQZ5 Ribosomal RNA large subunit methyltransferase N 1 n=3 Tax=Verrucomicrobia RepID=RLMN1_OPITP Length = 355 Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 132/353 (37%), Positives = 191/353 (54%), Gaps = 25/353 (7%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 +L +L+ + G K A +V++ Y C E+T+ + L E I Sbjct: 4 SLAELSVDDLASVLAQWGYKRSHAGRVLREYYARC----GELTEAGRPWPAGLLERLRIE 59 Query: 79 -AP---EVVEEQRSSDGTIKWAIAVGDQR-VETVYIPE--DDRATLCVSSQVGCALECKF 131 AP + Q ++DGT K + + D R VE V +P+ DRA C+SSQVGCA+ C F Sbjct: 60 FAPGGTALAARQVAADGTTKLLLRLADGRTVEAVLMPDYRADRAAGCLSSQVGCAMGCDF 119 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+TAQ GF RNL E++ Q + +A R + VV MGMGEPLLNL+ V+ A Sbjct: 120 CATAQSGFERNLTAGEMVEQFLALRREAASAG----RKLQTVVFMGMGEPLLNLDAVLTA 175 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINK 250 + + D+ GL R+VT+ST G+VP +D L + + LA+SLHAP+D R ++P + Sbjct: 176 VRRIADNTYGGLGWRQVTVSTVGLVPGIDALTAADLGINLAVSLHAPDDATRAALLPAGR 235 Query: 251 KYNIETFLAAVRRYLEKSNANQGR-VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 ++ I LAAV R+ A++GR V I+Y +L VND HA LA ++ +NL+ Sbjct: 236 RFAIADILAAVDRF----QASRGRPVIIQYCLLKGVNDSAAHARMLAAVIGSRRMHVNLL 291 Query: 310 PWNP----FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +NP G Y S + +F L + G T +R++RG DIDAACGQL Sbjct: 292 HYNPTGLSLRGVRYEPSGDEAAAQFLAELRARGVVTHLRRSRGPDIDAACGQL 344 >UniRef50_A9V4C5 Predicted protein n=2 Tax=Fungi/Metazoa group RepID=A9V4C5_MONBE Length = 1527 Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 187/344 (54%), Gaps = 44/344 (12%) Query: 49 MYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTI-KWAIAVGD-QRVET 106 + H N ++ ++ K L ++E + +V+E+ S+D T K I + D ++ET Sbjct: 608 ILHNGVTNVRDIPELPKKLYQVIEEKFALTTSRLVKEETSADNTTTKLLIELQDGAQIET 667 Query: 107 VYI----------PED---------------DRATLCVSSQVGCALECKFCSTAQQGFNR 141 V + PED +RAT+CVSSQVGC + C FC+T G Sbjct: 668 VIMRYGRFELRNFPEDAQKKSSDGEVSFVSKERATVCVSSQVGCQMGCTFCATGTMGLMS 727 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 NL EI+ Q++ A ++ I NVV MGMGEPL N + V A+ M D F Sbjct: 728 NLAAGEILEQLYHANQV---------EKIRNVVFMGMGEPLDNYDAVRFAVSAMTDVRRF 778 Query: 202 GLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 L ++++ST GVVP + ++ DM DV LA+SLHAPN E+R+EIVP + ++++ + A Sbjct: 779 SLGASKISVSTVGVVPRIHQMVEDMPDVGLALSLHAPNQELREEIVPSGRSWHLDRIMEA 838 Query: 261 VRRYLEKSNANQGR----VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 + + E R + IEYV++D VN E AHQL LLKD +N+IP+NP Sbjct: 839 IDHFQETRQETSRRRRTHILIEYVLIDEVNSTEEVAHQLGHLLKDRDVLVNVIPYNP-TD 897 Query: 317 AP--YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 P Y S + DRF++++ SYG TI+R+ G D++AACGQL Sbjct: 898 VPHDYKPPSRATTDRFNEIVRSYGLRTIIRQELGQDVNAACGQL 941 >UniRef50_B3DX07 Radical SAM family enzyme n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX07_METI4 Length = 314 Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 114/310 (36%), Positives = 177/310 (57%), Gaps = 23/310 (7%) Query: 81 EVVEEQRSSDGTIK--WAIAVGDQRVETVYIPEDD------RATLCVSSQVGCALECKFC 132 E++ E++S DGT K W + G +ETV IP D R TLCVS+QVGCAL C FC Sbjct: 2 ELIHEKQSIDGTKKFLWQLCDGHA-IETVLIPATDSRGSSERLTLCVSTQVGCALGCHFC 60 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL EI+ QV + IV ++ ++++V MGMGEPLLN + ++ ++ Sbjct: 61 ASGLLGFKRNLSCGEIVEQVLLSESIV-------KQRVSHIVFMGMGEPLLNYDQLIKSI 113 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 ++ +G G+S R++T+STSG+ P + KL + + LA+SLHA DE+R +I+PIN K Sbjct: 114 RLISSSWGIGISPRKITISTSGIAPRIRKLALETLPFRLAVSLHATTDELRSKIMPINSK 173 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + + + + + + ++T+EY+++ +ND E A +LA + K+NLIP+ Sbjct: 174 YPLSELIKSCEEFCSR---RKQKITLEYILISGLNDRREDAERLARIATSLRAKVNLIPY 230 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL-AGDVIDRTKRTL 370 NP + F + L + +RK RG DID ACGQL + +R+K Sbjct: 231 NPIERLAWKSPDQKEQLSFFRWLKNKAVQVSIRKERGRDIDGACGQLRLRYLFERSKEP- 289 Query: 371 RKRMQGEAID 380 K M GE ++ Sbjct: 290 -KGMLGEGLN 298 >UniRef50_D2VS80 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VS80_NAEGR Length = 482 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 116/275 (42%), Positives = 161/275 (58%), Gaps = 24/275 (8%) Query: 103 RVETVYI---PEDD----RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQ---- 151 +VE VYI P+ R T+C+SSQVGC+L CKFC T RNL SEI+ Q Sbjct: 177 KVEAVYIYHPPKASDSFGRGTVCLSSQVGCSLNCKFCRTGTAPIERNLLASEIVSQLVSV 236 Query: 152 --------VWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 ++ + A + + + N+V MG GEPL N NV A+EI+ D G G+ Sbjct: 237 KHRLMDFPIYMTEEERKRASIE-KSFVNNIVFMGEGEPLYNYKNVKKAIEILSD--GCGI 293 Query: 204 SKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRR 263 SKR++ +STSGV + + + + V LAISLHA +E+RD IVPINK + +E +R Sbjct: 294 SKRKIIVSTSGVCNLIPDVVNDLGVNLAISLHATTNELRDNIVPINKIFPLEVLFETLRE 353 Query: 264 YLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSS 323 K+N +T EYVML+HVND + A +L +L+KD PC +NLI +N + G+ + SS Sbjct: 354 QCFKNNNRH--ITFEYVMLNHVNDFIDDAKRLVKLVKDIPCSVNLIAFNEWEGSGFECSS 411 Query: 324 NSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + RI+ FSK L G + VR ++G DI ACGQL Sbjct: 412 DERIEEFSKYLYKNGISAPVRHSKGQDILGACGQL 446 >UniRef50_A4RXU8 Predicted protein n=2 Tax=Ostreococcus RepID=A4RXU8_OSTLU Length = 369 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 134/368 (36%), Positives = 196/368 (53%), Gaps = 31/368 (8%) Query: 19 NLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYC-CDNFDEMTDINKVLRGKLKEVAE 76 +LL ++ + ++ D G+ +RA Q+ + +Y C ++ + I + +R L Sbjct: 12 DLLGMSARALKSIVVDECGQPLYRATQIREHLYGARRCRRIEDFSLIPREMRDALVAGGY 71 Query: 77 IRAPEVVEEQRSSD-GTIKWAIAVGDQRV-ETVYIPE----------DDRATLCVSSQVG 124 VE S GT K ++ VG++ V E V IP+ ++R T CVSSQVG Sbjct: 72 RTGRLAVESASVSGCGTGKVSLRVGEREVIEAVGIPDASCWRASAEAENRLTACVSSQVG 131 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 CA++C FC+T QG+ RNL +EI QV ++ G + ++ VV MGMGEP+LN Sbjct: 132 CAMKCTFCATGMQGYKRNLTPAEITAQVIELEELYG-------KRVSQVVFMGMGEPMLN 184 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRD 243 + +VV A+ + +D G G R +T+ST G+ +L KL + + + LAISLHAP+ R Sbjct: 185 IKSVVQAIRCLNEDVGIG--GRHITVSTVGIPNSLKKLAKEKLAITLAISLHAPDQHTRA 242 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--- 300 +IVP K Y +E L R Y +++ RVT EY +L VND A L+ +LK Sbjct: 243 KIVPSAKYYPMEDLLNDARAYFKETGR---RVTFEYTLLAGVNDSPSQAKALSRMLKRKF 299 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 T +N+IPWN G + R S + I RF L G T +R+TRG D +AACG L G Sbjct: 300 GTGAHVNIIPWNNIDGINHTRPSGNAIHRFCAQLEG-GVTHTIRRTRGLDTNAACGMLTG 358 Query: 361 DVIDRTKR 368 RT R Sbjct: 359 AFERRTLR 366 >UniRef50_A6DL87 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DL87_9BACT Length = 343 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/290 (41%), Positives = 165/290 (56%), Gaps = 12/290 (4%) Query: 76 EIRAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIP-EDDRATLCVSSQVGCALECKFC 132 EI +++ Q S DG K + D +ETV + R +LC+SSQ GC +C FC Sbjct: 56 EIPQLKIISRQDSKIDGASKLLVQTEDGLNIETVILRIGTGRTSLCISSQAGCTEKCTFC 115 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 STA GF RNL ++EIIGQV A +I+ R + N+V MGMGEPL N +NV+ ++ Sbjct: 116 STATLGFKRNLTLAEIIGQVILAGEILRKE----DRKVRNIVFMGMGEPLRNTDNVLKSL 171 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKK 251 EIML GLS +RVT+ST G+ + KL +V LA+SLHA ND++RD ++PINK Sbjct: 172 EIMLSSAYMGLSSKRVTVSTIGITDNITKLRHSFPEVNLALSLHASNDQVRDILMPINKT 231 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + +ET + L G + I+Y+++ +ND E A +LA LK C INLIP+ Sbjct: 232 FPMETIKETL---LSAQELASGDLMIQYLLIKDLNDSPEQAQELAAFLKGINCIINLIPY 288 Query: 312 NPFPG-APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 N G + SS ++ F VL F R + G DIDAACGQLA Sbjct: 289 NDSMGMGNWKCSSEEKMSAFQDVLQESDFQVTRRHSLGRDIDAACGQLAA 338 >UniRef50_UPI0001698B51 radical SAM enzyme, Cfr family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B51 Length = 220 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 106/216 (49%), Positives = 146/216 (67%), Gaps = 7/216 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 + NL++L+++ M F +LG K F V KW++ +F++MTDI+K LR +L+ +AE Sbjct: 3 ETNLMELDQRSMERCFVELGSKAFHGRNVFKWIHKQGVIDFNQMTDISKRLRVQLESLAE 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 IR PE+V EQ + DGT KW + + D QR+ETVYIP+ +R+T+CVSSQVGCAL C FCST Sbjct: 63 IRLPELVFEQPARDGTRKWVLQLDDGQRIETVYIPDGERSTICVSSQVGCALNCSFCSTG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 GF + + G +R +G V P TN+V+MGMGEPL N + VV AM+IM Sbjct: 123 SPGF----QPQSLGGGDYRPG--LGWPAVNWWHPPTNIVLMGMGEPLANFDAVVTAMDIM 176 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALA 231 DD + LSK RVT+STSG+VPAL +L ++ DV+LA Sbjct: 177 QDDSAYMLSKYRVTISTSGIVPALRQLREVSDVSLA 212 >UniRef50_A9FD89 Probable RNA methyltransferase sce1580 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=Y1580_SORC5 Length = 398 Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 154/281 (54%), Gaps = 8/281 (2%) Query: 81 EVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 E+ E + D T++ + GD +E+V IP R TLCVSSQVGCA C FC T + G Sbjct: 115 EIAERAPAQDDTLRLVLRAGDGALIESVLIPGPARTTLCVSSQVGCARACSFCETGRLGL 174 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 R L EI+ QV R A+ + A + G P+ N+V MGMGEP NL V+ A+ ++ D Sbjct: 175 ERQLAAGEIVDQV-RIARALAAER--GGAPLRNLVFMGMGEPFDNLGEVLKAIRLLTDPR 231 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 F + VT+ST GV ++ LA+SL+AP+D R I+P+N ++++ Sbjct: 232 AFRFAPSHVTVSTVGVADKIEPFFRDARAELAVSLNAPDDARRQAIMPVNARFSMAALKE 291 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPY 319 A+ R L RV EYV+ D ND E A LA + C++N+IP NP P Sbjct: 292 AIARALPPGR----RVLFEYVLFDRFNDAPEDADLLAAYVAGLRCRVNVIPCNPGPDPAL 347 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 S +R+D F L +G TT+VR+ RG D+ ACGQLAG Sbjct: 348 RPPSAARLDAFVARLSGHGVTTLVRRPRGRDVGGACGQLAG 388 >UniRef50_C1EEM6 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EEM6_9CHLO Length = 375 Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 131/355 (36%), Positives = 186/355 (52%), Gaps = 23/355 (6%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHY-CCDNFDEMTDINKVLRGKLKE 73 D NLL + +++ F ++ G FR Q+ +Y N D++ + K R +L + Sbjct: 19 DPSYNLLGMTLPELKTFAEEAGLPKFRGKQLRDHLYGVKPAKNIDDLVTLPKAARRQLLD 78 Query: 74 VAEIRAPEVVEE-QRSSDGTIKWAIAVGDQRV-ETVYIPEDD----RATLCVSSQVGCAL 127 VV S DGT K + + D RV ETV IP + R T CVSSQVGC + Sbjct: 79 AGVSVGRSVVHHVAGSPDGTTKLLLRLHDDRVVETVGIPAHEAGHRRLTACVSSQVGCPM 138 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C FC+T + GF RNL EI+ QV V + G+R +T++V MGMGEPLLN+ N Sbjct: 139 RCTFCATGKGGFARNLATHEIVDQV------VSLEEHFGER-VTHIVFMGMGEPLLNVPN 191 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIV 246 V+ A E + + G G R +T+ST GV A+++L + LAISLHAPN E+R+ ++ Sbjct: 192 VLRAHEALNKEVGIG--SRHITISTVGVRGAIERLARAKLQSTLAISLHAPNQELRERLI 249 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KDTPC 304 P K Y ++ L ++Y A RVT EY +L VND + A +L LL Sbjct: 250 PSAKAYPMQELLNDAQQYF---IATGRRVTFEYTLLAGVNDSIQQAEELGRLLYKNKLAS 306 Query: 305 KINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +N+IP+NP AP + R + I F L +R++RG + AACGQL Sbjct: 307 HVNIIPYNPVDDAPDFKRPGRASILNFRNTLEQMNVPASIRQSRGLEAAAACGQL 361 >UniRef50_B9CLR1 Radical SAM enzyme, Cfr family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLR1_9ACTN Length = 361 Score = 200 bits (508), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 111/345 (32%), Positives = 182/345 (52%), Gaps = 12/345 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K L L+ ++ E ++LG+ FRA Q+ WM+ +FD+M+++ K LR L + Sbjct: 21 KRGLKTLSHAEIVELVENLGQPKFRAKQLEDWMWSKGATSFDQMSNLPKSLRAGLAKTVS 80 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 ++ V Q S DG+ K+ + D VE V +P ++ +C S+Q GCA+ C FC+T Sbjct: 81 FQSITQVTRQLSQDGSRKYLLQYPDNVCVECVGMPTGNKLAVCASTQAGCAMGCAFCATG 140 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G R+L SEI QV + + +++VV MG GEP +N +N + A+ ++ Sbjct: 141 AAGLTRSLSASEIYDQVLHI-------RNDFEMRVSSVVFMGQGEPFMNYDNALEALRLL 193 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNI 254 G G+ R +T+ST GV+P + + + + LA+SLH+ + RD ++P +KY++ Sbjct: 194 NSPHGLGIGARHLTISTCGVIPMIKRFANEPEQFTLAVSLHSAVQKTRDILMPGVRKYSL 253 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + Y+EK+ R T EY ++ +ND L + + T +NLI N Sbjct: 254 LHLYDIMGEYVEKTGR---RPTYEYALIGGINDSENELGALRDFCRGTLAHVNLIQLNEI 310 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 PG+ + S+ +R +F L G +R +RG DIDAACGQL+ Sbjct: 311 PGSKFHPSTPARAQQFVTKLGEVGVEATIRISRGADIDAACGQLS 355 >UniRef50_C8W8J4 Radical SAM enzyme, Cfr family n=3 Tax=Coriobacteriaceae RepID=C8W8J4_ATOPD Length = 372 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 115/355 (32%), Positives = 185/355 (52%), Gaps = 13/355 (3%) Query: 7 TPENVTTKDG-KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINK 65 TP++ K K +L L+ +Q+ + LG+ FRA Q+ +W++ +FD+M+++ K Sbjct: 21 TPDSRPQKTAAKSDLRSLSSEQILDLVTSLGQPKFRAKQIEEWIWSKGATSFDQMSNLPK 80 Query: 66 VLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVG 124 LR +L + + E V Q S DG+ K+ + D VE V +P ++ ++C S+Q G Sbjct: 81 TLREELSKQVILAGAEQVVRQVSEDGSRKYLLRYPDGTSVECVGMPNGNKLSVCASTQAG 140 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 CA+ C FC+T G R+L SEI QV +T+VV+MG GEP +N Sbjct: 141 CAMGCAFCATGASGLTRSLSASEIYEQVMHVRDDFDTR-------VTSVVLMGQGEPFMN 193 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRD 243 + + AM + G G+ R +T+ST GV+P + + + LA+SLH+ + RD Sbjct: 194 YDATLTAMRRLNSPDGAGIGARHITVSTCGVIPMIKRFASEPEQFTLAVSLHSAVQKTRD 253 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP 303 ++P +KY++ + Y++K+ R T EY ++ VND L + + T Sbjct: 254 ALMPGVRKYSLIHLYDIMGEYVDKTGR---RPTYEYALIKGVNDSDNELGALRDFCRGTL 310 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 C +N+I N G+ + +S +R F L S G +R +RG DIDAACGQL Sbjct: 311 CHVNIIQLNEIEGSKFHPTSPARAQEFVNSLNSVGVEATIRLSRGSDIDAACGQL 365 >UniRef50_A4S5T8 Predicted protein n=7 Tax=Viridiplantae RepID=A4S5T8_OSTLU Length = 254 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 154/235 (65%), Gaps = 8/235 (3%) Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC TA+ G +NL ++I+ QV +A ++VGA++V+ NVV MGMGEPL N++ Sbjct: 1 MNCQFCYTAKMGLRKNLSAAQIVEQVVQARRMVGASEVS------NVVFMGMGEPLHNVD 54 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIV 246 V+ A+ I+LD G G S+ +VT+STSG+VP +++ + +LA+SL+A D IR+ I+ Sbjct: 55 EVLKAVSILLDPKGLGFSRNKVTVSTSGLVPQMERFLRESEASLAVSLNATTDYIRNWIM 114 Query: 247 PINKKYNIETFLAAVRRYLEKSNA--NQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 PIN+KYN+E L +RR + + +Q +V EY+ML+ VND E A +L E+ +D PC Sbjct: 115 PINRKYNLEMLLGLLRREFPRQSLGRHQRQVFFEYIMLEGVNDSDEDADRLVEIARDIPC 174 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 KINLI +N G+ + S RI+ F + + G T +R++RGD+ +ACGQL Sbjct: 175 KINLIYFNTHDGSEFKCSDQERINAFRQRVSDAGVTCTIRQSRGDEEMSACGQLG 229 >UniRef50_Q6MED6 Ribosomal RNA large subunit methyltransferase N 1 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RLMN1_PARUW Length = 358 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 110/287 (38%), Positives = 161/287 (56%), Gaps = 14/287 (4%) Query: 85 EQRSSDG-TIKWAI-AVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRN 142 Q +DG T K+ I + D +++V IP TLC+SSQ+GC + C FC T + G RN Sbjct: 73 SQNLTDGQTGKFLIKTIDDLDIKSVLIPMQAGGTLCISSQIGCQMGCAFCETGRMGLLRN 132 Query: 143 LRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFG 202 L EI+ Q++ AK + N+V MGMGEP N + V+ A I+ D GFG Sbjct: 133 LTTQEILSQLF-------IAKFRLHFSVRNIVFMGMGEPFDNYDTVMHAFRILTDSHGFG 185 Query: 203 LSKRRVTLSTSGVVPALDKLGDMIDVA--LAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 L R+T+STSG + + +L LA+SL+APNDE+R++++PINKKY ++ A Sbjct: 186 LGNNRITISTSGCLEGIYRLLQETTPLPNLAVSLNAPNDELRNKLMPINKKYPLKELYQA 245 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYG 320 + + ++++ +V I YV++ ND EHA QL L KINLIP+NP + Sbjct: 246 IYDFCKQTSK---QVLIAYVLIKEQNDSIEHAKQLTNFLSGLNVKINLIPYNPQSRDRFQ 302 Query: 321 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 S ++ F+ L GF T++R+T+G I AACGQL + R K Sbjct: 303 SPEQSTLENFTSYLREKGFYTLLRQTKGQKIMAACGQLGNLELKRKK 349 >UniRef50_B9EX01 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9EX01_ORYSJ Length = 363 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 172/351 (49%), Gaps = 58/351 (16%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA-EIR 78 LL L+ +R+ DLG++ +R Q+ +Y E + + KV R L ++ Sbjct: 36 LLGLSEPDLRQLAVDLGQQSYRGKQLHDLLYKSRAKQIQEFSHVPKVFREALVGAGWKVG 95 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----RATLCVSSQVGCALECKFC 132 V +SDGT K + + D R +ETV IP DD R T CVSSQVGC L C FC Sbjct: 96 RSPVHHAVTASDGTTKILLKLEDNRLIETVGIPVDDDKGPSRLTACVSSQVGCPLRCSFC 155 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T + GF RNL EI+ QV A + T Q +TNVV MGMGEP+LNL +V+ A Sbjct: 156 ATGKGGFARNLHAHEIVEQVL-------AIEETFQHRVTNVVFMGMGEPMLNLKSVLEAH 208 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 + + G +R +T+ST GV + KL + LA+SLHAPN ++R+ IVP Sbjct: 209 RCLNKELKIG--QRMITISTVGVPSTIKKLASHKLQSTLAVSLHAPNQKLRETIVPTG-- 264 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC----KIN 307 +ND EHA +LAELL C +N Sbjct: 265 ---------------------------------INDAKEHAEELAELLHT--CGGGYHVN 289 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 LIP+NP G+ Y R + F L + T VR+TRG D +AACGQL Sbjct: 290 LIPYNPIQGSEYKRPYRKVVQAFVDALEARKITVSVRQTRGLDANAACGQL 340 >UniRef50_Q9LJN3 Gb|AAF41683.1 n=13 Tax=Magnoliophyta RepID=Q9LJN3_ARATH Length = 382 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/262 (42%), Positives = 155/262 (59%), Gaps = 26/262 (9%) Query: 110 PEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 P R+TLC+SSQVGC + C FC+T GF NL EI+ Q+ A++I Sbjct: 110 PGGIRSTLCISSQVGCKMGCTFCATGTMGFKSNLTSGEIVEQLVHASRIAD--------- 160 Query: 170 ITNVVMM----------GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL 219 I N+V M GMGEPL N N VV A+ +ML+ F LS +R+T+ST G+V A+ Sbjct: 161 IRNIVFMLLPWFDDCDQGMGEPLNNYNAVVEAVRVMLNQ-PFQLSPKRITISTVGIVHAI 219 Query: 220 DKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIE 278 +KL D+ V+LA+SLHAP EIR +I+P + + ++ + A++ + + S Q ++ IE Sbjct: 220 NKLHNDLPGVSLAVSLHAPVQEIRCQIMPAARAFPLQKLMDALQTFQKNS---QQKIFIE 276 Query: 279 YVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG-APYGRSSNSRIDRFSKVLM-S 336 Y+MLD VND +HAH L ELLK INLIP+NP + + SS + RF K+L + Sbjct: 277 YIMLDGVNDQEQHAHLLGELLKTFQVVINLIPFNPIGSTSQFETSSIQGVSRFQKILRET 336 Query: 337 YGFTTIVRKTRGDDIDAACGQL 358 Y T +RK G DI ACGQL Sbjct: 337 YKIRTTIRKEMGQDISGACGQL 358 >UniRef50_C8PSX7 Radical SAM enzyme, Cfr family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSX7_9SPIO Length = 348 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 170/323 (52%), Gaps = 15/323 (4%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV 99 F++ Q+ +W+ C +F EMT++ R +L V R + DGT+K I + Sbjct: 32 FQSVQIFQWIARGC-TSFAEMTNLPLKERERLASVYTPRNTVCETVLKDPDGTVKLGIGL 90 Query: 100 GD-QRVETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAK 157 D +ETV + + +R T CVS QVGC + C FC T Q G RNL +EI+ Q K Sbjct: 91 YDGSSIETVLLFDKHERRTACVSCQVGCPMGCTFCQTGQLGCLRNLSPNEIVEQFLHLEK 150 Query: 158 IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVP 217 I G + N+V MGMGEPLLNL+++ + ++ G LS RR+TLSTSG+ Sbjct: 151 ICGK--------LDNIVFMGMGEPLLNLDSIAKTIAVLTHPKGRNLSHRRITLSTSGICK 202 Query: 218 ALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 + +L + +D+ LA+SL ++ +R ++P+ K + A+R + +K++ RVT Sbjct: 203 GIYELAERQLDIRLAVSLTTADEALRTTLMPVTKANPLSELKKAIRYFNDKTDK---RVT 259 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMS 336 +E +L VN + A Q+ + + INLIPWNP PY S+S I F L + Sbjct: 260 LELALLKDVNTSYKAAQQVRDFAEGLNVHINLIPWNPVQQLPYSTPSDSEIRSFYNYLTA 319 Query: 337 YGFTTIVRKTRGDDIDAACGQLA 359 VR+ RG I ACGQL Sbjct: 320 ENLNVTVRQKRGRTIGGACGQLG 342 >UniRef50_A6DSV2 YloN n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSV2_9BACT Length = 345 Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 118/345 (34%), Positives = 188/345 (54%), Gaps = 13/345 (3%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +NR++++ + FRA Q+ + + + +FD++T+ K LR KL E ++ V Sbjct: 1 MNRERIQTIVDEYKLPKFRAKQLKEAFFEHHYSSFDQLTNFPKDLRNKLTEENQVLCLTV 60 Query: 83 VEEQRSSDG-TIKWAIAVGDQ-RVETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQGF 139 + SSD T K + + D ++E+V + P+ T C+SSQVGCA++C FC+T G Sbjct: 61 NKVFASSDQVTYKALLELHDGLKIESVLMSPKPGLWTACISSQVGCAMKCSFCATGTMGL 120 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL EI QV + + + R + NVV MGMGEPL N V ++E + + Sbjct: 121 TRNLTSEEISDQVLFWRQFIAKNDIDTDR-LNNVVYMGMGEPLHNTKEVFSSIEELTAED 179 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F + R +++STSG++ + ++ + V LA+SLHA DE+R I+PINK +++E Sbjct: 180 SFKIGSRHISVSTSGLLKGVKEMAEKFPQVNLALSLHAAKDELRSSIMPINKAFDLEKIR 239 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP----CKINLIPWNPF 314 + Y++ ++ +V IEYV+L+ N+ HA +L++ LK NLI +N Sbjct: 240 TCLDEYIDSTHR---KVFIEYVLLEGENNELSHAVELSKFLKSLKRPELTHTNLIVYNET 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 G S+ + D+F L S G + +RK G DID ACGQLA Sbjct: 297 DSEHKG-STKQKADQFRNHLKSKGLSVTIRKNLGRDIDGACGQLA 340 >UniRef50_B2S216 Ribosomal RNA large subunit methyltransferase N n=3 Tax=Treponema RepID=RLMN_TREPS Length = 340 Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 116/322 (36%), Positives = 162/322 (50%), Gaps = 15/322 (4%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV 99 FR QV +W+ C D F M+D++ R +L I V R DGT+K I + Sbjct: 25 FRGVQVFRWIAAGCTD-FHAMSDLSSETRARLARACVISDTRVYTTLRDVDGTLKLGIEL 83 Query: 100 GDQR-VETVYIPED-DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAK 157 D+R VE V + + R T C+S QVGC + C FC T Q GF RNL SEI+ Q + Sbjct: 84 KDKRRVEAVLLVDQVSRKTACLSCQVGCPMACAFCQTGQLGFARNLSASEIVEQFLHLER 143 Query: 158 IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVP 217 VG + NVV MGMGEP+LNL+ V A+EI+ G LS++R+T+STSG Sbjct: 144 CVGT--------LDNVVFMGMGEPMLNLDAVCRAIEILSHPQGRDLSEKRITISTSGHCR 195 Query: 218 ALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 + L D + V LA+SL N +R ++P ++ +A+R + EKS RVT Sbjct: 196 GIYSLADRALQVRLAVSLTTANAPLRARLMPRAAHDSLAKLKSAIRYFNEKSGK---RVT 252 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMS 336 +E ++ VN HA ++ + +NLIPWNP + + F +LM Sbjct: 253 LELALMRGVNTSERHAQEVIDFAHGLNVHVNLIPWNPVASIHFETPREVEVAHFEALLMR 312 Query: 337 YGFTTIVRKTRGDDIDAACGQL 358 R RG+ I ACGQL Sbjct: 313 ARIPVTRRYQRGNGIGGACGQL 334 >UniRef50_C0QD94 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QD94_DESAH Length = 342 Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 110/350 (31%), Positives = 188/350 (53%), Gaps = 19/350 (5%) Query: 18 INLLDLNRQQMREF-FKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +NLL++ +++ + + G + A +++ + NF + + L V++ Sbjct: 1 MNLLEMTFKEVSQLLYNGFGRGDYHAGALLREVIKRGNHNFSTAPEFERSQGMSLALVSD 60 Query: 77 IRAPE-VVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCST 134 P+ V +Q D T+K+ + D +E+V IP TLCVS+Q GC + C+FC T Sbjct: 61 YELPDFTVVDQMEEDNTVKFVTRLHDGCSIESVIIPMKQYNTLCVSTQAGCRMGCRFCET 120 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 A+ GF RNL+V EI GQ++ A +G + I+N+V MGMGEP N +N+V ++ + Sbjct: 121 ARSGFKRNLQVHEITGQLFSARNTLG-------KKISNIVFMGMGEPFDNFDNLVRSIRV 173 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLG--DMIDVALAISLHAPNDEIRDEIVPINKKY 252 D GF ++ R +T+ST G+VP + L + ++LA+S+H+ DE+R ++P+N++Y Sbjct: 174 FNDQKGFDVAFRHMTVSTCGLVPGIRALAGLGLTQLSLAVSVHSAIDEVRSVLMPVNRRY 233 Query: 253 NIETFLAAVRRY-LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + AA+ Y L K + +EYV++ VND E A L + L ++NLI + Sbjct: 234 PLNVLRAALADYPLHKRRY----ILVEYVLIKGVNDSQEAAAALVQYLVPLKVRVNLIAY 289 Query: 312 NPF--PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 NP P + + +++F+ L G I R ++G + A CGQL+ Sbjct: 290 NPGRDPDPEFQGVDDCSMNQFASWLEDSGLFVIKRWSKGQKLMAGCGQLS 339 >UniRef50_A8I3K8 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I3K8_CHLRE Length = 368 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 126/368 (34%), Positives = 184/368 (50%), Gaps = 36/368 (9%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFDEMTDINKVLRGKLKEV 74 ++ L +L ++ E+ +GE P RA Q+ +W+Y N D+ G K Sbjct: 1 RVMLKNLPLPELEEWCASVGEPPKRAKQLYRWLYGNRKWIRNLDQADSDASAFSGAFKAK 60 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIA-VGDQR------------VETVYIP------EDDRA 115 ++ + DGT K A VGD VETV IP ++ R Sbjct: 61 VLAGGLQLQSVHTARDGTRKLVFALVGDWEGGDGPAGSARGTVETVLIPMTNRQGQNLRY 120 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 T C+S+QVGCA+ C+FC T + G NL ++I+ QV A + + +V Q PI N+V Sbjct: 121 TACLSTQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRYLAEQEV--QIPIANIVF 178 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLH 235 MGMGEPL N + V+ A+EI+ G LS+ ++ +ST G+VP + + I+ Sbjct: 179 MGMGEPLHNYDAVMSAIEILAT--GLELSRNKIIVSTVGLVPEMRRF---------IASG 227 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRR-YLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 +RD IVP N++Y ++ L A+R + V IEYV+L VND A + Sbjct: 228 RAKLAVRDWIVPTNRRYPLDQLLGALREAFPYGKRKGDDFVVIEYVLLAGVNDTLADAER 287 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 L L D C +NLI +NP G + RSS+ + F V ++ G VR ++GDD AA Sbjct: 288 LLALTSDIYCLVNLIVFNPHDGTQFKRSSDDDVRAFRAVFLAAGRPCTVRASKGDDEMAA 347 Query: 355 CGQLAGDV 362 CGQL GDV Sbjct: 348 CGQL-GDV 354 >UniRef50_D1VSE2 Radical SAM enzyme, Cfr family n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE2_9FIRM Length = 348 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/342 (31%), Positives = 181/342 (52%), Gaps = 19/342 (5%) Query: 27 QMREFFKDLGEKPFRADQVMKWMY---HYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVV 83 +++++ EK FRA+Q+ + + + +N + K+L+ E+ I+ ++ Sbjct: 10 ELKDYLSSKSEKSFRANQLYTFFHKNKRWDIENSNLSKSTLKILQND--EINTIKILKIF 67 Query: 84 EEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRN 142 Q D T K+ + D V E V + + C+S+QVGC + C FC++ + G RN Sbjct: 68 --QSKLDDTKKFLFTLDDSNVIEGVLMKYSFGYSQCISTQVGCRMGCAFCASTKDGLFRN 125 Query: 143 LRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFG 202 L +E++ QV+ G + N ++MG GEPL N +NV+ ++I+ G Sbjct: 126 LTPAEMLNQVYIVENYFGIN-------VKNFILMGSGEPLDNFDNVIKFLKILHSKEGHN 178 Query: 203 LSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAV 261 S R +T+ST GVV + KL D + + LA+SLH ND R +I+PIN+KYN+ A+ Sbjct: 179 TSYRNITISTCGVVDGIYKLIDSALPINLAVSLHQTNDLERSKIMPINRKYNLNKLKKAL 238 Query: 262 RRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGR 321 Y K+ + R+T EY ++ ND ++ ++L E+ ++ C INLIP NP R Sbjct: 239 EDYNLKT---KNRITFEYTLIKGKNDTLKNVNELKEMFQNLFCHINLIPLNPIEEYNEQR 295 Query: 322 SSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 + I++F ++L F VR+ G DIDA+CGQL ++ Sbjct: 296 PNRQDINKFKRLLEDASFNVTVRRELGSDIDASCGQLRASLL 337 >UniRef50_B0SGA8 Ribosomal RNA large subunit methyltransferase N n=6 Tax=Leptospira RepID=RLMN_LEPBA Length = 353 Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 116/343 (33%), Positives = 191/343 (55%), Gaps = 20/343 (5%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVE 84 ++++ E LG + +RA Q+ +Y D+ T ++K +R KLKE + E+ Sbjct: 13 KKELEEICVSLGLEKYRAAQIYTGIYKSRYTTIDQFTTLSKEVREKLKEHTQYPEIEIGR 72 Query: 85 EQRSS-DGTIKWAIAVGDQR-VETVYIPEDD--RATLCVSSQVGCALECKFCSTAQQGFN 140 + S DGT K+ VG+ + +E V+IP D R T+C+SSQ+GC L CKFC+T + Sbjct: 73 DLVSKEDGTRKFTFYVGENKEIEAVWIPSGDGGRKTICISSQIGCTLNCKFCATGLLEYK 132 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 NL+ +I+ QV + ++VG TN+V MGMGEP+ N +V+ A I+ D Sbjct: 133 GNLQTWQILDQVLQVERLVGDRA-------TNIVFMGMGEPMHNYFSVMKAAHILRDKDA 185 Query: 201 FGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 FGL R+T+ST+GV +++ + + AISL+ PN R ++ +N K+ +E + Sbjct: 186 FGLGALRITISTAGVTTGINRFIENKEPFNFAISLNHPNPNARSSVMDVNDKHPLEKLID 245 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD-TPCKINLIPWNP-FPGA 317 + +R+ ++ + +T EYVM+ VN G ++A +LA++ + CKIN+IP N F G Sbjct: 246 SAKRFTKELDR---AITFEYVMIPDVNMGRDNAERLAKIARSVNKCKINVIPLNTDFTG- 301 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIV-RKTRGDDIDAACGQLA 359 + R ++ + F L + I+ R++ G DI+ ACG LA Sbjct: 302 -WRRPTDDEVKDFVMHLKAKTTAPILNRRSPGRDINGACGMLA 343 >UniRef50_B8CKQ7 Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKQ7_SHEPW Length = 137 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 83/124 (66%), Positives = 100/124 (80%), Gaps = 1/124 (0%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 +DL+R+ MR F D+GEKPFRADQ+MKW+YH+ +F++MT+INK LR KL EI AP Sbjct: 1 MDLDRKSMRALFADMGEKPFRADQLMKWLYHFGVSDFEQMTNINKALRAKLARKCEIVAP 60 Query: 81 EVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 ++ Q+S+DGTIK+AI VG+ Q VETVYIPEDDRATLCVSSQVGCALEC FCST QGF Sbjct: 61 KIASYQKSADGTIKFAIDVGNGQEVETVYIPEDDRATLCVSSQVGCALECTFCSTGAQGF 120 Query: 140 NRNL 143 NR L Sbjct: 121 NRKL 124 >UniRef50_B5JDK5 Radical SAM enzyme, Cfr family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDK5_9BACT Length = 342 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 107/276 (38%), Positives = 156/276 (56%), Gaps = 14/276 (5%) Query: 90 DGTIKWAIAVGD-QRVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSE 147 DG K D +++ETV + R ++CVSSQVGC +C+FC+T + GF RNL+ E Sbjct: 72 DGATKLLFETPDGKKIETVILRIATGRTSICVSSQVGCTEKCRFCATGELGFFRNLKSEE 131 Query: 148 IIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRR 207 I+ QV +A +I+ + R + N+V MGMGEPL N +N+V AM+ +L + F +R Sbjct: 132 ILDQVVQAGRILASE----DRSLRNIVFMGMGEPLRNYDNLVAAMDQLLSEHVFKFVPKR 187 Query: 208 VTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLE 266 +T+S+ G+ + K V+LA+SL+ ND R E++PIN +Y +A +R LE Sbjct: 188 ITVSSLGIPELIVKFAQRFPQVSLALSLNGSNDAARSEVMPINNRYP----MADLRSMLE 243 Query: 267 K-SNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP--FPGAPYGRSS 323 + +G V IEY+M +ND E A ++A L+ INLIP+NP + SS Sbjct: 244 QLETIREGIVMIEYIMFKDLNDSVEDAAKVAAFLRGLAVHINLIPYNPDYSLNKSFLPSS 303 Query: 324 NSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 I+ F L S G+ R + G DI AACGQLA Sbjct: 304 IETIEAFKNHLQSEGYKVTRRFSLGQDIAAACGQLA 339 >UniRef50_C1EAY2 Predicted protein n=3 Tax=Eukaryota RepID=C1EAY2_9CHLO Length = 485 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 126/313 (40%), Positives = 166/313 (53%), Gaps = 19/313 (6%) Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPED-DRATLCV 119 I K R ++ E + + + Q S DG T K + + D RVE+V + D R TLCV Sbjct: 66 IPKFARDQIPERFALITTTIADCQTSKDGSTTKMVVELQDGHRVESVVMRHDKGRVTLCV 125 Query: 120 SSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKI-------VGAAKVTGQ-RPIT 171 SSQVGC + C FC+T G NL EI+ Q+ A ++ G +V+G + Sbjct: 126 SSQVGCKMGCTFCATGTLGELGNLTSGEILEQLVHANRLFNDDGTGAGLRRVSGTAHGVR 185 Query: 172 NVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVAL 230 N+V MGMGEPL N + VV A+ M D F L+ RVT+ST GVVP + +L D V L Sbjct: 186 NLVFMGMGEPLNNYDAVVGAIGPMTDPNAFALAPSRVTVSTVGVVPKMRRLVRDAPGVCL 245 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 A+SLHAPN +R++IVP Y + L+A+ YL + + R IEY +L VND TE Sbjct: 246 ALSLHAPNQRLREKIVPTATAYKLPDILSALDEYL--ATGPKVRTMIEYCVLGGVNDTTE 303 Query: 291 HAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRID--RFSKVLMSYGFT--TIVRKT 346 A +L EL++ +NLIP+NP P G S D VL F T VR Sbjct: 304 CARELGELMRHRDVIVNLIPYNP-TATPMGHSPPKMEDVRAMCAVLTGPEFNQFTTVRHE 362 Query: 347 RGDDIDAACGQLA 359 G DI ACGQLA Sbjct: 363 MGQDISGACGQLA 375 >UniRef50_B1C5S5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S5_9FIRM Length = 342 Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 115/325 (35%), Positives = 172/325 (52%), Gaps = 16/325 (4%) Query: 37 EKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI-RAPEVVEEQRSSDGTIKW 95 E FRA Q+ KW+Y + DEMT+++ LR KLKE I + + T K+ Sbjct: 22 EPKFRAKQIFKWLYDSYVKSIDEMTNLSLSLREKLKEEYYINHLKLEKKFKEEKSSTTKF 81 Query: 96 AIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWR 154 + D +E V + + ATLCVS+Q GC + C FC + + G RNL EI+ +++ Sbjct: 82 LLKTEDDILIECVLLRYEAGATLCVSTQAGCRMGCVFCESGKCGLIRNLTKGEILNEIYL 141 Query: 155 AAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG 214 ++I I+N+V+MG GEPL N + VV ++++ D +SKR +TLST G Sbjct: 142 VSEIEDI-------RISNIVLMGSGEPLDNYDEVVGFLKLVTDVNTLNMSKRSITLSTCG 194 Query: 215 VVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG 273 + + L D +D+ LA+SLHAP E+R+ ++PI K NIE L A Y K+ Sbjct: 195 IKDKIYSLADSGLDINLALSLHAPFHEMRESMMPIEKANNIEEVLDATFYYRSKTGR--- 251 Query: 274 RVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKV 333 R+T EY +++ ND E +L +L K T IN+I N + R ++ I F Sbjct: 252 RITYEYCLIEGKNDTIECIDKLYDLFKGTDSLINVIGVND---SSKKRVNDKYIHAFVDK 308 Query: 334 LMSYGFTTIVRKTRGDDIDAACGQL 358 L + G +R+ G I+AACGQL Sbjct: 309 LRNKGINVTIRRRLGSSINAACGQL 333 >UniRef50_B7FTW5 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTW5_PHATR Length = 296 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 120/293 (40%), Positives = 156/293 (53%), Gaps = 21/293 (7%) Query: 83 VEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDR--ATLCVSSQVGCALECKFCSTAQQGF 139 V E ++DGT K + + D +VETV IP D+R +TLCVSSQVGC C FC T + G Sbjct: 1 VHESVAADGTTKLLLQLVDGLQVETVIIPWDERQRSTLCVSSQVGCRQACTFCLTGRMGI 60 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 R+L EI+ QV A + A + PI N+V MGMGEP N + VV A ++ Sbjct: 61 LRSLSADEILVQVLLAKR---ACRENNIYPIDNIVFMGMGEPADNTDAVVRAANVLTHQQ 117 Query: 200 GFGLSKRRVTLSTSGVVP-ALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F L+ RR+T+ST P A KLG VALA S+HA + +R E+VP KY +E Sbjct: 118 QFQLTPRRITISTVAPSPDAFLKLGKA-PVALAWSVHASREAVRRELVP-TTKYTMEELR 175 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE----LLKDTP---CKINLIPW 311 + L + + +E +LD +ND E A LA+ LLK P +NLIPW Sbjct: 176 EGYIKALLDRSRSMRTTMLEVTLLDKINDSLEDAEHLADFCQPLLKSVPGIKLVVNLIPW 235 Query: 312 NPF-----PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 N P + Y + + RI F K L+ G VR TRGDD AACGQLA Sbjct: 236 NDISASFGPASVYRKPTTERIGEFQKALIGRGILCYVRTTRGDDEGAACGQLA 288 >UniRef50_A8I8N2 Predicted Fe-S-cluster redox enzyme n=1 Tax=Chlamydomonas reinhardtii RepID=A8I8N2_CHLRE Length = 502 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 124/394 (31%), Positives = 186/394 (47%), Gaps = 71/394 (18%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPF--RADQVMKWMY-------------------HY 52 + G++ L L ++ + GE RA Q+ +WMY + Sbjct: 89 QQGRLVLKALTLPELEAWCAAQGEAAPANRALQIWRWMYADPPAGSWVRSLEETMGRQNG 148 Query: 53 CCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV-----GDQRVETV 107 F E + L G LK +RA SDGT K + +ETV Sbjct: 149 FAAKFVEKVGPHVSLEGGLKLSQVVRA---------SDGTRKLVFTLLGGEAAGGSIETV 199 Query: 108 YIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ 167 IP VGCA+ C+FC T + G NL ++I+ QV A + + A+ + Sbjct: 200 LIP-----------VVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRFL--AQEGDR 246 Query: 168 RPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID 227 P+TN+V MGMGEPL N V+ A +I+ G +S ++T+ST G+VP + + Sbjct: 247 TPLTNLVFMGMGEPLHNTEAVLAAADIVSHYLGLHISHNKITISTVGLVPEMRAVLARTR 306 Query: 228 VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSN------------------ 269 V +A+SLHA DE+RD IVP+N++Y++ T AA+ K Sbjct: 307 VQVALSLHATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEEEAAIGSLSSSDEAAAAAA 366 Query: 270 ----ANQGR-VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSN 324 + +GR + +EY ML +ND + AH+LA++L+ CK+NLI +NP G + S++ Sbjct: 367 GKGSSKEGRSLLVEYTMLHGINDTLDDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTD 426 Query: 325 SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 I F L+ G +R +RGDD AACGQL Sbjct: 427 EDISAFRSALIRSGMVCTIRDSRGDDEMAACGQL 460 >UniRef50_B2KDX7 Radical SAM enzyme, Cfr family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDX7_ELUMP Length = 343 Score = 176 bits (447), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 122/345 (35%), Positives = 187/345 (54%), Gaps = 17/345 (4%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +N +++++F K+ G +R QV +Y ++++ + L+ KLK+ I + Sbjct: 1 MNFEKIKDFIKENGFPAYRIAQVKDAVYKNGITDWNKAVALPADLKNKLKDNFNILSFTA 60 Query: 83 VEEQRS-SDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 + Q S D T K + + D ++ETV + D T+CVS+QVGC + C FCST + F Sbjct: 61 AKMQFSDKDRTAKALLKLEDGLKIETVLMRMGDVWTVCVSTQVGCPVGCSFCSTGKMRFK 120 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 R+L EI QV + K+ QR I NVV MGMGEPL N N V A++ + + Sbjct: 121 RDLTDEEISDQVLFWLSYIKQEKL-AQR-INNVVFMGMGEPLFNYLNTVKAVKEISNPDR 178 Query: 201 FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 G+ R +++STSGV L D+ V LA+SLH+ +D+ R++IVP+N+K+N+ET Sbjct: 179 LGIGMRHISISTSGVADKFHNLAVDLPQVNLALSLHSADDDERNKIVPLNRKFNLETLQK 238 Query: 260 AVRRYLEKSNANQGR-VTIEYVMLDHVNDGTEHAHQLAELLKDTP----CKINLIPWNPF 314 A+ Y+ A GR V IEY +++ VND EH L + + +NLI N Sbjct: 239 ALTEYI----AMTGRQVFIEYTVVEGVNDRPEHIRLLGKWISGVKDNYLLHVNLIACNMG 294 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 G +S ++ F+K L + +RK+ G+DI AACGQLA Sbjct: 295 KGKT---TSEKQVKLFAKGLQGLHISVTIRKSLGNDILAACGQLA 336 >UniRef50_B0MQA1 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQA1_9FIRM Length = 345 Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 34/345 (9%) Query: 33 KDLGEKPFRADQ---VMKWMYHYCCDNFDEMT----DI-----NKVLRGKLKEVAEIRAP 80 K L E FRA Q + + +Y FDEMT DI +K GKLK Sbjct: 14 KLLTENGFRATQCANIFRDIYKRRASGFDEMTLTSADIKAFLSDKYFFGKLK-------- 65 Query: 81 EVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 ++E S T K+ + D RVETV + + ++C+S+Q GC + CKFC + + Sbjct: 66 --IDEILQSVDTSKYLFELSDGCRVETVLMRQKFGNSICISTQSGCNMGCKFCCSGRLRK 123 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 R+L E++ Q+ K +T I N+ +MG+GEP N + + ++I+ Sbjct: 124 QRDLTAGEMVSQILAVEK---HQNIT----IGNITVMGIGEPFDNYDALCDFLDIVTVPG 176 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G + +T+ST G+ + + LA+SLHAP+DEIR+ ++P+N++Y+I + Sbjct: 177 GIETGTKHITVSTCGLCDKTKLFAERKEPCNLAVSLHAPDDEIRNRLMPVNRRYSISQVI 236 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 + + Y+E++N +V +EY++LD +ND E+A QLA L+ + +NLIP+NP P + Sbjct: 237 ESAKYYVERTNR---KVLLEYILLDGINDSRENARQLAALIGNARLFVNLIPYNPSPDSE 293 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 + RSS I F L RK G ++ AACGQL D I Sbjct: 294 FKRSSEENITAFYDELKKNRINVTRRKEFGTELSAACGQLRSDRI 338 >UniRef50_B7S3M1 Predicted protein n=2 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7S3M1_PHATR Length = 471 Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 159/284 (55%), Gaps = 21/284 (7%) Query: 86 QRSSD-GTIKWAIAVGD-QRVETVYI-------PEDDRATLCVSSQVGCALECKFCSTAQ 136 Q S+D T K A+ + D Q VE+V + + RA+LCVSSQ GCA+ C FC+T Sbjct: 90 QTSADRSTTKLAVQLHDGQLVESVLMRYVSTATSNNSRASLCVSSQCGCAMGCTFCATGT 149 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G + NL EI+ Q+ + + NVV MGMGEPL N +NVV A ++ Sbjct: 150 MGLSGNLTAGEILEQI----------PLPKLDLVRNVVFMGMGEPLDNYSNVVEACRALI 199 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D + L+ RVT+ST G+V + KL ++ +V+LA+SLHAPN + R IVP K Y +E Sbjct: 200 DRQRWNLAHGRVTVSTVGLVSQIRKLTAELPEVSLALSLHAPNQQDRQAIVPTAKHYPLE 259 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + A+ +++ + IEYVML+ E AHQL +L ++ +NLIP+N Sbjct: 260 DLIDALDQHMMAYLQKRTNPMIEYVMLEGPTSTLECAHQLGKLCENRHLVVNLIPYNQTN 319 Query: 316 GAPYGRS-SNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 R S ++ F ++++SYG +RKT G DID+ACGQL Sbjct: 320 VRDVLRCPSREHMEEFREIVVSYGSFCTIRKTMGADIDSACGQL 363 >UniRef50_A4RV36 Predicted protein (Fragment) n=3 Tax=Viridiplantae RepID=A4RV36_OSTLU Length = 298 Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 115/287 (40%), Positives = 151/287 (52%), Gaps = 20/287 (6%) Query: 81 EVVEEQRSSDGTIKWAI---AVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 +V E RS DGT I A GD V R TLCVSSQVGC + C FC+T Sbjct: 19 KVRHESRSGDGTTTKMIVELAGGDVVEACVMRHAKGRTTLCVSSQVGCKMGCTFCATGTL 78 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G NL EI Q+ A++ G A + NVV MGMGEPL N NV+ A+E M Sbjct: 79 GELGNLSAGEICEQLAHASR--GDA-------VRNVVFMGMGEPLNNYRNVIDAIEAMTS 129 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 D GFGLS ++T+ST GV+P + L D LA+SLHAPN +R +IVP Y +E Sbjct: 130 DKGFGLSPAKITVSTVGVIPRMRTLRRDAPGTRLALSLHAPNQALRQKIVPTATAYKLED 189 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 +A + ++ ++ + + IEY +L VND A +L LL+ +NLIP NP Sbjct: 190 LMATLDEHM--ASGPKMKTMIEYCVLGGVNDDEACARELGALLRGKEVIVNLIPLNPT-D 246 Query: 317 APYGRSSNSR--IDRFSKVLMS--YGFTTIVRKTRGDDIDAACGQLA 359 P G +R + + ++L S + T VR G DI ACGQLA Sbjct: 247 TPAGHVPPTREAVQKMLEILTSPEFDLFTTVRHEMGQDIAGACGQLA 293 >UniRef50_B4U5N7 Radical SAM enzyme, Cfr family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5N7_HYDS0 Length = 340 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 32/351 (9%) Query: 18 INLLD--LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 INLL+ N +Q L + +R Q+ W + + + MTDI K LR +LK Sbjct: 2 INLLEDYFNLEQ------KLNLEKYRISQIKSWAFKKKITDIELMTDIPKSLRQELKIDF 55 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 + + + E + + K+ D VE+V I E D TLC+S+Q+GCA+ CKFC + Sbjct: 56 HVLSLDSFLE---GEDSTKFVFKTKDGYFVESVLIKEKDHYTLCISTQIGCAVGCKFCVS 112 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNL SEI+ Q + + + I N+V MGMGEPL N N+ A I Sbjct: 113 TIGGLLRNLSFSEIVDQYFYIS-------ILRNTFIRNIVFMGMGEPLANFENLKKASFI 165 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD---MIDVALAISLHAPNDEIRDEIVPINKK 251 L + F LSKR +T+STS + KL + + + LAISL+A +DE R ++P N Sbjct: 166 FLKE--FELSKRHITISTSAYTNYIKKLKEDSFLNKLNLAISLNASDDETRKALMP-NVI 222 Query: 252 YNIETFLAAVRRY-LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT--PCKINL 308 +++ ++ Y LE + R+TIEYV++ +N + A L LLK+ K+NL Sbjct: 223 GSLKELFEILKTYPLEP----RRRITIEYVLIKDINSSLKDAKNLVNLLKNLKHKTKVNL 278 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 IP+N P + R S I RF + L+ + +R ++G ++ AACG L+ Sbjct: 279 IPYNENPMLSFERPVESDIYRFQQELLKNDISCTIRWSKGLELAAACGHLS 329 >UniRef50_A7GH77 Ribosomal RNA large subunit methyltransferase cfr n=26 Tax=root RepID=CFR_CLOBL Length = 344 Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 112/342 (32%), Positives = 174/342 (50%), Gaps = 23/342 (6%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL-KEVAEIRAPEVVEE 85 +M++ +L +R +Q+ K ++H DNFD+M + KVLR L E + + + Sbjct: 10 KMKQIVSNLKLPDYRYEQLTKAIFHQRIDNFDDMHILPKVLRMSLVNEFGKNVSSVIPVF 69 Query: 86 QRSSDGTIKWAIAVGD-QRVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGFNRNL 143 + S K + D +R+E V + + + C+SSQ GC C+FC+T GF RNL Sbjct: 70 SQDSKQAQKLLFELTDGERIEAVGLKYKQGWESFCISSQCGCGFGCRFCATGSAGFKRNL 129 Query: 144 RVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 EI Q+ + ++ MGMGE N + A++I+ D FGL Sbjct: 130 TADEITDQLLYF--------YFNDHRLNSISFMGMGEAFAN-PELFDAVKILTDQNLFGL 180 Query: 204 SKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 S+RR+T+ST G++P + L V LA SLH+P + R +++PINK++ L V Sbjct: 181 SQRRITISTIGIIPGIQSLTQKFPQVNLAFSLHSPFESQRSDLMPINKRFP----LNQVM 236 Query: 263 RYLEKSNANQG-RVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-----KINLIPWNPFPG 316 + L++ + G RV I Y+ML+ +ND EHA + LLK+ I+LIP+N Sbjct: 237 KTLDEHIIHTGRRVFIAYIMLEGINDSKEHAEAVVGLLKNRGSWEHLYHIDLIPYNSTDK 296 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + S++ I +F L G + VR G +I AACGQL Sbjct: 297 TTFKFQSSNAIKQFCSTLKKAGISATVRTQFGSEISAACGQL 338 >UniRef50_Q01GU0 Radical SAM domain-containing protein-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01GU0_OSTTA Length = 406 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 119/354 (33%), Positives = 171/354 (48%), Gaps = 48/354 (13%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHY---CCDNFDEMTDINKVLR 68 + DG ++LL L ++++ + G FR Q+ +Y + DE T ++K LR Sbjct: 81 ASADGGVSLLGLTKRELEALAVERGMPKFRGKQMADHLYAANGTSARSVDEFTTLSKALR 140 Query: 69 GKLKEVA-EIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCAL 127 +L + V ++DGT K + + D RV Sbjct: 141 AELVAAGVRVGRSSVHHVAAATDGTAKLLLRLDDDRV----------------------- 177 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 GF RNL EI+ QV + + GQR +TNVV MGMGEPLLN+ N Sbjct: 178 ------VETGGFARNLAPHEIVDQV------LALEEHFGQR-VTNVVFMGMGEPLLNVPN 224 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIV 246 V+ A E++ + G G R +T+ST GV +++KL + LA+SLHAPN E+R+ I+ Sbjct: 225 VLKAHEVLNKEIGIG--ARHITISTVGVRGSIEKLAYAQLQSVLAVSLHAPNQELRETII 282 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KDTPC 304 P K Y +E L +Y A RVT EY +L VND EHA +L LL ++ Sbjct: 283 PSAKVYPMEDLLQDCEQYF---IATGRRVTFEYTLLGGVNDQPEHAKELGRLLYARNLAS 339 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +NLIP+NP A + R S + + F VL +R+TRG + AACGQL Sbjct: 340 HVNLIPYNPVDDADFKRPSRATVYAFRDVLEQERVPASIRQTRGLEAAAACGQL 393 >UniRef50_B8ZNC2 Radical SAM superfamily protein n=7 Tax=Streptococcus RepID=B8ZNC2_STRPJ Length = 300 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 114/356 (32%), Positives = 170/356 (47%), Gaps = 69/356 (19%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L Q M+E+ + GEK FRADQ+ +W+Y +F+EMT+++K L KL + Sbjct: 2 KPSIHSLVHQTMQEWVLEQGEKKFRADQIWEWLYRKRVQSFEEMTNLSKDLIAKLNDQFV 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + Q S+DGT+K+ + D +ETV + + ++CV++QVGC + C+ Sbjct: 62 VNPLKQRIVQESADGTVKYLFELPDGMLIETVLMRQHYGLSVCVTTQVGCNIG---CTFC 118 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G + R +LNN +IM Sbjct: 119 ASGLIKKQR---------------------------------------DLNNGEIVAQIM 139 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 L F + + V LA+SLHAPN+E+R + IN+ + IE Sbjct: 140 LVQKYFA--------------------DEGVQVNLAVSLHAPNNELRSSTMKINRAFPIE 179 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP--CKINLIPWNP 313 AA+ Y+E +N RVT EY+ML+ VNDG E A +LAELLK+ +NLIP+NP Sbjct: 180 KLFAAIEYYIETTNR---RVTFEYIMLNEVNDGVEQALELAELLKNIKKLSYVNLIPYNP 236 Query: 314 FPGA-PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 Y RS R+ F L G +VR+ G DIDAACGQL + + R ++ Sbjct: 237 VSEHDQYSRSPKERVLAFYDTLKKKGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQ 292 >UniRef50_Q136A2 Probable RNA methyltransferase RPD_2859 n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Y2859_RHOPS Length = 359 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 136/256 (53%), Gaps = 15/256 (5%) Query: 104 VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK 163 VE+V I D T C+SSQVGCA C+FC++ Q G RNL EI+ QV R V Sbjct: 98 VESVLIRRFDGHTACISSQVGCAFACRFCASGQAGLMRNLEAGEIVEQVVRLGPKV---- 153 Query: 164 VTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG 223 +V MG+GEPL N V+ A+ I+ D G +TLST G+ AL +L Sbjct: 154 -------NRIVFMGIGEPLNNYQQVLKAIRILRDRQGMNFPTTGITLSTIGIPKALKQLR 206 Query: 224 D-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 + + + L ISLHA E+RD ++P +K+ + + + + N VT Y++L Sbjct: 207 EEHLAINLTISLHATTQEVRDRLIPGARKHPLGEVVERACAWARRHNRP---VTFAYLVL 263 Query: 283 DHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTI 342 +ND A +LA +L+D+P ++NL+ WNP G R+ + + F L + + Sbjct: 264 PGINDSIADARRLAAMLRDSPARVNLMRWNPVDGVGLQRTPDRSLAHFRTTLENALVPVV 323 Query: 343 VRKTRGDDIDAACGQL 358 VR T+G DI AACGQL Sbjct: 324 VRDTQGRDISAACGQL 339 >UniRef50_Q7UPG1 Probable RNA methyltransferase RB6963 n=2 Tax=Planctomycetaceae RepID=Y6963_RHOBA Length = 379 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 94/247 (38%), Positives = 139/247 (56%), Gaps = 9/247 (3%) Query: 114 RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNV 173 R TLCVSSQ+GCA C FC+T + G +NL EI+ QV +A +I+ R ++N+ Sbjct: 99 RTTLCVSSQIGCAAACDFCATGKMGIAKNLATEEILDQVVQAGQILRGE----DRRLSNI 154 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAI 232 V MGMGEPL N NV A+E++ F S V +ST GV + +L ++ LA+ Sbjct: 155 VFMGMGEPLHNEVNVTEAIELLTAPDHFARSPSTVLVSTVGVPAGMLRLAKRFPNLNLAL 214 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 SLH+ + R++I+P+ KK ++ A+ E IEY+ML VND + A Sbjct: 215 SLHSADQTTREKIIPLGKKASLAQLHDAIH---EIQTIQDREFMIEYLMLRDVNDSAKDA 271 Query: 293 HQLAELLKDTPCKINLIPWNPFPGAPY-GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI 351 +L + + D +NLIP+N +P+ SS I+ F+ +L + G T VR + G+DI Sbjct: 272 DRLIDWIGDLRVHVNLIPYNTIEASPHLHASSRPVIESFADILKASGLKTTVRYSLGNDI 331 Query: 352 DAACGQL 358 +AACGQL Sbjct: 332 EAACGQL 338 >UniRef50_Q5WJ42 Ribosomal RNA large subunit methyltransferase cfr n=8 Tax=Firmicutes RepID=CFR_BACSK Length = 350 Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 109/346 (31%), Positives = 175/346 (50%), Gaps = 22/346 (6%) Query: 26 QQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL-KEVA-EIRAPEVV 83 ++++ F L E +R Q+ + ++ + F++MT + K LR L E I E V Sbjct: 11 ERLKHFLNALNEPTYRYKQITEAIFKHRIGAFNKMTTLPKALRESLINEFGPSILTVEPV 70 Query: 84 EEQRSSDGTIKWAIAVGDQRVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGFNRN 142 E S T G+ +VE V + E + C+SSQ GC L C FCST G +N Sbjct: 71 LETTSQQVTKVLLKVAGNNQVEAVRMHYEAGWESFCISSQCGCGLGCTFCSTGAIGLKQN 130 Query: 143 LRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFG 202 L E+ Q+ + G + +V MGMGE L N+ + A+ +++D F Sbjct: 131 LSADEMTDQLLYFY-------LKGH-SLDSVSFMGMGEALANV-RIFDALNVLVDRQLFA 181 Query: 203 LSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAV 261 LS RR+T+ST G++P + ++ + L SLH+P + R E++PIN KY ++ + + Sbjct: 182 LSPRRITVSTVGIIPNIQRMTSSFPQMNLTFSLHSPFHDQRSELMPINNKYPLDQVMNVL 241 Query: 262 RRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP----CKINLIPWNPFPGA 317 +++ ++ +V I YVML VND +HA L + + + +NLI +NP G Sbjct: 242 DQHIHETGR---KVYIAYVMLRGVNDSEKHAEALVKRILNNRYPHLYHVNLIRYNPTVGT 298 Query: 318 P--YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P YG++ ++ F +V+ S +R G +IDAACGQL G Sbjct: 299 PENYGQTIEEKLQTFYRVVKSARIPVTIRSQFGREIDAACGQLYGQ 344 >UniRef50_B6AEB0 Radical SAM domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AEB0_9CRYT Length = 529 Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 119/430 (27%), Positives = 184/430 (42%), Gaps = 109/430 (25%) Query: 32 FKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDG 91 F++L A +V +++ F ++ DI K + +++ ++ +V+ + DG Sbjct: 24 FRELKVSESHAYRVWRYLIQKNVKEFSDIPDIPKRILEEIQLNFKLLTSNIVQSHTTDDG 83 Query: 92 -TIKWAIAVGD-QRVETVY-------------------------IPEDDRATLCVSSQVG 124 T K I + D +ETV +P R +LCVSSQ+G Sbjct: 84 NTTKLIIRLQDGHEIETVIMRYDRCNDVAKKSENKNLDTLEVPNLPIYRRVSLCVSSQIG 143 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C + C FC+T G +L EII QV+ A I+ P+ NVV MGMGEPL N Sbjct: 144 CRIGCTFCATGTLGLGGSLVTGEIIEQVYHAINILN-------EPVKNVVFMGMGEPLEN 196 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRD 243 N VV A++I+LD +GLS ++++ST G+ + + D+ V L +SLHAP+ +R+ Sbjct: 197 YNEVVDAIKILLDTRLYGLSPSKISISTVGIPSGIVNMADDLPGVGLCLSLHAPDQVLRE 256 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQ------------------------------- 272 +IVPI K Y I + + ++ KS N+ Sbjct: 257 QIVPIAKMYKISELIRSTDIFIAKSILNKFIKKITDQRNNRTEIKIDNLESTIISPKWFN 316 Query: 273 --GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK------------------------- 305 V IEY+++ VND HA LA LL +T Sbjct: 317 SHSTVMIEYILIKDVNDSINHAKALANLLNNTYTDKNDINMIFERCIQSERLEKKVAKSF 376 Query: 306 ---------------INLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD 349 +N++P++ P Y S ++ F ++L +YG VR+ G Sbjct: 377 QKAFLDNYKRSNFIFVNILPYSETNATPKYATPSEGKVRTFCRILNNYGIVVTVRRKMGQ 436 Query: 350 DIDAACGQLA 359 DI ACGQLA Sbjct: 437 DIGGACGQLA 446 >UniRef50_C1ZMH3 23S rRNA m(2)A-2503 methyltransferase n=3 Tax=Planctomycetaceae RepID=C1ZMH3_PLALI Length = 273 Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 145/259 (55%), Gaps = 14/259 (5%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQ 86 ++ ++ ++ G +RA Q+ + ++ F EMT++ LR L + EVV Q Sbjct: 12 ELVQWCQEQGLPTYRAGQIQQQIFPNRATQFGEMTNLPAKLRELLAATFTLLPSEVVAHQ 71 Query: 87 RSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRV 145 + D T K + + D VE V + EDDR T+C+S+QVGC + C FC++ G RNL Sbjct: 72 IAKDRTEKLLLQLHDGSLVECVLMREDDRRTICISTQVGCGMGCVFCASGLLGLKRNLTT 131 Query: 146 SEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK 205 EI+ QV R +++ A +TNVV+MGMGEPL NL N++PA++ + D G GL Sbjct: 132 GEILEQVLRLDRLLPA-----DEKLTNVVVMGMGEPLANLKNLLPALDRLTADDGLGLGA 186 Query: 206 RRVTLSTSGV---VPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 RR+T+ST G+ + L + G + LA+SLHAP E+R ++VP+NK IE L A Sbjct: 187 RRITVSTVGLPEKIRELAQTGHQFN--LAVSLHAPEAELRTKLVPVNKNIGIEAVLEAAD 244 Query: 263 RYLEKSNANQGRVTIEYVM 281 Y + RV+ EYV Sbjct: 245 DYFAITGR---RVSYEYVF 260 >UniRef50_C1E2Q2 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1E2Q2_9CHLO Length = 368 Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 125/380 (32%), Positives = 187/380 (49%), Gaps = 53/380 (13%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 + LD++ ++ F +D G K + ++ F+ D++ L++ + Sbjct: 2 SFLDID--EVERFARDRGIKKSSLRLCYRELFRRGKSTFENAPDVSARDMKLLRDNFTVC 59 Query: 79 APEVVEEQRSSDGT-IKWAIAVGDQR-VETVYIPE----DD------------------- 113 EVVE + + DG+ K + + D + VETV I DD Sbjct: 60 TSEVVETKTTEDGSGAKMVVRLHDGKLVETVVIGHSRSVDDGDGDETRGDGEDADVSDGA 119 Query: 114 -----RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR 168 R T+CVSSQVGCA+ C FC T G NL EI QVW A + G+ TG R Sbjct: 120 KNRVFRNTVCVSSQVGCAMGCTFCETGTLGLMANLTAGEICEQVWHARNLCGS---TGVR 176 Query: 169 PITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMID 227 NVVMMGMGEPL N V+ A+ M F + +R VT+ST GV ++ +L D + Sbjct: 177 ---NVVMMGMGEPLDNYEEVLIALRAMTHQAVFDMRQRSVTVSTVGVPASIRRLADDAPN 233 Query: 228 VALAISLHAPNDEIRDEIVP--INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHV 285 V LA+SLHAP ++R ++P + + ++R + +KS IEY+++D V Sbjct: 234 VGLALSLHAPTQDLRATLLPSAAGTSHTLGRLTESLRYHRQKSGRG---AMIEYIVIDGV 290 Query: 286 NDGTEHAHQLAELLKDTPCKINLIPWNPFP-GAPYGRSS--NSRIDRFSKVLM-SYGFTT 341 ND HA +L EL + +NLIP+NP G +G S + ++R + +L +G Sbjct: 291 NDSPTHARELGEL---SGYFVNLIPYNPTDVGGTHGYRSPADDALERMASILGDEFGVKA 347 Query: 342 IVRKT--RGDDIDAACGQLA 359 VR + RG ++D ACGQLA Sbjct: 348 KVRWSTRRGREVDGACGQLA 367 >UniRef50_Q2IHD1 Probable RNA methyltransferase Adeh_4229 n=4 Tax=Anaeromyxobacter RepID=Y4229_ANADE Length = 338 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 110/309 (35%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 60 MTDINKVLRGKLKEVAEIRAP---EVVEEQRSSDGTIKWAIAVGDQ-RVETVYIP-EDDR 114 + D V R L EV + P ++E + DG K+ + D RVETV IP D Sbjct: 37 LRDARNVRRSVLDEVDALATPGELRLLESVDAKDGFRKYLFELPDGLRVETVRIPLYDTH 96 Query: 115 ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 +C+SSQ GCAL C FC+TA+ G +R+LR E++ Q+ A + +RPIT VV Sbjct: 97 HVVCLSSQAGCALGCAFCATAKLGLDRSLRSWEMVSQLL-------AVRADSERPITGVV 149 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAIS 233 MG GEP LN + V+ A + D G + RR+++ST+GVVP + + + L IS Sbjct: 150 FMGQGEPFLNYDEVLAAAYALCDPAGARIDARRISISTAGVVPMIRRYTAEGHKFRLCIS 209 Query: 234 LHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 L+A R ++P+ + + ++ + A+R + A +GRVT+EYVM+ VN G E A Sbjct: 210 LNAAMPWKRRALMPVEQGFPLDELVEAIREH----AALRGRVTLEYVMISGVNVGEEDAA 265 Query: 294 QLAELLKDTPCKINLIPWNPFPG---APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 L LL P ++N I N G P N+ D ++ L G + R + G D Sbjct: 266 ALGRLLAGIPVRLNPIAVNDASGRYRPPDEDEWNAFRDALARELP--GTPVVRRYSGGQD 323 Query: 351 IDAACGQLA 359 AACG LA Sbjct: 324 EHAACGMLA 332 >UniRef50_Q1CYE1 Probable RNA methyltransferase MXAN_6459 n=2 Tax=Cystobacterineae RepID=Y6459_MYXXD Length = 358 Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 110/350 (31%), Positives = 170/350 (48%), Gaps = 19/350 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR---GKLKEV 74 +NL L+ Q++ L P +V ++ + + +++ +V R L+ Sbjct: 1 MNLKSLSLQELEAALAPLSPSPAAVRKVFAAVFAHGAQSVEDVASARQVPRRVGDHLRAH 60 Query: 75 AEIRAPEVVEEQRSSDGTIKWAI--AVGDQRVETVYIP-EDDRATLCVSSQVGCALECKF 131 AE+ +VE +R+ DG +K+ +G R+E V IP D++ +CVSSQVGCAL C F Sbjct: 61 AEMPKLAIVERRRADDGFVKYLFDSPLGG-RIEAVRIPIFDEKYVICVSSQVGCALACDF 119 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C T + GF RNL+ EI+ QV + + RP+ VV MGMGEPLLN + A Sbjct: 120 CMTGKLGFKRNLQTWEILDQVLQ-------VREEADRPVRGVVFMGMGEPLLNYKETLRA 172 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDK-LGDMIDVALAISLHAPNDEIRDEIVPINK 250 +I+ GF ++ +T ST+G VPA+ + + + LA S+ + E R +++PI K Sbjct: 173 ADILRHPAGFSIAGEAITFSTAGHVPAIRRYVREGHPYRLAFSVTSAIAEKRAKVLPIEK 232 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 + + +AA+R Y S + R I YV + N G E A L + K++LI Sbjct: 233 THPLPELIAAIREY---SEVRRERAMIAYVAISGFNMGREDAEALKVAFEGIRIKVDLID 289 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 P Y + + F L R + G +I AACG LA Sbjct: 290 VTD-PTGKYLPPTPEELSAFRDHLQILKSPVARRYSGGKEIGAACGTLAA 338 >UniRef50_C7GI13 Radical SAM enzyme, Cfr family n=15 Tax=Clostridiales RepID=C7GI13_9FIRM Length = 329 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 17/275 (6%) Query: 87 RSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRV 145 +SSD T K+ + D R +ETV+I D T+CVS+QVGC++ C FC + + GF RNL Sbjct: 59 KSSD-TEKYVYELKDNRYIETVFIKRRDGGTVCVSTQVGCSVGCIFCESGRNGFVRNLTP 117 Query: 146 SEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK 205 SEI+ QV + ++ + +V MGMGEPL N +N++ A+ I+ D G Sbjct: 118 SEIVQQV-----------ILIRQKVNRIVFMGMGEPLFNYDNLIAAIHILRDRNGLNFPT 166 Query: 206 RRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRY 264 +T+ST G V L KL + + + L ISLHA R+ I+P Y IE V++ Sbjct: 167 DGITVSTVGPVNQLKKLREEHLKIQLTISLHAATQAARNCIIPHMHMYAIED---VVKQA 223 Query: 265 LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSN 324 L S + +V Y++L +ND + QLA+ K IN++ +NP + Sbjct: 224 LSYSQRHNRKVVFAYLLLPGINDRSSDIRQLAKWFKGKNVMINVLQYNPTSNSKIRAPQK 283 Query: 325 SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 + F L G +R + G +I AACGQLA Sbjct: 284 QEMVAFKHQLEQTGLEVTMRVSHGREIKAACGQLA 318 >UniRef50_Q2Z000 Putative uncharacterized protein n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z000_9BACT Length = 365 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 60 MTDINKVLRGKLKEVAEIRAPEVVEEQRS---SDGTIKWAI-AVGDQRVETVYIP----- 110 + +++ + +++E E+R P++V + ++ DG K+ G + E V IP Sbjct: 64 LPEVSDKMLARIRE--EVRLPKLVLKDKAVSARDGFAKYLFQGDGPEPFEAVRIPLLHRS 121 Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI 170 D++ C+SSQVGCAL C FC+T + GF RNL E++ QV R + + PI Sbjct: 122 GDEKYIACLSSQVGCALGCAFCATGRMGFVRNLSAWEMVDQVIRLS-------ADSEHPI 174 Query: 171 TNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVA 229 V MGMGEP+LN VV A I+ + G +S + V++ST+GVVP + + D + Sbjct: 175 RGAVFMGMGEPMLNYEAVVRAARILCEPCGLAVSAKAVSISTAGVVPGIRRFTADRLPFR 234 Query: 230 LAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGT 289 L +SL + + R E++P+ + Y + + AVR Y + S RV + + M+ N Sbjct: 235 LVVSLTSADSARRREVMPLEQAYPLTDLMEAVREYHKSSGQ---RVILAWTMISGFNTRE 291 Query: 290 EHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRK-TRG 348 E A QLA L++ P +++LI N G + S+ + F L + + R+ + G Sbjct: 292 EDAVQLAALVRGLPIRLDLIDVNDATGR-FKPPSSLELHEFRDALSKHLKMPVARRYSGG 350 Query: 349 DDIDAACGQLAG 360 DI AACG LAG Sbjct: 351 KDIRAACGMLAG 362 >UniRef50_B5Y3J7 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y3J7_PHATR Length = 290 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 108/286 (37%), Positives = 149/286 (52%), Gaps = 17/286 (5%) Query: 87 RSSDGTIKWAIAVGDQ-RVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLR 144 +S D T K + + D VETV IP R+TLCVSSQVGC C FC+T + G R+L Sbjct: 4 QSRDSTTKLLLRLSDGLEVETVIIPWTGGRSTLCVSSQVGCRQGCTFCATGRMGKLRSLN 63 Query: 145 VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLS 204 EI+ Q++ A KI + P+TNVV MGMGEP N + V+ A +IM F LS Sbjct: 64 ADEILAQLFFARKICRQKNLP---PVTNVVFMGMGEPADNKDAVIRATDIMTTRELFQLS 120 Query: 205 KRRVTLSTSGVVPALDKLGDMIDV--ALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 +VT+ST V P D LA S+HA NDE+R ++VP K E + Sbjct: 121 ASKVTVST--VAPTPDSFLQFAHAHCVLAWSVHAANDELRRQLVPTTKHAMTELRQGLID 178 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE----LLKDTP-CK--INLIPWNPFP 315 L + + N +E ++ +ND + A +L + ++ + P CK +NLIP+N Sbjct: 179 TLLIRPH-NFRTTMLEVALISGINDSEKEADELVDFAQVIIDEVPGCKLVVNLIPFNDIG 237 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 Y + S + F K L +G +R TRGDD AACGQLA + Sbjct: 238 QNRYTKPSMEAVSVFQKRLREFGLVAHIRTTRGDDESAACGQLATN 283 >UniRef50_B6KPF5 Radical SAM domain-containing protein n=4 Tax=Toxoplasma gondii RepID=B6KPF5_TOXGO Length = 619 Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 141/259 (54%), Gaps = 25/259 (9%) Query: 114 RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNV 173 RAT+C+S+QVGC + C FC+T G RNL EI+ Q++ A+++ I N+ Sbjct: 214 RATVCLSAQVGCQMGCTFCATGTMGKKRNLAEWEILEQLYHASRV---------ETIRNI 264 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAI 232 V MGMGEPL N N+VV ++ M F + RV +ST G+ + +L D+ LA+ Sbjct: 265 VFMGMGEPLDNYNSVVSSIRFMTQPNKFAIGGHRVCISTVGLPHKIRQLASDLPACRLAL 324 Query: 233 SLHAPNDEIRDEIVP-INKKYNIETFLAAVRRYLEKSN-------ANQGRVTIEYVMLDH 284 SLHAP+ R +++P + +E L A ++++ N G + +EY+M+ Sbjct: 325 SLHAPDQPTRLKLMPRAAAGWKLERVLEATDEFVKQQKRLNSTGMKNIG-LLVEYIMIQD 383 Query: 285 VNDGTEHAHQLAELL--KDTPCKINLIPWNPFPGAPYGR--SSNSRIDRFSKVL-MSYGF 339 VND E AH L +L + +NLIP+NP PY S+ R+D F +L Y Sbjct: 384 VNDTLEQAHALGRILQPRADAVIVNLIPYNP-TDVPYDYKPSTQERVDDFLTILRKEYAI 442 Query: 340 TTIVRKTRGDDIDAACGQL 358 +VR+T G DID+ACGQL Sbjct: 443 KVLVRQTLGQDIDSACGQL 461 >UniRef50_Q8IM25 Radical SAM protein, putative n=5 Tax=Aconoidasida RepID=Q8IM25_PLAF7 Length = 362 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 171/336 (50%), Gaps = 28/336 (8%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE--IRAPEVVEEQRSSDGTIKWAI 97 +R Q+M +Y ++M +I +R +LK + I + + ++E + D K Sbjct: 22 YRLKQIMDNIYKGKIIEINKMKNIPTEIRRELKNIFHNNILSIKPIKELKY-DRAYKVLF 80 Query: 98 AVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQ-VWRA 155 D +++E + +LC+SSQ+GC+ CKFC+T Q G R L + EI Q ++ Sbjct: 81 QCKDNEKIEATSLDFGSHKSLCISSQIGCSFGCKFCATGQIGIKRQLDIDEITDQLLYFQ 140 Query: 156 AKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV 215 +K V I N+ MGMGEPL N V +++ D+ F +S RR+ +ST G+ Sbjct: 141 SKGVD---------IKNISFMGMGEPLAN-PYVFDSIQFFNDNNLFSISNRRINISTVGL 190 Query: 216 VPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGR 274 +P + KL ++ V LA SLH+P E RD++VPINK + + + K+ R Sbjct: 191 LPGIKKLNNIFPQVNLAFSLHSPFTEERDQLVPINKLFPFNEVFDLLDERIAKTGR---R 247 Query: 275 VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN------LIPWNPFPGAP--YGRSSNS- 325 V I Y+++ ++ND +HA L++ + P I LIP+N + R ++ Sbjct: 248 VWISYILIKNLNDSKDHAEALSDHICKRPNNIRYLYNVCLIPYNKAKNVDENFHRLDDAE 307 Query: 326 RIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 +I +F K+L G + R + G IDAACGQL D Sbjct: 308 KILQFEKILKKNGISFFYRNSFGYSIDAACGQLYAD 343 >UniRef50_C7GZA9 Radical SAM enzyme, Cfr family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZA9_9FIRM Length = 342 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/346 (29%), Positives = 174/346 (50%), Gaps = 19/346 (5%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 +L +N +++ LGEK +RA Q+++ + + D+ D++ I+K R KL I Sbjct: 3 SLAGMNLKEIESVVLSLGEKAYRAKQILEAVNNGV-DSIDKIHTISKDFRAKLSNKYTIS 61 Query: 79 APEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 + V ++ S DG+IK+ + D + +E + + +LC+SSQ GC + C FCS+ + Sbjct: 62 SITVEKKLVSKRDGSIKYLLKTSDGKFIEAMSMVYKHGVSLCISSQAGCRMGCTFCSSGK 121 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 +G RNL E+I QV + G I+ +V+MG GEP N + + ++ + Sbjct: 122 EGLERNLSAFEMIEQVLILKR--------GFDKISGIVVMGTGEPFDNYDELKKFLKRIT 173 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 ++ + KR +T+ST G+ + K D + LA SLHA +++IR +I+P N K +++ Sbjct: 174 NEEFLRIGKRHITVSTCGIEEGIKKFSKDFRSINLAFSLHAASNDIRKKIMPGN-KLSVD 232 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + E + + RVT EY+++ VND L LK C +NLI N Sbjct: 233 DIIGLAS---EHAKITRRRVTFEYILIKGVNDSMAECELLCRKLKGINCLVNLIRLNGSS 289 Query: 316 GAPYGRSSN---SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 R S+ + ++ L +R+T G+DI ACGQL Sbjct: 290 YEGDNRFSSPDMKTVKQWQNELEKRHIQVTIRRTIGEDIQGACGQL 335 >UniRef50_Q01C13 Homology to unknown gene n=1 Tax=Ostreococcus tauri RepID=Q01C13_OSTTA Length = 368 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 145/293 (49%), Gaps = 32/293 (10%) Query: 76 EIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPE-DDRATLCVSSQVGCALECKFC 132 E+ V E SSDG T K + + D ++E + R TLCVSSQVGC + C FC Sbjct: 22 ELYTTRVAHESASSDGSTTKLIVELQDGHKIEACVMRHAKGRTTLCVSSQVGCKMGCTFC 81 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T G NL EI+ Q+ A ++ PL N ++V+ A+ Sbjct: 82 ATGTLGELGNLASFEILEQLAHANRVAA--------------------PLNNYDSVIEAI 121 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 +M DD F LS ++T+ST GV+P + L D LA+SLHAP E+R +IVP Sbjct: 122 GVMTDDKAFALSASKITVSTVGVIPRMRTLTRDAPGTCLALSLHAPTQELRQKIVPTATA 181 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI--NLI 309 Y ++ + + YL ++ + + IEY +L VND A +L EL + KI NLI Sbjct: 182 YKLDDLMRVLEEYL--ASGPKMKTMIEYCVLGGVNDDETCAEKLGELFRGKEEKIILNLI 239 Query: 310 PWNPFPGAPYGR--SSNSRIDRFSKVLM-SYGFTTIVRKTRGDDIDAACGQLA 359 P NP P G + + + ++LM YG R T GDDI ACGQLA Sbjct: 240 PLNPT-DTPAGHVPPTPEAVRKMMEILMKKYGLFVTRRHTMGDDIAGACGQLA 291 >UniRef50_A8J882 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J882_CHLRE Length = 239 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/244 (38%), Positives = 125/244 (51%), Gaps = 14/244 (5%) Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC T ++G NL ++II + PITN+V MGMGEPL N Sbjct: 1 MNCQFCFTGRRGLLGNLSTAQII----EQPQPRPQQSQQAPPPITNLVFMGMGEPLHNPT 56 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-------GDMIDVALAISLHAPND 239 V A++I+ G +S RVTLST G++P L G V LA+S+HA D Sbjct: 57 AVFAAIDILAHRHGLAMSPSRVTLSTVGLLPQLQHFLDSSRGEGGRARVCLAVSIHAGTD 116 Query: 240 EIRDEIVPINKKYNIE-TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAEL 298 E+R IVP N + ++ + + A + V EY +L VND E A L E Sbjct: 117 ELRGAIVPSNTRLSLPPAGFSPSNNTIRPLRAGR-YVLFEYTLLRGVNDRPEDAAALLEA 175 Query: 299 LKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 KD C NLI +NPFPG Y S+ R+ F KVL + G VR ++GDD AACGQL Sbjct: 176 TKDIECSFNLIMFNPFPGTLYSPSTPERLLAFQKVLWAAGRIVHVRLSKGDDGMAACGQL 235 Query: 359 AGDV 362 GDV Sbjct: 236 -GDV 238 >UniRef50_A9EPV3 Probable RNA methyltransferase sce3898 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=Y3898_SORC5 Length = 393 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 122/382 (31%), Positives = 182/382 (47%), Gaps = 57/382 (14%) Query: 8 PENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 PE + G I+L D R + LGE P RA ++ + Sbjct: 3 PEELAGACG-IDLTDARR--IVSLAHRLGELPARAPATVR-----------------RAA 42 Query: 68 RGKLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGD-QRVETVYIP--EDDRATLCVSSQV 123 + EIR +VE + S+ D +K+A + D VE+V IP R + CVSSQV Sbjct: 43 LDAARSAGEIRTLALVERRASAEDPFVKYAFRLEDGATVESVRIPLERPGRYSACVSSQV 102 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCAL C FC+T + G RNL EI+ QV + + A G R + V+ GMGEPL Sbjct: 103 GCALACAFCATGRMGLTRNLEAWEIVEQVRLIRRDLDATVGGGAR-VHGVLFQGMGEPLA 161 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIR 242 N + V+ A+ ++ + + R +T+ T+G+ + +L ++ V L +SL + R Sbjct: 162 NADRVIQAIRVLSEPSAQAIDMRNITVCTAGLPSGIRRLAAEVPAVRLGLSLGSVRPGKR 221 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD- 301 ++PI+ + +E LAAV E + A+ Y +L ND E A LA L + Sbjct: 222 RLLMPIDGAHPLEEVLAAVG---EHARASGHAPMWAYTLLADQNDTDEDAACLAALARGF 278 Query: 302 ------TPCKINLIPWN-------PFP--------GA---PYGRSSNSRIDRFSKVLMSY 337 +P +++LIP+N P P GA P+ RS +R+D F VL + Sbjct: 279 AAQHGISP-RLSLIPYNAIGAPGDPLPSPDGGDERGASADPFVRS--ARLDAFRAVLSAA 335 Query: 338 GFTTIVRKTRGDDIDAACGQLA 359 G +IVR + G D+ AACGQLA Sbjct: 336 GVGSIVRYSGGGDVGAACGQLA 357 >UniRef50_B8LDJ4 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDJ4_THAPS Length = 319 Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 112/311 (36%), Positives = 152/311 (48%), Gaps = 45/311 (14%) Query: 82 VVEEQRSSDGTIKWAIAVGDQ-RVETVYIP------------EDD-----RATLCVSSQV 123 +V SSDGT K + + D VETV IP E D R T+C+SSQV Sbjct: 20 LVHTSTSSDGTTKLLLRLMDGLEVETVLIPFWADVAQKKRINEKDNSSLGRTTVCISSQV 79 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GC C FC+T + G R+L EI+ Q++ A K+V PITN+V MGMG+ Sbjct: 80 GCRQGCTFCATGRMGKLRSLTTDEILAQLFYAKKVVRVV----LPPITNIVAMGMGDAAD 135 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID--VALAISLHAPNDEI 241 N++ V A+ IM F S RVT+ST V P+ D D LA S+HA DE+ Sbjct: 136 NVDAVKGAINIMTRRELFQFSASRVTVST--VAPSPQAFLDFADSKCILAWSVHATRDEL 193 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT--IEYVMLDHVNDGTEHAHQLAELL 299 R ++VP K +E +R+ L + + T IE ++D VND A +LAE L Sbjct: 194 RKQLVPTTKYPMVE-----LRQGLIDALKQRKLRTCMIEVALMDGVNDSMREAEELAEFL 248 Query: 300 KDTPCKI-------NLIPWNPF-PGA----PYGRSSNSRIDRFSKVLMSYGFTTIVRKTR 347 ++ NLIP+N GA Y + S ++ F K L VR TR Sbjct: 249 TYITNEVPGSKLLCNLIPYNDIGEGAGGVVAYRKPSMEKVMAFQKRLQELSVYAHVRGTR 308 Query: 348 GDDIDAACGQL 358 GD+ ++ACGQL Sbjct: 309 GDEENSACGQL 319 >UniRef50_Q5CQD5 Conserved protein with transmembrane region at C-terminus (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CQD5_CRYPV Length = 602 Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 97/336 (28%), Positives = 145/336 (43%), Gaps = 97/336 (28%) Query: 114 RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNV 173 R ++CVSSQ+GC + C FC+T G +L EI+ Q++ I+ + P+ NV Sbjct: 144 RISICVSSQIGCRMGCMFCATGSMGLRGSLLSGEILQQLYYIKNIL-------KEPVRNV 196 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAI 232 V MGMGEPL N + V+ ++ +M+D F LS + +ST G+ + L D+ V L + Sbjct: 197 VFMGMGEPLENYDEVIDSIRLMVDPRIFSLSSGHILVSTVGIPSNIINLADDLPGVGLCL 256 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ-------------------- 272 SLHAPN +R+ I+PI + Y I + ++ ++ K+ N+ Sbjct: 257 SLHAPNQSLRERIIPIARLYKISDLMRSLDIFIFKTIINKCYKNLLDDRNKDHIKDNMNY 316 Query: 273 -------------GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP--------- 310 + IEY ML VND +HA +LA LLK+TP N+I Sbjct: 317 DDILISNKLLYGHKMIIIEYTMLKDVNDSEDHAVELANLLKNTPISKNIIEEIIDNRDDS 376 Query: 311 ---------------------------------WNPFPGA-----PYGRSSNSR------ 326 +N A PY +++ S Sbjct: 377 VKMNINYMSDNKIINKNFKSHIASTIFKELSKDFNRTNFAIVNLIPYNKTNTSTRFSTPS 436 Query: 327 ---IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 I +F+KVL+ VR+ GD I ACGQLA Sbjct: 437 KEIITKFAKVLIDLNIFVTVRRKMGDGIFGACGQLA 472 >UniRef50_Q3SHI2 Probable RNA methyltransferase Tbd_1951 n=22 Tax=Bacteria RepID=Y1951_THIDA Length = 362 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 163/347 (46%), Gaps = 28/347 (8%) Query: 27 QMREFFKDLGEKPFRADQVMK-WMYHYCCDNFDEMTD------INKVLRGKLKEVAEIRA 79 ++R+ +D G P A +V++ W+ DN + + + L G E+ + Sbjct: 5 ELRQRLRDHGAAPCHAGRVLRAWVAGRPLDNRRQRAEDFLPLRLRNALPGLFDELRNL-- 62 Query: 80 PEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG 138 +V E DG+ + + + D Q VE+V +P D +CVS+QVGCA+ C FC T + G Sbjct: 63 AQVHSEHPGEDGSARLLVRLADGQTVESVLLPRDG---VCVSTQVGCAVGCVFCMTGRAG 119 Query: 139 FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 R L +EI+ QV A +RP+ VV MGMGEP NL+NV+ A+E++ + Sbjct: 120 LLRQLSGAEIVAQVVLARS---------RRPVRKVVFMGMGEPAHNLDNVLDAIELLGLE 170 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 G G + + ST G ++L + A A+SLH + +R ++P + Sbjct: 171 GGIG--HKNLVFSTVGDRRVFERLPQSTVKPARALSLHTTDRALRRRLLPRAPDIAPQEL 228 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGA 317 + Y ++ + ++ +L+ +ND +A LL +NLIP+N Sbjct: 229 VELGEAYARRTGYP---IQYQWTLLEGINDTEAELEGIARLLAGRYAVMNLIPYNATEAD 285 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 + R S +R ++ L G +R + G D+D CGQL +D Sbjct: 286 GFNRPSWARAAEMARRLHRRGVLAKLRHSAGQDVDGGCGQLRARALD 332 >UniRef50_B3LAU1 Radical SAM protein, putative n=4 Tax=Plasmodium RepID=B3LAU1_PLAKH Length = 377 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 25/284 (8%) Query: 40 FRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV--AEIRAPEVVEEQRSSDGTIKWAI 97 +R Q++ MY + +M ++ +R ++K++ + + + ++E + D K Sbjct: 22 YRLQQILDNMYKAKITSVSKMKNVPTNIRREMKKIFSENLLSIKPLKEYKF-DRAYKVLF 80 Query: 98 AVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAA 156 D +++E + +LC+SSQ+GC+ CKFC+T Q G R L + EI Q+ Sbjct: 81 ECKDKEKIEATSLDFGSHKSLCISSQIGCSFACKFCATGQIGIKRQLELDEITDQLLYFQ 140 Query: 157 KIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV 216 + + NV MGMGEPL N +V +++ + F LS RR+ +ST G++ Sbjct: 141 --------SKNENVRNVSFMGMGEPLAN-PHVFESIKFFNNVNLFSLSSRRINISTVGLL 191 Query: 217 PALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG-R 274 P + KL D+ V L+ SLH+P E RD++VPINK + L L+ A G R Sbjct: 192 PGIKKLNDLHPQVNLSFSLHSPFSEERDKLVPINKLFPFHEVLDL----LDSRIARTGRR 247 Query: 275 VTIEYVMLDHVNDGTEHAHQLAELLKDTP------CKINLIPWN 312 V I Y++L VND +HA L + P + LIP+N Sbjct: 248 VWISYILLKDVNDSKDHAEALCNHIVQRPRAVRYLYNVCLIPYN 291 >UniRef50_UPI000190F78A hypothetical protein Salmonentericaenterica_19178 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E01-6750 RepID=UPI000190F78A Length = 64 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/64 (96%), Positives = 63/64 (98%) Query: 321 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAID 380 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGE ID Sbjct: 1 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEVID 60 Query: 381 IKAV 384 IKA+ Sbjct: 61 IKAI 64 >UniRef50_C6P0S6 Radical SAM domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0S6_9PROT Length = 412 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 108/403 (26%), Positives = 175/403 (43%), Gaps = 88/403 (21%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYC--------CDNFDEMTDINKV--LRGKLKEVAE 76 +R+ DLG KP D++++ C + F + N++ + +L +A Sbjct: 5 HLRQRLYDLGAKPCHEDRLLRGWSQVCSYDRKGSPAETFFPLALRNELPGIEAELDGLAR 64 Query: 77 IRA--PEVV---------EEQRSSDG--TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQ 122 +++ P+ + E R SD + I + D Q VE+V +P R LCVS+Q Sbjct: 65 LKSEHPDTLTLPLSQGERELNRHSDNEKVARLLIELHDGQMVESVLLP---RGGLCVSTQ 121 Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL 182 VGCA+ C FC + + G R L +EI+ QV A K +R ++ VV MGMGEP Sbjct: 122 VGCAVGCVFCMSGRDGLLRQLGSAEIVAQVVLARK---------RRAVSKVVFMGMGEPA 172 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV-------------------------- 216 NL+NV+ A+E++ G + + LST G + Sbjct: 173 HNLDNVLEAIELLGTQGNIG--HKNLVLSTVGDLRVFERLMEGLTHKPSPQPSGGTTDHS 230 Query: 217 -------------PALDKLGD--------MIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 PA + G+ + ALA+SLH ++ +R ++P + +E Sbjct: 231 TRPSENNGQVAGHPACGRGGNRERQSSIAAVKPALALSLHTTDEVLRTRLLPQAPRIPVE 290 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + Y + A V ++ +++ VND ++ +LLK +N IP+N Sbjct: 291 ELVERAEIY---ARATGYPVQYQWTLIEGVNDSDAELARIVQLLKGKYAIMNFIPFNEVD 347 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 G Y R S RI + L G + VR + G +I+ ACGQL Sbjct: 348 GLTYRRPSGERIAAMAYALNGQGIYSRVRDSAGQEIEGACGQL 390 >UniRef50_B6KND1 GPI transamidase 8, putative n=3 Tax=Toxoplasma gondii RepID=B6KND1_TOXGO Length = 270 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 21/248 (8%) Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL 182 GCA C FCS + GF R L EI QV + G + I +V MGMGEPL Sbjct: 9 AGCAFNCSFCSVGKSGFLRQLSADEITDQVLFFLR-------QGIK-IDSVSFMGMGEPL 60 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEI 241 N + A+ I+ D F S R++ +ST GV+P + KL + V LA SLH+P E Sbjct: 61 AN-PKMFDAIRILTDPLLFNFSARKLAVSTLGVLPGIKKLTEEHPQVNLAFSLHSPFPEE 119 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 R+ +VP N+ + +E + L K+ R+ I Y+++ N+ EHA LA LL++ Sbjct: 120 RNILVPANRMFPMEEVFDLLDERLAKTGR---RIWISYILIKGRNNTEEHAKALAALLRE 176 Query: 302 --TPCK----INLIPWNPFPGAPYGRS--SNSRIDRFSKVLMSYGFTTIVRKTRGDDIDA 353 P + +N+IP+N G S + ++ F+ +L + R T G IDA Sbjct: 177 RRRPTRHLYHVNVIPYNTAQGVESSMQPPSAAEVNHFTDLLRKLHLSVSRRHTIGSAIDA 236 Query: 354 ACGQLAGD 361 ACGQ+ + Sbjct: 237 ACGQMHAE 244 >UniRef50_C5KHT4 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KHT4_9ALVE Length = 308 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 20/237 (8%) Query: 74 VAEIRAPEVVEEQRSSDGTIKWAIAVGDQ--RVETVYIPEDDRATLCVSSQVGCALECKF 131 + E +P V EQ S+D K+ + ++E V + +LCVSSQ+GCA C F Sbjct: 86 LGESLSPLRVLEQGSADFAHKFLLESRQDGGKIEAVGLDFRSHTSLCVSSQIGCAFNCSF 145 Query: 132 CSTAQQGFNRNLRVSEIIGQV--WRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 C+T + G R L V EI+GQV +RA V + +V MGMGEPL N + Sbjct: 146 CATGKLGLKRQLSVDEIVGQVLMFRATGNV----------VDSVSFMGMGEPLAN-PKIF 194 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVA-LAISLHAPNDEIRDEIVPI 248 A+ +M D GLS RR+++ST G++P L KL ++ A +A SLH+P E R++I+PI Sbjct: 195 NAISVMTDPQLVGLSTRRMSISTIGIIPGLVKLTELHPQANVAYSLHSPFPEEREKIMPI 254 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA-HQLAELLKDTPC 304 + Y + ++++ R+ I Y++L +ND +A ++ LK P Sbjct: 255 QRVYPFAKVFDVLDDRIKRTGR---RIWISYLLLKGINDSERYATYEAKNALKRKPA 308 >UniRef50_Q4HQT8 Radical SAM enzyme, Cfr family n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HQT8_CAMUP Length = 286 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 24/189 (12%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+LDL +++ E + + FR Q+ +W+Y D+F +M+++ K LR +L + Sbjct: 6 NILDLLPEELNEKIQPM----FRVKQICQWIYQKYADDFSKMSNLPKNLREELAKNYHFE 61 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDD-------------RATLCVSSQVG 124 + ++E+RS DG+IK+ + D R+E+V +P + + T+CVSSQVG Sbjct: 62 PLKCIKEERSKDGSIKYLFELEDGLRIESVLLPMKEEKFDEEGKRLSHAKFTICVSSQVG 121 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQV-WRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 C C FC TA+ G RNL EI+GQ+ W I + +R + N+V MGMGEPL Sbjct: 122 CRSGCSFCLTAKGGLKRNLSAGEIVGQILW----IKRQNHIPYERRV-NIVYMGMGEPLD 176 Query: 184 NLNNVVPAM 192 NLNNV A+ Sbjct: 177 NLNNVAKAV 185 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 52/85 (61%) Query: 274 RVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKV 333 +V EY+++D +ND EHA +L +LL K+NLI +NP G+ Y R + +F + Sbjct: 195 KVMFEYLLIDGINDKIEHAKELVKLLNGIKAKVNLILFNPHQGSIYKRPNLENAVKFQDL 254 Query: 334 LMSYGFTTIVRKTRGDDIDAACGQL 358 L G T +R+++G DI AACGQL Sbjct: 255 LSQKGVTCTIRESKGLDISAACGQL 279 >UniRef50_UPI00006DCC08 hypothetical protein CdifQ_04003012 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCC08 Length = 183 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 104/181 (57%), Gaps = 10/181 (5%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 KI L + +++EF K + EKPFR Q+ W+Y FD+M +I K LR KL+EV+ Sbjct: 5 KIVLKNFTEDELKEFMKTIDEKPFRGSQIFSWIYK-GAKTFDDMNNIPKSLRNKLEEVSC 63 Query: 77 IRAPEV-VEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 I ++ ++ + D T K+ + D + ETV + D R T+CVS+QVGC + C FC++ Sbjct: 64 IGNIDIELKLESKVDNTKKYLFLLDDGNIIETVMMDYDSRVTVCVSNQVGCRMGCNFCAS 123 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNL EI+ QV + + TG+R ++N+V+MG GEPL N N ++I Sbjct: 124 TMDGLIRNLEPWEILDQV------IKIQEDTGKR-VSNLVLMGSGEPLDNFENTKQFLKI 176 Query: 195 M 195 + Sbjct: 177 I 177 >UniRef50_Q3EPJ3 Radical SAM family enzyme n=1 Tax=Bacillus thuringiensis serovar israelensis ATCC 35646 RepID=Q3EPJ3_BACTI Length = 246 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 107/180 (59%), Gaps = 7/180 (3%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 +NV TK K ++ L +M+++ K+ GE FRA Q+ W+Y N+++M++++K LR Sbjct: 10 KNVETK--KPSIYSLQIHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLR 67 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCAL 127 KL +I + +Q SSDGTIK+ + D +ETV + + ++CV++QVGC + Sbjct: 68 DKLSNSFDITTLNTLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVTTQVGCRI 127 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C FC++ G RNL EI+ QV ++ A T +R ++++V+MG+GEP N +N Sbjct: 128 GCTFCASTLGGLKRNLEAGEIVAQV---VEVQRALDETEER-VSSLVVMGIGEPFDNYDN 183 >UniRef50_D0MX90 Ribosomal RNA large subunit methyltransferase N, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MX90_PHYIN Length = 224 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 13/213 (6%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +++ + F + K A + +++ + F ++ I K LR L E V Sbjct: 13 FDQKALPVFLQKHDFKELHALTIWRYLAQHPDATFADIPGIPKTLRTLLGEHFAHFTTSV 72 Query: 83 VEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 EQRS+DGT+K + + D +E V + R TLCVSSQVGC + C FC+T G Sbjct: 73 TTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGCTFCATGTLGIIA 132 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 +L EI+ Q+ A ++ PI NVV MGMGEPL N + V+ A+ M F Sbjct: 133 DLCSGEILEQLAHANRVA---------PIRNVVFMGMGEPLNNYDAVLAAIRAMTKV--F 181 Query: 202 GLSKRRVTLSTSGVVPALDKLG-DMIDVALAIS 233 GL+ + +TLST GV+ + +L D V LA+S Sbjct: 182 GLAPKYITLSTVGVIHRIRQLSRDAPLVRLALS 214 >UniRef50_C5K4P4 Putative uncharacterized protein n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K4P4_9ALVE Length = 242 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 95/175 (54%), Gaps = 17/175 (9%) Query: 201 FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 FG+ +R +T+ST GV+P + L D V LA+SLHAP +R++IVP K ++I+ +A Sbjct: 5 FGIPQRCITVSTVGVIPRIRSLAHDASGVKLALSLHAPTQALREKIVPSAKAWSIDELMA 64 Query: 260 AVRRYLEKSNANQGR-------------VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 AV Y E S GR V IEYV++ VND E AHQL L+K+ + Sbjct: 65 AVDEYSEASRV-AGRPDGSGGGGRKKGSVMIEYVVIRDVNDTEECAHQLGVLMKNRKAVV 123 Query: 307 NLIPWNPFP-GAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDAACGQLA 359 N IP+N G+ + S + R +L YG R+ G DIDAACGQLA Sbjct: 124 NFIPYNAVDNGSNFEPPLESSVTRMVSILKDVYGVRVYYRRHHGRDIDAACGQLA 178 >UniRef50_B8BRJ2 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRJ2_THAPS Length = 438 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 105/365 (28%), Positives = 165/365 (45%), Gaps = 53/365 (14%) Query: 22 DLNRQQMREFF---KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 DLN F + LG ++ Q YH ++ + +D N + +A + Sbjct: 93 DLNTISNEHGFDKGQGLGMSAWKKLQSSMQQYHATANDPTQQSD-NDSMYSINDSIASLS 151 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ--RVETVYIPEDDR--ATLCVSSQVGCALECKFCST 134 +V SSDGT K + + VE+V IP D+ +TLCVS G Sbjct: 152 HMKV-----SSDGTTKLLLKMVKDGLEVESVIIPWMDKGFSTLCVSWAAG---------- 196 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAK-VTGQR-----PITNVVMMGMGEPLLNLNNV 188 V ++ ++ A+KI + + G P+ N+V MGMGEP N + V Sbjct: 197 --------KDVHSVLPDMYYASKICRVVESIPGNENKALPPVDNIVFMGMGEPADNADAV 248 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVP-ALDKLGDMIDVALAISLHAPNDEIRDEIVP 247 V A+ ++D FG+ + ++T+ST P A LG ALA S+HA +D +R ++VP Sbjct: 249 VRAVNTLVDRRMFGVGQSKITISTVAPDPSAFATLGS-APAALAWSVHAVDDSLRRQLVP 307 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAEL-------LK 300 KY++E A + + L + R +E ++ VND + A L+E ++ Sbjct: 308 TT-KYSMEELRAGLVKALSLRSNKLRRTMLEVALMKDVNDSPDDARLLSEFAMSIMKEVR 366 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYG------FTTIVRKTRGDDIDAA 354 + +NLIP+N Y S R+ F K+++ G VR TRGD+ +A Sbjct: 367 GSKIVVNLIPFNDIGHPTYRTPSMERVLEFQKIVVESGDNCDTQVLCYVRTTRGDEESSA 426 Query: 355 CGQLA 359 CGQLA Sbjct: 427 CGQLA 431 >UniRef50_C0QTQ8 Radical SAM enzyme, Cfr family n=4 Tax=Aquificales RepID=C0QTQ8_PERMH Length = 271 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 130/266 (48%), Gaps = 26/266 (9%) Query: 104 VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK 163 VE+VY D TLCVSSQ+GC + C FC++ G RNL EII Q +R A Sbjct: 25 VESVYYRGD---TLCVSSQLGCPVRCSFCASGMNGLIRNLSYDEIIDQ-YRIA------- 73 Query: 164 VTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV-VPALDKL 222 V+ I N+ G+GEPLLN NV A D G + + T+G + +L Sbjct: 74 VSEGMEIKNIAFAGIGEPLLNWENVKKAF-YHFKDIGL-----KASFYTTGFPLKNFKEL 127 Query: 223 GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK-SNANQGRVTIEYVM 281 ++ +++SLHA DE R +++P + ++ L + +L K S + +I Y++ Sbjct: 128 LELPHNGVSLSLHAVTDEKRKQLIPYGQP--LDQILDVFKDHLSKLSRRKRKMYSIAYLL 185 Query: 282 LDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGF-T 340 + VND E +L+++ +D ++L+ +N G Y +S+ +R L G Sbjct: 186 IGGVNDSEEEIQKLSQIARDLQVGVSLLKYNEIDGIDYRSTSDEEYERVFLQLRENGIRV 245 Query: 341 TIVRKTRGDDIDAACGQLAGDVIDRT 366 T+ + R I CG L +I+RT Sbjct: 246 TLSNRYRTRKI-GGCGTL---MINRT 267 >UniRef50_B1AIK2 Putative uncharacterized protein n=15 Tax=Ureaplasma RepID=B1AIK2_UREP2 Length = 336 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 162/332 (48%), Gaps = 24/332 (7%) Query: 30 EFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSS 89 E FK LG K F + Q+ W+Y NFD+ ++I K LKE ++ Q +S Sbjct: 22 ELFK-LGLKSFISKQIYSWIYQKRIFNFDKFSNIAKNNVIILKENFSNNLLKINSYQSNS 80 Query: 90 DGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEII 149 DG+IK+ + I + L + G + + NL +E++ Sbjct: 81 DGSIKFEFLTDKNLIINCMIIKFKNGFLIKINPFGINFKKEII---------NLSTNELV 131 Query: 150 GQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVT 209 Q+ + + K+ ITNV++ G+ + LLN++ V + I+ ++ G + KR++ Sbjct: 132 LQILLIQQFLDQRKLGN---ITNVIIKGLQDSLLNMDVVSNFINIINNENGLNIGKRKIA 188 Query: 210 LSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIV--PINKKYNIETFLAAVRRYLE 266 + TSG+ L K G + + + L IS++A N I +I+ +N+ ++ + ++ Y + Sbjct: 189 VWTSGINVDLIKWGQLQNQIELIISMNASNSLIYQKIMLKKLNQNWSFLKLIEQIKAYTK 248 Query: 267 KSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSR 326 +N RV +EY+++D +ND +A++L ELLK+ C + LIP+N Y S+N Sbjct: 249 ITN---NRVVLEYLLIDKINDDLNYANELVELLKNILCYVLLIPYNL---NNYRTSAN-- 300 Query: 327 IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +D F +L R + +D+D + QL Sbjct: 301 LDDFFNILSVNKIRISKRIRKSNDLDISFKQL 332 >UniRef50_UPI0001698B52 radical SAM enzyme, Cfr family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B52 Length = 133 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Query: 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 +SLHAP +E+RD++VPIN+KY +E + A R +++ + ++T EYVMLD +ND +H Sbjct: 1 MSLHAPTNELRDQLVPINQKYPLEELIPACRDFIKGDK--RRKITWEYVMLDGINDSIQH 58 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTT-IVRKTRGDD 350 A L LL+ TP K+NLIP+NPFPG Y S S G ++ + + G+D Sbjct: 59 AKALIRLLEGTPSKLNLIPFNPFPGTSYKTSPRGAGRGISPAPDESGASSPLPARPAGED 118 Query: 351 ID 352 ID Sbjct: 119 ID 120 >UniRef50_C1DT21 Radical SAM enzyme, Cfr family n=3 Tax=Sulfurihydrogenibium RepID=C1DT21_SULAA Length = 276 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 115/248 (46%), Gaps = 20/248 (8%) Query: 114 RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNV 173 R TLCVSSQVGC+++C FC++ G RNL EII Q + K G I ++ Sbjct: 31 RKTLCVSSQVGCSIKCSFCASGLNGLTRNLSFDEIINQ-YLMVKDKGY-------EIESI 82 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV-VPALDKLGDMIDVALAI 232 G+GEPLLN NV A + GLS V+ T+G + +L + + + Sbjct: 83 AFAGIGEPLLNWENVKQAFDYFKSQ---GLS---VSFYTTGFPISNFKQLLALNHDGVNL 136 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK-SNANQGRVTIEYVMLDHVNDGTEH 291 SLH+ +E R ++P + I + + +L++ SN + I Y+++ ND E Sbjct: 137 SLHSVFEEKRKSLIP--NSHTISQLIQVFKDHLQQLSNRKKKLYNIAYILIYGENDSYEE 194 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGF-TTIVRKTRGDD 350 +L E+ K+ ++L+ +N PY + R + L G T+ K R Sbjct: 195 IDKLGEIAKELGIGVSLLKYNEIEFFPYKSVPDDRYEELFLRLREKGIRVTLSNKYRTRK 254 Query: 351 IDAACGQL 358 I CG L Sbjct: 255 I-GGCGTL 261 >UniRef50_UPI0001910DA9 hypothetical protein Salmonellaentericaenterica_44633 n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI0001910DA9 Length = 56 Score = 94.4 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 44/56 (78%), Positives = 48/56 (85%), Gaps = 4/56 (7%) Query: 1 MSEQLVTPENVT----TKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHY 52 MSEQ+VTPE+ T + KINLLDLNRQQMREFFK+LGEKPFRADQVMKWMYHY Sbjct: 1 MSEQIVTPESSTPVVLNNETKINLLDLNRQQMREFFKNLGEKPFRADQVMKWMYHY 56 >UniRef50_C6AJK7 Protein YfgB n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AJK7_AGGAN Length = 77 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 38/56 (67%), Positives = 48/56 (85%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 K+NL++L R QMREFF +LGEKPFRADQ++KW+YH+ DNFD MT++NK LR KLK Sbjct: 17 KVNLMNLTRAQMREFFAELGEKPFRADQLVKWIYHFGEDNFDNMTNLNKKLREKLK 72 >UniRef50_B9PC33 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9PC33_POPTR Length = 302 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 10/116 (8%) Query: 17 KINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 K L+ L+R++M + +G + R Q+ W+Y +F M +I+K LR KL Sbjct: 187 KKPLIGLSREEMAQALASIGVPERQVNMRVRQLWHWLYVRGVSDFSRMFNISKELRAKLD 246 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ------RVETVYIPEDDRATLCVSSQ 122 E I PE+VEEQ S DGT KW + + VETVYIPE+DR TLC+SSQ Sbjct: 247 EHFTIARPEIVEEQISQDGTRKWLLRFPPRGAGRPVEVETVYIPEEDRGTLCISSQ 302 >UniRef50_A6GDS6 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDS6_9DELT Length = 291 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/302 (28%), Positives = 132/302 (43%), Gaps = 29/302 (9%) Query: 82 VVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 +VEE R DG ++ + + D VE V D +LCVSSQVGCA+ C FC++ G + Sbjct: 4 IVEEHREGDGNRRFVVGLDDGASVEAVLYRLD---SLCVSSQVGCAVGCPFCASGANGLD 60 Query: 141 RNLRVSEIIGQVWRA-AKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 R LR+ E+ GQV A I + V + G+GEPL N V + + Sbjct: 61 RPLRLGELTGQVEAVRAHIEATDGPEAALALRRVTVSGVGEPLHNHEPVAQFVRWCRE-- 118 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDMIDV-------ALAISLHAPNDEIRDEIVPINKKY 252 +L+TSG L +LG+ +D + S+HA + R VP Sbjct: 119 ----RDMPASLTTSGG--PLRRLGEWLDPDAAPPHNGITFSIHAGREATRARTVPRGPAL 172 Query: 253 N-IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + + L L +S + + + Y++L +NDG E E KI+L + Sbjct: 173 GPLFSLLGEAIPRLSRSRKRK--LALAYLLLADLNDGDEEIDAFLERAAPLGVKIHLYRY 230 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDID--AACGQLAGDVIDRTKRT 369 NP P + S++R + + + G VR++ I+ CG L + R +R Sbjct: 231 NPVPTSTQAPVSDARYQAIFERVRAVGLD--VRRSSQARIEDNGGCGTLI--ALRRPERR 286 Query: 370 LR 371 LR Sbjct: 287 LR 288 >UniRef50_C1SGI6 Predicted Fe-S-cluster redox enzyme n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGI6_9BACT Length = 256 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 29/224 (12%) Query: 104 VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK 163 +ETVY + TLC+S+Q GC + C FC++ + G RNL E+ QV + Sbjct: 16 LETVYY---ESGTLCISTQAGCRMACPFCASGRVGLKRNLSSDELFTQV----------E 62 Query: 164 VTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG 223 + I V + G+GEPL N ++ +F + K +S + VP +KL Sbjct: 63 LHKGNDIKRVTLSGIGEPLDNFE--------VVKEF---IKKSGYPVSVTTSVPDTEKLK 111 Query: 224 DMIDVA---LAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYV 280 +++ ++ + +S HA DE R +++P + + E F A + E S + +V Y+ Sbjct: 112 ELLKLSHNGVMLSFHAGFDETRKKLIPKACQLD-EIFHAVSEVWSEISVNKRKKVGFNYM 170 Query: 281 MLDHVNDGTEHAHQLA-ELLKDTPCKINLIPWNPFPGAPYGRSS 323 +LD +ND E A ++ ++L+ N G+ + S Sbjct: 171 LLDGINDSAEELDAFAGQVTNFKEVTVHLLVCNDVSGSSFKSPS 214 >UniRef50_Q5UP06 Uncharacterized protein R756 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=YR756_MIMIV Length = 298 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/284 (21%), Positives = 127/284 (44%), Gaps = 36/284 (12%) Query: 105 ETVYIPEDDRA-TLCVSSQVGCALECKFC---STAQQGFNRNLRVSEIIGQVWRAAKIVG 160 E Y+ +D+ + +SS GC + CKFC +T Q F R++ + E Q+ + Sbjct: 22 ECRYVRRNDKYISAYLSSHNGCKMACKFCWLTATNQTNF-RHVSIEEYANQL--DTVLSH 78 Query: 161 AAKVTGQRP---ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK---RRVTLSTSG 214 ++ G+ N+ +M GE L N N+V + + + ++K + ++ S Sbjct: 79 GKEIDGENSRIVRVNINLMSRGEALAN-KNLVNNYDKFHKELQYIINKYDYSEMKMNVST 137 Query: 215 VVPALDKLGDMID------VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS 268 ++P + + +ID V + SL++ N+ R + +P + +Y I A+R+ E Sbjct: 138 IMPKVVEHKKLIDIFGDRPVNIYYSLYSTNESFRKKWIPNSMRYEI-----ALRKLREFQ 192 Query: 269 NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD---TPCKINLIPWNPFPG-APYGRSSN 324 + + +++ ND +AE+++ + K NL+ +NP P + Y S Sbjct: 193 KETDNTIAFHFAVIEDENDNLSDVQSMAEIIRSMNFSKTKFNLVRFNPHPSMSNYKEPSV 252 Query: 325 SRIDRFSKVLMSYGFTTIVRKTR-------GDDIDAACGQLAGD 361 ++++ ++L S ++ R G D+ A+CG + Sbjct: 253 EKLEKIYEILQSVCNDETIKTNRSRIVPRIGQDVLASCGMFVDN 296 >UniRef50_A7AF87 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AF87_9PORP Length = 260 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 17/201 (8%) Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN 172 +R + VS+ GC + CKFC+T RNL EI+GQV A + G N Sbjct: 57 ERWMIGVSTMSGCPVRCKFCATGNMKRYRNLTADEIVGQVEFAIEQAGFDPCDANEFKIN 116 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAI 232 MGEP LN+ V A+ + + + +ST G + D +V L I Sbjct: 117 YTR--MGEPFLNIEAVKEAIGRISEIY----PNTHHYVSTIG-IKGSDFSFVKGNVTLQI 169 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 SLH+ ++E R+ ++P KK +IE L +R +SN + TI +++ + TE Sbjct: 170 SLHSFDEEKRNWLIPYPKKMSIEE-LGRIRT---ESNL---KTTINLTLVNESDFDTE-- 220 Query: 293 HQLAELLKDTPCKINLIPWNP 313 +L + + L P NP Sbjct: 221 -KLEKYFDKEYFFVKLSPINP 240 >UniRef50_D0MX91 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MX91_PHYIN Length = 170 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 281 MLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLMS-YG 338 ML VND E AH L +LL++ +NLIP+N GA + S I F VL Y Sbjct: 1 MLAGVNDSIETAHTLGKLLQNRSVHVNLIPYNTTDVGAQFQSPSAEDIRAFHAVLREPYN 60 Query: 339 FTTIVRKTRGDDIDAACGQLA 359 +R+ G DID ACGQLA Sbjct: 61 LKATIRENHGTDIDGACGQLA 81 >UniRef50_C7RH90 Fe-S-cluster redox enzyme-like protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RH90_ANAPD Length = 322 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGA 161 +RVE + + +D+ + VSSQ GC + C FC + GF+ N V+E+I ++ + G Sbjct: 46 ERVENIEVDLNDKLVVTVSSQKGCPMNCNFCDCPKLGFHGNSSVAELISEISTGIALSGV 105 Query: 162 AKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 GQR NV MGEP N N + A Sbjct: 106 K--DGQR--LNVHYARMGEPTFNFNVIESA 131 >UniRef50_C0B8Y0 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B8Y0_9FIRM Length = 85 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 37/57 (64%) Query: 26 QQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 ++++E +GEK FR+ Q+ W++ D+F+EMT++ K LR KL+ EIR E+ Sbjct: 12 EELQEEMLAIGEKGFRSRQIYSWIHEKLVDDFEEMTNLPKTLRQKLESAYEIRRVEM 68 >UniRef50_C5K6S8 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K6S8_9ALVE Length = 92 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 291 HAHQLAELLKDTPCK------INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVR 344 HA LA+L+KD P + INL+P+N ++F +L + G TT R Sbjct: 4 HARALAQLIKDRPKQTSYLYHINLLPYNEARDVSTAFKRCEDWNQFQSILTNEGITTSFR 63 Query: 345 KTRGDDIDAACGQL 358 + G IDAACGQL Sbjct: 64 NSFGRSIDAACGQL 77 >UniRef50_UPI00016C3CF8 hypothetical protein GobsU_10628 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CF8 Length = 313 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 60/305 (19%) Query: 90 DGTIKWAIAVGDQRVETVYIPE-DDRATLCVSSQVGCALECKFCSTAQQG--------FN 140 D ++ W R+E Y+ +D +SSQ GCA C+ C G FN Sbjct: 19 DASVNWDRPAEVGRLEARYVRRCEDYFVAYLSSQTGCAQACRMCHLTATGQTHLRDTTFN 78 Query: 141 RNLRVSEIIGQVWR----AAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 L +E + +R A+ V + P+ + V+ G+ LL E+ Sbjct: 79 EFLEQAETVLAHYRREGKPARAVHFNLMARGEPLASKVIATRGDELLG--------ELSR 130 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGD--MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 G GL R + S + P GD + DV +H P EI I +++++ Sbjct: 131 LAVGSGLRPRHL---ISTIYP--KAFGDRALEDV---FVVHQP--EIHYSIYSVSERFR- 179 Query: 255 ETFLAAVRRYLEKSN---------ANQGRVTIEYVMLDHV-----NDGTEHAHQLAELLK 300 RR+L K++ A R +++ V+L H ND H + + L+ Sbjct: 180 -------RRWLPKAHPAEVALDRLAAWQRHSLKLVVLHHAYIAGENDTEGDVHAICDALE 232 Query: 301 DTP--CKINLIPWNPFPGAPYG-RSSNSRIDRFSKVLMSY--GFTTIVRKTRGDDIDAAC 355 + IN++ +NPF A +G + ++R + + G +V G D+ A+C Sbjct: 233 ERKLMAHINVVRYNPFDPARHGTEPPEAVVERNAAIYRERLPGARVVVIARVGFDVAASC 292 Query: 356 GQLAG 360 G G Sbjct: 293 GMFLG 297 >UniRef50_B3FJU2 Putative uncharacterized protein n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJU2_9CAUD Length = 302 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/294 (23%), Positives = 112/294 (38%), Gaps = 61/294 (20%) Query: 103 RVETVYIPE-DDRATLCVSSQVGCALECKFC--STAQQGFNRNLRVSEIIGQVWRA---- 155 R+E ++ DD + +SSQ GC C+ C + Q +R++ V E Q R Sbjct: 30 RLEARFVQRVDDYFIVYLSSQTGCKQACRMCWLTATGQTDSRDVTVQEYFEQAERVFDHY 89 Query: 156 AKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI------MLDDFG--------- 200 +V V + M GEPL N + V A EI M + +G Sbjct: 90 IDMVRNNHVGSAATKVHFNFMARGEPLANKHFVENADEILRGLKRMAEQWGLEAKFLIST 149 Query: 201 -----FGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 FG +K + V P L SL++ N + R + +P K E Sbjct: 150 IWPKEFGFTKLTDVFTDPEVYP-----------ELYYSLYSLNPKFRKQWLP--KAAAPE 196 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI--NLIPWNP 313 T L ++ + E + I Y ++ ND + + +K+ K+ N++ +NP Sbjct: 197 TALDELKCWQEATGKTP---KIHYAFINDQNDSIGDVKAIIDEIKEVGLKVNWNIVRYNP 253 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGF---------TTIVRKTRGDDIDAACGQL 358 P G S ++ K L +GF ++ + G D+ A+CG Sbjct: 254 ----PEGHYSKEPVEGHVKYL--HGFIQRHLPDAKVKLIPRV-GTDVKASCGTF 300 >UniRef50_A7HKB3 Radical SAM domain protein n=12 Tax=cellular organisms RepID=A7HKB3_FERNB Length = 329 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 17/152 (11%) Query: 109 IPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR 168 IP D + L VS+ GC + CK C A + R L EI+ Q+ + ++ + Sbjct: 53 IPRDKKWVLIVSTMDGCPVGCKMCD-AGGYYKRRLSKEEILAQILYLIR----SRYEDEV 107 Query: 169 PIT--NVVMMGMGEPLLN--LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD 224 P+ + +GEP LN + V+ + ++D GL T++ G ++L + Sbjct: 108 PVEKFKIQFARVGEPALNDEVLKVLDELPQIID--APGLMPSISTVAPIGRNGWFERLIE 165 Query: 225 MID------VALAISLHAPNDEIRDEIVPINK 250 + + L S+H+ +++ RDEI+P+ K Sbjct: 166 IKEKHYRGKFQLQFSIHSTDEKQRDEIIPVKK 197 >UniRef50_P0A9N6 Pyruvate formate-lyase 1-activating enzyme n=287 Tax=Bacteria RepID=PFLA_ECO57 Length = 246 Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 15/109 (13%) Query: 210 LSTSGVV----PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYL 265 L T+G V P +D+L ++ D+ + + L NDEI +V ++ +E +YL Sbjct: 104 LDTNGFVRRYDPVIDELLEVTDLVM-LDLKQMNDEIHQNLVGVSNHRTLE-----FAKYL 157 Query: 266 EKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWN 312 N +V I YV++ +D + AH+L E +D KI L+P++ Sbjct: 158 ANKNV---KVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH 203 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q6FEM6 Ribosomal RNA large subunit methyltransferase N ... 504 e-141 UniRef50_B2U9U6 Ribosomal RNA large subunit methyltransferase N ... 495 e-139 UniRef50_B7H072 Ribosomal RNA large subunit methyltransferase N ... 495 e-138 UniRef50_Q5P7B0 Ribosomal RNA large subunit methyltransferase N ... 490 e-137 UniRef50_A4SYE2 Ribosomal RNA large subunit methyltransferase N ... 487 e-136 UniRef50_Q3BTW5 Ribosomal RNA large subunit methyltransferase N ... 486 e-136 UniRef50_B8CWT1 Radical SAM enzyme, Cfr family n=2 Tax=Firmicute... 481 e-134 UniRef50_Q8D1Y5 Ribosomal RNA large subunit methyltransferase N ... 478 e-133 UniRef50_Q6ALW1 Ribosomal RNA large subunit methyltransferase N ... 473 e-132 UniRef50_Q2W897 Ribosomal RNA large subunit methyltransferase N ... 472 e-131 UniRef50_Q5LY98 Ribosomal RNA large subunit methyltransferase N ... 471 e-131 UniRef50_Q2N9J2 Ribosomal RNA large subunit methyltransferase N ... 470 e-131 UniRef50_Q2LUM5 Ribosomal RNA large subunit methyltransferase N ... 468 e-130 UniRef50_Q1D6I6 Ribosomal RNA large subunit methyltransferase N ... 466 e-130 UniRef50_C4Z523 Ribosomal RNA large subunit methyltransferase N ... 466 e-130 UniRef50_A3DCX9 Ribosomal RNA large subunit methyltransferase N ... 463 e-129 UniRef50_Q3SNT2 Ribosomal RNA large subunit methyltransferase N ... 462 e-129 UniRef50_A1VAL8 Ribosomal RNA large subunit methyltransferase N ... 462 e-128 UniRef50_A5CX33 Ribosomal RNA large subunit methyltransferase N ... 462 e-128 UniRef50_B9KXX2 Radical SAM enzyme, Cfr family n=2 Tax=Thermomic... 462 e-128 UniRef50_Q3A2Z4 Ribosomal RNA large subunit methyltransferase N ... 460 e-128 UniRef50_D1CBZ4 Radical SAM enzyme, Cfr family n=1 Tax=Thermobac... 459 e-128 UniRef50_C5EIZ2 Radical SAM enzyme n=11 Tax=Clostridiales RepID=... 458 e-127 UniRef50_A9KM95 Ribosomal RNA large subunit methyltransferase N ... 458 e-127 UniRef50_D0LIH5 Radical SAM enzyme, Cfr family n=2 Tax=Nannocyst... 457 e-127 UniRef50_D1Y601 23S rRNA m2A2503 methyltransferase n=1 Tax=Pyram... 457 e-127 UniRef50_B8DRU2 Ribosomal RNA large subunit methyltransferase N ... 457 e-127 UniRef50_B6BF31 Radical SAM enzyme, Cfr family n=1 Tax=Rhodobact... 457 e-127 UniRef50_B5YF42 Ribosomal RNA large subunit methyltransferase N ... 455 e-126 UniRef50_C0GIQ5 Radical SAM enzyme, Cfr family n=1 Tax=Dethiobac... 455 e-126 UniRef50_B0UQR1 Ribosomal RNA large subunit methyltransferase N ... 455 e-126 UniRef50_B5EJF0 Radical SAM enzyme, Cfr family n=2 Tax=Acidithio... 454 e-126 UniRef50_Q7UHU7 Ribosomal RNA large subunit methyltransferase N ... 453 e-126 UniRef50_A4ECT0 Putative uncharacterized protein n=3 Tax=Collins... 453 e-126 UniRef50_Q54J76 Putative uncharacterized protein n=1 Tax=Dictyos... 453 e-126 UniRef50_A6TRW3 Ribosomal RNA large subunit methyltransferase N ... 453 e-126 UniRef50_D1PM67 Radical SAM enzyme, Cfr family n=1 Tax=Subdoligr... 451 e-125 UniRef50_Q2RK16 Ribosomal RNA large subunit methyltransferase N ... 451 e-125 UniRef50_B0TGT1 Ribosomal RNA large subunit methyltransferase N ... 450 e-125 UniRef50_A9WFY6 Ribosomal RNA large subunit methyltransferase N ... 449 e-125 UniRef50_C1TNK6 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=De... 447 e-124 UniRef50_B8HRU7 Radical SAM enzyme, Cfr family n=2 Tax=Chroococc... 447 e-124 UniRef50_A8ZV25 Ribosomal RNA large subunit methyltransferase N ... 447 e-124 UniRef50_Q1DCU1 Ribosomal RNA large subunit methyltransferase N ... 447 e-124 UniRef50_C9M5U8 Radical SAM enzyme, Cfr family n=1 Tax=Jonquetel... 447 e-124 UniRef50_Q6MDD0 Ribosomal RNA large subunit methyltransferase N ... 446 e-124 UniRef50_D2RNU4 Radical SAM enzyme, Cfr family n=1 Tax=Acidamino... 444 e-123 UniRef50_Q2S0P9 Ribosomal RNA large subunit methyltransferase N ... 443 e-123 UniRef50_Q3AC22 Ribosomal RNA large subunit methyltransferase N ... 443 e-123 UniRef50_A7ZGB0 Ribosomal RNA large subunit methyltransferase N ... 443 e-123 UniRef50_Q72HC1 Ribosomal RNA large subunit methyltransferase N ... 442 e-123 UniRef50_A4XL78 Ribosomal RNA large subunit methyltransferase N ... 442 e-122 UniRef50_Q7X370 Putative uncharacterized protein n=2 Tax=uncultu... 441 e-122 UniRef50_Q1Q215 Putative uncharacterized protein n=1 Tax=Candida... 440 e-122 UniRef50_A5UT23 Ribosomal RNA large subunit methyltransferase N ... 440 e-122 UniRef50_A5D1B6 Ribosomal RNA large subunit methyltransferase N ... 439 e-122 UniRef50_Q0AXL8 Ribosomal RNA large subunit methyltransferase N ... 439 e-121 UniRef50_C6I0U3 Radical SAM family protein n=3 Tax=Leptospirillu... 438 e-121 UniRef50_C0WD85 Ribosomal RNA large subunit methyltransferase N ... 438 e-121 UniRef50_C5CGV5 Radical SAM enzyme, Cfr family n=1 Tax=Kosmotoga... 438 e-121 UniRef50_C9KJ31 Radical SAM enzyme, Cfr family n=1 Tax=Mitsuokel... 438 e-121 UniRef50_B9XSY7 Radical SAM enzyme, Cfr family n=1 Tax=bacterium... 438 e-121 UniRef50_B2A2K6 Ribosomal RNA large subunit methyltransferase N ... 437 e-121 UniRef50_A7HNQ1 Ribosomal RNA large subunit methyltransferase N ... 436 e-121 UniRef50_Q6MPV7 Ribosomal RNA large subunit methyltransferase N ... 434 e-120 UniRef50_C7NA88 Radical SAM enzyme, Cfr family n=5 Tax=Fusobacte... 434 e-120 UniRef50_B5YHG3 Radical SAM enzyme, Cfr family n=1 Tax=Thermodes... 433 e-120 UniRef50_D2R822 Radical SAM enzyme, Cfr family n=1 Tax=Pirellula... 433 e-120 UniRef50_D1B0V3 Radical SAM enzyme, Cfr family n=10 Tax=Campylob... 433 e-120 UniRef50_B8FS78 Ribosomal RNA large subunit methyltransferase N ... 433 e-120 UniRef50_C8W8J4 Radical SAM enzyme, Cfr family n=3 Tax=Coriobact... 432 e-120 UniRef50_C1A949 Ribosomal RNA large subunit methyltransferase N ... 432 e-120 UniRef50_B2A0B9 Ribosomal RNA large subunit methyltransferase N ... 432 e-119 UniRef50_B9E1E5 Putative uncharacterized protein n=2 Tax=Clostri... 431 e-119 UniRef50_Q2J713 Ribosomal RNA large subunit methyltransferase N ... 431 e-119 UniRef50_B9CLR1 Radical SAM enzyme, Cfr family n=1 Tax=Atopobium... 430 e-119 UniRef50_C0BG68 Radical SAM enzyme, Cfr family n=1 Tax=Flavobact... 429 e-119 UniRef50_O66732 Ribosomal RNA large subunit methyltransferase N ... 428 e-118 UniRef50_O80746 T13D8.12 protein n=9 Tax=Spermatophyta RepID=O80... 428 e-118 UniRef50_C8WPW3 Radical SAM enzyme, Cfr family n=3 Tax=Coriobact... 426 e-118 UniRef50_Q11QF0 Ribosomal RNA large subunit methyltransferase N ... 426 e-118 UniRef50_D0RN88 Radical SAM enzyme, Cfr family n=1 Tax=alpha pro... 425 e-117 UniRef50_Q2JMN2 Ribosomal RNA large subunit methyltransferase N ... 424 e-117 UniRef50_B2J6D0 Ribosomal RNA large subunit methyltransferase N ... 424 e-117 UniRef50_A9A3L9 Ribosomal RNA large subunit methyltransferase N ... 423 e-117 UniRef50_Q8RFZ9 Ribosomal RNA large subunit methyltransferase N ... 422 e-116 UniRef50_A8DJI2 Radical SAM enzyme Cfr family protein n=1 Tax=Ca... 421 e-116 UniRef50_B2RMI0 Ribosomal RNA large subunit methyltransferase N ... 420 e-116 UniRef50_C7RGU3 Radical SAM enzyme, Cfr family n=5 Tax=Anaerococ... 420 e-116 UniRef50_B3QS43 Ribosomal RNA large subunit methyltransferase N ... 420 e-116 UniRef50_D1B6H8 Radical SAM enzyme, Cfr family n=1 Tax=Thermanae... 419 e-116 UniRef50_A4SEQ5 Ribosomal RNA large subunit methyltransferase N ... 419 e-116 UniRef50_A9S1C9 Predicted protein n=1 Tax=Physcomitrella patens ... 417 e-115 UniRef50_C9LG49 Radical SAM enzyme, Cfr family n=16 Tax=Bacteria... 416 e-115 UniRef50_Q3ASD4 Ribosomal RNA large subunit methyltransferase N ... 415 e-114 UniRef50_Q0F2U6 Putative uncharacterized protein n=1 Tax=Maripro... 415 e-114 UniRef50_A8SLZ1 Putative uncharacterized protein n=1 Tax=Parvimo... 414 e-114 UniRef50_UPI000050FC81 radical SAM enzyme, Cfr family protein n=... 413 e-114 UniRef50_UPI00016C54F2 hypothetical protein GobsU_25056 n=1 Tax=... 411 e-113 UniRef50_Q01QF9 Ribosomal RNA large subunit methyltransferase N ... 411 e-113 UniRef50_D1BMC5 Radical SAM enzyme, Cfr family n=3 Tax=Veillonel... 410 e-113 UniRef50_A9FFJ6 Ribosomal RNA large subunit methyltransferase N ... 409 e-113 UniRef50_C9LLK4 Radical SAM enzyme, Cfr family n=1 Tax=Dialister... 409 e-113 UniRef50_A0LV48 Ribosomal RNA large subunit methyltransferase N ... 409 e-113 UniRef50_B1ZVM5 Ribosomal RNA large subunit methyltransferase N ... 409 e-113 UniRef50_Q0F1H4 Radical SAM superfamily protein n=1 Tax=Mariprof... 407 e-112 UniRef50_B9HMI5 Predicted protein n=1 Tax=Populus trichocarpa Re... 407 e-112 UniRef50_C9RKM0 Radical SAM enzyme, Cfr family n=1 Tax=Fibrobact... 405 e-111 UniRef50_C1EEM6 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 405 e-111 UniRef50_C0QZJ2 Predicted Fe-S-cluster redox enzyme n=2 Tax=Brac... 405 e-111 UniRef50_B7FZP4 Predicted protein (Fragment) n=2 Tax=Bacillariop... 403 e-111 UniRef50_B0S143 Ribosomal RNA large subunit methyltransferase N ... 402 e-110 UniRef50_C1SKY4 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=De... 402 e-110 UniRef50_UPI0001C31CDE radical SAM enzyme, Cfr family n=1 Tax=Co... 400 e-110 UniRef50_Q1AYW0 Ribosomal RNA large subunit methyltransferase N ... 394 e-108 UniRef50_C7NGZ4 Radical SAM enzyme, Cfr family n=1 Tax=Kytococcu... 393 e-108 UniRef50_C1F813 Radical SAM enzyme, Cfr family n=1 Tax=Acidobact... 391 e-107 UniRef50_Q7V010 Ribosomal RNA large subunit methyltransferase N ... 389 e-107 UniRef50_A6DSV2 YloN n=1 Tax=Lentisphaera araneosa HTCC2155 RepI... 389 e-107 UniRef50_B0VIB4 Putative radical SAM-dependent enzyme (YfgB) n=1... 389 e-107 UniRef50_B0MQA1 Putative uncharacterized protein n=1 Tax=Eubacte... 385 e-105 UniRef50_D1N5Y0 Radical SAM enzyme, Cfr family n=1 Tax=Victivall... 382 e-104 UniRef50_D1VSE2 Radical SAM enzyme, Cfr family n=1 Tax=Peptoniph... 381 e-104 UniRef50_A8I3K8 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 380 e-104 UniRef50_B1H070 Ribosomal RNA large subunit methyltransferase N ... 379 e-103 UniRef50_C7M235 Radical SAM enzyme, Cfr family n=1 Tax=Acidimicr... 378 e-103 UniRef50_B3DX07 Radical SAM family enzyme n=1 Tax=Methylacidiphi... 378 e-103 UniRef50_B2KDX7 Radical SAM enzyme, Cfr family n=1 Tax=Elusimicr... 377 e-103 UniRef50_C1E6J0 Predicted protein n=2 Tax=Micromonas RepID=C1E6J... 375 e-102 UniRef50_C8PSX7 Radical SAM enzyme, Cfr family n=1 Tax=Treponema... 373 e-102 UniRef50_B1C5S5 Putative uncharacterized protein n=1 Tax=Anaerof... 373 e-102 UniRef50_B1ZQZ5 Ribosomal RNA large subunit methyltransferase N ... 373 e-102 UniRef50_A4RXU8 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 370 e-101 UniRef50_C0QD94 Putative uncharacterized protein n=1 Tax=Desulfo... 369 e-101 UniRef50_A9V4C5 Predicted protein n=2 Tax=Fungi/Metazoa group Re... 366 e-100 UniRef50_D1R7C7 Putative uncharacterized protein n=1 Tax=Parachl... 365 1e-99 UniRef50_B9EX01 Putative uncharacterized protein n=1 Tax=Oryza s... 365 2e-99 UniRef50_Q01GU0 Radical SAM domain-containing protein-like (ISS)... 363 5e-99 UniRef50_C1EAY2 Predicted protein n=3 Tax=Eukaryota RepID=C1EAY2... 363 7e-99 UniRef50_C7GZA9 Radical SAM enzyme, Cfr family n=1 Tax=Eubacteri... 363 7e-99 UniRef50_A8I8N2 Predicted Fe-S-cluster redox enzyme n=1 Tax=Chla... 363 7e-99 UniRef50_A7GH77 Ribosomal RNA large subunit methyltransferase cf... 363 8e-99 UniRef50_Q6MED6 Ribosomal RNA large subunit methyltransferase N ... 359 7e-98 UniRef50_Q9LJN3 Gb|AAF41683.1 n=13 Tax=Magnoliophyta RepID=Q9LJN... 359 1e-97 UniRef50_Q5WJ42 Ribosomal RNA large subunit methyltransferase cf... 357 4e-97 UniRef50_B2S216 Ribosomal RNA large subunit methyltransferase N ... 356 1e-96 UniRef50_B0SGA8 Ribosomal RNA large subunit methyltransferase N ... 351 3e-95 UniRef50_A4RV36 Predicted protein (Fragment) n=3 Tax=Viridiplant... 347 4e-94 UniRef50_A6DL87 Putative uncharacterized protein n=1 Tax=Lentisp... 344 3e-93 UniRef50_C1E2Q2 Predicted protein (Fragment) n=1 Tax=Micromonas ... 342 2e-92 UniRef50_B8ZNC2 Radical SAM superfamily protein n=7 Tax=Streptoc... 341 2e-92 UniRef50_B4U5N7 Radical SAM enzyme, Cfr family n=1 Tax=Hydrogeno... 341 3e-92 UniRef50_A9FD89 Probable RNA methyltransferase sce1580 n=1 Tax=S... 338 2e-91 UniRef50_B7S3M1 Predicted protein n=2 Tax=Phaeodactylum tricornu... 334 5e-90 UniRef50_B6AEB0 Radical SAM domain-containing protein n=1 Tax=Cr... 334 5e-90 UniRef50_Q1CYE1 Probable RNA methyltransferase MXAN_6459 n=2 Tax... 332 2e-89 UniRef50_Q8IM25 Radical SAM protein, putative n=5 Tax=Aconoidasi... 329 1e-88 UniRef50_B5JDK5 Radical SAM enzyme, Cfr family n=1 Tax=Verrucomi... 327 4e-88 UniRef50_D2VS80 Predicted protein n=1 Tax=Naegleria gruberi RepI... 323 8e-87 UniRef50_C1ZMH3 23S rRNA m(2)A-2503 methyltransferase n=3 Tax=Pl... 322 1e-86 UniRef50_C7GI13 Radical SAM enzyme, Cfr family n=15 Tax=Clostrid... 318 2e-85 UniRef50_Q7UPG1 Probable RNA methyltransferase RB6963 n=2 Tax=Pl... 318 2e-85 UniRef50_Q136A2 Probable RNA methyltransferase RPD_2859 n=1 Tax=... 317 4e-85 UniRef50_Q5CQD5 Conserved protein with transmembrane region at C... 316 7e-85 UniRef50_B7FTW5 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 316 7e-85 UniRef50_Q2Z000 Putative uncharacterized protein n=1 Tax=uncultu... 316 1e-84 UniRef50_B5Y3J7 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 311 3e-83 UniRef50_A4S5T8 Predicted protein n=7 Tax=Viridiplantae RepID=A4... 311 4e-83 UniRef50_Q2IHD1 Probable RNA methyltransferase Adeh_4229 n=4 Tax... 309 1e-82 UniRef50_Q01C13 Homology to unknown gene n=1 Tax=Ostreococcus ta... 307 3e-82 UniRef50_B6KPF5 Radical SAM domain-containing protein n=4 Tax=To... 300 5e-80 UniRef50_A9EPV3 Probable RNA methyltransferase sce3898 n=1 Tax=S... 299 1e-79 UniRef50_B8LDJ4 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 289 2e-76 UniRef50_Q3SHI2 Probable RNA methyltransferase Tbd_1951 n=22 Tax... 280 8e-74 UniRef50_B3LAU1 Radical SAM protein, putative n=4 Tax=Plasmodium... 276 1e-72 UniRef50_B6KND1 GPI transamidase 8, putative n=3 Tax=Toxoplasma ... 273 7e-72 UniRef50_C6P0S6 Radical SAM domain protein n=1 Tax=Sideroxydans ... 271 4e-71 UniRef50_B8BRJ2 Predicted protein n=1 Tax=Thalassiosira pseudona... 263 1e-68 UniRef50_C5KHT4 Putative uncharacterized protein n=1 Tax=Perkins... 259 1e-67 UniRef50_UPI0001698B51 radical SAM enzyme, Cfr family protein n=... 256 1e-66 UniRef50_A8J882 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 254 6e-66 UniRef50_B1AIK2 Putative uncharacterized protein n=15 Tax=Ureapl... 245 2e-63 UniRef50_D0MX90 Ribosomal RNA large subunit methyltransferase N,... 233 8e-60 UniRef50_Q3EPJ3 Radical SAM family enzyme n=1 Tax=Bacillus thuri... 232 2e-59 UniRef50_C0QTQ8 Radical SAM enzyme, Cfr family n=4 Tax=Aquifical... 231 3e-59 UniRef50_UPI00006DCC08 hypothetical protein CdifQ_04003012 n=1 T... 219 1e-55 UniRef50_Q4HQT8 Radical SAM enzyme, Cfr family n=1 Tax=Campyloba... 216 9e-55 UniRef50_C1DT21 Radical SAM enzyme, Cfr family n=3 Tax=Sulfurihy... 215 2e-54 UniRef50_C5K4P4 Putative uncharacterized protein n=2 Tax=Perkins... 200 7e-50 UniRef50_C1SGI6 Predicted Fe-S-cluster redox enzyme n=1 Tax=Deni... 188 3e-46 UniRef50_A6GDS6 Putative uncharacterized protein n=1 Tax=Plesioc... 186 7e-46 UniRef50_B8CKQ7 Putative uncharacterized protein n=1 Tax=Shewane... 170 6e-41 UniRef50_Q5UP06 Uncharacterized protein R756 n=1 Tax=Acanthamoeb... 163 7e-39 UniRef50_A7AF87 Putative uncharacterized protein n=1 Tax=Parabac... 153 1e-35 UniRef50_UPI0001698B52 radical SAM enzyme, Cfr family protein n=... 145 2e-33 UniRef50_UPI00016C3CF8 hypothetical protein GobsU_10628 n=1 Tax=... 140 7e-32 UniRef50_B9PC33 Predicted protein (Fragment) n=1 Tax=Populus tri... 126 2e-27 UniRef50_D0MX91 Putative uncharacterized protein n=1 Tax=Phytoph... 109 1e-22 UniRef50_UPI000190F78A hypothetical protein Salmonentericaenteri... 100 1e-19 UniRef50_C7RH90 Fe-S-cluster redox enzyme-like protein n=1 Tax=A... 99 2e-19 UniRef50_C5K6S8 Putative uncharacterized protein n=1 Tax=Perkins... 89 2e-16 UniRef50_C6AJK7 Protein YfgB n=1 Tax=Aggregatibacter aphrophilus... 86 2e-15 UniRef50_C0B8Y0 Putative uncharacterized protein n=1 Tax=Coproco... 82 4e-14 UniRef50_UPI0001910DA9 hypothetical protein Salmonellaentericaen... 75 5e-12 Sequences not found previously or not previously below threshold: UniRef50_B3FJU2 Putative uncharacterized protein n=1 Tax=Pseudom... 124 7e-27 UniRef50_A7HKB3 Radical SAM domain protein n=12 Tax=cellular org... 119 2e-25 UniRef50_UPI0001BCD1E1 ribosomal RNA large subunit methyltransfe... 85 6e-15 UniRef50_C1FL59 Glycyl-radical enzyme activating family protein ... 70 1e-10 UniRef50_Q97JT3 Predicted Fe-S-cluster redox enzyme, YLON B.subt... 70 2e-10 UniRef50_C3WY92 Fe-S oxidoreductase n=12 Tax=Fusobacterium RepID... 64 1e-08 UniRef50_O67929 Molybdenum cofactor biosynthesis protein A n=2 T... 63 2e-08 UniRef50_UPI0001978349 hypothetical protein HcanM9_08523 n=1 Tax... 62 4e-08 UniRef50_C2BHE9 [formate-C-acetyltransferase]-activating enzyme ... 61 7e-08 UniRef50_UPI0001BC586B Fe-S oxidoreductase n=3 Tax=Fusobacterium... 60 1e-07 UniRef50_B8DR83 Nitrogenase cofactor biosynthesis protein NifB n... 58 5e-07 UniRef50_B8DNV6 Radical SAM domain protein n=13 Tax=Desulfovibri... 58 5e-07 UniRef50_C0QGR9 PflC1 n=1 Tax=Desulfobacterium autotrophicum HRM... 57 9e-07 UniRef50_Q080J6 Pyruvate formate-lyase activating enzyme n=12 Ta... 57 1e-06 UniRef50_A8AAC8 Radical SAM domain protein n=1 Tax=Ignicoccus ho... 57 1e-06 UniRef50_A4YHJ1 Wyosine base formation n=2 Tax=Archaea RepID=A4Y... 56 2e-06 UniRef50_B6YRJ3 Nitrogenase molybdenum-cofactor biosynthesis pro... 56 2e-06 UniRef50_B1C5Q0 Putative uncharacterized protein n=1 Tax=Anaerof... 56 2e-06 UniRef50_A7ZEI0 Nitrogenase cofactor biosynthesis protein NifB n... 56 2e-06 UniRef50_A5G750 Radical SAM domain protein n=8 Tax=cellular orga... 56 3e-06 UniRef50_C5A4P1 Radical SAM protein, elongator protein 3/MiaB/Ni... 55 3e-06 UniRef50_C5CI47 Radical SAM domain protein n=1 Tax=Kosmotoga ole... 55 4e-06 UniRef50_Q9V177 MooA-like molybdenum cofactor biosynthesis prote... 55 4e-06 UniRef50_O27899 Nitrogenase iron-molybdenum cofactor biosynthesi... 55 5e-06 UniRef50_D1N689 Radical SAM domain protein n=1 Tax=Victivallis v... 54 6e-06 UniRef50_A7I2S9 Radical SAM domain protein n=1 Tax=Campylobacter... 54 1e-05 UniRef50_Q8TXS8 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyr... 54 1e-05 UniRef50_A5GBP2 Radical SAM domain protein n=1 Tax=Geobacter ura... 54 1e-05 UniRef50_D1SBC6 Pyruvate formate-lyase activating enzyme n=2 Tax... 54 1e-05 UniRef50_A4J0I5 Pyruvate formate-lyase activating enzyme n=1 Tax... 53 1e-05 UniRef50_A0LJ51 Radical SAM domain protein n=4 Tax=Deltaproteoba... 53 2e-05 UniRef50_Q7MSJ9 Putative uncharacterized protein n=1 Tax=Wolinel... 53 2e-05 UniRef50_B1I6P5 Radical SAM domain protein n=2 Tax=Clostridiales... 53 3e-05 UniRef50_P0A9N6 Pyruvate formate-lyase 1-activating enzyme n=287... 52 3e-05 UniRef50_A5N1T7 NifK/nifB n=3 Tax=Clostridium RepID=A5N1T7_CLOK5 52 4e-05 UniRef50_C0BY63 Putative uncharacterized protein n=1 Tax=Clostri... 51 6e-05 UniRef50_A7HLP5 Radical SAM domain protein n=9 Tax=Thermotogacea... 51 7e-05 UniRef50_Q3ADK0 Radical SAM domain protein n=1 Tax=Carboxydother... 51 9e-05 UniRef50_C5K4P5 Putative uncharacterized protein n=1 Tax=Perkins... 51 9e-05 UniRef50_Q64CF5 Fe-S oxidoreductase n=2 Tax=environmental sample... 51 1e-04 UniRef50_B3EE07 Radical SAM domain protein n=10 Tax=Chlorobiacea... 50 1e-04 UniRef50_A3ZZE4 Putative uncharacterized protein n=2 Tax=Plancto... 50 2e-04 UniRef50_Q979T0 Probable molybdenum cofactor biosynthesis protei... 49 2e-04 UniRef50_D2RJC4 Pyruvate formate-lyase activating enzyme n=2 Tax... 49 2e-04 UniRef50_C7N5R9 KamA family protein n=1 Tax=Slackia heliotrinire... 49 2e-04 UniRef50_A9A0E2 Radical SAM domain protein n=1 Tax=Desulfococcus... 49 2e-04 >UniRef50_Q6FEM6 Ribosomal RNA large subunit methyltransferase N n=449 Tax=Proteobacteria RepID=RLMN_ACIAD Length = 414 Score = 504 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 216/381 (56%), Positives = 267/381 (70%), Gaps = 12/381 (3%) Query: 2 SEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMT 61 S T E K K+NLL ++R ++ +FF+ +GEK FRA Q+MKW++ Y + EMT Sbjct: 19 SASQTTVEQEVLK-SKVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMT 77 Query: 62 DINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR---VETVYIPEDD----R 114 +I+ LR KL++V EI+APEVV S DGT KW VG+ VETV IP +D R Sbjct: 78 NISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSR 137 Query: 115 ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAK--IVGAAKVTGQRPITN 172 TLC+SSQVGCAL+C FCST +QGF R+L +EIIGQ+W A + + R +TN Sbjct: 138 KTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTN 197 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAI 232 VVMMGMGEPLLN VV +M IMLDD+ +G+SKRRVTLSTSGVVP +DKL + +DVALAI Sbjct: 198 VVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAI 257 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNA--NQGRVTIEYVMLDHVNDGTE 290 SLHAPN+ +RDE+VPINKKY +E +AA +RY+ K + VTIEYVMLD VND E Sbjct: 258 SLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPE 317 Query: 291 HAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 HA QL +LLK+ P KINLIP+NPFP APYGRSS +RI F K L GF +R+TRGDD Sbjct: 318 HAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDD 377 Query: 351 IDAACGQLAGDVIDRTKRTLR 371 IDAACGQL G V DRT+R + Sbjct: 378 IDAACGQLVGQVADRTRRAEQ 398 >UniRef50_B2U9U6 Ribosomal RNA large subunit methyltransferase N n=47 Tax=Bacteria RepID=RLMN_RALPJ Length = 383 Score = 495 bits (1276), Expect = e-139, Method: Composition-based stats. Identities = 203/371 (54%), Positives = 257/371 (69%), Gaps = 7/371 (1%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 +NLLD + Q + + + LGEK FRA Q+ +W++ F EMTD+ K LR KL A I Sbjct: 5 VNLLDFDAQGLLAYCESLGEKSFRAKQLQRWIHQSGASEFGEMTDLAKSLREKLATRANI 64 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 +AP V+ + SSDGT KW + VG VETVYIPE+ R TLCVSSQ GCA+ C+FCST + Sbjct: 65 QAPAVISDHLSSDGTRKWLVDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGK 124 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTG---QRPITNVVMMGMGEPLLNLNNVVPAME 193 QGF+RNL EIIGQ+W A + G R ITNVVMMGMGEPLLN + VVPA+ Sbjct: 125 QGFSRNLSTGEIIGQLWMAEFAMRKQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPALA 184 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYN 253 +MLDD +GLS+RRVT+STSGVVP +D+L + VALA+SLHA ND +RD +VP+NKKY Sbjct: 185 LMLDDNAYGLSRRRVTVSTSGVVPMMDRLARDVPVALAVSLHASNDALRDVLVPLNKKYP 244 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + +AA RRYLE A + +T EY MLD VND EHA +L ++ D PCK NLIP+NP Sbjct: 245 LAELMAACRRYLEF--APRDFITFEYCMLDGVNDTVEHARELLRVVADVPCKFNLIPFNP 302 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 FP + RS+N +I RFS+VL+ G T +RKTRGDDIDAACGQLAG+V DRT+ R + Sbjct: 303 FPESGLKRSNNEQIRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKDRTRLAERGK 362 Query: 374 MQGEAIDIKAV 384 G+ ++I V Sbjct: 363 F-GKIVEIPVV 372 >UniRef50_B7H072 Ribosomal RNA large subunit methyltransferase N n=68 Tax=Proteobacteria RepID=RLMN_ACIB3 Length = 410 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 213/372 (57%), Positives = 265/372 (71%), Gaps = 11/372 (2%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + K+NLL ++R ++ +FF+D+GEK FRA QVMKW++ Y +F EMT+I+ LR K Sbjct: 23 ASPAAEKVNLLGMSRAELEKFFEDIGEKKFRAGQVMKWIHQYFVTDFAEMTNISGKLRAK 82 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR---VETVYIPEDD----RATLCVSSQV 123 L+++ EI+APEVV S DGT KW VG+ VETV IP +D R TLC+SSQV Sbjct: 83 LEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQV 142 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAK--IVGAAKVTGQRPITNVVMMGMGEP 181 GCAL+C FCST +QGF R+L EIIGQ+W A + +R +TNVVMMGMGEP Sbjct: 143 GCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANYSYMEEVPVAERERSVTNVVMMGMGEP 202 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEI 241 LLN + V+ +M IMLDDF +G+SKRRVTLSTSGVVP +D+L IDVALAISLHAPNDE+ Sbjct: 203 LLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGVVPKIDQLAKDIDVALAISLHAPNDEL 262 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNA--NQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 R+E+VPINKKY + +AA +RY+ K + VTIEYVML+ VND EHA QL +LL Sbjct: 263 RNELVPINKKYPLAQLIAACQRYIAKDGNESARKHVTIEYVMLEGVNDQPEHAQQLLKLL 322 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 K+ P KINLIP+NPFP APYGRSS +RI F K L GF +R+TRGDDIDAACGQL Sbjct: 323 KNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKTLSDAGFVCTIRQTRGDDIDAACGQLV 382 Query: 360 GDVIDRTKRTLR 371 G V DRT+R + Sbjct: 383 GQVADRTRRAEQ 394 >UniRef50_Q5P7B0 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Aromatoleum aromaticum EbN1 RepID=RLMN_AZOSE Length = 408 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 202/408 (49%), Positives = 259/408 (63%), Gaps = 48/408 (11%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +NLLD + + +F + GEKPFRA QVM+WM+ + +F MTD+ K LR KL E A Sbjct: 3 TPVNLLDFDVDGLVTWFAERGEKPFRARQVMRWMHRFGETDFGNMTDVAKSLRAKLAEEA 62 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 IRAP + + S DGT KW + VG VE V+IPE +R TLC+SSQ GCAL+C FCST Sbjct: 63 CIRAPRAIRDAVSVDGTRKWLLDVGSANAVEAVFIPETNRGTLCISSQAGCALDCAFCST 122 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGA--------------------------------- 161 +QGFNRNL +EIIGQ+W A +++G Sbjct: 123 GKQGFNRNLSAAEIIGQLWLANRLLGGSASPAGSKDGDGGPDHASRATKLDHRAADAKGV 182 Query: 162 ----------AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLS 211 + R I+NVVMMGMGEPL N +NVV A+ +MLDD +GLS+RRVT+S Sbjct: 183 QSDSWRSSDPEEDHNGRVISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGLSRRRVTVS 242 Query: 212 TSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNAN 271 TSG+VPA+D+L D VALA+SLHAP+D +RD +VPIN+KY + +AA +RYLE A Sbjct: 243 TSGIVPAMDRLRDECPVALAVSLHAPDDALRDRLVPINRKYPLRELMAACQRYLE--RAP 300 Query: 272 QGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFS 331 + VT EYVMLD VND HA L EL++D PCK NLIP+NPFP + + RS RI RF+ Sbjct: 301 RDFVTFEYVMLDDVNDSDAHARALVELVRDVPCKFNLIPFNPFPNSGFDRSPAERIRRFA 360 Query: 332 KVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR--KRMQGE 377 +L+ G T RKTRGDD++AACGQLAG V DR++RT+R K M+G Sbjct: 361 AILIDAGIVTTTRKTRGDDVNAACGQLAGQVQDRSRRTVRLVKPMEGR 408 >UniRef50_A4SYE2 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Proteobacteria RepID=RLMN_POLSQ Length = 402 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 186/383 (48%), Positives = 251/383 (65%), Gaps = 18/383 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 ++NLLD + QM + L EKPFRA Q+M+W++ + ++M+D+ K R L + E Sbjct: 5 RVNLLDFDADQMAAYVAGLNEKPFRAKQLMQWIHQRGVSDINDMSDLAKSFRATLLDKVE 64 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + V++++ ++DGT KW + VG VE+V+IPEDDR TLC+SSQ GCA+ C+FCST Sbjct: 65 VLSLPVIKDEHATDGTRKWLLDVGAGNAVESVFIPEDDRGTLCISSQAGCAVNCRFCSTG 124 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKV--------------TGQRPITNVVMMGMGEP 181 +QGF+RNL EIIGQ+W A ++ R I+NVVMMGMGEP Sbjct: 125 RQGFSRNLTSGEIIGQLWFAEHLLRNDPEAIRRIEKYPTPGWEHTGRVISNVVMMGMGEP 184 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEI 241 LLN +NVV A+ +MLDD +GLS+RRVT+STSGVVP +D+L VALA+SLHAPND + Sbjct: 185 LLNYDNVVSALRLMLDDRAYGLSRRRVTVSTSGVVPMIDRLAQDCPVALAVSLHAPNDAL 244 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 RD++VP+N+KY + L A RYL A + +T EY MLD VND A +L LL++ Sbjct: 245 RDQLVPLNQKYPLRELLDACERYLPF--APRDFLTFEYCMLDGVNDSDIQAKELVRLLRN 302 Query: 302 TPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 CKINLIP+NPFP + RSS R++ F+ +L+ G VRKTRGDDI AACGQLAGD Sbjct: 303 IKCKINLIPFNPFPESGLKRSSAQRVNAFAGILLDAGMVATVRKTRGDDIAAACGQLAGD 362 Query: 362 VIDRTKRTLRKRMQGEAIDIKAV 384 V+DRT+ R + I+I V Sbjct: 363 VVDRTRVRER-DIHSAEIEIAEV 384 >UniRef50_Q3BTW5 Ribosomal RNA large subunit methyltransferase N n=18 Tax=Gammaproteobacteria RepID=RLMN_XANC5 Length = 401 Score = 486 bits (1251), Expect = e-136, Method: Composition-based stats. Identities = 200/381 (52%), Positives = 259/381 (67%), Gaps = 16/381 (4%) Query: 12 TTKDGKINLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + K NLLDL+R+ + FF D LGE +RA QVMKW++H +FD+MTD+ K LR K Sbjct: 17 PPESRKQNLLDLDREGLERFFADTLGEARYRAHQVMKWIHHRYVTDFDQMTDLCKALRAK 76 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVG---DQRVETVYIPEDDRATLCVSSQVGCAL 127 L + AE+ P VV ++ S+DGT KW +A+G +ETVYIP+ R TLCVSSQVGC L Sbjct: 77 LHQHAEVLVPNVVFDKPSADGTHKWLLAMGADGKNAIETVYIPDKGRGTLCVSSQVGCGL 136 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C FCSTA QGFNRNL +EIIGQVW AA+ +G QR +TNVVMMGMGEPL+N +N Sbjct: 137 NCTFCSTATQGFNRNLTTAEIIGQVWVAARHLGNVPHQ-QRRLTNVVMMGMGEPLMNFDN 195 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVP 247 VV AM +M DD G+GL+ +RVTLSTSG+VP +D+L DV+LA+SLHA ND +R+ +VP Sbjct: 196 VVRAMSVMRDDLGYGLASKRVTLSTSGLVPMIDRLSTESDVSLAVSLHAANDTLRESLVP 255 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---- 303 +NKKY I + + RYL S + VT EY ++ +ND EHA QLA L++ Sbjct: 256 LNKKYPIAELMESCARYLRGSKK-RDSVTFEYTLMKGINDQPEHARQLARLMRQFDNAVQ 314 Query: 304 ----CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 K+NLIP+NPFPG Y RS + I F K+L+ T+VR+TRGDDIDAACGQL Sbjct: 315 SKDAGKVNLIPFNPFPGTRYERSGETEIRAFQKILLDAQVLTMVRRTRGDDIDAACGQLK 374 Query: 360 GDVIDRTKRT--LRKRMQGEA 378 G V+DRT+R R+ ++G+A Sbjct: 375 GQVMDRTRRQAEFRRTLEGQA 395 >UniRef50_B8CWT1 Radical SAM enzyme, Cfr family n=2 Tax=Firmicutes RepID=B8CWT1_HALOH Length = 349 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 147/349 (42%), Positives = 219/349 (62%), Gaps = 7/349 (2%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + K +L L+R+++ +F+ G FRA Q+ W+Y D F M ++ VLR +L+E Sbjct: 2 ETKEDLKSLSRKELLMWFEKRGYPSFRASQLFNWIYRNGVDEFSRMNNLPLVLREELEEK 61 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-RATLCVSSQVGCALECKFC 132 + + ++V + ++ DGT+K+ + D +E+V+IP + R ++C+SSQVGC+L CKFC Sbjct: 62 SYLTKLKIVNKSKAEDGTVKYLWELKDGETIESVFIPYEGSRNSVCISSQVGCSLGCKFC 121 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T G RNL EI+ QV + K + K G ++NVV MGMGEPL N+ +V+ A+ Sbjct: 122 ATGLTGLIRNLTPGEIVDQVLQIQKEISNDKY-GSPRVSNVVFMGMGEPLANMKSVLKAI 180 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 EIM D G + KR++T+STSG+VP + +L D + + LAISL+APN+ +RD+++PIN+K Sbjct: 181 EIMNDSKGLNIGKRKITVSTSGLVPQIKELADKKLQIVLAISLNAPNNALRDKLMPINRK 240 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + +E L AVR Y E +N RVT EYV+L ND EHA QL LL D +NLIP+ Sbjct: 241 FPLEKLLEAVRYYTEVTNR---RVTFEYVLLKGTNDSPEHAFQLVNLLSDIHGHVNLIPF 297 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 NP + R S ++RF +L++ G T VR+ RG I+AACGQL Sbjct: 298 NPVQETEFKRPSKETVNRFKDILINNGVETTVRQERGTRIEAACGQLRR 346 >UniRef50_Q8D1Y5 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Enterobacteriaceae RepID=RLMN_WIGBR Length = 382 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 198/356 (55%), Positives = 270/356 (75%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 + KIN+L R+++ +FF +GE+ FRA+Q+MKW+Y CD+ MTD +K L+ KLK Sbjct: 22 TNKKINILGKTREELYDFFIKIGEEKFRAEQIMKWIYKRYCDDVSLMTDFSKNLKNKLKN 81 Query: 74 VAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCS 133 + +I ++ E S DGTIKW + + DQ +ETVYIPE +RATLC+SSQ+GCAL CKFC+ Sbjct: 82 IIKIDHLDIESENISQDGTIKWVLKINDQNIETVYIPEINRATLCISSQIGCALNCKFCA 141 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 T+ QGFNRNL EII Q+W A KI+ + ITN+VMMGMGEPLLNL N+VPA++ Sbjct: 142 TSYQGFNRNLNSYEIISQIWYAMKIINDRNNFKLKKITNIVMMGMGEPLLNLKNLVPAIK 201 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYN 253 I+LD++GFGLSKRR+T+ST+G+ P + KLG +IDV LAISLHAPND IR++I+PINKKYN Sbjct: 202 IILDNYGFGLSKRRITISTAGISPVIKKLGKLIDVKLAISLHAPNDIIRNKIMPINKKYN 261 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I++ L + ++Y+ S AN+G+++IEY+ML+ +ND TEHA+QL LK+ PCKINLIPWNP Sbjct: 262 IKSILLSAKKYISTSKANKGKISIEYIMLNEINDKTEHAYQLINCLKNIPCKINLIPWNP 321 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 FP Y S+ ++I+ F K+L+ +G TT +RK RG DI AACGQL+G+VI+R + Sbjct: 322 FPYVKYKCSNFNKINNFYKILIKHGITTTIRKQRGIDIKAACGQLSGNVINRINKR 377 >UniRef50_Q6ALW1 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Desulfobulbaceae RepID=RLMN_DESPS Length = 362 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 152/357 (42%), Positives = 212/357 (59%), Gaps = 7/357 (1%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 E +TT KI+L +L++ Q+ EF + LG+ FR Q+M W+Y +F++MTD+ KV R Sbjct: 3 EEITTNREKIDLKNLSQDQLVEFAEKLGQPAFRGRQIMSWLYRPEVRDFEQMTDLAKVFR 62 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCAL 127 L E + + +R+ DG +K+ + D +ETV IPE DR TLC+SSQVGCA+ Sbjct: 63 KLLAENSFFSHFDDPIIERAKDGCVKFGFRLHDGHVIETVLIPEPDRNTLCISSQVGCAM 122 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT---GQRPITNVVMMGMGEPLLN 184 +C FC T GF RNL SEI+ QV A + G +TNVV MGMGEPL N Sbjct: 123 KCTFCMTGGMGFTRNLTPSEIVNQVCAARDFLANEPADKLIGPDRVTNVVYMGMGEPLNN 182 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDE 244 L NV+ ++ I+ + G L+ RR+T+ST G+V + +LG V LAISLHA +D+ RD Sbjct: 183 LENVLTSISILTEQKGLDLTGRRITVSTCGIVANMARLGQEAPVNLAISLHAVDDKTRDM 242 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P+N +Y ++ L A R Y + R+ EY+ML +ND A LA L++ PC Sbjct: 243 LMPVNNRYPLDELLEACRTYPMG---KRRRIMFEYIMLAGINDSDTEARTLARKLQEIPC 299 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 KINLIP+N PG PY RI F +L ++ +R +RG+DI AACGQLA D Sbjct: 300 KINLIPYNESPGLPYKSPGMKRILSFQNILREANYSVFIRNSRGEDIAAACGQLATD 356 >UniRef50_Q2W897 Ribosomal RNA large subunit methyltransferase N n=60 Tax=Alphaproteobacteria RepID=RLMN_MAGSA Length = 456 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 161/356 (45%), Positives = 213/356 (59%), Gaps = 7/356 (1%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 D K NL+ L+R Q+ +GEKPFRA Q+ WMY+ +F +MT I+K + G L E Sbjct: 84 DSKTNLIGLSRDQLIAEMASIGEKPFRAKQLWHWMYNRGETDFAKMTSISKSMHGALAER 143 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDD--RATLCVSSQVGCALECKF 131 +R P V +E S+D T KW + D ETVYIP+ D R +C+S+QVGC L C+F Sbjct: 144 YVVRRPGVTKELISADTTRKWLLKFDDGHEAETVYIPDADEERGAVCISTQVGCTLTCRF 203 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT--GQRPITNVVMMGMGEPLLNLNNVV 189 C T Q RNL +EI+GQ A G G R ++N+V+MGMGEPL N NV Sbjct: 204 CHTGTQLLVRNLSAAEIVGQFMVARDSYGEWPTPDDGGRQLSNIVVMGMGEPLYNFENVA 263 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPIN 249 A+EI +D G G+SKRR+TLSTSGVVP + + G+ + V LA+SLHA DEIRD I+PIN Sbjct: 264 TALEIAMDGEGIGISKRRITLSTSGVVPMMKECGERLGVNLAVSLHAVTDEIRDRIMPIN 323 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 KKY ++ + A R Y SNA R+T EY+ML +ND A L +L+K P K NLI Sbjct: 324 KKYPLKELMQACREYPGASNA--RRITFEYIMLKGINDSAADARALLKLVKGLPAKFNLI 381 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 P+NP+PG+ + FS +L G++ +R RG DI AACGQL + Sbjct: 382 PFNPWPGSEFDTPDIKTTKAFSDILQDAGYSAPIRMPRGRDILAACGQLRSESQRE 437 >UniRef50_Q5LY98 Ribosomal RNA large subunit methyltransferase N n=311 Tax=Bacteria RepID=RLMN_STRT1 Length = 389 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 126/367 (34%), Positives = 204/367 (55%), Gaps = 10/367 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L R ++ ++ + GEK FRA Q+ W+Y +F+EMT+I+K KL + Sbjct: 25 KPSIYGLTRDELIDWAVEHGEKKFRATQIWDWLYKKRVQSFEEMTNISKDFIAKLNDNFC 84 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + Q S DGT+K+ + D +ETV + + ++CV++QVGC + C FC++ Sbjct: 85 VNPLKQRIVQESKDGTVKYLFELPDGMLIETVLMRQHYGLSVCVTTQVGCNIGCTFCASG 144 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 R+L EI+ Q+ K +++VV+MG+GEP N +NV+ + + Sbjct: 145 LIKKQRDLTAGEIVAQIMLVQKYFDDR--GDGERVSHVVVMGIGEPFDNYDNVLRFLRTI 202 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 +D G + R +T+STSG+ P + + + + V LA+SLHAPN+++R I+ IN+ + + Sbjct: 203 NNDNGLAIGARHITVSTSGLAPKIKEFANEGVQVNLAVSLHAPNNDLRSSIMRINRSFPL 262 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP--CKINLIPWN 312 E A+ Y++ +N RVT EY+ML+ VND E+A +LA+L K INLIP+N Sbjct: 263 EKLFEAIEYYIQTTNR---RVTFEYIMLNEVNDHPENAQELADLTKKIRKLSYINLIPYN 319 Query: 313 PF-PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 P Y RS+ R+ F VL G +VR+ G DIDAACGQL + + R ++ Sbjct: 320 PVSEHDHYSRSTKERVAAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAV 379 Query: 372 KRMQGEA 378 G++ Sbjct: 380 AEASGKS 386 >UniRef50_Q2N9J2 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Alphaproteobacteria RepID=RLMN_ERYLH Length = 418 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 175/383 (45%), Positives = 228/383 (59%), Gaps = 26/383 (6%) Query: 8 PENVTTK-DGKINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNFDEMTD 62 P ++T + DG+++L+ L + +++E F + G + R+ QV W+YH +F+ MTD Sbjct: 19 PRDITPRADGRVDLMGLPKARIQELFAEAGLDAKQAKLRSKQVYHWLYHRGVTDFEAMTD 78 Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSS 121 I K +R L E + P VVE Q S+DGT KW + D E V+IP+ DR TLCVSS Sbjct: 79 IAKTMRPWLAERFIVGRPNVVEAQHSTDGTRKWLLQTDDGHDFEMVFIPDADRGTLCVSS 138 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG--------------- 166 QVGC L C+FC T RNL EI+GQV A +G Sbjct: 139 QVGCTLNCRFCHTGTMRLVRNLTPGEIVGQVMLARDALGEWPKGRMDGLDDVEDTGHYSA 198 Query: 167 -QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM 225 R +TN+VMMGMGEPL N +NV A+++++D G LSKRR+TLSTSGVVP +++ G+ Sbjct: 199 DGRLLTNIVMMGMGEPLYNFDNVRDALKLVMDGEGLALSKRRITLSTSGVVPMMERCGEE 258 Query: 226 IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHV 285 I V LA+SLHA +IRDEIVPINKKY IE L A Y SNA R+T EYVML Sbjct: 259 IGVNLAVSLHAVTKDIRDEIVPINKKYGIEELLQACADYPGASNA--RRITFEYVMLKDK 316 Query: 286 NDGTEHAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIV 343 ND EHA +L LLK + P K+NLIP+NP+PGA Y S+ RI FS ++ G + V Sbjct: 317 NDTDEHARELVRLLKQYNLPAKVNLIPFNPWPGAAYECSTPERIRAFSNIVFEGGISAPV 376 Query: 344 RKTRGDDIDAACGQLAGDVIDRT 366 R RG DIDAACGQL ++ Sbjct: 377 RTPRGRDIDAACGQLKTAAQKKS 399 >UniRef50_Q2LUM5 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Syntrophus aciditrophicus SB RepID=RLMN_SYNAS Length = 348 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 217/352 (61%), Gaps = 9/352 (2%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +IN+ D++ +++ F LG++ +RA Q+MKW+Y +FDEMT +++ +R +L E+A Sbjct: 4 NRINIRDMSLEEIESFISSLGKEKYRARQIMKWLYSQGAKSFDEMTTLSRAVRDQLNEMA 63 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I PE+ Q+SSDGT K + D +E+V IP T C+S+QVGC + C+FC T Sbjct: 64 CITLPEIARVQQSSDGTRKILFRLQDNSFIESVLIPGKHNWTACISTQVGCHMGCRFCFT 123 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 A+QGF RNL+ SEI GQ+ + I N+VMMGMGEPL N N + A+ I Sbjct: 124 ARQGFRRNLKPSEITGQLTMLQFYL-----PEGPEIKNIVMMGMGEPLANYRNTLKAIRI 178 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 + D+G G S R++TLSTSG+ P +++LG + + LAISL+AP D IR E++P+N+KY + Sbjct: 179 ITSDYGLGFSTRKITLSTSGITPMIEQLGRDLCINLAISLNAPTDSIRSELMPVNRKYPL 238 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + L A R Y + +T EY+++D VN HA L LLK CK+NLI +N F Sbjct: 239 DRLLQACRNYPMP---GRRMLTFEYILIDGVNSSPAHAEMLCRLLKGIRCKLNLIRFNEF 295 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 P P+ S + F ++L+ + +T I+R +RG DI AACGQL+G ++ Sbjct: 296 PDCPFKTPSEETVLAFQQILVKHHYTAIIRASRGRDILAACGQLSGKALEEK 347 >UniRef50_Q1D6I6 Ribosomal RNA large subunit methyltransferase N 2 n=6 Tax=Cystobacterineae RepID=RLMN2_MYXXD Length = 378 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 148/360 (41%), Positives = 211/360 (58%), Gaps = 6/360 (1%) Query: 5 LVTPENVTTKDGKINLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDI 63 + P +++ L+ + + F ++LGE+ FRA Q+ +W++ +FDEMTD+ Sbjct: 11 VTEPLPAPAPAKLVDVASLSLEALSRFVTEELGERAFRAPQIYRWLHQRGATSFDEMTDL 70 Query: 64 NKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQ 122 +KVLR KL+ AEI E RS+DGTIK+ D R +E+VY+P +DR TLCVS+Q Sbjct: 71 SKVLREKLRARAEIVPLVKDCELRSTDGTIKYRWKTRDGRYIESVYMPTEDRRTLCVSTQ 130 Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ-RPITNVVMMGMGEP 181 VGCA+ C FC T G RNL SEI+ QV + V + RP++N+V MGMGEP Sbjct: 131 VGCAMACGFCMTGTMGLKRNLTPSEIVAQVHAVNREVRKNEGHETLRPLSNLVFMGMGEP 190 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEI 241 L N N+ A+ I+ + G S R +T+ST G+VP +++ G DV LAISL+A DE Sbjct: 191 LHNFENLKTALSILQSEDGPNFSHRHITVSTVGLVPMIERFGKETDVKLAISLNASTDEQ 250 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 R + +P+N+K+NI L A R++ + R+T EYV++ ND E AH+L ELLK Sbjct: 251 RSKTMPVNRKWNIAALLDACRKFPLRQGR---RITFEYVLIKGFNDADEDAHRLIELLKG 307 Query: 302 TPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P K+NLIP+N PG + + R + F +L +R+ RG DI ACGQLA Sbjct: 308 IPVKVNLIPYNENPGLGFHTTGEERAEEFRAILADGHVAAYIRRNRGRDIAGACGQLANR 367 >UniRef50_C4Z523 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Firmicutes RepID=RLMN_EUBE2 Length = 350 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 136/349 (38%), Positives = 205/349 (58%), Gaps = 13/349 (3%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ LN ++ + LGEK FRA Q+ +WM+ D+FDE T+++ LR KLKE +E Sbjct: 3 DIKSLNYDELVTYMAGLGEKKFRAGQLYQWMHEKLADSFDECTNLSNALRQKLKETSEYV 62 Query: 79 APEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 E V Q S DGT K+ + D VE+V + ++C+SSQVGC + C+FC++ Sbjct: 63 CLEPVRVQHSKLDGTEKYLFRLSDGNYVESVLMKYHHGNSVCISSQVGCRMGCRFCASTL 122 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G R+LR SE++ Q++R KI G ++NVV+MG GEP+ N +N++ +E++ Sbjct: 123 NGKVRDLRPSEMLDQIYRIQKITG-------ERVSNVVVMGSGEPMDNYDNLIKFIELLN 175 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D+ G +S+R +T+S+ G+VP L +L D+ + + LAISLHAPNDE+R ++PI KY+IE Sbjct: 176 DERGLNISQRNITVSSCGIVPKLKELADLKLQITLAISLHAPNDELRKTMMPIANKYSIE 235 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + R Y+E + R++ EY ++ VND E A QL EL+K C INLIP NP Sbjct: 236 EIMDVCRYYIECTGR---RISFEYSLVKGVNDSMECAKQLIELVKGMNCHINLIPVNPIK 292 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 Y ++ + F L G +R+ G DID ACGQL ++ Sbjct: 293 ERDYKQTGKEEVYAFKNKLEKNGINVTIRREMGRDIDGACGQLRNKYME 341 >UniRef50_A3DCX9 Ribosomal RNA large subunit methyltransferase N n=11 Tax=Clostridia RepID=RLMN_CLOTH Length = 349 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 137/353 (38%), Positives = 211/353 (59%), Gaps = 14/353 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 D K +LL + +++ ++GE+ FRA Q+ +W + + D MT+++K LR KLKE Sbjct: 2 DAKADLLSMTIEELENLMAEMGEQKFRAKQIFQWT-NKGIKDIDAMTNLSKDLREKLKER 60 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 A I EV+++ S DGTIK+ + D + E+V + + C+SSQVGC + CKFC Sbjct: 61 AYINRLEVIKKFVSKIDGTIKYLFKLNDGNIIESVLMQYLHGYSACISSQVGCKMGCKFC 120 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL E++ Q+ + I NVV+MG+GEPL N NVV + Sbjct: 121 ASTGVGFVRNLTPGEMLDQILTIQN-------DTKNRIGNVVIMGIGEPLDNYENVVKFL 173 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 ++ G L R +++ST G+VP + +L + I V L+ISLHAPNDEIR++I+PINK+ Sbjct: 174 RLVNHKDGINLGARHISVSTCGLVPEILRLAEEKIPVTLSISLHAPNDEIREKIMPINKR 233 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y+I+ + A + Y E +N R+T EY M+D +ND E+A +LA+ ++ C +NLIP Sbjct: 234 YSIDKIIEACKIYTETTNR---RITFEYAMIDGLNDSKENALELAKRIRGMLCHVNLIPV 290 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 N + RSS +I F ++L +G T VR+ G DI+AACGQL ++++ Sbjct: 291 NTVSDTGFKRSSREKITAFKEILERFGVETTVRRELGSDINAACGQLRRNLVE 343 >UniRef50_Q3SNT2 Ribosomal RNA large subunit methyltransferase N n=21 Tax=cellular organisms RepID=RLMN_NITWN Length = 397 Score = 462 bits (1190), Expect = e-129, Method: Composition-based stats. Identities = 167/373 (44%), Positives = 219/373 (58%), Gaps = 17/373 (4%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKP----FRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 K +L+ L+R +M E +G R Q+ WMY F EMT ++K +R + Sbjct: 19 PAKPSLIGLSRAEMAERLAAIGIPREQRRMRVQQLWHWMYVRGARTFAEMTSVSKDMRAE 78 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-------RVETVYIPEDDRATLCVSSQV 123 L++ + PEVV EQ SSDGT KW + + VE VYIPE DR TLCVSSQV Sbjct: 79 LEKHVTLDRPEVVAEQISSDGTRKWLLRLPSGDDLEKPHEVECVYIPETDRGTLCVSSQV 138 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK----VTGQRPITNVVMMGMG 179 GC L C FC T Q RNL EI+GQ+ A + G R +TN+VMMGMG Sbjct: 139 GCTLNCSFCHTGTQRLVRNLTAGEIVGQIMVARDRLNDWADRETPHGNRLVTNIVMMGMG 198 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPND 239 EPL N + V + I+ D+ G G+SKRR+TLSTSGVVP + + G+ I V LAISLHA D Sbjct: 199 EPLYNFDAVRDGLLIVADNEGIGISKRRITLSTSGVVPNIVRAGEEIGVMLAISLHAVRD 258 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E+RDE+VP+N+KY I + A R Y SNA R+T EYVML VND + A +L +LL Sbjct: 259 ELRDELVPLNRKYPIAELMQACRDYPAASNA--KRITFEYVMLKGVNDSLDDARRLVKLL 316 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 KINLIP+NP+PG Y S +I++FS+ + + G+++ VR RG DI AACGQL Sbjct: 317 NGIHAKINLIPFNPWPGTRYECSDWDQIEKFSEYVFNAGYSSPVRTPRGRDILAACGQLK 376 Query: 360 GDVIDRTKRTLRK 372 + + R + Sbjct: 377 SETEKLSARERQA 389 >UniRef50_A1VAL8 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Desulfovibrionaceae RepID=RLMN_DESVV Length = 364 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 214/354 (60%), Gaps = 11/354 (3%) Query: 19 NLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++L+L +++ F +LGE FRA QV +W++ C +FDEMT+++K R +L E A I Sbjct: 3 DILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKAVI 62 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRA-----TLCVSSQVGCALECKF 131 PEV Q+S+DGT K+ + + D VETV IP R T C+S QVGCA+ C F Sbjct: 63 TWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCTF 122 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 CST GF RN+ + EI+GQV A +G ++ + N+V MGMGEPLLNLN V+ + Sbjct: 123 CSTGTMGFERNMTMGEILGQVLVARAHLGDSRPD-HPILRNLVFMGMGEPLLNLNEVMRS 181 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 + + D+FG S RR+T+ST G+ L +LG+ LA+SLHAPN EIR I+P Sbjct: 182 LRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEIRKRIMPKAAH 241 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 ++++ + A+ Y K+ + RVT EY++L VNDG EHA +L L+ T K+NLI + Sbjct: 242 WHLDDLITALESYPLKT---RERVTFEYLLLGGVNDGIEHARELVRLVSRTKGKLNLIVY 298 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 NP G PY + RI F + L S T I+RK++G DI AACGQL + R Sbjct: 299 NPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLKASELQR 352 >UniRef50_A5CX33 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=RLMN_VESOH Length = 356 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 173/354 (48%), Positives = 244/354 (68%), Gaps = 6/354 (1%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K NLL LN+ + +FF LGEK +R Q+M+W+Y +FD+M + +K LR +L ++A Sbjct: 2 NKQNLLSLNQDALNDFFVCLGEKHYRTKQIMQWIYKVHEFDFDKMFNFSKSLREELNKIA 61 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P+VV+++ + D IKW +A+ D +E VYIPE DR TLC+SSQVGCAL C FCST Sbjct: 62 CIEFPKVVKQKFALDKVIKWVLALSEDNYIEMVYIPEKDRGTLCISSQVGCALACTFCST 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 QGFN+NL +EII QV A K + + + I+N+V MGMGEPLLN V A ++ Sbjct: 122 GMQGFNKNLTTAEIIAQVLIANKYLNSKT----KRISNIVFMGMGEPLLNEQAVYNACDL 177 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 +LDD FGLS+R+VT+STSG+VP++ ++ V+LAISLHAPN+++RD++VP+N+KY+I Sbjct: 178 LLDDLAFGLSRRKVTISTSGIVPSILRMSKRTPVSLAISLHAPNNQLRDKLVPVNQKYSI 237 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L A + YL + + + EYVML VND TEHA++LA+LLK K+NLIP+N F Sbjct: 238 EELLKACKVYLN-AGTQERHILFEYVMLKDVNDSTEHANKLAKLLKAISAKVNLIPFNSF 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 Y S+ I++F +L G T++R+TRG+DID ACGQLAG V+++TK+ Sbjct: 297 ERTQYQSSNAQTIEKFQDILYQQGIRTMMRRTRGEDIDGACGQLAGKVLNKTKK 350 >UniRef50_B9KXX2 Radical SAM enzyme, Cfr family n=2 Tax=Thermomicrobia (class) RepID=B9KXX2_THERP Length = 379 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 142/360 (39%), Positives = 203/360 (56%), Gaps = 12/360 (3%) Query: 6 VTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINK 65 TP T + + L D ++ + + G +RA Q+ W Y ++ M+ + K Sbjct: 16 TTPRP-TGRVQRETLHDYTLGELEAWVEGRGLPRYRARQLFHWAYQQLVLEYESMSVLPK 74 Query: 66 VLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAV-GDQRVETVYIPEDDRATLCVSSQV 123 +R +L E I V ++ S D TIK D VETV + DR T+CVS Q+ Sbjct: 75 AVRSELSETLPISGLVPVRQRVSDDRETIKLLFRTRDDHFVETVVMFYPDRTTVCVSCQI 134 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCA+ C FC+T G RNL E++ QV AA++ + I+N+V+MGMGEP Sbjct: 135 GCAIGCSFCATGLSGLIRNLSAGEMVSQVVHAARLARERERR----ISNIVVMGMGEPFH 190 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIR 242 N + V+ + I+ D G G+ R +TLST+GVVP +D+L + V LA+SLHAPND +R Sbjct: 191 NYDAVMRFVAIVNDRQGLGIGARHITLSTAGVVPFIDRLAEEPYQVKLAVSLHAPNDALR 250 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 ++VPIN+++ I+ LAA RRY+ ++ RVT EYV+++ VND A +LA L+ Sbjct: 251 SQLVPINRRWPIDELLAACRRYVARTGR---RVTFEYVLIEDVNDDERTAAELARRLRGL 307 Query: 303 PCKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 C +NLIP+NP P AP + R RI+RF VL YG VR +RG +I AACGQL Sbjct: 308 LCHVNLIPYNPTPAAPLFRRPGPERIERFRAVLERYGIPATVRYSRGVEIAAACGQLRAQ 367 >UniRef50_Q3A2Z4 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Deltaproteobacteria RepID=RLMN_PELCD Length = 371 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 144/353 (40%), Positives = 216/353 (61%), Gaps = 14/353 (3%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 +D +I+L + +++ EF +G++ FRA QVM+WMYH D+FD M+D++KVLR +L Sbjct: 5 MDQDTRIDLKNFTLEELTEFLAGMGKERFRAGQVMRWMYHRLVDDFDAMSDLSKVLRAEL 64 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-RATLCVSSQVGCALEC 129 + A I + S DGT K+ + D +E+V IP DD RATLC+S+QVGCA+ C Sbjct: 65 HQRARISRLTPEATEDSRDGTRKYLFRLEDGETIESVRIPMDDNRATLCISTQVGCAMGC 124 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC T G RNL EI+ QV A P+ N+V+MGMGEPL NL+NVV Sbjct: 125 VFCHTGSFGLVRNLTPGEIVNQVCAAL---------ADGPVNNIVLMGMGEPLHNLDNVV 175 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPIN 249 A++I+ G S R+VTLST+G+VP + +LG + V LA+SL+A DE+R+ ++P+N Sbjct: 176 KALQILYMPQGLDYSPRKVTLSTAGLVPQMQELGKRVRVNLAVSLNATTDEVRNRLMPVN 235 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 ++Y ++ +AA R+Y + + R+T EY+++ VND + A +L +LL K+N+I Sbjct: 236 QRYPLQQLMAACRQYPLHA---KKRITFEYILIRDVNDSDQDARRLVKLLHGIKAKVNII 292 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 P+N + + + RI RF L+ +G I R ++G DI AACGQL G + Sbjct: 293 PFNEHSASEFRAPTEERISRFQGYLLDHGMVAIRRASKGQDISAACGQLKGKL 345 >UniRef50_D1CBZ4 Radical SAM enzyme, Cfr family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBZ4_THET1 Length = 371 Score = 459 bits (1181), Expect = e-128, Method: Composition-based stats. Identities = 138/363 (38%), Positives = 204/363 (56%), Gaps = 12/363 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M L +N K K +LLDL+ Q++RE+ + +RA QV + +Y + ++M Sbjct: 3 MHSALGIAKNKNHKPAK-SLLDLSLQELREWIRLRDYPEYRAVQVWQAIYRQLEVDPEKM 61 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDD-RATL 117 T + K LR L V + G T K + D +E+V + D RAT+ Sbjct: 62 TSLPKALREVLSAEFPFPNITPVRTFVADGGDTEKVLFQLEDGNAIESVLMEYMDGRATV 121 Query: 118 CVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMG 177 CVSSQ GCA+ C FC+T GF RNL EI+ Q+ +K + + +TN+V MG Sbjct: 122 CVSSQAGCAIGCTFCATGLGGFYRNLSAGEIVYQILYFSKKLR----DKGKRLTNIVYMG 177 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHA 236 MGEPL NL+ V ++E + + G S RR+T+ST+G+V +D+ + V LAISLHA Sbjct: 178 MGEPLANLDAVWRSVENLHEPTGMNFSARRITISTAGLVHQIDRFPPTDLQVNLAISLHA 237 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 PND++R I+PIN+++ I +A+ +RY+E+++ R+T EYV++ N EHA L+ Sbjct: 238 PNDDLRTSIMPINRRWPISELIASAKRYVERTHR---RITFEYVLIAGCNSSKEHARDLS 294 Query: 297 ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACG 356 LL+ C +NLIP N PG+P+ S ++ F +L+S G VR RG DI AACG Sbjct: 295 NLLRGLLCHVNLIPLNRVPGSPFEPPSTEEVNTFRDILLSAGIPCTVRLERGADILAACG 354 Query: 357 QLA 359 QL Sbjct: 355 QLR 357 >UniRef50_C5EIZ2 Radical SAM enzyme n=11 Tax=Clostridiales RepID=C5EIZ2_9FIRM Length = 354 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 125/359 (34%), Positives = 202/359 (56%), Gaps = 13/359 (3%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 ++T G+ ++ + +++ E LGEKPFRA Q+ W++ +FD M+ ++K LR Sbjct: 3 DLTDNKGRKDIKSMTLEEVTEEMAALGEKPFRAKQIYDWIHVKLAGSFDGMSSLSKELRQ 62 Query: 70 KLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCAL 127 KLK+ + + EE+ S DGT K+ + D + E+V++ ++C+SSQVGC + Sbjct: 63 KLKDNYSLTCLSITEERISQVDGTRKYLFCLEDGNIIESVWMQYHHGNSVCISSQVGCRM 122 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C+FC++ G RNLR SE++ Q++R G ++NVV+MG GEP N +N Sbjct: 123 GCRFCASTLDGLERNLRPSEMLDQIYRIQAHTGQ-------RVSNVVVMGSGEPFDNYDN 175 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIV 246 V+ + ++ + G +S+R +T+ST G+VP + + + + V LA+SLHAPNDE+R ++ Sbjct: 176 VIRFLRLISHEKGLNISQRNLTVSTCGIVPGILQFAQEGLAVTLALSLHAPNDEVRKTLM 235 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 PI +Y ++ L A Y EK+ R+T EY ++ VND + A L+ L+KD + Sbjct: 236 PIANRYKLKDVLEACHYYYEKTGR---RLTFEYSLVQGVNDNLDEARALSRLIKDQHGHV 292 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 NLIP NP Y +S I F +L G +R+ G DI ACGQL +++ Sbjct: 293 NLIPVNPIKERDYVQSGRKAIADFKDLLEKNGINVTIRREMGRDIGGACGQLRKSYMEK 351 >UniRef50_A9KM95 Ribosomal RNA large subunit methyltransferase N n=67 Tax=Bacteria RepID=RLMN_CLOPH Length = 356 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 127/354 (35%), Positives = 201/354 (56%), Gaps = 13/354 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI++ L ++++ K +GEK FRA Q+ +W++ +F+EMT+++K LR KL Sbjct: 6 EKIDIKALTLEELKASLKIIGEKEFRAKQIYEWLHVKLVRDFEEMTNLSKELRAKLASEY 65 Query: 76 EIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCS 133 E+ +E S DGT+K+ + D V E V + ++C+SSQVGC + C+FC+ Sbjct: 66 ELICVNDLERYESKMDGTVKYLFRLSDGNVVECVLMKYHHGNSVCISSQVGCRMGCRFCA 125 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 + G RNL+ SE++ +V++ ++ G ++N+V+MG GEP+ N +N V + Sbjct: 126 STLGGLTRNLKTSEMLDEVYQIQRLSG-------ERVSNIVIMGTGEPMDNYDNFVKFIR 178 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKY 252 ++ G +S+R +T+ST G+VP + L + + LA+SLHAPNDE R +I+P+ Y Sbjct: 179 MISSSDGLNISQRNITVSTCGIVPKMRALAEEGFAITLALSLHAPNDEERAKIMPVANSY 238 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 ++ L A Y EK+ RV+ EY ++D VND A +L+ LLK C +NLIP N Sbjct: 239 QLQDVLNACDYYYEKTGR---RVSYEYSLVDGVNDTAACAKELSRLLKGKNCHVNLIPVN 295 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 P Y RS+ + I F +L +R+ G DI+AACGQL D+T Sbjct: 296 PIKERDYKRSTGNNIQNFKNILEKNRINVTIRREMGSDINAACGQLRKSYTDKT 349 >UniRef50_D0LIH5 Radical SAM enzyme, Cfr family n=2 Tax=Nannocystineae RepID=D0LIH5_HALO1 Length = 378 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 152/355 (42%), Positives = 216/355 (60%), Gaps = 7/355 (1%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 + +I+L L+ + +LG+ +R +Q+ +W++ ++M ++ + LR L Sbjct: 12 APAETRIDLRTLDLAETVALALELGQPRYRGEQIWRWVHGAGVTRLEDMANLPRTLRELL 71 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 E + V Q S DGT K + D R +ETV IP+ D+ T C+SSQVGCAL+C Sbjct: 72 AERTTLGTLRVDAAQTSRDGTRKLRLRTRDGRAIETVLIPDGDKLTQCISSQVGCALDCD 131 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+TA+ G R+L EI+ QV+R ++ +V +R ITN+V MGMGEPL N NVV Sbjct: 132 FCATAKLGLTRHLDPGEIVDQVYRGRALLA--EVEPERRITNLVYMGMGEPLHNYANVVK 189 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 ++ ++ + G LS+RR+T+ST G VP ++KLG + + LAISL+A +DEIRD I+P+N Sbjct: 190 SLRLLTSELGANLSQRRITVSTVGQVPGIEKLGREDVRPNLAISLNASSDEIRDRIMPVN 249 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 +K+NI L AVR Y + + RVT EYV+L VND A +L+ LL+ PCK+N+I Sbjct: 250 RKWNIARLLQAVRDYPLE---RRRRVTFEYVLLAGVNDSMADAARLSRLLRGIPCKLNII 306 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 PWNP PGAPY R S ++ F G T +R RGDDIDAACGQLA V Sbjct: 307 PWNPHPGAPYQRPSAHAVEAFQNEAKRLGLPTYLRTPRGDDIDAACGQLAARVEQ 361 >UniRef50_D1Y601 23S rRNA m2A2503 methyltransferase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y601_9BACT Length = 365 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 146/366 (39%), Positives = 209/366 (57%), Gaps = 13/366 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDE 59 M + N K K N ++ F ++ L + ADQ+ +W+Y +F Sbjct: 9 MENDELNVTNAPEKATKRNAFEMTLADWERFVQEELDMPRYTADQLCQWIYKKKVFDFRA 68 Query: 60 MTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLC 118 MT+++K LR +L E+ EIR P++ + Q ++DGT K+ + D VE+V + + T C Sbjct: 69 MTNLSKALRERLPELLEIRLPKLAKRQTAADGTRKYLWRLDDGEYVESVLMDHGNHYTAC 128 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 +SSQVGC L C+FC+T QQGF RNL EI+ VG I NVV MGM Sbjct: 129 ISSQVGCPLRCEFCATGQQGFKRNLSAGEIVSHFAAMESDVG-------HDINNVVFMGM 181 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAP 237 GEPLLN NVV A+ + L+ GLS R VT+STSG+ + +L D +D+ L +SLHAP Sbjct: 182 GEPLLNYENVVKAVRMFLEPKMRGLSVRHVTISTSGIPEGIRRLADEGLDIYLCLSLHAP 241 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 N+E+R I+P+N+++ + +A+ + +K+ R+TIEYVML +VND + A++LA Sbjct: 242 NNELRSRIMPVNERFPLGAVFSALEYWQKKTGV---RLTIEYVMLKNVNDTPDCAYELAT 298 Query: 298 LLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQ 357 L + +NLIP+NP G + R S SRI F K+L VRK G DIDAACGQ Sbjct: 299 LFSNLQVYVNLIPYNPVAGTQFARPSASRIAPFMKILKGLNVECEVRKEHGADIDAACGQ 358 Query: 358 LAGDVI 363 L G + Sbjct: 359 LRGKTV 364 >UniRef50_B8DRU2 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Desulfovibrionales RepID=RLMN_DESVM Length = 367 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 148/355 (41%), Positives = 214/355 (60%), Gaps = 11/355 (3%) Query: 18 INLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 I++L+L ++ + LGE FRA QV +W++ +FD MT+++K R +L E A Sbjct: 2 IDILNLTYDELEAWMTGTLGEPRFRARQVWQWLWQKNARSFDAMTNVSKATRARLAEAAR 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDR-----ATLCVSSQVGCALECK 130 I PEV + SSDGT+K+ +A+ D VETV IP + R T C+S QVGCA+ C Sbjct: 62 ITWPEVRTVKTSSDGTVKFLLALADGALVETVLIPSESREGKVRMTQCLSCQVGCAMGCT 121 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FCST GF RN+ ++EI+GQV A + +G + + N+V MGMGEPLLNLN V+ Sbjct: 122 FCSTGSMGFERNMTMAEILGQVLVAREHLGDDRPD-HPIVRNLVFMGMGEPLLNLNEVMR 180 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINK 250 ++ + D+FG S RR+T+ST G+ L +LG+ LA+SLHAPN E+R I+P Sbjct: 181 SLRTLNDEFGLCFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEVRARIMPRAA 240 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 ++ ++ +AA+ Y K+ + R+T EY++L VND +HA +L L+ T K+NLI Sbjct: 241 RWTLDDLMAALESYPLKT---RERITFEYLLLGGVNDSIDHARELVRLVSRTKAKLNLIV 297 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 +NP G PY S +RI F + L S T I+RK++G DI AACGQL + Sbjct: 298 YNPAEGLPYEAPSQARILAFEQYLWSKNVTAIIRKSKGQDIKAACGQLKASELAE 352 >UniRef50_B6BF31 Radical SAM enzyme, Cfr family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF31_9RHOB Length = 413 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 178/378 (47%), Positives = 240/378 (63%), Gaps = 14/378 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEK----PFRADQVMKWMYHYCCDN 56 +++ ++T + GKINL+ L R +MRE + G R Q+ +W+Y + + Sbjct: 7 ITQDVLTLPRKDPEGGKINLVGLTRDRMREVLMEHGTPEKQAKMRVGQIWQWIYQWGKRD 66 Query: 57 FDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV-GDQRVETVYIPEDDRA 115 F EMT++ K R +L E EIR PEVV +Q S+DGT K+ + + G VE VYIPE+DR Sbjct: 67 FAEMTNLAKAYRAQLAETFEIRIPEVVSKQVSTDGTRKYLVRIAGGHEVEVVYIPEEDRG 126 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ-----RPI 170 TLC+SSQVGC L C FC T Q RNL +EI+GQV A + V G R + Sbjct: 127 TLCISSQVGCTLTCSFCHTGTQKLVRNLTPAEIVGQVMMARDDLEEWPVPGAPKEETRLL 186 Query: 171 TNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVAL 230 +N+V+MGMGEPL N +NV AM+I +D G LS+RR+TLSTSGVVP + + I L Sbjct: 187 SNIVLMGMGEPLYNFDNVRDAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAQEIGCLL 246 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 AIS HA +E RD +VPINK++NI+ L A+ Y + SN+ R+T EYVMLD VND E Sbjct: 247 AISFHATTNETRDVLVPINKRWNIDELLQALADYPKASNS--ERITFEYVMLDGVNDTDE 304 Query: 291 HAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRG 348 AH+L + +K + P KINLIP+N +PG+PY RSSN+RI F+ ++ G+ + +RKTRG Sbjct: 305 DAHRLIDHIKRYNIPAKINLIPFNEWPGSPYKRSSNNRIRAFANIIYQAGYASPIRKTRG 364 Query: 349 DDIDAACGQLAGDVIDRT 366 DDI AACG +V DRT Sbjct: 365 DDIMAACGLRPAEVSDRT 382 >UniRef50_B5YF42 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Dictyoglomus RepID=RLMN_DICT6 Length = 348 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 143/348 (41%), Positives = 203/348 (58%), Gaps = 10/348 (2%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+L + ++R+ + GE +RADQ+ W+Y N MT++ K LR K+ E Sbjct: 3 NILSFDIDEIRDILRGWGEPSYRADQIFDWVYKKLILNPSSMTNLPKGLRQKIAEYFSFD 62 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 P+VV+ + T K+ + + D +ETV I +R T+CVS QVGCA+ CKFC+T Sbjct: 63 IPKVVKITGEGN-TKKYLLELEDGENIETVLISHKNRNTVCVSVQVGCAIGCKFCATGLV 121 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G RNL EI+GQ+ K + I+NVV MGMGEPLLN +NVV ++ I+ Sbjct: 122 GLRRNLNTHEIVGQIILIQKEL----FEKGDRISNVVYMGMGEPLLNYDNVVKSIRIINR 177 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 ++G + + +TLST G+VP + +LG+ + V LAISLHAPN+E+R +I+PINK+Y IE Sbjct: 178 EWGLNIGSKHITLSTIGIVPKIYQLGEEDLKVRLAISLHAPNNELRSKIIPINKEYPIEK 237 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L + Y EK+ RVT EYV++ + ND EHA +LA LLK+ P +NLIPWN P Sbjct: 238 LLESAFYYAEKTGR---RVTFEYVLIKNFNDREEHAIELAGLLKNKPVHVNLIPWNKVPE 294 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 P+ S I +F K+L G +R + G I A CGQL + Sbjct: 295 YPWETSDLKDIFKFKKILSDAGINVTLRISYGSRIKAGCGQLRALYLK 342 >UniRef50_C0GIQ5 Radical SAM enzyme, Cfr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIQ5_9FIRM Length = 347 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 140/351 (39%), Positives = 203/351 (57%), Gaps = 9/351 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K+NLL+L+ +++EFF+ LG+ FRA QVM W+Y F+EMT++ K LR +L + A Sbjct: 3 KVNLLELSTSELQEFFQSLGQPAFRAKQVMDWLYQQGAQTFNEMTNLPKGLREQLAQKAV 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 VV EQ S DGT K+ A+ D VETV +P D + C+S+QVGC + C FC++ Sbjct: 63 PGFLSVVTEQVSEDGTEKYLFALPDGQTVETVVLPYDIGFSACISTQVGCKMGCLFCASG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 GF RNL +EI+ QV + + + + ++V+MG GEPL N + +E + Sbjct: 123 LPGFVRNLTAAEIMAQVLQVKNALRKR----GKELKSLVLMGSGEPLDNFRETIAFLEAV 178 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNI 254 D +S R VTLSTSG+VP +++L + + LA+SLHA N+ +RD+I+P+NK Y + Sbjct: 179 RDPQKLAMSLRHVTLSTSGLVPKIEELAKLGWPLNLAVSLHASNNRVRDKIMPVNKTYPL 238 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L+A Y + RVT EY+++D +ND TEHA +LA LLK C +NLIP N Sbjct: 239 EPLLSACDTYSRATGR---RVTYEYILIDRLNDKTEHAKELASLLKGRLCHVNLIPLNAV 295 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 S + + +F L G VR+ G DI AACGQL + + Sbjct: 296 DELGLKPSPQNTVKQFRDTLRQKGVNVTVRRKLGADIAAACGQLRNEYLGE 346 >UniRef50_B0UQR1 Ribosomal RNA large subunit methyltransferase N n=102 Tax=Bacteria RepID=RLMN_METS4 Length = 431 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 174/403 (43%), Positives = 232/403 (57%), Gaps = 29/403 (7%) Query: 6 VTPENVTTKDGKINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNFDEMT 61 V PE + G+ +L+ L R +RE +G E+ R Q+ W+ +F+ MT Sbjct: 27 VRPEAMVAT-GRPSLVGLTRGALRERLAAIGVPEREQRMRTGQLWHWINVRGAASFEAMT 85 Query: 62 DINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVG---------DQRVETVYIPED 112 ++ K L+ +L+E + PEVV EQ S DGT KW + + +E VYIP + Sbjct: 86 NVGKGLKAQLEEAYTLDRPEVVSEQVSRDGTRKWLLRMPPTGRHDHNRGAEIECVYIPAN 145 Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK--------- 163 DR TLCVSSQVGC L C FC T Q RNL EI Q+ A +G Sbjct: 146 DRGTLCVSSQVGCTLTCSFCHTGTQRLVRNLSAQEITAQLVVARDRLGDWPGQVPPKGTF 205 Query: 164 --VTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDK 221 V G R ++N+V MGMGEPL N++NVV A+ +M D+ G GLS+RR+T+STSGVVP ++ Sbjct: 206 VPVDGSRFVSNIVFMGMGEPLYNVDNVVDAVGVMSDNEGLGLSRRRITVSTSGVVPQFER 265 Query: 222 LGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVM 281 LG + LAISLHA D++RDE+VP+N+KY I T L A R Y SNA R+T EYVM Sbjct: 266 LGIDANAMLAISLHAVRDDLRDELVPLNRKYPIRTLLEACRNYPGVSNA--RRITFEYVM 323 Query: 282 LDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTT 341 L VND A +L LLK P KINLIP+NP+PG+ Y S RI+RFS+++ + G+ + Sbjct: 324 LKGVNDSDSEARELVRLLKGIPAKINLIPFNPWPGSRYECSDWERIERFSEIVFNAGYAS 383 Query: 342 IVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV 384 VR RG DI AACGQL + R + M + I + V Sbjct: 384 PVRTPRGRDILAACGQLKSET--EKLRARARLMLEDGIGAEGV 424 >UniRef50_B5EJF0 Radical SAM enzyme, Cfr family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJF0_ACIF5 Length = 363 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 165/356 (46%), Positives = 228/356 (64%), Gaps = 11/356 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 + +LL L RQ + + + GE PFRA+Q+++W++ +F MTDI+K LR +L Sbjct: 12 ERPHLLGLGRQSLAKLLRTWGESPFRANQILQWLHTRQVTDFAAMTDISKTLRARLAAET 71 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I PE++ +Q ++D T KW + + D +ETV+IP +DR TLC+SSQVGC+L C FC+T Sbjct: 72 RIDMPEIIADQTAADCTRKWLLRLPDGNAIETVFIPGEDRGTLCISSQVGCSLACSFCAT 131 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 QG +RNL EII QV A +G ITN+V MGMGEP+LNL V+PA+++ Sbjct: 132 GAQGLSRNLETHEIIAQVRVARDFLGLDA------ITNIVFMGMGEPMLNLREVLPALDL 185 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 + DD+ +G RR+T+ST+GVVP +D+LG V LAISLHA DEIRD +VP+N+ Y + Sbjct: 186 LRDDYAYGFGARRITVSTAGVVPGMDRLGAESPVNLAISLHASRDEIRDILVPVNRHYPL 245 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 LAA + R+T EYVML+ VND HA +L LL+D P +NLIP+NPF Sbjct: 246 AELLAAC---RRYPLPPRRRITFEYVMLEGVNDADSHARELLRLLRDIPAMVNLIPFNPF 302 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTL 370 PG+ Y RS RID F +++ T+ R+ RGDDI AACGQLAG V +R++ Sbjct: 303 PGSDYKRSPQVRIDAFRDIILRGNVMTVTRRPRGDDIAAACGQLAGQV-RAGRRSI 357 >UniRef50_Q7UHU7 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Rhodopirellula baltica RepID=RLMN_RHOBA Length = 371 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 145/359 (40%), Positives = 220/359 (61%), Gaps = 10/359 (2%) Query: 5 LVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDIN 64 + T ++ +T K +LL+ + Q++++ ++ G+KPFRA Q+ +W++ +F+EMTD+ Sbjct: 13 VTTTDSESTGPRKNHLLNWSLDQLKDWLQEQGQKPFRAKQIRRWLFSGRATSFEEMTDLP 72 Query: 65 KVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQV 123 LR +L+E I +S DGT K + + D VE V + + R ++CVSSQV Sbjct: 73 AKLRAQLEEHFAIFNATEAVVSKSKDGTEKILVRLADGGEVECVLLRDGPRRSICVSSQV 132 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCA+ C FC++ G +RNL EI+ Q+ R + ++ ++++VMMGMGEPL Sbjct: 133 GCAMGCVFCASGLDGVDRNLTGGEILEQMLRLQQ-----RLPADERLSHIVMMGMGEPLA 187 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIR 242 NL V+ A+++ + G G+S RR+T+ST G+ PA+DKL I LA+SLHAPNDE+R Sbjct: 188 NLPGVLSALDVARSEDGLGISPRRITISTVGLPPAIDKLAAAGIPYNLAVSLHAPNDELR 247 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 E+VP+N+K IE L A RY S R+T EYV+L +NDG EHA QL+++L+ Sbjct: 248 SELVPVNRKIGIEPVLQAADRYFHASGR---RLTFEYVLLGGINDGDEHARQLSQILRGR 304 Query: 303 PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 +N+IP+NP G PY S + I RF +L S G R+ +GD+I+AACGQL + Sbjct: 305 SVMMNVIPYNPVAGLPYRTPSGAAIARFRAILESAGVNVNFRQRKGDEINAACGQLRRN 363 >UniRef50_A4ECT0 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4ECT0_9ACTN Length = 350 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 192/354 (54%), Gaps = 12/354 (3%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + + ++ DL++ +RE +LG+ FRA Q+++W++ +FD+MT++ K R + Sbjct: 1 MNPRTKSQDIRDLSQNDIRELVAELGQPAFRAKQLIEWVFEKNVCSFDDMTNLPKAFREQ 60 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALEC 129 LKE P + +Q S DG+ K+ + D VETV +P ++ ++CVS+Q GC + C Sbjct: 61 LKEAFAFDTPTELTKQVSKDGSRKYLLEYHDGVSVETVGMPRRNKLSVCVSTQAGCGMGC 120 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T G R+L EI+ QV + G T+VV MG GEP N + V+ Sbjct: 121 AFCATGLNGLKRSLTAQEIVDQVLHVSNDFG-------ERATSVVFMGQGEPFANYDEVL 173 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPI 248 A+ I+ D G G+ R +T+STSGV+P + K D+ LA+SLH+ R++++P Sbjct: 174 KALRILNDPDGIGIGARHLTVSTSGVIPGIRKFADIPEQFTLAVSLHSAIQSTRNKLMPG 233 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 KKY + A++ Y EK+ R T EY M++ VND L + + T C +NL Sbjct: 234 VKKYTLFRLHEALQLYTEKTGR---RPTYEYAMIEGVNDTNPEMQALCDFCEGTLCHVNL 290 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 I N G+P S +++ + L S G T +R +RG+DIDAACGQL Sbjct: 291 IQLNDIEGSPLKPSPIHKVEDLQRRLESRGIETTIRNSRGNDIDAACGQLKQRF 344 >UniRef50_Q54J76 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54J76_DICDI Length = 407 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 144/365 (39%), Positives = 210/365 (57%), Gaps = 5/365 (1%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 T KINL+ + + ++ + LG + ++Q+ +MY+ + + ++K R Sbjct: 41 EKTDIIKKINLIGIQKDELEDKVLKLGYPKYLSEQIWAFMYNKGIVDINSFERVSKEKRE 100 Query: 70 KLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALEC 129 ++K E+ E+ + Q S DGT K I+ VE+V+IPE R TLCVSSQVGC C Sbjct: 101 EIKSKYEVNIGEITKHQLSVDGTRKLLISFDGAEVESVFIPEGKRGTLCVSSQVGCTFAC 160 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIV-GAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 FC T Q F RNL SEI+ QV ++ + +R +TN+V MG GEP N NV Sbjct: 161 TFCHTGTQKFIRNLTASEIVSQVIATRHVLNDFTDSSIKRTLTNIVFMGQGEPFYNYRNV 220 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVP 247 A++I+ D G + K ++T+STSGVVP +D+LG D + LAISLH+ ND+ R EIVP Sbjct: 221 SKAIKIITDPNGLAIGKSKITVSTSGVVPLIDRLGSDFPGIGLAISLHSANDKTRSEIVP 280 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 N+++ I + A ++ S + R+TIEYVML VND + A+ L +L K P +N Sbjct: 281 ANRQWPISELVEACIKF---SKNCKERITIEYVMLKGVNDSEQDAYDLVKLSKSFPSFVN 337 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 LIP+NP+PG+ Y SS I +FSK+L G +R+ RG DI AACGQL + I Sbjct: 338 LIPFNPWPGSQYKSSSKETISQFSKILDDKGIKVTIRQPRGRDILAACGQLNTESIKEIN 397 Query: 368 RTLRK 372 + ++ Sbjct: 398 KPIQP 402 >UniRef50_A6TRW3 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Firmicutes RepID=RLMN_ALKMQ Length = 352 Score = 453 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 133/361 (36%), Positives = 209/361 (57%), Gaps = 14/361 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K++LL L ++M F ++GEK FRA Q +W+ + ++EMT+++K L +L E Sbjct: 3 KVDLLSLTMEEMESLFLEIGEKKFRAKQAFQWV-NKGIKQYEEMTNLSKKLIKQLSEETR 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 I + E+ S DGT+K+ + D + E V + T C+S+QVGCA+ C+FC++ Sbjct: 62 ITHNRIEEKFVSKIDGTVKYLFLLDDGHIIEGVLMKYKHGFTACISTQVGCAMGCQFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNLR E+I Q+ + I+N+V+MG GEPL N + + ++I Sbjct: 122 TTGGLIRNLRAGEMIDQILLMQQ-------DQGERISNIVLMGSGEPLHNYDETIRFLKI 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + D G + R +TLST G+VP + KLG + I + LAISLHAPND++R + +PI +KY Sbjct: 175 VNDPEGLNIGNRHITLSTCGLVPEIKKLGALQIPINLAISLHAPNDQLRKQTMPIAQKYT 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I+ + + YLE +N R+T EY +++ VNDG + AH+L++LLK C +NLIP NP Sbjct: 235 IDQLIQSCYDYLENNNR---RITFEYALIEDVNDGEKEAHELSKLLKGLLCHVNLIPINP 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 Y +S +S++ +F ++L S G +R+ G DI ACGQL +D ++ Sbjct: 292 IEERTYQKSKDSQVKKFQQILKSNGIEATIRREMGTDIQGACGQLRRKYVDDQEKKEISE 351 Query: 374 M 374 + Sbjct: 352 V 352 >UniRef50_D1PM67 Radical SAM enzyme, Cfr family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM67_9FIRM Length = 345 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 126/348 (36%), Positives = 198/348 (56%), Gaps = 12/348 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI L D ++ + LG+ FRA Q+ KW++ F +MTD K L L+E Sbjct: 2 RKICLSDYTLAELTAYIVGLGQPKFRAKQIFKWLHQKLVTEFTQMTDQPKTLLAVLEEQC 61 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P + +Q+S DGT+K+ + + D +ETV + T+CVS+QVGCA+ C+FC++ Sbjct: 62 TIAVPTIRRKQQSKDGTVKYLLQLADGNCIETVLMRYKYGNTVCVSTQVGCAMGCRFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 Q G R+L EI +++ A K G ++++V+MG+GEPL N +NV+ +EI Sbjct: 122 TQAGRVRDLTAGEIAAEIYTAQKDSG-------ERVSHIVLMGIGEPLHNFDNVMDFLEI 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 + G + R ++LST G+VP +D+L + + L++SLHAP++ R ++P+N Y Sbjct: 175 ISCPEGVNIGMRNISLSTCGLVPKIDELAKRHLQLTLSVSLHAPDNVTRSGMMPVNDAYP 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 +E + A RRY +++ R++ EY M+ VND +E A +LA L+ +NLIP NP Sbjct: 235 LEELIPACRRYQKETGR---RISFEYSMVRGVNDSSEMAQKLARLIHGMGAHVNLIPINP 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 G+PY + + + RF + L G VR+ G DI AACGQL + Sbjct: 292 VDGSPYSATDEANVRRFQQELEHLGVNATVRRRLGTDISAACGQLRRE 339 >UniRef50_Q2RK16 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RLMN_MOOTA Length = 354 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 134/350 (38%), Positives = 197/350 (56%), Gaps = 11/350 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +I+L L Q++ E LGE P+R Q+ +W++ + M+D+ + R +L VA Sbjct: 3 TRIDLRGLLPQELEELAVRLGEAPYRGRQIFRWLHARRAKGIEVMSDLPRAFRERLALVA 62 Query: 76 EIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDD---RATLCVSSQVGCALECK 130 E+ V+ ++DG T K + +GD +E V + D R T C+SSQVGCA+ C Sbjct: 63 ELPPVRVLNRLVAADGLTRKLLLGLGDGNSIECVLMIYKDGRRRNTACLSSQVGCAMGCS 122 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+T Q G RNL SEII Q + + G I+N+V MGMGEPL N V+ Sbjct: 123 FCATGQGGLQRNLTASEIILQALALGAELA--EGEGGNRISNIVFMGMGEPLNNYEAVMK 180 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 + I D G+G+S RR+TLST G+VP +++L + + LA+SLHA +E+RD+++PIN Sbjct: 181 GVRIFEDPSGWGISHRRITLSTCGIVPGIERLAREKPPLELAVSLHAVTNELRDKLMPIN 240 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 ++Y +E + A RRY E + RVT EY ++ VND E A L+ LL+D +N+I Sbjct: 241 RRYPLEELIPACRRYAEITGR---RVTFEYALIAGVNDRREDARGLSRLLRDMLAFVNII 297 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 P NP G+ + + F +L G +R +RG DI AACGQL Sbjct: 298 PLNPVAGSGFKGVPPAAARAFVALLQEAGLEAAIRDSRGQDIAAACGQLR 347 >UniRef50_B0TGT1 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Heliobacteriaceae RepID=RLMN_HELMI Length = 385 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 199/371 (53%), Gaps = 12/371 (3%) Query: 4 QLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDI 63 Q + PE + +L L +++ G+ FR Q+ KW+ + EMTD+ Sbjct: 19 QRIEPEGEEQSEQPTDLRGLFPEEIAALLTPWGQPTFRGKQIFKWLQNRAVREVAEMTDL 78 Query: 64 NKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPED-----DRATL 117 + LR +L E ++ + + DGT K+ + D +E+V +P DR T+ Sbjct: 79 PQALRVRLGEAGWLKPLAPERHRVARDGTEKYLWRLADGELIESVLMPYRRAQTRDRVTV 138 Query: 118 CVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMG 177 C+S+Q GC L C+FC+T +QGF RNL +EI+GQV K +TN+V MG Sbjct: 139 CLSTQAGCPLSCRFCATGRQGFRRNLTAAEIVGQVLDITHE--KRKDDPDFKVTNLVFMG 196 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHA 236 MGEP LN +NV A+ + G + +RR+T+ST+G+VP +D+ D +V LA+SLHA Sbjct: 197 MGEPFLNYDNVRRAIGLFTHPEGQAIGQRRITVSTAGIVPGIDRFADEDWEVNLALSLHA 256 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 +D+ R E +P+N ++ + L A RRY EK+ R+++EY ++ VND E A +LA Sbjct: 257 ADDKQRSEWMPVNDRFPLAQVLEACRRYWEKTRR---RLSVEYALMAGVNDRLEDARRLA 313 Query: 297 ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACG 356 L K P +NLIP N G R +RF L +G ++R+ RG DI+AACG Sbjct: 314 SLFKGWPIHLNLIPVNAVAGIGVRRPEREPTERFLAELRRWGVDAVIREERGQDIEAACG 373 Query: 357 QLAGDVIDRTK 367 QL G + Sbjct: 374 QLRGAAKGEEE 384 >UniRef50_A9WFY6 Ribosomal RNA large subunit methyltransferase N n=4 Tax=Chloroflexi (class) RepID=RLMN_CHLAA Length = 376 Score = 449 bits (1156), Expect = e-125, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 195/352 (55%), Gaps = 14/352 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L D N ++ E + GE FRA Q+ + +Y D+MTD+ LR +L E+ Sbjct: 10 LYDYNLSELTELLQSWGEPAFRARQLYRHLYVNLARQVDQMTDLPLALRSRLAEI-PFST 68 Query: 80 PEVVEEQRSSDG-TIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 + Q +G T K + D V ETV + DR+T+CVS+Q GC + C FC+T Q Sbjct: 69 LRCEQVQIGDNGMTRKALFRLPDGAVVETVLMVYPDRSTVCVSTQAGCGMGCVFCATGQL 128 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR-PITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL EI+ Q A++ + A + G ++N+V MGMGEP N + A+E + Sbjct: 129 GLLRNLSSGEIVAQAIWASQELRAMGMAGPTGRVSNLVFMGMGEPFANYDRWWQAVERLH 188 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D GF L R +T+ST G+V +++L + + + LAISLHAP+D +R E++P+N++Y I Sbjct: 189 DPQGFNLGARSMTVSTVGLVKGIERLANERLPINLAISLHAPDDALRSELMPVNRRYPIA 248 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD------TPCKINLI 309 +AA R Y+ K+ RV+ EYV+L ND A LA LL+ +NLI Sbjct: 249 DLMAATRNYIAKTRR---RVSFEYVLLQGKNDHPHQAIALARLLRHSAPRGPLLFHVNLI 305 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 PWNP PG P GRS R+ F ++L YG VR RG +I AACGQLAG Sbjct: 306 PWNPVPGTPLGRSEWERVTTFQQILTDYGIPCTVRVERGVEIAAACGQLAGR 357 >UniRef50_C1TNK6 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNK6_9BACT Length = 341 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 145/343 (42%), Positives = 207/343 (60%), Gaps = 13/343 (3%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 L+ N + R F + GE +RADQ+ +W+Y + MT+++K LR KL+ ++ P Sbjct: 8 LEFNYDEWRNFVDEAGEPSYRADQLCQWIYGKKVFDIHRMTNLSKDLRSKLEGHLYVQPP 67 Query: 81 EVVEEQRSSDGTIKWAIA-VGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 V+ Q+SSDGT+K+ + Q VE+V + + T C+S+QVGC L C FC+T +QGF Sbjct: 68 FAVDVQKSSDGTVKFLWRFLDGQEVESVLMDHGNHHTACLSTQVGCPLRCDFCATGRQGF 127 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL V EI+G +G I N+V MGMGEPLLN NV A+EI+ Sbjct: 128 VRNLTVGEIVGHFLAMESWLGQD-------IKNIVFMGMGEPLLNWENVKKAIEILNHPK 180 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G+ RR+T+STSGVVP + L D +DV L+ SLHAPND+IR +++P+N++Y + + Sbjct: 181 MRGMGIRRITISTSGVVPGILALADSGLDVRLSFSLHAPNDQIRSKLMPVNERYPLGQVV 240 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 A++ + +K+ R+T+EYV+L +ND A+++A LL D INLIP+NP Sbjct: 241 EALQEFQKKTG---NRITVEYVLLKRINDEPSMAYEIAALLSDLDVYINLIPYNPVVE-R 296 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 YGR S SRI+ F L G +RK +G DIDAACGQL G Sbjct: 297 YGRPSASRINPFMATLRELGLEVELRKEKGTDIDAACGQLRGK 339 >UniRef50_B8HRU7 Radical SAM enzyme, Cfr family n=2 Tax=Chroococcales RepID=B8HRU7_CYAP4 Length = 367 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 123/365 (33%), Positives = 202/365 (55%), Gaps = 15/365 (4%) Query: 7 TPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKV 66 T E+ T LL ++ ++ E+ LG+ +R Q+ +W+Y + E++ K Sbjct: 16 TVESAPTHPKLPPLLGASQAELTEWITALGQPAYRGQQLHQWLYQKGVRSLTEISVFPKA 75 Query: 67 LRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGC 125 R ++ EVA + ++ ++ DGT+K+ + + D ++ ETV IP + R T+CVSSQVGC Sbjct: 76 WRQQVAEVA-VGRSQLHYRSQAQDGTVKYLLRLDDGQIIETVGIPSNRRLTVCVSSQVGC 134 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 + C FC+T + GF R+L EI+ QV G ++NVV MGMGEPLLNL Sbjct: 135 PMGCDFCATGKGGFRRHLDRHEIVDQVLTVQADFGQ-------RVSNVVFMGMGEPLLNL 187 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDE 244 V+ A+ + D G + +R +T+ST G+ + +L + + LA+SLHA N +R + Sbjct: 188 EAVLEAVRCLNQDVG--IGQRFLTISTVGIPGQIRRLANHHLQATLAVSLHASNQPLRAQ 245 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P + Y +E L R Y++ + RV+ EY++L +ND +HA +LA+ L+ Sbjct: 246 LIPSARHYPLENLLQECRDYVQLTGR---RVSFEYILLGGLNDLPQHALELAQHLRGFQS 302 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP+NP Y R S R+ F ++L + +R++RG D +AACGQL + + Sbjct: 303 HVNLIPYNPISEVDYQRPSPQRMQHFLQLLQEHHIAASIRRSRGLDQNAACGQLRANQMA 362 Query: 365 RTKRT 369 K + Sbjct: 363 GVKSS 367 >UniRef50_A8ZV25 Ribosomal RNA large subunit methyltransferase N n=9 Tax=Deltaproteobacteria RepID=RLMN_DESOH Length = 371 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 146/354 (41%), Positives = 221/354 (62%), Gaps = 10/354 (2%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + + + +L R + ++ P+RADQV KW++ + ++FD+MT+I+K +R Sbjct: 19 MNSTALPQEIQNLTRARFADWLNAHNIAPYRADQVFKWLFVHRAESFDQMTNISKPVRTL 78 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALEC 129 L E I ++ Q+S+DGT K+ + D +E+V IPE+D TLCVS+QVGCA C Sbjct: 79 LAESFIIGRLKIARTQQSADGTRKYLFELSDGEHIESVLIPEEDHFTLCVSTQVGCAQGC 138 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC TA++GF RNL +EI GQV A K + + +TN+V+MGMGEPL N +NV+ Sbjct: 139 AFCMTAKKGFVRNLTPAEITGQVLGALKTLAP-----EERLTNIVLMGMGEPLANYDNVI 193 Query: 190 PAMEIMLD-DFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPI 248 +++ + D D G S RRVTLSTSG+VP + LG V LA+SL+A +++ RD ++PI Sbjct: 194 TSLDTICDGDCGLQFSTRRVTLSTSGLVPRMAPLGLATTVNLAVSLNATDNKTRDMLMPI 253 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 NK Y IE L A R Y +N+ ++T EY+++ VND + A +L +LL+ K+NL Sbjct: 254 NKTYPIEVLLEACRTYPL---SNRRKITFEYILMAGVNDSEKDALRLVKLLRSIKAKVNL 310 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 IP+N GA + R ++ I+RF ++L +T + R+++G DI AACGQLA D+ Sbjct: 311 IPFNEHEGAAFKRPDDAAIERFKQILHDRQYTVMTRQSKGADISAACGQLAADI 364 >UniRef50_Q1DCU1 Ribosomal RNA large subunit methyltransferase N 1 n=3 Tax=Bacteria RepID=RLMN1_MYXXD Length = 359 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 191/362 (52%), Gaps = 10/362 (2%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 D NL DL R + G P+ DQ+ +Y FDE+ + L L Sbjct: 1 MPSDTSANLYDLTRPALGALLSGWGFGPYHRDQLWTALYRRHATTFDELDGLKPELLRML 60 Query: 72 KEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALEC 129 +E + E SSDG T K + + D +ETV + RAT+C+S+Q GCA+ C Sbjct: 61 REHTRLGQLATHHESFSSDGFTHKLLLRLDDGQTIETVLMRFKGRATVCISTQAGCAMGC 120 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T Q G +R+L EI+GQ+ +I+ A+ + NVV+MGMGEPL N + + Sbjct: 121 VFCATGQMGLSRHLTPGEIVGQILHVNRILRAS----GETLRNVVLMGMGEPLHNYEHTM 176 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPI 248 A+++++D G + R +TLST GVVP + +L D + LA+SLH D R +VP Sbjct: 177 SAVDVLVDALGLAMGPRFITLSTVGVVPGIRRLADEERPIHLAVSLHGATDAERAALVPA 236 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 +++ ++ + A R Y EK + R+ E+ ++ ND EHAH L +LL+ +N+ Sbjct: 237 GRRWPLDELMDACRYYSEK---RKRRIFFEWTLISGRNDTAEHAHTLGQLLRGMDAHVNV 293 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 IP NP G G S + F VL +Y + VR+ RG DIDA CGQL V R++R Sbjct: 294 IPLNPTVGYDGGPSRPESVRAFQDVLATYDVPSTVRQRRGIDIDAGCGQLKATVERRSRR 353 Query: 369 TL 370 +L Sbjct: 354 SL 355 >UniRef50_C9M5U8 Radical SAM enzyme, Cfr family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5U8_9BACT Length = 352 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 144/360 (40%), Positives = 209/360 (58%), Gaps = 14/360 (3%) Query: 17 KINLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +I L+L+ + ++ G K F ADQ+ +W+Y +++ MT+++K LR L E Sbjct: 4 RIQGLELSYDEWLTLIQEQFGAKKFVADQICQWIYQKKVFDWNGMTNLSKDLRAALAERV 63 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P +VE Q S+DGT K+ + D RVE+V + + T C+SSQVGC L+C FC+T Sbjct: 64 SIVPPVLVERQISADGTKKYLWELSDGARVESVLMDHGNHLTACLSSQVGCPLKCAFCAT 123 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + GF RN+ EI+G +G +PI NVV MGMGEPLLN NV A+ Sbjct: 124 GRGGFERNMTAGEIVGHFLAMEADLG-------KPIGNVVFMGMGEPLLNFVNVERAIRC 176 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 +L+ G+ R VT+ST+GV + KL D + V L +SLHAPNDE+R ++PIN++Y Sbjct: 177 LLEPKMRGMGVRHVTISTAGVADGIRKLADSGLGVYLCLSLHAPNDELRSRLMPINERYP 236 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + L A++ + K+ R+T+EYV++ V D E A++L L D +NLIP+NP Sbjct: 237 LPQVLDALKYWQGKTGV---RLTVEYVLIKGVTDLPELAYELPTLFSDLQTYVNLIPYNP 293 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 + + R S SRI+ F+K+L G VR+ +G DIDAACGQL +R RKR Sbjct: 294 VIPS-FSRPSASRIEPFAKILRELGMEVEVRREKGTDIDAACGQLRAKKDRPGERETRKR 352 >UniRef50_Q6MDD0 Ribosomal RNA large subunit methyltransferase N 2 n=2 Tax=Parachlamydiaceae RepID=RLMN2_PARUW Length = 358 Score = 446 bits (1147), Expect = e-124, Method: Composition-based stats. Identities = 136/345 (39%), Positives = 203/345 (58%), Gaps = 10/345 (2%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++ D + Q++ E+ K GEK F A Q++ W+Y ++D+M+++++ LR KL + + Sbjct: 1 MDYADFDHQKLVEWLKAHGEKEFHAKQILSWIYQKGVLSWDKMSNLSQSLREKLAKHIRL 60 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 E+V S D TIK+ + D VE+V I R T+CVSSQVGC +C FC++ Sbjct: 61 PVLELVRYTESIDQETIKFLWRLRDGNLVESVLILSGIRRTVCVSSQVGCPAKCAFCASG 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 QQGF RNLR +EII Q+ + + + +++VV MGMGEPL N +VV ++ ++ Sbjct: 121 QQGFFRNLRPTEIIEQILQINAWLSSK----GEKVSHVVYMGMGEPLKNYESVVASIRVL 176 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 +S+RR+T+ST GVV + +L + + V L +SLHAPN IR +I+P +KY + Sbjct: 177 SHPDFCNISQRRITVSTVGVVEGIKRLSKEGLKVNLVLSLHAPNQHIRKKIIPYARKYPL 236 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L ++ Y +K+ + +T EY +L +ND +HAH+LA LLK C +NLIP+NP Sbjct: 237 EEILESMDEYAQKTKRD---ITFEYTLLAGINDHPDHAHELAHLLKGKQCTVNLIPYNPI 293 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 PG R I +F VL R T+GDDI AACGQLA Sbjct: 294 PGLRLKRPEKKAIKQFRSVLYGSHIVNTCRYTKGDDIGAACGQLA 338 >UniRef50_D2RNU4 Radical SAM enzyme, Cfr family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RNU4_ACIFE Length = 353 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 203/356 (57%), Gaps = 12/356 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L ++++ LG K FRA+QV +W+Y +F +M++++K R +L + Sbjct: 3 KKEIMGLTLEELQTELAGLGMKKFRAEQVFRWLYEKAATDFSQMSNLSKDARQQLADRYT 62 Query: 77 IRAP--EVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFC 132 I +V++E RS DG T K + + D VETV + D ++C+SSQVGCA+ C FC Sbjct: 63 IATAQVKVLKEYRSRDGLTHKVLLELTDGATVETVLMHHDYGYSVCLSSQVGCAMNCAFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL +EI+ Q++ + G ++ +V+MG GEP+LNL+NV+ A+ Sbjct: 123 ASGLHGFVRNLTAAEILAQLYFFQSGL----QPGGERVSRIVVMGSGEPMLNLDNVLKAL 178 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKK 251 +I+ D G + R +T+ST GVVP + +L ++ LAISLH + E+R+ ++PIN+K Sbjct: 179 DILHSDRGQCIGYRNMTVSTCGVVPGIQELTAQGRNINLAISLHGASQELRNRLMPINRK 238 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + A Y + + +V EY++L +ND E A LA+ L+ C INLIP Sbjct: 239 YPFPEVIQAADAYEKSNGR---QVMYEYILLAGINDRPEDARNLADALEHKECVINLIPA 295 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 NP P + R S+ +DRF ++L VRK G DI+AACGQL + + Sbjct: 296 NPVPEKGFERPSDRAVDRFFQMLKKRRLNVTVRKEMGKDINAACGQLRASALKEAQ 351 >UniRef50_Q2S0P9 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Rhodothermaceae RepID=RLMN_SALRD Length = 369 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 137/374 (36%), Positives = 219/374 (58%), Gaps = 16/374 (4%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M + V T + +++L + R +++F + G +R DQ+ W+Y +FD M Sbjct: 1 MPDVKTASHTVGTAEDRVDLKTMGRAGLKDFVAEHGAPRYRGDQLFNWVYGKGVSDFDRM 60 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD------ 113 +++ K +R L+ A + E+VE+Q+++D T+K + R ETV IP D Sbjct: 61 SNLPKRMRRGLQRDATVEDIEIVEQQQAADRTVKALFELPSGREAETVLIPAIDERGEAR 120 Query: 114 RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNV 173 R T+CVSS+VGCA+ C+FC+T + GF NL I QVW ++ A+ RP+TN+ Sbjct: 121 RLTVCVSSEVGCAMGCEFCATGRMGFRENLTPGAIFDQVWHMNEV---AQEHFGRPVTNI 177 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAI 232 V MGMGEPLLN + V+ ++ I+ D+ LS +++T+ST G+ + L D + LA+ Sbjct: 178 VFMGMGEPLLNYDAVLDSISILTDEDSLNLSAQKITVSTVGLARRIKDLADDQLRTNLAV 237 Query: 233 SLHAPNDEIRDEIVPINK--KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 SLHAP++E R I+P+N+ K ++ A++ Y +K+ ++T EY + VND Sbjct: 238 SLHAPDNETRSRIMPVNEAEKTSLPALKEALQYYFDKTGR---QITYEYCLFKGVNDSET 294 Query: 291 HAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 A LA++ + P K+NL+ +NP G + R+S +++DRF +VL+ G T VR++RG D Sbjct: 295 DARNLADVTRWAPSKVNLLMYNPVEGLNFERTSEAQLDRFVQVLVQEGVTVTVRRSRGQD 354 Query: 351 IDAACGQLAGDVID 364 IDAACGQLA + D Sbjct: 355 IDAACGQLANEGED 368 >UniRef50_Q3AC22 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RLMN_CARHZ Length = 342 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 126/348 (36%), Positives = 205/348 (58%), Gaps = 13/348 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 LDLN +++ + K+ EK FR Q+ +W++ + +F++MT++ LR KLKE + + Sbjct: 4 FLDLNSEEIVAWLKENNEKSFRLKQINEWIFKHGELDFNKMTNLPVRLREKLKENFLLPS 63 Query: 80 PEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 +++ ++S DG +IK+ + + D +E V + T+C+S+QVGC + CKFC+T Sbjct: 64 LKIIHSKKSRDGQSIKYLLKLKDNLGIEAVLLKYRYGNTVCLSTQVGCKMGCKFCATGLG 123 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF+RNL E+I Q+ K + IT VV+MG GEPL N V+ M + + Sbjct: 124 GFSRNLTAGEMIEQILVL-------KASSSEKITRVVLMGSGEPLDNFTEVLKFMRKINE 176 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 +S R++T+ST G+VP + L + + V LAISLHAP+D +R+E++PINK++ + Sbjct: 177 KDCLNISYRKITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAE 236 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A +++K+ RV+ EY ++++VND EHA +LA+LL+ +NLIP+N Sbjct: 237 LLDAAWYFIDKTGR---RVSFEYALIENVNDTVEHALKLAQLLQRKLVHVNLIPYNTIEK 293 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 + S +I++F +VL G VR+ GD+ID ACGQL + Sbjct: 294 RNFKTPSVEKINKFKEVLKRAGIPVTVRRELGDEIDGACGQLKAKYFE 341 >UniRef50_A7ZGB0 Ribosomal RNA large subunit methyltransferase N n=41 Tax=Epsilonproteobacteria RepID=RLMN_CAMC1 Length = 381 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 139/366 (37%), Positives = 209/366 (57%), Gaps = 26/366 (7%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 NLLDL+ ++++E FRA Q+ +W+Y F +M ++ K +R L E + Sbjct: 3 NLLDLSIEELKELVS----PSFRATQIYEWVYKKNATEFSQMLNLPKDMRQDLAEKFYLD 58 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDD-------------RATLCVSSQVG 124 + V+ ++SSDG+IK+ + D ++E+V +P + R T+CVSSQVG Sbjct: 59 PLKCVKFEQSSDGSIKYLFELKDGLKIESVLLPMKEEISDEDGKISRHARYTICVSSQVG 118 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C + C FC TA+ G RNL EI+GQ+ + K+ +R I NVV MGMGEPL N Sbjct: 119 CKMGCAFCLTAKGGLVRNLTAGEIVGQILWIKR---ENKIPYERRI-NVVYMGMGEPLDN 174 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRD 243 L NV A++I+ + G +S RR T+STSG+ + KLG+M + V LAISLHA +E+R Sbjct: 175 LTNVSKAIKILALNEGLAISPRRQTVSTSGLGSQIKKLGEMDLGVLLAISLHAVTNELRS 234 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP 303 ++PINK YNIE + AVR + + RV EY+++ +ND A +L +LL Sbjct: 235 RLMPINKAYNIEAVMDAVRGFPID---MRKRVMFEYLVIKDLNDSVSDAKKLVKLLHGIK 291 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 K+NLI +NP G+ +GR + + +F + L +G T +R+++G DI AACGQL Sbjct: 292 AKVNLIYFNPHEGSEFGRPELASMLKFQEYLRDHGVTCTIRQSKGLDISAACGQLKQRNE 351 Query: 364 DRTKRT 369 + R Sbjct: 352 NPKFRA 357 >UniRef50_Q72HC1 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Deinococci RepID=RLMN_THET2 Length = 355 Score = 442 bits (1138), Expect = e-123, Method: Composition-based stats. Identities = 140/354 (39%), Positives = 198/354 (55%), Gaps = 16/354 (4%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + +L+L +++ GE +R Q+ W+Y +F EMTD+ K LR Sbjct: 1 MAASHALKPILELLPEELP------GEG-YRRAQIAHWLYAKGARDFSEMTDLPKALREA 53 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALEC 129 L + +V+ S DG++K+ + D + E VY+P ++R T+C+S+ VGC C Sbjct: 54 LAREWRLSEFSLVQAFPSQDGSVKYLFTLLDGKKTEAVYMPYENRKTVCLSTMVGCPAGC 113 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T GF RNL +EI+ Q+ A G + R I NVV+MGMGEPLLNL NV+ Sbjct: 114 TFCATGALGFGRNLTAAEILDQLLTIAYHQGLSP----REIRNVVLMGMGEPLLNLRNVL 169 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPI 248 A+ IML LS RRVTLST G+ + +L + + V LA+SLHAP+DE R +I+P Sbjct: 170 KAVRIMLHKKALALSPRRVTLSTVGIPKGIYRLAEEDLGVRLALSLHAPDDETRRKIIPT 229 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 +Y I + AVR Y K+ RVT EY +L VND A LA+LLK +NL Sbjct: 230 AHRYPIAEIMEAVRHYHAKTKR---RVTFEYTLLKGVNDHLWQARLLAKLLKGLSAHVNL 286 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 IP+NP+ GAP + + + F++ L G T +R +RG D+ AACGQLA V Sbjct: 287 IPFNPWEGAPVAGTPKAGVLAFAEELKRLGVPTSIRWSRGQDVGAACGQLALKV 340 >UniRef50_A4XL78 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Clostridia RepID=RLMN_CALS8 Length = 344 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 125/355 (35%), Positives = 206/355 (58%), Gaps = 15/355 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K + D +++++ ++ GEKPFRA+Q+ +W+Y + + T+I LR +++E Sbjct: 2 KRLIKDFTFDELKKWVEETGEKPFRANQIFEWLYKKNATDVNSFTNIPTQLRKRIEEEFI 61 Query: 77 IRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 + + VV+ + SDG +IK+ + + D +E+V++P +C+S+QVGC ++C FC++ Sbjct: 62 LNSLRVVKYE--SDGESIKFLLELVDGNAIESVFLPYKYGNAICISTQVGCRMKCAFCAS 119 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNL E++ Q+ I ++ I+NVV+MG GEP N+ NV ++I Sbjct: 120 TIGGMIRNLSAGEMVDQIVNIENI-------TKKKISNVVLMGSGEPFDNIENVFKFIDI 172 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYN 253 + G + R +T+ST G+V + KL + V LAISLHAPN+ +R+++VP+N+KY+ Sbjct: 173 INSKEGKNIGARHITISTVGIVDGIYKLSEYPKQVNLAISLHAPNNNLRNKLVPMNRKYS 232 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 IE L AV Y+ K+N RVT EY ++D VND E A++LA++L +NLIP NP Sbjct: 233 IEDILKAVDYYISKTNR---RVTFEYALIDGVNDSIECANELAKILSGKLVHVNLIPVNP 289 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 G + + R+ F VL+ G +R+ G I AACGQL + +++ Sbjct: 290 VNGRNFKKPPKERVKEFYNVLILSGIQVTIRRELGSSIAAACGQLRSRHYNISEK 344 >UniRef50_Q7X370 Putative uncharacterized protein n=2 Tax=uncultured Acidobacteria bacterium RepID=Q7X370_9BACT Length = 413 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 141/368 (38%), Positives = 217/368 (58%), Gaps = 21/368 (5%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + + + ++ + R ++ + LG F A Q+ +W+Y +F M+D+ + LR + Sbjct: 42 IMSNHTRTDIAESERHELEHTLERLGHPRFHARQIFQWVYKRGITDFALMSDLGRDLRAQ 101 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----------RATLC 118 L E I P V ++RS DGT+K+ + + D R +E+V+IP++ R T C Sbjct: 102 LAESCVITTPVVERQERSQDGTVKFLLRLADGRHIESVFIPDETPAGPDGSPRAARITFC 161 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 VS+QVGCA++C FC T + G +R+L EI GQV A+ +G + N+V+MGM Sbjct: 162 VSTQVGCAMKCAFCLTGKMGIDRSLTAGEIAGQVRVLARELGFLETRF-----NIVLMGM 216 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAP 237 GEPL N + A+ ++ D+ GF +S RR+TLST GV+PAL++L + + LAISLHA Sbjct: 217 GEPLHNYEETMKALRVLADEHGFAMSARRMTLSTVGVLPALERLATEPLMPNLAISLHAT 276 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 ++ RD +VPIN+KY ++ L A RR+ K + R+T EYV+L VND E A +L + Sbjct: 277 TEDQRDLLVPINRKYGLKELLDACRRFPLK---RRERITFEYVLLREVNDTPEDARRLVK 333 Query: 298 LLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQ 357 LL K+NL+P N G P+ R S+ R++ F+++L +G VRK+RG DI AACGQ Sbjct: 334 LLHGIKGKVNLLPLNEAAGIPFERPSDDRVNSFARILADHGIPVSVRKSRGRDIRAACGQ 393 Query: 358 LAGDVIDR 365 L + + Sbjct: 394 LITESDRK 401 >UniRef50_Q1Q215 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q215_9BACT Length = 368 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 124/363 (34%), Positives = 198/363 (54%), Gaps = 18/363 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ +L+ + E + LGE +R Q++ WMY +F++M+DI R KL+E + Sbjct: 8 SITELDLSESVELCRSLGEPSYRGKQILSWMYKKGATDFNQMSDIPLPFREKLEEAHNVF 67 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 ++ S DGT K+ I + D +E V + + R T CVS+QVGCA+ C FC++ Sbjct: 68 QTKIHTINTSQDGTEKFLIHLPDNNLIECVLLRDGKRRTACVSTQVGCAMGCSFCASGVL 127 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G RNL+ EII QV + ITN+V MG+GEPL N + VV ++ IM Sbjct: 128 GLTRNLKTGEIIEQVLHIKNHL-----PANEHITNIVFMGIGEPLANYDKVVKSLRIMNA 182 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 D+G + R +T+ST G++ + +L + + V LAISLHA ND R+++VP N K I+ Sbjct: 183 DWGLAIGARNITISTVGLIEGIRRLAKEGLKVNLAISLHASNDNTRNKLVPSNSKTGIKN 242 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A + Y ++ + ++ EY M+D +ND + A LA++LK C +N++P NP Sbjct: 243 ILGAAQEYFNATHRD---ISFEYTMIDGINDSKQDAKLLAQILKGVQCNVNILPVNPIKE 299 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQG 376 + ++ F VL ++G VR+ +G +++AACGQL + ++K G Sbjct: 300 GNFAPPVQKTVETFCTVLKNHGIVATVRQRKGINVNAACGQL--------RLQIQKHCHG 351 Query: 377 EAI 379 E I Sbjct: 352 EKI 354 >UniRef50_A5UT23 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Roseiflexus RepID=RLMN_ROSS1 Length = 399 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 130/394 (32%), Positives = 190/394 (48%), Gaps = 47/394 (11%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + +D NL DL+ +M G+ +RA Q+ + +Y D+ MTD+ LR + Sbjct: 1 MMNQDTLPNLYDLSLAEMERLMTAWGQPAYRARQIFRQLYVNLVDSPLAMTDLPLALRER 60 Query: 71 LKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALE 128 L + + + G T K + + +E+V + DRAT+CVS+Q GC + Sbjct: 61 LVAETRLAPLAPEQVHVADQGLTRKALFRLENGVLIESVLMIYPDRATVCVSTQAGCGMG 120 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG---------------------- 166 C FC+T G RNL +I+ QV AA+ + Sbjct: 121 CVFCATGTLGLLRNLSPGDIVAQVVWAAREMRRFAAERCISPSLAPPDDDSWWTPDTLED 180 Query: 167 ----------QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV 216 ++N+V MGMGEP N + A+EI+ D G + R +T+ST G++ Sbjct: 181 QGSSEARSISVSRLSNIVFMGMGEPFANYDRWWRAVEILHDPRGLNMGARSMTVSTVGLI 240 Query: 217 PALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRV 275 P + +L + + + LAISLHAP+D +R ++P+N++Y + L A R YL + RV Sbjct: 241 PGIRRLATETLPINLAISLHAPDDALRSALMPVNRRYPLAALLEATRDYLAATGR---RV 297 Query: 276 TIEYVMLDHVNDGTEHAHQLAELLKDT---------PCKINLIPWNPFPGAPYGRSSNSR 326 + EYV+L ND EHA +LA LL +NLIPWNP PG P GRS R Sbjct: 298 SFEYVLLQGKNDEPEHAAKLAALLHGEAGTTPLPLHLVHVNLIPWNPVPGMPLGRSERRR 357 Query: 327 IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 + F ++L G VR RG I AACGQLAG Sbjct: 358 VLTFQRILRERGIACTVRVERGVSIAAACGQLAG 391 >UniRef50_A5D1B6 Ribosomal RNA large subunit methyltransferase N n=13 Tax=Clostridia RepID=RLMN_PELTS Length = 368 Score = 439 bits (1130), Expect = e-122, Method: Composition-based stats. Identities = 130/364 (35%), Positives = 200/364 (54%), Gaps = 14/364 (3%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 E +IN+ DL + +G + +RA QV W++ ++F EMT++ LR Sbjct: 10 EGSPVVGDRINVKDLTLAGLERLLTGMGAERYRAGQVAIWVFQKGAESFREMTNLPANLR 69 Query: 69 GKLKEVAEIRAPEVV-EEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCA 126 KL A I PE++ ++ S +K+ + D + VE+V++ ++CVS+Q GC Sbjct: 70 EKLDAAAVISRPEILAKKVSSKKDAVKYLFGLPDGQAVESVFMKHAYGNSVCVSTQAGCR 129 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC++A G RNL EI QV + G I++VV+MG GEPL N + Sbjct: 130 MGCRFCASALGGLTRNLSPGEIYDQVLGIRRDTG-------ERISSVVLMGSGEPLDNYD 182 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEI 245 + ++ + +G + R +T+ST G+VP + +L + + + LA+SLHAPND +RD + Sbjct: 183 ATLTFIKNVTAPYGLHIGCRHITVSTCGLVPGIRRLAREKLALTLAVSLHAPNDRLRDIL 242 Query: 246 VPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD-TPC 304 VP+N+KY + +AA R Y +++ RVT EY +L VND EHA +L LLK PC Sbjct: 243 VPVNRKYPLTELMAACRDYAQETGR---RVTFEYALLAGVNDRKEHAEELVRLLKGKMPC 299 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP NP P S +++ F K+L +G VR+ G DIDAACGQL + Sbjct: 300 HVNLIPANPVPERGVKTPSRLQVELFKKILERHGLAVTVRRGLGADIDAACGQLRRKIAV 359 Query: 365 RTKR 368 +R Sbjct: 360 MGER 363 >UniRef50_Q0AXL8 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RLMN_SYNWW Length = 357 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 142/360 (39%), Positives = 211/360 (58%), Gaps = 10/360 (2%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 K LL L+ QM EF L E FR QV KW+Y C +F EM+D+ + LR KL Sbjct: 1 MNSIEKKQLLGLDLNQMEEFLLGLEEPRFRGRQVYKWIYQKECSSFYEMSDLPRSLRKKL 60 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIP----EDDRATLCVSSQVGCA 126 E A + P V++++ DG+ K+ + + D++ +E V +P + TLC+S+QVGC Sbjct: 61 DEKARVSIPRVLKQRVGKDGSRKFLMELDDKKKIECVLLPQSRDKKSSYTLCLSTQVGCP 120 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAA-KVTGQRPITNVVMMGMGEPLLNL 185 + C FC+T Q GF RNL+ EIIGQ + K + K I+NVV MGMGEPLLN Sbjct: 121 IACSFCATGQSGFQRNLKAFEIIGQYLGSKKELSKRLKSPRAELISNVVYMGMGEPLLNY 180 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDE 244 + V+ ++ ++ D G L +RR+T+STSG V + KL + I + LAISLHA ++ +RD+ Sbjct: 181 DEVIKSVHMLNDPRGINLGQRRITISTSGEVAGIKKLAQENIQLTLAISLHACDNSLRDQ 240 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P+N+KY +E A+ Y+ + RVT EY++LD VN A+++ +LLK Sbjct: 241 LIPLNRKYPLEVLFPAIEDYIAFTGR---RVTFEYLLLDEVNMSRNDANKMVKLLKPLLA 297 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP+N G P+ + ++I +F + L G +R+ RG DI+AACGQL D Sbjct: 298 NLNLIPYNEIEGLPFKKPETAKIWQFYQWLQDGGLNVSIREERGSDINAACGQLRSDYRR 357 >UniRef50_C6I0U3 Radical SAM family protein n=3 Tax=Leptospirillum RepID=C6I0U3_9BACT Length = 357 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 148/353 (41%), Positives = 206/353 (58%), Gaps = 7/353 (1%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE-VAE 76 +NLLD E + G +R QV W+Y + +M++I +R L Sbjct: 1 MNLLDHPPSTWGEILEKRGHPAYRGRQVAHWVYQRLTTDPRKMSNIPPGVRDLLSSGTLS 60 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + P V+ +S DGT+K A+ + D +E+V IP + TLC+S+Q GC + C+FC TA Sbjct: 61 LDLPTVLSTAQSLDGTVKMALRLQDGPVIESVLIPRKGQWTLCLSTQAGCGIGCRFCRTA 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G RNL +EI+ Q AA+ V G+ I ++V MGMGEPL NL ++PA+ + Sbjct: 121 SMGLTRNLSTAEILSQWLLAARFVETLP-PGESHIDHIVFMGMGEPLANLEALIPAIRSL 179 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 G GLS RR+T+STSG+VP +D LG+ V LAISL AP+D +R EI+P+ + Y+I Sbjct: 180 THPDGAGLSPRRITVSTSGLVPRIDTLGEANTGVRLAISLCAPDDALRREIMPVGRIYSI 239 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E LAA RR+ N+ R+T EYV+L VND A QL LL K+NLIP+NPF Sbjct: 240 EEILAACRRFPL---RNRDRITFEYVLLAGVNDSPLQARQLGRLLAPFRSKVNLIPFNPF 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 PG+PY R ++S + F +VL + T VRK+ G D+ AACGQLA + D T Sbjct: 297 PGSPYHRPTDSSVAAFQEVLAGFHITATVRKSMGPDVLAACGQLARESQDHTP 349 >UniRef50_C0WD85 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD85_9FIRM Length = 352 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 131/357 (36%), Positives = 198/357 (55%), Gaps = 12/357 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K +L L +QM++ F LG K FRA+QV +W+Y F+EMT+++K R L+ Sbjct: 2 TKKEILGLTLEQMQDEFLALGLKKFRAEQVFRWIYEKGATTFEEMTNLSKENRSLLEGTY 61 Query: 76 EI--RAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKF 131 I A +V+ S+D T K + + D VETV + D + C+SSQVGCA+ C F Sbjct: 62 SILSGAVKVLRTYDSADRLTHKVLLGLSDGASVETVLMHHDYGYSACLSSQVGCAMNCTF 121 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C++ GF RNL EI+ Q++ ++ + ++ +V+MG GEP+LNL+NV+ A Sbjct: 122 CASGLHGFMRNLTAGEILAQLYYFDHVL----LPKGERVSRIVIMGSGEPMLNLDNVLAA 177 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINK 250 +++M D G +S R +T+ST G+VP ++++ + LA+SLHA +RD ++PIN Sbjct: 178 LDLMHHDKGQCISYRNMTISTCGIVPGIEEMTRQGRTINLAVSLHAATGALRDRLMPING 237 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 KY + A RY + + +V EY++L +ND E A LAE L C +NLIP Sbjct: 238 KYPFPEVIDAASRYEKMNGR---QVMYEYILLAGINDREEDARALAEALSGKECVVNLIP 294 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 NP P + R + +DRF + L VRK G DI+AACGQL + + Sbjct: 295 ANPVPEKGFRRPEDRDVDRFFQYLKKRHINVTVRKEMGKDINAACGQLRASQLKEEQ 351 >UniRef50_C5CGV5 Radical SAM enzyme, Cfr family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGV5_KOSOT Length = 343 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 134/353 (37%), Positives = 197/353 (55%), Gaps = 14/353 (3%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 + LL++ ++R+ D G + +RA Q+ W+Y NF MT++ K R L Sbjct: 1 MQLLEMTLDELRKVLVDEGYEKYRASQIFDWIYKKKVLNFSNMTNLPKDFRKFLSGTFRY 60 Query: 78 RAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 +V S DGT K+ + D +E+V + D T C+S+QVGC L C FC+T Sbjct: 61 PEMTIVRRSLSKIDGTEKFLWKLHDGEFIESVILRHPDHTTFCISTQVGCQLGCIFCATG 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 GF RNL VSEI+GQV K +G +TN+V MGMGEP LN +NV ++EI+ Sbjct: 121 MSGFKRNLSVSEIVGQVIFMEKSMGKN-------VTNIVFMGMGEPFLNTDNVFKSIEIL 173 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 + G L R T+ST+G+ + +L D +DV L++SLHA DE R ++PINK+YNI Sbjct: 174 HEPAGRNLGIRHFTISTAGIPEGIIRLADSGMDVRLSLSLHAATDEKRSMLMPINKRYNI 233 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + +A++ Y K+N R+TIEY+++D +ND E A QLA+L K +N+I NP Sbjct: 234 QQLMASLEYYQRKTNR---RITIEYILIDGINDSIEDAKQLAKLFKHLKIFVNIIAINPV 290 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 R S +++RF+ L +G +R +G DIDAACGQL + + Sbjct: 291 V-PTLKRPSREKVERFAIELKKHGIEAAIRTEKGSDIDAACGQLRRKNLQEER 342 >UniRef50_C9KJ31 Radical SAM enzyme, Cfr family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ31_9FIRM Length = 347 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 128/349 (36%), Positives = 195/349 (55%), Gaps = 8/349 (2%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ L ++++E + +RA Q+ +WMY F +MT+++K LR +L I Sbjct: 3 DIFGLTVEELQEALQPFSLPKYRARQIAEWMYQRGATGFADMTNLSKKLREELSGAFVIG 62 Query: 79 APEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 P+ + SSDG T K+ + D VETV + + ++CVS+Q GC + C FC++ Sbjct: 63 RPKCKDRLDSSDGHTTKFLLEFTDGTAVETVLMRQPYGNSICVSTQAGCNMGCAFCASTL 122 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL EI+ Q + ++ A + VV+MG GEPL+N NV+ + ++ Sbjct: 123 HGMARNLTTGEILSQAIVISDMLRAE--GQGEKVDTVVIMGSGEPLMNYENVLGFIRLLH 180 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIE 255 +D+ GLS R +TLSTSG+VP + KL + I ++L++SLHAP E+R ++PIN+KY + Sbjct: 181 EDYVLGLSYRSITLSTSGIVPQMYKLAEEGIPISLSVSLHAPEQELRSTLMPINRKYPLV 240 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + A R Y E + RVT EY+++D VNDG E A +L LL+ +NLIP NP Sbjct: 241 DVVRAARHYAEVTKR---RVTYEYILIDRVNDGEEQARELVSLLRGQLASVNLIPINPVA 297 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 R S +RID F L ++ VR+ G DI AACGQL ++ Sbjct: 298 ERHLLRPSAARIDWFEHYLTAHHINVTVRREMGTDIQAACGQLRNKHLE 346 >UniRef50_B9XSY7 Radical SAM enzyme, Cfr family n=1 Tax=bacterium Ellin514 RepID=B9XSY7_9BACT Length = 378 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 129/372 (34%), Positives = 203/372 (54%), Gaps = 28/372 (7%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ ++++ FK+L + +R Q+++W+Y + ++D MT++ K LR L++ ++ Sbjct: 4 DIKSYTSEELQARFKELNQPGYRVGQLLEWLYVHRVASWDAMTNLPKGLREVLQKEFTLQ 63 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPED--------DRATLCVSSQVGCALEC 129 E+V Q S D T K+ + D +E+V IP + DR TLCVS+QVGCA C Sbjct: 64 TLELVRRQGSRDTTQKFLWKLNDGAMIESVLIPANPALYGEASDRHTLCVSTQVGCAYGC 123 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP---------------ITNVV 174 KFC++ +G+ RNLRV EI+ Q+ + A + G +P I N+V Sbjct: 124 KFCASGLEGWKRNLRVEEIVEQILAIERWNAAEEAKGSKPPEANPKPKTTEVTRFINNLV 183 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAIS 233 +MGMGEPL N N++ A+ I+ +G G+ R++T+STSG+ P + KL D LAIS Sbjct: 184 IMGMGEPLANYENLLKALRILNAPWGGGIGARKITISTSGLAPQIRKLADDPLQFRLAIS 243 Query: 234 LHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 LH DE+R++I+P+NKKY ++ AA Y +K +T EY+++ VNDG + Sbjct: 244 LHGATDEVRNKIMPVNKKYPLKELTAACEYYQQK---KDRMITFEYILIAGVNDGLDQVK 300 Query: 294 QLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDA 353 LA+L K+NLIP+N + R + + + F L +R+ +G DIDA Sbjct: 301 PLAQLAHRLNAKVNLIPYNKVEDLTWERPTEAAQEAFLATLEKERVVATLRREKGHDIDA 360 Query: 354 ACGQLAGDVIDR 365 ACGQL Sbjct: 361 ACGQLRLKTERE 372 >UniRef50_B2A2K6 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RLMN_NATTJ Length = 351 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 133/357 (37%), Positives = 197/357 (55%), Gaps = 15/357 (4%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + K +L DL +++E+F G + FRA Q+ WMY D+ + M++I K LR +L E Sbjct: 3 NHKQSLKDLTLNELQEYFSRKGWQQFRAKQIFDWMYIQQVDSIEVMSNIPKKLRQELMEN 62 Query: 75 AEIRAPEVVE---EQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 I E+ +DGTIK+ + D VET + D T+C+SSQ GC + C Sbjct: 63 CTINDLELDSNNIYTSPTDGTIKFLSVLKDGIGVETTIMKYDYGNTVCISSQAGCNMNCV 122 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC++ G R+L E+I QV A K++ G I N+V+MG GEPL N +++ Sbjct: 123 FCASTTGGKERDLSPGEMIDQVLMANKVL-----PGSESINNIVVMGSGEPLENYQHLIK 177 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPIN 249 ++I+ D G + R +T+ST G+VP + L + + + LAISLHAPNDE+R++++P+N Sbjct: 178 FLKIVNDGKGLNIGMRHITVSTCGLVPEIYNLAEEELQLNLAISLHAPNDELRNKLIPLN 237 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--DTPCKIN 307 K Y I L A + Y +K+ R+T EYV++ ND + A +L+E L P +N Sbjct: 238 KIYPIHELLEACQVYFQKTGR---RITFEYVLIKDFNDSIDLAKELSETLTALKMPVHVN 294 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 LIP+NP + +SRI F L S VRK RG D+D ACGQL V+ Sbjct: 295 LIPFNPVEETKFTAPPSSRISDFKNNLQSNNIGVTVRKERGVDVDGACGQLRSKVMR 351 >UniRef50_A7HNQ1 Ribosomal RNA large subunit methyltransferase N n=11 Tax=Thermotogaceae RepID=RLMN_FERNB Length = 348 Score = 436 bits (1121), Expect = e-121, Method: Composition-based stats. Identities = 138/357 (38%), Positives = 207/357 (57%), Gaps = 16/357 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 + N+LD + +++ + F +G + FR DQV W+Y +FD+MT+++K R L E Sbjct: 2 RKNILDFSYEELVDEFSKIGLEKFRVDQVWDWIYKKHEFDFDKMTNLSKEHRNTLSERFY 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I PE+++ Q S D T K+ + D +E+V + DR T C+S+QVGC +C FC+T Sbjct: 62 IYVPELLDMQISQIDKTTKFLWKLEDDNTIESVLLFHPDRVTACISTQVGCPAKCAFCAT 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 Q GF RNL EI+ Q+ K I N+V MGMGEPLLN VV ++++ Sbjct: 122 GQSGFVRNLSAGEIVSQIIAMEKHRKVN-------IGNIVYMGMGEPLLNYKEVVKSVKM 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYN 253 + G +S RR+++ST G+ + +L D+ +V LAISLHAPN+ RD IVP+NKKY+ Sbjct: 175 LNHKKGKNISMRRISISTVGIPEKIVELAQDLPEVKLAISLHAPNNYKRDIIVPMNKKYS 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 +E + + + Y + + + RVT EY+++ ND + A +LAELLK +NLIP NP Sbjct: 235 VEEIIQSAKEYQKIT---KNRVTFEYILIREFNDFVDDAEKLAELLKGMGAYVNLIPVNP 291 Query: 314 FPGAP---YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 P + + R + I+RF +VL + +R+ +G DIDAACGQL I K Sbjct: 292 VPSSGELKFERPHHWAIERFKEVLDKHNIENEIRREKGTDIDAACGQLRRRYITNKK 348 >UniRef50_Q6MPV7 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Bdellovibrio bacteriovorus RepID=RLMN_BDEBA Length = 399 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 136/359 (37%), Positives = 214/359 (59%), Gaps = 11/359 (3%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 ++ +N L + ++ + K G++ FRA Q+ KW+Y + ++MT+++K R Sbjct: 20 AKPLENQPVNFYSLTLEDLKAYIKSKGKEQFRAQQIFKWVYEQRVTDPEQMTNLSKEFRQ 79 Query: 70 KLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALE 128 L + P V++ +S DGT K+ + D VE V IP +DR TLC+SS+VGC + Sbjct: 80 DLPSMLSFDLPPVLQHLKSVDGTQKFLFDMKDGMSVEAVVIPSEDRLTLCISSEVGCNMA 139 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 CKFC T +Q R LR +I+GQ + ++ + ITN+V MGMGEPL N V Sbjct: 140 CKFCFTGKQKLKRRLRTEDIVGQFMQV-----HDRLAEGQRITNIVFMGMGEPLDNPEAV 194 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPI 248 ++++ +G LS++++T+STSG+VP + ++ D V LA+SL+ PNDEIR +++PI Sbjct: 195 FKTIDVIHSPWGINLSRKKITVSTSGIVPEMWRVADA-KVRLAVSLNGPNDEIRSQVMPI 253 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 NK+++ + L A + + S + ++T EYV+L + D EHA QL +L+KD PCKIN+ Sbjct: 254 NKRWDTKALLEACKEHYRVS---KDKITFEYVLLKGITDQLEHARQLVKLVKDVPCKINI 310 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 IP+N PG+ Y R + I F LM+ G ++R++ G DI AACGQL V +R + Sbjct: 311 IPFNEHPGSGYERPDDDTIQAFHTELMNLGAHVLLRRSMGRDIFAACGQL-TTVKERPQ 368 >UniRef50_C7NA88 Radical SAM enzyme, Cfr family n=5 Tax=Fusobacteriaceae RepID=C7NA88_LEPBD Length = 372 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 128/358 (35%), Positives = 204/358 (56%), Gaps = 10/358 (2%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI++L ++ + ++ F ++ K F A QV W+++ NFDE ++I+K R LKE Sbjct: 21 EKIDILGMDLESLQRKFVEIRLKKFNASQVFDWLHNKLVFNFDEFSNISKKDREILKEKF 80 Query: 76 EIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCS 133 + E Q S DG T K+ + D+R +E+V I +R TLCVSSQ+GC + C FC+ Sbjct: 81 YVEKLEFKTHQVSEDGDTEKFLFELKDKRLIESVLISHKNRHTLCVSSQIGCLIGCDFCA 140 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 TA + RNL +SEI+ Q + K + + + NVV MGMGEP LN + V+ ++ Sbjct: 141 TATMTYERNLSISEILLQYYYVQKHL----LQRGEKLGNVVYMGMGEPFLNYDAVLGSIN 196 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKY 252 ++ G SKR T+STSG+V + + + + LAISLH+ D++R+EI+PINK++ Sbjct: 197 MLNSPKGQNFSKRNFTISTSGIVNGIKRFTENENQINLAISLHSVKDDVRNEIMPINKRW 256 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 ++ ++ Y +++ + R+T EY++++ +N E A +LA L C +NLIP+N Sbjct: 257 GVKQLKESLLEYQKQT---KNRITFEYILINDLNCEPEDARELAGFLNSFSCLVNLIPYN 313 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTL 370 P G PY S + F K+L +R+T+G DI AACGQL T +++ Sbjct: 314 PVGGKPYKTPSKQKQREFYKLLKDKNVNVTLRETKGQDIAAACGQLKAKKEMNTSQSI 371 >UniRef50_B5YHG3 Radical SAM enzyme, Cfr family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHG3_THEYD Length = 342 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 136/346 (39%), Positives = 212/346 (61%), Gaps = 11/346 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K NL +L +Q+ + D +R+ Q+++W+Y D+ +++T+ +K LR + E Sbjct: 3 KQNLKELTTKQIEKIILDESLPLYRSKQIVQWIYKKFVDSINDITEWSKSLRERFSEKYY 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I + +++ S DGTIK+ + D ++E+V I + DR TLCVSSQVGC L+CKFC T Sbjct: 63 IGRINLFDKRISIDGTIKFLWELEDGEKIESVLISDKDRLTLCVSSQVGCMLKCKFCLTG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G RNL+ EI+ Q + +KI+ R ITN+V MGMGEPLLN NVV A+ + Sbjct: 123 KIGLKRNLKAWEIVDQYIQVSKIIQKE----NRKITNIVFMGMGEPLLNFENVVEALWRL 178 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D S R+TLST+G++PA+ +L + LAISL+A +++ R ++PINKKY + Sbjct: 179 KD--LILFSPSRITLSTAGIIPAIKELPYKAPAIKLAISLNATDNKTRSYLMPINKKYPL 236 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + +R Y K + R+T EY+++ +N + A++L+ELLK P KINLIP+NP+ Sbjct: 237 HELIKTLRDYPLK---PRHRITFEYILIKGINCSEKDAYRLSELLKGIPSKINLIPFNPW 293 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 G + R ++ I F ++L + G++ +RK++G DI AACGQL Sbjct: 294 EGCEFERPEDNEILNFQEILAARGYSVFIRKSKGTDILAACGQLKA 339 >UniRef50_D2R822 Radical SAM enzyme, Cfr family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R822_9PLAN Length = 391 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 135/337 (40%), Positives = 201/337 (59%), Gaps = 10/337 (2%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQ 86 +++ + + G +RA QV KW++ +FDEMTD+ K LR +L + +VV + Sbjct: 45 ELKTWLTERGYPAYRATQVRKWVFELGASSFDEMTDLPKKLRDELAPEFTLWTGKVVTKS 104 Query: 87 RSSDGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRV 145 S DGT K + G R+E V + + DR ++CVSSQVGCA+ C FC++ G +RNL Sbjct: 105 ESPDGTEKLLVEYPGGGRIECVLLRDGDRRSICVSSQVGCAMGCVFCASGLDGVDRNLTA 164 Query: 146 SEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK 205 EI+ Q+ +++ + ++++VMMGMGEPL N+++V+ A+ + G G+S Sbjct: 165 GEIVEQMLLLQRLL-----PEKERLSHIVMMGMGEPLANIDHVLEALGEATREDGLGISP 219 Query: 206 RRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRY 264 RR+T+ST G+ ALDKL ++ LA+SLHAPN+E+R +VPINK IE + + RY Sbjct: 220 RRITISTVGLPAALDKLCNLEAKYHLAVSLHAPNNELRTRLVPINKAIGIEKVIESADRY 279 Query: 265 LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSN 324 E S R+T EYV+L VND +HA +LAELL +N+IP+NP G PY S Sbjct: 280 FETSGR---RLTFEYVLLAGVNDHPDHAQELAELLAGRTAMLNVIPYNPVAGLPYKTPSG 336 Query: 325 SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 + I RF +L+ G R+ +G +I+AACGQL Sbjct: 337 NAIHRFRNILVDAGINVKFRQRKGSEINAACGQLRRS 373 >UniRef50_D1B0V3 Radical SAM enzyme, Cfr family n=10 Tax=Campylobacterales RepID=D1B0V3_SULD5 Length = 358 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 136/361 (37%), Positives = 202/361 (55%), Gaps = 26/361 (7%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K N+ DL+++++ E K FRA Q+ +W+Y +FDEM ++ K L+ +L E Sbjct: 2 EKENIFDLSKEELSEVIK----PAFRAKQIYQWLYQKYVTSFDEMKNLPKELKEQLNETY 57 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIP-------------EDDRATLCVSS 121 + +V + S DG+ K+ A+ D VE V +P R T+C+SS Sbjct: 58 YLDPLRIVTIEESCDGSKKYLFALKDNQTVEAVLLPMKQEQVDEEGKLVHHARYTICISS 117 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 QVGC + C FC T + GF RNL EI QV + + R + N+V MGMGEP Sbjct: 118 QVGCKIGCAFCLTGKSGFKRNLTAGEITTQVLMIKRD---NAIAENRRV-NIVYMGMGEP 173 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDE 240 L NL NV A+ I D G +S RR T+STSG+ ++KLG M + + LAISLHA +D+ Sbjct: 174 LDNLTNVSKAVRIFSDLDGLSISPRRQTISTSGLSSQIEKLGKMDLGILLAISLHAVDDD 233 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 +R +++PINK YNIE+ + AVR + + + RV EY+++ VND + A +L +LL Sbjct: 234 LRQKLMPINKAYNIESIMNAVRGFPIDA---RKRVMFEYLVMKGVNDDQKSAKKLVKLLH 290 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 K+NLI +NP G+ + R S + F + L+ +G +R+++G DI AACGQL Sbjct: 291 GIKAKVNLIYFNPHAGSDFDRPSTKDMIAFQQYLVDHGVLCTIRQSKGLDISAACGQLKD 350 Query: 361 D 361 Sbjct: 351 K 351 >UniRef50_B8FS78 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Desulfitobacterium hafniense RepID=RLMN_DESHD Length = 357 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 130/359 (36%), Positives = 196/359 (54%), Gaps = 13/359 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +++ DLN+ ++ + +LG FR QV +W+ N++E+ +I R KL+E Sbjct: 5 KRMDCRDLNQSELTQHCAELGLPKFRGRQVFQWVQQKAVQNWEELRNIGAGDRQKLQEGL 64 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPED-----DRATLCVSSQVGCALEC 129 ++ V EQ + DGT K+ D +E V + D DR T+CVS+Q+GCA+ C Sbjct: 65 FLQPLRKVREQIAQDGTRKFLFRCADGETLECVLMDYDRRKNRDRHTVCVSTQIGCAVGC 124 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T G+ RNL EI+GQV ++ Q +TN+V MGMGEPLLN V+ Sbjct: 125 AFCATGLGGWRRNLSPGEILGQVLDITYLMRQEDPDFQ--VTNIVFMGMGEPLLNYEAVL 182 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPI 248 A+E++ D G G+ RR+T+STSGV P + +L D V LA+SLH+ ++ RD+++P+ Sbjct: 183 KAIELLNDPEGQGIGMRRMTISTSGVAPKIRQLAKDNPQVGLAVSLHSAHNTTRDQLIPM 242 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 N+KY +E + A Y +N R+T E ++ E A + LLK +NL Sbjct: 243 NRKYPLEELMEACGDYTTLTNR---RITFEIALISGQ-ATLEAAQAVGHLLKGQLAHVNL 298 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 IP NP G R + + +F++ L S G VR+ +G DIDAACGQL + K Sbjct: 299 IPVNPVAGTGMARPTAKEVQQFAQSLESMGIPVSVREEKGTDIDAACGQLRRQLECEQK 357 >UniRef50_C8W8J4 Radical SAM enzyme, Cfr family n=3 Tax=Coriobacteriaceae RepID=C8W8J4_ATOPD Length = 372 Score = 432 bits (1112), Expect = e-120, Method: Composition-based stats. Identities = 115/355 (32%), Positives = 184/355 (51%), Gaps = 13/355 (3%) Query: 7 TPENVTTK-DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINK 65 TP++ K K +L L+ +Q+ + LG+ FRA Q+ +W++ +FD+M+++ K Sbjct: 21 TPDSRPQKTAAKSDLRSLSSEQILDLVTSLGQPKFRAKQIEEWIWSKGATSFDQMSNLPK 80 Query: 66 VLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVG 124 LR +L + + E V Q S DG+ K+ + D VE V +P ++ ++C S+Q G Sbjct: 81 TLREELSKQVILAGAEQVVRQVSEDGSRKYLLRYPDGTSVECVGMPNGNKLSVCASTQAG 140 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 CA+ C FC+T G R+L SEI QV +T+VV+MG GEP +N Sbjct: 141 CAMGCAFCATGASGLTRSLSASEIYEQVMHVRDDFDT-------RVTSVVLMGQGEPFMN 193 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRD 243 + + AM + G G+ R +T+ST GV+P + + LA+SLH+ + RD Sbjct: 194 YDATLTAMRRLNSPDGAGIGARHITVSTCGVIPMIKRFASEPEQFTLAVSLHSAVQKTRD 253 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP 303 ++P +KY++ + Y++K+ R T EY ++ VND L + + T Sbjct: 254 ALMPGVRKYSLIHLYDIMGEYVDKTGR---RPTYEYALIKGVNDSDNELGALRDFCRGTL 310 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 C +N+I N G+ + +S +R F L S G +R +RG DIDAACGQL Sbjct: 311 CHVNIIQLNEIEGSKFHPTSPARAQEFVNSLNSVGVEATIRLSRGSDIDAACGQL 365 >UniRef50_C1A949 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RLMN_GEMAT Length = 360 Score = 432 bits (1112), Expect = e-120, Method: Composition-based stats. Identities = 144/367 (39%), Positives = 201/367 (54%), Gaps = 20/367 (5%) Query: 18 INLLDLNRQQ----MREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 +LLD + + E+ GE +RA QV ++ +FDEMT++ K LR L Sbjct: 5 PDLLDFDPDAALALLGEWMAARGEPAYRAAQVFGRLWQRPVRSFDEMTELPKALREGLAG 64 Query: 74 VAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFC 132 I A E+ Q+S DGT K+ + D +ETV IP+ DR T C+SSQ GCAL+C FC Sbjct: 65 SFRITALELTTRQKSMDGTEKFLFRMHDGQLIETVAIPDGDRLTFCISSQAGCALQCAFC 124 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T GF RNL SEI GQV + + TN+V MGMGEPL+N V P + Sbjct: 125 ATGAMGFQRNLHPSEIAGQVRELRMLTPSIVP------TNIVFMGMGEPLMNWKAVSPTL 178 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKK 251 ++ D G+ R +T+ST GV+P + L LAIS+HAP+D +R ++P+N K Sbjct: 179 SLLNDPRALGIGARHITISTVGVLPGIVALAARPEQFRLAISIHAPSDALRRTLMPVNTK 238 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + +AA R + RVT EYVML VND EHA QLA+L +D +NLIP Sbjct: 239 YPLADVIAAAREF-------DRRVTFEYVMLGGVNDQPEHAAQLAQLARDCRAFVNLIPL 291 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 +P + S+ I+ F+K + + G T VR++RG DI AACGQL + + R + + Sbjct: 292 HPGGSMGFSPSTTPTINAFAKAIRARGVETAVRRSRGLDIAAACGQLRTERLGR-RLPVA 350 Query: 372 KRMQGEA 378 + GE Sbjct: 351 AQDHGEV 357 >UniRef50_B2A0B9 Ribosomal RNA large subunit methyltransferase N 3 n=6 Tax=Verrucomicrobia RepID=RLMN3_OPITP Length = 374 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 124/367 (33%), Positives = 200/367 (54%), Gaps = 16/367 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 K L + + ++ GE FRA Q++ W+Y ++D MT++ K LR L + Sbjct: 4 TPAKPPLTGETLESLTARLRERGEPAFRASQILDWVYKKRARSWDGMTNLPKPLRTWLDD 63 Query: 74 VAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIP--------EDDRATLCVSSQVG 124 ++ +V ++S+D T K + + D +ETV I + R T+C+S+QVG Sbjct: 64 TFDLMPATLVLNKQSADVTDKLLLELRDGSLIETVIIRAPQEGVGQDHSRKTICISTQVG 123 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI---TNVVMMGMGEP 181 CA+ C FC++ G R+L EI+ Q+ + A + N+V+MGMGEP Sbjct: 124 CAMGCVFCASGLAGLKRDLSAGEIVAQLLQVCYREDALTPRAHMELASFDNIVVMGMGEP 183 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDE 240 L N + ++ A+ I+ D+G G RR+T+STSG+VP + +L D LAISLH DE Sbjct: 184 LANYDALIRALTILNADWGLGFGARRITVSTSGLVPKILQLADEPLGFRLAISLHGATDE 243 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 +R++I+P+NK + + L AV+ + EK +T+E++++D VND E A +L ++ Sbjct: 244 VREKIMPVNKAFPLAKLLPAVKAFSEKHGR---MITLEFILIDGVNDSLEQAEKLRDIAL 300 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 D +NLIP+N G + R S +R +RF+ VL + + +R+ +G DIDAACGQL Sbjct: 301 DLHAHVNLIPYNTVEGLAWKRPSITRQERFADVLRARRVSVTLRREKGHDIDAACGQLRL 360 Query: 361 DVIDRTK 367 + Sbjct: 361 KTEKERQ 367 >UniRef50_B9E1E5 Putative uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E1E5_CLOK1 Length = 362 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 127/360 (35%), Positives = 205/360 (56%), Gaps = 15/360 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+L+ N +++ + K E FRA Q+M W+Y +F+ MT+I+K + KLK+ I Sbjct: 6 NILNFNIEELENWMKVNDESKFRASQIMDWIYKKNQYDFNYMTNISKNVIEKLKKNFYIG 65 Query: 79 APEVVEEQRS-SDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 PE++E+Q+S S T K+ D +ETV + ++CVS+QVGC + CKFC++ Sbjct: 66 IPELIEKQKSKSQDTFKFLYKFQDKNIIETVVMKYRHGNSICVSTQVGCRMGCKFCASTV 125 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL EI+ Q+ ++ + I+N+V+MG GEPL N +NV+ + ++ Sbjct: 126 NGMVRNLTSGEILAQILKSQTEIN-------ERISNIVLMGSGEPLDNYDNVLKFLNMVN 178 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 + + +R +TLST G+VP + L + + + LAISLH+P++ R +++PI KY+IE Sbjct: 179 SKYSLNIGQRHITLSTCGIVPKIMDLANENLQITLAISLHSPDNFSRRDMMPIANKYSIE 238 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + A + Y+ K+ RV+ EY ++ VND E A +L +LLK C +NLIP N Sbjct: 239 EIIYACKYYINKTGR---RVSFEYALVKGVNDSLEFAERLVQLLKGLLCHVNLIPVNEVK 295 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQ 375 + +SS I +F L+ T +R+ G DIDAACGQL ++ ++ RK ++ Sbjct: 296 ENDFKKSSEDNIKKFYNKLIENKIETTIRREMGSDIDAACGQLRRRYLE--SKSYRKGVE 353 >UniRef50_Q2J713 Ribosomal RNA large subunit methyltransferase N n=137 Tax=Bacteria RepID=RLMN_FRASC Length = 421 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 146/369 (39%), Positives = 204/369 (55%), Gaps = 11/369 (2%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC--CDNFDEMTDINKVLRGKLKE 73 +L DL RQ+ R+ LG+ FRADQV + Y D + MTD+ + R L + Sbjct: 34 APRHLADLTRQERRDVAVSLGQPAFRADQVARHYYARLIAADEPEAMTDLPERDRQPLLD 93 Query: 74 VAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKF 131 R V DG T K A D +E+V + DRAT+CVSSQ GC + C F Sbjct: 94 ALLPRLLVPVRTLSCDDGLTRKTAWRTVDGASLESVIMRYPDRATVCVSSQAGCGMGCPF 153 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR-PITNVVMMGMGEPLLNLNNVVP 190 C+T Q G RNL +EI+ QV AA+++ ++ G ++NVV MGMGEPL N V+ Sbjct: 154 CATGQGGLTRNLSTAEIVEQVVHAARVLRRRELAGGETRLSNVVFMGMGEPLANYAAVIA 213 Query: 191 AMEIMLD--DFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVP 247 A+ + G GLS R +T+ST G+VPA+ +L + + V LA+SLHAP+D +R+E+VP Sbjct: 214 ALRRLTAHPPEGLGLSARGLTVSTVGLVPAIRRLAGEGLPVTLAVSLHAPDDVLRNELVP 273 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 IN ++ + LAA Y E + RV++EY ++D VND A LA+LL +N Sbjct: 274 INTRWPVVEVLAAAWEYAEVTGR---RVSVEYALIDGVNDDVGRADALADLLVGRLAHVN 330 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 LIP NP G+ + S+ + F + L G T VR TRG +I AACGQLA + + + Sbjct: 331 LIPLNPTGGSSWRASAPAGQRAFVRRLRDRGIVTTVRDTRGREIAAACGQLAAEPAGKPE 390 Query: 368 RTLRKRMQG 376 RT R G Sbjct: 391 RTDRPEQVG 399 >UniRef50_B9CLR1 Radical SAM enzyme, Cfr family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLR1_9ACTN Length = 361 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 111/348 (31%), Positives = 181/348 (52%), Gaps = 12/348 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K L L+ ++ E ++LG+ FRA Q+ WM+ +FD+M+++ K LR L + Sbjct: 21 KRGLKTLSHAEIVELVENLGQPKFRAKQLEDWMWSKGATSFDQMSNLPKSLRAGLAKTVS 80 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 ++ V Q S DG+ K+ + D VE V +P ++ +C S+Q GCA+ C FC+T Sbjct: 81 FQSITQVTRQLSQDGSRKYLLQYPDNVCVECVGMPTGNKLAVCASTQAGCAMGCAFCATG 140 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G R+L SEI QV + +++VV MG GEP +N +N + A+ ++ Sbjct: 141 AAGLTRSLSASEIYDQVLHIRNDF-------EMRVSSVVFMGQGEPFMNYDNALEALRLL 193 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNI 254 G G+ R +T+ST GV+P + + + LA+SLH+ + RD ++P +KY++ Sbjct: 194 NSPHGLGIGARHLTISTCGVIPMIKRFANEPEQFTLAVSLHSAVQKTRDILMPGVRKYSL 253 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + Y+EK+ R T EY ++ +ND L + + T +NLI N Sbjct: 254 LHLYDIMGEYVEKTGR---RPTYEYALIGGINDSENELGALRDFCRGTLAHVNLIQLNEI 310 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 PG+ + S+ +R +F L G +R +RG DIDAACGQL+ + Sbjct: 311 PGSKFHPSTPARAQQFVTKLGEVGVEATIRISRGADIDAACGQLSQKL 358 >UniRef50_C0BG68 Radical SAM enzyme, Cfr family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG68_9BACT Length = 358 Score = 429 bits (1104), Expect = e-119, Method: Composition-based stats. Identities = 131/348 (37%), Positives = 204/348 (58%), Gaps = 8/348 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L++++++EFF G F+ QV +W++ +F+ MT+++ R L E Sbjct: 14 KKDIRALSKEELQEFFVSQGAPSFKGGQVYQWLWQKGVHDFELMTNLSLTHRNLLDAHFE 73 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I+ + +QRS+DGTIK A+ + D V E+V IP R T CVSSQVGC+L+C FC+TA Sbjct: 74 IKHINIDFQQRSTDGTIKNAVKLHDNLVVESVLIPTSTRTTACVSSQVGCSLDCTFCATA 133 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 RNL EI QV + +K+ QRP++N+V MGMGEPL+N NNV+ A+E + Sbjct: 134 ALKRMRNLNADEIYDQVVAMDQ---QSKLYHQRPLSNIVFMGMGEPLMNYNNVLAAIEKI 190 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D G+S RR+TLSTSG+ + K+ D + LA+SLH+ E+R+ I+P KK+ + Sbjct: 191 TDTEALGMSPRRITLSTSGIPKLIRKMADDKVKFGLAVSLHSARQEVRERIMPFAKKFPL 250 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + ++ + + + ++T EYV+ + VND E L L + P K+N+I +NP Sbjct: 251 TELIESLEYWYAYT---KKQITFEYVVWEGVNDLKEDIQALVGLCRRIPSKVNIIQYNPI 307 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 G+ + + + ID + L + R++RG DIDAACGQLA + Sbjct: 308 DGSSMKQGNQTVIDAYIAALTKARISVTYRRSRGVDIDAACGQLANKI 355 >UniRef50_O66732 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Aquificales RepID=RLMN_AQUAE Length = 348 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 137/359 (38%), Positives = 207/359 (57%), Gaps = 22/359 (6%) Query: 22 DLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPE 81 + +++++ F +LG +P+RA QV +W+Y +F++MTD+ K R LKE E Sbjct: 6 NYTLEELKKRFTELGLEPYRAKQVFRWVYKKFVTDFEKMTDLGKKHRELLKEHFAFHPLE 65 Query: 82 VVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 ++ + D +K+ D + ETV I E D TLCVSSQ+GCA+ C FC+TA G Sbjct: 66 KLDRVEAPDA-VKYLFKTKDGHILETVLIKERDHYTLCVSSQIGCAVGCTFCATALDGLK 124 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 RNL +EII Q + + + G+ I NVV MGMGEPL N NV A+EIM+ G Sbjct: 125 RNLSTAEIIDQYLQVQQDL------GEEKIRNVVFMGMGEPLANYENVRKAVEIMVSPEG 178 Query: 201 FGLSKRRVTLSTSGVVPALDKLGDMI---DVALAISLHAPNDEIRDEIVPINKKYNIETF 257 LSKRR+T+STSG+V + ++ +V LA+SL+A + + R+E++P+ K +E Sbjct: 179 LDLSKRRITISTSGIVAQIKRMAQDPVMKEVNLAVSLNAVSQKKREELMPLTKTNTLEEL 238 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KDTPCKINLIPWNPFP 315 + ++ Y R+T+EYV++ VND A +LA+L+ K+NLIP+NP P Sbjct: 239 MEVLKNYPLP---KYRRITLEYVLIKGVNDSPNDAERLAKLIGRHKKKFKVNLIPFNPDP 295 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRM 374 PY R + + I +F KVL YG + VR ++G ++ ACGQL RT+R +R+ Sbjct: 296 NLPYERPALTDIMKFQKVLWKYGISNFVRFSKGVEVFGACGQL------RTQRLQLQRV 348 >UniRef50_O80746 T13D8.12 protein n=9 Tax=Spermatophyta RepID=O80746_ARATH Length = 454 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 139/348 (39%), Positives = 209/348 (60%), Gaps = 10/348 (2%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHY--CCDNFDEMTDINKVLRGKLK 72 + K+ L + ++E+ + G +P +A + K +Y +N DE+ +NK L+ + Sbjct: 88 NQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMIS 147 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIP-EDDRATLCVSSQVGCALECK 130 E AE A + + +SDGT K + D +ETV IP + R T+CVSSQVGCA+ C+ Sbjct: 148 EHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQ 207 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC T + G RNL +EI+ Q A +++ + ITNVV MGMGEP N++NV+ Sbjct: 208 FCYTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGS----ITNVVFMGMGEPFHNIDNVIK 263 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINK 250 A IM+D+ G S R+VT+STSG+VP L + + ALA+SL+A DE+R+ I+PIN+ Sbjct: 264 AANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINR 323 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 KY + L +R L S+ ++ +V EYVML VND + A +L EL++ PCKINLI Sbjct: 324 KYKLSLLLETLREGL--SSRHKYKVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQ 381 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +NP G+ + ++ ++ +F VL G T ++R +RG+D AACGQL Sbjct: 382 FNPHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQL 429 >UniRef50_C8WPW3 Radical SAM enzyme, Cfr family n=3 Tax=Coriobacteriaceae RepID=C8WPW3_EGGLE Length = 353 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 14/348 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ + ++ K+LG+ FRA Q+ +W+Y ++DEMT++ LR L E + Sbjct: 12 SIKTYSLPELASVMKELGQPAFRAQQLQEWLYQRHASSYDEMTNLPGSLRATLAERFPLT 71 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPE--DDRATLCVSSQVGCALECKFCSTA 135 P VV+ Q S DGT K+ + D RVETV IP DR T+C S+Q GC + C FC+T Sbjct: 72 MPTVVDRQISKDGTRKYLVEFDDGIRVETVGIPSRNGDRLTVCFSTQAGCPIACAFCATG 131 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q+GF RNL EI+ QV + +G + +TN V MG GEP LN +N + A+ I+ Sbjct: 132 QEGFARNLIPGEIVDQVLIVQEDMG-------KRVTNAVGMGQGEPFLNYDNTMAALRIL 184 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 G + R +++ST G++P L++ G+ LA+SLHA IRD I+P +Y + Sbjct: 185 NHKKGLEIGARHISVSTCGILPGLERFSGEPEQFTLAVSLHAARQPIRDLIMPNVARYKL 244 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + A++ Y+ K+N R+T+EY+M++ VND L + + C +NLIP N Sbjct: 245 PSLKEALQNYVAKTNR---RITLEYIMIEGVNDAPVDLKALQKFCSNLLCHVNLIPINAI 301 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 G+ + SS I+ + + G +R +RG DI ACGQL Sbjct: 302 EGSEFQPSSPETINLWLSEISKKGTEATLRDSRGSDISGACGQLKNTF 349 >UniRef50_Q11QF0 Ribosomal RNA large subunit methyltransferase N n=32 Tax=Bacteroidetes RepID=RLMN_CYTH3 Length = 365 Score = 426 bits (1095), Expect = e-118, Method: Composition-based stats. Identities = 139/358 (38%), Positives = 217/358 (60%), Gaps = 8/358 (2%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 + +T+ K + L+ +++++FF GEK FR+ QV +W++ +F++MT+++K R Sbjct: 14 QTTSTEIKKKCIRSLSAEELKDFFVASGEKAFRSRQVYEWLWKRSARSFEQMTNLSKETR 73 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCAL 127 L+ I + ++Q S+DGTIK+ + D VE V IP DDR T C+SSQVGC+L Sbjct: 74 TLLENNFSINPVTISQKQVSTDGTIKFGFKLHDGYLVEGVLIPADDRMTACISSQVGCSL 133 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 CKFC+T RNL EI QV + AA+ Q P+TN+V+MGMGEPLLN N Sbjct: 134 TCKFCATGYMDRKRNLEPYEIYDQVVLIKE---AAEEHYQTPLTNIVLMGMGEPLLNYTN 190 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIV 246 V+ ++ + + G ++ +R+TLST+G+ + KLGD + LA+SLHA ND R+ I+ Sbjct: 191 VLKGIDKVTSEEGLHIASKRITLSTAGIAKMITKLGDEKVKFRLALSLHAANDVKRNTIM 250 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 PIN+ N+ ++ + +++ ++ VT EY++ D VND + A +L K+ PCKI Sbjct: 251 PINETNNLNVLKESLLHFCKETGSS---VTFEYIVFDGVNDTAQDAKELYAFAKNIPCKI 307 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 N+I +NP A + +S ++++F KVL G +R++RG DIDAACGQLA + Sbjct: 308 NIIEYNPIQEADFMNTSVDKLEQFKKVLTDKGIIVNIRRSRGKDIDAACGQLAIKEVK 365 >UniRef50_D0RN88 Radical SAM enzyme, Cfr family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN88_9RICK Length = 357 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 142/361 (39%), Positives = 215/361 (59%), Gaps = 11/361 (3%) Query: 18 INLLDLNRQQMREFFK-----DLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 I DLN ++++ F D + RA+QV K+ Y + + +++ + LR +L Sbjct: 2 IEFADLNYREVKSIFSNNFNLDKKKSSMRANQVWKFYYQKGYSDPNLFSNLTQSLRDELL 61 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKF 131 ++ P++ +Q S DGTIKW + + D VETVYIP + +TLC+SSQVGC L CKF Sbjct: 62 KIVNFSRPKIKNKQVSKDGTIKWLLELNDKNLVETVYIPSETHSTLCISSQVGCTLNCKF 121 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C T Q +NL +EII Q+ A + K Q+ I N+V MGMGEP N N+ + Sbjct: 122 CHTGIQPLVKNLSSNEIISQILIAKDELNDWKE--QKKINNIVYMGMGEPFYNFENIKKS 179 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 +EI+ D+ G S +++T+STSG+ P + K + I LA+SLHAPN+EIR+EI+PINKK Sbjct: 180 VEILKDENGLNFSNKKITVSTSGISPNIKKAANEIGTYLALSLHAPNNEIRNEIMPINKK 239 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 YNIE + +Y +++ ++ IEYV+L VND + A +L++++ PCK+NLI + Sbjct: 240 YNIENIIEHCSQYAKENG---EKIFIEYVLLKDVNDTEQCAKELSKIMSQFPCKLNLIQF 296 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 NP+PG Y ++ + +F +++ G +RK+RGDDI ACGQL + TL Sbjct: 297 NPWPGVKYKTATKEQTSKFIEIIKKNGHVVTLRKSRGDDILGACGQLKTASEREKRSTLS 356 Query: 372 K 372 K Sbjct: 357 K 357 >UniRef50_Q2JMN2 Ribosomal RNA large subunit methyltransferase N n=47 Tax=cellular organisms RepID=RLMN_SYNJB Length = 352 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 124/354 (35%), Positives = 191/354 (53%), Gaps = 20/354 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 I LL + ++++ G+ +R Q+ W+Y + +++T + R ++ + Sbjct: 6 IPLLGQSLSALKDWAVAQGQPAYRGQQLHAWIYQKGIRSLEQVTVFPRAWREAVQS-YPV 64 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 +V+ + DGT+K+ + + D +ETV IP R T+CVSSQVGC + C FC+T + Sbjct: 65 GRSRIVQRTEARDGTVKFLLGLADGQLIETVGIPTAKRLTVCVSSQVGCPMACDFCATGK 124 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G+ RNL + EI+ QV + G R +++VV MGMGEPLLN + VV A+ + Sbjct: 125 MGYRRNLELHEILDQVLTVQEDFG-------RRVSHVVFMGMGEPLLNRDTVVQAIRSLN 177 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D G+ +R +TLST GV + L + V LA+SLHAPN ++R ++P Y ++ Sbjct: 178 QD--IGIGQRHITLSTVGVPRQIAWLAQQDLQVTLAVSLHAPNQDLRQRLIPSASHYPLD 235 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL-----KDTPCKINLIP 310 T + R Y+ ++ RV+ EY +L VND HA QLA+LL +NLIP Sbjct: 236 TLIQDCRDYMLRTGR---RVSFEYTLLSGVNDLPIHARQLAQLLQQASRSGVQLHVNLIP 292 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NP A Y R +R+ F + L + VR+TRG D +AACGQL G + Sbjct: 293 YNPISEADYQRPHPTRVREFVRQLEQHQVRATVRQTRGLDGNAACGQLRGSFLR 346 >UniRef50_B2J6D0 Ribosomal RNA large subunit methyltransferase N n=18 Tax=cellular organisms RepID=RLMN_NOSP7 Length = 364 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 120/352 (34%), Positives = 192/352 (54%), Gaps = 23/352 (6%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 LL + ++ + + G+ +R Q+ +W+Y + +++ +K R ++ E+ I Sbjct: 24 LLGASVAELSAWVQQQGQPAYRGKQLHEWIYDKGVRSLADISVFSKQWRAEVAEI-PIGR 82 Query: 80 PEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDD--------RATLCVSSQVGCALECK 130 + + DGT+K+ + + D ++ ETV IP R T+CVS+QVGC + C Sbjct: 83 STLHYRSVAPDGTVKYLLRLTDGQIIETVGIPTFAERGEGPKARLTVCVSTQVGCPMACD 142 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+T + G+ RNL EII QV + Q+ ++NVV MG+GEPLLN NV+ Sbjct: 143 FCATGKGGYKRNLARHEIIDQVLTVQEDF-------QQRVSNVVFMGLGEPLLNTENVLA 195 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPIN 249 A++ + D G+ +R +T+ST G+ + + + + LA+SLHAPN +R++++P Sbjct: 196 ALKSLNQD--IGIGQRSLTVSTVGIRDRIRQFAQNNLQITLAVSLHAPNQALREKLIPSA 253 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 + Y +E LA R Y+E + RVT EYV+L VND EHA +L++ ++ +NLI Sbjct: 254 RAYPLEELLAECREYVEITGR---RVTFEYVLLAGVNDLPEHALELSKCMRGFQSHVNLI 310 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P+NP Y R + RI+ F VL VR +RG + DAACGQL Sbjct: 311 PYNPIQEVDYKRPNRDRIEAFVNVLKQQNTAVSVRYSRGLEADAACGQLRAS 362 >UniRef50_A9A3L9 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=RLMN_NITMS Length = 351 Score = 423 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 201/356 (56%), Gaps = 19/356 (5%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV-AEI 77 +L L ++M + D+G +RADQ++ +Y+ + +++ + K LR + E I Sbjct: 3 DLYRLLPEEMEKLVIDMGYDRYRADQILLPLYYKFPKDINDIPQLPKKLREEFTEAGYTI 62 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPE-------DDRATLCVSSQVGCALE 128 + + + S DG T K + + D VETV + R+T+CVS+Q+GCA+ Sbjct: 63 GSAKEIHRVVSDDGDTTKLLLELSDGSSVETVLMQYEPTKIGGHPRSTICVSTQIGCAMG 122 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 C FC+T Q GF NL+ I+ QV A+++ +TN+V MGMGEP+ N + + Sbjct: 123 CVFCATGQMGFETNLKAEHIVSQVIHFAELLEQR----GEHVTNLVFMGMGEPMANYDEM 178 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVP 247 + A++I+ D GFGL +R +T+ST G+ ++KL + + + LAISLHAPN+E+R ++VP Sbjct: 179 IRAVKILTHDRGFGLGQRHITISTIGITSGIEKLAEENLQIGLAISLHAPNNELRKKLVP 238 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 ++E + + R Y +K+ RVT EY +++ VND E AH+LA LL+ +N Sbjct: 239 TAGPNSVEDIIKSGRDYFKKTGR---RVTFEYALMEGVNDSPEIAHELARLLRGNGSHVN 295 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 +IP NP G + R S + F ++L G VR +G +I AACGQL D++ Sbjct: 296 IIPINPTAG-DFKRPSEKNVLEFEQILRKSGVNCTVRVEKGTEISAACGQLRTDIV 350 >UniRef50_Q8RFZ9 Ribosomal RNA large subunit methyltransferase N n=15 Tax=Fusobacterium RepID=RLMN_FUSNN Length = 358 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 135/356 (37%), Positives = 209/356 (58%), Gaps = 17/356 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 K+ KIN+L+L ++++ E LG K F +V W++ +FDEMT+++ R LKE Sbjct: 2 KNEKINILNLTQEELTELLVSLGLKKFYGKEVFIWLHKKITRSFDEMTNLSLKDREILKE 61 Query: 74 VAEIRAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIPEDD------RATLCVSSQVGC 125 I +++ Q S D T K+ + D +ETV + D R TLCVSSQVGC Sbjct: 62 KTYIPFFNLLKYQVSKIDKTEKFLFELEDGGTIETVLLRHKDSKNKEIRNTLCVSSQVGC 121 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 ++C FC+T Q G+ RNL VSEI+ Q++ + + + N+V MGMGEPLLN+ Sbjct: 122 PVKCSFCATGQSGYMRNLSVSEILNQIYTVERRLRKK----GENLNNLVFMGMGEPLLNI 177 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDK-LGDMIDVALAISLHAPNDEIRDE 244 +N+ A+ I+ ++ G +SKR++T+STSGVV ++K L D I + LAISLH+ +E RD+ Sbjct: 178 DNLSKALSIISNENGINISKRKITISTSGVVSGIEKILLDKIPIELAISLHSAINEKRDK 237 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 I+PINK + +E A + Y +++ R+T EY+++D+ N A+ LA+ + Sbjct: 238 IIPINKNFPLEDLSAVLIEYQKQTKR---RITFEYILIDNFNISETDANALADFIHQFDH 294 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDAACGQLA 359 +NLIP+N GA + R S +I++F L + +R+ +G DID ACGQL Sbjct: 295 VVNLIPYNEVEGAEHTRPSVKKINKFYIYLKNVRKVNVTLRQEKGSDIDGACGQLR 350 >UniRef50_A8DJI2 Radical SAM enzyme Cfr family protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI2_9BACT Length = 363 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 126/358 (35%), Positives = 186/358 (51%), Gaps = 9/358 (2%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 + T ++L QQM + G +R Q+ + ++ + +E++ + + +R Sbjct: 3 SAATVAANQDMLGQTCQQMCALMAERGLPAYRGRQLFQALHRQLVETPEEISVLPRAVRT 62 Query: 70 KLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALE 128 +L A ++ + S DGT ++ V D +ETV+IP+ R TLC+SSQ GC + Sbjct: 63 ELAAEASLQPLSLAGIFESLDGTRRYLFKVHDGYSIETVWIPDRGRVTLCLSSQAGCPMR 122 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 C FC+TA G RNL EI+ QV + + + N+V+MGMGEPLLN ++V Sbjct: 123 CAFCATATLGLQRNLTAGEIVAQVLYVLRDTVRQRQQPRPAAVNLVLMGMGEPLLNYDHV 182 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVP 247 + A+ ++ D G + RRVTLST G+VP + LG D LA+SL A DE+R ++P Sbjct: 183 LHALRVLADPEGLHIVPRRVTLSTVGIVPRIIALGREPDRPRLAVSLTAATDELRARLMP 242 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---- 303 +N Y +E A + R+T EYV+LD VND + A L L Sbjct: 243 VNLTYPLEALREACLAFPRHPG---ERITFEYVLLDGVNDSEDQARALLRWLAPLRAQEA 299 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 K+NLIP NP PG P+ R+ RF +L + G T +R+ RG DI AACG LA Sbjct: 300 AKVNLIPHNPVPGIPFRPPKLERVLRFQALLRAKGLPTYLRRPRGQDISAACGMLAAT 357 >UniRef50_B2RMI0 Ribosomal RNA large subunit methyltransferase N n=36 Tax=Bacteroidales RepID=RLMN_PORG3 Length = 352 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 131/362 (36%), Positives = 208/362 (57%), Gaps = 14/362 (3%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 + T + K+ LL ++ +++ +G F Q+ +W+Y +F EMT+I++ R Sbjct: 2 KQQTETEKKVVLLGMSLEELTTVALRMGMPRFAGKQLAEWIYVRRATDFAEMTNISQANR 61 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCAL 127 KL E+ ++ + Q S DGT K+ VG+ R VE+V IPE DRATLC+SSQVGC + Sbjct: 62 QKLAEIYDLGRYPWSDVQCSVDGTKKYLFPVGEGRFVESVLIPEGDRATLCISSQVGCKM 121 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 +C FC T +QG+N NL +EI+ Q++ V +TN+V MGMGEPL N + Sbjct: 122 DCLFCMTGKQGWNGNLSAAEILNQIF---------SVDEAAELTNLVYMGMGEPLDNTDE 172 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVP 247 V+ ++E + + +G G S +R+T+ST G L++ LA+SLH+P E R +++P Sbjct: 173 VLRSIEALTEPWGMGWSPKRITVSTIG-AKGLERFLAESRCHLAVSLHSPFPEERRKLMP 231 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 K + I L +R Y + Q RV+ EY++ D +ND HA +LA +L+ PC+IN Sbjct: 232 GEKAFPIMQTLDRIRAY---DFSGQRRVSFEYIVFDGLNDDMRHADELAAILRGIPCRIN 288 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 LI ++ P S +R++ F K + S+G+T +R +RG+DI AACG L+ + ++ Sbjct: 289 LIRFHKIPAVSLRSSDTARMEAFRKRMESHGYTCTIRASRGEDIFAACGMLSTSKAESSE 348 Query: 368 RT 369 Sbjct: 349 EK 350 >UniRef50_C7RGU3 Radical SAM enzyme, Cfr family n=5 Tax=Anaerococcus RepID=C7RGU3_ANAPD Length = 341 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 130/351 (37%), Positives = 198/351 (56%), Gaps = 14/351 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K L D + +++ E F G + FRA QV + ++ ++F M+D++K +R KL E + Sbjct: 2 KDKLNDKSIKELEEIFTKEGYQKFRAKQVYRQIHVNKVNDFKLMSDLSKDMREKLSEKYD 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 +V +E S D T K+ ++ D + E V++ D R T+C+SSQVGC + CKFC++ Sbjct: 62 FPKMKVEKEFVSELDSTKKYLFSLADGNIIEAVFMDYDKRKTICISSQVGCRMGCKFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + G RNL E+I +V+ ++ G I N+V+MG+GEPL N N+ +EI Sbjct: 122 TKNGRERNLSAGELIEEVYALERLNGD--------INNIVIMGIGEPLDNYENIRKFIEI 173 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 + D+ G LS R +TLSTSG+ P + KL D +DV LA+SLH +D+ R + +PI KY+ Sbjct: 174 ITDEKGRNLSHRSITLSTSGLSPMIRKLADSGLDVNLAVSLHYADDDKRRKFMPIANKYS 233 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 IE+ + A YL+++ RV+ EYV++D VN+ L LLK INLIP NP Sbjct: 234 IESLMEATDYYLDRTKR---RVSFEYVVIDGVNNLDSDVSNLTSLLKGKNVHINLIPLNP 290 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 Y R ++ + F L+ +RK+ G DIDA+CGQL + Sbjct: 291 IEEFSYDRPKSTALRDFRDKLLKKKLNATIRKSMGSDIDASCGQLRNNYAR 341 >UniRef50_B3QS43 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RLMN_CHLT3 Length = 369 Score = 420 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 126/355 (35%), Positives = 198/355 (55%), Gaps = 15/355 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 + K ++ L+ + + G+ FRA Q+ W+Y + +F +M +++ + L + Sbjct: 2 NEVKHDIKALSLEALMALINSYGQPAFRAKQIFHWIYAHGVTDFAQMKNLSASFQTLLSQ 61 Query: 74 VAEIRAPEVVEEQRS----SDGTIKWAIAVGDQ-RVETVYIPEDD--RATLCVSSQVGCA 126 + + + + S + T+K+ + D+ +E+V+IP D R TLC+SSQVGCA Sbjct: 62 HFTVSSIQPHADTVSHEITPEQTVKFLFRLSDEQSIESVFIPSDSTSRNTLCISSQVGCA 121 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 CKFC+T GF RNL + EI+ QV + +G + ITNVV MGMGEPL N + Sbjct: 122 FACKFCATGYMGFIRNLTIGEILDQVLWVNRWLGDQRGG---KITNVVFMGMGEPLANFD 178 Query: 187 NVVPAMEIMLDDFG-FGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDE 244 N + A+ I+ + F +S R++T+ST G +P + +L D I+ LAISLH+ + IR+E Sbjct: 179 NCLAAIRILTNPDYAFQISTRKITVSTVGFIPGIQRLIDTGINCKLAISLHSAHQAIREE 238 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++PI K+Y++ T A + RY + A + +T EY ++ +ND + A L++ K C Sbjct: 239 LIPIAKEYSLATLKAILTRYNQ---AYKQPITFEYSLIHKINDSEQDAILLSKFCKGINC 295 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 KINLI +N Y S F + + +G T VRK+RG DI AACGQLA Sbjct: 296 KINLIDYNSVDNIDYLPSPEGHKQAFIRKCIEHGLTVTVRKSRGADIQAACGQLA 350 >UniRef50_D1B6H8 Radical SAM enzyme, Cfr family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6H8_THEAS Length = 462 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 132/348 (37%), Positives = 191/348 (54%), Gaps = 13/348 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K++ L L+ + + LGEK FRADQV W Y F M+D++ LR +L Sbjct: 3 KMDALSLSYEDWVREMEALGEKRFRADQVCGWFYRRHVFEFQLMSDLSLELRNRLDGAFR 62 Query: 77 IRAPEVVEEQRS-SDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + P+++ + S DGT K+ VE+V I R T CVS+QVGC L C FC+T Sbjct: 63 VGLPKMLGMRASGRDGTKKFLFDFDGSSVESVAIWHPGRITACVSTQVGCPLGCPFCATG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q GF RN+ V E++GQ +G I N+V MGMGEP+LN +N++ A+ + Sbjct: 123 QSGFERNMTVGEMVGQFLAMEARLG--------EIKNLVFMGMGEPMLNYHNLIGAIRNL 174 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 GL R +T+STSG++P + L + + V LA+SLHAPNDE+RD++VPIN +Y + Sbjct: 175 NHPKMRGLGIRHITVSTSGIIPGILNLAREGLGVRLAVSLHAPNDELRDQLVPINAQYPL 234 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + A+ Y E + R+TIEY + D VND A QL E LK +NLIP + Sbjct: 235 KELKRALMEYQEITG---DRITIEYSLFDQVNDSVPMARQLGEYLKGLSAFVNLIPGSCV 291 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 + S R+ F +L + G+ +R+++G D+ ACGQL V Sbjct: 292 GDQRFRPSPPFRVRAFGDLLTAMGYPVAMRQSKGSDVGGACGQLRRQV 339 >UniRef50_A4SEQ5 Ribosomal RNA large subunit methyltransferase N n=10 Tax=Chlorobiaceae RepID=RLMN_PROVI Length = 373 Score = 419 bits (1077), Expect = e-116, Method: Composition-based stats. Identities = 130/378 (34%), Positives = 202/378 (53%), Gaps = 14/378 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M + + T N+ DL QQ+ ++ E +RA Q+ +W++ + ++F+EM Sbjct: 1 MRSPQTSEKTHTMAKTLQNITDLTLQQLTGRLAEMKEPAWRAKQIHEWLFSHRAESFEEM 60 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDG-----TIKWAIAVGDQ-RVETVYIPEDDR 114 T ++K LR L+E I PEV + S++G T K + + D +ETV IP R Sbjct: 61 TTLSKALRKALEETFAITPPEVEQHDNSTEGACPGPTEKLLLRLPDGAMIETVLIPGPGR 120 Query: 115 ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 T C+SSQ GCAL+C FC+T GF RNL EI GQ ++ A+ ++ ITN+V Sbjct: 121 LTACLSSQAGCALQCSFCATGSLGFKRNLTPGEITGQANALNSMLAAS--GREQKITNIV 178 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFG-FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAI 232 MGMGEPLLN NV A+E + +S+R++T+ST G++P + KL + LA+ Sbjct: 179 FMGMGEPLLNTLNVFDAVETLSTRGYTSSISQRKITISTVGIIPEIAKLATSGMKTKLAV 238 Query: 233 SLHAPNDEIRDEIVPIN-KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 SLH+ E R+ ++P+ ++Y ++ + Y + + VT+ Y++L+ VND E Sbjct: 239 SLHSAFQEKRESLMPLAARRYPLDELQPVLAHYAKNTGEP---VTLVYMLLEGVNDTLED 295 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI 351 A QL CKINLI +N P+ + DRF L+ G +RK+ G I Sbjct: 296 ARQLIRFASRFFCKINLIDYNSIVNIPFQSVCSETRDRFRDRLLEAGLQVTLRKSYGTSI 355 Query: 352 DAACGQLAGDVIDRTKRT 369 AACGQLA ++ + ++ Sbjct: 356 HAACGQLAAKGMEHSNKS 373 >UniRef50_A9S1C9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S1C9_PHYPA Length = 433 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 145/375 (38%), Positives = 215/375 (57%), Gaps = 12/375 (3%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYH--YCCDNFDEMTDINKVL 67 K++L D+ ++ + + G K RA + + +Y ++ + +NK Sbjct: 65 AAGRAPRKVSLKDMTFPELERWVESHGHKASRAAMLWRHLYGNGKWVESPAVIPRLNKEF 124 Query: 68 RGKLKEVAEI-RAPEVVEEQRSSDGTIKWAIAVGD--QRVETVYIPED-DRATLCVSSQV 123 L+E AE ++ + + DGT K + + VETV IP R T+CVSSQ+ Sbjct: 125 VSLLEERAEFAPNLQLRDVHTARDGTRKLVFFLEEYGASVETVVIPGPRGRVTVCVSSQI 184 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCA+ C+FC TA+ G NL ++I+ Q+ A++IV +TNVV MGMGEPL Sbjct: 185 GCAMNCQFCFTAKMGLRGNLSTAQIVEQLVVASRIVSKDLGH----VTNVVFMGMGEPLH 240 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRD 243 N+++V+ A EIM++D G LS R+VT+STSG+VP + K + ALA+SL+A D+IRD Sbjct: 241 NIDSVIRAAEIMVNDKGLHLSPRKVTISTSGLVPQIRKFCRSSECALAVSLNATTDDIRD 300 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP 303 +I+PIN+KYNI T L V+ + ++ V +EYVML +VND E A +L EL+KD P Sbjct: 301 QIMPINRKYNIRTLLDCVKEEM-ITHRPGESVFLEYVMLKNVNDSEEDATRLIELVKDIP 359 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 CKINLI +N PG+ + + + RF + G +R +RGDD ACGQL G V+ Sbjct: 360 CKINLIMFNSHPGSAFEPTPLVEVLRFRDRVADAGLVVHIRNSRGDDEKMACGQL-GTVL 418 Query: 364 DRTKRTLRKRMQGEA 378 R+ R ++ MQ A Sbjct: 419 PRSPRRRKQEMQEPA 433 >UniRef50_C9LG49 Radical SAM enzyme, Cfr family n=16 Tax=Bacteria RepID=C9LG49_9BACT Length = 360 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 122/358 (34%), Positives = 195/358 (54%), Gaps = 17/358 (4%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + K NLL L ++++ + L F Q+ +W+Y + DEMT+++ R Sbjct: 1 MADYQQKKNLLGLTPSELKDVARSLQLPAFVGKQIARWLYVHHVREIDEMTNLSLAAREL 60 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIA-VGDQRVETVYIPEDDRATLCVSSQVGCALEC 129 LK+ I ++ Q S DGTIK+ + +ETV+IP+ DR TLCVSSQVGC + C Sbjct: 61 LKQQYVIGNSSPIDAQYSKDGTIKYLYRTLSGDYIETVFIPDGDRGTLCVSSQVGCKMHC 120 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC T +QG+ +L ++I+ Q++ + + +TN+V MG GEP NL+NV+ Sbjct: 121 AFCMTGRQGYVASLSAADILNQIY---------SLPERERLTNIVFMGQGEPFDNLDNVL 171 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPIN 249 A EI+ G+ S +R+T+ST G++ L + D +LAISLH R++I+P+ Sbjct: 172 RATEILTSPEGYAWSPKRITVSTIGLLQGLKRFLDESKCSLAISLHHAVPAEREKIMPVE 231 Query: 250 KKYNIETFLAAVRRY-------LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 + Y I+ + +++Y E + Q R++ EY++ VND + A + ELLK Sbjct: 232 RAYPIKDVVRLLKQYDFCRPRTNEGVGSKQRRLSFEYIVFSGVNDSLKDAAAIIELLKGL 291 Query: 303 PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 C+INLI ++ P P + ++ RF L ++G T +R +RG DI AACG L+ Sbjct: 292 DCRINLIRFHQIPDTPLKGVDDQKMLRFRDYLTAHGIFTTIRASRGQDIFAACGLLST 349 >UniRef50_Q3ASD4 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=RLMN_CHLCH Length = 366 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 131/358 (36%), Positives = 197/358 (55%), Gaps = 16/358 (4%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 INL+DL ++ GE PFRA Q+ +W++ + ++F M+ + LR KL E + Sbjct: 14 INLVDLRYNELHNAITAFGEPPFRAKQIHEWLFSHHANSFAAMSSLPLRLREKLAERFTL 73 Query: 78 RAPEVVEEQRSSDG-----TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKF 131 + PEVVE Q S + T K + + D +E V IP ++R T C+SSQ GC ++C F Sbjct: 74 QRPEVVEVQESCESGCLRPTRKILLKLSDGALIECVLIPAEERMTACLSSQAGCPMQCTF 133 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+T G RNL EI Q++ + + + ITNVV MGMGEPLLN +NV+ A Sbjct: 134 CATGTMGLQRNLSAGEIWEQLYA----LNGLALQEGKTITNVVFMGMGEPLLNTDNVLEA 189 Query: 192 MEIMLDDFG-FGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPIN 249 + M LS+R++T+ST G+VP +++L + LA+SLH+ E+R +++PI Sbjct: 190 IATMSSRNYNLSLSQRKITISTVGIVPEIERLSRSGLKTKLAVSLHSARQEVRQQLMPIA 249 Query: 250 -KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 ++Y + ++ Y + + +TI Y+ML+ VND E AH LA + CKINL Sbjct: 250 AERYPLPLLSKSLEAYSKATGEA---ITIVYMMLNGVNDSKEDAHLLARYCRHFSCKINL 306 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 I +NP +G S+ + F LM+ F VRK+ G ++AACGQL RT Sbjct: 307 IDYNPILTIRFGSVQESQKNEFQAYLMAQKFHVTVRKSYGASVNAACGQLVTQQQRRT 364 >UniRef50_Q0F2U6 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2U6_9PROT Length = 364 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 129/349 (36%), Positives = 194/349 (55%), Gaps = 11/349 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L LN ++ + + FRA QV+ W + N M +I LR +L Sbjct: 15 LSALNLSDLQGLMEAWMQPKFRAKQVLDWC-NKGILNPALMKNIPDALRDRLLTSLMCEP 73 Query: 80 PEVVEEQRSSDGTIKWAI-----AVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 ++ + S+DGT K+ + + +E V+IPE+ R T+C+SSQVGC L+C FC T Sbjct: 74 LRLIRRECSTDGTRKYVFALNRPRLAGKMIEAVFIPEEKRGTVCISSQVGCVLDCPFCHT 133 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG--QRPITNVVMMGMGEPLLNLNNVVPAM 192 QGF NL EI+ QV + +T +T++V MGMGEPL N V ++ Sbjct: 134 GTQGFEGNLSAGEIVAQVLAIKADLRHEPMTDDLHNDVTHIVYMGMGEPLANEEGVHGSL 193 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKY 252 I++D+ G LS+RR+T+STSG+ P +++LG + V LAISLH+ DE RD +VPIN+K+ Sbjct: 194 AILMDEDGLKLSRRRITVSTSGLTPQIERLGAVHPVNLAISLHSAIDEKRDLLVPINRKH 253 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 + + Y + + +T+EYV+LD VND E LA + +NLI +N Sbjct: 254 PLAQLRECLDAYPLATQRH---ITLEYVLLDGVNDQAEDLAALARFVNPEREWVNLIQFN 310 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P+PG Y ++ +++F++ L+S G VR++RG DI AACGQL D Sbjct: 311 PYPGTSYRGTAKESMNQFAQHLISKGIRATVRRSRGQDIMAACGQLKAD 359 >UniRef50_A8SLZ1 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLZ1_9FIRM Length = 348 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 127/354 (35%), Positives = 194/354 (54%), Gaps = 13/354 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + KI L +++ + F LGEK FRA+Q ++M+ + + KVL KLKE+ Sbjct: 3 NKKIEFNSLKIEELEDLFLSLGEKKFRAEQFFRFMHQKKNFEIENCKQLPKVLIEKLKEI 62 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 I + + S D T K+ I + D R+ ETV++ T+C+SSQVGC + C FC Sbjct: 63 GYINTSSIYTKYESKLDNTKKYLIKLFDNRIIETVFMDYGSYCTVCISSQVGCRMGCTFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ ++ F RNL E++ Q++ + I NVV+MG+GEPL N NNV+ + Sbjct: 123 ASTKENFKRNLTSGEMLNQIYLIENDLNLT-------INNVVIMGIGEPLDNYNNVIGFL 175 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 +I+ + G LS R +T+ST G+V + KL D + + L ISLH P + R EI+PI+ Sbjct: 176 KIINSEKGKNLSLRNITISTCGLVHNIYKLADEKLPITLTISLHNPFQKERREIMPISDN 235 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 ++I+ L A + Y +K++ RV+ EY ++ ND EHA +L +LK C IN+IP Sbjct: 236 FSIDEILKACKYYFDKTSR---RVSFEYTIIKGQNDSREHALELKNILKGLNCHINIIPL 292 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 N S I F +L +YG +RK +GDDI+ ACGQL V++ Sbjct: 293 NSIKEFDGVAPSTKYIYSFKSMLENYGINATIRKKQGDDINGACGQLRQGVLEE 346 >UniRef50_UPI000050FC81 radical SAM enzyme, Cfr family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FC81 Length = 410 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 134/401 (33%), Positives = 204/401 (50%), Gaps = 52/401 (12%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 ++ K +L D+ + + K++G FRA Q+ + + + + MTD+ K LR Sbjct: 11 KSPRASQPKQHLADMTMDERIDAVKEMGLPAFRAKQISTHYFSHYQTDVESMTDLPKDLR 70 Query: 69 GKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCA 126 L+E V R+++G TIK+ + D VE+V + +R TLCVSSQ GC Sbjct: 71 ADLQERFFPHLLTEVRRLRTANGDTIKFLWRLYDGALVESVLMRYRNRVTLCVSSQCGCG 130 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV---------------------- 164 + C FC+T QQG RN+ +EI+ QV RA +++ A ++ Sbjct: 131 MNCPFCATGQQGLTRNMSAAEIVEQVIRANQVIAAGELAPAPTSDMPAEGETALGAEADD 190 Query: 165 -------------------TGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD--FGFGL 203 TG ++N+V MGMGEPL N V+ A+ ++ G G+ Sbjct: 191 EQGETSEATVDESGTSTSATGPERVSNIVFMGMGEPLANYKRVMNAVRRFVEPAPQGLGM 250 Query: 204 SKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 S RR+T+ST G+VP ++KL + I V A+SLHAP+DE+RDE++P+N ++ + + A Sbjct: 251 SARRITISTVGLVPGINKLAAEDIPVTFALSLHAPDDELRDEMIPVNTRWKADEAIDAAY 310 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAPY 319 Y + + RV+IEY ++ +ND A LA+ L +N IP NP PG+ + Sbjct: 311 NYYQVTGR---RVSIEYALIKDMNDHPWRAELLAKKLNARGRGWVHVNPIPLNPTPGSVW 367 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 S D F + L+ G T +R TRG DID ACGQLA Sbjct: 368 TASEPEVADEFVRRLIDQGIPTTIRDTRGSDIDGACGQLAA 408 >UniRef50_UPI00016C54F2 hypothetical protein GobsU_25056 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C54F2 Length = 355 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 126/345 (36%), Positives = 190/345 (55%), Gaps = 7/345 (2%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 + + +R + + G+ P R +Q+ K + F++M+D+ K LR L + + V Sbjct: 1 MPAETLRAWLTERGQPPMRVNQICKQILANRATAFEDMSDLPKGLRADLAGAFRVFSMSV 60 Query: 83 VEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 +SD T K+ + + D R +E V I +D RAT C+S+QVGC + C FC++ G R Sbjct: 61 ERHFAASDDTHKFVLRLADGRMIEAVLIQDDGRATACISTQVGCGMGCVFCASGLNGVVR 120 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQR--PITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 NL E++ Q+ + A +R +T++V+MGMGEPL NL+N++ A+ + D Sbjct: 121 NLTAGEMVEQLVLLRNLTDANSTNPERAPRLTHIVVMGMGEPLANLDNLLDALAVAGDKN 180 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G G+ R VT+ST G+ + KL + LA+SLHAPNDE+R IVP N K ++ L Sbjct: 181 GLGIGARHVTISTVGLPAKIRKLAESGKQYHLAVSLHAPNDELRTRIVPTNDKVGMDAIL 240 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 AA + EK+ +VT EYV+L +ND HA QLA LL+ +NLIPWN G Sbjct: 241 AAADEFYEKTGR---QVTYEYVVLGGLNDQAPHARQLAGLLRGRQAHVNLIPWNAVEGLA 297 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 + R +++ + L G + VRK +G +IDAACGQL Sbjct: 298 FKRPADADLQYLIDTLRRGGISVKVRKRKGAEIDAACGQLRRQAE 342 >UniRef50_Q01QF9 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Acidobacteria RepID=RLMN_SOLUE Length = 356 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 203/353 (57%), Gaps = 10/353 (2%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 T L+ ++ +RE + +RA Q+ + +Y N +++ + LR L Sbjct: 11 TGNRMSQPLVGMDLTDLREALGS-DQPGYRAKQIYEAIYRGQAANLVQISTLPAQLREDL 69 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 E+ PE+ +S+DGT ++ + + D R VETV +P+ +R T+C+SSQVGC ++CK Sbjct: 70 AARHEVGLPEIAHLYQSTDGTRRYLLKLEDGRTVETVLMPDGERDTICISSQVGCPVDCK 129 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC TA G R+L EI+GQV A+ + G+ N+VMMG GEPLLNL NVV Sbjct: 130 FCMTALMGLERSLTAGEIVGQVLLVARENQLRQDGGR---LNIVMMGQGEPLLNLENVVK 186 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 A I+LD GFGLS RRVT+ST+G++P + +LG + + LAISL+A +E R E++PI Sbjct: 187 ATRILLDPAGFGLSPRRVTVSTAGIIPKIAELGREPVRPKLAISLNASTEESRQELMPIT 246 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 +KY+++ LAA + Y ++T EYV+L VND A ++ +LL + K+NLI Sbjct: 247 RKYHLKDLLAACKAYPL---RPWEKLTFEYVLLRGVNDTDADARRVVKLLSNLNAKVNLI 303 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 NP PG PY R+ F ++ VRK RG DI AACGQL +V Sbjct: 304 ALNPGPGIPYATPDPERVASFQNIVRRA-LPCFVRKPRGLDIYAACGQLKRNV 355 >UniRef50_D1BMC5 Radical SAM enzyme, Cfr family n=3 Tax=Veillonella RepID=D1BMC5_VEIPT Length = 348 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 133/354 (37%), Positives = 202/354 (57%), Gaps = 14/354 (3%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 I LL + ++++ FK + FRA Q+ ++YH +F++MT K LR L + I Sbjct: 2 IELLGKSLEELQSIFKTHNIQKFRAKQLFDYIYHRYIFDFEDMTQFPKDLRQWLNDNCVI 61 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 P ++ E + DG T K + + DQ RVE V + + ++CVSSQVGCA+ C FC++ Sbjct: 62 SLPTLITESIAPDGKTRKILVEMTDQSRVEAVLMEQHYGYSVCVSSQVGCAMGCVFCAST 121 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q G R+L V+EIIGQV + + I +VV+MG GEPL N +NV+ A++++ Sbjct: 122 QGGLYRDLTVAEIIGQVVIFGALT-------KEEIHSVVVMGAGEPLQNYDNVLQALQLL 174 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 D +S R++T+ST G VP + KL D + + LA+SLHA N+E+R I+P+ +Y + Sbjct: 175 HDPMICNISYRKMTISTCGWVPNIYKLADEALPITLALSLHATNNEVRRSIMPVGARYEL 234 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNP 313 L AV+ Y + Q RVT EY+++D VN + AH L ++ KD P C +NLIP N Sbjct: 235 TEVLDAVKYYYNTT---QRRVTFEYILIDSVNASMDEAHALGKICKDFPNCHVNLIPVNG 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 + S + ++ F ++ SYG + VRK GD I AACGQL + + Sbjct: 292 NEHIELYKPSITNMNTFKDIVSSYGVSVTVRKEMGDAIQAACGQLKAAHGRKKE 345 >UniRef50_A9FFJ6 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RLMN_SORC5 Length = 389 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 184/371 (49%), Gaps = 45/371 (12%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVE 84 ++ GE+ F A QV +W++ + MT++ LR L Sbjct: 13 PEEWSASLAARGERSFTAKQVFQWIHRRGVLDPAAMTNLPARLREHLAAEGLGEVLTPER 72 Query: 85 EQRSSDGTIKWAIAVGDQ-RVETVYIPEDD------------------------------ 113 RS DGT K + + D +ETV +P Sbjct: 73 VHRSEDGTRKLLLRLRDGATIETVLLPSVSGPGSQAQLDADAAAALDDDEDDDAAAEAGA 132 Query: 114 ----RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 R T C+S+QVGCA+ C FC++ G R+L EI GQV +G A + Sbjct: 133 APRVRVTQCISTQVGCAMGCGFCASGVAGLKRHLGAEEIAGQVL-----LGRAMLEEGEE 187 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI--D 227 + NVV MGMGEPL N ++ ++ G LS RRVT+STSG+VP + +LG Sbjct: 188 LRNVVYMGMGEPLHNYEATARSLRLLTHPEGINLSTRRVTVSTSGLVPEIARLGADFGGQ 247 Query: 228 VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVND 287 +ALAISLHA +DE R ++PIN+K+ ++ LAA+R Y + R+TIEY ++ ND Sbjct: 248 IALAISLHAADDETRSALMPINRKHPLDELLAALRAYPLP---RRRRITIEYTLVAGQND 304 Query: 288 GTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTR 347 A +LA+LL+ P KINLIP NP + G + R+ F +VL G++ VR+ R Sbjct: 305 DPAEARRLAKLLRGLPVKINLIPMNPIEASSLGPPAQERVAAFQEVLTQAGYSCFVRRRR 364 Query: 348 GDDIDAACGQL 358 GDD+ AACGQL Sbjct: 365 GDDVSAACGQL 375 >UniRef50_C9LLK4 Radical SAM enzyme, Cfr family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK4_9FIRM Length = 345 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 193/351 (54%), Gaps = 13/351 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K N+ LN Q++ + G FRA Q+ ++Y +FDEMT ++ +R LKE + Sbjct: 2 KRNIWGLNLQELETWVVGNGFPRFRAKQLRDYLYKRHIFHFDEMTQFSQKMRDWLKENGQ 61 Query: 77 IRAPEVVEEQRSSD-GTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P ++ +S D TIK + + D VETV + ++CVS+QVGCA+ C FC++ Sbjct: 62 IDKPVIISRAQSDDEKTIKLLLKLKDGSLVETVCMCHHYGNSICVSTQVGCAMGCIFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 ++G RNL EI+ Q++ ++ P ++V+MG GEPL N V+ + + Sbjct: 122 TRKGLERNLTAGEILAQMYAFKELYDI-------PFHSIVLMGAGEPLTNYKEVLHFIHL 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 D +S R +T+ST G+VP + +L D I + LAISLHAPND IR+ +VPI+K + Sbjct: 175 ANDPELLNISYRNITISTCGIVPQIYRLADENIPITLAISLHAPNDRIRNVLVPISKNFR 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I+ ++A Y +K+ RVT EY+++ +N E+A +L L+ PC INLIP N Sbjct: 235 IKDVVSAAEYYFKKTKR---RVTFEYILIKDMNASVENAKELCRLIGKMPCHINLIPINS 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 I RF +L+ G T VRK GD+I AACGQL ++ Sbjct: 292 TEHIKLYPPEWKEIKRFQDILLKKGKETTVRKQMGDEIQAACGQLKRRYLN 342 >UniRef50_A0LV48 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Acidothermus cellulolyticus 11B RepID=RLMN_ACIC1 Length = 430 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 142/388 (36%), Positives = 204/388 (52%), Gaps = 33/388 (8%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 VT + +L D + + R + +LGE FRA Q+ + +N DEMTD+ R Sbjct: 28 AVTRRGVPRHLADFSLAERRRWVAELGEPSFRAVQISAHYFGRLTENPDEMTDLPASSRR 87 Query: 70 KLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPE---------------- 111 +L V V E +G T K + D VE+V + Sbjct: 88 ELVGVLLPPLLRPVRELACDNGLTRKILWRLSDGAYVESVLMRYPPRHSRHAALGAEADA 147 Query: 112 -----DDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG 166 R TLCVSSQ GC + C FC+T Q G RNL +EI+ QV AA+ V ++ G Sbjct: 148 DGGSRHGRVTLCVSSQAGCGMGCPFCATGQAGLVRNLSAAEIVAQVAVAARTVARGEMAG 207 Query: 167 QR-PITNVVMMGMGEPLLNLNNVVPAMEIMLDD--FGFGLSKRRVTLSTSGVVPALDKLG 223 ++NVV MGMGEPL N +VV A+ + + G G+S+R VT+ST G+VPA+++L Sbjct: 208 GPGRLSNVVFMGMGEPLANYRSVVDAVRRITEPPPEGLGISQRSVTVSTVGLVPAIERLA 267 Query: 224 -DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 + + V LA+SLHAP+DE+R+ +VPIN+++ + L A RY E + RV++EY ++ Sbjct: 268 TEGLAVTLAVSLHAPDDELRNVLVPINRRWPVRDVLGAAARYAEVTKR---RVSVEYALI 324 Query: 283 DHVNDGTEHAHQLAELLK---DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGF 339 VND A LA +K +NLIP NP PG+P+ S+ F + L + G Sbjct: 325 RDVNDQPWRADALAAQVKEFLGRLGHVNLIPLNPTPGSPWTASTPRAQAEFVRRLAAAGV 384 Query: 340 TTIVRKTRGDDIDAACGQLAGDVIDRTK 367 T VR TRG +++ ACGQLA V R + Sbjct: 385 TVTVRDTRGREVNGACGQLAATVEFRGR 412 >UniRef50_B1ZVM5 Ribosomal RNA large subunit methyltransferase N 2 n=2 Tax=Opitutaceae RepID=RLMN2_OPITP Length = 428 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 125/376 (33%), Positives = 187/376 (49%), Gaps = 35/376 (9%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 NL D R ++R + P A ++ ++Y + F MT++ +R +L+ Sbjct: 51 APTNLYDFTRAELRLWLSRRELNPVHAARIWSYLYLDLVEGFGAMTELPARVRARLEAEM 110 Query: 76 EIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCS 133 + ++ E S DG T K+ + + D +ETV + RAT CVSSQVGCA+ C FC+ Sbjct: 111 CVGNLKIARETDSRDGFTRKYLLELADGAAIETVLMRFAGRATACVSSQVGCAMGCVFCA 170 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAA----------------------------KVT 165 T Q G+ R+L EI+ Q A+ + A + Sbjct: 171 TGQMGYTRHLTAGEIVAQAVHVARALRTAAFEKCHVMRDPSPGREAGEKSRDEADRHRAP 230 Query: 166 GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GD 224 + N+V+MGMGEPL N V+ A++I+ DD G L R+TLST GVVP + +L + Sbjct: 231 PTPRLRNLVLMGMGEPLHNYEAVMRAVDILRDDGGLALGAERITLSTVGVVPGILRLAAE 290 Query: 225 MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDH 284 V LA+SLHA + E R +VP+ KK+ ++ +AA R Y E + RV E+ +++ Sbjct: 291 KRPVHLAVSLHAADQEERAALVPVAKKWPLDELMAACRTYSETTGR---RVFYEWTLIEG 347 Query: 285 VNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL-MSYGFTTIV 343 ND HA + LL+ P ++NLIP NP G RF ++L + + V Sbjct: 348 RNDTAAHARAVGRLLRGLPAQVNLIPLNPTAGYDGTPGRTEAARRFQEILSREFALPSTV 407 Query: 344 RKTRGDDIDAACGQLA 359 R+ RG DI A CGQLA Sbjct: 408 RQRRGIDIAAGCGQLA 423 >UniRef50_Q0F1H4 Radical SAM superfamily protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1H4_9PROT Length = 357 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 136/352 (38%), Positives = 196/352 (55%), Gaps = 13/352 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC--CDNFDEMTDINKVLRGKLKEVAEI 77 L +N Q+ G P AD++ ++ + + + D+ LR L E + Sbjct: 7 LNGMNHDQLLALCGAAGVSPAHADRLRAAIFRHYGSDTDINNTPDLPLRLRSYLAEHTAL 66 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 P DGT K +A+ D R VETV IP + R T C+S+QVGCA+ C FC TA Sbjct: 67 LQPASTATSEGEDGTRKLLLAMADGREVETVLIPGNGRLTQCISTQVGCAVGCTFCLTAT 126 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL +E++ +V +I G R + N+V+MGMGEPL N + V + + Sbjct: 127 AGLTRNLTAAEMVAEVTAGQRISG-------RQVRNLVLMGMGEPLHNYDEVAHFVRLAT 179 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D G S RVTLSTSG+VPA+ ++ D + LA+SL+A ND +RD I+PIN+KY I Sbjct: 180 DPKGMAFSPNRVTLSTSGLVPAMQRMIRDELPCNLAVSLNATNDAVRDTIMPINRKYPIA 239 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 L VR Y+ RV IEYV+LD +ND A +L EL+ C +NL+P+N +P Sbjct: 240 MLLDTVREYIRV--RGNKRVLIEYVLLDGINDSQADAIRLCELMAGMGCTVNLLPFNAYP 297 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 G P+ R +++ + F +L+ G T+VR+++G DI AACGQL +V+ R K Sbjct: 298 GLPFQRPADAAVSAFRAILVEAGIITVVRESKGRDIAAACGQLKTEVVQRRK 349 >UniRef50_B9HMI5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HMI5_POPTR Length = 441 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 132/372 (35%), Positives = 197/372 (52%), Gaps = 33/372 (8%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE-IR 78 LL ++ ++++ DLG++ +R Q+ +Y + + + V R L+E + Sbjct: 55 LLGMSEPELQQLATDLGQQSYRGKQLHHLIYQRKVKEIQDFSQLPLVFRNDLQEAGWKVG 114 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----RATLCVSSQVGCALECKFC 132 + + ++DGT+K I + D R +ETV IP +D R T CVSSQVGC L C FC Sbjct: 115 RSPIFQTVTAADGTVKLLIRLEDNRLIETVGIPVEDEKGSMRLTACVSSQVGCPLRCSFC 174 Query: 133 STAQQGFNRNLRVSEIIGQV-----------------WRAAKIVGAAKVTGQRPITNVVM 175 +T + GF+RNL+ EI+ Q A+++ ++ R +TNVV Sbjct: 175 ATGKGGFSRNLQRHEIVEQHRLGSSGTTSTCSKLYLHVLYAQVLAVEEIFKHR-VTNVVF 233 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISL 234 MGMGEP+LNL +V+ A + D + +R +T+ST GV + KL + LA+SL Sbjct: 234 MGMGEPMLNLKSVLEAHRCLNKDV--QIGQRMITISTVGVPNTIKKLASHKLQSTLALSL 291 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 HAPN ++R+ IVP K Y ++ + + Y +++ RV+ EY +L VND EHA + Sbjct: 292 HAPNQKLRETIVPSAKSYPLDAIMKDCKEYFLETSR---RVSFEYALLAGVNDRVEHAKE 348 Query: 295 LAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDID 352 LAELL +NLIP+NP G+ Y R I F+ VL S T VR+TRG D Sbjct: 349 LAELLHQWGRGHHVNLIPFNPIQGSDYKRPHKKAIQAFAAVLESRKVTVSVRQTRGLDAS 408 Query: 353 AACGQLAGDVID 364 AACGQL + Sbjct: 409 AACGQLRNEFQK 420 >UniRef50_C9RKM0 Radical SAM enzyme, Cfr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKM0_FIBSS Length = 357 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 9/347 (2%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+ L +++ + +D+ EKP+RADQ+ KW++ ++DEM +I+ LR K+ + + Sbjct: 6 NIKTLTTDELKAWLRDVDEKPYRADQIQKWLFCQQVRSYDEMVNISPALREKMAKQFTLC 65 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 + + S DGT+KW D +ETV IP + R ++CVS+QVGCA+ C FC TA+ Sbjct: 66 GLKEDQRSVSVDGTVKWLFETEDGHHIETVMIPANGRYSVCVSTQVGCAMNCAFCRTAKM 125 Query: 138 GFNRNLRVSEIIGQV----WRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 GF RNL EI+ ++ W + G +TN++ MGMGEPL NL NV Sbjct: 126 GFTRNLEAGEILEEIINVNWYLKDNGFMNEEGGVAQVTNIIFMGMGEPLNNLENVHRVCC 185 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKY 252 + + F + +R+T+STSGVVP + +L D LA+SL++ N+E R ++P+NK + Sbjct: 186 TLHNQKLFNMGAKRMTVSTSGVVPKIKELVDRNTPCCLAVSLNSTNNEYRSSVMPVNKTW 245 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 IE L AV Y+ ++ VT E+V++ ++ + A +L + K+N I N Sbjct: 246 PIEKLLEAVDEYIRRT---DNYVTFEFVLIQNITCTPKAAKELIRICAPRRVKVNAIVLN 302 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 + ++ F + + +R RG DI AACGQLA Sbjct: 303 DGDDPTLHAPTPEEVEDFLAAVRAAEIQITIRNPRGRDILAACGQLA 349 >UniRef50_C1EEM6 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EEM6_9CHLO Length = 375 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 126/364 (34%), Positives = 183/364 (50%), Gaps = 23/364 (6%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYH-YCCDNFDEMTDINKVLRGK 70 D NLL + +++ F ++ G FR Q+ +Y N D++ + K R + Sbjct: 16 PGVDPSYNLLGMTLPELKTFAEEAGLPKFRGKQLRDHLYGVKPAKNIDDLVTLPKAARRQ 75 Query: 71 LKEVAE-IRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDD----RATLCVSSQVG 124 L + + V S DGT K + + D RV ETV IP + R T CVSSQVG Sbjct: 76 LLDAGVSVGRSVVHHVAGSPDGTTKLLLRLHDDRVVETVGIPAHEAGHRRLTACVSSQVG 135 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C + C FC+T + GF RNL EI+ QV + G +T++V MGMGEPLLN Sbjct: 136 CPMRCTFCATGKGGFARNLATHEIVDQVVSLEEHFG-------ERVTHIVFMGMGEPLLN 188 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRD 243 + NV+ A E + + G + R +T+ST GV A+++L + LAISLHAPN E+R+ Sbjct: 189 VPNVLRAHEALNKEVG--IGSRHITISTVGVRGAIERLARAKLQSTLAISLHAPNQELRE 246 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KD 301 ++P K Y ++ L ++Y + RVT EY +L VND + A +L LL Sbjct: 247 RLIPSAKAYPMQELLNDAQQYFIATGR---RVTFEYTLLAGVNDSIQQAEELGRLLYKNK 303 Query: 302 TPCKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 +N+IP+NP AP + R + I F L +R++RG + AACGQL Sbjct: 304 LASHVNIIPYNPVDDAPDFKRPGRASILNFRNTLEQMNVPASIRQSRGLEAAAACGQLRN 363 Query: 361 DVID 364 Sbjct: 364 AYQK 367 >UniRef50_C0QZJ2 Predicted Fe-S-cluster redox enzyme n=2 Tax=Brachyspira RepID=C0QZJ2_BRAHW Length = 342 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 195/351 (55%), Gaps = 14/351 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI++++++ ++ +F + F A Q++ W+Y +F+EM++I K LR L E Sbjct: 3 KKISIMNVSEDELSKFCVENNFPKFHASQILNWIYKKYAVSFEEMSNIPKNLRNLLDEYY 62 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I ++ GT K I++ D +++E+V + + DR T C+SSQVGC C FC+T Sbjct: 63 FIHNSKIETISEDEYGTQKLLISLYDKKKIESVILNKKDRVTFCLSSQVGCGYGCAFCAT 122 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G +RNL EI+ + + + + ++V MGMGEPL N N+ A++ Sbjct: 123 GSMGLSRNLTADEILAEFLLMRAV--------TKKVNSIVFMGMGEPLANTKNLFKAIDT 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + GF L R +T+STSG V + +L + +D LA+SLH+ +++RD+I+PINK+Y Sbjct: 175 INSFKGFNLGIRHITISTSGEVAGIKQLIERDLDCRLAVSLHSLKNDVRDKIMPINKRYP 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 IE +A ++RY S + +T E+V++ VND A++L L K+ P K+N+IP NP Sbjct: 235 IENLMAILKRY---SRNGKRMITFEWVLIKDVNDSVNDAYRLVNLKKEFPFKVNVIPMNP 291 Query: 314 FPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 AP R + I RF +L G + R +G +I A CGQLA + Sbjct: 292 VEHAPELQRPNKDIILRFKSILKDNGIEVVERFKQGQEILAGCGQLAVKNM 342 >UniRef50_B7FZP4 Predicted protein (Fragment) n=2 Tax=Bacillariophyta RepID=B7FZP4_PHATR Length = 378 Score = 403 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 130/380 (34%), Positives = 194/380 (51%), Gaps = 30/380 (7%) Query: 7 TPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKV 66 T +T + +NL + + ++ G +RA QV W+ + MT++ K Sbjct: 4 TTSLASTSNRVLNLSTVTQAELEILMVAWGHPKYRAQQVYNWIRQQGVTDVALMTNLPKT 63 Query: 67 LRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDD-RATLCVSSQVG 124 LR +L E ++ R+ E+ E S DGTIK A D +E+V +P D R T C+SSQ G Sbjct: 64 LRAQLSEFSKPRSLEIAAEMVSKDGTIKRAYRCADGQMIESVLMPYKDGRYTACISSQAG 123 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIV------------GAAKVTGQR--PI 170 CA C FC+T Q GF R L EI QV A + G ++ R + Sbjct: 124 CAQGCVFCATGQMGFARQLTADEIFEQVAIFANELQQQKDQQQYIDAGGQEIQHGRATRL 183 Query: 171 TNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG---DMID 227 +NVV MGMGEPL N NVV A+ + +D G+ R++T+ST G+VP + KL DM Sbjct: 184 SNVVFMGMGEPLANYRNVVKAVNRITND--LGIGARKITVSTVGIVPNIVKLTTDPDMPP 241 Query: 228 VALAISLHAPNDEIRDEIVPINKKY-NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVN 286 + LA+SLH +D+ R +++P N++Y ++ + A+R Y+E + R+T+E+ ++ N Sbjct: 242 IRLAVSLHCASDKERSDLLPANRRYGGLDELMPALRDYIETTGR---RITLEWALIQGEN 298 Query: 287 DGTEHAHQLAEL-----LKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTT 341 D + A LA L L+ +N+IP NP G + ++ F K L +G Sbjct: 299 DNADSARTLASLVQRYGLRRDMVHVNVIPLNPTGGFEGTPTQRQNVNVFVKTLEEHGIAC 358 Query: 342 IVRKTRGDDIDAACGQLAGD 361 R RG DIDA CGQL Sbjct: 359 TPRVRRGIDIDAGCGQLTSK 378 >UniRef50_B0S143 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Finegoldia magna RepID=RLMN_FINM2 Length = 349 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 122/360 (33%), Positives = 202/360 (56%), Gaps = 15/360 (4%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 KI L ++ +++EFF + GEKPFRA Q + ++ N DEMT+ + LRGKL + Sbjct: 2 QNKIILENMTVDELKEFFVNNGEKPFRALQYFQAIHKNRIFNPDEMTNFSNSLRGKLNQY 61 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 +I+ +++ S D T K+ I + D + ETV++ ++C+S+Q+GC + CKFC Sbjct: 62 NDIKNCSIIKRIDSKLDNTKKYLIEMSDGNIVETVFMQYKTHTSICLSTQIGCKMGCKFC 121 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ ++ F RNL+ E+ Q++ + I N+V+MG+GEPL N +NV + Sbjct: 122 ASTKKSFVRNLQPYEMCAQIYLVENDLDI-------RINNIVLMGIGEPLDNYDNVSRFI 174 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 +++ D G +S R +TLST G+V + +L D I + + ISLH P D R++++PI K Sbjct: 175 DLITDKDGQDMSIRNITLSTCGLVDKIIRLANDDIGINITISLHNPFDNERNKLMPIGNK 234 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y+IE L A Y +K+ R+ EY ++++VND ++ +L LLK+ C +NLI Sbjct: 235 YSIEEILDACDYYFKKTKR---RIGFEYTVIENVNDSKKYMDKLVSLLKNRNCLLNLITL 291 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 NP ++ F + + T +R+ +G DID ACGQL + + TKR ++ Sbjct: 292 NPIEEFNQKSPDRYKMTEFMEYMNKNNVNTTIRRKQGIDIDGACGQLR--INNMTKRGVK 349 >UniRef50_C1SKY4 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKY4_9BACT Length = 357 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 127/356 (35%), Positives = 201/356 (56%), Gaps = 11/356 (3%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 I L +N+ ++ F G + FRA Q+ KW+Y ++ EMTD++ R KL +A+ Sbjct: 5 IYLDSMNKFELENFVISQGMQKFRAIQIHKWVYRRGAESVAEMTDLSIADREKLLGMAKF 64 Query: 78 RAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 V + ++S+ DG++K+ ++ D +E V + + R T C+SSQVGC + C FCSTA Sbjct: 65 TVMNVADVRKSAMDGSVKFLFSLEDGETIEAVVLNDGRRLTACISSQVGCRMGCAFCSTA 124 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G RNL + EII QV R + + + + N+V MGMGEPL NL+NV A+ ++ Sbjct: 125 KMGLRRNLTMGEIIKQVKRLNEYLASE----GTKLNNLVFMGMGEPLDNLDNVKNAINVL 180 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 LDD G+G S +++TLST G+ L++L V LA+S++A + E R ++P++ KY + Sbjct: 181 LDDDGYGFSHKKITLSTCGLTDRLEELFAMDTPVNLAVSVNAADQETRKGLMPVSNKYPL 240 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT-PCKINLIPWNP 313 + +++ + + +TIEYV+L VND + A +LA+LL+ KINLI +N Sbjct: 241 SGLMDVLKKLPLQ---KRKSITIEYVLLRGVNDTLDDARKLAKLLRGLDKVKINLITYNS 297 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 A Y S +F + L+S +RK+ G DI+ ACGQL + K Sbjct: 298 GGDAGYLPPSEKDTLKFQEYLISNKIGVFIRKSLGRDIEGACGQLRAKHDESQKSE 353 >UniRef50_UPI0001C31CDE radical SAM enzyme, Cfr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CDE Length = 329 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 132/340 (38%), Positives = 186/340 (54%), Gaps = 20/340 (5%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 ++ + D + FRA QV +W ++EMT++ LR L E + + Sbjct: 1 MDLDLLDRTLADEDQPRFRAKQVWEWT-ARGAAGYEEMTNLPAALRATLAERVPFSSLTL 59 Query: 83 VEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-RATLCVSSQVGCALECKFCSTAQQGFN 140 E +SDGT+K + D R VE V + D R +LC+SSQ GC L C FC+T F Sbjct: 60 QHEAHASDGTVKALFSTHDGRAVEAVLMRYKDGRRSLCLSSQSGCPLTCTFCATGTMKFG 119 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 RNL SEI+ Q +I + + V MGMGEP++NL++V+ A + Sbjct: 120 RNLTASEILDQALHFRRI---------EEVDHCVFMGMGEPMMNLDHVLAACRALPS--- 167 Query: 201 FGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 G++ RR +ST G +P +++L D + + LA+SLHAP++ +R +I+P+N +Y + L Sbjct: 168 IGITHRRTAISTVGWIPGIERLTDSEMPIRLALSLHAPDEALRSQIMPVNDRYPLRDVLR 227 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPY 319 A R + EK + V IEYVML VNDG A QLA LL+ K+NLIP+NP Y Sbjct: 228 ACRDFYEK---KRRMVFIEYVMLGGVNDGYAQALQLARLLEPWMFKVNLIPYNPTDSI-Y 283 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 SS I+ F VL +G + VR TRG DIDAACGQLA Sbjct: 284 DGSSREAIETFRAVLEEHGISATVRLTRGRDIDAACGQLA 323 >UniRef50_Q1AYW0 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RLMN_RUBXD Length = 355 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 118/339 (34%), Positives = 176/339 (51%), Gaps = 12/339 (3%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVE 84 ++ E + GE P+R QV + +DE+ + K LR +L E+ Sbjct: 19 LPEVEEVLAERGEPPYRLRQVYAALAGSLASGWDEVASLPKGLREELAGRVPASVLELRR 78 Query: 85 EQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNL 143 R+ DGT K+ D +ETV IPE R T+C+S+QVGC + C FC+T G RNL Sbjct: 79 ISRARDGTRKYLFFTRDGHAIETVMIPERSRRTVCISTQVGCPMACTFCATGLLGIKRNL 138 Query: 144 RVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 + EI QV+ A+ + +TNVV+MGMGEP LN + A+ ++ D GF L Sbjct: 139 KAREIAEQVFAVARDIA------PERVTNVVVMGMGEPFLNYRETLRALRVLNDRRGFNL 192 Query: 204 SKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 + R + +STSG+V + + D LAISLH P +E R ++P+ ++ I + A R Sbjct: 193 AARHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERRRLMPVAARHPIPELMNAAR 252 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRS 322 Y+E++ ++ EY +L VND HA LAELL +NL+ +N + + + Sbjct: 253 YYVERTRR---KLFFEYTLLAGVNDRMRHAEALAELLDHPLYHLNLLRFN-WTDTGFSAT 308 Query: 323 SNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 S R F + G + +R +RG DI+AACGQLA Sbjct: 309 SARRAKEFLRRARELGLSATLRPSRGQDIEAACGQLAAR 347 >UniRef50_C7NGZ4 Radical SAM enzyme, Cfr family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NGZ4_KYTSD Length = 426 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 138/394 (35%), Positives = 194/394 (49%), Gaps = 54/394 (13%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 +L DL+ ++ D G FRA+Q+ K + D MTD+ K R ++ Sbjct: 29 QHLADLDPAGRKQAVTDAGWPAFRANQLSKHYFERYTDEPAAMTDLPKAGREEMVRGLMP 88 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + V R+ DG T+K + D VE+V + +R TLC+SSQ GC + C FC+T Sbjct: 89 QLLTPVSVMRADDGATVKTLWRLHDGALVESVLMRYPNRVTLCLSSQAGCGMNCPFCATG 148 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG----------------------------- 166 QQG RNL +EI+GQ+ A +++ + G Sbjct: 149 QQGLTRNLSTAEIVGQLVAANRMLNDPEAPGLAPPPALAEGQVELGENDADPSLDAGADE 208 Query: 167 --------------QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF--GFGLSKRRVTL 210 + NVV MGMGE L N V A+ M+D G G+S R +T+ Sbjct: 209 VEDASLDTPLAAGGPHRVHNVVFMGMGEALANYRKAVDAVRRMVDPAPAGLGMSARGITM 268 Query: 211 STSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSN 269 ST G+VPA+DK + + LA+SLHAP+DE+RDE+VPINK++ ++ L A RY E + Sbjct: 269 STVGLVPAIDKFAAEGVAATLALSLHAPDDELRDELVPINKRWKVDEALDAAYRYFETTG 328 Query: 270 ANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAPYGRSSNSR 326 RV+IEY ++ +ND A LAE L +N IP NP PG+ + S Sbjct: 329 R---RVSIEYALIRDMNDQAWRADLLAEKLNARGRGWVHVNPIPLNPTPGSKWTASRPGV 385 Query: 327 IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 +F + L + G T VR TRG DID ACGQLA Sbjct: 386 EQQFVERLRAGGIPTTVRDTRGSDIDGACGQLAA 419 >UniRef50_C1F813 Radical SAM enzyme, Cfr family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F813_ACIC5 Length = 396 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 139/376 (36%), Positives = 199/376 (52%), Gaps = 41/376 (10%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV-AEIR 78 L L+ +++ E D P+R QV +Y ++ E+T + + LR L++ Sbjct: 27 LFGLSFEELSEALADFRLPPWRLRQVRHALYRQWAASWSEVTTLPQELRESLEKAGFAPG 86 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPED------------------------- 112 P +VE RS DGT ++ IA D VETV++P Sbjct: 87 LPGIVETFRSVDGTERYLIAGHDGQTVETVWMPGGDGGEAGDGSGSDGAGDDRPGEDSGE 146 Query: 113 ---DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 RAT+CVSSQ+GCA+ C+FC TA+ G RNL EI GQV + +V R Sbjct: 147 AAYQRATICVSSQIGCAVNCQFCLTARLGIIRNLTAGEIAGQVVAV---LKRQQVEMGRD 203 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DV 228 N+V MGMGEP LN + + A+ ++ D+ G +S R+T+STSG+VP + + + Sbjct: 204 RINLVFMGMGEPFLNYDAFMDAVRLLSDEVGIPVS--RMTVSTSGIVPGILRFAEEPVRP 261 Query: 229 ALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDG 288 LAISL+AP+D +R+ ++PIN+K++I L AVR + + RVT EYV+L VND Sbjct: 262 KLAISLNAPDDIVREAVMPINRKWDIAEVLDAVR---KVPLRAKERVTFEYVLLGGVNDQ 318 Query: 289 TEHAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKT 346 EHA +A LL+ + P K+NLI WNP P PY + F + L+ G +R+ Sbjct: 319 PEHAETVARLLRRANLPLKVNLIVWNPGPDVPYTMPKAEDVAAFQEYLVGKGVPAYIRRP 378 Query: 347 RGDDIDAACGQLAGDV 362 RG DI AACGQL V Sbjct: 379 RGRDIYAACGQLKRTV 394 >UniRef50_Q7V010 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Prochlorococcus marinus RepID=RLMN_PROMP Length = 348 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 119/354 (33%), Positives = 192/354 (54%), Gaps = 23/354 (6%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFDEMTDINKVLRGKLK-EVA 75 NLL + + + + + G+ FR Q+ W+Y + DE+ + R +LK E Sbjct: 3 NLLGCSVKDLEKIALNYGQAAFRGRQIYNWLYNYKNRSKSIDEINVLPLKFRDQLKNEAF 62 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCST 134 + E+ ++DGT+K + D VE V IP + R T C+SSQVGC ++CKFC+T Sbjct: 63 LFGELTLKEKYLATDGTLKLLLNTRDNESVECVGIPTEKRLTACLSSQVGCPMDCKFCAT 122 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 ++G R+L+VSEI+ Q+ + ++N+V MGMGEPLLN++ ++ ++ Sbjct: 123 GKEGLKRSLKVSEILDQILFIENQMNQ-------KVSNIVFMGMGEPLLNIDELLLSIRS 175 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-------DVALAISLHAPNDEIRDEIVP 247 + +D F +S+R++T+ST + + KL ++ LAISLHA N +IR+ I+P Sbjct: 176 INED--FAISQRKITVSTVAIPKMISKLSELSFQVLGKCQFTLAISLHASNQKIREAIIP 233 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 K Y+I+ + R Y+ ++ RV+ EY+ML VND EHA +L+ L+K C +N Sbjct: 234 SAKNYHIKNIIDDCREYVRETGR---RVSFEYLMLHGVNDKLEHADELSNLIKGFQCHVN 290 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 LI +N + ++ F L + G RK+RG D +AACGQL + Sbjct: 291 LIQYNHIEEVEFKQTPIKNAQLFQTRLSNSGINVSFRKSRGSDRNAACGQLRQN 344 >UniRef50_A6DSV2 YloN n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSV2_9BACT Length = 345 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 190/350 (54%), Gaps = 13/350 (3%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +NR++++ + FRA Q+ + + + +FD++T+ K LR KL E ++ V Sbjct: 1 MNRERIQTIVDEYKLPKFRAKQLKEAFFEHHYSSFDQLTNFPKDLRNKLTEENQVLCLTV 60 Query: 83 VEEQRSSDG-TIKWAIAVGDQ-RVETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQGF 139 + SSD T K + + D ++E+V + P+ T C+SSQVGCA++C FC+T G Sbjct: 61 NKVFASSDQVTYKALLELHDGLKIESVLMSPKPGLWTACISSQVGCAMKCSFCATGTMGL 120 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL EI QV + + + R + NVV MGMGEPL N V ++E + + Sbjct: 121 TRNLTSEEISDQVLFWRQFIAKNDIDTDR-LNNVVYMGMGEPLHNTKEVFSSIEELTAED 179 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F + R +++STSG++ + ++ + V LA+SLHA DE+R I+PINK +++E Sbjct: 180 SFKIGSRHISVSTSGLLKGVKEMAEKFPQVNLALSLHAAKDELRSSIMPINKAFDLEKIR 239 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP----CKINLIPWNPF 314 + Y++ ++ +V IEYV+L+ N+ HA +L++ LK NLI +N Sbjct: 240 TCLDEYIDSTHR---KVFIEYVLLEGENNELSHAVELSKFLKSLKRPELTHTNLIVYNET 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 + + S+ + D+F L S G + +RK G DID ACGQLA + Sbjct: 297 D-SEHKGSTKQKADQFRNHLKSKGLSVTIRKNLGRDIDGACGQLAVKEEN 345 >UniRef50_B0VIB4 Putative radical SAM-dependent enzyme (YfgB) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIB4_9BACT Length = 350 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 125/353 (35%), Positives = 198/353 (56%), Gaps = 10/353 (2%) Query: 19 NLLDLNRQQMREFFKDL--GEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 N+ L + + + +R QV+ W+Y + + ++MT++ + R LK Sbjct: 4 NIFSLMPEDLAKSIISRQPDLPEYRIKQVLSWLYKFYLNEPEKMTNLPEEFRAFLKTNYS 63 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 PE+ + S DG +K+ + + D ++ E+V IP + + TLC+S+QVGCA CKFC+T Sbjct: 64 FFLPEIESKLVSQDGAVKYRLLLEDGKIIESVLIPAEKKNTLCLSTQVGCARNCKFCATG 123 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G RNL EIIGQV A+K + K +G +TN+V+MGMGEP+ NL NV+ A++I+ Sbjct: 124 KMGLIRNLATQEIIGQVIIASKEL---KNSGTAKLTNLVLMGMGEPMDNLKNVLMALQIL 180 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 + GF S RR+T+ST GVVP + L D I LA+SL + R +++P++ +YN+ Sbjct: 181 QSNAGFSFSPRRITVSTCGVVPGIIALADSGIKAKLALSLTSAIQSKRRKLMPVSDQYNL 240 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 A+ YL K++ R+TIEY+++ + N +E L + D CKIN IP+NP Sbjct: 241 IQLKQALLYYLRKTS---FRITIEYILIPNFNMDSEDLAALRKFTGDLSCKINFIPYNPG 297 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 +P+ + + I F + +RK+RG DI ACGQL + + K Sbjct: 298 RNSPFRAPTETEIKDFMQRAQKLPQAITLRKSRGADIFGACGQLTKNNLGEKK 350 >UniRef50_B0MQA1 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQA1_9FIRM Length = 345 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 108/350 (30%), Positives = 180/350 (51%), Gaps = 19/350 (5%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQ---VMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 ++ L +Q + + G FRA Q + + +Y FDEMT + ++ L + Sbjct: 3 DIYSLTYEQAEKLLTENG---FRATQCANIFRDIYKRRASGFDEMTLTSADIKAFLSDKY 59 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCST 134 ++ E +S D T K+ + D RVETV + + ++C+S+Q GC + CKFC + Sbjct: 60 FFGKLKIDEILQSVD-TSKYLFELSDGCRVETVLMRQKFGNSICISTQSGCNMGCKFCCS 118 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + R+L E++ Q+ K I N+ +MG+GEP N + + ++I Sbjct: 119 GRLRKQRDLTAGEMVSQILAVEKHQNIT-------IGNITVMGIGEPFDNYDALCDFLDI 171 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + G + +T+ST G+ + LA+SLHAP+DEIR+ ++P+N++Y+ Sbjct: 172 VTVPGGIETGTKHITVSTCGLCDKTKLFAERKEPCNLAVSLHAPDDEIRNRLMPVNRRYS 231 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I + + + Y+E++N +V +EY++LD +ND E+A QLA L+ + +NLIP+NP Sbjct: 232 ISQVIESAKYYVERTNR---KVLLEYILLDGINDSRENARQLAALIGNARLFVNLIPYNP 288 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 P + + RSS I F L RK G ++ AACGQL D I Sbjct: 289 SPDSEFKRSSEENITAFYDELKKNRINVTRRKEFGTELSAACGQLRSDRI 338 >UniRef50_D1N5Y0 Radical SAM enzyme, Cfr family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5Y0_9BACT Length = 344 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 172/345 (49%), Gaps = 13/345 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L+ + +RE+ K FR Q+ W+Y + M ++ +R + Sbjct: 6 LVGTSPAVLREWAKSHDLPAFRGTQIADWVYKKGIVEPERMNNLPLPVRELIGNEFLAPG 65 Query: 80 PEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG 138 V E S DGT K + + D +E V IP ++R T C+S+QVGC ++C+FC++ + G Sbjct: 66 TAVTETAGSGDGTEKLLLTLQDGETIEMVLIPAEERLTFCLSTQVGCPVQCRFCASGRDG 125 Query: 139 FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 RNL EI+ + R N+V MG+GE LLN + +E++ Sbjct: 126 LIRNLAAGEILEEFLLGC-------SRAGRRPDNLVFMGIGEGLLNFRELAATLEVLSSP 178 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETF 257 GFG+S RR+T+STSG VP + K ++ + LAISLHAP+DE R ++P +Y + Sbjct: 179 EGFGMSPRRITVSTSGYVPGMLKFAELEREFTLAISLHAPDDETRSRLIPDKLRYPVAEI 238 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGA 317 +AA YL K+ VT+EY +L+ ND HA L L CK+NLIP+N G Sbjct: 239 MAAADLYLRKAGR---MVTLEYTLLEGFNDTPPHARALGALAVRHRCKVNLIPYNST-GG 294 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 + R S I F + + + G VR RG AACGQL Sbjct: 295 EFRRPSRQAIREFEETVAAAGAHVTVRVERGAKSVAACGQLRTRA 339 >UniRef50_D1VSE2 Radical SAM enzyme, Cfr family n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE2_9FIRM Length = 348 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 185/348 (53%), Gaps = 15/348 (4%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L + +++++ EK FRA+Q+ + + + + ++++K L+ EI Sbjct: 3 LNSMYLDELKDYLSSKSEKSFRANQLYTFFHKNKRWDIEN-SNLSKSTLKILQND-EINT 60 Query: 80 PEVVEEQRSS-DGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 ++++ +S D T K+ + D +E V + + C+S+QVGC + C FC++ + Sbjct: 61 IKILKIFQSKLDDTKKFLFTLDDSNVIEGVLMKYSFGYSQCISTQVGCRMGCAFCASTKD 120 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G RNL +E++ QV+ G + N ++MG GEPL N +NV+ ++I+ Sbjct: 121 GLFRNLTPAEMLNQVYIVENYFGIN-------VKNFILMGSGEPLDNFDNVIKFLKILHS 173 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 G S R +T+ST GVV + KL D + + LA+SLH ND R +I+PIN+KYN+ Sbjct: 174 KEGHNTSYRNITISTCGVVDGIYKLIDSALPINLAVSLHQTNDLERSKIMPINRKYNLNK 233 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 A+ Y K+ + R+T EY ++ ND ++ ++L E+ ++ C INLIP NP Sbjct: 234 LKKALEDYNLKT---KNRITFEYTLIKGKNDTLKNVNELKEMFQNLFCHINLIPLNPIEE 290 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 R + I++F ++L F VR+ G DIDA+CGQL ++ Sbjct: 291 YNEQRPNRQDINKFKRLLEDASFNVTVRRELGSDIDASCGQLRASLLR 338 >UniRef50_A8I3K8 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I3K8_CHLRE Length = 368 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 123/364 (33%), Positives = 180/364 (49%), Gaps = 35/364 (9%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFDEMTDINKVLRGKLKEV 74 ++ L +L ++ E+ +GE P RA Q+ +W+Y N D+ G K Sbjct: 1 RVMLKNLPLPELEEWCASVGEPPKRAKQLYRWLYGNRKWIRNLDQADSDASAFSGAFKAK 60 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAV------GDQ-------RVETVYIPEDDR------A 115 ++ + DGT K A+ GD VETV IP +R Sbjct: 61 VLAGGLQLQSVHTARDGTRKLVFALVGDWEGGDGPAGSARGTVETVLIPMTNRQGQNLRY 120 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 T C+S+QVGCA+ C+FC T + G NL ++I+ QV A + + +V Q PI N+V Sbjct: 121 TACLSTQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRYLAEQEV--QIPIANIVF 178 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLH 235 MGMGEPL N + V+ A+EI+ G LS+ ++ +ST G+VP + + LA+ Sbjct: 179 MGMGEPLHNYDAVMSAIEILA--TGLELSRNKIIVSTVGLVPEMRRFIASGRAKLAV--- 233 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRR-YLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 RD IVP N++Y ++ L A+R + V IEYV+L VND A + Sbjct: 234 ------RDWIVPTNRRYPLDQLLGALREAFPYGKRKGDDFVVIEYVLLAGVNDTLADAER 287 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 L L D C +NLI +NP G + RSS+ + F V ++ G VR ++GDD AA Sbjct: 288 LLALTSDIYCLVNLIVFNPHDGTQFKRSSDDDVRAFRAVFLAAGRPCTVRASKGDDEMAA 347 Query: 355 CGQL 358 CGQL Sbjct: 348 CGQL 351 >UniRef50_B1H070 Ribosomal RNA large subunit methyltransferase N n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RLMN_UNCTG Length = 350 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 126/353 (35%), Positives = 211/353 (59%), Gaps = 18/353 (5%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 ++ K +LDLN Q K + E+ +R +Q+++W+Y +F+ T+I K LR KL E Sbjct: 6 QNYKKYILDLNDAQFNRAVKPIIEQDYRINQIIEWIYAKKAVSFESFTNIPKELRNKLDE 65 Query: 74 VAEIRAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKF 131 +R ++V++++S D TI++ D++ V++P + + ++C+SSQ+GC + C F Sbjct: 66 KFFLRTLKIVKKEKSLIDSTIRYTFRTADKKYFFAVFLPANGKNSVCISSQIGCPIMCAF 125 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 CS+ + RNL EII Q+ + + I+ ++ MGMGEP+LN NN++ Sbjct: 126 CSSGKTKLARNLSRGEIIEQILQVEN-------DTKEKISGILFMGMGEPMLNFNNLISV 178 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINK 250 + +L FG+ KR +T+S+ G+VPA+ KL D V LA+SLHA ++ R ++VP N Sbjct: 179 LNSLLSSKEFGIGKRHITVSSVGIVPAVKKLADDNFGVRLALSLHAVDERQRKKLVPDNL 238 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-----DTPCK 305 ++IE L A + YL+K+N++ +TIEYV++ +N + AH+LA LLK ++ + Sbjct: 239 GFSIEDILKAGKYYLKKTNSH---LTIEYVLVKGINISSADAHKLARLLKRCDLINSDVQ 295 Query: 306 INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +NLIP+NP + R I++F +L G T VR+++G +I+AACGQL Sbjct: 296 VNLIPFNPVTDVQFQRPDKKSINKFKSILKLNGITVNVRQSKGANINAACGQL 348 >UniRef50_C7M235 Radical SAM enzyme, Cfr family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M235_ACIFD Length = 353 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 128/348 (36%), Positives = 190/348 (54%), Gaps = 17/348 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ +L+R +R +R +Q+ +YH + ++ + +R +L + Sbjct: 3 SVYELDRAAVRALVP---WPDWRIEQLFHGLYHEGQR-LEAISTLPARMRAELASHLDPG 58 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 E E T+K+A+ D VETV + R ++CVSSQ GCA+ C+FC+T Q Sbjct: 59 LTERRREHADDGETVKFALEAADGALVETVVMQSARRISVCVSSQAGCAMGCRFCATGQA 118 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF R+L V EI+ Q+ A + V R +T+VV MGMGEPL N + + A+ + Sbjct: 119 GFVRHLGVGEIVEQLAIAQRSVR------PRRLTHVVFMGMGEPLANASVAIEAIRRIRA 172 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 D FG+S RRVT+ST G+VP + +L + V LA+SLHA ND R ++VP+N++Y I+ Sbjct: 173 D--FGISPRRVTVSTVGIVPGIRRLAHADLGVTLAVSLHAANDAARSDLVPMNRRYGIDA 230 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A + + E + RVT+E+ ++ VND A +LA + +NLIP NP PG Sbjct: 231 VLDAAQEFSELTGR---RVTLEWALIAGVNDRDRDATELAGHARRLAAHVNLIPLNPTPG 287 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 P + + RF++ L S G VR TRG IDAACGQLA DV Sbjct: 288 YPMVGTDPDGVARFARRLRSLGVNVTVRDTRGRSIDAACGQLAADVAR 335 >UniRef50_B3DX07 Radical SAM family enzyme n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX07_METI4 Length = 314 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 113/310 (36%), Positives = 176/310 (56%), Gaps = 21/310 (6%) Query: 80 PEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD------RATLCVSSQVGCALECKFC 132 E++ E++S DGT K+ + D +ETV IP D R TLCVS+QVGCAL C FC Sbjct: 1 MELIHEKQSIDGTKKFLWQLCDGHAIETVLIPATDSRGSSERLTLCVSTQVGCALGCHFC 60 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL EI+ QV + IV ++ ++++V MGMGEPLLN + ++ ++ Sbjct: 61 ASGLLGFKRNLSCGEIVEQVLLSESIV-------KQRVSHIVFMGMGEPLLNYDQLIKSI 113 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 ++ +G G+S R++T+STSG+ P + KL + + LA+SLHA DE+R +I+PIN K Sbjct: 114 RLISSSWGIGISPRKITISTSGIAPRIRKLALETLPFRLAVSLHATTDELRSKIMPINSK 173 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + + + + + ++T+EY+++ +ND E A +LA + K+NLIP+ Sbjct: 174 YPLSELIKSCEEFCS---RRKQKITLEYILISGLNDRREDAERLARIATSLRAKVNLIPY 230 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI-DRTKRTL 370 NP + F + L + +RK RG DID ACGQL + +R+K Sbjct: 231 NPIERLAWKSPDQKEQLSFFRWLKNKAVQVSIRKERGRDIDGACGQLRLRYLFERSKEP- 289 Query: 371 RKRMQGEAID 380 K M GE ++ Sbjct: 290 -KGMLGEGLN 298 >UniRef50_B2KDX7 Radical SAM enzyme, Cfr family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDX7_ELUMP Length = 343 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 185/351 (52%), Gaps = 15/351 (4%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +N +++++F K+ G +R QV +Y ++++ + L+ KLK+ I + Sbjct: 1 MNFEKIKDFIKENGFPAYRIAQVKDAVYKNGITDWNKAVALPADLKNKLKDNFNILSFTA 60 Query: 83 VEEQRS-SDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 + Q S D T K + + D ++ETV + D T+CVS+QVGC + C FCST + F Sbjct: 61 AKMQFSDKDRTAKALLKLEDGLKIETVLMRMGDVWTVCVSTQVGCPVGCSFCSTGKMRFK 120 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 R+L EI QV + K+ + I NVV MGMGEPL N N V A++ + + Sbjct: 121 RDLTDEEISDQVLFWLSYIKQEKLA--QRINNVVFMGMGEPLFNYLNTVKAVKEISNPDR 178 Query: 201 FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 G+ R +++STSGV L D+ V LA+SLH+ +D+ R++IVP+N+K+N+ET Sbjct: 179 LGIGMRHISISTSGVADKFHNLAVDLPQVNLALSLHSADDDERNKIVPLNRKFNLETLQK 238 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP----CKINLIPWNPFP 315 A+ Y+ + +V IEY +++ VND EH L + + +NLI N Sbjct: 239 ALTEYIAMTGR---QVFIEYTVVEGVNDRPEHIRLLGKWISGVKDNYLLHVNLIACNMGK 295 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 G +S ++ F+K L + +RK+ G+DI AACGQLA Sbjct: 296 G---KTTSEKQVKLFAKGLQGLHISVTIRKSLGNDILAACGQLAVKESKEK 343 >UniRef50_C1E6J0 Predicted protein n=2 Tax=Micromonas RepID=C1E6J0_9CHLO Length = 395 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 139/364 (38%), Positives = 182/364 (50%), Gaps = 26/364 (7%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMY-HYCCDNFDEMTDINKVLRGKL-KEVAEI 77 LL L ++RE + +R Q+ +Y + M + R L E Sbjct: 42 LLGLGLDELRELSAEFALPQWRGQQIHDAIYGEMRKTTIEGMQQLPLGFRQALVDAGYET 101 Query: 78 RAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIP------EDDRATLCVSSQVGCALECK 130 E VE DGT K + +E V IP R T+CVSSQVGCA+ C Sbjct: 102 GRREPVEIVSDEDGTRKALFELRCGSIIEAVGIPVERAKGRRRRFTVCVSSQVGCAMRCS 161 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+T +QGF RNL EI+ QV + G R TNVVMMGMGEPLLNL V+ Sbjct: 162 FCATGRQGFRRNLTSDEIVNQVLSMEDVFG-------RRATNVVMMGMGEPLLNLREVLR 214 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPIN 249 A + D G + R T+ST GV AL KL + LA+SLHAP E+R+ ++P Sbjct: 215 AHRCLNRDVG--IGGRYFTISTVGVPNALSKLAAHRLQATLAVSLHAPTQELRERLIPSA 272 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK---DTPCKI 306 K + ++ L VR Y + + RVT EY +L ND +HA LA+LL+ C I Sbjct: 273 KAFPLDALLEEVRMYRKATGR---RVTFEYTLLAGENDSEDHARALAKLLRSKVGRGCHI 329 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVL-MSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 NL+PWNP GA + R S S ++RF VL G + VR TRG AACGQL G + Sbjct: 330 NLLPWNPVAGANHQRPSKSAVNRFCDVLAAERGVSYSVRATRGLVAQAACGQLTGAFERK 389 Query: 366 TKRT 369 + R+ Sbjct: 390 SSRS 393 >UniRef50_C8PSX7 Radical SAM enzyme, Cfr family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSX7_9SPIO Length = 348 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 174/343 (50%), Gaps = 17/343 (4%) Query: 22 DLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPE 81 + +++ + F++ Q+ +W+ C +F EMT++ R +L V R Sbjct: 16 GMLPEEIATVCNL--PQRFQSVQIFQWI-ARGCTSFAEMTNLPLKERERLASVYTPRNTV 72 Query: 82 VVEEQRSSDGTIKWAIAVGDQR-VETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQGF 139 + DGT+K I + D +ETV + + +R T CVS QVGC + C FC T Q G Sbjct: 73 CETVLKDPDGTVKLGIGLYDGSSIETVLLFDKHERRTACVSCQVGCPMGCTFCQTGQLGC 132 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL +EI+ Q KI G + N+V MGMGEPLLNL+++ + ++ Sbjct: 133 LRNLSPNEIVEQFLHLEKICG--------KLDNIVFMGMGEPLLNLDSIAKTIAVLTHPK 184 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G LS RR+TLSTSG+ + +L + +D+ LA+SL ++ +R ++P+ K + Sbjct: 185 GRNLSHRRITLSTSGICKGIYELAERQLDIRLAVSLTTADEALRTTLMPVTKANPLSELK 244 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 A+R + +K+ RVT+E +L VN + A Q+ + + INLIPWNP P Sbjct: 245 KAIRYFNDKT---DKRVTLELALLKDVNTSYKAAQQVRDFAEGLNVHINLIPWNPVQQLP 301 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 Y S+S I F L + VR+ RG I ACGQL Sbjct: 302 YSTPSDSEIRSFYNYLTAENLNVTVRQKRGRTIGGACGQLGKK 344 >UniRef50_B1C5S5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S5_9FIRM Length = 342 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 186/351 (52%), Gaps = 17/351 (4%) Query: 19 NLLDLNRQQMREFFKDL-GEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 NL LN +++ + + E FRA Q+ KW+Y + DEMT+++ LR KLKE I Sbjct: 3 NLFGLNLEEIEKIIVEEYKEPKFRAKQIFKWLYDSYVKSIDEMTNLSLSLREKLKEEYYI 62 Query: 78 RAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 ++ ++ + T K+ + D +E V + + ATLCVS+Q GC + C FC + Sbjct: 63 NHLKLEKKFKEEKSSTTKFLLKTEDDILIECVLLRYEAGATLCVSTQAGCRMGCVFCESG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G RNL EI+ +++ ++I I+N+V+MG GEPL N + VV ++++ Sbjct: 123 KCGLIRNLTKGEILNEIYLVSEIEDI-------RISNIVLMGSGEPLDNYDEVVGFLKLV 175 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D +SKR +TLST G+ + L D +D+ LA+SLHAP E+R+ ++PI K NI Sbjct: 176 TDVNTLNMSKRSITLSTCGIKDKIYSLADSGLDINLALSLHAPFHEMRESMMPIEKANNI 235 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L A Y K+ R+T EY +++ ND E +L +L K T IN+I N Sbjct: 236 EEVLDATFYYRSKTGR---RITYEYCLIEGKNDTIECIDKLYDLFKGTDSLINVIGVN-- 290 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 + R ++ I F L + G +R+ G I+AACGQL ++ Sbjct: 291 -DSSKKRVNDKYIHAFVDKLRNKGINVTIRRRLGSSINAACGQLKSRYLNE 340 >UniRef50_B1ZQZ5 Ribosomal RNA large subunit methyltransferase N 1 n=3 Tax=Verrucomicrobia RepID=RLMN1_OPITP Length = 355 Score = 373 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 123/353 (34%), Positives = 181/353 (51%), Gaps = 15/353 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 + +L +L+ + G K A +V++ Y C + + L +L+ Sbjct: 2 RPSLAELSVDDLASVLAQWGYKRSHAGRVLREYYARCGELTEAGRPWPAGLLERLRIEFA 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIP--EDDRATLCVSSQVGCALECKFCS 133 + Q ++DGT K + + D R VE V +P DRA C+SSQVGCA+ C FC+ Sbjct: 62 PGGTALAARQVAADGTTKLLLRLADGRTVEAVLMPDYRADRAAGCLSSQVGCAMGCDFCA 121 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 TAQ GF RNL E++ Q + + R + VV MGMGEPLLNL+ V+ A+ Sbjct: 122 TAQSGFERNLTAGEMVEQFLALRR----EAASAGRKLQTVVFMGMGEPLLNLDAVLTAVR 177 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKY 252 + D+ GL R+VT+ST G+VP +D L + + LA+SLHAP+D R ++P +++ Sbjct: 178 RIADNTYGGLGWRQVTVSTVGLVPGIDALTAADLGINLAVSLHAPDDATRAALLPAGRRF 237 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 I LAAV R+ V I+Y +L VND HA LA ++ +NL+ +N Sbjct: 238 AIADILAAVDRFQASRGRP---VIIQYCLLKGVNDSAAHARMLAAVIGSRRMHVNLLHYN 294 Query: 313 PF----PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P G Y S + +F L + G T +R++RG DIDAACGQL Sbjct: 295 PTGLSLRGVRYEPSGDEAAAQFLAELRARGVVTHLRRSRGPDIDAACGQLRAK 347 >UniRef50_A4RXU8 Predicted protein n=2 Tax=Ostreococcus RepID=A4RXU8_OSTLU Length = 369 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 130/369 (35%), Positives = 195/369 (52%), Gaps = 31/369 (8%) Query: 19 NLLDLNRQQMREFFK-DLGEKPFRADQVMKWMY-HYCCDNFDEMTDINKVLRGKL-KEVA 75 +LL ++ + ++ + G+ +RA Q+ + +Y C ++ + I + +R L Sbjct: 12 DLLGMSARALKSIVVDECGQPLYRATQIREHLYGARRCRRIEDFSLIPREMRDALVAGGY 71 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPE----------DDRATLCVSSQVG 124 V S GT K ++ VG+ + +E V IP+ ++R T CVSSQVG Sbjct: 72 RTGRLAVESASVSGCGTGKVSLRVGEREVIEAVGIPDASCWRASAEAENRLTACVSSQVG 131 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 CA++C FC+T QG+ RNL +EI QV ++ G + ++ VV MGMGEP+LN Sbjct: 132 CAMKCTFCATGMQGYKRNLTPAEITAQVIELEELYG-------KRVSQVVFMGMGEPMLN 184 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRD 243 + +VV A+ + +D G + R +T+ST G+ +L KL + + + LAISLHAP+ R Sbjct: 185 IKSVVQAIRCLNEDVG--IGGRHITVSTVGIPNSLKKLAKEKLAITLAISLHAPDQHTRA 242 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--- 300 +IVP K Y +E L R Y +++ RVT EY +L VND A L+ +LK Sbjct: 243 KIVPSAKYYPMEDLLNDARAYFKETGR---RVTFEYTLLAGVNDSPSQAKALSRMLKRKF 299 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 T +N+IPWN G + R S + I RF L G T +R+TRG D +AACG L G Sbjct: 300 GTGAHVNIIPWNNIDGINHTRPSGNAIHRFCAQL-EGGVTHTIRRTRGLDTNAACGMLTG 358 Query: 361 DVIDRTKRT 369 RT R Sbjct: 359 AFERRTLRA 367 >UniRef50_C0QD94 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QD94_DESAH Length = 342 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 108/351 (30%), Positives = 186/351 (52%), Gaps = 17/351 (4%) Query: 18 INLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 +NLL++ +++ + G + A +++ + NF + + L V++ Sbjct: 1 MNLLEMTFKEVSQLLYNGFGRGDYHAGALLREVIKRGNHNFSTAPEFERSQGMSLALVSD 60 Query: 77 IRAPEV-VEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCST 134 P+ V +Q D T+K+ + D +E+V IP TLCVS+Q GC + C+FC T Sbjct: 61 YELPDFTVVDQMEEDNTVKFVTRLHDGCSIESVIIPMKQYNTLCVSTQAGCRMGCRFCET 120 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 A+ GF RNL+V EI GQ++ A +G + I+N+V MGMGEP N +N+V ++ + Sbjct: 121 ARSGFKRNLQVHEITGQLFSARNTLG-------KKISNIVFMGMGEPFDNFDNLVRSIRV 173 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLG--DMIDVALAISLHAPNDEIRDEIVPINKKY 252 D GF ++ R +T+ST G+VP + L + ++LA+S+H+ DE+R ++P+N++Y Sbjct: 174 FNDQKGFDVAFRHMTVSTCGLVPGIRALAGLGLTQLSLAVSVHSAIDEVRSVLMPVNRRY 233 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 + AA+ Y + + +EYV++ VND E A L + L ++NLI +N Sbjct: 234 PLNVLRAALADYPLH---KRRYILVEYVLIKGVNDSQEAAAALVQYLVPLKVRVNLIAYN 290 Query: 313 PF--PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P P + + +++F+ L G I R ++G + A CGQL+ Sbjct: 291 PGRDPDPEFQGVDDCSMNQFASWLEDSGLFVIKRWSKGQKLMAGCGQLSTR 341 >UniRef50_A9V4C5 Predicted protein n=2 Tax=Fungi/Metazoa group RepID=A9V4C5_MONBE Length = 1527 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 124/359 (34%), Positives = 190/359 (52%), Gaps = 42/359 (11%) Query: 33 KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGT 92 + LG ++ + + H N ++ ++ K L ++E + +V+E+ S+D T Sbjct: 592 RQLGIADDHVWRMWRAILHNGVTNVRDIPELPKKLYQVIEEKFALTTSRLVKEETSADNT 651 Query: 93 I-KWAIAVGDQ-RVETVYIPED-------------------------DRATLCVSSQVGC 125 K I + D ++ETV + +RAT+CVSSQVGC Sbjct: 652 TTKLLIELQDGAQIETVIMRYGRFELRNFPEDAQKKSSDGEVSFVSKERATVCVSSQVGC 711 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 + C FC+T G NL EI+ Q++ A ++ I NVV MGMGEPL N Sbjct: 712 QMGCTFCATGTMGLMSNLAAGEILEQLYHANQV---------EKIRNVVFMGMGEPLDNY 762 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDE 244 + V A+ M D F L ++++ST GVVP + ++ + M DV LA+SLHAPN E+R+E Sbjct: 763 DAVRFAVSAMTDVRRFSLGASKISVSTVGVVPRIHQMVEDMPDVGLALSLHAPNQELREE 822 Query: 245 IVPINKKYNIETFLAAVRRY----LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 IVP + ++++ + A+ + E S + + IEYV++D VN E AHQL LLK Sbjct: 823 IVPSGRSWHLDRIMEAIDHFQETRQETSRRRRTHILIEYVLIDEVNSTEEVAHQLGHLLK 882 Query: 301 DTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 D +N+IP+NP Y S + DRF++++ SYG TI+R+ G D++AACGQL Sbjct: 883 DRDVLVNVIPYNPTDVPHDYKPPSRATTDRFNEIVRSYGLRTIIRQELGQDVNAACGQL 941 >UniRef50_D1R7C7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7C7_9CHLA Length = 364 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 189/356 (53%), Gaps = 18/356 (5%) Query: 16 GKINLLDLNRQQ-MREFFKDLGEKPFRADQVMKWMYHYCCDNFD-EMTDINKVLRGKLKE 73 KI++L + + + LG+ A + + + N + + +R + E Sbjct: 3 EKISILAHTEESFIHAIAERLGKGRVHASLIYQEFFRSGSLNAAHPAFNNAQEIRTAILE 62 Query: 74 VAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKF 131 + + + + DG T K+ D VE V IP TLC+SSQVGC + C F Sbjct: 63 NVSVSQLSLGDRKE--DGKTGKFLGKTADGLEVEFVQIPMQSGGTLCISSQVGCQMGCAF 120 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C T + G RNL EI+ QV+ A K Q N+V MGMGEPL N + V+ A Sbjct: 121 CETGKMGLLRNLTTEEIVSQVYLA-------KHHNQFSFRNLVFMGMGEPLDNFDAVMQA 173 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID--VALAISLHAPNDEIRDEIVPIN 249 + I D GFG +RR+T+STSG V +DKL ++ LA+S++AP DE+R+ ++P+N Sbjct: 174 VRIFNDPKGFGFGRRRMTISTSGCVDGIDKLANLGGQAPNLAVSINAPTDELRNRLMPVN 233 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 +KY+++T A++ Y K+ ++ I YV+L ND EHA QL+E LK KINLI Sbjct: 234 RKYDLQTLYEAMQGYCTKTGR---QILIAYVLLQGQNDQIEHALQLSEYLKGLNVKINLI 290 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 P+NP + + I+ F++ L G+ T++R T+G DI AACGQL + + Sbjct: 291 PYNPQSRDRFQAPDLNTIEAFTQSLRQKGYYTLLRLTKGQDIMAACGQLGNLKLRK 346 >UniRef50_B9EX01 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9EX01_ORYSJ Length = 363 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 124/355 (34%), Positives = 169/355 (47%), Gaps = 54/355 (15%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE-IR 78 LL L+ +R+ DLG++ +R Q+ +Y E + + KV R L + Sbjct: 36 LLGLSEPDLRQLAVDLGQQSYRGKQLHDLLYKSRAKQIQEFSHVPKVFREALVGAGWKVG 95 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----RATLCVSSQVGCALECKFC 132 V +SDGT K + + D R +ETV IP DD R T CVSSQVGC L C FC Sbjct: 96 RSPVHHAVTASDGTTKILLKLEDNRLIETVGIPVDDDKGPSRLTACVSSQVGCPLRCSFC 155 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T + GF RNL EI+ QV + Q +TNVV MGMGEP+LNL +V+ A Sbjct: 156 ATGKGGFARNLHAHEIVEQVLAIEETF-------QHRVTNVVFMGMGEPMLNLKSVLEAH 208 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 + + + +R +T+ST GV + KL + LA+SLHAPN ++R+ IVP Sbjct: 209 RCLNKE--LKIGQRMITISTVGVPSTIKKLASHKLQSTLAVSLHAPNQKLRETIVPT--- 263 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--DTPCKINLI 309 +ND EHA +LAELL +NLI Sbjct: 264 --------------------------------GINDAKEHAEELAELLHTCGGGYHVNLI 291 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 P+NP G+ Y R + F L + T VR+TRG D +AACGQL + Sbjct: 292 PYNPIQGSEYKRPYRKVVQAFVDALEARKITVSVRQTRGLDANAACGQLRNEFQK 346 >UniRef50_Q01GU0 Radical SAM domain-containing protein-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01GU0_OSTTA Length = 406 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 115/363 (31%), Positives = 168/363 (46%), Gaps = 48/363 (13%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC---CDNFDEMTDINK 65 + DG ++LL L ++++ + G FR Q+ +Y + DE T ++K Sbjct: 78 RAKASADGGVSLLGLTKRELEALAVERGMPKFRGKQMADHLYAANGTSARSVDEFTTLSK 137 Query: 66 VLRGKLKEVA-EIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVG 124 LR +L + V ++DGT K + + D RV Sbjct: 138 ALRAELVAAGVRVGRSSVHHVAAATDGTAKLLLRLDDDRV-------------------- 177 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 GF RNL EI+ QV + G +TNVV MGMGEPLLN Sbjct: 178 ---------VETGGFARNLAPHEIVDQVLALEEHFGQ-------RVTNVVFMGMGEPLLN 221 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRD 243 + NV+ A E++ + G+ R +T+ST GV +++KL + LA+SLHAPN E+R+ Sbjct: 222 VPNVLKAHEVLNKE--IGIGARHITISTVGVRGSIEKLAYAQLQSVLAVSLHAPNQELRE 279 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KD 301 I+P K Y +E L +Y + RVT EY +L VND EHA +L LL ++ Sbjct: 280 TIIPSAKVYPMEDLLQDCEQYFIATGR---RVTFEYTLLGGVNDQPEHAKELGRLLYARN 336 Query: 302 TPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 +NLIP+NP A + R S + + F VL +R+TRG + AACGQL Sbjct: 337 LASHVNLIPYNPVDDADFKRPSRATVYAFRDVLEQERVPASIRQTRGLEAAAACGQLRNA 396 Query: 362 VID 364 Sbjct: 397 YQK 399 >UniRef50_C1EAY2 Predicted protein n=3 Tax=Eukaryota RepID=C1EAY2_9CHLO Length = 485 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 129/377 (34%), Positives = 180/377 (47%), Gaps = 34/377 (9%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFR---ADQVMKWMYHYCCDNFDE--------- 59 K + +L D R + F +D G P R A + + + H + + Sbjct: 4 ARKLTRTSLFD--RSALVAFLED-GLGPKRKDAAAKHCRAILHAAVRDAEAGLDAVNLSE 60 Query: 60 --MTDINKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDD-R 114 + I K R ++ E + + + Q S DG T K + + D RVE+V + D R Sbjct: 61 SRVPGIPKFARDQIPERFALITTTIADCQTSKDGSTTKMVVELQDGHRVESVVMRHDKGR 120 Query: 115 ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ------- 167 TLCVSSQVGC + C FC+T G NL EI+ Q+ A ++ Sbjct: 121 VTLCVSSQVGCKMGCTFCATGTLGELGNLTSGEILEQLVHANRLFNDDGTGAGLRRVSGT 180 Query: 168 -RPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDM 225 + N+V MGMGEPL N + VV A+ M D F L+ RVT+ST GVVP + +L D Sbjct: 181 AHGVRNLVFMGMGEPLNNYDAVVGAIGPMTDPNAFALAPSRVTVSTVGVVPKMRRLVRDA 240 Query: 226 IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHV 285 V LA+SLHAPN +R++IVP Y + L+A+ YL + + R IEY +L V Sbjct: 241 PGVCLALSLHAPNQRLREKIVPTATAYKLPDILSALDEYL--ATGPKVRTMIEYCVLGGV 298 Query: 286 NDGTEHAHQLAELLKDTPCKINLIPWNPFPGA-PYGRSSNSRIDRFSKVLM--SYGFTTI 342 ND TE A +L EL++ +NLIP+NP + + VL + T Sbjct: 299 NDTTECARELGELMRHRDVIVNLIPYNPTATPMGHSPPKMEDVRAMCAVLTGPEFNQFTT 358 Query: 343 VRKTRGDDIDAACGQLA 359 VR G DI ACGQLA Sbjct: 359 VRHEMGQDISGACGQLA 375 >UniRef50_C7GZA9 Radical SAM enzyme, Cfr family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZA9_9FIRM Length = 342 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 99/347 (28%), Positives = 171/347 (49%), Gaps = 19/347 (5%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 +L +N +++ LGEK +RA Q+++ + + D+ D++ I+K R KL I Sbjct: 3 SLAGMNLKEIESVVLSLGEKAYRAKQILEAV-NNGVDSIDKIHTISKDFRAKLSNKYTIS 61 Query: 79 APEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 + V ++ S DG+IK+ + D + +E + + +LC+SSQ GC + C FCS+ + Sbjct: 62 SITVEKKLVSKRDGSIKYLLKTSDGKFIEAMSMVYKHGVSLCISSQAGCRMGCTFCSSGK 121 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 +G RNL E+I QV + G I+ +V+MG GEP N + + ++ + Sbjct: 122 EGLERNLSAFEMIEQVLILKR--------GFDKISGIVVMGTGEPFDNYDELKKFLKRIT 173 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIE 255 ++ + KR +T+ST G+ + K + LA SLHA +++IR +I+P N K +++ Sbjct: 174 NEEFLRIGKRHITVSTCGIEEGIKKFSKDFRSINLAFSLHAASNDIRKKIMPGN-KLSVD 232 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + + + + RVT EY+++ VND L LK C +NLI N Sbjct: 233 DIIGLASEHAKITRR---RVTFEYILIKGVNDSMAECELLCRKLKGINCLVNLIRLNGSS 289 Query: 316 ---GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 + + ++ L +R+T G+DI ACGQL Sbjct: 290 YEGDNRFSSPDMKTVKQWQNELEKRHIQVTIRRTIGEDIQGACGQLR 336 >UniRef50_A8I8N2 Predicted Fe-S-cluster redox enzyme n=1 Tax=Chlamydomonas reinhardtii RepID=A8I8N2_CHLRE Length = 502 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 117/388 (30%), Positives = 182/388 (46%), Gaps = 53/388 (13%) Query: 13 TKDGKINLLDLNRQQMREFFKDLGE--KPFRADQVMKWMYH-----YCCDNFDE----MT 61 + G++ L L ++ + GE RA Q+ +WMY + +E Sbjct: 88 DQQGRLVLKALTLPELEAWCAAQGEAAPANRALQIWRWMYADPPAGSWVRSLEETMGRQN 147 Query: 62 DINKVLRGKLKEVAEI-RAPEVVEEQRSSDGTIKWAIAV-----GDQRVETVYIPEDDRA 115 K+ + ++ + R+SDGT K + +ETV IP Sbjct: 148 GFAAKFVEKVGPHVSLEGGLKLSQVVRASDGTRKLVFTLLGGEAAGGSIETVLIP----- 202 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 VGCA+ C+FC T + G NL ++I+ QV A + + + P+TN+V Sbjct: 203 ------VVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRFLAQE--GDRTPLTNLVF 254 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLH 235 MGMGEPL N V+ A +I+ G +S ++T+ST G+VP + + V +A+SLH Sbjct: 255 MGMGEPLHNTEAVLAAADIVSHYLGLHISHNKITISTVGLVPEMRAVLARTRVQVALSLH 314 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEK-----------------------SNANQ 272 A DE+RD IVP+N++Y++ T AA+ K S+ Sbjct: 315 ATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEEEAAIGSLSSSDEAAAAAAGKGSSKEG 374 Query: 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSK 332 + +EY ML +ND + AH+LA++L+ CK+NLI +NP G + S++ I F Sbjct: 375 RSLLVEYTMLHGINDTLDDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRS 434 Query: 333 VLMSYGFTTIVRKTRGDDIDAACGQLAG 360 L+ G +R +RGDD AACGQL Sbjct: 435 ALIRSGMVCTIRDSRGDDEMAACGQLGN 462 >UniRef50_A7GH77 Ribosomal RNA large subunit methyltransferase cfr n=26 Tax=root RepID=CFR_CLOBL Length = 344 Score = 363 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 168/341 (49%), Gaps = 23/341 (6%) Query: 28 MREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA--EIRAPEVVEE 85 M++ +L +R +Q+ K ++H DNFD+M + KVLR L + + V Sbjct: 11 MKQIVSNLKLPDYRYEQLTKAIFHQRIDNFDDMHILPKVLRMSLVNEFGKNVSSVIPVFS 70 Query: 86 QRSSDGTIKWAIAVGDQ-RVETVYIPEDDRA-TLCVSSQVGCALECKFCSTAQQGFNRNL 143 Q S K + D R+E V + + C+SSQ GC C+FC+T GF RNL Sbjct: 71 QDSKQA-QKLLFELTDGERIEAVGLKYKQGWESFCISSQCGCGFGCRFCATGSAGFKRNL 129 Query: 144 RVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 EI Q+ + ++ MGMGE N + A++I+ D FGL Sbjct: 130 TADEITDQLLYF--------YFNDHRLNSISFMGMGEAFAN-PELFDAVKILTDQNLFGL 180 Query: 204 SKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 S+RR+T+ST G++P + L V LA SLH+P + R +++PINK++ + + + Sbjct: 181 SQRRITISTIGIIPGIQSLTQKFPQVNLAFSLHSPFESQRSDLMPINKRFPLNQVMKTLD 240 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-----CKINLIPWNPFPGA 317 ++ + RV I Y+ML+ +ND EHA + LLK+ I+LIP+N Sbjct: 241 EHIIHTGR---RVFIAYIMLEGINDSKEHAEAVVGLLKNRGSWEHLYHIDLIPYNSTDKT 297 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + S++ I +F L G + VR G +I AACGQL Sbjct: 298 TFKFQSSNAIKQFCSTLKKAGISATVRTQFGSEISAACGQL 338 >UniRef50_Q6MED6 Ribosomal RNA large subunit methyltransferase N 1 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RLMN1_PARUW Length = 358 Score = 359 bits (923), Expect = 7e-98, Method: Composition-based stats. Identities = 117/356 (32%), Positives = 183/356 (51%), Gaps = 18/356 (5%) Query: 18 INLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 I++L + +LG+ A V + + N + K + L+ + Sbjct: 6 ISILSHTSESYANAISHELGKGFQHAKLVYQEWFRRG--NISGLNPAFKNAQALLQNILS 63 Query: 77 IRAPEVVEEQRS-SDG-TIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFCS 133 + + ++ +DG T K+ I D +++V IP TLC+SSQ+GC + C FC Sbjct: 64 LTDFSFLPISQNLTDGQTGKFLIKTIDDLDIKSVLIPMQAGGTLCISSQIGCQMGCAFCE 123 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 T + G RNL EI+ Q++ A + + N+V MGMGEP N + V+ A Sbjct: 124 TGRMGLLRNLTTQEILSQLFIAKFRLHF-------SVRNIVFMGMGEPFDNYDTVMHAFR 176 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM--IDVALAISLHAPNDEIRDEIVPINKK 251 I+ D GFGL R+T+STSG + + +L LA+SL+APNDE+R++++PINKK Sbjct: 177 ILTDSHGFGLGNNRITISTSGCLEGIYRLLQETTPLPNLAVSLNAPNDELRNKLMPINKK 236 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y ++ A+ + ++++ +V I YV++ ND EHA QL L KINLIP+ Sbjct: 237 YPLKELYQAIYDFCKQTS---KQVLIAYVLIKEQNDSIEHAKQLTNFLSGLNVKINLIPY 293 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 NP + S ++ F+ L GF T++R+T+G I AACGQL + R K Sbjct: 294 NPQSRDRFQSPEQSTLENFTSYLREKGFYTLLRQTKGQKIMAACGQLGNLELKRKK 349 >UniRef50_Q9LJN3 Gb|AAF41683.1 n=13 Tax=Magnoliophyta RepID=Q9LJN3_ARATH Length = 382 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 131/365 (35%), Positives = 188/365 (51%), Gaps = 42/365 (11%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 + +++ F+ G P A Q+ K++ +DE+ + L + + Sbjct: 7 FDASEIKSEFESAGINPKFAIQIWKYVIQNPDCVWDEIPSLPSAAYSLLHSKFKTLTSSL 66 Query: 83 VEEQRSSDGTI-KWAIAVGDQR-VETVYIPEDDRA--------------TLCVSSQVGCA 126 SSDGT K I + + VE V + D R TLC+SSQVGC Sbjct: 67 HSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCISSQVGCK 126 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMM---------- 176 + C FC+T GF NL EI+ Q+ A++I I N+V M Sbjct: 127 MGCTFCATGTMGFKSNLTSGEIVEQLVHASRIAD---------IRNIVFMLLPWFDDCDQ 177 Query: 177 GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLH 235 GMGEPL N N VV A+ +ML+ F LS +R+T+ST G+V A++KL D+ V+LA+SLH Sbjct: 178 GMGEPLNNYNAVVEAVRVMLNQP-FQLSPKRITISTVGIVHAINKLHNDLPGVSLAVSLH 236 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQL 295 AP EIR +I+P + + ++ + A++ + + S Q ++ IEY+MLD VND +HAH L Sbjct: 237 APVQEIRCQIMPAARAFPLQKLMDALQTFQKNS---QQKIFIEYIMLDGVNDQEQHAHLL 293 Query: 296 AELLKDTPCKINLIPWNPF-PGAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDA 353 ELLK INLIP+NP + + SS + RF K+L Y T +RK G DI Sbjct: 294 GELLKTFQVVINLIPFNPIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISG 353 Query: 354 ACGQL 358 ACGQL Sbjct: 354 ACGQL 358 >UniRef50_Q5WJ42 Ribosomal RNA large subunit methyltransferase cfr n=8 Tax=Firmicutes RepID=CFR_BACSK Length = 350 Score = 357 bits (916), Expect = 4e-97, Method: Composition-based stats. Identities = 107/353 (30%), Positives = 174/353 (49%), Gaps = 22/353 (6%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA--EIRAPEV 82 ++++ F L E +R Q+ + ++ + F++MT + K LR L I E Sbjct: 10 YERLKHFLNALNEPTYRYKQITEAIFKHRIGAFNKMTTLPKALRESLINEFGPSILTVEP 69 Query: 83 VEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRA-TLCVSSQVGCALECKFCSTAQQGFNR 141 V E S T G+ +VE V + + + C+SSQ GC L C FCST G + Sbjct: 70 VLETTSQQVTKVLLKVAGNNQVEAVRMHYEAGWESFCISSQCGCGLGCTFCSTGAIGLKQ 129 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 NL E+ Q+ + +V MGMGE L N+ + A+ +++D F Sbjct: 130 NLSADEMTDQLLYF--------YLKGHSLDSVSFMGMGEALANVR-IFDALNVLVDRQLF 180 Query: 202 GLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 LS RR+T+ST G++P + ++ + L SLH+P + R E++PIN KY ++ + Sbjct: 181 ALSPRRITVSTVGIIPNIQRMTSSFPQMNLTFSLHSPFHDQRSELMPINNKYPLDQVMNV 240 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA-ELLKDTP---CKINLIPWNPFPG 316 + +++ ++ +V I YVML VND +HA L +L + +NLI +NP G Sbjct: 241 LDQHIHETGR---KVYIAYVMLRGVNDSEKHAEALVKRILNNRYPHLYHVNLIRYNPTVG 297 Query: 317 AP--YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 P YG++ ++ F +V+ S +R G +IDAACGQL G + + Sbjct: 298 TPENYGQTIEEKLQTFYRVVKSARIPVTIRSQFGREIDAACGQLYGQYQAKKR 350 >UniRef50_B2S216 Ribosomal RNA large subunit methyltransferase N n=3 Tax=Treponema RepID=RLMN_TREPS Length = 340 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 170/342 (49%), Gaps = 17/342 (4%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L L +++++ + FR QV +W+ C +F M+D++ R +L I Sbjct: 7 LSGLLPEEIQKVCAF--AERFRGVQVFRWI-AAGCTDFHAMSDLSSETRARLARACVISD 63 Query: 80 PEVVEEQRSSDGTIKWAIAVGDQR-VETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQ 137 V R DGT+K I + D+R VE V + + R T C+S QVGC + C FC T Q Sbjct: 64 TRVYTTLRDVDGTLKLGIELKDKRRVEAVLLVDQVSRKTACLSCQVGCPMACAFCQTGQL 123 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF RNL SEI+ Q + VG + NVV MGMGEP+LNL+ V A+EI+ Sbjct: 124 GFARNLSASEIVEQFLHLERCVGT--------LDNVVFMGMGEPMLNLDAVCRAIEILSH 175 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 G LS++R+T+STSG + L D + V LA+SL N +R ++P ++ Sbjct: 176 PQGRDLSEKRITISTSGHCRGIYSLADRALQVRLAVSLTTANAPLRARLMPRAAHDSLAK 235 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 +A+R + EKS RVT+E ++ VN HA ++ + +NLIPWNP Sbjct: 236 LKSAIRYFNEKSG---KRVTLELALMRGVNTSERHAQEVIDFAHGLNVHVNLIPWNPVAS 292 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + + F +LM R RG+ I ACGQL Sbjct: 293 IHFETPREVEVAHFEALLMRARIPVTRRYQRGNGIGGACGQL 334 >UniRef50_B0SGA8 Ribosomal RNA large subunit methyltransferase N n=6 Tax=Leptospira RepID=RLMN_LEPBA Length = 353 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 18/352 (5%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L ++++ E LG + +RA Q+ +Y D+ T ++K +R KLKE + Sbjct: 8 LKGKTKKELEEICVSLGLEKYRAAQIYTGIYKSRYTTIDQFTTLSKEVREKLKEHTQYPE 67 Query: 80 PEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDD--RATLCVSSQVGCALECKFCSTA 135 E+ + S DGT K+ VG+ + +E V+IP D R T+C+SSQ+GC L CKFC+T Sbjct: 68 IEIGRDLVSKEDGTRKFTFYVGENKEIEAVWIPSGDGGRKTICISSQIGCTLNCKFCATG 127 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + NL+ +I+ QV + ++VG TN+V MGMGEP+ N +V+ A I+ Sbjct: 128 LLEYKGNLQTWQILDQVLQVERLVGDRA-------TNIVFMGMGEPMHNYFSVMKAAHIL 180 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D FGL R+T+ST+GV +++ + AISL+ PN R ++ +N K+ + Sbjct: 181 RDKDAFGLGALRITISTAGVTTGINRFIENKEPFNFAISLNHPNPNARSSVMDVNDKHPL 240 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNP 313 E + + +R+ + +T EYVM+ VN G ++A +LA++ + CKIN+IP N Sbjct: 241 EKLIDSAKRF---TKELDRAITFEYVMIPDVNMGRDNAERLAKIARSVNKCKINVIPLN- 296 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIV-RKTRGDDIDAACGQLAGDVID 364 + R ++ + F L + I+ R++ G DI+ ACG LA I Sbjct: 297 TDFTGWRRPTDDEVKDFVMHLKAKTTAPILNRRSPGRDINGACGMLALKGIR 348 >UniRef50_A4RV36 Predicted protein (Fragment) n=3 Tax=Viridiplantae RepID=A4RV36_OSTLU Length = 298 Score = 347 bits (890), Expect = 4e-94, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 155/304 (50%), Gaps = 18/304 (5%) Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDGTI-KWAIAV-GDQRVETVYIPE-DDRATLCV 119 + + + L+ + +V E RS DGT K + + G VE + R TLCV Sbjct: 1 LPRAVVDALRANFVLYTTKVRHESRSGDGTTTKMIVELAGGDVVEACVMRHAKGRTTLCV 60 Query: 120 SSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 SSQVGC + C FC+T G NL EI Q+ A++ + NVV MGMG Sbjct: 61 SSQVGCKMGCTFCATGTLGELGNLSAGEICEQLAHASR---------GDAVRNVVFMGMG 111 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPN 238 EPL N NV+ A+E M D GFGLS ++T+ST GV+P + L D LA+SLHAPN Sbjct: 112 EPLNNYRNVIDAIEAMTSDKGFGLSPAKITVSTVGVIPRMRTLRRDAPGTRLALSLHAPN 171 Query: 239 DEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAEL 298 +R +IVP Y +E +A + ++ ++ + + IEY +L VND A +L L Sbjct: 172 QALRQKIVPTATAYKLEDLMATLDEHM--ASGPKMKTMIEYCVLGGVNDDEACARELGAL 229 Query: 299 LKDTPCKINLIPWNPFPG-APYGRSSNSRIDRFSKVLM--SYGFTTIVRKTRGDDIDAAC 355 L+ +NLIP NP A + + + + ++L + T VR G DI AC Sbjct: 230 LRGKEVIVNLIPLNPTDTPAGHVPPTREAVQKMLEILTSPEFDLFTTVRHEMGQDIAGAC 289 Query: 356 GQLA 359 GQLA Sbjct: 290 GQLA 293 >UniRef50_A6DL87 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DL87_9BACT Length = 343 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 124/315 (39%), Positives = 173/315 (54%), Gaps = 13/315 (4%) Query: 56 NFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIPED- 112 + D D K +++ EI +++ Q S DG K + D +ETV + Sbjct: 37 DLDSAFDNPK-FVELVRDHFEIPQLKIISRQDSKIDGASKLLVQTEDGLNIETVILRIGT 95 Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN 172 R +LC+SSQ GC +C FCSTA GF RNL ++EIIGQV A +I+ R + N Sbjct: 96 GRTSLCISSQAGCTEKCTFCSTATLGFKRNLTLAEIIGQVILAGEILRKE----DRKVRN 151 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALA 231 +V MGMGEPL N +NV+ ++EIML GLS +RVT+ST G+ + KL +V LA Sbjct: 152 IVFMGMGEPLRNTDNVLKSLEIMLSSAYMGLSSKRVTVSTIGITDNITKLRHSFPEVNLA 211 Query: 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 +SLHA ND++RD ++PINK + +ET + L G + I+Y+++ +ND E Sbjct: 212 LSLHASNDQVRDILMPINKTFPMETIKETL---LSAQELASGDLMIQYLLIKDLNDSPEQ 268 Query: 292 AHQLAELLKDTPCKINLIPWNPFPG-APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 A +LA LK C INLIP+N G + SS ++ F VL F R + G D Sbjct: 269 AQELAAFLKGINCIINLIPYNDSMGMGNWKCSSEEKMSAFQDVLQESDFQVTRRHSLGRD 328 Query: 351 IDAACGQLAGDVIDR 365 IDAACGQLA + Sbjct: 329 IDAACGQLAAKNQKK 343 >UniRef50_C1E2Q2 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1E2Q2_9CHLO Length = 368 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 117/376 (31%), Positives = 178/376 (47%), Gaps = 51/376 (13%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 L+ ++ F +D G K + ++ F+ D++ L++ + EV Sbjct: 4 LDIDEVERFARDRGIKKSSLRLCYRELFRRGKSTFENAPDVSARDMKLLRDNFTVCTSEV 63 Query: 83 VEEQRSSDGT-IKWAIAVGDQR-VETVYIPEDD--------------------------- 113 VE + + DG+ K + + D + VETV I Sbjct: 64 VETKTTEDGSGAKMVVRLHDGKLVETVVIGHSRSVDDGDGDETRGDGEDADVSDGAKNRV 123 Query: 114 -RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN 172 R T+CVSSQVGCA+ C FC T G NL EI QVW A + G+ + N Sbjct: 124 FRNTVCVSSQVGCAMGCTFCETGTLGLMANLTAGEICEQVWHARNLCGSTG------VRN 177 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALA 231 VVMMGMGEPL N V+ A+ M F + +R VT+ST GV ++ +L D +V LA Sbjct: 178 VVMMGMGEPLDNYEEVLIALRAMTHQAVFDMRQRSVTVSTVGVPASIRRLADDAPNVGLA 237 Query: 232 ISLHAPNDEIRDEIVPIN--KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGT 289 +SLHAP ++R ++P + + ++R + +KS IEY+++D VND Sbjct: 238 LSLHAPTQDLRATLLPSAAGTSHTLGRLTESLRYHRQKSGRG---AMIEYIVIDGVNDSP 294 Query: 290 EHAHQLAELLKDTPCKINLIPWNPFP---GAPYGRSSNSRIDRFSKVL-MSYGFTTIVRK 345 HA +L EL + +NLIP+NP Y ++ ++R + +L +G VR Sbjct: 295 THARELGEL---SGYFVNLIPYNPTDVGGTHGYRSPADDALERMASILGDEFGVKAKVRW 351 Query: 346 T--RGDDIDAACGQLA 359 + RG ++D ACGQLA Sbjct: 352 STRRGREVDGACGQLA 367 >UniRef50_B8ZNC2 Radical SAM superfamily protein n=7 Tax=Streptococcus RepID=B8ZNC2_STRPJ Length = 300 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 116/357 (32%), Positives = 172/357 (48%), Gaps = 69/357 (19%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L Q M+E+ + GEK FRADQ+ +W+Y +F+EMT+++K L KL + Sbjct: 2 KPSIHSLVHQTMQEWVLEQGEKKFRADQIWEWLYRKRVQSFEEMTNLSKDLIAKLNDQFV 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + Q S+DGT+K+ + D +ETV + + ++CV++QVGC + C FC++ Sbjct: 62 VNPLKQRIVQESADGTVKYLFELPDGMLIETVLMRQHYGLSVCVTTQVGCNIGCTFCASG 121 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 R+L EI+ Q IM Sbjct: 122 LIKKQRDLNNGEIVAQ------------------------------------------IM 139 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 L F + + V LA+SLHAPN+E+R + IN+ + IE Sbjct: 140 LVQKYFA--------------------DEGVQVNLAVSLHAPNNELRSSTMKINRAFPIE 179 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP--CKINLIPWNP 313 AA+ Y+E +N RVT EY+ML+ VNDG E A +LAELLK+ +NLIP+NP Sbjct: 180 KLFAAIEYYIETTNR---RVTFEYIMLNEVNDGVEQALELAELLKNIKKLSYVNLIPYNP 236 Query: 314 F-PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 Y RS R+ F L G +VR+ G DIDAACGQL + + R ++ Sbjct: 237 VSEHDQYSRSPKERVLAFYDTLKKKGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQK 293 >UniRef50_B4U5N7 Radical SAM enzyme, Cfr family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5N7_HYDS0 Length = 340 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 118/351 (33%), Positives = 181/351 (51%), Gaps = 30/351 (8%) Query: 18 INLLD--LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 INLL+ N +Q L + +R Q+ W + + + MTDI K LR +LK Sbjct: 2 INLLEDYFNLEQ------KLNLEKYRISQIKSWAFKKKITDIELMTDIPKSLRQELKIDF 55 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 + + + E + + K+ D VE+V I E D TLC+S+Q+GCA+ CKFC + Sbjct: 56 HVLSLDSFLE---GEDSTKFVFKTKDGYFVESVLIKEKDHYTLCISTQIGCAVGCKFCVS 112 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNL SEI+ Q + + + I N+V MGMGEPL N N+ A I Sbjct: 113 TIGGLLRNLSFSEIVDQYFYIS-------ILRNTFIRNIVFMGMGEPLANFENLKKASFI 165 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD---MIDVALAISLHAPNDEIRDEIVPINKK 251 L + F LSKR +T+STS + KL + + + LAISL+A +DE R ++P N Sbjct: 166 FLKE--FELSKRHITISTSAYTNYIKKLKEDSFLNKLNLAISLNASDDETRKALMP-NVI 222 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT--PCKINLI 309 +++ ++ Y + + R+TIEYV++ +N + A L LLK+ K+NLI Sbjct: 223 GSLKELFEILKTYPLE---PRRRITIEYVLIKDINSSLKDAKNLVNLLKNLKHKTKVNLI 279 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 P+N P + R S I RF + L+ + +R ++G ++ AACG L+ Sbjct: 280 PYNENPMLSFERPVESDIYRFQQELLKNDISCTIRWSKGLELAAACGHLSR 330 >UniRef50_A9FD89 Probable RNA methyltransferase sce1580 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=Y1580_SORC5 Length = 398 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 110/293 (37%), Positives = 152/293 (51%), Gaps = 8/293 (2%) Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 + E+ E + D T++ + GD +E+V IP R TLCVSSQVGCA C FC T + Sbjct: 112 PSLEIAERAPAQDDTLRLVLRAGDGALIESVLIPGPARTTLCVSSQVGCARACSFCETGR 171 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G R L EI+ QV A + G P+ N+V MGMGEP NL V+ A+ ++ Sbjct: 172 LGLERQLAAGEIVDQVRIARALAAER---GGAPLRNLVFMGMGEPFDNLGEVLKAIRLLT 228 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 D F + VT+ST GV ++ LA+SL+AP+D R I+P+N ++++ Sbjct: 229 DPRAFRFAPSHVTVSTVGVADKIEPFFRDARAELAVSLNAPDDARRQAIMPVNARFSMAA 288 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 A+ R L RV EYV+ D ND E A LA + C++N+IP NP P Sbjct: 289 LKEAIARALP----PGRRVLFEYVLFDRFNDAPEDADLLAAYVAGLRCRVNVIPCNPGPD 344 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 S +R+D F L +G TT+VR+ RG D+ ACGQLAG R Sbjct: 345 PALRPPSAARLDAFVARLSGHGVTTLVRRPRGRDVGGACGQLAGMARLRQPEP 397 >UniRef50_B7S3M1 Predicted protein n=2 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7S3M1_PHATR Length = 471 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 177/339 (52%), Gaps = 29/339 (8%) Query: 61 TDINKVLRGKLKEVAEIRAPEVVEE-----QRSSDG-TIKWAIAVGDQ-RVETVYIPE-- 111 + + + L+E A+ V Q S+D T K A+ + D VE+V + Sbjct: 60 SQLPRKFLDFLQEDAQSSGFVTVTSRIEFAQTSADRSTTKLAVQLHDGQLVESVLMRYVS 119 Query: 112 -----DDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG 166 + RA+LCVSSQ GCA+ C FC+T G + NL EI+ Q+ + Sbjct: 120 TATSNNSRASLCVSSQCGCAMGCTFCATGTMGLSGNLTAGEILEQIPLPKLDL------- 172 Query: 167 QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDM 225 + NVV MGMGEPL N +NVV A ++D + L+ RVT+ST G+V + KL ++ Sbjct: 173 ---VRNVVFMGMGEPLDNYSNVVEACRALIDRQRWNLAHGRVTVSTVGLVSQIRKLTAEL 229 Query: 226 IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHV 285 +V+LA+SLHAPN + R IVP K Y +E + A+ +++ + IEYVML+ Sbjct: 230 PEVSLALSLHAPNQQDRQAIVPTAKHYPLEDLIDALDQHMMAYLQKRTNPMIEYVMLEGP 289 Query: 286 NDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVR 344 E AHQL +L ++ +NLIP+N S ++ F ++++SYG +R Sbjct: 290 TSTLECAHQLGKLCENRHLVVNLIPYNQTNVRDVLRCPSREHMEEFREIVVSYGSFCTIR 349 Query: 345 KTRGDDIDAACGQLAGDVIDRTKRTLRKR-MQGEAIDIK 382 KT G DID+ACGQL + K++ + +G+ DI+ Sbjct: 350 KTMGADIDSACGQLIT--LRENKQSQNEHNAKGDVKDIE 386 >UniRef50_B6AEB0 Radical SAM domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AEB0_9CRYT Length = 529 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 119/439 (27%), Positives = 186/439 (42%), Gaps = 109/439 (24%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 + + F++L A +V +++ F ++ DI K + +++ ++ + Sbjct: 15 FDSSSFLKVFRELKVSESHAYRVWRYLIQKNVKEFSDIPDIPKRILEEIQLNFKLLTSNI 74 Query: 83 VEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDD-------------------------RA 115 V+ + DG T K I + D +ETV + D R Sbjct: 75 VQSHTTDDGNTTKLIIRLQDGHEIETVIMRYDRCNDVAKKSENKNLDTLEVPNLPIYRRV 134 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 +LCVSSQ+GC + C FC+T G +L EII QV+ A I+ P+ NVV Sbjct: 135 SLCVSSQIGCRIGCTFCATGTLGLGGSLVTGEIIEQVYHAINILN-------EPVKNVVF 187 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISL 234 MGMGEPL N N VV A++I+LD +GLS ++++ST G+ + + D+ V L +SL Sbjct: 188 MGMGEPLENYNEVVDAIKILLDTRLYGLSPSKISISTVGIPSGIVNMADDLPGVGLCLSL 247 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ---------------------- 272 HAP+ +R++IVPI K Y I + + ++ KS N+ Sbjct: 248 HAPDQVLREQIVPIAKMYKISELIRSTDIFIAKSILNKFIKKITDQRNNRTEIKIDNLES 307 Query: 273 -----------GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC----------------- 304 V IEY+++ VND HA LA LL +T Sbjct: 308 TIISPKWFNSHSTVMIEYILIKDVNDSINHAKALANLLNNTYTDKNDINMIFERCIQSER 367 Query: 305 -----------------------KINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFT 340 +N++P++ P Y S ++ F ++L +YG Sbjct: 368 LEKKVAKSFQKAFLDNYKRSNFIFVNILPYSETNATPKYATPSEGKVRTFCRILNNYGIV 427 Query: 341 TIVRKTRGDDIDAACGQLA 359 VR+ G DI ACGQLA Sbjct: 428 VTVRRKMGQDIGGACGQLA 446 >UniRef50_Q1CYE1 Probable RNA methyltransferase MXAN_6459 n=2 Tax=Cystobacterineae RepID=Y6459_MYXXD Length = 358 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 107/350 (30%), Positives = 168/350 (48%), Gaps = 17/350 (4%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTD---INKVLRGKLKEV 74 +NL L+ Q++ L P +V ++ + + +++ + + + L+ Sbjct: 1 MNLKSLSLQELEAALAPLSPSPAAVRKVFAAVFAHGAQSVEDVASARQVPRRVGDHLRAH 60 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIP-EDDRATLCVSSQVGCALECKFC 132 AE+ +VE +R+ DG +K+ R+E V IP D++ +CVSSQVGCAL C FC Sbjct: 61 AEMPKLAIVERRRADDGFVKYLFDSPLGGRIEAVRIPIFDEKYVICVSSQVGCALACDFC 120 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 T + GF RNL+ EI+ QV + + RP+ VV MGMGEPLLN + A Sbjct: 121 MTGKLGFKRNLQTWEILDQVLQVRE-------EADRPVRGVVFMGMGEPLLNYKETLRAA 173 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDK-LGDMIDVALAISLHAPNDEIRDEIVPINKK 251 +I+ GF ++ +T ST+G VPA+ + + + LA S+ + E R +++PI K Sbjct: 174 DILRHPAGFSIAGEAITFSTAGHVPAIRRYVREGHPYRLAFSVTSAIAEKRAKVLPIEKT 233 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + + +AA+R Y E + R I YV + N G E A L + K++LI Sbjct: 234 HPLPELIAAIREYSE---VRRERAMIAYVAISGFNMGREDAEALKVAFEGIRIKVDLIDV 290 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P Y + + F L R + G +I AACG LA Sbjct: 291 TD-PTGKYLPPTPEELSAFRDHLQILKSPVARRYSGGKEIGAACGTLAAT 339 >UniRef50_Q8IM25 Radical SAM protein, putative n=5 Tax=Aconoidasida RepID=Q8IM25_PLAF7 Length = 362 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 103/356 (28%), Positives = 172/356 (48%), Gaps = 26/356 (7%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE--IRAPEVVE 84 + + + + +R Q+M +Y ++M +I +R +LK + I + + ++ Sbjct: 9 SLIKMMERKKFEKYRLKQIMDNIYKGKIIEINKMKNIPTEIRRELKNIFHNNILSIKPIK 68 Query: 85 EQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNL 143 E + D K D ++E + +LC+SSQ+GC+ CKFC+T Q G R L Sbjct: 69 ELKY-DRAYKVLFQCKDNEKIEATSLDFGSHKSLCISSQIGCSFGCKFCATGQIGIKRQL 127 Query: 144 RVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 + EI Q+ + I N+ MGMGEPL N V +++ D+ F + Sbjct: 128 DIDEITDQLLYFQ--------SKGVDIKNISFMGMGEPLAN-PYVFDSIQFFNDNNLFSI 178 Query: 204 SKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 S RR+ +ST G++P + KL + V LA SLH+P E RD++VPINK + + Sbjct: 179 SNRRINISTVGLLPGIKKLNNIFPQVNLAFSLHSPFTEERDQLVPINKLFPFNEVFDLLD 238 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP------CKINLIPWNPFPG 316 + K+ RV I Y+++ ++ND +HA L++ + P + LIP+N Sbjct: 239 ERIAKTGR---RVWISYILIKNLNDSKDHAEALSDHICKRPNNIRYLYNVCLIPYNKAKN 295 Query: 317 A--PYGRSSN-SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 + R + +I +F K+L G + R + G IDAACGQL D + ++ Sbjct: 296 VDENFHRLDDAEKILQFEKILKKNGISFFYRNSFGYSIDAACGQLYADYEPKKRKE 351 >UniRef50_B5JDK5 Radical SAM enzyme, Cfr family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDK5_9BACT Length = 342 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 113/353 (32%), Positives = 178/353 (50%), Gaps = 21/353 (5%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDI--NKVLRGKLKEV 74 K ++ D+ +++ + + G + ++ Y F + ++ + KE Sbjct: 2 KTSIYDI--KKLEKHLRHNGF----GARELRRTYRMLFREFTPLENLGWDDAFTANFKEQ 55 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIP-EDDRATLCVSSQVGCALECKF 131 E +V S DG K D + +ETV + R ++CVSSQVGC +C+F Sbjct: 56 FETSYLTLVSRIDSKIDGATKLLFETPDGKKIETVILRIATGRTSICVSSQVGCTEKCRF 115 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+T + GF RNL+ EI+ QV +A +I+ + R + N+V MGMGEPL N +N+V A Sbjct: 116 CATGELGFFRNLKSEEILDQVVQAGRILASE----DRSLRNIVFMGMGEPLRNYDNLVAA 171 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINK 250 M+ +L + F +R+T+S+ G+ + K V+LA+SL+ ND R E++PIN Sbjct: 172 MDQLLSEHVFKFVPKRITVSSLGIPELIVKFAQRFPQVSLALSLNGSNDAARSEVMPINN 231 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 +Y + + + + +G V IEY+M +ND E A ++A L+ INLIP Sbjct: 232 RYPMADLRSMLEQL---ETIREGIVMIEYIMFKDLNDSVEDAAKVAAFLRGLAVHINLIP 288 Query: 311 WNP--FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 +NP + SS I+ F L S G+ R + G DI AACGQLA Sbjct: 289 YNPDYSLNKSFLPSSIETIEAFKNHLQSEGYKVTRRFSLGQDIAAACGQLANK 341 >UniRef50_D2VS80 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VS80_NAEGR Length = 482 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 132/432 (30%), Positives = 201/432 (46%), Gaps = 82/432 (18%) Query: 12 TTKDGKINLLDLNRQQMREFFKD---LGEKPFRADQVMKWMYHYCC---DNFDEMTDINK 65 +T+ + +L+ LN+ +M+E + FR +++ K++Y + D+ +T ++ Sbjct: 26 STQIVRKSLMGLNKTEMKEILEKTHPHVASSFRLNEIYKFIYKFGARKFDDITVLTKSDR 85 Query: 66 VLRGKLKEVAEIRAPEVVEEQRSSDGTI---------KWAIAVGDQ-------------- 102 +L + + E + + T K+ V D Sbjct: 86 QSLSELYSIDILGNIEEEIKSKKDKHTRKFLFAFQNPKYVPPVADNSVDSTIVSTTSSAS 145 Query: 103 -------------------------------RVETVYI-------PEDDRATLCVSSQVG 124 +VE VYI R T+C+SSQVG Sbjct: 146 SSCGNQQNISDADVAISPMKKPTLKEQKQFNKVEAVYIYHPPKASDSFGRGTVCLSSQVG 205 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVW-----------RAAKIVGAAKVTGQRPITNV 173 C+L CKFC T RNL SEI+ Q+ + + + N+ Sbjct: 206 CSLNCKFCRTGTAPIERNLLASEIVSQLVSVKHRLMDFPIYMTEEERKRASIEKSFVNNI 265 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAIS 233 V MG GEPL N NV A+EI+ D G G+SKR++ +STSGV + + + + V LAIS Sbjct: 266 VFMGEGEPLYNYKNVKKAIEILSD--GCGISKRKIIVSTSGVCNLIPDVVNDLGVNLAIS 323 Query: 234 LHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 LHA +E+RD IVPINK + +E +R K+N +T EYVML+HVND + A Sbjct: 324 LHATTNELRDNIVPINKIFPLEVLFETLREQCFKNNN--RHITFEYVMLNHVNDFIDDAK 381 Query: 294 QLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDA 353 +L +L+KD PC +NLI +N + G+ + SS+ RI+ FSK L G + VR ++G DI Sbjct: 382 RLVKLVKDIPCSVNLIAFNEWEGSGFECSSDERIEEFSKYLYKNGISAPVRHSKGQDILG 441 Query: 354 ACGQLAGDVIDR 365 ACGQL ++ Sbjct: 442 ACGQLKNRNENK 453 >UniRef50_C1ZMH3 23S rRNA m(2)A-2503 methyltransferase n=3 Tax=Planctomycetaceae RepID=C1ZMH3_PLALI Length = 273 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 145/264 (54%), Gaps = 10/264 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 + + + ++ ++ ++ G +RA Q+ + ++ F EMT++ LR L + Sbjct: 5 IYEKSPAELVQWCQEQGLPTYRAGQIQQQIFPNRATQFGEMTNLPAKLRELLAATFTLLP 64 Query: 80 PEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG 138 EVV Q + D T K + + D VE V + EDDR T+C+S+QVGC + C FC++ G Sbjct: 65 SEVVAHQIAKDRTEKLLLQLHDGSLVECVLMREDDRRTICISTQVGCGMGCVFCASGLLG 124 Query: 139 FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 RNL EI+ QV R +++ +TNVV+MGMGEPL NL N++PA++ + D Sbjct: 125 LKRNLTTGEILEQVLRLDRLL-----PADEKLTNVVVMGMGEPLANLKNLLPALDRLTAD 179 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 G GL RR+T+ST G+ + +L LA+SLHAP E+R ++VP+NK IE Sbjct: 180 DGLGLGARRITVSTVGLPEKIRELAQTGHQFNLAVSLHAPEAELRTKLVPVNKNIGIEAV 239 Query: 258 LAAVRRYLEKSNANQGRVTIEYVM 281 L A Y + RV+ EYV Sbjct: 240 LEAADDYFAITGR---RVSYEYVF 260 >UniRef50_C7GI13 Radical SAM enzyme, Cfr family n=15 Tax=Clostridiales RepID=C7GI13_9FIRM Length = 329 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 155/351 (44%), Gaps = 41/351 (11%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 ++M E GE RA + +Y +++ Sbjct: 17 YGFTYKEMSEVI---GEDKARA--LYAELYKQ----PFHKKNLS---------------I 52 Query: 81 EVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 + +SSD T K+ + D R +ETV+I D T+CVS+QVGC++ C FC + + GF Sbjct: 53 STKKVYKSSD-TEKYVYELKDNRYIETVFIKRRDGGTVCVSTQVGCSVGCIFCESGRNGF 111 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL SEI+ QV + + +V MGMGEPL N +N++ A+ I+ D Sbjct: 112 VRNLTPSEIVQQVILIRQ-----------KVNRIVFMGMGEPLFNYDNLIAAIHILRDRN 160 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G +T+ST G V L KL + + + L ISLHA R+ I+P Y IE + Sbjct: 161 GLNFPTDGITVSTVGPVNQLKKLREEHLKIQLTISLHAATQAARNCIIPHMHMYAIEDVV 220 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 Y S + +V Y++L +ND + QLA+ K IN++ +NP + Sbjct: 221 KQALSY---SQRHNRKVVFAYLLLPGINDRSSDIRQLAKWFKGKNVMINVLQYNPTSNSK 277 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 + F L G +R + G +I AACGQLA K+ Sbjct: 278 IRAPQKQEMVAFKHQLEQTGLEVTMRVSHGREIKAACGQLANTYNKAKKQQ 328 >UniRef50_Q7UPG1 Probable RNA methyltransferase RB6963 n=2 Tax=Planctomycetaceae RepID=Y6963_RHOBA Length = 379 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 112/361 (31%), Positives = 180/361 (49%), Gaps = 19/361 (5%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +M +D P QV + + + F+ +D + + + E E+ + ++ Sbjct: 11 FQTHEMEALRRDRRLDP----QVFRKLRNDLLKKFE--SDEAVLEKYPVAEAIELHSLKL 64 Query: 83 VEEQRSS-DGTIKWAIAVGDQ-RVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGF 139 + S DG K +E+V + R TLCVSSQ+GCA C FC+T + G Sbjct: 65 YQRMDSEIDGATKLLFETESGMLIESVILRIATGRTTLCVSSQIGCAAACDFCATGKMGI 124 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 +NL EI+ QV +A +I+ R ++N+V MGMGEPL N NV A+E++ Sbjct: 125 AKNLATEEILDQVVQAGQILRGE----DRRLSNIVFMGMGEPLHNEVNVTEAIELLTAPD 180 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F S V +ST GV + +L ++ LA+SLH+ + R++I+P+ KK ++ Sbjct: 181 HFARSPSTVLVSTVGVPAGMLRLAKRFPNLNLALSLHSADQTTREKIIPLGKKASLAQLH 240 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 A+ E IEY+ML VND + A +L + + D +NLIP+N +P Sbjct: 241 DAIH---EIQTIQDREFMIEYLMLRDVNDSAKDADRLIDWIGDLRVHVNLIPYNTIEASP 297 Query: 319 Y-GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGE 377 + SS I+ F+ +L + G T VR + G+DI+AACGQL +R + +R + E Sbjct: 298 HLHASSRPVIESFADILKASGLKTTVRYSLGNDIEAACGQLIRQ-ENRQRAMQARRTESE 356 Query: 378 A 378 + Sbjct: 357 S 357 >UniRef50_Q136A2 Probable RNA methyltransferase RPD_2859 n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Y2859_RHOPS Length = 359 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 16/304 (5%) Query: 57 FDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRA 115 F D + L+ + + + K + D VE+V I D Sbjct: 50 FFPHADPPRRLQNWARSRGVRLRTLTRIGRDQGGRSEKMLFGLHDGYAVESVLIRRFDGH 109 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 T C+SSQVGCA C+FC++ Q G RNL EI+ QV R + +V Sbjct: 110 TACISSQVGCAFACRFCASGQAGLMRNLEAGEIVEQVVRL-----------GPKVNRIVF 158 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISL 234 MG+GEPL N V+ A+ I+ D G +TLST G+ AL +L + + + L ISL Sbjct: 159 MGIGEPLNNYQQVLKAIRILRDRQGMNFPTTGITLSTIGIPKALKQLREEHLAINLTISL 218 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 HA E+RD ++P +K+ + + + + + VT Y++L +ND A + Sbjct: 219 HATTQEVRDRLIPGARKHPLGEVVERACAW---ARRHNRPVTFAYLVLPGINDSIADARR 275 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 LA +L+D+P ++NL+ WNP G R+ + + F L + +VR T+G DI AA Sbjct: 276 LAAMLRDSPARVNLMRWNPVDGVGLQRTPDRSLAHFRTTLENALVPVVVRDTQGRDISAA 335 Query: 355 CGQL 358 CGQL Sbjct: 336 CGQL 339 >UniRef50_Q5CQD5 Conserved protein with transmembrane region at C-terminus (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CQD5_CRYPV Length = 602 Score = 316 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 123/480 (25%), Positives = 188/480 (39%), Gaps = 133/480 (27%) Query: 5 LVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDIN 64 L+ EN D K + + + + + + D G K A + + + N E+ DI Sbjct: 1 LIIMENKRRTDIKKHSI-FDYKSLTKALDDAGVKRIHAYTIWRNIVQKGIKNMSEIKDIP 59 Query: 65 KVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDD--------- 113 K + E I +++ Q S DG T K + D +E V + D Sbjct: 60 KAAYKIINEQFSILNIQLINSQTSKDGNTTKIIFRLQDSHEIEAVIMRYGDDQVNENTNI 119 Query: 114 ------------------------RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEII 149 R ++CVSSQ+GC + C FC+T G +L EI+ Sbjct: 120 CNSNSNNKNNDSNQQEISTSSKYKRISICVSSQIGCRMGCMFCATGSMGLRGSLLSGEIL 179 Query: 150 GQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVT 209 Q++ I+ + P+ NVV MGMGEPL N + V+ ++ +M+D F LS + Sbjct: 180 QQLYYIKNIL-------KEPVRNVVFMGMGEPLENYDEVIDSIRLMVDPRIFSLSSGHIL 232 Query: 210 LSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS 268 +ST G+ + L D+ V L +SLHAPN +R+ I+PI + Y I + ++ ++ K+ Sbjct: 233 VSTVGIPSNIINLADDLPGVGLCLSLHAPNQSLRERIIPIARLYKISDLMRSLDIFIFKT 292 Query: 269 NANQ---------------------------------GRVTIEYVMLDHVNDGTEHAHQL 295 N+ + IEY ML VND +HA +L Sbjct: 293 IINKCYKNLLDDRNKDHIKDNMNYDDILISNKLLYGHKMIIIEYTMLKDVNDSEDHAVEL 352 Query: 296 AELLKDTP----------------CKIN-------------------------------- 307 A LLK+TP K+N Sbjct: 353 ANLLKNTPISKNIIEEIIDNRDDSVKMNINYMSDNKIINKNFKSHIASTIFKELSKDFNR 412 Query: 308 -------LIPWNPFPGA-PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 LIP+N + + S I +F+KVL+ VR+ GD I ACGQLA Sbjct: 413 TNFAIVNLIPYNKTNTSTRFSTPSKEIITKFAKVLIDLNIFVTVRRKMGDGIFGACGQLA 472 >UniRef50_B7FTW5 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTW5_PHATR Length = 296 Score = 316 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 115/295 (38%), Positives = 151/295 (51%), Gaps = 21/295 (7%) Query: 83 VEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDR--ATLCVSSQVGCALECKFCSTAQQGF 139 V E ++DGT K + + D VETV IP D+R +TLCVSSQVGC C FC T + G Sbjct: 1 VHESVAADGTTKLLLQLVDGLQVETVIIPWDERQRSTLCVSSQVGCRQACTFCLTGRMGI 60 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 R+L EI+ QV A + + PI N+V MGMGEP N + VV A ++ Sbjct: 61 LRSLSADEILVQVLLAKRACRENNIY---PIDNIVFMGMGEPADNTDAVVRAANVLTHQQ 117 Query: 200 GFGLSKRRVTLSTSGVVP-ALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F L+ RR+T+ST P A KLG VALA S+HA + +R E+VP KY +E Sbjct: 118 QFQLTPRRITISTVAPSPDAFLKLGKA-PVALAWSVHASREAVRRELVPTT-KYTMEELR 175 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-------DTPCKINLIPW 311 + L + + +E +LD +ND E A LA+ + +NLIPW Sbjct: 176 EGYIKALLDRSRSMRTTMLEVTLLDKINDSLEDAEHLADFCQPLLKSVPGIKLVVNLIPW 235 Query: 312 NPF-----PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 N P + Y + + RI F K L+ G VR TRGDD AACGQLA Sbjct: 236 NDISASFGPASVYRKPTTERIGEFQKALIGRGILCYVRTTRGDDEGAACGQLATT 290 >UniRef50_Q2Z000 Putative uncharacterized protein n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z000_9BACT Length = 365 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 102/351 (29%), Positives = 165/351 (47%), Gaps = 21/351 (5%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 DL ++ G A ++ + + +++ + +++E + Sbjct: 25 FKDLTAAELHAALAPEGVSLRLARRLQAAVLKRDAF-PRTLPEVSDKMLARIREEVRLPK 83 Query: 80 PEVVEEQRSS-DGTIKWAIAVGD-QRVETVYIP-----EDDRATLCVSSQVGCALECKFC 132 + ++ S+ DG K+ + E V IP D++ C+SSQVGCAL C FC Sbjct: 84 LVLKDKAVSARDGFAKYLFQGDGPEPFEAVRIPLLHRSGDEKYIACLSSQVGCALGCAFC 143 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T + GF RNL E++ QV R + + PI V MGMGEP+LN VV A Sbjct: 144 ATGRMGFVRNLSAWEMVDQVIRLS-------ADSEHPIRGAVFMGMGEPMLNYEAVVRAA 196 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKK 251 I+ + G +S + V++ST+GVVP + + D + L +SL + + R E++P+ + Sbjct: 197 RILCEPCGLAVSAKAVSISTAGVVPGIRRFTADRLPFRLVVSLTSADSARRREVMPLEQA 256 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + + AVR Y + S RV + + M+ N E A QLA L++ P +++LI Sbjct: 257 YPLTDLMEAVREYHKSSG---QRVILAWTMISGFNTREEDAVQLAALVRGLPIRLDLIDV 313 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSY-GFTTIVRKTRGDDIDAACGQLAGD 361 N G + S+ + F L + R + G DI AACG LAG Sbjct: 314 NDATG-RFKPPSSLELHEFRDALSKHLKMPVARRYSGGKDIRAACGMLAGR 363 >UniRef50_B5Y3J7 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y3J7_PHATR Length = 290 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 142/288 (49%), Gaps = 15/288 (5%) Query: 84 EEQRSSDGTIKWAIAVGDQR-VETVYIPE-DDRATLCVSSQVGCALECKFCSTAQQGFNR 141 +S D T K + + D VETV IP R+TLCVSSQVGC C FC+T + G R Sbjct: 1 HISQSRDSTTKLLLRLSDGLEVETVIIPWTGGRSTLCVSSQVGCRQGCTFCATGRMGKLR 60 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 +L EI+ Q++ A KI + P+TNVV MGMGEP N + V+ A +IM F Sbjct: 61 SLNADEILAQLFFARKICRQKNLP---PVTNVVFMGMGEPADNKDAVIRATDIMTTRELF 117 Query: 202 GLSKRRVTLSTSGVVPA-LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 LS +VT+ST P + LA S+HA NDE+R ++VP K+ + Sbjct: 118 QLSASKVTVSTVAPTPDSFLQFA-HAHCVLAWSVHAANDELRRQLVPTT-KHAMTELRQG 175 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-------DTPCKINLIPWNP 313 + L N +E ++ +ND + A +L + + +NLIP+N Sbjct: 176 LIDTLLIRPHNFRTTMLEVALISGINDSEKEADELVDFAQVIIDEVPGCKLVVNLIPFND 235 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 Y + S + F K L +G +R TRGDD AACGQLA + Sbjct: 236 IGQNRYTKPSMEAVSVFQKRLREFGLVAHIRTTRGDDESAACGQLATN 283 >UniRef50_A4S5T8 Predicted protein n=7 Tax=Viridiplantae RepID=A4S5T8_OSTLU Length = 254 Score = 311 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 99/234 (42%), Positives = 153/234 (65%), Gaps = 8/234 (3%) Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC TA+ G +NL ++I+ QV +A ++VGA++ ++NVV MGMGEPL N++ Sbjct: 1 MNCQFCYTAKMGLRKNLSAAQIVEQVVQARRMVGASE------VSNVVFMGMGEPLHNVD 54 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIV 246 V+ A+ I+LD G G S+ +VT+STSG+VP +++ + +LA+SL+A D IR+ I+ Sbjct: 55 EVLKAVSILLDPKGLGFSRNKVTVSTSGLVPQMERFLRESEASLAVSLNATTDYIRNWIM 114 Query: 247 PINKKYNIETFLAAVRRYLEKS--NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 PIN+KYN+E L +RR + +Q +V EY+ML+ VND E A +L E+ +D PC Sbjct: 115 PINRKYNLEMLLGLLRREFPRQSLGRHQRQVFFEYIMLEGVNDSDEDADRLVEIARDIPC 174 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 KINLI +N G+ + S RI+ F + + G T +R++RGD+ +ACGQL Sbjct: 175 KINLIYFNTHDGSEFKCSDQERINAFRQRVSDAGVTCTIRQSRGDEEMSACGQL 228 >UniRef50_Q2IHD1 Probable RNA methyltransferase Adeh_4229 n=4 Tax=Anaeromyxobacter RepID=Y4229_ANADE Length = 338 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 103/325 (31%), Positives = 159/325 (48%), Gaps = 18/325 (5%) Query: 42 ADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD 101 A ++ + + ++ + + ++ +A ++E + DG K+ + D Sbjct: 23 ARRITGAVIGRGAP-LRDARNVRRSVLDEVDALATPGELRLLESVDAKDGFRKYLFELPD 81 Query: 102 Q-RVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIV 159 RVETV IP D +C+SSQ GCAL C FC+TA+ G +R+LR E++ Q+ Sbjct: 82 GLRVETVRIPLYDTHHVVCLSSQAGCALGCAFCATAKLGLDRSLRSWEMVSQLLAVR--- 138 Query: 160 GAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL 219 +RPIT VV MG GEP LN + V+ A + D G + RR+++ST+GVVP + Sbjct: 139 ----ADSERPITGVVFMGQGEPFLNYDEVLAAAYALCDPAGARIDARRISISTAGVVPMI 194 Query: 220 DKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIE 278 + + L ISL+A R ++P+ + + ++ + A+R + A +GRVT+E Sbjct: 195 RRYTAEGHKFRLCISLNAAMPWKRRALMPVEQGFPLDELVEAIREHA----ALRGRVTLE 250 Query: 279 YVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSY- 337 YVM+ VN G E A L LL P ++N I N G Y + F L Sbjct: 251 YVMISGVNVGEEDAAALGRLLAGIPVRLNPIAVNDASG-RYRPPDEDEWNAFRDALAREL 309 Query: 338 -GFTTIVRKTRGDDIDAACGQLAGD 361 G + R + G D AACG LA Sbjct: 310 PGTPVVRRYSGGQDEHAACGMLASR 334 >UniRef50_Q01C13 Homology to unknown gene n=1 Tax=Ostreococcus tauri RepID=Q01C13_OSTTA Length = 368 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 33/308 (10%) Query: 63 INKVLRGKLKEV---AEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPE-DDRAT 116 + +++ +L++ E+ V E SSDG T K + + D ++E + R T Sbjct: 6 LPRIVVERLRDGTSGFELYTTRVAHESASSDGSTTKLIVELQDGHKIEACVMRHAKGRTT 65 Query: 117 LCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMM 176 LCVSSQVGC + C FC+T G NL EI+ Q+ A ++ Sbjct: 66 LCVSSQVGCKMGCTFCATGTLGELGNLASFEILEQLAHANRVAA---------------- 109 Query: 177 GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLH 235 PL N ++V+ A+ +M DD F LS ++T+ST GV+P + L D LA+SLH Sbjct: 110 ----PLNNYDSVIEAIGVMTDDKAFALSASKITVSTVGVIPRMRTLTRDAPGTCLALSLH 165 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQL 295 AP E+R +IVP Y ++ + + YL ++ + + IEY +L VND A +L Sbjct: 166 APTQELRQKIVPTATAYKLDDLMRVLEEYL--ASGPKMKTMIEYCVLGGVNDDETCAEKL 223 Query: 296 AELLKDTPCKI--NLIPWNPFPG-APYGRSSNSRIDRFSKVL-MSYGFTTIVRKTRGDDI 351 EL + KI NLIP NP A + + + + ++L YG R T GDDI Sbjct: 224 GELFRGKEEKIILNLIPLNPTDTPAGHVPPTPEAVRKMMEILMKKYGLFVTRRHTMGDDI 283 Query: 352 DAACGQLA 359 ACGQLA Sbjct: 284 AGACGQLA 291 >UniRef50_B6KPF5 Radical SAM domain-containing protein n=4 Tax=Toxoplasma gondii RepID=B6KPF5_TOXGO Length = 619 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 143/288 (49%), Gaps = 21/288 (7%) Query: 105 ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV 164 E + RAT+C+S+QVGC + C FC+T G RNL EI+ Q++ A+++ Sbjct: 205 EQRLYKSNRRATVCLSAQVGCQMGCTFCATGTMGKKRNLAEWEILEQLYHASRV------ 258 Query: 165 TGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG- 223 I N+V MGMGEPL N N+VV ++ M F + RV +ST G+ + +L Sbjct: 259 ---ETIRNIVFMGMGEPLDNYNSVVSSIRFMTQPNKFAIGGHRVCISTVGLPHKIRQLAS 315 Query: 224 DMIDVALAISLHAPNDEIRDEIVPINKK-YNIETFLAAVRRYLEKSNANQGRVT------ 276 D+ LA+SLHAP+ R +++P + +E L A ++++ Sbjct: 316 DLPACRLALSLHAPDQPTRLKLMPRAAAGWKLERVLEATDEFVKQQKRLNSTGMKNIGLL 375 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDT--PCKINLIPWNPFP-GAPYGRSSNSRIDRFSKV 333 +EY+M+ VND E AH L +L+ +NLIP+NP Y S+ R+D F + Sbjct: 376 VEYIMIQDVNDTLEQAHALGRILQPRADAVIVNLIPYNPTDVPYDYKPSTQERVDDFLTI 435 Query: 334 LM-SYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAID 380 L Y +VR+T G DID+ACGQL R E+ D Sbjct: 436 LRKEYAIKVLVRQTLGQDIDSACGQLVVRAGQEESRGKMSDTSDESED 483 Score = 71.4 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 7/104 (6%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 ++ + ++ D + L K A ++ +++ +F E+ D+ + L Sbjct: 34 APRRESRTSVFDAS-----ALLSALDGKTVHAQKIWRYVVQKNVQDFREIPDLPRRLYAT 88 Query: 71 LKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPED 112 L E + A V+ + S D T K + D +ET + Sbjct: 89 LAENFCLHASRVLRTKTSRDRSTTKLLLEFPDGSQIETCIMRYG 132 >UniRef50_A9EPV3 Probable RNA methyltransferase sce3898 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=Y3898_SORC5 Length = 393 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 117/392 (29%), Positives = 180/392 (45%), Gaps = 51/392 (13%) Query: 8 PENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 PE + G I+L D R + LGE P RA ++ + Sbjct: 3 PEELAGACG-IDLTDARR--IVSLAHRLGELPARAPATVR-----------------RAA 42 Query: 68 RGKLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIP--EDDRATLCVSSQV 123 + EIR +VE + S+ D +K+A + D VE+V IP R + CVSSQV Sbjct: 43 LDAARSAGEIRTLALVERRASAEDPFVKYAFRLEDGATVESVRIPLERPGRYSACVSSQV 102 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCAL C FC+T + G RNL EI+ QV + + A V G + V+ GMGEPL Sbjct: 103 GCALACAFCATGRMGLTRNLEAWEIVEQVRLIRRDLDAT-VGGGARVHGVLFQGMGEPLA 161 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIR 242 N + V+ A+ ++ + + R +T+ T+G+ + +L ++ V L +SL + R Sbjct: 162 NADRVIQAIRVLSEPSAQAIDMRNITVCTAGLPSGIRRLAAEVPAVRLGLSLGSVRPGKR 221 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 ++PI+ + +E LAAV + + A+ Y +L ND E A LA L + Sbjct: 222 RLLMPIDGAHPLEEVLAAVGEH---ARASGHAPMWAYTLLADQNDTDEDAACLAALARGF 278 Query: 303 PC------KINLIPWNPF--PGAPYGRSS--------------NSRIDRFSKVLMSYGFT 340 +++LIP+N PG P ++R+D F VL + G Sbjct: 279 AAQHGISPRLSLIPYNAIGAPGDPLPSPDGGDERGASADPFVRSARLDAFRAVLSAAGVG 338 Query: 341 TIVRKTRGDDIDAACGQLAGDVIDRTKRTLRK 372 +IVR + G D+ AACGQLA + + R+ Sbjct: 339 SIVRYSGGGDVGAACGQLARPSAEAQRPGGRR 370 >UniRef50_B8LDJ4 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDJ4_THAPS Length = 319 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 141/307 (45%), Gaps = 39/307 (12%) Query: 83 VEEQRSSDGTIKWAIAVGDQR-VETVYIP-----------------EDDRATLCVSSQVG 124 V SSDGT K + + D VETV IP R T+C+SSQVG Sbjct: 21 VHTSTSSDGTTKLLLRLMDGLEVETVLIPFWADVAQKKRINEKDNSSLGRTTVCISSQVG 80 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C C FC+T + G R+L EI+ Q++ A K+V PITN+V MGMG+ N Sbjct: 81 CRQGCTFCATGRMGKLRSLTTDEILAQLFYAKKVVRVVLP----PITNIVAMGMGDAADN 136 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA-LDKLGDMIDVALAISLHAPNDEIRD 243 ++ V A+ IM F S RVT+ST P D LA S+HA DE+R Sbjct: 137 VDAVKGAINIMTRRELFQFSASRVTVSTVAPSPQAFLDFADS-KCILAWSVHATRDELRK 195 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP 303 ++VP KY + + L++ IE ++D VND A +LAE L Sbjct: 196 QLVPTT-KYPMVELRQGLIDALKQ--RKLRTCMIEVALMDGVNDSMREAEELAEFLTYIT 252 Query: 304 CKI-------NLIPWNPFPG-----APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI 351 ++ NLIP+N Y + S ++ F K L VR TRGD+ Sbjct: 253 NEVPGSKLLCNLIPYNDIGEGAGGVVAYRKPSMEKVMAFQKRLQELSVYAHVRGTRGDEE 312 Query: 352 DAACGQL 358 ++ACGQL Sbjct: 313 NSACGQL 319 >UniRef50_Q3SHI2 Probable RNA methyltransferase Tbd_1951 n=22 Tax=Bacteria RepID=Y1951_THIDA Length = 362 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 24/359 (6%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMK-WMYHYCCDNFDEMTD--INKVLRGKLKEVA-EIR 78 + ++R+ +D G P A +V++ W+ DN + + + LR L + E+R Sbjct: 1 MRLPELRQRLRDHGAAPCHAGRVLRAWVAGRPLDNRRQRAEDFLPLRLRNALPGLFDELR 60 Query: 79 APEVVE-EQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 V E DG+ + + + D VE+V +P D +CVS+QVGCA+ C FC T + Sbjct: 61 NLAQVHSEHPGEDGSARLLVRLADGQTVESVLLPRDG---VCVSTQVGCAVGCVFCMTGR 117 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G R L +EI+ QV A +RP+ VV MGMGEP NL+NV+ A+E++ Sbjct: 118 AGLLRQLSGAEIVAQVVLAR---------SRRPVRKVVFMGMGEPAHNLDNVLDAIELLG 168 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIE 255 + G + + + ST G ++L + A A+SLH + +R ++P + Sbjct: 169 LEGG--IGHKNLVFSTVGDRRVFERLPQSTVKPARALSLHTTDRALRRRLLPRAPDIAPQ 226 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + Y ++ + ++ +L+ +ND +A LL +NLIP+N Sbjct: 227 ELVELGEAYARRTGYP---IQYQWTLLEGINDTEAELEGIARLLAGRYAVMNLIPYNATE 283 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRM 374 + R S +R ++ L G +R + G D+D CGQL +D R+ + Sbjct: 284 ADGFNRPSWARAAEMARRLHRRGVLAKLRHSAGQDVDGGCGQLRARALDAAPVLARRPL 342 >UniRef50_B3LAU1 Radical SAM protein, putative n=4 Tax=Plasmodium RepID=B3LAU1_PLAKH Length = 377 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 23/298 (7%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE--IRAPEV 82 + + +R Q++ MY + +M ++ +R ++K++ + + + Sbjct: 7 YASLLKMMDRNSFPKYRLQQILDNMYKAKITSVSKMKNVPTNIRREMKKIFSENLLSIKP 66 Query: 83 VEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 ++E + D K D +++E + +LC+SSQ+GC+ CKFC+T Q G R Sbjct: 67 LKEYKF-DRAYKVLFECKDKEKIEATSLDFGSHKSLCISSQIGCSFACKFCATGQIGIKR 125 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 L + EI Q+ + + NV MGMGEPL N +V +++ + F Sbjct: 126 QLELDEITDQLLYFQ--------SKNENVRNVSFMGMGEPLAN-PHVFESIKFFNNVNLF 176 Query: 202 GLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 LS RR+ +ST G++P + KL D+ V L+ SLH+P E RD++VPINK + L Sbjct: 177 SLSSRRINISTVGLLPGIKKLNDLHPQVNLSFSLHSPFSEERDKLVPINKLFPFHEVLDL 236 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP------CKINLIPWN 312 + + ++ RV I Y++L VND +HA L + P + LIP+N Sbjct: 237 LDSRIARTGR---RVWISYILLKDVNDSKDHAEALCNHIVQRPRAVRYLYNVCLIPYN 291 >UniRef50_B6KND1 GPI transamidase 8, putative n=3 Tax=Toxoplasma gondii RepID=B6KND1_TOXGO Length = 270 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 124/262 (47%), Gaps = 21/262 (8%) Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL 182 GCA C FCS + GF R L EI QV + I +V MGMGEPL Sbjct: 9 AGCAFNCSFCSVGKSGFLRQLSADEITDQVLFFLRQ--------GIKIDSVSFMGMGEPL 60 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEI 241 N + A+ I+ D F S R++ +ST GV+P + KL + V LA SLH+P E Sbjct: 61 ANPK-MFDAIRILTDPLLFNFSARKLAVSTLGVLPGIKKLTEEHPQVNLAFSLHSPFPEE 119 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 R+ +VP N+ + +E + L K+ R+ I Y+++ N+ EHA LA LL++ Sbjct: 120 RNILVPANRMFPMEEVFDLLDERLAKTGR---RIWISYILIKGRNNTEEHAKALAALLRE 176 Query: 302 TP------CKINLIPWNPFPG--APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDA 353 +N+IP+N G + S + ++ F+ +L + R T G IDA Sbjct: 177 RRRPTRHLYHVNVIPYNTAQGVESSMQPPSAAEVNHFTDLLRKLHLSVSRRHTIGSAIDA 236 Query: 354 ACGQLAGDVIDRTKRTLRKRMQ 375 ACGQ+ + RK Q Sbjct: 237 ACGQMHAEYEVGQLTKQRKAQQ 258 >UniRef50_C6P0S6 Radical SAM domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0S6_9PROT Length = 412 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 101/414 (24%), Positives = 167/414 (40%), Gaps = 90/414 (21%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDN----FDEMTDINKVLRGKLKE-VAEI 77 + +R+ DLG KP D++++ C + E T LR +L AE+ Sbjct: 1 MRISHLRQRLYDLGAKPCHEDRLLRGWSQVCSYDRKGSPAE-TFFPLALRNELPGIEAEL 59 Query: 78 RAPEVVE-------------------EQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATL 117 ++ ++ + I + D + VE+V +P R L Sbjct: 60 DGLARLKSEHPDTLTLPLSQGERELNRHSDNEKVARLLIELHDGQMVESVLLP---RGGL 116 Query: 118 CVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMG 177 CVS+QVGCA+ C FC + + G R L +EI+ QV A K +R ++ VV MG Sbjct: 117 CVSTQVGCAVGCVFCMSGRDGLLRQLGSAEIVAQVVLARK---------RRAVSKVVFMG 167 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI----------- 226 MGEP NL+NV+ A+E++ + + + LST G + ++L + + Sbjct: 168 MGEPAHNLDNVLEAIELLGTQG--NIGHKNLVLSTVGDLRVFERLMEGLTHKPSPQPSGG 225 Query: 227 ------------------------------------DVALAISLHAPNDEIRDEIVPINK 250 ALA+SLH ++ +R ++P Sbjct: 226 TTDHSTRPSENNGQVAGHPACGRGGNRERQSSIAAVKPALALSLHTTDEVLRTRLLPQAP 285 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 + +E + Y + V ++ +++ VND ++ +LLK +N IP Sbjct: 286 RIPVEELVERAEIYARATGYP---VQYQWTLIEGVNDSDAELARIVQLLKGKYAIMNFIP 342 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +N G Y R S RI + L G + VR + G +I+ ACGQL Sbjct: 343 FNEVDGLTYRRPSGERIAAMAYALNGQGIYSRVRDSAGQEIEGACGQLRARAAK 396 >UniRef50_B8BRJ2 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRJ2_THAPS Length = 438 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 101/377 (26%), Positives = 161/377 (42%), Gaps = 51/377 (13%) Query: 11 VTTKDGKINLLDLNRQQMREFF---KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 V + DLN F + LG ++ Q YH ++ + +D N + Sbjct: 82 VAETGALTSAADLNTISNEHGFDKGQGLGMSAWKKLQSSMQQYHATANDPTQQSD-NDSM 140 Query: 68 RGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV--GDQRVETVYIPEDDRA--TLCVSSQV 123 +A + + SSDGT K + + VE+V IP D+ TLCVS Sbjct: 141 YSINDSIASLS-----HMKVSSDGTTKLLLKMVKDGLEVESVIIPWMDKGFSTLCVSWAA 195 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR------PITNVVMMG 177 G V ++ ++ A+KI + P+ N+V MG Sbjct: 196 G------------------KDVHSVLPDMYYASKICRVVESIPGNENKALPPVDNIVFMG 237 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAP 237 MGEP N + VV A+ ++D FG+ + ++T+ST P+ ALA S+HA Sbjct: 238 MGEPADNADAVVRAVNTLVDRRMFGVGQSKITISTVAPDPSAFATLGSAPAALAWSVHAV 297 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 +D +R ++VP KY++E A + + L + R +E ++ VND + A L+E Sbjct: 298 DDSLRRQLVPTT-KYSMEELRAGLVKALSLRSNKLRRTMLEVALMKDVNDSPDDARLLSE 356 Query: 298 L-------LKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYG------FTTIVR 344 ++ + +NLIP+N Y S R+ F K+++ G VR Sbjct: 357 FAMSIMKEVRGSKIVVNLIPFNDIGHPTYRTPSMERVLEFQKIVVESGDNCDTQVLCYVR 416 Query: 345 KTRGDDIDAACGQLAGD 361 TRGD+ +ACGQLA Sbjct: 417 TTRGDEESSACGQLATK 433 >UniRef50_C5KHT4 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KHT4_9ALVE Length = 308 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 17/285 (5%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV-AEIRAPEVV 83 ++ E + ++ V++ ++ + + + + +R L+ E +P V Sbjct: 36 LSEIVECLEKERTPEWQIGLVIQDVFKKGVSSPSAINRVPQGVRDALQARLGESLSPLRV 95 Query: 84 EEQRSSDGTIKWAIAV--GDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 EQ S+D K+ + ++E V + +LCVSSQ+GCA C FC+T + G R Sbjct: 96 LEQGSADFAHKFLLESRQDGGKIEAVGLDFRSHTSLCVSSQIGCAFNCSFCATGKLGLKR 155 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 L V EI+GQV + +V MGMGEPL N + A+ +M D Sbjct: 156 QLSVDEIVGQVLMFR--------ATGNVVDSVSFMGMGEPLANPK-IFNAISVMTDPQLV 206 Query: 202 GLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 GLS RR+++ST G++P L KL ++ +A SLH+P E R++I+PI + Y Sbjct: 207 GLSTRRMSISTIGIIPGLVKLTELHPQANVAYSLHSPFPEEREKIMPIQRVYPFAKVFDV 266 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA-HQLAELLKDTPC 304 + ++++ R+ I Y++L +ND +A ++ LK P Sbjct: 267 LDDRIKRTGR---RIWISYLLLKGINDSERYATYEAKNALKRKPA 308 >UniRef50_UPI0001698B51 radical SAM enzyme, Cfr family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B51 Length = 220 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 105/214 (49%), Positives = 143/214 (66%), Gaps = 7/214 (3%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 NL++L+++ M F +LG K F V KW++ +F++MTDI+K LR +L+ +AEIR Sbjct: 5 NLMELDQRSMERCFVELGSKAFHGRNVFKWIHKQGVIDFNQMTDISKRLRVQLESLAEIR 64 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 PE+V EQ + DGT KW + + D R+ETVYIP+ +R+T+CVSSQVGCAL C FCST Sbjct: 65 LPELVFEQPARDGTRKWVLQLDDGQRIETVYIPDGERSTICVSSQVGCALNCSFCSTGSP 124 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF + G +R +G V P TN+V+MGMGEPL N + VV AM+IM D Sbjct: 125 GFQ----PQSLGGGDYRPG--LGWPAVNWWHPPTNIVLMGMGEPLANFDAVVTAMDIMQD 178 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALA 231 D + LSK RVT+STSG+VPAL +L ++ DV+LA Sbjct: 179 DSAYMLSKYRVTISTSGIVPALRQLREVSDVSLA 212 >UniRef50_A8J882 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J882_CHLRE Length = 239 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 91/239 (38%), Positives = 120/239 (50%), Gaps = 11/239 (4%) Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC T ++G NL ++II + PITN+V MGMGEPL N Sbjct: 1 MNCQFCFTGRRGLLGNLSTAQIIE----QPQPRPQQSQQAPPPITNLVFMGMGEPLHNPT 56 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-------MIDVALAISLHAPND 239 V A++I+ G +S RVTLST G++P L D V LA+S+HA D Sbjct: 57 AVFAAIDILAHRHGLAMSPSRVTLSTVGLLPQLQHFLDSSRGEGGRARVCLAVSIHAGTD 116 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E+R IVP N + ++ + + V EY +L VND E A L E Sbjct: 117 ELRGAIVPSNTRLSLPPAGFSPSNNTIRPLRAGRYVLFEYTLLRGVNDRPEDAAALLEAT 176 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 KD C NLI +NPFPG Y S+ R+ F KVL + G VR ++GDD AACGQL Sbjct: 177 KDIECSFNLIMFNPFPGTLYSPSTPERLLAFQKVLWAAGRIVHVRLSKGDDGMAACGQL 235 >UniRef50_B1AIK2 Putative uncharacterized protein n=15 Tax=Ureaplasma RepID=B1AIK2_UREP2 Length = 336 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 164/350 (46%), Gaps = 23/350 (6%) Query: 13 TKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 + L+ +++E LG K F + Q+ W+Y NFD+ ++I K LK Sbjct: 4 NNHNLKEIYSLSLNELKEELFKLGLKSFISKQIYSWIYQKRIFNFDKFSNIAKNNVIILK 63 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFC 132 E ++ Q +SDG+IK+ + I + L + G + + Sbjct: 64 ENFSNNLLKINSYQSNSDGSIKFEFLTDKNLIINCMIIKFKNGFLIKINPFGINFKKEII 123 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 NL +E++ Q+ + + K+ ITNV++ G+ + LLN++ V + Sbjct: 124 ---------NLSTNELVLQILLIQQFLDQRKLGN---ITNVIIKGLQDSLLNMDVVSNFI 171 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIV--PIN 249 I+ ++ G + KR++ + TSG+ L K G + + L IS++A N I +I+ +N Sbjct: 172 NIINNENGLNIGKRKIAVWTSGINVDLIKWGQLQNQIELIISMNASNSLIYQKIMLKKLN 231 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 + ++ + ++ Y + +N RV +EY+++D +ND +A++L ELLK+ C + LI Sbjct: 232 QNWSFLKLIEQIKAYTKITN---NRVVLEYLLIDKINDDLNYANELVELLKNILCYVLLI 288 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 P+N Y S + +D F +L R + +D+D + QL Sbjct: 289 PYNL---NNYRTS--ANLDDFFNILSVNKIRISKRIRKSNDLDISFKQLK 333 >UniRef50_D0MX90 Ribosomal RNA large subunit methyltransferase N, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MX90_PHYIN Length = 224 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 13/213 (6%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +++ + F + K A + +++ + F ++ I K LR L E V Sbjct: 13 FDQKALPVFLQKHDFKELHALTIWRYLAQHPDATFADIPGIPKTLRTLLGEHFAHFTTSV 72 Query: 83 VEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 EQRS+DGT+K + + D +E V + R TLCVSSQVGC + C FC+T G Sbjct: 73 TTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGCTFCATGTLGIIA 132 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 +L EI+ Q+ A ++ PI NVV MGMGEPL N + V+ A+ M F Sbjct: 133 DLCSGEILEQLAHANRVA---------PIRNVVFMGMGEPLNNYDAVLAAIRAMT--KVF 181 Query: 202 GLSKRRVTLSTSGVVPALDKLG-DMIDVALAIS 233 GL+ + +TLST GV+ + +L D V LA+S Sbjct: 182 GLAPKYITLSTVGVIHRIRQLSRDAPLVRLALS 214 >UniRef50_Q3EPJ3 Radical SAM family enzyme n=1 Tax=Bacillus thuringiensis serovar israelensis ATCC 35646 RepID=Q3EPJ3_BACTI Length = 246 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 11/239 (4%) Query: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTD 62 E V + + K ++ L +M+++ K+ GE FRA Q+ W+Y N+++M++ Sbjct: 2 ETTVRKQKKNVETKKPSIYSLQIHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSN 61 Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSS 121 ++K LR KL +I + +Q SSDGTIK+ + D +ETV + + ++CV++ Sbjct: 62 LSKGLRDKLSNSFDITTLNTLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVTT 121 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 QVGC + C FC++ G RNL EI+ QV + + + ++++V+MG+GEP Sbjct: 122 QVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALDETE----ERVSSLVVMGIGEP 177 Query: 182 LLNLN--NVVPAMEIMLDDFGFGLSKRRV-TLSTSG--VVPALDKLGDMIDVALAISLH 235 N + N + + + F + R + + T G + L + L + H Sbjct: 178 FDNYDNXNGILTHHLTTEKRSFIIGGRTIRLVRTEGELIPRKFISLLKK-NYKLILRFH 235 >UniRef50_C0QTQ8 Radical SAM enzyme, Cfr family n=4 Tax=Aquificales RepID=C0QTQ8_PERMH Length = 271 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 130/276 (47%), Gaps = 27/276 (9%) Query: 95 WAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVW 153 + I D VE+VY D TLCVSSQ+GC + C FC++ G RNL EII Q Sbjct: 15 FEIETEDHFTVESVYYRGD---TLCVSSQLGCPVRCSFCASGMNGLIRNLSYDEIIDQYR 71 Query: 154 RAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTS 213 A V+ I N+ G+GEPLLN NV A D GL + + T+ Sbjct: 72 IA--------VSEGMEIKNIAFAGIGEPLLNWENVKKAFYHFKD---IGL---KASFYTT 117 Query: 214 GVV-PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK-SNAN 271 G +L ++ +++SLHA DE R +++P + ++ L + +L K S Sbjct: 118 GFPLKNFKELLELPHNGVSLSLHAVTDEKRKQLIPYGQ--PLDQILDVFKDHLSKLSRRK 175 Query: 272 QGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFS 331 + +I Y+++ VND E +L+++ +D ++L+ +N G Y +S+ +R Sbjct: 176 RKMYSIAYLLIGGVNDSEEEIQKLSQIARDLQVGVSLLKYNEIDGIDYRSTSDEEYERVF 235 Query: 332 KVLMSYGFTTIV-RKTRGDDIDAACGQLAGDVIDRT 366 L G + + R I CG L +I+RT Sbjct: 236 LQLRENGIRVTLSNRYRTRKI-GGCGTL---MINRT 267 >UniRef50_UPI00006DCC08 hypothetical protein CdifQ_04003012 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCC08 Length = 183 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 102/186 (54%), Gaps = 10/186 (5%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI L + +++EF K + EKPFR Q+ W+Y FD+M +I K LR KL+EV+ Sbjct: 4 KKIVLKNFTEDELKEFMKTIDEKPFRGSQIFSWIY-KGAKTFDDMNNIPKSLRNKLEEVS 62 Query: 76 EIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCS 133 I ++ + S D T K+ + D + ETV + D R T+CVS+QVGC + C FC+ Sbjct: 63 CIGNIDIELKLESKVDNTKKYLFLLDDGNIIETVMMDYDSRVTVCVSNQVGCRMGCNFCA 122 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 + G RNL EI+ QV + + G + ++N+V+MG GEPL N N ++ Sbjct: 123 STMDGLIRNLEPWEILDQVIKIQEDTG-------KRVSNLVLMGSGEPLDNFENTKQFLK 175 Query: 194 IMLDDF 199 I+ + Sbjct: 176 IINEKK 181 >UniRef50_Q4HQT8 Radical SAM enzyme, Cfr family n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HQT8_CAMUP Length = 286 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 22/189 (11%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+LDL +++ E + + FR Q+ +W+Y D+F +M+++ K LR +L + Sbjct: 6 NILDLLPEELNEKIQPM----FRVKQICQWIYQKYADDFSKMSNLPKNLREELAKNYHFE 61 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDD-------------RATLCVSSQVG 124 + ++E+RS DG+IK+ + D R+E+V +P + + T+CVSSQVG Sbjct: 62 PLKCIKEERSKDGSIKYLFELEDGLRIESVLLPMKEEKFDEEGKRLSHAKFTICVSSQVG 121 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C C FC TA+ G RNL EI+GQ+ + + +R + N+V MGMGEPL N Sbjct: 122 CRSGCSFCLTAKGGLKRNLSAGEIVGQILWIKR---QNHIPYERRV-NIVYMGMGEPLDN 177 Query: 185 LNNVVPAME 193 LNNV A+ Sbjct: 178 LNNVAKAVR 186 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 62/120 (51%) Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E R IV + ++ + E + +V EY+++D +ND EHA +L +LL Sbjct: 161 ERRVNIVYMGMGEPLDNLNNVAKAVREFPIDMRKKVMFEYLLIDGINDKIEHAKELVKLL 220 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 K+NLI +NP G+ Y R + +F +L G T +R+++G DI AACGQL Sbjct: 221 NGIKAKVNLILFNPHQGSIYKRPNLENAVKFQDLLSQKGVTCTIRESKGLDISAACGQLK 280 >UniRef50_C1DT21 Radical SAM enzyme, Cfr family n=3 Tax=Sulfurihydrogenibium RepID=C1DT21_SULAA Length = 276 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 25/287 (8%) Query: 82 VVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 V + + D + I D +E+V R TLCVSSQVGC+++C FC++ G Sbjct: 2 EVVKIINDDLNTLFEIKTDDGYTIESV----HYRKTLCVSSQVGCSIKCSFCASGLNGLT 57 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 RNL EII Q I ++ G+GEPLLN NV A + Sbjct: 58 RNLSFDEIINQYLMVK--------DKGYEIESIAFAGIGEPLLNWENVKQAFDYFKSQ-- 107 Query: 201 FGLSKRRVTLSTSGVV-PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 GLS V+ T+G +L + + +SLH+ +E R ++P + I + Sbjct: 108 -GLS---VSFYTTGFPISNFKQLLALNHDGVNLSLHSVFEEKRKSLIP--NSHTISQLIQ 161 Query: 260 AVRRYLEK-SNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 + +L++ SN + I Y+++ ND E +L E+ K+ ++L+ +N P Sbjct: 162 VFKDHLQQLSNRKKKLYNIAYILIYGENDSYEEIDKLGEIAKELGIGVSLLKYNEIEFFP 221 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIV-RKTRGDDIDAACGQLAGDVID 364 Y + R + L G + K R I CG L + ++ Sbjct: 222 YKSVPDDRYEELFLRLREKGIRVTLSNKYRTRKI-GGCGTLMVNRLE 267 >UniRef50_C5K4P4 Putative uncharacterized protein n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K4P4_9ALVE Length = 242 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 15/176 (8%) Query: 201 FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 FG+ +R +T+ST GV+P + L D V LA+SLHAP +R++IVP K ++I+ +A Sbjct: 5 FGIPQRCITVSTVGVIPRIRSLAHDASGVKLALSLHAPTQALREKIVPSAKAWSIDELMA 64 Query: 260 AVRRYLEKSNANQG------------RVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 AV Y E S V IEYV++ VND E AHQL L+K+ +N Sbjct: 65 AVDEYSEASRVAGRPDGSGGGGRKKGSVMIEYVVIRDVNDTEECAHQLGVLMKNRKAVVN 124 Query: 308 LIPWNPFP-GAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDAACGQLAGD 361 IP+N G+ + S + R +L YG R+ G DIDAACGQLA Sbjct: 125 FIPYNAVDNGSNFEPPLESSVTRMVSILKDVYGVRVYYRRHHGRDIDAACGQLAKK 180 >UniRef50_C1SGI6 Predicted Fe-S-cluster redox enzyme n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGI6_9BACT Length = 256 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 40/279 (14%) Query: 97 IAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRA 155 + + D +ETVY + TLC+S+Q GC + C FC++ + G RNL E+ QV Sbjct: 8 LELSDGFCLETVYY---ESGTLCISTQAGCRMACPFCASGRVGLKRNLSSDELFTQV--- 61 Query: 156 AKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV 215 ++ I V + G+GEPL N V ++ K +S + Sbjct: 62 -------ELHKGNDIKRVTLSGIGEPLDNFEVVKEFIK-----------KSGYPVSVTTS 103 Query: 216 VPALDKLGDMIDV---ALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRR-YLEKSNAN 271 VP +KL +++ + + +S HA DE R +++P + ++ AV + E S Sbjct: 104 VPDTEKLKELLKLSHNGVMLSFHAGFDETRKKLIPKACQ--LDEIFHAVSEVWSEISVNK 161 Query: 272 QGRVTIEYVMLDHVNDGTEHAHQLA-ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRF 330 + +V Y++LD +ND E A ++ ++L+ N G+ + S Sbjct: 162 RKKVGFNYMLLDGINDSAEELDAFAGQVTNFKEVTVHLLVCNDVSGSSFKSPSVCVFTDA 221 Query: 331 SKVLMSYGFTTIV----RKTRGDDIDAACGQLAGDVIDR 365 ++L + G RK+ + CG L + + Sbjct: 222 YELLRNNGLNVRRANNWRKSS----NGGCGTLFLKTLQK 256 >UniRef50_A6GDS6 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDS6_9DELT Length = 291 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 29/303 (9%) Query: 81 EVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 +VEE R DG ++ + + D VE V D +LCVSSQVGCA+ C FC++ G Sbjct: 3 RIVEEHREGDGNRRFVVGLDDGASVEAVLYRLD---SLCVSSQVGCAVGCPFCASGANGL 59 Query: 140 NRNLRVSEIIGQVWRAA-KIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 +R LR+ E+ GQV I + V + G+GEPL N V + + Sbjct: 60 DRPLRLGELTGQVEAVRAHIEATDGPEAALALRRVTVSGVGEPLHNHEPVAQFVRWCRER 119 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLGDMIDV-------ALAISLHAPNDEIRDEIVPINKK 251 +L+TSG L +LG+ +D + S+HA + R VP Sbjct: 120 DMPA------SLTTSGGP--LRRLGEWLDPDAAPPHNGITFSIHAGREATRARTVPRGPA 171 Query: 252 Y-NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 + + L L +S + + + +NDG E E KI+L Sbjct: 172 LGPLFSLLGEAIPRLSRSRKRKLALAYLLLA--DLNDGDEEIDAFLERAAPLGVKIHLYR 229 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI--DAACGQLAGDVIDRTKR 368 +NP P + S++R + + + G R++ I + CG L + R +R Sbjct: 230 YNPVPTSTQAPVSDARYQAIFERVRAVGLDV--RRSSQARIEDNGGCGTLIA--LRRPER 285 Query: 369 TLR 371 LR Sbjct: 286 RLR 288 >UniRef50_B8CKQ7 Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKQ7_SHEPW Length = 137 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 82/125 (65%), Positives = 99/125 (79%), Gaps = 1/125 (0%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 +DL+R+ MR F D+GEKPFRADQ+MKW+YH+ +F++MT+INK LR KL EI AP Sbjct: 1 MDLDRKSMRALFADMGEKPFRADQLMKWLYHFGVSDFEQMTNINKALRAKLARKCEIVAP 60 Query: 81 EVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 ++ Q+S+DGTIK+AI VG+ VETVYIPEDDRATLCVSSQVGCALEC FCST QGF Sbjct: 61 KIASYQKSADGTIKFAIDVGNGQEVETVYIPEDDRATLCVSSQVGCALECTFCSTGAQGF 120 Query: 140 NRNLR 144 NR L Sbjct: 121 NRKLE 125 >UniRef50_Q5UP06 Uncharacterized protein R756 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=YR756_MIMIV Length = 298 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 123/282 (43%), Gaps = 32/282 (11%) Query: 105 ETVYIPEDDRA-TLCVSSQVGCALECKFC---STAQQGFNRNLRVSEIIGQVWRAAKIVG 160 E Y+ +D+ + +SS GC + CKFC +T Q F R++ + E Q+ Sbjct: 22 ECRYVRRNDKYISAYLSSHNGCKMACKFCWLTATNQTNF-RHVSIEEYANQLDTVLSHGK 80 Query: 161 AAKVTGQRPIT-NVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK---RRVTLSTSGVV 216 R + N+ +M GE L N N+V + + + ++K + ++ S ++ Sbjct: 81 EIDGENSRIVRVNINLMSRGEALAN-KNLVNNYDKFHKELQYIINKYDYSEMKMNVSTIM 139 Query: 217 PALDKLGDMID------VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNA 270 P + + +ID V + SL++ N+ R + +P + +Y I A+R+ E Sbjct: 140 PKVVEHKKLIDIFGDRPVNIYYSLYSTNESFRKKWIPNSMRYEI-----ALRKLREFQKE 194 Query: 271 NQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC---KINLIPWNPFPG-APYGRSSNSR 326 + + +++ ND +AE+++ K NL+ +NP P + Y S + Sbjct: 195 TDNTIAFHFAVIEDENDNLSDVQSMAEIIRSMNFSKTKFNLVRFNPHPSMSNYKEPSVEK 254 Query: 327 IDRFSKVLMSYGFTTIVRKTR-------GDDIDAACGQLAGD 361 +++ ++L S ++ R G D+ A+CG + Sbjct: 255 LEKIYEILQSVCNDETIKTNRSRIVPRIGQDVLASCGMFVDN 296 >UniRef50_A7AF87 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AF87_9PORP Length = 260 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 17/203 (8%) Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI 170 +R + VS+ GC + CKFC+T RNL EI+GQV A + G Sbjct: 55 RSERWMIGVSTMSGCPVRCKFCATGNMKRYRNLTADEIVGQVEFAIEQAGFDPCDANEFK 114 Query: 171 TNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVAL 230 N MGEP LN+ V A+ + + + +ST G+ D +V L Sbjct: 115 IN--YTRMGEPFLNIEAVKEAIGRISEIY----PNTHHYVSTIGI-KGSDFSFVKGNVTL 167 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 ISLH+ ++E R+ ++P KK +IE + + TI + VN+ Sbjct: 168 QISLHSFDEEKRNWLIPYPKKMSIEEL-------GRIRTESNLKTTINLTL---VNESDF 217 Query: 291 HAHQLAELLKDTPCKINLIPWNP 313 +L + + L P NP Sbjct: 218 DTEKLEKYFDKEYFFVKLSPINP 240 >UniRef50_UPI0001698B52 radical SAM enzyme, Cfr family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B52 Length = 133 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Query: 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 +SLHAP +E+RD++VPIN+KY +E + A R +++ + ++T EYVMLD +ND +H Sbjct: 1 MSLHAPTNELRDQLVPINQKYPLEELIPACRDFIK--GDKRRKITWEYVMLDGINDSIQH 58 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIV-RKTRGDD 350 A L LL+ TP K+NLIP+NPFPG Y S S G ++ + + G+D Sbjct: 59 AKALIRLLEGTPSKLNLIPFNPFPGTSYKTSPRGAGRGISPAPDESGASSPLPARPAGED 118 Query: 351 ID 352 ID Sbjct: 119 ID 120 >UniRef50_UPI00016C3CF8 hypothetical protein GobsU_10628 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CF8 Length = 313 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 116/310 (37%), Gaps = 44/310 (14%) Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPE-DDRATLCVSSQVGCALECKFCSTA 135 + + + D ++ W R+E Y+ +D +SSQ GCA C+ C Sbjct: 6 LPGAGFTAHKSALDASVNWDRPAEVGRLEARYVRRCEDYFVAYLSSQTGCAQACRMCHLT 65 Query: 136 QQG--------FNRNLRVSEIIGQVWR----AAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 G FN L +E + +R A+ V + P+ + V+ G+ LL Sbjct: 66 ATGQTHLRDTTFNEFLEQAETVLAHYRREGKPARAVHFNLMARGEPLASKVIATRGDELL 125 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM--------IDVALAISLH 235 E+ G GL R + +ST + P GD + S++ Sbjct: 126 G--------ELSRLAVGSGLRPRHL-IST--IYP--KAFGDRALEDVFVVHQPEIHYSIY 172 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQL 295 + ++ R +P K + E L + + S V + + + ND H + Sbjct: 173 SVSERFRRRWLP--KAHPAEVALDRLAAWQRHS---LKLVVLHHAYIAGENDTEGDVHAI 227 Query: 296 AELL--KDTPCKINLIPWNPFPGAPYGR-SSNSRIDRFSKVLMSY--GFTTIVRKTRGDD 350 + L + IN++ +NPF A +G + ++R + + G +V G D Sbjct: 228 CDALEERKLMAHINVVRYNPFDPARHGTEPPEAVVERNAAIYRERLPGARVVVIARVGFD 287 Query: 351 IDAACGQLAG 360 + A+CG G Sbjct: 288 VAASCGMFLG 297 >UniRef50_B9PC33 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9PC33_POPTR Length = 302 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 13/129 (10%) Query: 4 QLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKP----FRADQVMKWMYHYCCDNFDE 59 L+ P+ K L+ L+R++M + +G R Q+ W+Y +F Sbjct: 177 ALLRPDPTVE---KKPLIGLSREEMAQALASIGVPERQVNMRVRQLWHWLYVRGVSDFSR 233 Query: 60 MTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ------RVETVYIPEDD 113 M +I+K LR KL E I PE+VEEQ S DGT KW + + VETVYIPE+D Sbjct: 234 MFNISKELRAKLDEHFTIARPEIVEEQISQDGTRKWLLRFPPRGAGRPVEVETVYIPEED 293 Query: 114 RATLCVSSQ 122 R TLC+SSQ Sbjct: 294 RGTLCISSQ 302 >UniRef50_B3FJU2 Putative uncharacterized protein n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJU2_9CAUD Length = 302 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 110/302 (36%), Gaps = 37/302 (12%) Query: 84 EEQRSSDGTIKWAIAVGD--QRVETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 Q D ++ + D R+E ++ DD + +SSQ GC C+ C G Sbjct: 9 THQSELDRSVNFERKFEDHTGRLEARFVQRVDDYFIVYLSSQTGCKQACRMCWLTATGQT 68 Query: 141 --RNLRVSEIIGQVWRA----AKIVGAAKVTGQRPITNVVMMGMGEPLLN------LNNV 188 R++ V E Q R +V V + M GEPL N + + Sbjct: 69 DSRDVTVQEYFEQAERVFDHYIDMVRNNHVGSAATKVHFNFMARGEPLANKHFVENADEI 128 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTS-----GVVPALDKLGD-MIDVALAISLHAPNDEIR 242 + ++ M + +G + +ST G D D + L SL++ N + R Sbjct: 129 LRGLKRMAEQWGLEA---KFLISTIWPKEFGFTKLTDVFTDPEVYPELYYSLYSLNPKFR 185 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 + +P K ET L ++ + E + I Y ++ ND + + +K+ Sbjct: 186 KQWLP--KAAAPETALDELKCWQEATGKTPK---IHYAFINDQNDSIGDVKAIIDEIKEV 240 Query: 303 PCKI--NLIPWNPFPGAPYGRSSNSRIDR----FSKVLMSYGFTTIVRKTRGDDIDAACG 356 K+ N++ +NP G + + L I R G D+ A+CG Sbjct: 241 GLKVNWNIVRYNPPEGHYSKEPVEGHVKYLHGFIQRHLPDAKVKLIPRV--GTDVKASCG 298 Query: 357 QL 358 Sbjct: 299 TF 300 >UniRef50_A7HKB3 Radical SAM domain protein n=12 Tax=cellular organisms RepID=A7HKB3_FERNB Length = 329 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 109/288 (37%), Gaps = 38/288 (13%) Query: 104 VETVY--IPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGA 161 VE+V IP D + L VS+ GC + CK C + R L EI+ Q+ + Sbjct: 46 VESVQPPIPRDKKWVLIVSTMDGCPVGCKMCDAG-GYYKRRLSKEEILAQILYLIRSRYE 104 Query: 162 AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA--- 218 +V ++ + +GEP LN + V+ ++ + ++ST + Sbjct: 105 DEVPVEKFK--IQFARVGEPALN-DEVLKVLDEL--PQIIDAPGLMPSISTVAPIGRNGW 159 Query: 219 LDKLGD------MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ 272 ++L + L S+H+ +++ RDEI+P+ KK++ +++ Sbjct: 160 FERLIEIKEKHYRGKFQLQFSIHSTDEKQRDEIIPV-KKWSFREISEYGEKFVTT---ED 215 Query: 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF-----PGAPYGRSSNSRI 327 ++T+ + + A + I + P NP G + + Sbjct: 216 RKITLNFALAKE---NIADARVIMNFFNPEKFLIKITPVNPTYRSIENGLNSDVTGEGLV 272 Query: 328 ---DRFSKVLMSYGFTTIVRKTRG----DDIDAACGQLAGDVIDRTKR 368 F L G+ I+ + G + I + CGQ ++ K+ Sbjct: 273 LEHREFVDKLRESGYDVII--SVGELEENKIGSNCGQYVQRHLNAQKK 318 >UniRef50_D0MX91 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MX91_PHYIN Length = 170 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 281 MLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLMS-YG 338 ML VND E AH L +LL++ +NLIP+N GA + S I F VL Y Sbjct: 1 MLAGVNDSIETAHTLGKLLQNRSVHVNLIPYNTTDVGAQFQSPSAEDIRAFHAVLREPYN 60 Query: 339 FTTIVRKTRGDDIDAACGQLA 359 +R+ G DID ACGQLA Sbjct: 61 LKATIRENHGTDIDGACGQLA 81 >UniRef50_UPI000190F78A hypothetical protein Salmonentericaenterica_19178 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E01-6750 RepID=UPI000190F78A Length = 64 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 62/64 (96%), Positives = 63/64 (98%) Query: 321 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAID 380 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGE ID Sbjct: 1 RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEVID 60 Query: 381 IKAV 384 IKA+ Sbjct: 61 IKAI 64 >UniRef50_C7RH90 Fe-S-cluster redox enzyme-like protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RH90_ANAPD Length = 322 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 98/260 (37%), Gaps = 31/260 (11%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGA 161 +RVE + + +D+ + VSSQ GC + C FC + GF+ N V+E+I ++ + G Sbjct: 46 ERVENIEVDLNDKLVVTVSSQKGCPMNCNFCDCPKLGFHGNSSVAELISEISTGIALSGV 105 Query: 162 AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDK 221 NV MGEP N NV+ + +I+ + + +ST + + Sbjct: 106 KDGQRL----NVHYARMGEPTFNF-NVIESAKIVGEFANKHFKEYHPVVSTM-LPKDNKR 159 Query: 222 LGDMI--------------DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK 267 L + + L S++ +E R++ NK +++ ++ Sbjct: 160 LEKFLLEWTSLMKSNNWNGGLGLQFSINTLYEEDRNKAF-DNKSLSLQQISDLAKKLPNP 218 Query: 268 SNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP---GAPYGRSSN 324 + T+ + + +++ + + + P + Y Sbjct: 219 VGR---KYTLNFAVTSE---SDLDVNKMNKYFDKEKFVVKITPIHETKRAIENKYEIVKE 272 Query: 325 -SRIDRFSKVLMSYGFTTIV 343 ++F K L+ G+ IV Sbjct: 273 FDVYEKFEKPLVEDGWDVIV 292 >UniRef50_C5K6S8 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K6S8_9ALVE Length = 92 Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 6/89 (6%) Query: 290 EHAHQLAELLKDTP------CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIV 343 HA LA+L+KD P INL+P+N ++F +L + G TT Sbjct: 3 RHARALAQLIKDRPKQTSYLYHINLLPYNEARDVSTAFKRCEDWNQFQSILTNEGITTSF 62 Query: 344 RKTRGDDIDAACGQLAGDVIDRTKRTLRK 372 R + G IDAACGQL + + Sbjct: 63 RNSFGRSIDAACGQLYATYEAKNALKRKP 91 >UniRef50_C6AJK7 Protein YfgB n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AJK7_AGGAN Length = 77 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 41/72 (56%), Positives = 52/72 (72%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M EQ + K+NL++L R QMREFF +LGEKPFRADQ++KW+YH+ DNFD M Sbjct: 1 MLEQPIANAAGADVAKKVNLMNLTRAQMREFFAELGEKPFRADQLVKWIYHFGEDNFDNM 60 Query: 61 TDINKVLRGKLK 72 T++NK LR KLK Sbjct: 61 TNLNKKLREKLK 72 >UniRef50_UPI0001BCD1E1 ribosomal RNA large subunit methyltransferase N n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD1E1 Length = 132 Score = 84.5 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 9/119 (7%) Query: 10 NVTTKDGKI--NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 GK +L DL+ ++ +LGE FR QV Y + MTD+ Sbjct: 14 EAPRGRGKPPRHLADLSTEERTAAAAELGEPAFRVKQVAHHYYARLERDPAAMTDLPAAN 73 Query: 68 RGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPE-----DDRATLCV 119 R ++ + V + G T+K + D VE+V + RAT+CV Sbjct: 74 RDRIAAALLPTLLDPVRTMEADRGTTVKNLWRLFDGALVESVLMRYLSADGPGRATICV 132 >UniRef50_C0B8Y0 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B8Y0_9FIRM Length = 85 Score = 81.8 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 43/71 (60%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K ++ + ++++E +GEK FR+ Q+ W++ D+F+EMT++ K LR KL+ Sbjct: 2 EKKDIASYSFEELQEEMLAIGEKGFRSRQIYSWIHEKLVDDFEEMTNLPKTLRQKLESAY 61 Query: 76 EIRAPEVVEEQ 86 EIR E+ + + Sbjct: 62 EIRRVEMEKYR 72 >UniRef50_UPI0001910DA9 hypothetical protein Salmonellaentericaenterica_44633 n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI0001910DA9 Length = 56 Score = 74.9 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 44/56 (78%), Positives = 48/56 (85%), Gaps = 4/56 (7%) Query: 1 MSEQLVTPENVTT----KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHY 52 MSEQ+VTPE+ T + KINLLDLNRQQMREFFK+LGEKPFRADQVMKWMYHY Sbjct: 1 MSEQIVTPESSTPVVLNNETKINLLDLNRQQMREFFKNLGEKPFRADQVMKWMYHY 56 >UniRef50_C1FL59 Glycyl-radical enzyme activating family protein n=17 Tax=Clostridiales RepID=C1FL59_CLOBJ Length = 301 Score = 70.3 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 93/275 (33%), Gaps = 63/275 (22%) Query: 108 YIPEDDRATLCVSSQVGCALE---------------CKFCSTAQQGFNRN--------LR 144 + ++R T C C + C FC N L Sbjct: 48 IMFFEERCTACGICVKRCPQKVITMKNNIPMVDEGKCNFCGKCTNFCPNNAREYVGKDLT 107 Query: 145 VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME-IMLDDFGFGL 203 EII ++ + + V G GEP+L+ + + I+ + G+ Sbjct: 108 SQEIIKEIIKDEVFYEQSGGG-------VTFSG-GEPMLHAD----FINGILEECKARGI 155 Query: 204 SKRRVTLSTSGVV--PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAV 261 T+ TSG V +K+ D +D+ L L + N+EI + + +E + Sbjct: 156 ---HTTIDTSGYVSWDKFEKVRDKVDLFL-YDLKSMNNEIHKKYTGVENTIILENL-ELL 210 Query: 262 RRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNPFPGAPYG 320 +Y + + ++ VND ++ + + + ++NL+P++ Y Sbjct: 211 SKY-------GHNIYLRIPIIKDVNDNNKNIDETIKFISKLHLIQVNLLPYHKMGMDKYK 263 Query: 321 R------------SSNSRIDRFSKVLMSYGFTTIV 343 R S+ +++ ++ G + Sbjct: 264 RLKMEYKLTGEEKPSDEKMNEIAEKFKQAGIKVKI 298 >UniRef50_Q97JT3 Predicted Fe-S-cluster redox enzyme, YLON B.subtilis homolog n=2 Tax=Bacteria RepID=Q97JT3_CLOAB Length = 337 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 83/257 (32%), Gaps = 36/257 (14%) Query: 110 PEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 P + + +S+Q GC CKFC + G N+ +++ Q+ +A + ++ Sbjct: 63 PLTKKWVVTMSTQYGCDSGCKFCDVPKVGKGVNVTYNDLKTQLEQALNL--HPEIDRTER 120 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRV-TLSTSGVVPALDKLGDMI-- 226 + N+ MGEP N + V+ + + + + + + T+ L I Sbjct: 121 L-NIHYARMGEPSWNND-VLDFTRNLKNIVKPYIGESLIHPVFTTMCPNKNKFLAHRINE 178 Query: 227 -----------DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRV 275 D L +S+++ N+ R + + + + + + Sbjct: 179 WVDIKNNLFQGDAGLQLSINSTNENQRRD-MFRGNALTLNEISSIGNDLPMPKGR-KYCL 236 Query: 276 TIEYVMLDHVNDGTE-HAHQLAELLKDTPCKINLIPW--------NPFPGAPYGRSSNSR 326 D E A L +L + + + P N G S + Sbjct: 237 NFALA------DEYEVDAKVLKKLFDPSKFMVKITPLHKTVSSIENDIKTTK-GYVSYTP 289 Query: 327 IDRFSKVLMSYGFTTIV 343 L GF +V Sbjct: 290 YKDIENDLKKMGFDVLV 306 >UniRef50_C3WY92 Fe-S oxidoreductase n=12 Tax=Fusobacterium RepID=C3WY92_9FUSO Length = 287 Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 30/228 (13%) Query: 125 CALECKFCSTA-----QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 C L C FC Q R ++EI+ ++ K + V G G Sbjct: 28 CNLNCIFCECGATKKIQLKRQRFKDMNEILNEIQSVLKDIKPDY---------VTFSGSG 78 Query: 180 EPLLNLN--NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAI-SLH 235 EP L+L+ N+ A++ L G ++ L T+ ++ A ++ ++ + L I +L+ Sbjct: 79 EPTLSLDLGNISKAIKKDLKFKG------KICLITNSLLLADKQVIKELEYIDLIIPTLN 132 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQL 295 +I ++IV + + +++ ++ +G++ IE +L+++ND E+ ++ Sbjct: 133 TLRQDIFEKIVRPDYRTSVDEIRKGFIN--LNNSNYKGKIWIEIFILENINDNEENFIEI 190 Query: 296 AELLKDTPCKINLIPWNPFP----GAPYGRSSNSRIDRFSKVLMSYGF 339 A L + + I N S +I + K+L G Sbjct: 191 ANFLNSENIRYDRIQLNTIDRVGAERDLKAISFDKILKAKKILEENGL 238 >UniRef50_O67929 Molybdenum cofactor biosynthesis protein A n=2 Tax=Aquificaceae RepID=MOAA_AQUAE Length = 320 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 21/189 (11%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C L C FC G N Q+ +I K+ + + V + G GEPLL Sbjct: 21 CNLRCNFCM--PPGKEYNFLPK---RQLLTPEEIEEYVKIFAKLGVEKVRLTG-GEPLLR 74 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLGDMIDVALAISLHAPNDEIR 242 + + ++ + G + + L+T+GV L L + + +S+H+ N E Sbjct: 75 ED-LEEIIQRISKVEGI----KDIALTTNGVFLKERLKALKEAGLKRITVSVHSLNPEKN 129 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 ++V N+ N+ + ++ +V + V++ ND + LA K+ Sbjct: 130 QKLV--NRSVNLGEVFEVI----IRAKELGFKVKVNSVIIKGFND--DEILDLARFFKNL 181 Query: 303 PCKINLIPW 311 + I + Sbjct: 182 GVTLRFIEY 190 >UniRef50_UPI0001978349 hypothetical protein HcanM9_08523 n=1 Tax=Helicobacter canadensis MIT 98-5491 RepID=UPI0001978349 Length = 52 Score = 62.2 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 K N+ + + KD FRA Q+ W+Y + ++F++M ++ K LR Sbjct: 3 KQNVFGFTLNSLSDSLKD--FPKFRAKQIYHWLYVHYENDFEKMENLPKNLR 52 >UniRef50_C2BHE9 [formate-C-acetyltransferase]-activating enzyme n=2 Tax=Anaerococcus RepID=C2BHE9_9FIRM Length = 239 Score = 61.0 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 90/254 (35%), Gaps = 62/254 (24%) Query: 102 QRVETV-YIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAK 157 +ET+ + T+ S GC L C FC T + R++ V EI+ RA + Sbjct: 5 HSIETMGLVDGPGIRTVFFLS--GCPLRCVFCHNPDTQSLDYGRDVTVEEIVK---RALR 59 Query: 158 IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV-- 215 + K G ++ GEPL + V+ + + + V + TSGV Sbjct: 60 MKPYFKNGGGVTLSG------GEPLASGAFVLETIRALHKE------AIHVAVDTSGVGD 107 Query: 216 ---VPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS---- 268 + + D+I + + K Y+ F + Y +K Sbjct: 108 EKYYDDIAREADLILLDI-------------------KHYDPYFFYEITKNYQDKLIKFM 148 Query: 269 ---NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC---KINLIPWNPFP------- 315 RV I +VM+ V D E L + ++ KI ++P++ Sbjct: 149 ESIKKTDTRVWIRHVMMPFVTDTKEDMDGLVDFIRPIKANIDKIEILPYHKLGVCKYADL 208 Query: 316 GAPYGRSSNSRIDR 329 G PY + +D+ Sbjct: 209 GKPYRIKNMEAMDK 222 >UniRef50_UPI0001BC586B Fe-S oxidoreductase n=3 Tax=Fusobacterium RepID=UPI0001BC586B Length = 275 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 79/224 (35%), Gaps = 24/224 (10%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI--TNVVMMGMGEPL 182 C L C FC I Q + + + V G GEP Sbjct: 28 CNLNCVFCECGPTK------DWTIERQHFISYDEFIQELEEALTDVVPDYVTFSGSGEPT 81 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLST-SGVVPALDKLGDMIDVALAI-SLHAPNDE 240 L+L+ + + + + ++ + T S ++ D L ++ + L + SLH E Sbjct: 82 LSLD-LGKIIRYIKKEH----PSIKIAVITNSLLLHREDVLEEIQEADLIMPSLHTVRQE 136 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 I ++IV + Y IET L +++ +G + +E +++ +N A +K Sbjct: 137 IFEKIVRVYPNYRIETVLEGLQKLCSC---FRGNIDLELFLIEGLNTSFSDLKAYATFVK 193 Query: 301 DTPCKINLIPWN----PFPGAPYGRSSNSRIDRFSKVLMSYGFT 340 + + N P + ++ + L G + Sbjct: 194 TLSYRK--LQLNSLDRPGTESWVKPVPYHKLLEIKEYLEQEGLS 235 >UniRef50_B8DR83 Nitrogenase cofactor biosynthesis protein NifB n=9 Tax=Bacteria RepID=B8DR83_DESVM Length = 427 Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 86/222 (38%), Gaps = 26/222 (11%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG--AAKVTGQRPITNVVMMGMGEPL 182 C ++C +C+ N + R + V + + + IT + + G G+P+ Sbjct: 33 CNIQCGYCNRKYDCVNES-RPG-VTSAVLSPRQALDYVDKVLAADPRITVIGIAGPGDPM 90 Query: 183 LNLNNVVPAMEIMLD---DFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPND 239 N + + ++ + + F LS + G+ P LD+L ++ + ++++A + Sbjct: 91 ANPAETLETLRLVHERHPELLFCLSSNGL-----GLPPHLDRLKELGVTHVTVTINAVDP 145 Query: 240 EIRDEIVPINK--------KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 I +++ + + E LA + V + +++ VND H Sbjct: 146 AIGEKLYSWVRDDKVVWRGREAAELLLARQLESVRGLVERGMVVKVNTILVPGVNDR--H 203 Query: 292 AHQLAELLKDTPCKI-NLIPWNPFPGAPYGR---SSNSRIDR 329 ++A ++ + I N+IP P P + ++ Sbjct: 204 VEEVARVVGELGATIQNIIPLKPTADTPLAHLPEPDAAVVNA 245 >UniRef50_B8DNV6 Radical SAM domain protein n=13 Tax=Desulfovibrionales RepID=B8DNV6_DESVM Length = 511 Score = 58.0 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 91/283 (32%), Gaps = 53/283 (18%) Query: 43 DQVMKWMYHYCCDN--FDEMTDIN-KVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV 99 QV + ++ + + M L L + Sbjct: 130 RQVFRGVHRRKVEQTARELMRRYPDNRLMQHLTAKCALTYSCPAARNLCL---------- 179 Query: 100 GDQRVET---VYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAA 156 R E V + R C+S Q + C+T Q +EI+ + A Sbjct: 180 --GRYEAPLPVSRACNARCVGCISQQ---EAGSRICATPQNRMAFTPTAAEIVEVMRHHA 234 Query: 157 KIVGAAKVTGQRPITNVVMM-GMG---EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTL-- 210 + A V G G EPL + A+ + + G G T+ Sbjct: 235 RNEVAEP----------VFSFGQGCEGEPLTEAPLIEEAVRLFRAEGGRG------TVNL 278 Query: 211 -STSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKY-NIETFLAAVRRYLEKS 268 S + + A++++ +L +SL++ +E P N+ Y LA VR + + Sbjct: 279 NSNASLPGAVERIAGAGLTSLRVSLNSAREE------PYNRYYRPHGYTLADVRESIATA 332 Query: 269 NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 N V++ + + D L ++++ C ++ I Sbjct: 333 RRNGVFVSLNLLYFPGITDTEPELEALLDMVR--TCGVSFIQL 373 >UniRef50_C0QGR9 PflC1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QGR9_DESAH Length = 302 Score = 57.2 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 82/271 (30%), Gaps = 53/271 (19%) Query: 108 YIPEDDRATLCVSSQVGCALE----------------CKFCSTAQQGFNRNLRVSEIIGQ 151 + D + C C C C N E++G+ Sbjct: 48 IVRYDKKCIGCGKCVKACPQGALEISSSDSIVLDAKKCIACGKCVDVCCAN--AIEMVGK 105 Query: 152 VWRAAKIVGAAKVT---GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRV 208 + ++ V G GEPL V +++ + Sbjct: 106 TFSPREVADITLKDVAFYDESGGGVTFSG-GEPLFQWQFVRECSKLLRKRGV------HI 158 Query: 209 TLSTSGVVPA--LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLE 266 + TSG V + ++ +D+ L H I P+ + ++ LE Sbjct: 159 AMETSGCVKEDIIKEIAPHVDLFLYDLKH---------IDPVEHRKYCGIRNESILDNLE 209 Query: 267 KSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIP--------WNPFPG 316 + + I V++ VND +L E LK I+L+P +N Sbjct: 210 LLSRMGKEIIIRMVVIPGVNDSPGTVERLCEFLKGIIGIRYISLLPLHKSATEKYNRLDK 269 Query: 317 ----APYGRSSNSRIDRFSKVLMSYGFTTIV 343 + + ++ + +++ S GFT + Sbjct: 270 EFLLSDFEVPNDEEVKAIAEIFQSKGFTVQI 300 >UniRef50_Q080J6 Pyruvate formate-lyase activating enzyme n=12 Tax=Bacteria RepID=Q080J6_SHEFN Length = 245 Score = 57.2 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 85/240 (35%), Gaps = 44/240 (18%) Query: 124 GCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE 180 GC + C++C T + + V EI+ QV + A+ + G GE Sbjct: 28 GCLMRCQYCHNRDTWDLDGGKEVSVDEIMSQVISYQPFLEASGGG-------ITASG-GE 79 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV----PALDKLGDMIDVALAISLHA 236 +L V + L T+G V P +D+L D D+ L + + Sbjct: 80 AILQAQFVSELFKACKSQGV------HTCLDTNGFVRKYEPVIDELLDNTDLVL-LDIKQ 132 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 +D E+ ++ ++ +YL N + I YV++ + E A LA Sbjct: 133 MDDAKHIELTKVSNHRTLQ-----FAQYLATRNI---KTWIRYVVVAGFTEDVESAIALA 184 Query: 297 ELLKDTPC--KINLIPWNPFPGAPYG------------RSSNSRIDRFSKVLMSYGFTTI 342 E +K K+ L+P++P + S + R +V + G Sbjct: 185 EFIKPMSNVEKVELLPYHPLGEHKWQAFGETYTLADISPPSTEIMQRIQQVFVDRGINAT 244 >UniRef50_A8AAC8 Radical SAM domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAC8_IGNH4 Length = 352 Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 84/228 (36%), Gaps = 33/228 (14%) Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 TL VS C C FC + G E A+ T + + V Sbjct: 12 TLRVSVTERCNFNCIFCHSEGAGRG---SFDE-----LSVNDYDMIAEATSRLGLKYVKF 63 Query: 176 MGMGEPLL--NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKLGDMIDVALA 231 G GEPLL +L ++ + + + GF ++++T+G + + L + + Sbjct: 64 TG-GEPLLRSDLEEIIHSFK----EHGFE----EISITTNGFLLPERTEGLKEAGVSWIN 114 Query: 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 +SLH+ R ++ L V +EK+ N V + V+L +N + Sbjct: 115 VSLHS---LKRQRF----RRITGVDALNRVLNGIEKALENGIEVRVNVVVLRGIN--EDE 165 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPY---GRSSNSRIDRFSKVLMS 336 ++ + +++I +P + R S I+R K L Sbjct: 166 VEEIVKYAIGKGASVHVIELHPVGNGAHIFRERHSREPIERLKKWLEE 213 >UniRef50_A4YHJ1 Wyosine base formation n=2 Tax=Archaea RepID=A4YHJ1_METS5 Length = 364 Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 25/194 (12%) Query: 153 WRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVT--L 210 + + V K ++V + GEP L + + KR +T L Sbjct: 120 YLGREGVENNKALEAMKPSHVAISLTGEPTL-YERIGELIREYH--------KRGITTFL 170 Query: 211 STSGVVPALDKLGDMIDVALAISLHAPNDEIRDEI-VP-INKKYNIETFLAAVRRYLEKS 268 TSGV P + + L +SL APN+E I P + +N+ + + S Sbjct: 171 VTSGVRPDVLASLEEEPSQLFVSLQAPNEEKHRLINRPVVANSWNL--VMKTLEILPSFS 228 Query: 269 NANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-DTPCKINLIPWNPFPGAPYG-----RS 322 + R+T M+ VN + A + A+L++ P I + + + Y Sbjct: 229 SPTVIRMT----MMKEVNMSDDDAREFAKLMRIAMPTYIEVKAYMHVGPSTYRLTKDAMP 284 Query: 323 SNSRIDRFSKVLMS 336 +S + F++ L Sbjct: 285 RHSEVRFFAEKLAE 298 >UniRef50_B6YRJ3 Nitrogenase molybdenum-cofactor biosynthesis protein NifB n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YRJ3_AZOPC Length = 419 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 90/236 (38%), Gaps = 38/236 (16%) Query: 125 CALECKFCSTAQQGFNRN--------LRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMM 176 C ++C +C N + L Q K + I+ + + Sbjct: 26 CNVQCNYCDRRYDCCNESRPGVSSMLLSP----DQALYFLKALSEKMPN----ISVIGIA 77 Query: 177 GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VPALDKLGDMIDVALAISL 234 G G+P + + + ++ + ++ + LST+G+ P +D+L ++ L I++ Sbjct: 78 GPGDPFASPEITMRTVRLVKKE----FPEKIMCLSTNGLDLFPYIDELVEIGLSHLTITI 133 Query: 235 HAPNDEIRDEI---VPINKK-YNIET----FLAAVRRYLEKSNANQGRVTIEYVMLDHVN 286 ++ E ++ V NK+ Y E L R L+++ V I V+ +N Sbjct: 134 NSVKSETLAKLYRWVRYNKRVYRGEAGGDILLEQQLRCLQRTKERCIVVKINTVICPGIN 193 Query: 287 DG--TEHAHQLAELLKDTPCKINLIPWNPFPGAPYGR---SSNSRIDRFSKVLMSY 337 D E A ++A+L DT +N IP P + S + V+ + Sbjct: 194 DSEVEEIAQKVADLGADT---MNCIPLYPVENTEFAFLPIPSEEAMGEIKSVVAQH 246 >UniRef50_B1C5Q0 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5Q0_9FIRM Length = 303 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 86/237 (36%), Gaps = 44/237 (18%) Query: 128 ECKFC-----STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL 182 +C C +TA + + +NL + EI+ K+ + V + G GEPL Sbjct: 88 KCMLCVDNCYATALKVYGKNLTIDEIVS-------KCMEDKLFYETSNGGVTLSG-GEPL 139 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVP--ALDKLGDMIDVALAISLHAPNDE 240 A EI+ G+ + T+G V + K+ D +D+ L + A N + Sbjct: 140 FQFEA---AHEILSRLKSKGI---HTAIETTGYVSNENIKKIMDYVDLFL-FDIKAVNID 192 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 + ++ + RYL++ N N + I ++ +ND + + +K Sbjct: 193 KHKRLTGVDNHIIHDNL-----RYLDEHNKN---IIIRVPVIPSLNDSKDDMLNIINFVK 244 Query: 301 DTPCK--INLIPWNPFPGAPYG------------RSSNSRIDRFSKVLMSYGFTTIV 343 + K +NL+P++ Y + ++ K+ V Sbjct: 245 NLKNKHQVNLLPYHRLGLYKYEVLKRDYELKDITPPKDDYMNSILKMFKENDIECQV 301 >UniRef50_A7ZEI0 Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Campylobacter concisus 13826 RepID=A7ZEI0_CAMC1 Length = 275 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 98/263 (37%), Gaps = 53/263 (20%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV--TGQRPITNVVMMGMGEPL 182 C ++C FC+ N N R + +V + V + ++ I+ + + G G+P+ Sbjct: 34 CNIQCNFCNRIYDCANEN-RPG-VTAKVQTPDESVKFLEKLFKFRQDISVIGIAGPGDPM 91 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV-----VPALDKLGDMIDVALAISLHAP 237 + + + E + LST+G+ V + +LG + ++++A Sbjct: 92 CDADKTLATFEKCKS----HFPNALLCLSTNGLALPEHVDEIVRLGVS---HVTVTVNAV 144 Query: 238 NDEIRDEIVP----INKKYNIET----FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGT 289 ++ ++ K Y E LA + + K V I V++ VN Sbjct: 145 TPDVGSKVYSWVRYEGKNYYGEEAARILLARQDKGIRKLKEAGMLVKINTVVIPGVN--I 202 Query: 290 EHAHQLAELLKDTPCKI-N---LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRK 345 +H ++ K I N +IP + P S I R +R+ Sbjct: 203 DHVQSISAKAKQWGADIMNCMAMIPVHDTPFENLKSPSTEEIHR-------------IRR 249 Query: 346 TRGDDID---------A-ACGQL 358 + GDDID A ACG+L Sbjct: 250 SIGDDIDQMTHCSRCRADACGKL 272 >UniRef50_A5G750 Radical SAM domain protein n=8 Tax=cellular organisms RepID=A5G750_GEOUR Length = 313 Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 83/230 (36%), Gaps = 29/230 (12%) Query: 120 SSQVGCALECKFCSTAQQ-----GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 + C C +C + EI +V ++ I + Sbjct: 21 ITPKVCTYSCVYCQVGRTIKTQVDRRAFYWPEEIAAEVENKVRVAR----ENGEQIDYLT 76 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVT----LSTSGVVPALDKLGDMIDVAL 230 + GEP L++ N+ +E++ G ++ +T + S V AL K + + + + Sbjct: 77 FVADGEPTLDI-NLAREIELLR-PLGIRIAV--ITNASLIWRSDVAEALRK-ANWVSLKV 131 Query: 231 AISLHAPNDEIR-DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGT 289 D +R D +N+ + F+ + + + G + E +++ +ND Sbjct: 132 --------DTVREDVWRKLNRPSPLLEFMDLLTGMIGFAKRYGGELATETMLVKGLNDAE 183 Query: 290 EHAHQLAELLKDT-PCKINL-IPWNPFPGAPYGRSSNSRIDRFSKVLMSY 337 EH LA+ L P K L IP P S ++R ++L Sbjct: 184 EHLELLADFLMALKPAKAYLAIPTRPPAELWVKPPSEETVNRAFQILRRK 233 >UniRef50_C5A4P1 Radical SAM protein, elongator protein 3/MiaB/NifB related n=6 Tax=Thermococcus RepID=C5A4P1_THEGJ Length = 419 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 84/231 (36%), Gaps = 41/231 (17%) Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GC L C FCS + ++R ++ ++ + A++ G+ ++ G GEPL+ Sbjct: 124 GCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGKGLEAHLD--GQGEPLI 181 Query: 184 NLN---NVVPAMEIMLDDFGFGLS-KRRVTLSTSGVVPALDKLGDMIDVALAISLHAPND 239 +V A+ +S + TL T +V ++L + + +S+H+ + Sbjct: 182 -YPFRVELVQALR--EHPNVSVISMQSNGTLLTDKLV---EELAEAGLDRVNLSIHSLDP 235 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E ++ K Y+++ L + V I V++ +ND + A E Sbjct: 236 EKAKMLM-GMKSYDLDHVLEMAEALV----NAGIDVLIAPVIIFGIND--DEAEAFIEFA 288 Query: 300 KDTPC--------KINLIPW----NPF--PGAPYGRSSNSRIDRFSKVLMS 336 + N +P+ NP P+ F L Sbjct: 289 RKIGAGKRWPALGFQNYVPYKFGRNPVIAKPVPFK--------EFYAWLRR 331 >UniRef50_C5CI47 Radical SAM domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI47_KOSOT Length = 319 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 83/246 (33%), Gaps = 62/246 (25%) Query: 125 CALECKFCSTAQQGFNRNLR-----VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 C C +C + N R +EI+G++ K+ + ++ G Sbjct: 37 CNYSCVYCQLGRTTKVCNTRQSFYPTNEILGELEEFLKVHNENEYDVITLVSE------G 90 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAI-SL---H 235 EPLL R + + ++ + +L V + SL Sbjct: 91 EPLL---------------------YRPIDI----IISGIKRLSKKPVVVITNGSLFYDE 125 Query: 236 APNDEIR--DEIVP------------INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVM 281 +E+R D I+P IN+ + +F + LE N G V +E ++ Sbjct: 126 NVRNEVRQADIIMPTLDAWDDESFKRINRPFGKLSFEEVYKGLLELRNLFPGEVWLEVML 185 Query: 282 LDHVNDGTEHAHQLAE---LLKDTPCKINLIPWNPFPGAPYGRSSNSRIDR----FSKVL 334 + +ND E +L E LK +N+ P P + I + F+ + Sbjct: 186 VKGLNDSKEQLERLTERIARLKPDRVYVNV-PLRPPAEPWVEKPDEVTIKQARELFNAIS 244 Query: 335 MSYGFT 340 + G Sbjct: 245 IEKGAP 250 >UniRef50_Q9V177 MooA-like molybdenum cofactor biosynthesis protein A related n=3 Tax=Pyrococcus RepID=Q9V177_PYRAB Length = 419 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 39/230 (16%) Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GC + C FCS + ++R ++ ++ + K + + + GEPLL Sbjct: 124 GCNMRCIFCSVDEGPYSRTRKLDFVVD-IDYLLKWFDWVAKEKGKGLE-AHLDAQGEPLL 181 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV---PALDKLGDMIDVALAISLHAPNDE 240 +V ++ + + + +++ ++GV+ +++L + + +S+H+ + E Sbjct: 182 -YPFIVELVQALREHPHVSV----ISMQSNGVLLNDKLVEELAEAGLDRVNLSIHSLDPE 236 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 ++ I K Y++ L + V I V++ VND + A E + Sbjct: 237 KAKMLMGI-KDYDLNHVLEMAEALV----NAGIDVLIAPVIMFGVND--DEAEAFIEFAR 289 Query: 301 DTPC--------KINLIPW----NPF--PGAPYGRSSNSRIDRFSKVLMS 336 N IP+ NP P+ F + L Sbjct: 290 RIGAGKRWPALGFQNYIPYKFGRNPVIAKPVPFK--------EFYRWLRE 331 >UniRef50_O27899 Nitrogenase iron-molybdenum cofactor biosynthesis protein NifB n=2 Tax=Methanobacteriaceae RepID=O27899_METTH Length = 288 Score = 54.9 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 32/250 (12%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C + CKFC+ R R + I KV + PI+ + + G G+ L N Sbjct: 38 CNIHCKFCTRDINECER--RPGVTGRLMTADDAIKHVEKVKEEMPISVIGVAGPGDALAN 95 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKLGDMIDVALAISLHAPNDEIR 242 + F L +ST+G + D+L ++ + ++++A + EI Sbjct: 96 -EETFEFFKKASKKFPDLLK----CMSTNGLLLPDRADELAELGINTVTVTVNAVDPEIG 150 Query: 243 DEIVP----INKKYNIETFLAAVR----RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 ++I +K Y+ + +EK V + V++ +ND EH Sbjct: 151 EKIYSFVVYKDKVYHGREAFEVLSRNQLEGIEKLAERGIIVKVNSVLIPGLND--EHIVD 208 Query: 295 LAELLKDTPCK-INLIPWNPFPGA-PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDID 352 +A +K +N+IP P Y R + +I+R + + R Sbjct: 209 IAREVKKRGASLMNIIPLIPMGEMKDYPRPTCEQIERVRNEVEK--IIPVFR-------- 258 Query: 353 AACGQLAGDV 362 AC Q D Sbjct: 259 -ACTQCRADA 267 >UniRef50_D1N689 Radical SAM domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N689_9BACT Length = 321 Score = 54.5 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 79/227 (34%), Gaps = 39/227 (17%) Query: 125 CALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 C+L+C +C T R E + V + + ++G+ + + G GEP Sbjct: 29 CSLDCIYCEARQTTCLTLERK----EYVP-VDAVIRELDEV-LSGKPELDFITFSGSGEP 82 Query: 182 LLN--LNNVVPAME-------IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAI 232 LN + VV ++ + L GF L P + + ID + Sbjct: 83 TLNSGIGRVVDFLKTRYPQYPVCLLTNGFALGD-----------PEVRREIARID-RVVP 130 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 SL A N E E + IN+ F V+ + + +E ++ VND E Sbjct: 131 SLDASNTE---EFIRINRPAPGLEFGRFVKELTAYTQTASSEIYLELFIVPGVNDSDESI 187 Query: 293 HQLAELLKDTPCKINLIPWNPFPGAP----YGRSSNSRIDRFSKVLM 335 + E+++ + + N S+ RF + L Sbjct: 188 RRFVEIVRGMKLVM--VQLNTLDRPGVVDWVRPSTPENTRRFIRALE 232 >UniRef50_A7I2S9 Radical SAM domain protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I2S9_CAMHC Length = 300 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 24/221 (10%) Query: 125 CALECKFCSTAQQGFNRNLR----VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE 180 C C +C +++ + V EI+ ++ + K +V N GE Sbjct: 30 CNFNCLYCELSKKRAISEMSEIAPVDEILNEIKKGLKEFNGVEVLTITA--N------GE 81 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLS-TSGVVPALDKLGDMIDVALAISLHAPND 239 P L E++ +S + + LS S + D L V SL A + Sbjct: 82 PTL-YPY---FSELINSIKKLNISPKLLILSNASKIAENFDDLLKFDIVK--FSLDAACE 135 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 EI +I KK I + + ++ +K G + IE +++ +ND + LA+ L Sbjct: 136 EIFKKI-DNPKKVQISKIIENIIKFRQK---FTGMLVIEILVVSDINDSEDEFKNLAKAL 191 Query: 300 KDTPC-KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGF 339 +D ++++ + P S R++ +++L Sbjct: 192 RDIKANRVDIGTIDRPPAFDCKAVSLERLNELAEILKKENI 232 >UniRef50_Q8TXS8 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyrus kandleri RepID=Q8TXS8_METKA Length = 282 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 48/262 (18%) Query: 112 DDRATLCVSSQVG--CALECKFCSTAQ----------QGFNRNLRVSEIIGQVWRAAKIV 159 + + V VG C + C+FC + R + E + R + Sbjct: 15 EHGKFVKVHLPVGGRCNIHCRFCESGLEHEGVRVDYPGRAVRTITGDEARTALKRVKEHC 74 Query: 160 GAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VP 217 G V G + G G+PL N +V +++ + + + + LST+GV Sbjct: 75 GRVDVVG--------IAGPGDPLANWEDVKETFDVVAE----TVPEAKRCLSTNGVWLPD 122 Query: 218 ALDKLGDMIDVALAISLHAPNDEIRDEIVPI-------------NKKYNIETFLAAVRRY 264 +D++ +++ ++ I+++A + EI +I ++ I Sbjct: 123 LIDEVTELVH-SVTITVNALDPEIAADIYDRALTPEGEVLTGKEAARW-IVERQEGAMDA 180 Query: 265 LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK-INLIPWNPFPGA-PYGRS 322 L+K +V V++ VN + ++AE D +N+IP P + Sbjct: 181 LKKERYILKKVNF--VLVPGVN--EDEVERVAERAADAGFHAMNVIPLIPGGDMKDHRPP 236 Query: 323 SNSRIDRFSKVLMSYGFTTIVR 344 + + R Y T + R Sbjct: 237 TCRELSRARDRAEKY-ITVMRR 257 >UniRef50_A5GBP2 Radical SAM domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBP2_GEOUR Length = 446 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 30/179 (16%) Query: 125 CALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 C L C CS T G E +++ + G+ ++ + MG GEP Sbjct: 141 CNLACSHCSRVTTESPG------PDE-----LNLEELISFLEQAGRIGVSTITFMG-GEP 188 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDV---ALAISLHAPN 238 + +E+ L G+ R +++ T+G + +KL + ++ +SLH N Sbjct: 189 TCHPE----LIELALVARLSGI--RSISVGTNGWLVD-EKLAARMAAVFDSIQVSLHGTN 241 Query: 239 DEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 I D IV ++ + E + ++R S RVTI Y + G E A +LA Sbjct: 242 AVIHDNIV--GRQGSFEQSIQSIRYLKAHSAR---RVTISYTVTHDNAAGMETAARLAR 295 >UniRef50_D1SBC6 Pyruvate formate-lyase activating enzyme n=2 Tax=Actinomycetales RepID=D1SBC6_9ACTO Length = 275 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 84/241 (34%), Gaps = 44/241 (18%) Query: 123 VGCALECKFCST-----AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMG 177 GC L C++C + + G R V E++ A + +V G V + G Sbjct: 58 AGCPLRCRYCHSPDTWYGRSGRRR--TVDEMVT---LATRYRRFIQVAGG----GVTVSG 108 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VPALDKLGDMIDVALAISLH 235 GEPLL + DD G L TSG V A D L D D+ L + + Sbjct: 109 -GEPLLQPAFTRELLRRCHDDLGL-----HTALDTSGFLGVRADDALLDATDLVL-LDVK 161 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQL 295 A N + + + LA R+ ++ + I YV++ + D + ++ Sbjct: 162 AGNPQTYRRVTGTGR-------LAPTLRFAQRLADRGTPIWIRYVLVPGLTDAVDEVERV 214 Query: 296 AELLKDTPC--KINLIPWNPFPGAPY------------GRSSNSRIDRFSKVLMSYGFTT 341 A++ ++ ++P++ Y + R + G T Sbjct: 215 ADVAAGLATVQRVEVLPFHRLGAHKYAELGLTFPLADTEPPDAGLLTRVRGQFAARGLTV 274 Query: 342 I 342 Sbjct: 275 T 275 >UniRef50_A4J0I5 Pyruvate formate-lyase activating enzyme n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0I5_DESRM Length = 229 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 32/203 (15%) Query: 118 CVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 CV GC L C++C T + + EI+ +V R + Sbjct: 21 CVVFFQGCLLRCRYCHNPDTWDLLGGQEMDSDEIVKKVRRFKSYFHNNGG--------IT 72 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVA--LAI 232 + G GEPLL + A I+ G+ + TSG + + L ++ L + Sbjct: 73 LSG-GEPLLQPD---FAFAILQQCKKEGI---HTAVDTSGCID-VGALEKILPFTDLLLL 124 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 + A +D + + K Y+ + + + YV+L +ND E+ Sbjct: 125 DVKAVDDSLYHWL--TGGK---AETFQMAVDYI---RQQKTPLWLRYVVLPGMNDSPEYR 176 Query: 293 HQLAELLKDTP---CKINLIPWN 312 ++L +L+ K+ L+P++ Sbjct: 177 YRLEKLINSLGDQVKKVELLPYH 199 >UniRef50_A0LJ51 Radical SAM domain protein n=4 Tax=Deltaproteobacteria RepID=A0LJ51_SYNFM Length = 443 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 20/204 (9%) Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN 172 +R + + C C C + Q + I V +I G A ++ Sbjct: 185 ERWEAPLPTSPVCNARCLGCISLQDRKDLRATQDRITF-VPTPEEICGVAVPHLEQAPRP 243 Query: 173 VVMMGMG---EPLLNLNNVVPAMEIMLDDFGFGLSKRR-VTLSTSGVVP-ALDKLGDMID 227 VV G G EPLL + + A+ +M + R + L+T+G +P + +L Sbjct: 244 VVSFGQGCEGEPLLQADTLAEAIRMMR-----AATPRGTINLNTNGSLPHMIPELCAAGL 298 Query: 228 VALAISLHAPNDEI-RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVN 286 ++ ISL++ P ++ VR+ + + + V+I Y +L + Sbjct: 299 DSIRISLNSARPAYYHAYFNPQGYRF------DDVRQSILAAKSAGRFVSINYFILPGFS 352 Query: 287 DGTEHAHQLAELLKDTPCKINLIP 310 D + L L+++T +I+LI Sbjct: 353 DQPDELDALCRLIEET--RIDLIQ 374 >UniRef50_Q7MSJ9 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSJ9_WOLSU Length = 303 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 82/241 (34%), Gaps = 48/241 (19%) Query: 125 CALECKFC------STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 C +C +C +T G V EI+ ++ + + K N Sbjct: 29 CNFDCLYCELEGKKATDSMGEVAK--VEEILEEL---REALPRYKPDVITVTAN------ 77 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTL-----STSGVVPALDKLGDMIDVALAIS 233 GEP L ++P + + L TL S G + L + V S Sbjct: 78 GEPTL-YPALLPLIRGIN-----ALPHSAKTLILSNGSRFGEPEVQEALLEFDMVK--FS 129 Query: 234 LHAPN-------DEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVN 286 L A + D D + +I + ++ + + +G + E + + VN Sbjct: 130 LDAVSARAFKRVDRAHDSL-------SISQIIQGIKGF---RSRYRGDLIAEVLFVKGVN 179 Query: 287 DGTEHAHQLAELLKDT-PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRK 345 D E A +A +LK+ P +++L + P S +++ + R+ Sbjct: 180 DSPEEARAIARVLKEIAPSRVDLSTIDRPPAYKVEGVSPQKLEELASAFEGLNLFIAKRQ 239 Query: 346 T 346 + Sbjct: 240 S 240 >UniRef50_B1I6P5 Radical SAM domain protein n=2 Tax=Clostridiales RepID=B1I6P5_DESAP Length = 456 Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 22/174 (12%) Query: 117 LCVSSQVGCALECKFCST--AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 LC+ C L C++C + R L V R A + ++ +R + + Sbjct: 90 LCLYVSHHCNLACRYCFARAGRPDTVRKLMP----SGVARRAVDLLISESGARRHVE-ID 144 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKR-RVTLSTSGVV--PALDKLGDMIDVALA 231 G GEPLLN V + + G KR T++T+G++ P + + V + Sbjct: 145 FFG-GEPLLNFPVVRDTIRYAR-ERGEAAGKRVGFTVTTNGLLLTPEVRRFLLKNKVNVV 202 Query: 232 ISLHAPNDEIRDEIVPINKKYN-----IETFLAAVRRYLEKSNANQGRVTIEYV 280 +SL E D ++ L +R Y+ + A +G YV Sbjct: 203 LSL-DGRPEAHDRW----RRTPGGGGSHREVLPKIREYVREWEACRGSRGYYYV 251 >UniRef50_P0A9N6 Pyruvate formate-lyase 1-activating enzyme n=287 Tax=Bacteria RepID=PFLA_ECO57 Length = 246 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 88/239 (36%), Gaps = 44/239 (18%) Query: 124 GCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE 180 GC + C +C T + + V +++ +V + A+ V GE Sbjct: 29 GCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGG--------VTASGGE 80 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV----PALDKLGDMIDVALAISLHA 236 +L V + G+ L T+G V P +D+L ++ D+ + + L Sbjct: 81 AILQAEFVRDWFRACKKE---GI---HTCLDTNGFVRRYDPVIDELLEVTDL-VMLDLKQ 133 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 NDEI +V ++ +E + + +V I YV++ +D + AH+L Sbjct: 134 MNDEIHQNLVGVSNHRTLE--------FAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLG 185 Query: 297 ELLKDTPC--KINLIPWNPFPGAPY------------GRSSNSRIDRFSKVLMSYGFTT 341 E +D KI L+P++ + ++R +L YG Sbjct: 186 EFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKV 244 >UniRef50_A5N1T7 NifK/nifB n=3 Tax=Clostridium RepID=A5N1T7_CLOK5 Length = 890 Score = 51.8 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 92/230 (40%), Gaps = 36/230 (15%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ--RPITNVVMMGMGEPL 182 C + C +C + + R + V + + K+ +T + + G G+ L Sbjct: 497 CNISCNYC-SRKYDCANESRPG-VTSGVLTPEEALEKFKLVKGKIENLTVIGIAGPGDAL 554 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVT--LSTSGVVPALD--KLGDMIDVALAISLHAPN 238 N V ++E++ + ++T LST+G++ +L ++ + ++++A + Sbjct: 555 ANFPKVKKSLELIRKEDP------KITFCLSTNGLMLPFYANQLIELGVSHVTVTINAVD 608 Query: 239 DEIRDEIVP----INKKYNIETF--------LAAVRRYLEKSNANQGRVTIEYVMLDHVN 286 ++I I + KY E L+ + K + + VML +N Sbjct: 609 EKIGALIYKEVNYLEHKYKGEEGARILLNNQLSGLEYLCSKGVVCKVNI----VMLKGIN 664 Query: 287 DGTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPYGR---SSNSRIDRFSK 332 D H ++ + +KD + N++ P G+ + SN+ ++ K Sbjct: 665 DS--HIKEVVKKVKDCGAYMTNIMQMIPVQGSGFEHLPLVSNAELNEMRK 712 >UniRef50_C0BY63 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BY63_9CLOT Length = 226 Score = 51.4 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 72/197 (36%), Gaps = 36/197 (18%) Query: 124 GCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE 180 GC L C +C T + E+ G++ R + G +T GE Sbjct: 17 GCPLRCAYCHNPDTWKFEAGEEFSPQEVAGKIRRYRPYL----TNGGVTVTG------GE 66 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI----DVALAISLHA 236 PL+ I+ + GF L TSG+ +L + + D+ LA Sbjct: 67 PLMQPEFTAELFRIL-KEEGF-----HTALDTSGI--GNLQLAERVLAYTDLVLADVKFL 118 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 +E R +Y F +L+ + + I V++ +ND EH +L Sbjct: 119 TEEEYR--------RYCRADFREVT-AFLDLTKKLGIPLWIRRVLVPGINDTEEHIKKLV 169 Query: 297 ELLKDTPC--KINLIPW 311 + L P KI L+P+ Sbjct: 170 DFLTKYPNVEKIELLPF 186 >UniRef50_A7HLP5 Radical SAM domain protein n=9 Tax=Thermotogaceae RepID=A7HLP5_FERNB Length = 600 Score = 51.0 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 44/223 (19%) Query: 104 VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF-NRNLRVSEIIGQVWRAAKIVGAA 162 VE+V DRA + +S GC C+FC R EI+ V + + G Sbjct: 251 VESV----HDRAVIEISR--GCTRGCRFCHAGYVYRPVRERSADEIVKSVKKLIENTGYD 304 Query: 163 KVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLST-SGVVPAL-- 219 +V+ + L+ + + E ++++ L ++V++S S V A Sbjct: 305 EVSLLSLSS-----------LDHSQISEIAEKLVEE----LKDKKVSISIPSTRVDAFNI 349 Query: 220 ---DKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 +K+ ++ L + A + ++RD I NK+ + + + E A R+ Sbjct: 350 KIGEKIAEVRKTGLTFAPEAGSQKMRDAI---NKQISYDDIINTA---SEAKRAGWRRIK 403 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTP--------CKIN-LIP 310 + Y M+ + E ++ EL+KD +N LIP Sbjct: 404 L-YFMVGFPEETEEDIKEIGELIKDIKKLGFSDITASVNLLIP 445 >UniRef50_Q3ADK0 Radical SAM domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADK0_CARHZ Length = 198 Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 34/214 (15%) Query: 109 IPEDDRATLCVSSQVGCALECKFCSTAQQG-------FNRNLRVSEIIGQVWRAAKIVGA 161 I + +L ++ C C FC + +R EII A + Sbjct: 4 IAYELGNSLYINLTNRCTNACVFCIRKTEKGVGYDLWLDREPDTGEII------AALKEK 57 Query: 162 AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA--- 218 + + VV G GEPLL + VV + + + ++V ++T+G+ Sbjct: 58 DPLKYEE----VVFCGYGEPLLRIKEVVEVARWLKE-----IGVKKVRINTNGLANRYHG 108 Query: 219 ---LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRV 275 L +L ++DV ++ISL+A + E ++ +Y E + ++ ++E+S V Sbjct: 109 RNILPELKGLVDV-ISISLNAQDAEAYQKV--SRSRYGQEAYAEVLK-FIEESKKYIPEV 164 Query: 276 TIEYVMLDHVN--DGTEHAHQLAELLKDTPCKIN 307 + V + V+ + + A +L L+ N Sbjct: 165 VVTVVRWEGVDVEETKKVAERLGVKLRVREFYGN 198 >UniRef50_C5K4P5 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K4P5_9ALVE Length = 117 Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 5/97 (5%) Query: 11 VTTKDGKINLLDL-----NRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINK 65 T+ + +L L + + F ++G A + K + + ++ I+K Sbjct: 3 EATRSRRRDLCSLRKPLLDTPALEAFLVEVGSSRQHASTIQKALLTDIHFDPSRLSGISK 62 Query: 66 VLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ 102 L E + V +Q SSDGT K I + Sbjct: 63 KAASLLDEAFMRCSTSVTMKQVSSDGTTKMLITLQVG 99 >UniRef50_Q64CF5 Fe-S oxidoreductase n=2 Tax=environmental samples RepID=Q64CF5_9ARCH Length = 329 Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 78/231 (33%), Gaps = 36/231 (15%) Query: 125 CALECKFCSTAQQGFNRNLR-----VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 C C +C + N R E++ ++ R + R I V +G G Sbjct: 30 CNYSCVYCQLGRTTHMTNQRKDFFPPEELLNEIKRVE------VESSHREIDFVTFVGEG 83 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV---PALDKLGDMIDVALAISLHA 236 EP L ++ ++ ++ + + T+G + + D+ + SL A Sbjct: 84 EPTL-----CKSLGWLI-RKTKEIADIPIAVDTNGSLLYREDVRNDLSQADI-VMPSLDA 136 Query: 237 PNDEIRDEIVPINKKYN---IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 E +I N+ Y ET + + R+ N G + +E +++ +ND Sbjct: 137 GTAETFRKI---NRPYRGLDFETVVEGLERFRRDYN---GEIWVEVMLVKGLNDSAGELE 190 Query: 294 QLAELLKDT---PCKINLIPWNPFPGAPYG-RSSNSRIDRFSKVLMSYGFT 340 L L IN+ P P P P+ I +L Sbjct: 191 ALKSRLGKIEPNRTYINV-PIRP-PAEPWAVPPDKEAITLAHAILNDANVV 239 >UniRef50_B3EE07 Radical SAM domain protein n=10 Tax=Chlorobiaceae RepID=B3EE07_CHLL2 Length = 321 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 88/226 (38%), Gaps = 38/226 (16%) Query: 125 CALECKFCSTAQQG-----FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 C C +C + EI+ ++ + I + +G G Sbjct: 38 CTWNCVYCQIGRTKHYVTERCEFYPPEEILKEI--------RDALQAGTHIDWITFVGSG 89 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVT-LSTSGVVPALDKLGDMIDVAL----AI-- 232 E LL + ++++ +++T + + + + + L A+ Sbjct: 90 ETLL-----YKDIGYLIEEV------KKMTAIPVAVITNGSLFHLEEVRRELLHADAVLP 138 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 SL+A ++E+ + I + + L + ++ ++ +G++ +E ++L+ +ND E Sbjct: 139 SLNAGSEELYERIDRPASGFTFKQHLDGLIQFRQEY---KGKLWVEVMLLNGLNDSDEAL 195 Query: 293 HQLA---ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLM 335 ++LA +L+ + ++P P P N RIDR +L Sbjct: 196 NELAAAMKLVAPDMVHL-VLPTRPAPEQQVVLPDNERIDRAVVILS 240 >UniRef50_A3ZZE4 Putative uncharacterized protein n=2 Tax=Planctomycetaceae RepID=A3ZZE4_9PLAN Length = 228 Score = 49.9 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 27/112 (24%) Query: 109 IPEDDRATLCVSSQV---GCALECKFCSTAQQGFN---RNLRVSEIIGQVWRAAKIVGAA 162 I + T S+ V GC L C FC T + +L V+EI+G++ Sbjct: 10 IQGEGALTGVTSTFVRASGCNLRCWFCDTPHASWKPEGEDLSVAEILGRIALL------- 62 Query: 163 KVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG 214 +VV+ G GEP+L E++ G ++ R +T+ T+G Sbjct: 63 ------DCDHVVLTG-GEPML-------FAEMIPLCEGIHVAGRHITIETAG 100 >UniRef50_Q979T0 Probable molybdenum cofactor biosynthesis protein A n=4 Tax=Thermoplasmatales RepID=MOAA_THEVO Length = 326 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 28/190 (14%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C C FC + +EI G+ + +I K+ + + + + G GEP L Sbjct: 22 CNFNCFFCH---------MEGTEISGEALKPEEIERVVKIAHKFGVNKIKLTG-GEPTLR 71 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL--DKLGDMIDVALAISLHAPNDEIR 242 + ++I+ + ++++T+GV+ + +L + IS+HA +++ Sbjct: 72 RD----LIDIVKRIRKYITG--NISMTTNGVMLPILAYELKKAGLDRVNISMHAFDEDTF 125 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVN-DGTEHAHQLAELLKD 301 I +N + I + A A V I +V+L +N D +LA + Sbjct: 126 QAITGVNSRDRIIKAIDAANE------AGLTPVKINFVVLRDLNVDQIPDMIELAA---E 176 Query: 302 TPCKINLIPW 311 + LI + Sbjct: 177 KHAILQLIEY 186 >UniRef50_D2RJC4 Pyruvate formate-lyase activating enzyme n=2 Tax=Bacteria RepID=D2RJC4_ACIFE Length = 243 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 83/261 (31%), Gaps = 51/261 (19%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNL-RVSEIIGQVWRAAK 157 +ET + + Q GC + C +C T + G L E++ Q A + Sbjct: 7 HSIETFGSVDGPGTRFIIFVQ-GCHMRCLYCHNVDTWKCGQGGQLKTADELLDQ---AER 62 Query: 158 IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV- 216 G ++ GEPLL + + +++ G+ + T+G Sbjct: 63 YRPYWGPEGGITVSG------GEPLLQMEFL---LDLFRKAKARGIGT---CIDTAGQPF 110 Query: 217 -------PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSN 269 +L ++ D+ L H + E ++ + L R + Sbjct: 111 TRKEPFFSQFQQLMEVTDILLVDVKH-IDPEAHKKL----TGQPNDNILDLFRYLSD--- 162 Query: 270 ANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWN------------PFP 315 ++ + + V++ D + + L ++ ++P++ P Sbjct: 163 -SKKPIWVRQVLVPGWTDDPASLKRTRQFLDTLANIQRVEVLPYHNMGLYKWEELGIPNQ 221 Query: 316 GAPYGRSSNSRIDRFSKVLMS 336 + +D+ +L + Sbjct: 222 LKDVKPPTREEVDKARAILRA 242 >UniRef50_C7N5R9 KamA family protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5R9_SLAHD Length = 407 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 108/328 (32%), Gaps = 75/328 (22%) Query: 52 YCCDNFDEMTDINKVLRGKLKEVAEIRA----PEVVEEQRSSDGTIKWAIA--------- 98 +F +++D + + ++E + +V D + I Sbjct: 24 QQLRDFLQLSDADSTMLESIQENYPLLVNPYYLSLVNPNDPDDPVRRMCIPAAEELDFSG 83 Query: 99 VGDQRVE---TVY--IPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNL---RVSEIIG 150 + D E TV + T V S CA+ C+ C F R L E + Sbjct: 84 LADTSGESKSTVLPGLQHKYAETALVLSTNQCAMYCRHC------FRRRLVGRDADETVR 137 Query: 151 QVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV----PAMEIMLDDFGFGLSKR 206 + A + ITNV++ G G+ L+N N + A+ + L R Sbjct: 138 NIDAVADYIRD-----HEEITNVLISG-GDALMNSNETLFRYLEALAPIPHLKTIRLGTR 191 Query: 207 -------RVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIR-DEIVPINKKYNIETFL 258 R+T P L L + + LH +EI P ++ Sbjct: 192 IPVVLPQRIT-----DDPGLIDL--LSGFNHIVQLHVVTQFNHPNEITPESR-------- 236 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 A+R LE + + V+L VND E LA L+ D I ++P+ Sbjct: 237 DAIRILLELGIPVRNQT----VLLKGVNDTPE---TLARLMDDL-VGIGIVPY-----YV 283 Query: 319 YG-RSSNSRIDRFS-KVLMSYGFTTIVR 344 + R + +RF +L R Sbjct: 284 FQCRPTVGVKNRFQVPILTGCNIVAQAR 311 >UniRef50_A9A0E2 Radical SAM domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0E2_DESOH Length = 313 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 83/231 (35%), Gaps = 42/231 (18%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQV-WRAAKIVGAAKVTGQRPITN---VVMMGMGE 180 C +C +C + S+ + ++ +R A V A I + + G GE Sbjct: 34 CTYDCIYCQLGK-------SSSKTVKRLPYRDADTVLAQLFERLEKIDRPDCITIAGSGE 86 Query: 181 PLLNLN--NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVA---LAI--- 232 P LN + V+ ++ D V + T+G L +V LA Sbjct: 87 PTLNSDIGAVIAGIKQKTDI--------PVVVLTNG------SLLSDPEVQSDLLAADMV 132 Query: 233 --SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 SL A N E+ I N+ Y F + S A G++ +E ++D +N + Sbjct: 133 IPSLDAWNPEMFASI---NRPYRTVDFTTMTEGLVSFSKAYGGQLWLEIFIMDGINASVD 189 Query: 291 HAHQ---LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYG 338 A L + + +N P + ++S + I+ F + L Sbjct: 190 DARAFKPLVDRINPAVVYVN-TAVRPPEESFVKQASPAMIENFYRTLGRAH 239 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q6FEM6 Ribosomal RNA large subunit methyltransferase N ... 446 e-124 UniRef50_B7H072 Ribosomal RNA large subunit methyltransferase N ... 444 e-123 UniRef50_B8CWT1 Radical SAM enzyme, Cfr family n=2 Tax=Firmicute... 437 e-121 UniRef50_B2U9U6 Ribosomal RNA large subunit methyltransferase N ... 435 e-121 UniRef50_Q5LY98 Ribosomal RNA large subunit methyltransferase N ... 435 e-120 UniRef50_A4SYE2 Ribosomal RNA large subunit methyltransferase N ... 434 e-120 UniRef50_Q3BTW5 Ribosomal RNA large subunit methyltransferase N ... 428 e-118 UniRef50_Q5P7B0 Ribosomal RNA large subunit methyltransferase N ... 428 e-118 UniRef50_Q8D1Y5 Ribosomal RNA large subunit methyltransferase N ... 427 e-118 UniRef50_Q2N9J2 Ribosomal RNA large subunit methyltransferase N ... 425 e-117 UniRef50_Q1D6I6 Ribosomal RNA large subunit methyltransferase N ... 425 e-117 UniRef50_Q2W897 Ribosomal RNA large subunit methyltransferase N ... 424 e-117 UniRef50_Q6ALW1 Ribosomal RNA large subunit methyltransferase N ... 422 e-117 UniRef50_Q2LUM5 Ribosomal RNA large subunit methyltransferase N ... 422 e-117 UniRef50_C0GIQ5 Radical SAM enzyme, Cfr family n=1 Tax=Dethiobac... 422 e-116 UniRef50_Q3SNT2 Ribosomal RNA large subunit methyltransferase N ... 420 e-116 UniRef50_B9KXX2 Radical SAM enzyme, Cfr family n=2 Tax=Thermomic... 419 e-116 UniRef50_C4Z523 Ribosomal RNA large subunit methyltransferase N ... 419 e-115 UniRef50_D1Y601 23S rRNA m2A2503 methyltransferase n=1 Tax=Pyram... 419 e-115 UniRef50_D1PM67 Radical SAM enzyme, Cfr family n=1 Tax=Subdoligr... 417 e-115 UniRef50_D0LIH5 Radical SAM enzyme, Cfr family n=2 Tax=Nannocyst... 417 e-115 UniRef50_C5EIZ2 Radical SAM enzyme n=11 Tax=Clostridiales RepID=... 417 e-115 UniRef50_A1VAL8 Ribosomal RNA large subunit methyltransferase N ... 417 e-115 UniRef50_Q3A2Z4 Ribosomal RNA large subunit methyltransferase N ... 416 e-115 UniRef50_Q54J76 Putative uncharacterized protein n=1 Tax=Dictyos... 416 e-115 UniRef50_A3DCX9 Ribosomal RNA large subunit methyltransferase N ... 416 e-115 UniRef50_B0UQR1 Ribosomal RNA large subunit methyltransferase N ... 416 e-115 UniRef50_D1CBZ4 Radical SAM enzyme, Cfr family n=1 Tax=Thermobac... 416 e-115 UniRef50_B8HRU7 Radical SAM enzyme, Cfr family n=2 Tax=Chroococc... 415 e-114 UniRef50_Q7UHU7 Ribosomal RNA large subunit methyltransferase N ... 415 e-114 UniRef50_B6BF31 Radical SAM enzyme, Cfr family n=1 Tax=Rhodobact... 415 e-114 UniRef50_B5YF42 Ribosomal RNA large subunit methyltransferase N ... 414 e-114 UniRef50_B8DRU2 Ribosomal RNA large subunit methyltransferase N ... 413 e-114 UniRef50_A9KM95 Ribosomal RNA large subunit methyltransferase N ... 412 e-113 UniRef50_A5CX33 Ribosomal RNA large subunit methyltransferase N ... 410 e-113 UniRef50_A9WFY6 Ribosomal RNA large subunit methyltransferase N ... 410 e-113 UniRef50_C1TNK6 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=De... 409 e-113 UniRef50_A6TRW3 Ribosomal RNA large subunit methyltransferase N ... 409 e-112 UniRef50_A4ECT0 Putative uncharacterized protein n=3 Tax=Collins... 408 e-112 UniRef50_B5EJF0 Radical SAM enzyme, Cfr family n=2 Tax=Acidithio... 408 e-112 UniRef50_Q2RK16 Ribosomal RNA large subunit methyltransferase N ... 407 e-112 UniRef50_A7HNQ1 Ribosomal RNA large subunit methyltransferase N ... 405 e-111 UniRef50_C5CGV5 Radical SAM enzyme, Cfr family n=1 Tax=Kosmotoga... 405 e-111 UniRef50_C9M5U8 Radical SAM enzyme, Cfr family n=1 Tax=Jonquetel... 405 e-111 UniRef50_Q1DCU1 Ribosomal RNA large subunit methyltransferase N ... 405 e-111 UniRef50_C9KJ31 Radical SAM enzyme, Cfr family n=1 Tax=Mitsuokel... 405 e-111 UniRef50_A8ZV25 Ribosomal RNA large subunit methyltransferase N ... 405 e-111 UniRef50_B0TGT1 Ribosomal RNA large subunit methyltransferase N ... 403 e-111 UniRef50_Q6MDD0 Ribosomal RNA large subunit methyltransferase N ... 403 e-111 UniRef50_Q1Q215 Putative uncharacterized protein n=1 Tax=Candida... 403 e-111 UniRef50_D2RNU4 Radical SAM enzyme, Cfr family n=1 Tax=Acidamino... 403 e-111 UniRef50_Q3AC22 Ribosomal RNA large subunit methyltransferase N ... 402 e-110 UniRef50_B9E1E5 Putative uncharacterized protein n=2 Tax=Clostri... 401 e-110 UniRef50_C0WD85 Ribosomal RNA large subunit methyltransferase N ... 400 e-110 UniRef50_A5UT23 Ribosomal RNA large subunit methyltransferase N ... 400 e-110 UniRef50_A4XL78 Ribosomal RNA large subunit methyltransferase N ... 400 e-110 UniRef50_Q72HC1 Ribosomal RNA large subunit methyltransferase N ... 400 e-110 UniRef50_A5D1B6 Ribosomal RNA large subunit methyltransferase N ... 399 e-110 UniRef50_B2A2K6 Ribosomal RNA large subunit methyltransferase N ... 399 e-110 UniRef50_C7NA88 Radical SAM enzyme, Cfr family n=5 Tax=Fusobacte... 399 e-110 UniRef50_Q2S0P9 Ribosomal RNA large subunit methyltransferase N ... 399 e-109 UniRef50_C1A949 Ribosomal RNA large subunit methyltransferase N ... 399 e-109 UniRef50_B9XSY7 Radical SAM enzyme, Cfr family n=1 Tax=bacterium... 398 e-109 UniRef50_Q0AXL8 Ribosomal RNA large subunit methyltransferase N ... 398 e-109 UniRef50_Q7X370 Putative uncharacterized protein n=2 Tax=uncultu... 397 e-109 UniRef50_D2R822 Radical SAM enzyme, Cfr family n=1 Tax=Pirellula... 397 e-109 UniRef50_Q6MPV7 Ribosomal RNA large subunit methyltransferase N ... 397 e-109 UniRef50_A7ZGB0 Ribosomal RNA large subunit methyltransferase N ... 397 e-109 UniRef50_B2A0B9 Ribosomal RNA large subunit methyltransferase N ... 396 e-109 UniRef50_C6I0U3 Radical SAM family protein n=3 Tax=Leptospirillu... 396 e-109 UniRef50_A8DJI2 Radical SAM enzyme Cfr family protein n=1 Tax=Ca... 395 e-108 UniRef50_C8WPW3 Radical SAM enzyme, Cfr family n=3 Tax=Coriobact... 394 e-108 UniRef50_B5YHG3 Radical SAM enzyme, Cfr family n=1 Tax=Thermodes... 394 e-108 UniRef50_B8FS78 Ribosomal RNA large subunit methyltransferase N ... 393 e-108 UniRef50_Q11QF0 Ribosomal RNA large subunit methyltransferase N ... 392 e-107 UniRef50_C8W8J4 Radical SAM enzyme, Cfr family n=3 Tax=Coriobact... 390 e-107 UniRef50_Q2JMN2 Ribosomal RNA large subunit methyltransferase N ... 390 e-107 UniRef50_B9CLR1 Radical SAM enzyme, Cfr family n=1 Tax=Atopobium... 389 e-107 UniRef50_D1B0V3 Radical SAM enzyme, Cfr family n=10 Tax=Campylob... 387 e-106 UniRef50_C7RGU3 Radical SAM enzyme, Cfr family n=5 Tax=Anaerococ... 387 e-106 UniRef50_B2J6D0 Ribosomal RNA large subunit methyltransferase N ... 387 e-106 UniRef50_D0RN88 Radical SAM enzyme, Cfr family n=1 Tax=alpha pro... 387 e-106 UniRef50_Q2J713 Ribosomal RNA large subunit methyltransferase N ... 386 e-106 UniRef50_C0BG68 Radical SAM enzyme, Cfr family n=1 Tax=Flavobact... 386 e-106 UniRef50_O80746 T13D8.12 protein n=9 Tax=Spermatophyta RepID=O80... 386 e-106 UniRef50_A9A3L9 Ribosomal RNA large subunit methyltransferase N ... 385 e-105 UniRef50_D1B6H8 Radical SAM enzyme, Cfr family n=1 Tax=Thermanae... 384 e-105 UniRef50_B3QS43 Ribosomal RNA large subunit methyltransferase N ... 383 e-105 UniRef50_A4SEQ5 Ribosomal RNA large subunit methyltransferase N ... 383 e-105 UniRef50_O66732 Ribosomal RNA large subunit methyltransferase N ... 382 e-104 UniRef50_Q8RFZ9 Ribosomal RNA large subunit methyltransferase N ... 380 e-104 UniRef50_C9LG49 Radical SAM enzyme, Cfr family n=16 Tax=Bacteria... 380 e-104 UniRef50_D1BMC5 Radical SAM enzyme, Cfr family n=3 Tax=Veillonel... 379 e-104 UniRef50_UPI00016C54F2 hypothetical protein GobsU_25056 n=1 Tax=... 378 e-103 UniRef50_B2RMI0 Ribosomal RNA large subunit methyltransferase N ... 378 e-103 UniRef50_Q0F2U6 Putative uncharacterized protein n=1 Tax=Maripro... 377 e-103 UniRef50_C1EEM6 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 375 e-102 UniRef50_C9LLK4 Radical SAM enzyme, Cfr family n=1 Tax=Dialister... 373 e-102 UniRef50_Q3ASD4 Ribosomal RNA large subunit methyltransferase N ... 373 e-102 UniRef50_Q01QF9 Ribosomal RNA large subunit methyltransferase N ... 373 e-102 UniRef50_A8SLZ1 Putative uncharacterized protein n=1 Tax=Parvimo... 372 e-102 UniRef50_B1ZVM5 Ribosomal RNA large subunit methyltransferase N ... 372 e-101 UniRef50_A9S1C9 Predicted protein n=1 Tax=Physcomitrella patens ... 372 e-101 UniRef50_UPI000050FC81 radical SAM enzyme, Cfr family protein n=... 371 e-101 UniRef50_C1SKY4 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=De... 371 e-101 UniRef50_Q0F1H4 Radical SAM superfamily protein n=1 Tax=Mariprof... 369 e-101 UniRef50_B9HMI5 Predicted protein n=1 Tax=Populus trichocarpa Re... 369 e-101 UniRef50_C0QZJ2 Predicted Fe-S-cluster redox enzyme n=2 Tax=Brac... 368 e-100 UniRef50_C9RKM0 Radical SAM enzyme, Cfr family n=1 Tax=Fibrobact... 367 e-100 UniRef50_A0LV48 Ribosomal RNA large subunit methyltransferase N ... 366 e-100 UniRef50_A9FFJ6 Ribosomal RNA large subunit methyltransferase N ... 366 e-100 UniRef50_UPI0001C31CDE radical SAM enzyme, Cfr family n=1 Tax=Co... 364 4e-99 UniRef50_B0S143 Ribosomal RNA large subunit methyltransferase N ... 363 5e-99 UniRef50_B7FZP4 Predicted protein (Fragment) n=2 Tax=Bacillariop... 360 5e-98 UniRef50_B0MQA1 Putative uncharacterized protein n=1 Tax=Eubacte... 358 1e-97 UniRef50_C7NGZ4 Radical SAM enzyme, Cfr family n=1 Tax=Kytococcu... 356 8e-97 UniRef50_Q7V010 Ribosomal RNA large subunit methyltransferase N ... 356 9e-97 UniRef50_B0VIB4 Putative radical SAM-dependent enzyme (YfgB) n=1... 356 1e-96 UniRef50_D1VSE2 Radical SAM enzyme, Cfr family n=1 Tax=Peptoniph... 353 6e-96 UniRef50_C1F813 Radical SAM enzyme, Cfr family n=1 Tax=Acidobact... 353 7e-96 UniRef50_B1ZQZ5 Ribosomal RNA large subunit methyltransferase N ... 350 4e-95 UniRef50_Q1AYW0 Ribosomal RNA large subunit methyltransferase N ... 350 6e-95 UniRef50_B2KDX7 Radical SAM enzyme, Cfr family n=1 Tax=Elusimicr... 349 1e-94 UniRef50_A6DSV2 YloN n=1 Tax=Lentisphaera araneosa HTCC2155 RepI... 348 2e-94 UniRef50_C7M235 Radical SAM enzyme, Cfr family n=1 Tax=Acidimicr... 347 5e-94 UniRef50_D1R7C7 Putative uncharacterized protein n=1 Tax=Parachl... 346 7e-94 UniRef50_B3DX07 Radical SAM family enzyme n=1 Tax=Methylacidiphi... 345 1e-93 UniRef50_D1N5Y0 Radical SAM enzyme, Cfr family n=1 Tax=Victivall... 345 2e-93 UniRef50_B1H070 Ribosomal RNA large subunit methyltransferase N ... 344 3e-93 UniRef50_A8I3K8 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 344 4e-93 UniRef50_Q6MED6 Ribosomal RNA large subunit methyltransferase N ... 344 4e-93 UniRef50_A4RXU8 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 343 7e-93 UniRef50_C1E6J0 Predicted protein n=2 Tax=Micromonas RepID=C1E6J... 341 2e-92 UniRef50_C8PSX7 Radical SAM enzyme, Cfr family n=1 Tax=Treponema... 340 5e-92 UniRef50_A9V4C5 Predicted protein n=2 Tax=Fungi/Metazoa group Re... 338 2e-91 UniRef50_C0QD94 Putative uncharacterized protein n=1 Tax=Desulfo... 337 4e-91 UniRef50_B1C5S5 Putative uncharacterized protein n=1 Tax=Anaerof... 336 9e-91 UniRef50_A8I8N2 Predicted Fe-S-cluster redox enzyme n=1 Tax=Chla... 335 2e-90 UniRef50_C1EAY2 Predicted protein n=3 Tax=Eukaryota RepID=C1EAY2... 335 2e-90 UniRef50_C7GZA9 Radical SAM enzyme, Cfr family n=1 Tax=Eubacteri... 334 3e-90 UniRef50_B9EX01 Putative uncharacterized protein n=1 Tax=Oryza s... 333 6e-90 UniRef50_Q01GU0 Radical SAM domain-containing protein-like (ISS)... 332 1e-89 UniRef50_B2S216 Ribosomal RNA large subunit methyltransferase N ... 328 2e-88 UniRef50_A7GH77 Ribosomal RNA large subunit methyltransferase cf... 326 6e-88 UniRef50_Q9LJN3 Gb|AAF41683.1 n=13 Tax=Magnoliophyta RepID=Q9LJN... 323 8e-87 UniRef50_B0SGA8 Ribosomal RNA large subunit methyltransferase N ... 321 4e-86 UniRef50_Q5WJ42 Ribosomal RNA large subunit methyltransferase cf... 319 1e-85 UniRef50_A6DL87 Putative uncharacterized protein n=1 Tax=Lentisp... 315 2e-84 UniRef50_D2VS80 Predicted protein n=1 Tax=Naegleria gruberi RepI... 314 3e-84 UniRef50_B5JDK5 Radical SAM enzyme, Cfr family n=1 Tax=Verrucomi... 313 5e-84 UniRef50_B7S3M1 Predicted protein n=2 Tax=Phaeodactylum tricornu... 313 9e-84 UniRef50_A9FD89 Probable RNA methyltransferase sce1580 n=1 Tax=S... 310 5e-83 UniRef50_A4RV36 Predicted protein (Fragment) n=3 Tax=Viridiplant... 309 1e-82 UniRef50_Q7UPG1 Probable RNA methyltransferase RB6963 n=2 Tax=Pl... 304 2e-81 UniRef50_B4U5N7 Radical SAM enzyme, Cfr family n=1 Tax=Hydrogeno... 301 3e-80 UniRef50_C7GI13 Radical SAM enzyme, Cfr family n=15 Tax=Clostrid... 301 4e-80 UniRef50_C1E2Q2 Predicted protein (Fragment) n=1 Tax=Micromonas ... 300 6e-80 UniRef50_Q1CYE1 Probable RNA methyltransferase MXAN_6459 n=2 Tax... 299 8e-80 UniRef50_Q8IM25 Radical SAM protein, putative n=5 Tax=Aconoidasi... 299 1e-79 UniRef50_Q136A2 Probable RNA methyltransferase RPD_2859 n=1 Tax=... 298 2e-79 UniRef50_B6AEB0 Radical SAM domain-containing protein n=1 Tax=Cr... 293 6e-78 UniRef50_C1ZMH3 23S rRNA m(2)A-2503 methyltransferase n=3 Tax=Pl... 291 4e-77 UniRef50_Q5CQD5 Conserved protein with transmembrane region at C... 287 5e-76 UniRef50_Q2Z000 Putative uncharacterized protein n=1 Tax=uncultu... 286 7e-76 UniRef50_Q2IHD1 Probable RNA methyltransferase Adeh_4229 n=4 Tax... 281 2e-74 UniRef50_B7FTW5 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 279 9e-74 UniRef50_B5Y3J7 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 278 3e-73 UniRef50_B6KPF5 Radical SAM domain-containing protein n=4 Tax=To... 278 3e-73 UniRef50_A9EPV3 Probable RNA methyltransferase sce3898 n=1 Tax=S... 277 6e-73 UniRef50_A4S5T8 Predicted protein n=7 Tax=Viridiplantae RepID=A4... 277 6e-73 UniRef50_Q01C13 Homology to unknown gene n=1 Tax=Ostreococcus ta... 271 4e-71 UniRef50_B8ZNC2 Radical SAM superfamily protein n=7 Tax=Streptoc... 264 3e-69 UniRef50_B8LDJ4 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 259 1e-67 UniRef50_B6KND1 GPI transamidase 8, putative n=3 Tax=Toxoplasma ... 256 1e-66 UniRef50_Q3SHI2 Probable RNA methyltransferase Tbd_1951 n=22 Tax... 254 5e-66 UniRef50_B3LAU1 Radical SAM protein, putative n=4 Tax=Plasmodium... 246 8e-64 UniRef50_C6P0S6 Radical SAM domain protein n=1 Tax=Sideroxydans ... 244 4e-63 UniRef50_B8BRJ2 Predicted protein n=1 Tax=Thalassiosira pseudona... 239 2e-61 UniRef50_C5KHT4 Putative uncharacterized protein n=1 Tax=Perkins... 234 6e-60 UniRef50_A8J882 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 227 4e-58 UniRef50_UPI0001698B51 radical SAM enzyme, Cfr family protein n=... 224 6e-57 UniRef50_Q3EPJ3 Radical SAM family enzyme n=1 Tax=Bacillus thuri... 221 4e-56 UniRef50_B1AIK2 Putative uncharacterized protein n=15 Tax=Ureapl... 219 1e-55 UniRef50_D0MX90 Ribosomal RNA large subunit methyltransferase N,... 210 8e-53 UniRef50_C0QTQ8 Radical SAM enzyme, Cfr family n=4 Tax=Aquifical... 207 5e-52 UniRef50_C1DT21 Radical SAM enzyme, Cfr family n=3 Tax=Sulfurihy... 200 7e-50 UniRef50_UPI00006DCC08 hypothetical protein CdifQ_04003012 n=1 T... 197 4e-49 UniRef50_Q4HQT8 Radical SAM enzyme, Cfr family n=1 Tax=Campyloba... 186 1e-45 UniRef50_C5K4P4 Putative uncharacterized protein n=2 Tax=Perkins... 182 2e-44 UniRef50_C1SGI6 Predicted Fe-S-cluster redox enzyme n=1 Tax=Deni... 176 2e-42 UniRef50_A6GDS6 Putative uncharacterized protein n=1 Tax=Plesioc... 170 9e-41 UniRef50_B8CKQ7 Putative uncharacterized protein n=1 Tax=Shewane... 154 8e-36 UniRef50_A7AF87 Putative uncharacterized protein n=1 Tax=Parabac... 148 4e-34 UniRef50_Q5UP06 Uncharacterized protein R756 n=1 Tax=Acanthamoeb... 147 9e-34 UniRef50_B3FJU2 Putative uncharacterized protein n=1 Tax=Pseudom... 136 1e-30 UniRef50_A7HKB3 Radical SAM domain protein n=12 Tax=cellular org... 135 3e-30 UniRef50_P0A9N6 Pyruvate formate-lyase 1-activating enzyme n=287... 129 1e-28 UniRef50_UPI0001698B52 radical SAM enzyme, Cfr family protein n=... 129 1e-28 UniRef50_UPI00016C3CF8 hypothetical protein GobsU_10628 n=1 Tax=... 129 2e-28 UniRef50_Q080J6 Pyruvate formate-lyase activating enzyme n=12 Ta... 129 2e-28 UniRef50_B9PC33 Predicted protein (Fragment) n=1 Tax=Populus tri... 119 2e-25 UniRef50_C7RH90 Fe-S-cluster redox enzyme-like protein n=1 Tax=A... 119 2e-25 UniRef50_D1SBC6 Pyruvate formate-lyase activating enzyme n=2 Tax... 112 2e-23 UniRef50_C1FL59 Glycyl-radical enzyme activating family protein ... 112 3e-23 UniRef50_A7ZEI0 Nitrogenase cofactor biosynthesis protein NifB n... 112 3e-23 UniRef50_O27899 Nitrogenase iron-molybdenum cofactor biosynthesi... 110 1e-22 UniRef50_B6YRJ3 Nitrogenase molybdenum-cofactor biosynthesis pro... 108 4e-22 UniRef50_D2RJC4 Pyruvate formate-lyase activating enzyme n=2 Tax... 107 6e-22 UniRef50_B8DR83 Nitrogenase cofactor biosynthesis protein NifB n... 107 8e-22 UniRef50_Q9V177 MooA-like molybdenum cofactor biosynthesis prote... 107 9e-22 UniRef50_A4J0I5 Pyruvate formate-lyase activating enzyme n=1 Tax... 106 1e-21 UniRef50_C2BHE9 [formate-C-acetyltransferase]-activating enzyme ... 106 1e-21 UniRef50_D0MX91 Putative uncharacterized protein n=1 Tax=Phytoph... 105 2e-21 UniRef50_Q58493 Uncharacterized protein MJ1093 n=16 Tax=Euryarch... 105 4e-21 UniRef50_C0QGR9 PflC1 n=1 Tax=Desulfobacterium autotrophicum HRM... 105 4e-21 UniRef50_C3WY92 Fe-S oxidoreductase n=12 Tax=Fusobacterium RepID... 103 8e-21 UniRef50_C5TMX1 Pyruvate formate-lyase 1-activating enzyme n=4 T... 103 9e-21 UniRef50_A5G750 Radical SAM domain protein n=8 Tax=cellular orga... 101 3e-20 UniRef50_Q8TXS8 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyr... 100 8e-20 UniRef50_Q97JT3 Predicted Fe-S-cluster redox enzyme, YLON B.subt... 100 9e-20 UniRef50_C5A4P1 Radical SAM protein, elongator protein 3/MiaB/Ni... 100 1e-19 UniRef50_O67929 Molybdenum cofactor biosynthesis protein A n=2 T... 99 2e-19 UniRef50_UPI0001BC586B Fe-S oxidoreductase n=3 Tax=Fusobacterium... 99 3e-19 UniRef50_C8S672 Radical SAM domain protein n=1 Tax=Ferroglobus p... 99 4e-19 UniRef50_Q3A2R0 Nitrogen fixation protein, MoaA/NifB/PqqE family... 98 5e-19 UniRef50_A5N1T7 NifK/nifB n=3 Tax=Clostridium RepID=A5N1T7_CLOK5 98 7e-19 UniRef50_D2REE1 Radical SAM domain protein n=2 Tax=Euryarchaeota... 97 7e-19 UniRef50_C0BY63 Putative uncharacterized protein n=1 Tax=Clostri... 97 8e-19 UniRef50_Q72WT2 Nitrogenase cofactor biosynthesis protein NifB n... 97 1e-18 UniRef50_C0GRP4 Radical SAM domain protein n=1 Tax=Desulfonatron... 97 1e-18 UniRef50_A0LJ51 Radical SAM domain protein n=4 Tax=Deltaproteoba... 96 2e-18 UniRef50_C5CI47 Radical SAM domain protein n=1 Tax=Kosmotoga ole... 95 3e-18 UniRef50_A8AAC8 Radical SAM domain protein n=1 Tax=Ignicoccus ho... 95 4e-18 UniRef50_B3EE07 Radical SAM domain protein n=10 Tax=Chlorobiacea... 95 4e-18 UniRef50_Q0AY43 Pyruvate formate lyase activating enzyme n=1 Tax... 95 5e-18 UniRef50_B8DNV6 Radical SAM domain protein n=13 Tax=Desulfovibri... 95 5e-18 UniRef50_Q64CF5 Fe-S oxidoreductase n=2 Tax=environmental sample... 94 7e-18 Sequences not found previously or not previously below threshold: UniRef50_B8D1A9 Pyruvate formate-lyase activating enzyme n=12 Ta... 105 4e-21 UniRef50_B9X299 NifB protein n=4 Tax=Paenibacillus RepID=B9X299_... 101 3e-20 UniRef50_Q46267 Pyruvate formate-lyase-activating enzyme n=26 Ta... 101 5e-20 UniRef50_UPI0001692E51 hypothetical protein Plarl_06640 n=1 Tax=... 99 2e-19 UniRef50_B9EA79 Formate acetyltransferase activating enzyme n=90... 99 3e-19 UniRef50_C9RPI8 Pyruvate formate-lyase activating enzyme n=3 Tax... 99 3e-19 UniRef50_C1SID9 Nitrogenase cofactor biosynthesis protein NifB n... 99 3e-19 UniRef50_B5YH11 Nitrogen fixation protein n=1 Tax=Thermodesulfov... 96 3e-18 UniRef50_C8WEP0 Pyruvate formate-lyase activating enzyme n=11 Ta... 95 5e-18 UniRef50_C5BTR1 Pyruvate formate-lyase 1-activating enzyme n=1 T... 94 6e-18 UniRef50_C7NCD1 Pyruvate formate-lyase activating enzyme n=2 Tax... 94 6e-18 UniRef50_A6LHD1 Pyruvate-formate lyase-activating enzyme n=5 Tax... 94 8e-18 UniRef50_Q56JU5 NifB n=2 Tax=Paenibacillus RepID=Q56JU5_9BACL 94 1e-17 >UniRef50_Q6FEM6 Ribosomal RNA large subunit methyltransferase N n=449 Tax=Proteobacteria RepID=RLMN_ACIAD Length = 414 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 216/381 (56%), Positives = 267/381 (70%), Gaps = 12/381 (3%) Query: 2 SEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMT 61 S T E K K+NLL ++R ++ +FF+ +GEK FRA Q+MKW++ Y + EMT Sbjct: 19 SASQTTVEQEVLK-SKVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMT 77 Query: 62 DINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR---VETVYIPEDD----R 114 +I+ LR KL++V EI+APEVV S DGT KW VG+ VETV IP +D R Sbjct: 78 NISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSR 137 Query: 115 ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAK--IVGAAKVTGQRPITN 172 TLC+SSQVGCAL+C FCST +QGF R+L +EIIGQ+W A + + R +TN Sbjct: 138 KTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTN 197 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAI 232 VVMMGMGEPLLN VV +M IMLDD+ +G+SKRRVTLSTSGVVP +DKL + +DVALAI Sbjct: 198 VVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAI 257 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNA--NQGRVTIEYVMLDHVNDGTE 290 SLHAPN+ +RDE+VPINKKY +E +AA +RY+ K + VTIEYVMLD VND E Sbjct: 258 SLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPE 317 Query: 291 HAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 HA QL +LLK+ P KINLIP+NPFP APYGRSS +RI F K L GF +R+TRGDD Sbjct: 318 HAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDD 377 Query: 351 IDAACGQLAGDVIDRTKRTLR 371 IDAACGQL G V DRT+R + Sbjct: 378 IDAACGQLVGQVADRTRRAEQ 398 >UniRef50_B7H072 Ribosomal RNA large subunit methyltransferase N n=68 Tax=Proteobacteria RepID=RLMN_ACIB3 Length = 410 Score = 444 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 214/380 (56%), Positives = 268/380 (70%), Gaps = 11/380 (2%) Query: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTD 62 +Q + + K+NLL ++R ++ +FF+D+GEK FRA QVMKW++ Y +F EMT+ Sbjct: 15 QQQSSSTPASPAAEKVNLLGMSRAELEKFFEDIGEKKFRAGQVMKWIHQYFVTDFAEMTN 74 Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR---VETVYIPEDD----RA 115 I+ LR KL+++ EI+APEVV S DGT KW VG+ VETV IP +D R Sbjct: 75 ISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRK 134 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAK--IVGAAKVTGQRPITNV 173 TLC+SSQVGCAL+C FCST +QGF R+L EIIGQ+W A + +R +TNV Sbjct: 135 TLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANYSYMEEVPVAERERSVTNV 194 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAIS 233 VMMGMGEPLLN + V+ +M IMLDDF +G+SKRRVTLSTSGVVP +D+L IDVALAIS Sbjct: 195 VMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGVVPKIDQLAKDIDVALAIS 254 Query: 234 LHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNA--NQGRVTIEYVMLDHVNDGTEH 291 LHAPNDE+R+E+VPINKKY + +AA +RY+ K + VTIEYVML+ VND EH Sbjct: 255 LHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARKHVTIEYVMLEGVNDQPEH 314 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI 351 A QL +LLK+ P KINLIP+NPFP APYGRSS +RI F K L GF +R+TRGDDI Sbjct: 315 AQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKTLSDAGFVCTIRQTRGDDI 374 Query: 352 DAACGQLAGDVIDRTKRTLR 371 DAACGQL G V DRT+R + Sbjct: 375 DAACGQLVGQVADRTRRAEQ 394 >UniRef50_B8CWT1 Radical SAM enzyme, Cfr family n=2 Tax=Firmicutes RepID=B8CWT1_HALOH Length = 349 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 147/349 (42%), Positives = 219/349 (62%), Gaps = 7/349 (2%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + K +L L+R+++ +F+ G FRA Q+ W+Y D F M ++ VLR +L+E Sbjct: 2 ETKEDLKSLSRKELLMWFEKRGYPSFRASQLFNWIYRNGVDEFSRMNNLPLVLREELEEK 61 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-RATLCVSSQVGCALECKFC 132 + + ++V + ++ DGT+K+ + D +E+V+IP + R ++C+SSQVGC+L CKFC Sbjct: 62 SYLTKLKIVNKSKAEDGTVKYLWELKDGETIESVFIPYEGSRNSVCISSQVGCSLGCKFC 121 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T G RNL EI+ QV + K + K G ++NVV MGMGEPL N+ +V+ A+ Sbjct: 122 ATGLTGLIRNLTPGEIVDQVLQIQKEISNDKY-GSPRVSNVVFMGMGEPLANMKSVLKAI 180 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 EIM D G + KR++T+STSG+VP + +L D + + LAISL+APN+ +RD+++PIN+K Sbjct: 181 EIMNDSKGLNIGKRKITVSTSGLVPQIKELADKKLQIVLAISLNAPNNALRDKLMPINRK 240 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + +E L AVR Y E +N RVT EYV+L ND EHA QL LL D +NLIP+ Sbjct: 241 FPLEKLLEAVRYYTEVTNR---RVTFEYVLLKGTNDSPEHAFQLVNLLSDIHGHVNLIPF 297 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 NP + R S ++RF +L++ G T VR+ RG I+AACGQL Sbjct: 298 NPVQETEFKRPSKETVNRFKDILINNGVETTVRQERGTRIEAACGQLRR 346 >UniRef50_B2U9U6 Ribosomal RNA large subunit methyltransferase N n=47 Tax=Bacteria RepID=RLMN_RALPJ Length = 383 Score = 435 bits (1120), Expect = e-121, Method: Composition-based stats. Identities = 202/371 (54%), Positives = 257/371 (69%), Gaps = 7/371 (1%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 +NLLD + Q + + + LGEK FRA Q+ +W++ F EMTD+ K LR KL A I Sbjct: 5 VNLLDFDAQGLLAYCESLGEKSFRAKQLQRWIHQSGASEFGEMTDLAKSLREKLATRANI 64 Query: 78 RAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 +AP V+ + SSDGT KW + VG VETVYIPE+ R TLCVSSQ GCA+ C+FCST + Sbjct: 65 QAPAVISDHLSSDGTRKWLVDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGK 124 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTG---QRPITNVVMMGMGEPLLNLNNVVPAME 193 QGF+RNL EIIGQ+W A + G R ITNVVMMGMGEPLLN + VVPA+ Sbjct: 125 QGFSRNLSTGEIIGQLWMAEFAMRKQLGRGPKDDRVITNVVMMGMGEPLLNYDAVVPALA 184 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYN 253 +MLDD +GLS+RRVT+STSGVVP +D+L + VALA+SLHA ND +RD +VP+NKKY Sbjct: 185 LMLDDNAYGLSRRRVTVSTSGVVPMMDRLARDVPVALAVSLHASNDALRDVLVPLNKKYP 244 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + +AA RRYLE + + +T EY MLD VND EHA +L ++ D PCK NLIP+NP Sbjct: 245 LAELMAACRRYLEFAPRD--FITFEYCMLDGVNDTVEHARELLRVVADVPCKFNLIPFNP 302 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 FP + RS+N +I RFS+VL+ G T +RKTRGDDIDAACGQLAG+V DRT+ R + Sbjct: 303 FPESGLKRSNNEQIRRFSQVLLDAGIVTTIRKTRGDDIDAACGQLAGEVKDRTRLAERGK 362 Query: 374 MQGEAIDIKAV 384 G+ ++I V Sbjct: 363 F-GKIVEIPVV 372 >UniRef50_Q5LY98 Ribosomal RNA large subunit methyltransferase N n=311 Tax=Bacteria RepID=RLMN_STRT1 Length = 389 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 130/393 (33%), Positives = 209/393 (53%), Gaps = 18/393 (4%) Query: 1 MSEQLVTPENVTTKDGK--------INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHY 52 MSE + K K ++ L R ++ ++ + GEK FRA Q+ W+Y Sbjct: 1 MSEVTTQSKPERRKRQKLEDMEGYKPSIYGLTRDELIDWAVEHGEKKFRATQIWDWLYKK 60 Query: 53 CCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPE 111 +F+EMT+I+K KL + + + Q S DGT+K+ + D +ETV + + Sbjct: 61 RVQSFEEMTNISKDFIAKLNDNFCVNPLKQRIVQESKDGTVKYLFELPDGMLIETVLMRQ 120 Query: 112 DDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPIT 171 ++CV++QVGC + C FC++ R+L EI+ Q+ K ++ Sbjct: 121 HYGLSVCVTTQVGCNIGCTFCASGLIKKQRDLTAGEIVAQIMLVQKYFDDR--GDGERVS 178 Query: 172 NVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVAL 230 +VV+MG+GEP N +NV+ + + +D G + R +T+STSG+ P + + + + V L Sbjct: 179 HVVVMGIGEPFDNYDNVLRFLRTINNDNGLAIGARHITVSTSGLAPKIKEFANEGVQVNL 238 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 A+SLHAPN+++R I+ IN+ + +E A+ Y++ +N RVT EY+ML+ VND E Sbjct: 239 AVSLHAPNNDLRSSIMRINRSFPLEKLFEAIEYYIQTTNR---RVTFEYIMLNEVNDHPE 295 Query: 291 HAHQLAELLKDTP--CKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTR 347 +A +LA+L K INLIP+NP Y RS+ R+ F VL G +VR+ Sbjct: 296 NAQELADLTKKIRKLSYINLIPYNPVSEHDHYSRSTKERVAAFYDVLKKNGVNCVVRQEH 355 Query: 348 GDDIDAACGQLAGDVIDRTKRTLRKRMQGEAID 380 G DIDAACGQL + + R ++ G++ Sbjct: 356 GTDIDAACGQLRSNTMKRDRQKAVAEASGKSEG 388 >UniRef50_A4SYE2 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Proteobacteria RepID=RLMN_POLSQ Length = 402 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 185/386 (47%), Positives = 251/386 (65%), Gaps = 18/386 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 ++NLLD + QM + L EKPFRA Q+M+W++ + ++M+D+ K R L + Sbjct: 2 TSPRVNLLDFDADQMAAYVAGLNEKPFRAKQLMQWIHQRGVSDINDMSDLAKSFRATLLD 61 Query: 74 VAEIRAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIPEDDRATLCVSSQVGCALECKFC 132 E+ + V++++ ++DGT KW + VG VE+V+IPEDDR TLC+SSQ GCA+ C+FC Sbjct: 62 KVEVLSLPVIKDEHATDGTRKWLLDVGAGNAVESVFIPEDDRGTLCISSQAGCAVNCRFC 121 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV--------------TGQRPITNVVMMGM 178 ST +QGF+RNL EIIGQ+W A ++ R I+NVVMMGM Sbjct: 122 STGRQGFSRNLTSGEIIGQLWFAEHLLRNDPEAIRRIEKYPTPGWEHTGRVISNVVMMGM 181 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPN 238 GEPLLN +NVV A+ +MLDD +GLS+RRVT+STSGVVP +D+L VALA+SLHAPN Sbjct: 182 GEPLLNYDNVVSALRLMLDDRAYGLSRRRVTVSTSGVVPMIDRLAQDCPVALAVSLHAPN 241 Query: 239 DEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAEL 298 D +RD++VP+N+KY + L A RYL + + +T EY MLD VND A +L L Sbjct: 242 DALRDQLVPLNQKYPLRELLDACERYLPFAPRD--FLTFEYCMLDGVNDSDIQAKELVRL 299 Query: 299 LKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 L++ CKINLIP+NPFP + RSS R++ F+ +L+ G VRKTRGDDI AACGQL Sbjct: 300 LRNIKCKINLIPFNPFPESGLKRSSAQRVNAFAGILLDAGMVATVRKTRGDDIAAACGQL 359 Query: 359 AGDVIDRTKRTLRKRMQGEAIDIKAV 384 AGDV+DRT+ R + I+I V Sbjct: 360 AGDVVDRTRVRER-DIHSAEIEIAEV 384 >UniRef50_Q3BTW5 Ribosomal RNA large subunit methyltransferase N n=18 Tax=Gammaproteobacteria RepID=RLMN_XANC5 Length = 401 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 200/381 (52%), Positives = 258/381 (67%), Gaps = 16/381 (4%) Query: 12 TTKDGKINLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + K NLLDL+R+ + FF D LGE +RA QVMKW++H +FD+MTD+ K LR K Sbjct: 17 PPESRKQNLLDLDREGLERFFADTLGEARYRAHQVMKWIHHRYVTDFDQMTDLCKALRAK 76 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVG---DQRVETVYIPEDDRATLCVSSQVGCAL 127 L + AE+ P VV ++ S+DGT KW +A+G +ETVYIP+ R TLCVSSQVGC L Sbjct: 77 LHQHAEVLVPNVVFDKPSADGTHKWLLAMGADGKNAIETVYIPDKGRGTLCVSSQVGCGL 136 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C FCSTA QGFNRNL +EIIGQVW AA+ +G QR +TNVVMMGMGEPL+N +N Sbjct: 137 NCTFCSTATQGFNRNLTTAEIIGQVWVAARHLG-NVPHQQRRLTNVVMMGMGEPLMNFDN 195 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVP 247 VV AM +M DD G+GL+ +RVTLSTSG+VP +D+L DV+LA+SLHA ND +R+ +VP Sbjct: 196 VVRAMSVMRDDLGYGLASKRVTLSTSGLVPMIDRLSTESDVSLAVSLHAANDTLRESLVP 255 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--- 304 +NKKY I + + RYL S VT EY ++ +ND EHA QLA L++ Sbjct: 256 LNKKYPIAELMESCARYLRGSKKRDS-VTFEYTLMKGINDQPEHARQLARLMRQFDNAVQ 314 Query: 305 -----KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 K+NLIP+NPFPG Y RS + I F K+L+ T+VR+TRGDDIDAACGQL Sbjct: 315 SKDAGKVNLIPFNPFPGTRYERSGETEIRAFQKILLDAQVLTMVRRTRGDDIDAACGQLK 374 Query: 360 GDVIDRTKRTL--RKRMQGEA 378 G V+DRT+R R+ ++G+A Sbjct: 375 GQVMDRTRRQAEFRRTLEGQA 395 >UniRef50_Q5P7B0 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Aromatoleum aromaticum EbN1 RepID=RLMN_AZOSE Length = 408 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 201/408 (49%), Positives = 260/408 (63%), Gaps = 48/408 (11%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +NLLD + + +F + GEKPFRA QVM+WM+ + +F MTD+ K LR KL E A Sbjct: 3 TPVNLLDFDVDGLVTWFAERGEKPFRARQVMRWMHRFGETDFGNMTDVAKSLRAKLAEEA 62 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 IRAP + + S DGT KW + VG VE V+IPE +R TLC+SSQ GCAL+C FCST Sbjct: 63 CIRAPRAIRDAVSVDGTRKWLLDVGSANAVEAVFIPETNRGTLCISSQAGCALDCAFCST 122 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGA--------------------------------- 161 +QGFNRNL +EIIGQ+W A +++G Sbjct: 123 GKQGFNRNLSAAEIIGQLWLANRLLGGSASPAGSKDGDGGPDHASRATKLDHRAADAKGV 182 Query: 162 ----------AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLS 211 + R I+NVVMMGMGEPL N +NVV A+ +MLDD +GLS+RRVT+S Sbjct: 183 QSDSWRSSDPEEDHNGRVISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGLSRRRVTVS 242 Query: 212 TSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNAN 271 TSG+VPA+D+L D VALA+SLHAP+D +RD +VPIN+KY + +AA +RYLE++ + Sbjct: 243 TSGIVPAMDRLRDECPVALAVSLHAPDDALRDRLVPINRKYPLRELMAACQRYLERAPRD 302 Query: 272 QGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFS 331 VT EYVMLD VND HA L EL++D PCK NLIP+NPFP + + RS RI RF+ Sbjct: 303 --FVTFEYVMLDDVNDSDAHARALVELVRDVPCKFNLIPFNPFPNSGFDRSPAERIRRFA 360 Query: 332 KVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR--KRMQGE 377 +L+ G T RKTRGDD++AACGQLAG V DR++RT+R K M+G Sbjct: 361 AILIDAGIVTTTRKTRGDDVNAACGQLAGQVQDRSRRTVRLVKPMEGR 408 >UniRef50_Q8D1Y5 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Enterobacteriaceae RepID=RLMN_WIGBR Length = 382 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 198/358 (55%), Positives = 270/358 (75%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 + KIN+L R+++ +FF +GE+ FRA+Q+MKW+Y CD+ MTD +K L+ KL Sbjct: 20 NKTNKKINILGKTREELYDFFIKIGEEKFRAEQIMKWIYKRYCDDVSLMTDFSKNLKNKL 79 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKF 131 K + +I ++ E S DGTIKW + + DQ +ETVYIPE +RATLC+SSQ+GCAL CKF Sbjct: 80 KNIIKIDHLDIESENISQDGTIKWVLKINDQNIETVYIPEINRATLCISSQIGCALNCKF 139 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+T+ QGFNRNL EII Q+W A KI+ + ITN+VMMGMGEPLLNL N+VPA Sbjct: 140 CATSYQGFNRNLNSYEIISQIWYAMKIINDRNNFKLKKITNIVMMGMGEPLLNLKNLVPA 199 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 ++I+LD++GFGLSKRR+T+ST+G+ P + KLG +IDV LAISLHAPND IR++I+PINKK Sbjct: 200 IKIILDNYGFGLSKRRITISTAGISPVIKKLGKLIDVKLAISLHAPNDIIRNKIMPINKK 259 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 YNI++ L + ++Y+ S AN+G+++IEY+ML+ +ND TEHA+QL LK+ PCKINLIPW Sbjct: 260 YNIKSILLSAKKYISTSKANKGKISIEYIMLNEINDKTEHAYQLINCLKNIPCKINLIPW 319 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 NPFP Y S+ ++I+ F K+L+ +G TT +RK RG DI AACGQL+G+VI+R + Sbjct: 320 NPFPYVKYKCSNFNKINNFYKILIKHGITTTIRKQRGIDIKAACGQLSGNVINRINKR 377 >UniRef50_Q2N9J2 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Alphaproteobacteria RepID=RLMN_ERYLH Length = 418 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 175/388 (45%), Positives = 230/388 (59%), Gaps = 26/388 (6%) Query: 3 EQLVTPENVTTK-DGKINLLDLNRQQMREFFKDLG----EKPFRADQVMKWMYHYCCDNF 57 + + P ++T + DG+++L+ L + +++E F + G + R+ QV W+YH +F Sbjct: 14 DPVPAPRDITPRADGRVDLMGLPKARIQELFAEAGLDAKQAKLRSKQVYHWLYHRGVTDF 73 Query: 58 DEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRAT 116 + MTDI K +R L E + P VVE Q S+DGT KW + D E V+IP+ DR T Sbjct: 74 EAMTDIAKTMRPWLAERFIVGRPNVVEAQHSTDGTRKWLLQTDDGHDFEMVFIPDADRGT 133 Query: 117 LCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG---------- 166 LCVSSQVGC L C+FC T RNL EI+GQV A +G Sbjct: 134 LCVSSQVGCTLNCRFCHTGTMRLVRNLTPGEIVGQVMLARDALGEWPKGRMDGLDDVEDT 193 Query: 167 ------QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALD 220 R +TN+VMMGMGEPL N +NV A+++++D G LSKRR+TLSTSGVVP ++ Sbjct: 194 GHYSADGRLLTNIVMMGMGEPLYNFDNVRDALKLVMDGEGLALSKRRITLSTSGVVPMME 253 Query: 221 KLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYV 280 + G+ I V LA+SLHA +IRDEIVPINKKY IE L A Y SNA R+T EYV Sbjct: 254 RCGEEIGVNLAVSLHAVTKDIRDEIVPINKKYGIEELLQACADYPGASNA--RRITFEYV 311 Query: 281 MLDHVNDGTEHAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYG 338 ML ND EHA +L LLK + P K+NLIP+NP+PGA Y S+ RI FS ++ G Sbjct: 312 MLKDKNDTDEHARELVRLLKQYNLPAKVNLIPFNPWPGAAYECSTPERIRAFSNIVFEGG 371 Query: 339 FTTIVRKTRGDDIDAACGQLAGDVIDRT 366 + VR RG DIDAACGQL ++ Sbjct: 372 ISAPVRTPRGRDIDAACGQLKTAAQKKS 399 >UniRef50_Q1D6I6 Ribosomal RNA large subunit methyltransferase N 2 n=6 Tax=Cystobacterineae RepID=RLMN2_MYXXD Length = 378 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 148/363 (40%), Positives = 210/363 (57%), Gaps = 6/363 (1%) Query: 4 QLVTPENVTTKDGKINLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTD 62 + P +++ L+ + + F ++LGE+ FRA Q+ +W++ +FDEMTD Sbjct: 10 PVTEPLPAPAPAKLVDVASLSLEALSRFVTEELGERAFRAPQIYRWLHQRGATSFDEMTD 69 Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSS 121 ++KVLR KL+ AEI E RS+DGTIK+ D R +E+VY+P +DR TLCVS+ Sbjct: 70 LSKVLREKLRARAEIVPLVKDCELRSTDGTIKYRWKTRDGRYIESVYMPTEDRRTLCVST 129 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ-RPITNVVMMGMGE 180 QVGCA+ C FC T G RNL SEI+ QV + V + RP++N+V MGMGE Sbjct: 130 QVGCAMACGFCMTGTMGLKRNLTPSEIVAQVHAVNREVRKNEGHETLRPLSNLVFMGMGE 189 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDE 240 PL N N+ A+ I+ + G S R +T+ST G+VP +++ G DV LAISL+A DE Sbjct: 190 PLHNFENLKTALSILQSEDGPNFSHRHITVSTVGLVPMIERFGKETDVKLAISLNASTDE 249 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 R + +P+N+K+NI L A R++ R+T EYV++ ND E AH+L ELLK Sbjct: 250 QRSKTMPVNRKWNIAALLDACRKFPL---RQGRRITFEYVLIKGFNDADEDAHRLIELLK 306 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 P K+NLIP+N PG + + R + F +L +R+ RG DI ACGQLA Sbjct: 307 GIPVKVNLIPYNENPGLGFHTTGEERAEEFRAILADGHVAAYIRRNRGRDIAGACGQLAN 366 Query: 361 DVI 363 Sbjct: 367 RGE 369 >UniRef50_Q2W897 Ribosomal RNA large subunit methyltransferase N n=60 Tax=Alphaproteobacteria RepID=RLMN_MAGSA Length = 456 Score = 424 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 160/356 (44%), Positives = 214/356 (60%), Gaps = 7/356 (1%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 D K NL+ L+R Q+ +GEKPFRA Q+ WMY+ +F +MT I+K + G L E Sbjct: 84 DSKTNLIGLSRDQLIAEMASIGEKPFRAKQLWHWMYNRGETDFAKMTSISKSMHGALAER 143 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPE--DDRATLCVSSQVGCALECKF 131 +R P V +E S+D T KW + D ETVYIP+ ++R +C+S+QVGC L C+F Sbjct: 144 YVVRRPGVTKELISADTTRKWLLKFDDGHEAETVYIPDADEERGAVCISTQVGCTLTCRF 203 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT--GQRPITNVVMMGMGEPLLNLNNVV 189 C T Q RNL +EI+GQ A G G R ++N+V+MGMGEPL N NV Sbjct: 204 CHTGTQLLVRNLSAAEIVGQFMVARDSYGEWPTPDDGGRQLSNIVVMGMGEPLYNFENVA 263 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPIN 249 A+EI +D G G+SKRR+TLSTSGVVP + + G+ + V LA+SLHA DEIRD I+PIN Sbjct: 264 TALEIAMDGEGIGISKRRITLSTSGVVPMMKECGERLGVNLAVSLHAVTDEIRDRIMPIN 323 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 KKY ++ + A R Y SNA R+T EY+ML +ND A L +L+K P K NLI Sbjct: 324 KKYPLKELMQACREYPGASNA--RRITFEYIMLKGINDSAADARALLKLVKGLPAKFNLI 381 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 P+NP+PG+ + FS +L G++ +R RG DI AACGQL + Sbjct: 382 PFNPWPGSEFDTPDIKTTKAFSDILQDAGYSAPIRMPRGRDILAACGQLRSESQRE 437 >UniRef50_Q6ALW1 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Desulfobulbaceae RepID=RLMN_DESPS Length = 362 Score = 422 bits (1086), Expect = e-117, Method: Composition-based stats. Identities = 152/362 (41%), Positives = 212/362 (58%), Gaps = 7/362 (1%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 E +TT KI+L +L++ Q+ EF + LG+ FR Q+M W+Y +F++MTD+ KV R Sbjct: 3 EEITTNREKIDLKNLSQDQLVEFAEKLGQPAFRGRQIMSWLYRPEVRDFEQMTDLAKVFR 62 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCAL 127 L E + + +R+ DG +K+ + D +ETV IPE DR TLC+SSQVGCA+ Sbjct: 63 KLLAENSFFSHFDDPIIERAKDGCVKFGFRLHDGHVIETVLIPEPDRNTLCISSQVGCAM 122 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT---GQRPITNVVMMGMGEPLLN 184 +C FC T GF RNL SEI+ QV A + G +TNVV MGMGEPL N Sbjct: 123 KCTFCMTGGMGFTRNLTPSEIVNQVCAARDFLANEPADKLIGPDRVTNVVYMGMGEPLNN 182 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDE 244 L NV+ ++ I+ + G L+ RR+T+ST G+V + +LG V LAISLHA +D+ RD Sbjct: 183 LENVLTSISILTEQKGLDLTGRRITVSTCGIVANMARLGQEAPVNLAISLHAVDDKTRDM 242 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P+N +Y ++ L A R Y R+ EY+ML +ND A LA L++ PC Sbjct: 243 LMPVNNRYPLDELLEACRTYPMGKRR---RIMFEYIMLAGINDSDTEARTLARKLQEIPC 299 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 KINLIP+N PG PY RI F +L ++ +R +RG+DI AACGQLA D Sbjct: 300 KINLIPYNESPGLPYKSPGMKRILSFQNILREANYSVFIRNSRGEDIAAACGQLATDETT 359 Query: 365 RT 366 + Sbjct: 360 KQ 361 >UniRef50_Q2LUM5 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Syntrophus aciditrophicus SB RepID=RLMN_SYNAS Length = 348 Score = 422 bits (1086), Expect = e-117, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 217/352 (61%), Gaps = 9/352 (2%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +IN+ D++ +++ F LG++ +RA Q+MKW+Y +FDEMT +++ +R +L E+A Sbjct: 4 NRINIRDMSLEEIESFISSLGKEKYRARQIMKWLYSQGAKSFDEMTTLSRAVRDQLNEMA 63 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I PE+ Q+SSDGT K + D +E+V IP T C+S+QVGC + C+FC T Sbjct: 64 CITLPEIARVQQSSDGTRKILFRLQDNSFIESVLIPGKHNWTACISTQVGCHMGCRFCFT 123 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 A+QGF RNL+ SEI GQ+ + I N+VMMGMGEPL N N + A+ I Sbjct: 124 ARQGFRRNLKPSEITGQLTMLQFYL-----PEGPEIKNIVMMGMGEPLANYRNTLKAIRI 178 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 + D+G G S R++TLSTSG+ P +++LG + + LAISL+AP D IR E++P+N+KY + Sbjct: 179 ITSDYGLGFSTRKITLSTSGITPMIEQLGRDLCINLAISLNAPTDSIRSELMPVNRKYPL 238 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + L A R Y + +T EY+++D VN HA L LLK CK+NLI +N F Sbjct: 239 DRLLQACRNYPMP---GRRMLTFEYILIDGVNSSPAHAEMLCRLLKGIRCKLNLIRFNEF 295 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 P P+ S + F ++L+ + +T I+R +RG DI AACGQL+G ++ Sbjct: 296 PDCPFKTPSEETVLAFQQILVKHHYTAIIRASRGRDILAACGQLSGKALEEK 347 >UniRef50_C0GIQ5 Radical SAM enzyme, Cfr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIQ5_9FIRM Length = 347 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 141/351 (40%), Positives = 204/351 (58%), Gaps = 9/351 (2%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K+NLL+L+ +++EFF+ LG+ FRA QVM W+Y F+EMT++ K LR +L + A Sbjct: 3 KVNLLELSTSELQEFFQSLGQPAFRAKQVMDWLYQQGAQTFNEMTNLPKGLREQLAQKAV 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 VV EQ S DGT K+ A+ D Q VETV +P D + C+S+QVGC + C FC++ Sbjct: 63 PGFLSVVTEQVSEDGTEKYLFALPDGQTVETVVLPYDIGFSACISTQVGCKMGCLFCASG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 GF RNL +EI+ QV + + + + ++V+MG GEPL N + +E + Sbjct: 123 LPGFVRNLTAAEIMAQVLQVKNALRK----RGKELKSLVLMGSGEPLDNFRETIAFLEAV 178 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNI 254 D +S R VTLSTSG+VP +++L + + LA+SLHA N+ +RD+I+P+NK Y + Sbjct: 179 RDPQKLAMSLRHVTLSTSGLVPKIEELAKLGWPLNLAVSLHASNNRVRDKIMPVNKTYPL 238 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L+A Y + RVT EY+++D +ND TEHA +LA LLK C +NLIP N Sbjct: 239 EPLLSACDTYSRATGR---RVTYEYILIDRLNDKTEHAKELASLLKGRLCHVNLIPLNAV 295 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 S + + +F L G VR+ G DI AACGQL + + Sbjct: 296 DELGLKPSPQNTVKQFRDTLRQKGVNVTVRRKLGADIAAACGQLRNEYLGE 346 >UniRef50_Q3SNT2 Ribosomal RNA large subunit methyltransferase N n=21 Tax=cellular organisms RepID=RLMN_NITWN Length = 397 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 167/373 (44%), Positives = 219/373 (58%), Gaps = 17/373 (4%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKP----FRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 K +L+ L+R +M E +G R Q+ WMY F EMT ++K +R + Sbjct: 19 PAKPSLIGLSRAEMAERLAAIGIPREQRRMRVQQLWHWMYVRGARTFAEMTSVSKDMRAE 78 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVG-------DQRVETVYIPEDDRATLCVSSQV 123 L++ + PEVV EQ SSDGT KW + + VE VYIPE DR TLCVSSQV Sbjct: 79 LEKHVTLDRPEVVAEQISSDGTRKWLLRLPSGDDLEKPHEVECVYIPETDRGTLCVSSQV 138 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK----VTGQRPITNVVMMGMG 179 GC L C FC T Q RNL EI+GQ+ A + G R +TN+VMMGMG Sbjct: 139 GCTLNCSFCHTGTQRLVRNLTAGEIVGQIMVARDRLNDWADRETPHGNRLVTNIVMMGMG 198 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPND 239 EPL N + V + I+ D+ G G+SKRR+TLSTSGVVP + + G+ I V LAISLHA D Sbjct: 199 EPLYNFDAVRDGLLIVADNEGIGISKRRITLSTSGVVPNIVRAGEEIGVMLAISLHAVRD 258 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E+RDE+VP+N+KY I + A R Y SNA R+T EYVML VND + A +L +LL Sbjct: 259 ELRDELVPLNRKYPIAELMQACRDYPAASNA--KRITFEYVMLKGVNDSLDDARRLVKLL 316 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 KINLIP+NP+PG Y S +I++FS+ + + G+++ VR RG DI AACGQL Sbjct: 317 NGIHAKINLIPFNPWPGTRYECSDWDQIEKFSEYVFNAGYSSPVRTPRGRDILAACGQLK 376 Query: 360 GDVIDRTKRTLRK 372 + + R + Sbjct: 377 SETEKLSARERQA 389 >UniRef50_B9KXX2 Radical SAM enzyme, Cfr family n=2 Tax=Thermomicrobia (class) RepID=B9KXX2_THERP Length = 379 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 141/367 (38%), Positives = 201/367 (54%), Gaps = 11/367 (2%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M+ T T + + L D ++ + + G +RA Q+ W Y ++ M Sbjct: 10 MTVTEWTTPRPTGRVQRETLHDYTLGELEAWVEGRGLPRYRARQLFHWAYQQLVLEYESM 69 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAV-GDQRVETVYIPEDDRATLC 118 + + K +R +L E I V ++ S D TIK D VETV + DR T+C Sbjct: 70 SVLPKAVRSELSETLPISGLVPVRQRVSDDRETIKLLFRTRDDHFVETVVMFYPDRTTVC 129 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 VS Q+GCA+ C FC+T G RNL E++ QV +R I+N+V+MGM Sbjct: 130 VSCQIGCAIGCSFCATGLSGLIRNLSAGEMVSQVVH----AARLARERERRISNIVVMGM 185 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAP 237 GEP N + V+ + I+ D G G+ R +TLST+GVVP +D+L + V LA+SLHAP Sbjct: 186 GEPFHNYDAVMRFVAIVNDRQGLGIGARHITLSTAGVVPFIDRLAEEPYQVKLAVSLHAP 245 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 ND +R ++VPIN+++ I+ LAA RRY+ ++ RVT EYV+++ VND A +LA Sbjct: 246 NDALRSQLVPINRRWPIDELLAACRRYVARTGR---RVTFEYVLIEDVNDDERTAAELAR 302 Query: 298 LLKDTPCKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACG 356 L+ C +NLIP+NP P AP + R RI+RF VL YG VR +RG +I AACG Sbjct: 303 RLRGLLCHVNLIPYNPTPAAPLFRRPGPERIERFRAVLERYGIPATVRYSRGVEIAAACG 362 Query: 357 QLAGDVI 363 QL Sbjct: 363 QLRAQEE 369 >UniRef50_C4Z523 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Firmicutes RepID=RLMN_EUBE2 Length = 350 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 135/350 (38%), Positives = 204/350 (58%), Gaps = 13/350 (3%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++ LN ++ + LGEK FRA Q+ +WM+ D+FDE T+++ LR KLKE +E Sbjct: 2 TDIKSLNYDELVTYMAGLGEKKFRAGQLYQWMHEKLADSFDECTNLSNALRQKLKETSEY 61 Query: 78 RAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 E V Q S DGT K+ + D VE+V + ++C+SSQVGC + C+FC++ Sbjct: 62 VCLEPVRVQHSKLDGTEKYLFRLSDGNYVESVLMKYHHGNSVCISSQVGCRMGCRFCAST 121 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G R+LR SE++ Q++R KI ++NVV+MG GEP+ N +N++ +E++ Sbjct: 122 LNGKVRDLRPSEMLDQIYRIQKIT-------GERVSNVVVMGSGEPMDNYDNLIKFIELL 174 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 D+ G +S+R +T+S+ G+VP L +L D+ + + LAISLHAPNDE+R ++PI KY+I Sbjct: 175 NDERGLNISQRNITVSSCGIVPKLKELADLKLQITLAISLHAPNDELRKTMMPIANKYSI 234 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E + R Y+E + R++ EY ++ VND E A QL EL+K C INLIP NP Sbjct: 235 EEIMDVCRYYIECTGR---RISFEYSLVKGVNDSMECAKQLIELVKGMNCHINLIPVNPI 291 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 Y ++ + F L G +R+ G DID ACGQL ++ Sbjct: 292 KERDYKQTGKEEVYAFKNKLEKNGINVTIRREMGRDIDGACGQLRNKYME 341 >UniRef50_D1Y601 23S rRNA m2A2503 methyltransferase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y601_9BACT Length = 365 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 145/366 (39%), Positives = 209/366 (57%), Gaps = 13/366 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDE 59 M + N K K N ++ F ++L + ADQ+ +W+Y +F Sbjct: 9 MENDELNVTNAPEKATKRNAFEMTLADWERFVQEELDMPRYTADQLCQWIYKKKVFDFRA 68 Query: 60 MTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLC 118 MT+++K LR +L E+ EIR P++ + Q ++DGT K+ + D VE+V + + T C Sbjct: 69 MTNLSKALRERLPELLEIRLPKLAKRQTAADGTRKYLWRLDDGEYVESVLMDHGNHYTAC 128 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 +SSQVGC L C+FC+T QQGF RNL EI+ A + I NVV MGM Sbjct: 129 ISSQVGCPLRCEFCATGQQGFKRNLSAGEIVS-------HFAAMESDVGHDINNVVFMGM 181 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAP 237 GEPLLN NVV A+ + L+ GLS R VT+STSG+ + +L D +D+ L +SLHAP Sbjct: 182 GEPLLNYENVVKAVRMFLEPKMRGLSVRHVTISTSGIPEGIRRLADEGLDIYLCLSLHAP 241 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 N+E+R I+P+N+++ + +A+ + +K+ R+TIEYVML +VND + A++LA Sbjct: 242 NNELRSRIMPVNERFPLGAVFSALEYWQKKTG---VRLTIEYVMLKNVNDTPDCAYELAT 298 Query: 298 LLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQ 357 L + +NLIP+NP G + R S SRI F K+L VRK G DIDAACGQ Sbjct: 299 LFSNLQVYVNLIPYNPVAGTQFARPSASRIAPFMKILKGLNVECEVRKEHGADIDAACGQ 358 Query: 358 LAGDVI 363 L G + Sbjct: 359 LRGKTV 364 >UniRef50_D1PM67 Radical SAM enzyme, Cfr family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM67_9FIRM Length = 345 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 125/353 (35%), Positives = 198/353 (56%), Gaps = 12/353 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI L D ++ + LG+ FRA Q+ KW++ F +MTD K L L+E Sbjct: 2 RKICLSDYTLAELTAYIVGLGQPKFRAKQIFKWLHQKLVTEFTQMTDQPKTLLAVLEEQC 61 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P + +Q+S DGT+K+ + + D +ETV + T+CVS+QVGCA+ C+FC++ Sbjct: 62 TIAVPTIRRKQQSKDGTVKYLLQLADGNCIETVLMRYKYGNTVCVSTQVGCAMGCRFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 Q G R+L EI +++ A K ++++V+MG+GEPL N +NV+ +EI Sbjct: 122 TQAGRVRDLTAGEIAAEIYTAQK-------DSGERVSHIVLMGIGEPLHNFDNVMDFLEI 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + G + R ++LST G+VP +D+L + + L++SLHAP++ R ++P+N Y Sbjct: 175 ISCPEGVNIGMRNISLSTCGLVPKIDELAKRHLQLTLSVSLHAPDNVTRSGMMPVNDAYP 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 +E + A RRY +++ R++ EY M+ VND +E A +LA L+ +NLIP NP Sbjct: 235 LEELIPACRRYQKETGR---RISFEYSMVRGVNDSSEMAQKLARLIHGMGAHVNLIPINP 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 G+PY + + + RF + L G VR+ G DI AACGQL + + Sbjct: 292 VDGSPYSATDEANVRRFQQELEHLGVNATVRRRLGTDISAACGQLRREDAQAS 344 >UniRef50_D0LIH5 Radical SAM enzyme, Cfr family n=2 Tax=Nannocystineae RepID=D0LIH5_HALO1 Length = 378 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 153/366 (41%), Positives = 215/366 (58%), Gaps = 7/366 (1%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 MS + +I+L L+ + +LG+ +R +Q+ +W++ ++M Sbjct: 1 MSTTPPRSGADAPAETRIDLRTLDLAETVALALELGQPRYRGEQIWRWVHGAGVTRLEDM 60 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCV 119 ++ + LR L E + V Q S DGT K + D R +ETV IP+ D+ T C+ Sbjct: 61 ANLPRTLRELLAERTTLGTLRVDAAQTSRDGTRKLRLRTRDGRAIETVLIPDGDKLTQCI 120 Query: 120 SSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 SSQVGCAL+C FC+TA+ G R+L EI+ QV+R ++ + R ITN+V MGMG Sbjct: 121 SSQVGCALDCDFCATAKLGLTRHLDPGEIVDQVYRGRALLAEVEPE--RRITNLVYMGMG 178 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPN 238 EPL N NVV ++ ++ + G LS+RR+T+ST G VP ++KLG + + LAISL+A + Sbjct: 179 EPLHNYANVVKSLRLLTSELGANLSQRRITVSTVGQVPGIEKLGREDVRPNLAISLNASS 238 Query: 239 DEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAEL 298 DEIRD I+P+N+K+NI L AVR Y + RVT EYV+L VND A +L+ L Sbjct: 239 DEIRDRIMPVNRKWNIARLLQAVRDYPLERRR---RVTFEYVLLAGVNDSMADAARLSRL 295 Query: 299 LKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 L+ PCK+N+IPWNP PGAPY R S ++ F G T +R RGDDIDAACGQL Sbjct: 296 LRGIPCKLNIIPWNPHPGAPYQRPSAHAVEAFQNEAKRLGLPTYLRTPRGDDIDAACGQL 355 Query: 359 AGDVID 364 A V Sbjct: 356 AARVEQ 361 >UniRef50_C5EIZ2 Radical SAM enzyme n=11 Tax=Clostridiales RepID=C5EIZ2_9FIRM Length = 354 Score = 417 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 124/359 (34%), Positives = 202/359 (56%), Gaps = 13/359 (3%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 ++T G+ ++ + +++ E LGEKPFRA Q+ W++ +FD M+ ++K LR Sbjct: 3 DLTDNKGRKDIKSMTLEEVTEEMAALGEKPFRAKQIYDWIHVKLAGSFDGMSSLSKELRQ 62 Query: 70 KLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCAL 127 KLK+ + + EE+ S DGT K+ + D + E+V++ ++C+SSQVGC + Sbjct: 63 KLKDNYSLTCLSITEERISQVDGTRKYLFCLEDGNIIESVWMQYHHGNSVCISSQVGCRM 122 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C+FC++ G RNLR SE++ Q++R + ++NVV+MG GEP N +N Sbjct: 123 GCRFCASTLDGLERNLRPSEMLDQIYRIQAHT-------GQRVSNVVVMGSGEPFDNYDN 175 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIV 246 V+ + ++ + G +S+R +T+ST G+VP + + + + V LA+SLHAPNDE+R ++ Sbjct: 176 VIRFLRLISHEKGLNISQRNLTVSTCGIVPGILQFAQEGLAVTLALSLHAPNDEVRKTLM 235 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 PI +Y ++ L A Y EK+ R+T EY ++ VND + A L+ L+KD + Sbjct: 236 PIANRYKLKDVLEACHYYYEKTGR---RLTFEYSLVQGVNDNLDEARALSRLIKDQHGHV 292 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 NLIP NP Y +S I F +L G +R+ G DI ACGQL +++ Sbjct: 293 NLIPVNPIKERDYVQSGRKAIADFKDLLEKNGINVTIRREMGRDIGGACGQLRKSYMEK 351 >UniRef50_A1VAL8 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Desulfovibrionaceae RepID=RLMN_DESVV Length = 364 Score = 417 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 152/355 (42%), Positives = 213/355 (60%), Gaps = 11/355 (3%) Query: 18 INLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 ++L+L +++ F +LGE FRA QV +W++ C +FDEMT+++K R +L E A Sbjct: 2 TDILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKAV 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRA-----TLCVSSQVGCALECK 130 I PEV Q+S+DGT K+ + + D VETV IP R T C+S QVGCA+ C Sbjct: 62 ITWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCT 121 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FCST GF RN+ + EI+GQV A +G ++ + N+V MGMGEPLLNLN V+ Sbjct: 122 FCSTGTMGFERNMTMGEILGQVLVARAHLGDSRPD-HPILRNLVFMGMGEPLLNLNEVMR 180 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINK 250 ++ + D+FG S RR+T+ST G+ L +LG+ LA+SLHAPN EIR I+P Sbjct: 181 SLRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEIRKRIMPKAA 240 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 ++++ + A+ Y K+ RVT EY++L VNDG EHA +L L+ T K+NLI Sbjct: 241 HWHLDDLITALESYPLKTRE---RVTFEYLLLGGVNDGIEHARELVRLVSRTKGKLNLIV 297 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 +NP G PY + RI F + L S T I+RK++G DI AACGQL + R Sbjct: 298 YNPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLKASELQR 352 >UniRef50_Q3A2Z4 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Deltaproteobacteria RepID=RLMN_PELCD Length = 371 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 145/380 (38%), Positives = 222/380 (58%), Gaps = 19/380 (5%) Query: 8 PENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 + +D +I+L + +++ EF +G++ FRA QVM+WMYH D+FD M+D++KVL Sbjct: 1 MDVSMDQDTRIDLKNFTLEELTEFLAGMGKERFRAGQVMRWMYHRLVDDFDAMSDLSKVL 60 Query: 68 RGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-RATLCVSSQVGC 125 R +L + A I + S DGT K+ + D +E+V IP DD RATLC+S+QVGC Sbjct: 61 RAELHQRARISRLTPEATEDSRDGTRKYLFRLEDGETIESVRIPMDDNRATLCISTQVGC 120 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 A+ C FC T G RNL EI+ QV A P+ N+V+MGMGEPL NL Sbjct: 121 AMGCVFCHTGSFGLVRNLTPGEIVNQVCAAL---------ADGPVNNIVLMGMGEPLHNL 171 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEI 245 +NVV A++I+ G S R+VTLST+G+VP + +LG + V LA+SL+A DE+R+ + Sbjct: 172 DNVVKALQILYMPQGLDYSPRKVTLSTAGLVPQMQELGKRVRVNLAVSLNATTDEVRNRL 231 Query: 246 VPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK 305 +P+N++Y ++ +AA R+Y + R+T EY+++ VND + A +L +LL K Sbjct: 232 MPVNQRYPLQQLMAACRQYPLHAK---KRITFEYILIRDVNDSDQDARRLVKLLHGIKAK 288 Query: 306 INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV--- 362 +N+IP+N + + + RI RF L+ +G I R ++G DI AACGQL G + Sbjct: 289 VNIIPFNEHSASEFRAPTEERISRFQGYLLDHGMVAIRRASKGQDISAACGQLKGKLTVS 348 Query: 363 --IDRTKRTLRKRMQGEAID 380 ++R + + + Sbjct: 349 PPAQESERNSARPDRSQGKG 368 >UniRef50_Q54J76 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54J76_DICDI Length = 407 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 144/365 (39%), Positives = 210/365 (57%), Gaps = 5/365 (1%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 T KINL+ + + ++ + LG + ++Q+ +MY+ + + ++K R Sbjct: 41 EKTDIIKKINLIGIQKDELEDKVLKLGYPKYLSEQIWAFMYNKGIVDINSFERVSKEKRE 100 Query: 70 KLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALEC 129 ++K E+ E+ + Q S DGT K I+ VE+V+IPE R TLCVSSQVGC C Sbjct: 101 EIKSKYEVNIGEITKHQLSVDGTRKLLISFDGAEVESVFIPEGKRGTLCVSSQVGCTFAC 160 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIV-GAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 FC T Q F RNL SEI+ QV ++ + +R +TN+V MG GEP N NV Sbjct: 161 TFCHTGTQKFIRNLTASEIVSQVIATRHVLNDFTDSSIKRTLTNIVFMGQGEPFYNYRNV 220 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVP 247 A++I+ D G + K ++T+STSGVVP +D+LG D + LAISLH+ ND+ R EIVP Sbjct: 221 SKAIKIITDPNGLAIGKSKITVSTSGVVPLIDRLGSDFPGIGLAISLHSANDKTRSEIVP 280 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 N+++ I + A ++ S + R+TIEYVML VND + A+ L +L K P +N Sbjct: 281 ANRQWPISELVEAC---IKFSKNCKERITIEYVMLKGVNDSEQDAYDLVKLSKSFPSFVN 337 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 LIP+NP+PG+ Y SS I +FSK+L G +R+ RG DI AACGQL + I Sbjct: 338 LIPFNPWPGSQYKSSSKETISQFSKILDDKGIKVTIRQPRGRDILAACGQLNTESIKEIN 397 Query: 368 RTLRK 372 + ++ Sbjct: 398 KPIQP 402 >UniRef50_A3DCX9 Ribosomal RNA large subunit methyltransferase N n=11 Tax=Clostridia RepID=RLMN_CLOTH Length = 349 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 137/353 (38%), Positives = 210/353 (59%), Gaps = 14/353 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 D K +LL + +++ ++GE+ FRA Q+ +W + + D MT+++K LR KLKE Sbjct: 2 DAKADLLSMTIEELENLMAEMGEQKFRAKQIFQWT-NKGIKDIDAMTNLSKDLREKLKER 60 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 A I EV+++ S DGTIK+ + D + E+V + + C+SSQVGC + CKFC Sbjct: 61 AYINRLEVIKKFVSKIDGTIKYLFKLNDGNIIESVLMQYLHGYSACISSQVGCKMGCKFC 120 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL E++ Q+ I NVV+MG+GEPL N NVV + Sbjct: 121 ASTGVGFVRNLTPGEMLDQILTIQNDTKN-------RIGNVVIMGIGEPLDNYENVVKFL 173 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 ++ G L R +++ST G+VP + +L + I V L+ISLHAPNDEIR++I+PINK+ Sbjct: 174 RLVNHKDGINLGARHISVSTCGLVPEILRLAEEKIPVTLSISLHAPNDEIREKIMPINKR 233 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y+I+ + A + Y E +N R+T EY M+D +ND E+A +LA+ ++ C +NLIP Sbjct: 234 YSIDKIIEACKIYTETTNR---RITFEYAMIDGLNDSKENALELAKRIRGMLCHVNLIPV 290 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 N + RSS +I F ++L +G T VR+ G DI+AACGQL ++++ Sbjct: 291 NTVSDTGFKRSSREKITAFKEILERFGVETTVRRELGSDINAACGQLRRNLVE 343 >UniRef50_B0UQR1 Ribosomal RNA large subunit methyltransferase N n=102 Tax=Bacteria RepID=RLMN_METS4 Length = 431 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 173/405 (42%), Positives = 230/405 (56%), Gaps = 29/405 (7%) Query: 4 QLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEK----PFRADQVMKWMYHYCCDNFDE 59 V PE + G+ +L+ L R +RE +G R Q+ W+ +F+ Sbjct: 25 PEVRPEAMVAT-GRPSLVGLTRGALRERLAAIGVPEREQRMRTGQLWHWINVRGAASFEA 83 Query: 60 MTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVG---------DQRVETVYIP 110 MT++ K L+ +L+E + PEVV EQ S DGT KW + + +E VYIP Sbjct: 84 MTNVGKGLKAQLEEAYTLDRPEVVSEQVSRDGTRKWLLRMPPTGRHDHNRGAEIECVYIP 143 Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK------- 163 +DR TLCVSSQVGC L C FC T Q RNL EI Q+ A +G Sbjct: 144 ANDRGTLCVSSQVGCTLTCSFCHTGTQRLVRNLSAQEITAQLVVARDRLGDWPGQVPPKG 203 Query: 164 ----VTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL 219 V G R ++N+V MGMGEPL N++NVV A+ +M D+ G GLS+RR+T+STSGVVP Sbjct: 204 TFVPVDGSRFVSNIVFMGMGEPLYNVDNVVDAVGVMSDNEGLGLSRRRITVSTSGVVPQF 263 Query: 220 DKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEY 279 ++LG + LAISLHA D++RDE+VP+N+KY I T L A R Y SNA R+T EY Sbjct: 264 ERLGIDANAMLAISLHAVRDDLRDELVPLNRKYPIRTLLEACRNYPGVSNA--RRITFEY 321 Query: 280 VMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGF 339 VML VND A +L LLK P KINLIP+NP+PG+ Y S RI+RFS+++ + G+ Sbjct: 322 VMLKGVNDSDSEARELVRLLKGIPAKINLIPFNPWPGSRYECSDWERIERFSEIVFNAGY 381 Query: 340 TTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV 384 + VR RG DI AACGQL + R + M + I + V Sbjct: 382 ASPVRTPRGRDILAACGQLKSET--EKLRARARLMLEDGIGAEGV 424 >UniRef50_D1CBZ4 Radical SAM enzyme, Cfr family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBZ4_THET1 Length = 371 Score = 416 bits (1069), Expect = e-115, Method: Composition-based stats. Identities = 138/366 (37%), Positives = 205/366 (56%), Gaps = 12/366 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M L +N K K +LLDL+ Q++RE+ + +RA QV + +Y + ++M Sbjct: 3 MHSALGIAKNKNHKPAK-SLLDLSLQELREWIRLRDYPEYRAVQVWQAIYRQLEVDPEKM 61 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPE-DDRATL 117 T + K LR L V + G T K + D +E+V + D RAT+ Sbjct: 62 TSLPKALREVLSAEFPFPNITPVRTFVADGGDTEKVLFQLEDGNAIESVLMEYMDGRATV 121 Query: 118 CVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMG 177 CVSSQ GCA+ C FC+T GF RNL EI+ Q+ +K + + +TN+V MG Sbjct: 122 CVSSQAGCAIGCTFCATGLGGFYRNLSAGEIVYQILYFSKKLR----DKGKRLTNIVYMG 177 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHA 236 MGEPL NL+ V ++E + + G S RR+T+ST+G+V +D+ + V LAISLHA Sbjct: 178 MGEPLANLDAVWRSVENLHEPTGMNFSARRITISTAGLVHQIDRFPPTDLQVNLAISLHA 237 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 PND++R I+PIN+++ I +A+ +RY+E+++ R+T EYV++ N EHA L+ Sbjct: 238 PNDDLRTSIMPINRRWPISELIASAKRYVERTHR---RITFEYVLIAGCNSSKEHARDLS 294 Query: 297 ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACG 356 LL+ C +NLIP N PG+P+ S ++ F +L+S G VR RG DI AACG Sbjct: 295 NLLRGLLCHVNLIPLNRVPGSPFEPPSTEEVNTFRDILLSAGIPCTVRLERGADILAACG 354 Query: 357 QLAGDV 362 QL + Sbjct: 355 QLRMEH 360 >UniRef50_B8HRU7 Radical SAM enzyme, Cfr family n=2 Tax=Chroococcales RepID=B8HRU7_CYAP4 Length = 367 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 122/365 (33%), Positives = 202/365 (55%), Gaps = 15/365 (4%) Query: 7 TPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKV 66 T E+ T LL ++ ++ E+ LG+ +R Q+ +W+Y + E++ K Sbjct: 16 TVESAPTHPKLPPLLGASQAELTEWITALGQPAYRGQQLHQWLYQKGVRSLTEISVFPKA 75 Query: 67 LRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGC 125 R ++ EVA + ++ ++ DGT+K+ + + D ++ ETV IP + R T+CVSSQVGC Sbjct: 76 WRQQVAEVA-VGRSQLHYRSQAQDGTVKYLLRLDDGQIIETVGIPSNRRLTVCVSSQVGC 134 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 + C FC+T + GF R+L EI+ QV + ++NVV MGMGEPLLNL Sbjct: 135 PMGCDFCATGKGGFRRHLDRHEIVDQVLTVQADF-------GQRVSNVVFMGMGEPLLNL 187 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDE 244 V+ A+ + D G + +R +T+ST G+ + +L + + LA+SLHA N +R + Sbjct: 188 EAVLEAVRCLNQDVG--IGQRFLTISTVGIPGQIRRLANHHLQATLAVSLHASNQPLRAQ 245 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P + Y +E L R Y++ + RV+ EY++L +ND +HA +LA+ L+ Sbjct: 246 LIPSARHYPLENLLQECRDYVQLTGR---RVSFEYILLGGLNDLPQHALELAQHLRGFQS 302 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP+NP Y R S R+ F ++L + +R++RG D +AACGQL + + Sbjct: 303 HVNLIPYNPISEVDYQRPSPQRMQHFLQLLQEHHIAASIRRSRGLDQNAACGQLRANQMA 362 Query: 365 RTKRT 369 K + Sbjct: 363 GVKSS 367 >UniRef50_Q7UHU7 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Rhodopirellula baltica RepID=RLMN_RHOBA Length = 371 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 144/359 (40%), Positives = 218/359 (60%), Gaps = 10/359 (2%) Query: 5 LVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDIN 64 + T ++ +T K +LL+ + Q++++ ++ G+KPFRA Q+ +W++ +F+EMTD+ Sbjct: 13 VTTTDSESTGPRKNHLLNWSLDQLKDWLQEQGQKPFRAKQIRRWLFSGRATSFEEMTDLP 72 Query: 65 KVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQV 123 LR +L+E I +S DGT K + + D VE V + + R ++CVSSQV Sbjct: 73 AKLRAQLEEHFAIFNATEAVVSKSKDGTEKILVRLADGGEVECVLLRDGPRRSICVSSQV 132 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCA+ C FC++ G +RNL EI+ Q+ R + + ++++VMMGMGEPL Sbjct: 133 GCAMGCVFCASGLDGVDRNLTGGEILEQMLRLQQRL-----PADERLSHIVMMGMGEPLA 187 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIR 242 NL V+ A+++ + G G+S RR+T+ST G+ PA+DKL LA+SLHAPNDE+R Sbjct: 188 NLPGVLSALDVARSEDGLGISPRRITISTVGLPPAIDKLAAAGIPYNLAVSLHAPNDELR 247 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 E+VP+N+K IE L A RY S R+T EYV+L +NDG EHA QL+++L+ Sbjct: 248 SELVPVNRKIGIEPVLQAADRYFHASGR---RLTFEYVLLGGINDGDEHARQLSQILRGR 304 Query: 303 PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 +N+IP+NP G PY S + I RF +L S G R+ +GD+I+AACGQL + Sbjct: 305 SVMMNVIPYNPVAGLPYRTPSGAAIARFRAILESAGVNVNFRQRKGDEINAACGQLRRN 363 >UniRef50_B6BF31 Radical SAM enzyme, Cfr family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF31_9RHOB Length = 413 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 179/392 (45%), Positives = 244/392 (62%), Gaps = 14/392 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEK----PFRADQVMKWMYHYCCDN 56 +++ ++T + GKINL+ L R +MRE + G R Q+ +W+Y + + Sbjct: 7 ITQDVLTLPRKDPEGGKINLVGLTRDRMREVLMEHGTPEKQAKMRVGQIWQWIYQWGKRD 66 Query: 57 FDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV-GDQRVETVYIPEDDRA 115 F EMT++ K R +L E EIR PEVV +Q S+DGT K+ + + G VE VYIPE+DR Sbjct: 67 FAEMTNLAKAYRAQLAETFEIRIPEVVSKQVSTDGTRKYLVRIAGGHEVEVVYIPEEDRG 126 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP-----I 170 TLC+SSQVGC L C FC T Q RNL +EI+GQV A + V G + Sbjct: 127 TLCISSQVGCTLTCSFCHTGTQKLVRNLTPAEIVGQVMMARDDLEEWPVPGAPKEETRLL 186 Query: 171 TNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVAL 230 +N+V+MGMGEPL N +NV AM+I +D G LS+RR+TLSTSGVVP + + I L Sbjct: 187 SNIVLMGMGEPLYNFDNVRDAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAQEIGCLL 246 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 AIS HA +E RD +VPINK++NI+ L A+ Y + SN+ R+T EYVMLD VND E Sbjct: 247 AISFHATTNETRDVLVPINKRWNIDELLQALADYPKASNSE--RITFEYVMLDGVNDTDE 304 Query: 291 HAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRG 348 AH+L + +K + P KINLIP+N +PG+PY RSSN+RI F+ ++ G+ + +RKTRG Sbjct: 305 DAHRLIDHIKRYNIPAKINLIPFNEWPGSPYKRSSNNRIRAFANIIYQAGYASPIRKTRG 364 Query: 349 DDIDAACGQLAGDVIDRTKRTLRKRMQGEAID 380 DDI AACG +V DRT + +G + D Sbjct: 365 DDIMAACGLRPAEVSDRTCPQEPQADRGRSRD 396 >UniRef50_B5YF42 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Dictyoglomus RepID=RLMN_DICT6 Length = 348 Score = 414 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 143/350 (40%), Positives = 203/350 (58%), Gaps = 10/350 (2%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+L + ++R+ + GE +RADQ+ W+Y N MT++ K LR K+ E Sbjct: 3 NILSFDIDEIRDILRGWGEPSYRADQIFDWVYKKLILNPSSMTNLPKGLRQKIAEYFSFD 62 Query: 79 APEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 P+VV+ T K+ + + D + +ETV I +R T+CVS QVGCA+ CKFC+T Sbjct: 63 IPKVVKI-TGEGNTKKYLLELEDGENIETVLISHKNRNTVCVSVQVGCAIGCKFCATGLV 121 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G RNL EI+GQ+ K + I+NVV MGMGEPLLN +NVV ++ I+ Sbjct: 122 GLRRNLNTHEIVGQIILIQKEL----FEKGDRISNVVYMGMGEPLLNYDNVVKSIRIINR 177 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 ++G + + +TLST G+VP + +LG+ + V LAISLHAPN+E+R +I+PINK+Y IE Sbjct: 178 EWGLNIGSKHITLSTIGIVPKIYQLGEEDLKVRLAISLHAPNNELRSKIIPINKEYPIEK 237 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L + Y EK+ RVT EYV++ + ND EHA +LA LLK+ P +NLIPWN P Sbjct: 238 LLESAFYYAEKTGR---RVTFEYVLIKNFNDREEHAIELAGLLKNKPVHVNLIPWNKVPE 294 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 P+ S I +F K+L G +R + G I A CGQL + Sbjct: 295 YPWETSDLKDIFKFKKILSDAGINVTLRISYGSRIKAGCGQLRALYLKSK 344 >UniRef50_B8DRU2 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Desulfovibrionales RepID=RLMN_DESVM Length = 367 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 148/355 (41%), Positives = 213/355 (60%), Gaps = 11/355 (3%) Query: 18 INLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 I++L+L ++ + LGE FRA QV +W++ +FD MT+++K R +L E A Sbjct: 2 IDILNLTYDELEAWMTGTLGEPRFRARQVWQWLWQKNARSFDAMTNVSKATRARLAEAAR 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDR-----ATLCVSSQVGCALECK 130 I PEV + SSDGT+K+ +A+ D VETV IP + R T C+S QVGCA+ C Sbjct: 62 ITWPEVRTVKTSSDGTVKFLLALADGALVETVLIPSESREGKVRMTQCLSCQVGCAMGCT 121 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FCST GF RN+ ++EI+GQV A + +G + + N+V MGMGEPLLNLN V+ Sbjct: 122 FCSTGSMGFERNMTMAEILGQVLVAREHLGDDRPD-HPIVRNLVFMGMGEPLLNLNEVMR 180 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINK 250 ++ + D+FG S RR+T+ST G+ L +LG+ LA+SLHAPN E+R I+P Sbjct: 181 SLRTLNDEFGLCFSPRRITVSTCGIEKGLRELGESGLAFLAVSLHAPNQEVRARIMPRAA 240 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 ++ ++ +AA+ Y K+ R+T EY++L VND +HA +L L+ T K+NLI Sbjct: 241 RWTLDDLMAALESYPLKTRE---RITFEYLLLGGVNDSIDHARELVRLVSRTKAKLNLIV 297 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 +NP G PY S +RI F + L S T I+RK++G DI AACGQL + Sbjct: 298 YNPAEGLPYEAPSQARILAFEQYLWSKNVTAIIRKSKGQDIKAACGQLKASELAE 352 >UniRef50_A9KM95 Ribosomal RNA large subunit methyltransferase N n=67 Tax=Bacteria RepID=RLMN_CLOPH Length = 356 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 126/354 (35%), Positives = 200/354 (56%), Gaps = 13/354 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 KI++ L ++++ K +GEK FRA Q+ +W++ +F+EMT+++K LR KL Sbjct: 6 EKIDIKALTLEELKASLKIIGEKEFRAKQIYEWLHVKLVRDFEEMTNLSKELRAKLASEY 65 Query: 76 EIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCS 133 E+ +E S DGT+K+ + D V E V + ++C+SSQVGC + C+FC+ Sbjct: 66 ELICVNDLERYESKMDGTVKYLFRLSDGNVVECVLMKYHHGNSVCISSQVGCRMGCRFCA 125 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 + G RNL+ SE++ +V++ ++ ++N+V+MG GEP+ N +N V + Sbjct: 126 STLGGLTRNLKTSEMLDEVYQIQRL-------SGERVSNIVIMGTGEPMDNYDNFVKFIR 178 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKY 252 ++ G +S+R +T+ST G+VP + L + + LA+SLHAPNDE R +I+P+ Y Sbjct: 179 MISSSDGLNISQRNITVSTCGIVPKMRALAEEGFAITLALSLHAPNDEERAKIMPVANSY 238 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 ++ L A Y EK+ RV+ EY ++D VND A +L+ LLK C +NLIP N Sbjct: 239 QLQDVLNACDYYYEKTGR---RVSYEYSLVDGVNDTAACAKELSRLLKGKNCHVNLIPVN 295 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 P Y RS+ + I F +L +R+ G DI+AACGQL D+T Sbjct: 296 PIKERDYKRSTGNNIQNFKNILEKNRINVTIRREMGSDINAACGQLRKSYTDKT 349 >UniRef50_A5CX33 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=RLMN_VESOH Length = 356 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 173/359 (48%), Positives = 246/359 (68%), Gaps = 6/359 (1%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K NLL LN+ + +FF LGEK +R Q+M+W+Y +FD+M + +K LR +L ++A Sbjct: 2 NKQNLLSLNQDALNDFFVCLGEKHYRTKQIMQWIYKVHEFDFDKMFNFSKSLREELNKIA 61 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P+VV+++ + D IKW +A+ D +E VYIPE DR TLC+SSQVGCAL C FCST Sbjct: 62 CIEFPKVVKQKFALDKVIKWVLALSEDNYIEMVYIPEKDRGTLCISSQVGCALACTFCST 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 QGFN+NL +EII QV A K + + + I+N+V MGMGEPLLN V A ++ Sbjct: 122 GMQGFNKNLTTAEIIAQVLIANKYLN----SKTKRISNIVFMGMGEPLLNEQAVYNACDL 177 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 +LDD FGLS+R+VT+STSG+VP++ ++ V+LAISLHAPN+++RD++VP+N+KY+I Sbjct: 178 LLDDLAFGLSRRKVTISTSGIVPSILRMSKRTPVSLAISLHAPNNQLRDKLVPVNQKYSI 237 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L A + YL + + + EYVML VND TEHA++LA+LLK K+NLIP+N F Sbjct: 238 EELLKACKVYLN-AGTQERHILFEYVMLKDVNDSTEHANKLAKLLKAISAKVNLIPFNSF 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 Y S+ I++F +L G T++R+TRG+DID ACGQLAG V+++TK+ ++ Sbjct: 297 ERTQYQSSNAQTIEKFQDILYQQGIRTMMRRTRGEDIDGACGQLAGKVLNKTKKLNARK 355 >UniRef50_A9WFY6 Ribosomal RNA large subunit methyltransferase N n=4 Tax=Chloroflexi (class) RepID=RLMN_CHLAA Length = 376 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 195/353 (55%), Gaps = 14/353 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L D N ++ E + GE FRA Q+ + +Y D+MTD+ LR +L E+ Sbjct: 10 LYDYNLSELTELLQSWGEPAFRARQLYRHLYVNLARQVDQMTDLPLALRSRLAEI-PFST 68 Query: 80 PEVVEEQRSSDG-TIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 + Q +G T K + D V ETV + DR+T+CVS+Q GC + C FC+T Q Sbjct: 69 LRCEQVQIGDNGMTRKALFRLPDGAVVETVLMVYPDRSTVCVSTQAGCGMGCVFCATGQL 128 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR-PITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL EI+ Q A++ + A + G ++N+V MGMGEP N + A+E + Sbjct: 129 GLLRNLSSGEIVAQAIWASQELRAMGMAGPTGRVSNLVFMGMGEPFANYDRWWQAVERLH 188 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D GF L R +T+ST G+V +++L + + + LAISLHAP+D +R E++P+N++Y I Sbjct: 189 DPQGFNLGARSMTVSTVGLVKGIERLANERLPINLAISLHAPDDALRSELMPVNRRYPIA 248 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK------DTPCKINLI 309 +AA R Y+ K+ RV+ EYV+L ND A LA LL+ +NLI Sbjct: 249 DLMAATRNYIAKTRR---RVSFEYVLLQGKNDHPHQAIALARLLRHSAPRGPLLFHVNLI 305 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 PWNP PG P GRS R+ F ++L YG VR RG +I AACGQLAG Sbjct: 306 PWNPVPGTPLGRSEWERVTTFQQILTDYGIPCTVRVERGVEIAAACGQLAGRH 358 >UniRef50_C1TNK6 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNK6_9BACT Length = 341 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 145/343 (42%), Positives = 207/343 (60%), Gaps = 13/343 (3%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 L+ N + R F + GE +RADQ+ +W+Y + MT+++K LR KL+ ++ P Sbjct: 8 LEFNYDEWRNFVDEAGEPSYRADQLCQWIYGKKVFDIHRMTNLSKDLRSKLEGHLYVQPP 67 Query: 81 EVVEEQRSSDGTIKWAIA-VGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 V+ Q+SSDGT+K+ + Q VE+V + + T C+S+QVGC L C FC+T +QGF Sbjct: 68 FAVDVQKSSDGTVKFLWRFLDGQEVESVLMDHGNHHTACLSTQVGCPLRCDFCATGRQGF 127 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL V EI+G +G I N+V MGMGEPLLN NV A+EI+ Sbjct: 128 VRNLTVGEIVGHFLAMESWLGQD-------IKNIVFMGMGEPLLNWENVKKAIEILNHPK 180 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G+ RR+T+STSGVVP + L D +DV L+ SLHAPND+IR +++P+N++Y + + Sbjct: 181 MRGMGIRRITISTSGVVPGILALADSGLDVRLSFSLHAPNDQIRSKLMPVNERYPLGQVV 240 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 A++ + +K+ R+T+EYV+L +ND A+++A LL D INLIP+NP Sbjct: 241 EALQEFQKKTGN---RITVEYVLLKRINDEPSMAYEIAALLSDLDVYINLIPYNPVVE-R 296 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 YGR S SRI+ F L G +RK +G DIDAACGQL G Sbjct: 297 YGRPSASRINPFMATLRELGLEVELRKEKGTDIDAACGQLRGK 339 >UniRef50_A6TRW3 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Firmicutes RepID=RLMN_ALKMQ Length = 352 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 133/361 (36%), Positives = 209/361 (57%), Gaps = 14/361 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K++LL L ++M F ++GEK FRA Q +W+ + ++EMT+++K L +L E Sbjct: 3 KVDLLSLTMEEMESLFLEIGEKKFRAKQAFQWV-NKGIKQYEEMTNLSKKLIKQLSEETR 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 I + E+ S DGT+K+ + D + E V + T C+S+QVGCA+ C+FC++ Sbjct: 62 ITHNRIEEKFVSKIDGTVKYLFLLDDGHIIEGVLMKYKHGFTACISTQVGCAMGCQFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 G RNLR E+I Q+ + I+N+V+MG GEPL N + + ++I Sbjct: 122 TTGGLIRNLRAGEMIDQILLMQQ-------DQGERISNIVLMGSGEPLHNYDETIRFLKI 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 + D G + R +TLST G+VP + KLG + I + LAISLHAPND++R + +PI +KY Sbjct: 175 VNDPEGLNIGNRHITLSTCGLVPEIKKLGALQIPINLAISLHAPNDQLRKQTMPIAQKYT 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I+ + + YLE +N R+T EY +++ VNDG + AH+L++LLK C +NLIP NP Sbjct: 235 IDQLIQSCYDYLENNNR---RITFEYALIEDVNDGEKEAHELSKLLKGLLCHVNLIPINP 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 Y +S +S++ +F ++L S G +R+ G DI ACGQL +D ++ Sbjct: 292 IEERTYQKSKDSQVKKFQQILKSNGIEATIRREMGTDIQGACGQLRRKYVDDQEKKEISE 351 Query: 374 M 374 + Sbjct: 352 V 352 >UniRef50_A4ECT0 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4ECT0_9ACTN Length = 350 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 122/354 (34%), Positives = 191/354 (53%), Gaps = 12/354 (3%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + + ++ DL++ +RE +LG+ FRA Q+++W++ +FD+MT++ K R + Sbjct: 1 MNPRTKSQDIRDLSQNDIRELVAELGQPAFRAKQLIEWVFEKNVCSFDDMTNLPKAFREQ 60 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALEC 129 LKE P + +Q S DG+ K+ + D VETV +P ++ ++CVS+Q GC + C Sbjct: 61 LKEAFAFDTPTELTKQVSKDGSRKYLLEYHDGVSVETVGMPRRNKLSVCVSTQAGCGMGC 120 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T G R+L EI+ QV + T+VV MG GEP N + V+ Sbjct: 121 AFCATGLNGLKRSLTAQEIVDQVLHVSNDF-------GERATSVVFMGQGEPFANYDEVL 173 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPI 248 A+ I+ D G G+ R +T+STSGV+P + K D+ LA+SLH+ R++++P Sbjct: 174 KALRILNDPDGIGIGARHLTVSTSGVIPGIRKFADIPEQFTLAVSLHSAIQSTRNKLMPG 233 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 KKY + A++ Y EK+ R T EY M++ VND L + + T C +NL Sbjct: 234 VKKYTLFRLHEALQLYTEKTGR---RPTYEYAMIEGVNDTNPEMQALCDFCEGTLCHVNL 290 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 I N G+P S +++ + L S G T +R +RG+DIDAACGQL Sbjct: 291 IQLNDIEGSPLKPSPIHKVEDLQRRLESRGIETTIRNSRGNDIDAACGQLKQRF 344 >UniRef50_B5EJF0 Radical SAM enzyme, Cfr family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJF0_ACIF5 Length = 363 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 165/363 (45%), Positives = 229/363 (63%), Gaps = 11/363 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + +LL L RQ + + + GE PFRA+Q+++W++ +F MTDI+K LR +L Sbjct: 11 AERPHLLGLGRQSLAKLLRTWGESPFRANQILQWLHTRQVTDFAAMTDISKTLRARLAAE 70 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCS 133 I PE++ +Q ++D T KW + + D +ETV+IP +DR TLC+SSQVGC+L C FC+ Sbjct: 71 TRIDMPEIIADQTAADCTRKWLLRLPDGNAIETVFIPGEDRGTLCISSQVGCSLACSFCA 130 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 T QG +RNL EII QV A +G ITN+V MGMGEP+LNL V+PA++ Sbjct: 131 TGAQGLSRNLETHEIIAQVRVARDFLGLDA------ITNIVFMGMGEPMLNLREVLPALD 184 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYN 253 ++ DD+ +G RR+T+ST+GVVP +D+LG V LAISLHA DEIRD +VP+N+ Y Sbjct: 185 LLRDDYAYGFGARRITVSTAGVVPGMDRLGAESPVNLAISLHASRDEIRDILVPVNRHYP 244 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + LAA + R+T EYVML+ VND HA +L LL+D P +NLIP+NP Sbjct: 245 LAELLAAC---RRYPLPPRRRITFEYVMLEGVNDADSHARELLRLLRDIPAMVNLIPFNP 301 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 FPG+ Y RS RID F +++ T+ R+ RGDDI AACGQLAG V +R++ Sbjct: 302 FPGSDYKRSPQVRIDAFRDIILRGNVMTVTRRPRGDDIAAACGQLAGQV-RAGRRSIPLA 360 Query: 374 MQG 376 + Sbjct: 361 VHS 363 >UniRef50_Q2RK16 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RLMN_MOOTA Length = 354 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 134/350 (38%), Positives = 197/350 (56%), Gaps = 11/350 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +I+L L Q++ E LGE P+R Q+ +W++ + M+D+ + R +L VA Sbjct: 3 TRIDLRGLLPQELEELAVRLGEAPYRGRQIFRWLHARRAKGIEVMSDLPRAFRERLALVA 62 Query: 76 EIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDD---RATLCVSSQVGCALECK 130 E+ V+ ++DG T K + +GD +E V + D R T C+SSQVGCA+ C Sbjct: 63 ELPPVRVLNRLVAADGLTRKLLLGLGDGNSIECVLMIYKDGRRRNTACLSSQVGCAMGCS 122 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+T Q G RNL SEII Q + + G I+N+V MGMGEPL N V+ Sbjct: 123 FCATGQGGLQRNLTASEIILQALALGAELA--EGEGGNRISNIVFMGMGEPLNNYEAVMK 180 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 + I D G+G+S RR+TLST G+VP +++L + + LA+SLHA +E+RD+++PIN Sbjct: 181 GVRIFEDPSGWGISHRRITLSTCGIVPGIERLAREKPPLELAVSLHAVTNELRDKLMPIN 240 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 ++Y +E + A RRY E + RVT EY ++ VND E A L+ LL+D +N+I Sbjct: 241 RRYPLEELIPACRRYAEITGR---RVTFEYALIAGVNDRREDARGLSRLLRDMLAFVNII 297 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 P NP G+ + + F +L G +R +RG DI AACGQL Sbjct: 298 PLNPVAGSGFKGVPPAAARAFVALLQEAGLEAAIRDSRGQDIAAACGQLR 347 >UniRef50_A7HNQ1 Ribosomal RNA large subunit methyltransferase N n=11 Tax=Thermotogaceae RepID=RLMN_FERNB Length = 348 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 138/357 (38%), Positives = 205/357 (57%), Gaps = 16/357 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 + N+LD + +++ + F +G + FR DQV W+Y +FD+MT+++K R L E Sbjct: 2 RKNILDFSYEELVDEFSKIGLEKFRVDQVWDWIYKKHEFDFDKMTNLSKEHRNTLSERFY 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I PE+++ Q S D T K+ + D +E+V + DR T C+S+QVGC +C FC+T Sbjct: 62 IYVPELLDMQISQIDKTTKFLWKLEDDNTIESVLLFHPDRVTACISTQVGCPAKCAFCAT 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 Q GF RNL EI+ Q+ K I N+V MGMGEPLLN VV ++++ Sbjct: 122 GQSGFVRNLSAGEIVSQIIAMEKHRKVN-------IGNIVYMGMGEPLLNYKEVVKSVKM 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYN 253 + G +S RR+++ST G+ + +L D+ +V LAISLHAPN+ RD IVP+NKKY+ Sbjct: 175 LNHKKGKNISMRRISISTVGIPEKIVELAQDLPEVKLAISLHAPNNYKRDIIVPMNKKYS 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 +E + + + Y + + RVT EY+++ ND + A +LAELLK +NLIP NP Sbjct: 235 VEEIIQSAKEYQKITKN---RVTFEYILIREFNDFVDDAEKLAELLKGMGAYVNLIPVNP 291 Query: 314 FP---GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 P + R + I+RF +VL + +R+ +G DIDAACGQL I K Sbjct: 292 VPSSGELKFERPHHWAIERFKEVLDKHNIENEIRREKGTDIDAACGQLRRRYITNKK 348 >UniRef50_C5CGV5 Radical SAM enzyme, Cfr family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGV5_KOSOT Length = 343 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 134/353 (37%), Positives = 196/353 (55%), Gaps = 14/353 (3%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 + LL++ ++R+ D G + +RA Q+ W+Y NF MT++ K R L Sbjct: 1 MQLLEMTLDELRKVLVDEGYEKYRASQIFDWIYKKKVLNFSNMTNLPKDFRKFLSGTFRY 60 Query: 78 RAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 +V S DGT K+ + D +E+V + D T C+S+QVGC L C FC+T Sbjct: 61 PEMTIVRRSLSKIDGTEKFLWKLHDGEFIESVILRHPDHTTFCISTQVGCQLGCIFCATG 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 GF RNL VSEI+GQV K +G +TN+V MGMGEP LN +NV ++EI+ Sbjct: 121 MSGFKRNLSVSEIVGQVIFMEKSMGKN-------VTNIVFMGMGEPFLNTDNVFKSIEIL 173 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNI 254 + G L R T+ST+G+ + +L D DV L++SLHA DE R ++PINK+YNI Sbjct: 174 HEPAGRNLGIRHFTISTAGIPEGIIRLADSGMDVRLSLSLHAATDEKRSMLMPINKRYNI 233 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + +A++ Y K+N R+TIEY+++D +ND E A QLA+L K +N+I NP Sbjct: 234 QQLMASLEYYQRKTNR---RITIEYILIDGINDSIEDAKQLAKLFKHLKIFVNIIAINPV 290 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 R S +++RF+ L +G +R +G DIDAACGQL + + Sbjct: 291 VPT-LKRPSREKVERFAIELKKHGIEAAIRTEKGSDIDAACGQLRRKNLQEER 342 >UniRef50_C9M5U8 Radical SAM enzyme, Cfr family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5U8_9BACT Length = 352 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 143/360 (39%), Positives = 208/360 (57%), Gaps = 14/360 (3%) Query: 17 KINLLDLNRQQMREFFKD-LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 +I L+L+ + ++ G K F ADQ+ +W+Y +++ MT+++K LR L E Sbjct: 4 RIQGLELSYDEWLTLIQEQFGAKKFVADQICQWIYQKKVFDWNGMTNLSKDLRAALAERV 63 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P +VE Q S+DGT K+ + D RVE+V + + T C+SSQVGC L+C FC+T Sbjct: 64 SIVPPVLVERQISADGTKKYLWELSDGARVESVLMDHGNHLTACLSSQVGCPLKCAFCAT 123 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + GF RN+ EI+G + +PI NVV MGMGEPLLN NV A+ Sbjct: 124 GRGGFERNMTAGEIVGHFLAMEADL-------GKPIGNVVFMGMGEPLLNFVNVERAIRC 176 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 +L+ G+ R VT+ST+GV + KL D + V L +SLHAPNDE+R ++PIN++Y Sbjct: 177 LLEPKMRGMGVRHVTISTAGVADGIRKLADSGLGVYLCLSLHAPNDELRSRLMPINERYP 236 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + L A++ + K+ R+T+EYV++ V D E A++L L D +NLIP+NP Sbjct: 237 LPQVLDALKYWQGKTG---VRLTVEYVLIKGVTDLPELAYELPTLFSDLQTYVNLIPYNP 293 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 + + R S SRI+ F+K+L G VR+ +G DIDAACGQL +R RKR Sbjct: 294 VIPS-FSRPSASRIEPFAKILRELGMEVEVRREKGTDIDAACGQLRAKKDRPGERETRKR 352 >UniRef50_Q1DCU1 Ribosomal RNA large subunit methyltransferase N 1 n=3 Tax=Bacteria RepID=RLMN1_MYXXD Length = 359 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 191/362 (52%), Gaps = 10/362 (2%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 D NL DL R + G P+ DQ+ +Y FDE+ + L L Sbjct: 1 MPSDTSANLYDLTRPALGALLSGWGFGPYHRDQLWTALYRRHATTFDELDGLKPELLRML 60 Query: 72 KEVAEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALEC 129 +E + E SSDG T K + + D Q +ETV + RAT+C+S+Q GCA+ C Sbjct: 61 REHTRLGQLATHHESFSSDGFTHKLLLRLDDGQTIETVLMRFKGRATVCISTQAGCAMGC 120 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T Q G +R+L EI+GQ+ +I+ A+ + NVV+MGMGEPL N + + Sbjct: 121 VFCATGQMGLSRHLTPGEIVGQILHVNRILRAS----GETLRNVVLMGMGEPLHNYEHTM 176 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPI 248 A+++++D G + R +TLST GVVP + +L + + LA+SLH D R +VP Sbjct: 177 SAVDVLVDALGLAMGPRFITLSTVGVVPGIRRLADEERPIHLAVSLHGATDAERAALVPA 236 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 +++ ++ + A R Y EK R+ E+ ++ ND EHAH L +LL+ +N+ Sbjct: 237 GRRWPLDELMDACRYYSEKRKR---RIFFEWTLISGRNDTAEHAHTLGQLLRGMDAHVNV 293 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 IP NP G G S + F VL +Y + VR+ RG DIDA CGQL V R++R Sbjct: 294 IPLNPTVGYDGGPSRPESVRAFQDVLATYDVPSTVRQRRGIDIDAGCGQLKATVERRSRR 353 Query: 369 TL 370 +L Sbjct: 354 SL 355 >UniRef50_C9KJ31 Radical SAM enzyme, Cfr family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ31_9FIRM Length = 347 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 127/350 (36%), Positives = 194/350 (55%), Gaps = 8/350 (2%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++ L ++++E + +RA Q+ +WMY F +MT+++K LR +L I Sbjct: 2 KDIFGLTVEELQEALQPFSLPKYRARQIAEWMYQRGATGFADMTNLSKKLREELSGAFVI 61 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 P+ + SSDG T K+ + D VETV + + ++CVS+Q GC + C FC++ Sbjct: 62 GRPKCKDRLDSSDGHTTKFLLEFTDGTAVETVLMRQPYGNSICVSTQAGCNMGCAFCAST 121 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G RNL EI+ Q + ++ A + VV+MG GEPL+N NV+ + ++ Sbjct: 122 LHGMARNLTTGEILSQAIVISDMLRAE--GQGEKVDTVVIMGSGEPLMNYENVLGFIRLL 179 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNI 254 +D+ GLS R +TLSTSG+VP + KL + ++L++SLHAP E+R ++PIN+KY + Sbjct: 180 HEDYVLGLSYRSITLSTSGIVPQMYKLAEEGIPISLSVSLHAPEQELRSTLMPINRKYPL 239 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + A R Y E + RVT EY+++D VNDG E A +L LL+ +NLIP NP Sbjct: 240 VDVVRAARHYAEVTKR---RVTYEYILIDRVNDGEEQARELVSLLRGQLASVNLIPINPV 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 R S +RID F L ++ VR+ G DI AACGQL ++ Sbjct: 297 AERHLLRPSAARIDWFEHYLTAHHINVTVRREMGTDIQAACGQLRNKHLE 346 >UniRef50_A8ZV25 Ribosomal RNA large subunit methyltransferase N n=9 Tax=Deltaproteobacteria RepID=RLMN_DESOH Length = 371 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 146/356 (41%), Positives = 221/356 (62%), Gaps = 10/356 (2%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + + + +L R + ++ P+RADQV KW++ + ++FD+MT+I+K +R Sbjct: 19 MNSTALPQEIQNLTRARFADWLNAHNIAPYRADQVFKWLFVHRAESFDQMTNISKPVRTL 78 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALEC 129 L E I ++ Q+S+DGT K+ + D +E+V IPE+D TLCVS+QVGCA C Sbjct: 79 LAESFIIGRLKIARTQQSADGTRKYLFELSDGEHIESVLIPEEDHFTLCVSTQVGCAQGC 138 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC TA++GF RNL +EI GQV A K + + +TN+V+MGMGEPL N +NV+ Sbjct: 139 AFCMTAKKGFVRNLTPAEITGQVLGALKTL-----APEERLTNIVLMGMGEPLANYDNVI 193 Query: 190 PAMEIMLD-DFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPI 248 +++ + D D G S RRVTLSTSG+VP + LG V LA+SL+A +++ RD ++PI Sbjct: 194 TSLDTICDGDCGLQFSTRRVTLSTSGLVPRMAPLGLATTVNLAVSLNATDNKTRDMLMPI 253 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 NK Y IE L A R Y +N+ ++T EY+++ VND + A +L +LL+ K+NL Sbjct: 254 NKTYPIEVLLEACRTYPL---SNRRKITFEYILMAGVNDSEKDALRLVKLLRSIKAKVNL 310 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 IP+N GA + R ++ I+RF ++L +T + R+++G DI AACGQLA D+ Sbjct: 311 IPFNEHEGAAFKRPDDAAIERFKQILHDRQYTVMTRQSKGADISAACGQLAADIKK 366 >UniRef50_B0TGT1 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Heliobacteriaceae RepID=RLMN_HELMI Length = 385 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 198/373 (53%), Gaps = 12/373 (3%) Query: 2 SEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMT 61 Q + PE + +L L +++ G+ FR Q+ KW+ + EMT Sbjct: 17 ERQRIEPEGEEQSEQPTDLRGLFPEEIAALLTPWGQPTFRGKQIFKWLQNRAVREVAEMT 76 Query: 62 DINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPED-----DRA 115 D+ + LR +L E ++ + + DGT K+ + D +E+V +P DR Sbjct: 77 DLPQALRVRLGEAGWLKPLAPERHRVARDGTEKYLWRLADGELIESVLMPYRRAQTRDRV 136 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 T+C+S+Q GC L C+FC+T +QGF RNL +EI+GQV +TN+V Sbjct: 137 TVCLSTQAGCPLSCRFCATGRQGFRRNLTAAEIVGQVLDITHEKRKDDPDF--KVTNLVF 194 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISL 234 MGMGEP LN +NV A+ + G + +RR+T+ST+G+VP +D+ D +V LA+SL Sbjct: 195 MGMGEPFLNYDNVRRAIGLFTHPEGQAIGQRRITVSTAGIVPGIDRFADEDWEVNLALSL 254 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 HA +D+ R E +P+N ++ + L A RRY EK+ R+++EY ++ VND E A + Sbjct: 255 HAADDKQRSEWMPVNDRFPLAQVLEACRRYWEKTRR---RLSVEYALMAGVNDRLEDARR 311 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 LA L K P +NLIP N G R +RF L +G ++R+ RG DI+AA Sbjct: 312 LASLFKGWPIHLNLIPVNAVAGIGVRRPEREPTERFLAELRRWGVDAVIREERGQDIEAA 371 Query: 355 CGQLAGDVIDRTK 367 CGQL G + Sbjct: 372 CGQLRGAAKGEEE 384 >UniRef50_Q6MDD0 Ribosomal RNA large subunit methyltransferase N 2 n=2 Tax=Parachlamydiaceae RepID=RLMN2_PARUW Length = 358 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 136/352 (38%), Positives = 204/352 (57%), Gaps = 10/352 (2%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++ D + Q++ E+ K GEK F A Q++ W+Y ++D+M+++++ LR KL + + Sbjct: 1 MDYADFDHQKLVEWLKAHGEKEFHAKQILSWIYQKGVLSWDKMSNLSQSLREKLAKHIRL 60 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 E+V S D TIK+ + D VE+V I R T+CVSSQVGC +C FC++ Sbjct: 61 PVLELVRYTESIDQETIKFLWRLRDGNLVESVLILSGIRRTVCVSSQVGCPAKCAFCASG 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 QQGF RNLR +EII Q+ + + + +++VV MGMGEPL N +VV ++ ++ Sbjct: 121 QQGFFRNLRPTEIIEQILQINAWL----SSKGEKVSHVVYMGMGEPLKNYESVVASIRVL 176 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 +S+RR+T+ST GVV + +L + + V L +SLHAPN IR +I+P +KY + Sbjct: 177 SHPDFCNISQRRITVSTVGVVEGIKRLSKEGLKVNLVLSLHAPNQHIRKKIIPYARKYPL 236 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L ++ Y +K+ + +T EY +L +ND +HAH+LA LLK C +NLIP+NP Sbjct: 237 EEILESMDEYAQKTKRD---ITFEYTLLAGINDHPDHAHELAHLLKGKQCTVNLIPYNPI 293 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 PG R I +F VL R T+GDDI AACGQLA + Sbjct: 294 PGLRLKRPEKKAIKQFRSVLYGSHIVNTCRYTKGDDIGAACGQLALQEREGQ 345 >UniRef50_Q1Q215 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q215_9BACT Length = 368 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 125/370 (33%), Positives = 198/370 (53%), Gaps = 18/370 (4%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 K ++ +L+ + E + LGE +R Q++ WMY +F++M+DI R KL Sbjct: 1 MNKLQLTSITELDLSESVELCRSLGEPSYRGKQILSWMYKKGATDFNQMSDIPLPFREKL 60 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 +E + ++ S DGT K+ I + D +E V + + R T CVS+QVGCA+ C Sbjct: 61 EEAHNVFQTKIHTINTSQDGTEKFLIHLPDNNLIECVLLRDGKRRTACVSTQVGCAMGCS 120 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC++ G RNL+ EII QV + ITN+V MG+GEPL N + VV Sbjct: 121 FCASGVLGLTRNLKTGEIIEQVLHIKNHL-----PANEHITNIVFMGIGEPLANYDKVVK 175 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPIN 249 ++ IM D+G + R +T+ST G++ + +L + + V LAISLHA ND R+++VP N Sbjct: 176 SLRIMNADWGLAIGARNITISTVGLIEGIRRLAKEGLKVNLAISLHASNDNTRNKLVPSN 235 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 K I+ L A + Y ++ + ++ EY M+D +ND + A LA++LK C +N++ Sbjct: 236 SKTGIKNILGAAQEYFNATHRD---ISFEYTMIDGINDSKQDAKLLAQILKGVQCNVNIL 292 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 P NP + ++ F VL ++G VR+ +G +++AACGQL Sbjct: 293 PVNPIKEGNFAPPVQKTVETFCTVLKNHGIVATVRQRKGINVNAACGQLR--------LQ 344 Query: 370 LRKRMQGEAI 379 ++K GE I Sbjct: 345 IQKHCHGEKI 354 >UniRef50_D2RNU4 Radical SAM enzyme, Cfr family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RNU4_ACIFE Length = 353 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 203/356 (57%), Gaps = 12/356 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L ++++ LG K FRA+QV +W+Y +F +M++++K R +L + Sbjct: 3 KKEIMGLTLEELQTELAGLGMKKFRAEQVFRWLYEKAATDFSQMSNLSKDARQQLADRYT 62 Query: 77 IRA--PEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFC 132 I +V++E RS DG T K + + D VETV + D ++C+SSQVGCA+ C FC Sbjct: 63 IATAQVKVLKEYRSRDGLTHKVLLELTDGATVETVLMHHDYGYSVCLSSQVGCAMNCAFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL +EI+ Q++ + G ++ +V+MG GEP+LNL+NV+ A+ Sbjct: 123 ASGLHGFVRNLTAAEILAQLYFFQSGL----QPGGERVSRIVVMGSGEPMLNLDNVLKAL 178 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKK 251 +I+ D G + R +T+ST GVVP + +L ++ LAISLH + E+R+ ++PIN+K Sbjct: 179 DILHSDRGQCIGYRNMTVSTCGVVPGIQELTAQGRNINLAISLHGASQELRNRLMPINRK 238 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + A Y + + +V EY++L +ND E A LA+ L+ C INLIP Sbjct: 239 YPFPEVIQAADAYEKSNGR---QVMYEYILLAGINDRPEDARNLADALEHKECVINLIPA 295 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 NP P + R S+ +DRF ++L VRK G DI+AACGQL + + Sbjct: 296 NPVPEKGFERPSDRAVDRFFQMLKKRRLNVTVRKEMGKDINAACGQLRASALKEAQ 351 >UniRef50_Q3AC22 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RLMN_CARHZ Length = 342 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 126/348 (36%), Positives = 205/348 (58%), Gaps = 13/348 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 LDLN +++ + K+ EK FR Q+ +W++ + +F++MT++ LR KLKE + + Sbjct: 4 FLDLNSEEIVAWLKENNEKSFRLKQINEWIFKHGELDFNKMTNLPVRLREKLKENFLLPS 63 Query: 80 PEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 +++ ++S DG +IK+ + + D +E V + T+C+S+QVGC + CKFC+T Sbjct: 64 LKIIHSKKSRDGQSIKYLLKLKDNLGIEAVLLKYRYGNTVCLSTQVGCKMGCKFCATGLG 123 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF+RNL E+I Q+ K + IT VV+MG GEPL N V+ M + + Sbjct: 124 GFSRNLTAGEMIEQILVL-------KASSSEKITRVVLMGSGEPLDNFTEVLKFMRKINE 176 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 +S R++T+ST G+VP + L + + V LAISLHAP+D +R+E++PINK++ + Sbjct: 177 KDCLNISYRKITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAE 236 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A +++K+ RV+ EY ++++VND EHA +LA+LL+ +NLIP+N Sbjct: 237 LLDAAWYFIDKTGR---RVSFEYALIENVNDTVEHALKLAQLLQRKLVHVNLIPYNTIEK 293 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 + S +I++F +VL G VR+ GD+ID ACGQL + Sbjct: 294 RNFKTPSVEKINKFKEVLKRAGIPVTVRRELGDEIDGACGQLKAKYFE 341 >UniRef50_B9E1E5 Putative uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E1E5_CLOK1 Length = 362 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 126/360 (35%), Positives = 204/360 (56%), Gaps = 15/360 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+L+ N +++ + K E FRA Q+M W+Y +F+ MT+I+K + KLK+ I Sbjct: 6 NILNFNIEELENWMKVNDESKFRASQIMDWIYKKNQYDFNYMTNISKNVIEKLKKNFYIG 65 Query: 79 APEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 PE++E+Q+S T K+ D+ + ETV + ++CVS+QVGC + CKFC++ Sbjct: 66 IPELIEKQKSKSQDTFKFLYKFQDKNIIETVVMKYRHGNSICVSTQVGCRMGCKFCASTV 125 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL EI+ Q+ ++ I+N+V+MG GEPL N +NV+ + ++ Sbjct: 126 NGMVRNLTSGEILAQIL-------KSQTEINERISNIVLMGSGEPLDNYDNVLKFLNMVN 178 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 + + +R +TLST G+VP + L + + + LAISLH+P++ R +++PI KY+IE Sbjct: 179 SKYSLNIGQRHITLSTCGIVPKIMDLANENLQITLAISLHSPDNFSRRDMMPIANKYSIE 238 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + A + Y+ K+ RV+ EY ++ VND E A +L +LLK C +NLIP N Sbjct: 239 EIIYACKYYINKTGR---RVSFEYALVKGVNDSLEFAERLVQLLKGLLCHVNLIPVNEVK 295 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQ 375 + +SS I +F L+ T +R+ G DIDAACGQL ++ ++ RK ++ Sbjct: 296 ENDFKKSSEDNIKKFYNKLIENKIETTIRREMGSDIDAACGQLRRRYLE--SKSYRKGVE 353 >UniRef50_C0WD85 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD85_9FIRM Length = 352 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 131/357 (36%), Positives = 198/357 (55%), Gaps = 12/357 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K +L L +QM++ F LG K FRA+QV +W+Y F+EMT+++K R L+ Sbjct: 2 TKKEILGLTLEQMQDEFLALGLKKFRAEQVFRWIYEKGATTFEEMTNLSKENRSLLEGTY 61 Query: 76 EI--RAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKF 131 I A +V+ S+D T K + + D VETV + D + C+SSQVGCA+ C F Sbjct: 62 SILSGAVKVLRTYDSADRLTHKVLLGLSDGASVETVLMHHDYGYSACLSSQVGCAMNCTF 121 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C++ GF RNL EI+ Q++ ++ + ++ +V+MG GEP+LNL+NV+ A Sbjct: 122 CASGLHGFMRNLTAGEILAQLYYFDHVL----LPKGERVSRIVIMGSGEPMLNLDNVLAA 177 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINK 250 +++M D G +S R +T+ST G+VP ++++ + LA+SLHA +RD ++PIN Sbjct: 178 LDLMHHDKGQCISYRNMTISTCGIVPGIEEMTRQGRTINLAVSLHAATGALRDRLMPING 237 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 KY + A RY + + +V EY++L +ND E A LAE L C +NLIP Sbjct: 238 KYPFPEVIDAASRYEKMNGR---QVMYEYILLAGINDREEDARALAEALSGKECVVNLIP 294 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 NP P + R + +DRF + L VRK G DI+AACGQL + + Sbjct: 295 ANPVPEKGFRRPEDRDVDRFFQYLKKRHINVTVRKEMGKDINAACGQLRASQLKEEQ 351 >UniRef50_A5UT23 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Roseiflexus RepID=RLMN_ROSS1 Length = 399 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 130/394 (32%), Positives = 190/394 (48%), Gaps = 47/394 (11%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + +D NL DL+ +M G+ +RA Q+ + +Y D+ MTD+ LR + Sbjct: 1 MMNQDTLPNLYDLSLAEMERLMTAWGQPAYRARQIFRQLYVNLVDSPLAMTDLPLALRER 60 Query: 71 LKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALE 128 L + + + G T K + + +E+V + DRAT+CVS+Q GC + Sbjct: 61 LVAETRLAPLAPEQVHVADQGLTRKALFRLENGVLIESVLMIYPDRATVCVSTQAGCGMG 120 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG---------------------- 166 C FC+T G RNL +I+ QV AA+ + Sbjct: 121 CVFCATGTLGLLRNLSPGDIVAQVVWAAREMRRFAAERCISPSLAPPDDDSWWTPDTLED 180 Query: 167 ----------QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV 216 ++N+V MGMGEP N + A+EI+ D G + R +T+ST G++ Sbjct: 181 QGSSEARSISVSRLSNIVFMGMGEPFANYDRWWRAVEILHDPRGLNMGARSMTVSTVGLI 240 Query: 217 PALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRV 275 P + +L + + + LAISLHAP+D +R ++P+N++Y + L A R YL + RV Sbjct: 241 PGIRRLATETLPINLAISLHAPDDALRSALMPVNRRYPLAALLEATRDYLAATGR---RV 297 Query: 276 TIEYVMLDHVNDGTEHAHQLAELLKDT---------PCKINLIPWNPFPGAPYGRSSNSR 326 + EYV+L ND EHA +LA LL +NLIPWNP PG P GRS R Sbjct: 298 SFEYVLLQGKNDEPEHAAKLAALLHGEAGTTPLPLHLVHVNLIPWNPVPGMPLGRSERRR 357 Query: 327 IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 + F ++L G VR RG I AACGQLAG Sbjct: 358 VLTFQRILRERGIACTVRVERGVSIAAACGQLAG 391 >UniRef50_A4XL78 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Clostridia RepID=RLMN_CALS8 Length = 344 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 202/354 (57%), Gaps = 13/354 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K + D +++++ ++ GEKPFRA+Q+ +W+Y + + T+I LR +++E Sbjct: 2 KRLIKDFTFDELKKWVEETGEKPFRANQIFEWLYKKNATDVNSFTNIPTQLRKRIEEEFI 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + VV+ S +IK+ + + D +E+V++P +C+S+QVGC ++C FC++ Sbjct: 62 LNSLRVVK-YESDGESIKFLLELVDGNAIESVFLPYKYGNAICISTQVGCRMKCAFCAST 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G RNL E++ Q+ I + I+NVV+MG GEP N+ NV ++I+ Sbjct: 121 IGGMIRNLSAGEMVDQIVNIENITK-------KKISNVVLMGSGEPFDNIENVFKFIDII 173 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNI 254 G + R +T+ST G+V + KL + V LAISLHAPN+ +R+++VP+N+KY+I Sbjct: 174 NSKEGKNIGARHITISTVGIVDGIYKLSEYPKQVNLAISLHAPNNNLRNKLVPMNRKYSI 233 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E L AV Y+ K+N RVT EY ++D VND E A++LA++L +NLIP NP Sbjct: 234 EDILKAVDYYISKTNR---RVTFEYALIDGVNDSIECANELAKILSGKLVHVNLIPVNPV 290 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 G + + R+ F VL+ G +R+ G I AACGQL + +++ Sbjct: 291 NGRNFKKPPKERVKEFYNVLILSGIQVTIRRELGSSIAAACGQLRSRHYNISEK 344 >UniRef50_Q72HC1 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Deinococci RepID=RLMN_THET2 Length = 355 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 140/356 (39%), Positives = 199/356 (55%), Gaps = 16/356 (4%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + +L+L +++ GE +R Q+ W+Y +F EMTD+ K LR Sbjct: 1 MAASHALKPILELLPEELP------GEG-YRRAQIAHWLYAKGARDFSEMTDLPKALREA 53 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALEC 129 L + +V+ S DG++K+ + D ++ E VY+P ++R T+C+S+ VGC C Sbjct: 54 LAREWRLSEFSLVQAFPSQDGSVKYLFTLLDGKKTEAVYMPYENRKTVCLSTMVGCPAGC 113 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T GF RNL +EI+ Q+ A G + R I NVV+MGMGEPLLNL NV+ Sbjct: 114 TFCATGALGFGRNLTAAEILDQLLTIAYHQGLSP----REIRNVVLMGMGEPLLNLRNVL 169 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPI 248 A+ IML LS RRVTLST G+ + +L + + V LA+SLHAP+DE R +I+P Sbjct: 170 KAVRIMLHKKALALSPRRVTLSTVGIPKGIYRLAEEDLGVRLALSLHAPDDETRRKIIPT 229 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 +Y I + AVR Y K+ RVT EY +L VND A LA+LLK +NL Sbjct: 230 AHRYPIAEIMEAVRHYHAKTKR---RVTFEYTLLKGVNDHLWQARLLAKLLKGLSAHVNL 286 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 IP+NP+ GAP + + + F++ L G T +R +RG D+ AACGQLA V Sbjct: 287 IPFNPWEGAPVAGTPKAGVLAFAEELKRLGVPTSIRWSRGQDVGAACGQLALKVPR 342 >UniRef50_A5D1B6 Ribosomal RNA large subunit methyltransferase N n=13 Tax=Clostridia RepID=RLMN_PELTS Length = 368 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 129/364 (35%), Positives = 199/364 (54%), Gaps = 14/364 (3%) Query: 9 ENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 E +IN+ DL + +G + +RA QV W++ ++F EMT++ LR Sbjct: 10 EGSPVVGDRINVKDLTLAGLERLLTGMGAERYRAGQVAIWVFQKGAESFREMTNLPANLR 69 Query: 69 GKLKEVAEIRAPEVVEEQRS-SDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCA 126 KL A I PE++ ++ S +K+ + D + VE+V++ ++CVS+Q GC Sbjct: 70 EKLDAAAVISRPEILAKKVSSKKDAVKYLFGLPDGQAVESVFMKHAYGNSVCVSTQAGCR 129 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC++A G RNL EI QV + I++VV+MG GEPL N + Sbjct: 130 MGCRFCASALGGLTRNLSPGEIYDQVLGIRR-------DTGERISSVVLMGSGEPLDNYD 182 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEI 245 + ++ + +G + R +T+ST G+VP + +L + + + LA+SLHAPND +RD + Sbjct: 183 ATLTFIKNVTAPYGLHIGCRHITVSTCGLVPGIRRLAREKLALTLAVSLHAPNDRLRDIL 242 Query: 246 VPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD-TPC 304 VP+N+KY + +AA R Y +++ RVT EY +L VND EHA +L LLK PC Sbjct: 243 VPVNRKYPLTELMAACRDYAQETGR---RVTFEYALLAGVNDRKEHAEELVRLLKGKMPC 299 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP NP P S +++ F K+L +G VR+ G DIDAACGQL + Sbjct: 300 HVNLIPANPVPERGVKTPSRLQVELFKKILERHGLAVTVRRGLGADIDAACGQLRRKIAV 359 Query: 365 RTKR 368 +R Sbjct: 360 MGER 363 >UniRef50_B2A2K6 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RLMN_NATTJ Length = 351 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 133/357 (37%), Positives = 197/357 (55%), Gaps = 15/357 (4%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + K +L DL +++E+F G + FRA Q+ WMY D+ + M++I K LR +L E Sbjct: 3 NHKQSLKDLTLNELQEYFSRKGWQQFRAKQIFDWMYIQQVDSIEVMSNIPKKLRQELMEN 62 Query: 75 AEIRAPEVVE---EQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 I E+ +DGTIK+ + D VET + D T+C+SSQ GC + C Sbjct: 63 CTINDLELDSNNIYTSPTDGTIKFLSVLKDGIGVETTIMKYDYGNTVCISSQAGCNMNCV 122 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC++ G R+L E+I QV A K++ G I N+V+MG GEPL N +++ Sbjct: 123 FCASTTGGKERDLSPGEMIDQVLMANKVL-----PGSESINNIVVMGSGEPLENYQHLIK 177 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPIN 249 ++I+ D G + R +T+ST G+VP + L + + + LAISLHAPNDE+R++++P+N Sbjct: 178 FLKIVNDGKGLNIGMRHITVSTCGLVPEIYNLAEEELQLNLAISLHAPNDELRNKLIPLN 237 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--DTPCKIN 307 K Y I L A + Y +K+ R+T EYV++ ND + A +L+E L P +N Sbjct: 238 KIYPIHELLEACQVYFQKTGR---RITFEYVLIKDFNDSIDLAKELSETLTALKMPVHVN 294 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 LIP+NP + +SRI F L S VRK RG D+D ACGQL V+ Sbjct: 295 LIPFNPVEETKFTAPPSSRISDFKNNLQSNNIGVTVRKERGVDVDGACGQLRSKVMR 351 >UniRef50_C7NA88 Radical SAM enzyme, Cfr family n=5 Tax=Fusobacteriaceae RepID=C7NA88_LEPBD Length = 372 Score = 399 bits (1025), Expect = e-110, Method: Composition-based stats. Identities = 128/361 (35%), Positives = 203/361 (56%), Gaps = 10/361 (2%) Query: 13 TKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 KI++L ++ + ++ F ++ K F A QV W+++ NFDE ++I+K R LK Sbjct: 18 DTVEKIDILGMDLESLQRKFVEIRLKKFNASQVFDWLHNKLVFNFDEFSNISKKDREILK 77 Query: 73 EVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 E + E Q S DG T K+ + D+R +E+V I +R TLCVSSQ+GC + C Sbjct: 78 EKFYVEKLEFKTHQVSEDGDTEKFLFELKDKRLIESVLISHKNRHTLCVSSQIGCLIGCD 137 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+TA + RNL +SEI+ Q + K + + + NVV MGMGEP LN + V+ Sbjct: 138 FCATATMTYERNLSISEILLQYYYVQKHL----LQRGEKLGNVVYMGMGEPFLNYDAVLG 193 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPIN 249 ++ ++ G SKR T+STSG+V + + + + LAISLH+ D++R+EI+PIN Sbjct: 194 SINMLNSPKGQNFSKRNFTISTSGIVNGIKRFTENENQINLAISLHSVKDDVRNEIMPIN 253 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 K++ ++ ++ Y +++ R+T EY++++ +N E A +LA L C +NLI Sbjct: 254 KRWGVKQLKESLLEYQKQTKN---RITFEYILINDLNCEPEDARELAGFLNSFSCLVNLI 310 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 P+NP G PY S + F K+L +R+T+G DI AACGQL T ++ Sbjct: 311 PYNPVGGKPYKTPSKQKQREFYKLLKDKNVNVTLRETKGQDIAAACGQLKAKKEMNTSQS 370 Query: 370 L 370 + Sbjct: 371 I 371 >UniRef50_Q2S0P9 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Rhodothermaceae RepID=RLMN_SALRD Length = 369 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 219/375 (58%), Gaps = 16/375 (4%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M + V T + +++L + R +++F + G +R DQ+ W+Y +FD M Sbjct: 1 MPDVKTASHTVGTAEDRVDLKTMGRAGLKDFVAEHGAPRYRGDQLFNWVYGKGVSDFDRM 60 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIPEDD------ 113 +++ K +R L+ A + E+VE+Q+++D T+K + + ETV IP D Sbjct: 61 SNLPKRMRRGLQRDATVEDIEIVEQQQAADRTVKALFELPSGREAETVLIPAIDERGEAR 120 Query: 114 RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNV 173 R T+CVSS+VGCA+ C+FC+T + GF NL I QVW ++ A+ RP+TN+ Sbjct: 121 RLTVCVSSEVGCAMGCEFCATGRMGFRENLTPGAIFDQVWHMNEV---AQEHFGRPVTNI 177 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAI 232 V MGMGEPLLN + V+ ++ I+ D+ LS +++T+ST G+ + L D + LA+ Sbjct: 178 VFMGMGEPLLNYDAVLDSISILTDEDSLNLSAQKITVSTVGLARRIKDLADDQLRTNLAV 237 Query: 233 SLHAPNDEIRDEIVPINK--KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 SLHAP++E R I+P+N+ K ++ A++ Y +K+ ++T EY + VND Sbjct: 238 SLHAPDNETRSRIMPVNEAEKTSLPALKEALQYYFDKTGR---QITYEYCLFKGVNDSET 294 Query: 291 HAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 A LA++ + P K+NL+ +NP G + R+S +++DRF +VL+ G T VR++RG D Sbjct: 295 DARNLADVTRWAPSKVNLLMYNPVEGLNFERTSEAQLDRFVQVLVQEGVTVTVRRSRGQD 354 Query: 351 IDAACGQLAGDVIDR 365 IDAACGQLA + D Sbjct: 355 IDAACGQLANEGEDA 369 >UniRef50_C1A949 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RLMN_GEMAT Length = 360 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 145/367 (39%), Positives = 202/367 (55%), Gaps = 20/367 (5%) Query: 18 INLLDLNRQQ----MREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 +LLD + + E+ GE +RA QV ++ +FDEMT++ K LR L Sbjct: 5 PDLLDFDPDAALALLGEWMAARGEPAYRAAQVFGRLWQRPVRSFDEMTELPKALREGLAG 64 Query: 74 VAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFC 132 I A E+ Q+S DGT K+ + D Q +ETV IP+ DR T C+SSQ GCAL+C FC Sbjct: 65 SFRITALELTTRQKSMDGTEKFLFRMHDGQLIETVAIPDGDRLTFCISSQAGCALQCAFC 124 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T GF RNL SEI GQV + + TN+V MGMGEPL+N V P + Sbjct: 125 ATGAMGFQRNLHPSEIAGQVRELRMLTPSIVP------TNIVFMGMGEPLMNWKAVSPTL 178 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKK 251 ++ D G+ R +T+ST GV+P + L LAIS+HAP+D +R ++P+N K Sbjct: 179 SLLNDPRALGIGARHITISTVGVLPGIVALAARPEQFRLAISIHAPSDALRRTLMPVNTK 238 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + +AA R + RVT EYVML VND EHA QLA+L +D +NLIP Sbjct: 239 YPLADVIAAAREF-------DRRVTFEYVMLGGVNDQPEHAAQLAQLARDCRAFVNLIPL 291 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 +P + S+ I+ F+K + + G T VR++RG DI AACGQL + + R + + Sbjct: 292 HPGGSMGFSPSTTPTINAFAKAIRARGVETAVRRSRGLDIAAACGQLRTERLGR-RLPVA 350 Query: 372 KRMQGEA 378 + GE Sbjct: 351 AQDHGEV 357 >UniRef50_B9XSY7 Radical SAM enzyme, Cfr family n=1 Tax=bacterium Ellin514 RepID=B9XSY7_9BACT Length = 378 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 129/373 (34%), Positives = 203/373 (54%), Gaps = 28/373 (7%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++ ++++ FK+L + +R Q+++W+Y + ++D MT++ K LR L++ + Sbjct: 3 TDIKSYTSEELQARFKELNQPGYRVGQLLEWLYVHRVASWDAMTNLPKGLREVLQKEFTL 62 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPED--------DRATLCVSSQVGCALE 128 + E+V Q S D T K+ + D +E+V IP + DR TLCVS+QVGCA Sbjct: 63 QTLELVRRQGSRDTTQKFLWKLNDGAMIESVLIPANPALYGEASDRHTLCVSTQVGCAYG 122 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP---------------ITNV 173 CKFC++ +G+ RNLRV EI+ Q+ + A + G +P I N+ Sbjct: 123 CKFCASGLEGWKRNLRVEEIVEQILAIERWNAAEEAKGSKPPEANPKPKTTEVTRFINNL 182 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAI 232 V+MGMGEPL N N++ A+ I+ +G G+ R++T+STSG+ P + KL D LAI Sbjct: 183 VIMGMGEPLANYENLLKALRILNAPWGGGIGARKITISTSGLAPQIRKLADDPLQFRLAI 242 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 SLH DE+R++I+P+NKKY ++ AA Y +K +T EY+++ VNDG + Sbjct: 243 SLHGATDEVRNKIMPVNKKYPLKELTAACEYYQQK---KDRMITFEYILIAGVNDGLDQV 299 Query: 293 HQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDID 352 LA+L K+NLIP+N + R + + + F L +R+ +G DID Sbjct: 300 KPLAQLAHRLNAKVNLIPYNKVEDLTWERPTEAAQEAFLATLEKERVVATLRREKGHDID 359 Query: 353 AACGQLAGDVIDR 365 AACGQL Sbjct: 360 AACGQLRLKTERE 372 >UniRef50_Q0AXL8 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RLMN_SYNWW Length = 357 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 141/360 (39%), Positives = 210/360 (58%), Gaps = 10/360 (2%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 K LL L+ QM EF L E FR QV KW+Y C +F EM+D+ + LR KL Sbjct: 1 MNSIEKKQLLGLDLNQMEEFLLGLEEPRFRGRQVYKWIYQKECSSFYEMSDLPRSLRKKL 60 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIP----EDDRATLCVSSQVGCA 126 E A + P V++++ DG+ K+ + + D++ +E V +P + TLC+S+QVGC Sbjct: 61 DEKARVSIPRVLKQRVGKDGSRKFLMELDDKKKIECVLLPQSRDKKSSYTLCLSTQVGCP 120 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVW-RAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 + C FC+T Q GF RNL+ EIIGQ ++ K I+NVV MGMGEPLLN Sbjct: 121 IACSFCATGQSGFQRNLKAFEIIGQYLGSKKELSKRLKSPRAELISNVVYMGMGEPLLNY 180 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDE 244 + V+ ++ ++ D G L +RR+T+STSG V + KL + I + LAISLHA ++ +RD+ Sbjct: 181 DEVIKSVHMLNDPRGINLGQRRITISTSGEVAGIKKLAQENIQLTLAISLHACDNSLRDQ 240 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P+N+KY +E A+ Y+ + RVT EY++LD VN A+++ +LLK Sbjct: 241 LIPLNRKYPLEVLFPAIEDYIAFTGR---RVTFEYLLLDEVNMSRNDANKMVKLLKPLLA 297 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP+N G P+ + ++I +F + L G +R+ RG DI+AACGQL D Sbjct: 298 NLNLIPYNEIEGLPFKKPETAKIWQFYQWLQDGGLNVSIREERGSDINAACGQLRSDYRR 357 >UniRef50_Q7X370 Putative uncharacterized protein n=2 Tax=uncultured Acidobacteria bacterium RepID=Q7X370_9BACT Length = 413 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 141/370 (38%), Positives = 216/370 (58%), Gaps = 21/370 (5%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + + + ++ + R ++ + LG F A Q+ +W+Y +F M+D+ + LR + Sbjct: 42 IMSNHTRTDIAESERHELEHTLERLGHPRFHARQIFQWVYKRGITDFALMSDLGRDLRAQ 101 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----------RATLC 118 L E I P V ++RS DGT+K+ + + D R +E+V+IP++ R T C Sbjct: 102 LAESCVITTPVVERQERSQDGTVKFLLRLADGRHIESVFIPDETPAGPDGSPRAARITFC 161 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 VS+QVGCA++C FC T + G +R+L EI GQV A+ +G + N+V+MGM Sbjct: 162 VSTQVGCAMKCAFCLTGKMGIDRSLTAGEIAGQVRVLARELGFLETRF-----NIVLMGM 216 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAP 237 GEPL N + A+ ++ D+ GF +S RR+TLST GV+PAL++L + + LAISLHA Sbjct: 217 GEPLHNYEETMKALRVLADEHGFAMSARRMTLSTVGVLPALERLATEPLMPNLAISLHAT 276 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 ++ RD +VPIN+KY ++ L A RR+ K R+T EYV+L VND E A +L + Sbjct: 277 TEDQRDLLVPINRKYGLKELLDACRRFPLKRRE---RITFEYVLLREVNDTPEDARRLVK 333 Query: 298 LLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQ 357 LL K+NL+P N G P+ R S+ R++ F+++L +G VRK+RG DI AACGQ Sbjct: 334 LLHGIKGKVNLLPLNEAAGIPFERPSDDRVNSFARILADHGIPVSVRKSRGRDIRAACGQ 393 Query: 358 LAGDVIDRTK 367 L + + Sbjct: 394 LITESDRKAP 403 >UniRef50_D2R822 Radical SAM enzyme, Cfr family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R822_9PLAN Length = 391 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 134/338 (39%), Positives = 199/338 (58%), Gaps = 10/338 (2%) Query: 27 QMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQ 86 +++ + + G +RA QV KW++ +FDEMTD+ K LR +L + +VV + Sbjct: 45 ELKTWLTERGYPAYRATQVRKWVFELGASSFDEMTDLPKKLRDELAPEFTLWTGKVVTKS 104 Query: 87 RSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRV 145 S DGT K + R+E V + + DR ++CVSSQVGCA+ C FC++ G +RNL Sbjct: 105 ESPDGTEKLLVEYPGGGRIECVLLRDGDRRSICVSSQVGCAMGCVFCASGLDGVDRNLTA 164 Query: 146 SEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK 205 EI+ Q+ +++ + ++++VMMGMGEPL N+++V+ A+ + G G+S Sbjct: 165 GEIVEQMLLLQRLL-----PEKERLSHIVMMGMGEPLANIDHVLEALGEATREDGLGISP 219 Query: 206 RRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRY 264 RR+T+ST G+ ALDKL + LA+SLHAPN+E+R +VPINK IE + + RY Sbjct: 220 RRITISTVGLPAALDKLCNLEAKYHLAVSLHAPNNELRTRLVPINKAIGIEKVIESADRY 279 Query: 265 LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSN 324 E S R+T EYV+L VND +HA +LAELL +N+IP+NP G PY S Sbjct: 280 FETSGR---RLTFEYVLLAGVNDHPDHAQELAELLAGRTAMLNVIPYNPVAGLPYKTPSG 336 Query: 325 SRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 + I RF +L+ G R+ +G +I+AACGQL Sbjct: 337 NAIHRFRNILVDAGINVKFRQRKGSEINAACGQLRRST 374 >UniRef50_Q6MPV7 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Bdellovibrio bacteriovorus RepID=RLMN_BDEBA Length = 399 Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 209/358 (58%), Gaps = 10/358 (2%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 ++ +N L + ++ + K G++ FRA Q+ KW+Y + ++MT+++K R Sbjct: 20 AKPLENQPVNFYSLTLEDLKAYIKSKGKEQFRAQQIFKWVYEQRVTDPEQMTNLSKEFRQ 79 Query: 70 KLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALE 128 L + P V++ +S DGT K+ + D VE V IP +DR TLC+SS+VGC + Sbjct: 80 DLPSMLSFDLPPVLQHLKSVDGTQKFLFDMKDGMSVEAVVIPSEDRLTLCISSEVGCNMA 139 Query: 129 CKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNV 188 CKFC T +Q R LR +I+GQ + ++ + ITN+V MGMGEPL N V Sbjct: 140 CKFCFTGKQKLKRRLRTEDIVGQFMQV-----HDRLAEGQRITNIVFMGMGEPLDNPEAV 194 Query: 189 VPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPI 248 ++++ +G LS++++T+STSG+VP + ++ D V LA+SL+ PNDEIR +++PI Sbjct: 195 FKTIDVIHSPWGINLSRKKITVSTSGIVPEMWRVADA-KVRLAVSLNGPNDEIRSQVMPI 253 Query: 249 NKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINL 308 NK+++ + L A + + S ++T EYV+L + D EHA QL +L+KD PCKIN+ Sbjct: 254 NKRWDTKALLEACKEHYRVSKD---KITFEYVLLKGITDQLEHARQLVKLVKDVPCKINI 310 Query: 309 IPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 IP+N PG+ Y R + I F LM+ G ++R++ G DI AACGQL Sbjct: 311 IPFNEHPGSGYERPDDDTIQAFHTELMNLGAHVLLRRSMGRDIFAACGQLTTVKERPQ 368 >UniRef50_A7ZGB0 Ribosomal RNA large subunit methyltransferase N n=41 Tax=Epsilonproteobacteria RepID=RLMN_CAMC1 Length = 381 Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 138/367 (37%), Positives = 208/367 (56%), Gaps = 26/367 (7%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 NLLDL+ ++++E FRA Q+ +W+Y F +M ++ K +R L E + Sbjct: 2 KNLLDLSIEELKELVS----PSFRATQIYEWVYKKNATEFSQMLNLPKDMRQDLAEKFYL 57 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDD-------------RATLCVSSQV 123 + V+ ++SSDG+IK+ + D ++E+V +P + R T+CVSSQV Sbjct: 58 DPLKCVKFEQSSDGSIKYLFELKDGLKIESVLLPMKEEISDEDGKISRHARYTICVSSQV 117 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GC + C FC TA+ G RNL EI+GQ+ + K+ +R I NVV MGMGEPL Sbjct: 118 GCKMGCAFCLTAKGGLVRNLTAGEIVGQILWIKR---ENKIPYERRI-NVVYMGMGEPLD 173 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIR 242 NL NV A++I+ + G +S RR T+STSG+ + KLG+ + V LAISLHA +E+R Sbjct: 174 NLTNVSKAIKILALNEGLAISPRRQTVSTSGLGSQIKKLGEMDLGVLLAISLHAVTNELR 233 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 ++PINK YNIE + AVR + + RV EY+++ +ND A +L +LL Sbjct: 234 SRLMPINKAYNIEAVMDAVRGFP---IDMRKRVMFEYLVIKDLNDSVSDAKKLVKLLHGI 290 Query: 303 PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 K+NLI +NP G+ +GR + + +F + L +G T +R+++G DI AACGQL Sbjct: 291 KAKVNLIYFNPHEGSEFGRPELASMLKFQEYLRDHGVTCTIRQSKGLDISAACGQLKQRN 350 Query: 363 IDRTKRT 369 + R Sbjct: 351 ENPKFRA 357 >UniRef50_B2A0B9 Ribosomal RNA large subunit methyltransferase N 3 n=6 Tax=Verrucomicrobia RepID=RLMN3_OPITP Length = 374 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 124/367 (33%), Positives = 200/367 (54%), Gaps = 16/367 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 K L + + ++ GE FRA Q++ W+Y ++D MT++ K LR L + Sbjct: 4 TPAKPPLTGETLESLTARLRERGEPAFRASQILDWVYKKRARSWDGMTNLPKPLRTWLDD 63 Query: 74 VAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIP--------EDDRATLCVSSQVG 124 ++ +V ++S+D T K + + D +ETV I + R T+C+S+QVG Sbjct: 64 TFDLMPATLVLNKQSADVTDKLLLELRDGSLIETVIIRAPQEGVGQDHSRKTICISTQVG 123 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI---TNVVMMGMGEP 181 CA+ C FC++ G R+L EI+ Q+ + A + N+V+MGMGEP Sbjct: 124 CAMGCVFCASGLAGLKRDLSAGEIVAQLLQVCYREDALTPRAHMELASFDNIVVMGMGEP 183 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDE 240 L N + ++ A+ I+ D+G G RR+T+STSG+VP + +L D LAISLH DE Sbjct: 184 LANYDALIRALTILNADWGLGFGARRITVSTSGLVPKILQLADEPLGFRLAISLHGATDE 243 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 +R++I+P+NK + + L AV+ + EK +T+E++++D VND E A +L ++ Sbjct: 244 VREKIMPVNKAFPLAKLLPAVKAFSEKHGR---MITLEFILIDGVNDSLEQAEKLRDIAL 300 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 D +NLIP+N G + R S +R +RF+ VL + + +R+ +G DIDAACGQL Sbjct: 301 DLHAHVNLIPYNTVEGLAWKRPSITRQERFADVLRARRVSVTLRREKGHDIDAACGQLRL 360 Query: 361 DVIDRTK 367 + Sbjct: 361 KTEKERQ 367 >UniRef50_C6I0U3 Radical SAM family protein n=3 Tax=Leptospirillum RepID=C6I0U3_9BACT Length = 357 Score = 396 bits (1017), Expect = e-109, Method: Composition-based stats. Identities = 148/353 (41%), Positives = 206/353 (58%), Gaps = 7/353 (1%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE-VAE 76 +NLLD E + G +R QV W+Y + +M++I +R L Sbjct: 1 MNLLDHPPSTWGEILEKRGHPAYRGRQVAHWVYQRLTTDPRKMSNIPPGVRDLLSSGTLS 60 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + P V+ +S DGT+K A+ + D +E+V IP + TLC+S+Q GC + C+FC TA Sbjct: 61 LDLPTVLSTAQSLDGTVKMALRLQDGPVIESVLIPRKGQWTLCLSTQAGCGIGCRFCRTA 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 G RNL +EI+ Q AA+ V G+ I ++V MGMGEPL NL ++PA+ + Sbjct: 121 SMGLTRNLSTAEILSQWLLAARFVE-TLPPGESHIDHIVFMGMGEPLANLEALIPAIRSL 179 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 G GLS RR+T+STSG+VP +D LG+ V LAISL AP+D +R EI+P+ + Y+I Sbjct: 180 THPDGAGLSPRRITVSTSGLVPRIDTLGEANTGVRLAISLCAPDDALRREIMPVGRIYSI 239 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 E LAA RR+ N+ R+T EYV+L VND A QL LL K+NLIP+NPF Sbjct: 240 EEILAACRRFPL---RNRDRITFEYVLLAGVNDSPLQARQLGRLLAPFRSKVNLIPFNPF 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 PG+PY R ++S + F +VL + T VRK+ G D+ AACGQLA + D T Sbjct: 297 PGSPYHRPTDSSVAAFQEVLAGFHITATVRKSMGPDVLAACGQLARESQDHTP 349 >UniRef50_A8DJI2 Radical SAM enzyme Cfr family protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI2_9BACT Length = 363 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 126/360 (35%), Positives = 186/360 (51%), Gaps = 9/360 (2%) Query: 8 PENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 + T ++L QQM + G +R Q+ + ++ + +E++ + + + Sbjct: 1 MSSAATVAANQDMLGQTCQQMCALMAERGLPAYRGRQLFQALHRQLVETPEEISVLPRAV 60 Query: 68 RGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCA 126 R +L A ++ + S DGT ++ V D +ETV+IP+ R TLC+SSQ GC Sbjct: 61 RTELAAEASLQPLSLAGIFESLDGTRRYLFKVHDGYSIETVWIPDRGRVTLCLSSQAGCP 120 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C FC+TA G RNL EI+ QV + + + N+V+MGMGEPLLN + Sbjct: 121 MRCAFCATATLGLQRNLTAGEIVAQVLYVLRDTVRQRQQPRPAAVNLVLMGMGEPLLNYD 180 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEI 245 +V+ A+ ++ D G + RRVTLST G+VP + LG D LA+SL A DE+R + Sbjct: 181 HVLHALRVLADPEGLHIVPRRVTLSTVGIVPRIIALGREPDRPRLAVSLTAATDELRARL 240 Query: 246 VPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-- 303 +P+N Y +E A + R+T EYV+LD VND + A L L Sbjct: 241 MPVNLTYPLEALREACLAFPRHPGE---RITFEYVLLDGVNDSEDQARALLRWLAPLRAQ 297 Query: 304 --CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 K+NLIP NP PG P+ R+ RF +L + G T +R+ RG DI AACG LA Sbjct: 298 EAAKVNLIPHNPVPGIPFRPPKLERVLRFQALLRAKGLPTYLRRPRGQDISAACGMLAAT 357 >UniRef50_C8WPW3 Radical SAM enzyme, Cfr family n=3 Tax=Coriobacteriaceae RepID=C8WPW3_EGGLE Length = 353 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 186/349 (53%), Gaps = 14/349 (4%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 ++ + ++ K+LG+ FRA Q+ +W+Y ++DEMT++ LR L E + Sbjct: 11 KSIKTYSLPELASVMKELGQPAFRAQQLQEWLYQRHASSYDEMTNLPGSLRATLAERFPL 70 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPE--DDRATLCVSSQVGCALECKFCST 134 P VV+ Q S DGT K+ + D RVETV IP DR T+C S+Q GC + C FC+T Sbjct: 71 TMPTVVDRQISKDGTRKYLVEFDDGIRVETVGIPSRNGDRLTVCFSTQAGCPIACAFCAT 130 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 Q+GF RNL EI+ QV + + + +TN V MG GEP LN +N + A+ I Sbjct: 131 GQEGFARNLIPGEIVDQVLIVQEDM-------GKRVTNAVGMGQGEPFLNYDNTMAALRI 183 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYN 253 + G + R +++ST G++P L++ LA+SLHA IRD I+P +Y Sbjct: 184 LNHKKGLEIGARHISVSTCGILPGLERFSGEPEQFTLAVSLHAARQPIRDLIMPNVARYK 243 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + + A++ Y+ K+N R+T+EY+M++ VND L + + C +NLIP N Sbjct: 244 LPSLKEALQNYVAKTNR---RITLEYIMIEGVNDAPVDLKALQKFCSNLLCHVNLIPINA 300 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 G+ + SS I+ + + G +R +RG DI ACGQL Sbjct: 301 IEGSEFQPSSPETINLWLSEISKKGTEATLRDSRGSDISGACGQLKNTF 349 >UniRef50_B5YHG3 Radical SAM enzyme, Cfr family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHG3_THEYD Length = 342 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 136/348 (39%), Positives = 213/348 (61%), Gaps = 11/348 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K NL +L +Q+ + D +R+ Q+++W+Y D+ +++T+ +K LR + E Sbjct: 3 KQNLKELTTKQIEKIILDESLPLYRSKQIVQWIYKKFVDSINDITEWSKSLRERFSEKYY 62 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 I + +++ S DGTIK+ + D +++E+V I + DR TLCVSSQVGC L+CKFC T Sbjct: 63 IGRINLFDKRISIDGTIKFLWELEDGEKIESVLISDKDRLTLCVSSQVGCMLKCKFCLTG 122 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G RNL+ EI+ Q + +KI+ R ITN+V MGMGEPLLN NVV A+ + Sbjct: 123 KIGLKRNLKAWEIVDQYIQVSKIIQKE----NRKITNIVFMGMGEPLLNFENVVEALWRL 178 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D S R+TLST+G++PA+ +L + LAISL+A +++ R ++PINKKY + Sbjct: 179 KD--LILFSPSRITLSTAGIIPAIKELPYKAPAIKLAISLNATDNKTRSYLMPINKKYPL 236 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + +R Y K + R+T EY+++ +N + A++L+ELLK P KINLIP+NP+ Sbjct: 237 HELIKTLRDYPLK---PRHRITFEYILIKGINCSEKDAYRLSELLKGIPSKINLIPFNPW 293 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 G + R ++ I F ++L + G++ +RK++G DI AACGQL Sbjct: 294 EGCEFERPEDNEILNFQEILAARGYSVFIRKSKGTDILAACGQLKALY 341 >UniRef50_B8FS78 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Desulfitobacterium hafniense RepID=RLMN_DESHD Length = 357 Score = 393 bits (1009), Expect = e-108, Method: Composition-based stats. Identities = 130/363 (35%), Positives = 196/363 (53%), Gaps = 13/363 (3%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 +++ DLN+ ++ + +LG FR QV +W+ N++E+ +I R KL Sbjct: 1 MNTMKRMDCRDLNQSELTQHCAELGLPKFRGRQVFQWVQQKAVQNWEELRNIGAGDRQKL 60 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPED-----DRATLCVSSQVGC 125 +E ++ V EQ + DGT K+ D +E V + D DR T+CVS+Q+GC Sbjct: 61 QEGLFLQPLRKVREQIAQDGTRKFLFRCADGETLECVLMDYDRRKNRDRHTVCVSTQIGC 120 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 A+ C FC+T G+ RNL EI+GQV ++ Q +TN+V MGMGEPLLN Sbjct: 121 AVGCAFCATGLGGWRRNLSPGEILGQVLDITYLMRQEDPDFQ--VTNIVFMGMGEPLLNY 178 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDE 244 V+ A+E++ D G G+ RR+T+STSGV P + +L D V LA+SLH+ ++ RD+ Sbjct: 179 EAVLKAIELLNDPEGQGIGMRRMTISTSGVAPKIRQLAKDNPQVGLAVSLHSAHNTTRDQ 238 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++P+N+KY +E + A Y +N R+T E ++ E A + LLK Sbjct: 239 LIPMNRKYPLEELMEACGDYTTLTNR---RITFEIALISGQ-ATLEAAQAVGHLLKGQLA 294 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 +NLIP NP G R + + +F++ L S G VR+ +G DIDAACGQL + Sbjct: 295 HVNLIPVNPVAGTGMARPTAKEVQQFAQSLESMGIPVSVREEKGTDIDAACGQLRRQLEC 354 Query: 365 RTK 367 K Sbjct: 355 EQK 357 >UniRef50_Q11QF0 Ribosomal RNA large subunit methyltransferase N n=32 Tax=Bacteroidetes RepID=RLMN_CYTH3 Length = 365 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 139/360 (38%), Positives = 218/360 (60%), Gaps = 8/360 (2%) Query: 7 TPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKV 66 + + +T+ K + L+ +++++FF GEK FR+ QV +W++ +F++MT+++K Sbjct: 12 SMQTTSTEIKKKCIRSLSAEELKDFFVASGEKAFRSRQVYEWLWKRSARSFEQMTNLSKE 71 Query: 67 LRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGC 125 R L+ I + ++Q S+DGTIK+ + D VE V IP DDR T C+SSQVGC Sbjct: 72 TRTLLENNFSINPVTISQKQVSTDGTIKFGFKLHDGYLVEGVLIPADDRMTACISSQVGC 131 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 +L CKFC+T RNL EI QV + AA+ Q P+TN+V+MGMGEPLLN Sbjct: 132 SLTCKFCATGYMDRKRNLEPYEIYDQVVLIKE---AAEEHYQTPLTNIVLMGMGEPLLNY 188 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDE 244 NV+ ++ + + G ++ +R+TLST+G+ + KLGD + LA+SLHA ND R+ Sbjct: 189 TNVLKGIDKVTSEEGLHIASKRITLSTAGIAKMITKLGDEKVKFRLALSLHAANDVKRNT 248 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 I+PIN+ N+ ++ + +++ ++ VT EY++ D VND + A +L K+ PC Sbjct: 249 IMPINETNNLNVLKESLLHFCKETGSS---VTFEYIVFDGVNDTAQDAKELYAFAKNIPC 305 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 KIN+I +NP A + +S ++++F KVL G +R++RG DIDAACGQLA + Sbjct: 306 KINIIEYNPIQEADFMNTSVDKLEQFKKVLTDKGIIVNIRRSRGKDIDAACGQLAIKEVK 365 >UniRef50_C8W8J4 Radical SAM enzyme, Cfr family n=3 Tax=Coriobacteriaceae RepID=C8W8J4_ATOPD Length = 372 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 115/366 (31%), Positives = 184/366 (50%), Gaps = 13/366 (3%) Query: 3 EQLVTPENVTT-KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMT 61 TP++ K +L L+ +Q+ + LG+ FRA Q+ +W++ +FD+M+ Sbjct: 17 ADTPTPDSRPQKTAAKSDLRSLSSEQILDLVTSLGQPKFRAKQIEEWIWSKGATSFDQMS 76 Query: 62 DINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVS 120 ++ K LR +L + + E V Q S DG+ K+ + D VE V +P ++ ++C S Sbjct: 77 NLPKTLREELSKQVILAGAEQVVRQVSEDGSRKYLLRYPDGTSVECVGMPNGNKLSVCAS 136 Query: 121 SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE 180 +Q GCA+ C FC+T G R+L SEI QV +T+VV+MG GE Sbjct: 137 TQAGCAMGCAFCATGASGLTRSLSASEIYEQVMHVRDDFD-------TRVTSVVLMGQGE 189 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPND 239 P +N + + AM + G G+ R +T+ST GV+P + + LA+SLH+ Sbjct: 190 PFMNYDATLTAMRRLNSPDGAGIGARHITVSTCGVIPMIKRFASEPEQFTLAVSLHSAVQ 249 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 + RD ++P +KY++ + Y++K+ R T EY ++ VND L + Sbjct: 250 KTRDALMPGVRKYSLIHLYDIMGEYVDKTGR---RPTYEYALIKGVNDSDNELGALRDFC 306 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 + T C +N+I N G+ + +S +R F L S G +R +RG DIDAACGQL Sbjct: 307 RGTLCHVNIIQLNEIEGSKFHPTSPARAQEFVNSLNSVGVEATIRLSRGSDIDAACGQLF 366 Query: 360 GDVIDR 365 R Sbjct: 367 QKRNAR 372 >UniRef50_Q2JMN2 Ribosomal RNA large subunit methyltransferase N n=47 Tax=cellular organisms RepID=RLMN_SYNJB Length = 352 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 124/355 (34%), Positives = 191/355 (53%), Gaps = 20/355 (5%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 I LL + ++++ G+ +R Q+ W+Y + +++T + R ++ Sbjct: 5 PIPLLGQSLSALKDWAVAQGQPAYRGQQLHAWIYQKGIRSLEQVTVFPRAWREAVQS-YP 63 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + +V+ + DGT+K+ + + D Q +ETV IP R T+CVSSQVGC + C FC+T Sbjct: 64 VGRSRIVQRTEARDGTVKFLLGLADGQLIETVGIPTAKRLTVCVSSQVGCPMACDFCATG 123 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + G+ RNL + EI+ QV + R +++VV MGMGEPLLN + VV A+ + Sbjct: 124 KMGYRRNLELHEILDQVLTVQEDF-------GRRVSHVVFMGMGEPLLNRDTVVQAIRSL 176 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D G + +R +TLST GV + L + V LA+SLHAPN ++R ++P Y + Sbjct: 177 NQDIG--IGQRHITLSTVGVPRQIAWLAQQDLQVTLAVSLHAPNQDLRQRLIPSASHYPL 234 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL-----KDTPCKINLI 309 +T + R Y+ ++ RV+ EY +L VND HA QLA+LL +NLI Sbjct: 235 DTLIQDCRDYMLRTGR---RVSFEYTLLSGVNDLPIHARQLAQLLQQASRSGVQLHVNLI 291 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 P+NP A Y R +R+ F + L + VR+TRG D +AACGQL G + Sbjct: 292 PYNPISEADYQRPHPTRVREFVRQLEQHQVRATVRQTRGLDGNAACGQLRGSFLR 346 >UniRef50_B9CLR1 Radical SAM enzyme, Cfr family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLR1_9ACTN Length = 361 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 112/367 (30%), Positives = 182/367 (49%), Gaps = 16/367 (4%) Query: 1 MSEQLVTPEN----VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDN 56 M + + K L L+ ++ E ++LG+ FRA Q+ WM+ + Sbjct: 1 MQSDTTPSDAYSPQKPSPSIKRGLKTLSHAEIVELVENLGQPKFRAKQLEDWMWSKGATS 60 Query: 57 FDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRA 115 FD+M+++ K LR L + ++ V Q S DG+ K+ + D VE V +P ++ Sbjct: 61 FDQMSNLPKSLRAGLAKTVSFQSITQVTRQLSQDGSRKYLLQYPDNVCVECVGMPTGNKL 120 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 +C S+Q GCA+ C FC+T G R+L SEI QV +++VV Sbjct: 121 AVCASTQAGCAMGCAFCATGAAGLTRSLSASEIYDQVLHIRNDFE-------MRVSSVVF 173 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISL 234 MG GEP +N +N + A+ ++ G G+ R +T+ST GV+P + + + LA+SL Sbjct: 174 MGQGEPFMNYDNALEALRLLNSPHGLGIGARHLTISTCGVIPMIKRFANEPEQFTLAVSL 233 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 H+ + RD ++P +KY++ + Y+EK+ R T EY ++ +ND Sbjct: 234 HSAVQKTRDILMPGVRKYSLLHLYDIMGEYVEKTGR---RPTYEYALIGGINDSENELGA 290 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 L + + T +NLI N PG+ + S+ +R +F L G +R +RG DIDAA Sbjct: 291 LRDFCRGTLAHVNLIQLNEIPGSKFHPSTPARAQQFVTKLGEVGVEATIRISRGADIDAA 350 Query: 355 CGQLAGD 361 CGQL+ Sbjct: 351 CGQLSQK 357 >UniRef50_D1B0V3 Radical SAM enzyme, Cfr family n=10 Tax=Campylobacterales RepID=D1B0V3_SULD5 Length = 358 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 136/364 (37%), Positives = 201/364 (55%), Gaps = 26/364 (7%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K N+ DL+++++ E K FRA Q+ +W+Y +FDEM ++ K L+ +L E Sbjct: 2 EKENIFDLSKEELSEVIK----PAFRAKQIYQWLYQKYVTSFDEMKNLPKELKEQLNETY 57 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIP-------------EDDRATLCVSS 121 + +V + S DG+ K+ A+ D Q VE V +P R T+C+SS Sbjct: 58 YLDPLRIVTIEESCDGSKKYLFALKDNQTVEAVLLPMKQEQVDEEGKLVHHARYTICISS 117 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 QVGC + C FC T + GF RNL EI QV + + R + N+V MGMGEP Sbjct: 118 QVGCKIGCAFCLTGKSGFKRNLTAGEITTQVLMIKRD---NAIAENRRV-NIVYMGMGEP 173 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDE 240 L NL NV A+ I D G +S RR T+STSG+ ++KLG + + LAISLHA +D+ Sbjct: 174 LDNLTNVSKAVRIFSDLDGLSISPRRQTISTSGLSSQIEKLGKMDLGILLAISLHAVDDD 233 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 +R +++PINK YNIE+ + AVR + + RV EY+++ VND + A +L +LL Sbjct: 234 LRQKLMPINKAYNIESIMNAVRGFP---IDARKRVMFEYLVMKGVNDDQKSAKKLVKLLH 290 Query: 301 DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 K+NLI +NP G+ + R S + F + L+ +G +R+++G DI AACGQL Sbjct: 291 GIKAKVNLIYFNPHAGSDFDRPSTKDMIAFQQYLVDHGVLCTIRQSKGLDISAACGQLKD 350 Query: 361 DVID 364 Sbjct: 351 KEQK 354 >UniRef50_C7RGU3 Radical SAM enzyme, Cfr family n=5 Tax=Anaerococcus RepID=C7RGU3_ANAPD Length = 341 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 130/351 (37%), Positives = 198/351 (56%), Gaps = 14/351 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K L D + +++ E F G + FRA QV + ++ ++F M+D++K +R KL E + Sbjct: 2 KDKLNDKSIKELEEIFTKEGYQKFRAKQVYRQIHVNKVNDFKLMSDLSKDMREKLSEKYD 61 Query: 77 IRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 +V +E S D T K+ ++ D + E V++ D R T+C+SSQVGC + CKFC++ Sbjct: 62 FPKMKVEKEFVSELDSTKKYLFSLADGNIIEAVFMDYDKRKTICISSQVGCRMGCKFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + G RNL E+I +V+ ++ G I N+V+MG+GEPL N N+ +EI Sbjct: 122 TKNGRERNLSAGELIEEVYALERLNGD--------INNIVIMGIGEPLDNYENIRKFIEI 173 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 + D+ G LS R +TLSTSG+ P + KL D +DV LA+SLH +D+ R + +PI KY+ Sbjct: 174 ITDEKGRNLSHRSITLSTSGLSPMIRKLADSGLDVNLAVSLHYADDDKRRKFMPIANKYS 233 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 IE+ + A YL+++ RV+ EYV++D VN+ L LLK INLIP NP Sbjct: 234 IESLMEATDYYLDRTKR---RVSFEYVVIDGVNNLDSDVSNLTSLLKGKNVHINLIPLNP 290 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 Y R ++ + F L+ +RK+ G DIDA+CGQL + Sbjct: 291 IEEFSYDRPKSTALRDFRDKLLKKKLNATIRKSMGSDIDASCGQLRNNYAR 341 >UniRef50_B2J6D0 Ribosomal RNA large subunit methyltransferase N n=18 Tax=cellular organisms RepID=RLMN_NOSP7 Length = 364 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 123/375 (32%), Positives = 198/375 (52%), Gaps = 27/375 (7%) Query: 1 MSEQLVTPENVTTKDGK----INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDN 56 MS + + + K LL + ++ + + G+ +R Q+ +W+Y + Sbjct: 1 MSATPLVSQVDSHNPEKSKLIPPLLGASVAELSAWVQQQGQPAYRGKQLHEWIYDKGVRS 60 Query: 57 FDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPE---- 111 +++ +K R ++ E+ I + + DGT+K+ + + D ++ ETV IP Sbjct: 61 LADISVFSKQWRAEVAEI-PIGRSTLHYRSVAPDGTVKYLLRLTDGQIIETVGIPTFAER 119 Query: 112 ----DDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ 167 R T+CVS+QVGC + C FC+T + G+ RNL EII QV + Q Sbjct: 120 GEGPKARLTVCVSTQVGCPMACDFCATGKGGYKRNLARHEIIDQVLTVQEDF-------Q 172 Query: 168 RPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-I 226 + ++NVV MG+GEPLLN NV+ A++ + D G + +R +T+ST G+ + + + Sbjct: 173 QRVSNVVFMGLGEPLLNTENVLAALKSLNQDIG--IGQRSLTVSTVGIRDRIRQFAQNNL 230 Query: 227 DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVN 286 + LA+SLHAPN +R++++P + Y +E LA R Y+E + RVT EYV+L VN Sbjct: 231 QITLAVSLHAPNQALREKLIPSARAYPLEELLAECREYVEITGR---RVTFEYVLLAGVN 287 Query: 287 DGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKT 346 D EHA +L++ ++ +NLIP+NP Y R + RI+ F VL VR + Sbjct: 288 DLPEHALELSKCMRGFQSHVNLIPYNPIQEVDYKRPNRDRIEAFVNVLKQQNTAVSVRYS 347 Query: 347 RGDDIDAACGQLAGD 361 RG + DAACGQL Sbjct: 348 RGLEADAACGQLRAS 362 >UniRef50_D0RN88 Radical SAM enzyme, Cfr family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN88_9RICK Length = 357 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 142/361 (39%), Positives = 214/361 (59%), Gaps = 11/361 (3%) Query: 18 INLLDLNRQQMREFFK-----DLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 I DLN ++++ F D + RA+QV K+ Y + + +++ + LR +L Sbjct: 2 IEFADLNYREVKSIFSNNFNLDKKKSSMRANQVWKFYYQKGYSDPNLFSNLTQSLRDELL 61 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKF 131 ++ P++ +Q S DGTIKW + + D+ VETVYIP + +TLC+SSQVGC L CKF Sbjct: 62 KIVNFSRPKIKNKQVSKDGTIKWLLELNDKNLVETVYIPSETHSTLCISSQVGCTLNCKF 121 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C T Q +NL +EII Q+ A + K + I N+V MGMGEP N N+ + Sbjct: 122 CHTGIQPLVKNLSSNEIISQILIAKDELNDWKEQ--KKINNIVYMGMGEPFYNFENIKKS 179 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 +EI+ D+ G S +++T+STSG+ P + K + I LA+SLHAPN+EIR+EI+PINKK Sbjct: 180 VEILKDENGLNFSNKKITVSTSGISPNIKKAANEIGTYLALSLHAPNNEIRNEIMPINKK 239 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 YNIE + +Y + N ++ IEYV+L VND + A +L++++ PCK+NLI + Sbjct: 240 YNIENIIEHCSQY---AKENGEKIFIEYVLLKDVNDTEQCAKELSKIMSQFPCKLNLIQF 296 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 NP+PG Y ++ + +F +++ G +RK+RGDDI ACGQL + TL Sbjct: 297 NPWPGVKYKTATKEQTSKFIEIIKKNGHVVTLRKSRGDDILGACGQLKTASEREKRSTLS 356 Query: 372 K 372 K Sbjct: 357 K 357 >UniRef50_Q2J713 Ribosomal RNA large subunit methyltransferase N n=137 Tax=Bacteria RepID=RLMN_FRASC Length = 421 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 146/369 (39%), Positives = 204/369 (55%), Gaps = 11/369 (2%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC--CDNFDEMTDINKVLRGKLKE 73 +L DL RQ+ R+ LG+ FRADQV + Y D + MTD+ + R L + Sbjct: 34 APRHLADLTRQERRDVAVSLGQPAFRADQVARHYYARLIAADEPEAMTDLPERDRQPLLD 93 Query: 74 VAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKF 131 R V DG T K A D +E+V + DRAT+CVSSQ GC + C F Sbjct: 94 ALLPRLLVPVRTLSCDDGLTRKTAWRTVDGASLESVIMRYPDRATVCVSSQAGCGMGCPF 153 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR-PITNVVMMGMGEPLLNLNNVVP 190 C+T Q G RNL +EI+ QV AA+++ ++ G ++NVV MGMGEPL N V+ Sbjct: 154 CATGQGGLTRNLSTAEIVEQVVHAARVLRRRELAGGETRLSNVVFMGMGEPLANYAAVIA 213 Query: 191 AMEIM--LDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVP 247 A+ + G GLS R +T+ST G+VPA+ +L + + V LA+SLHAP+D +R+E+VP Sbjct: 214 ALRRLTAHPPEGLGLSARGLTVSTVGLVPAIRRLAGEGLPVTLAVSLHAPDDVLRNELVP 273 Query: 248 INKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 IN ++ + LAA Y E + RV++EY ++D VND A LA+LL +N Sbjct: 274 INTRWPVVEVLAAAWEYAEVTGR---RVSVEYALIDGVNDDVGRADALADLLVGRLAHVN 330 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 LIP NP G+ + S+ + F + L G T VR TRG +I AACGQLA + + + Sbjct: 331 LIPLNPTGGSSWRASAPAGQRAFVRRLRDRGIVTTVRDTRGREIAAACGQLAAEPAGKPE 390 Query: 368 RTLRKRMQG 376 RT R G Sbjct: 391 RTDRPEQVG 399 >UniRef50_C0BG68 Radical SAM enzyme, Cfr family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG68_9BACT Length = 358 Score = 386 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 131/351 (37%), Positives = 203/351 (57%), Gaps = 8/351 (2%) Query: 13 TKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 + K ++ L++++++EFF G F+ QV +W++ +F+ MT+++ R L Sbjct: 10 EERVKKDIRALSKEELQEFFVSQGAPSFKGGQVYQWLWQKGVHDFELMTNLSLTHRNLLD 69 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKF 131 EI+ + +QRS+DGTIK A+ + D V E+V IP R T CVSSQVGC+L+C F Sbjct: 70 AHFEIKHINIDFQQRSTDGTIKNAVKLHDNLVVESVLIPTSTRTTACVSSQVGCSLDCTF 129 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+TA RNL EI QV + +K+ QRP++N+V MGMGEPL+N NNV+ A Sbjct: 130 CATAALKRMRNLNADEIYDQVVAMDQ---QSKLYHQRPLSNIVFMGMGEPLMNYNNVLAA 186 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINK 250 +E + D G+S RR+TLSTSG+ + K+ D + LA+SLH+ E+R+ I+P K Sbjct: 187 IEKITDTEALGMSPRRITLSTSGIPKLIRKMADDKVKFGLAVSLHSARQEVRERIMPFAK 246 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 K+ + + ++ + + ++T EYV+ + VND E L L + P K+N+I Sbjct: 247 KFPLTELIESLEYWYAYTK---KQITFEYVVWEGVNDLKEDIQALVGLCRRIPSKVNIIQ 303 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 +NP G+ + + + ID + L + R++RG DIDAACGQLA Sbjct: 304 YNPIDGSSMKQGNQTVIDAYIAALTKARISVTYRRSRGVDIDAACGQLANK 354 >UniRef50_O80746 T13D8.12 protein n=9 Tax=Spermatophyta RepID=O80746_ARATH Length = 454 Score = 386 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 139/352 (39%), Positives = 209/352 (59%), Gaps = 10/352 (2%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHY--CCDNFDEMTDINKVLR 68 + K+ L + ++E+ + G +P +A + K +Y +N DE+ +NK L+ Sbjct: 84 KRDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLK 143 Query: 69 GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIP-EDDRATLCVSSQVGCA 126 + E AE A + + +SDGT K + D +ETV IP + R T+CVSSQVGCA Sbjct: 144 RMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCA 203 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC T + G RNL +EI+ Q A +++ + ITNVV MGMGEP N++ Sbjct: 204 MNCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGS----ITNVVFMGMGEPFHNID 259 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIV 246 NV+ A IM+D+ G S R+VT+STSG+VP L + + ALA+SL+A DE+R+ I+ Sbjct: 260 NVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIM 319 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 PIN+KY + L +R L S+ ++ +V EYVML VND + A +L EL++ PCKI Sbjct: 320 PINRKYKLSLLLETLREGL--SSRHKYKVLFEYVMLAGVNDSMDDARRLVELVQGIPCKI 377 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 NLI +NP G+ + ++ ++ +F VL G T ++R +RG+D AACGQL Sbjct: 378 NLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQL 429 >UniRef50_A9A3L9 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=RLMN_NITMS Length = 351 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 125/358 (34%), Positives = 202/358 (56%), Gaps = 19/358 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV-AE 76 +L L ++M + D+G +RADQ++ +Y+ + +++ + K LR + E Sbjct: 2 TDLYRLLPEEMEKLVIDMGYDRYRADQILLPLYYKFPKDINDIPQLPKKLREEFTEAGYT 61 Query: 77 IRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDD-------RATLCVSSQVGCAL 127 I + + + S DG T K + + D VETV + + R+T+CVS+Q+GCA+ Sbjct: 62 IGSAKEIHRVVSDDGDTTKLLLELSDGSSVETVLMQYEPTKIGGHPRSTICVSTQIGCAM 121 Query: 128 ECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187 C FC+T Q GF NL+ I+ QV A+++ +TN+V MGMGEP+ N + Sbjct: 122 GCVFCATGQMGFETNLKAEHIVSQVIHFAELLEQ----RGEHVTNLVFMGMGEPMANYDE 177 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIV 246 ++ A++I+ D GFGL +R +T+ST G+ ++KL + + + LAISLHAPN+E+R ++V Sbjct: 178 MIRAVKILTHDRGFGLGQRHITISTIGITSGIEKLAEENLQIGLAISLHAPNNELRKKLV 237 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 P ++E + + R Y +K+ RVT EY +++ VND E AH+LA LL+ + Sbjct: 238 PTAGPNSVEDIIKSGRDYFKKTGR---RVTFEYALMEGVNDSPEIAHELARLLRGNGSHV 294 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 N+IP NP G + R S + F ++L G VR +G +I AACGQL D++ Sbjct: 295 NIIPINPTAG-DFKRPSEKNVLEFEQILRKSGVNCTVRVEKGTEISAACGQLRTDIVG 351 >UniRef50_D1B6H8 Radical SAM enzyme, Cfr family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6H8_THEAS Length = 462 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 133/369 (36%), Positives = 194/369 (52%), Gaps = 13/369 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 K++ L L+ + + LGEK FRADQV W Y F M+D++ LR +L Sbjct: 2 SKMDALSLSYEDWVREMEALGEKRFRADQVCGWFYRRHVFEFQLMSDLSLELRNRLDGAF 61 Query: 76 EIRAPEVVEEQRS-SDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCST 134 + P+++ + S DGT K+ VE+V I R T CVS+QVGC L C FC+T Sbjct: 62 RVGLPKMLGMRASGRDGTKKFLFDFDGSSVESVAIWHPGRITACVSTQVGCPLGCPFCAT 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 Q GF RN+ V E++GQ +G I N+V MGMGEP+LN +N++ A+ Sbjct: 122 GQSGFERNMTVGEMVGQFLAMEARLGE--------IKNLVFMGMGEPMLNYHNLIGAIRN 173 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYN 253 + GL R +T+STSG++P + L + + V LA+SLHAPNDE+RD++VPIN +Y Sbjct: 174 LNHPKMRGLGIRHITVSTSGIIPGILNLAREGLGVRLAVSLHAPNDELRDQLVPINAQYP 233 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 ++ A+ Y E + R+TIEY + D VND A QL E LK +NLIP + Sbjct: 234 LKELKRALMEYQEITGD---RITIEYSLFDQVNDSVPMARQLGEYLKGLSAFVNLIPGSC 290 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKR 373 + S R+ F +L + G+ +R+++G D+ ACGQL V + + Sbjct: 291 VGDQRFRPSPPFRVRAFGDLLTAMGYPVAMRQSKGSDVGGACGQLRRQVSPGIQEASPQG 350 Query: 374 MQGEAIDIK 382 Q Sbjct: 351 GQRGGEQAP 359 >UniRef50_B3QS43 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RLMN_CHLT3 Length = 369 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 127/363 (34%), Positives = 198/363 (54%), Gaps = 15/363 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 + K ++ L+ + + G+ FRA Q+ W+Y + +F +M +++ + L + Sbjct: 2 NEVKHDIKALSLEALMALINSYGQPAFRAKQIFHWIYAHGVTDFAQMKNLSASFQTLLSQ 61 Query: 74 VAEIRAPEVVEEQRS----SDGTIKWAIAVGD-QRVETVYIPEDD--RATLCVSSQVGCA 126 + + + + S + T+K+ + D Q +E+V+IP D R TLC+SSQVGCA Sbjct: 62 HFTVSSIQPHADTVSHEITPEQTVKFLFRLSDEQSIESVFIPSDSTSRNTLCISSQVGCA 121 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 CKFC+T GF RNL + EI+ QV + +G ITNVV MGMGEPL N + Sbjct: 122 FACKFCATGYMGFIRNLTIGEILDQVLWVNRWLGDQ---RGGKITNVVFMGMGEPLANFD 178 Query: 187 NVVPAMEIMLDDF-GFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDE 244 N + A+ I+ + F +S R++T+ST G +P + +L D I+ LAISLH+ + IR+E Sbjct: 179 NCLAAIRILTNPDYAFQISTRKITVSTVGFIPGIQRLIDTGINCKLAISLHSAHQAIREE 238 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 ++PI K+Y++ T A + RY + + +T EY ++ +ND + A L++ K C Sbjct: 239 LIPIAKEYSLATLKAILTRYNQA---YKQPITFEYSLIHKINDSEQDAILLSKFCKGINC 295 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 KINLI +N Y S F + + +G T VRK+RG DI AACGQLA + Sbjct: 296 KINLIDYNSVDNIDYLPSPEGHKQAFIRKCIEHGLTVTVRKSRGADIQAACGQLAIQHVH 355 Query: 365 RTK 367 K Sbjct: 356 GKK 358 >UniRef50_A4SEQ5 Ribosomal RNA large subunit methyltransferase N n=10 Tax=Chlorobiaceae RepID=RLMN_PROVI Length = 373 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 130/378 (34%), Positives = 202/378 (53%), Gaps = 14/378 (3%) Query: 1 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM 60 M + + T N+ DL QQ+ ++ E +RA Q+ +W++ + ++F+EM Sbjct: 1 MRSPQTSEKTHTMAKTLQNITDLTLQQLTGRLAEMKEPAWRAKQIHEWLFSHRAESFEEM 60 Query: 61 TDINKVLRGKLKEVAEIRAPEVVEEQRSSDG-----TIKWAIAVGDQ-RVETVYIPEDDR 114 T ++K LR L+E I PEV + S++G T K + + D +ETV IP R Sbjct: 61 TTLSKALRKALEETFAITPPEVEQHDNSTEGACPGPTEKLLLRLPDGAMIETVLIPGPGR 120 Query: 115 ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 T C+SSQ GCAL+C FC+T GF RNL EI GQ ++ A+ ++ ITN+V Sbjct: 121 LTACLSSQAGCALQCSFCATGSLGFKRNLTPGEITGQANALNSMLAAS--GREQKITNIV 178 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFG-FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAI 232 MGMGEPLLN NV A+E + +S+R++T+ST G++P + KL + LA+ Sbjct: 179 FMGMGEPLLNTLNVFDAVETLSTRGYTSSISQRKITISTVGIIPEIAKLATSGMKTKLAV 238 Query: 233 SLHAPNDEIRDEIVPIN-KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 SLH+ E R+ ++P+ ++Y ++ + Y + + VT+ Y++L+ VND E Sbjct: 239 SLHSAFQEKRESLMPLAARRYPLDELQPVLAHYAKNTGEP---VTLVYMLLEGVNDTLED 295 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI 351 A QL CKINLI +N P+ + DRF L+ G +RK+ G I Sbjct: 296 ARQLIRFASRFFCKINLIDYNSIVNIPFQSVCSETRDRFRDRLLEAGLQVTLRKSYGTSI 355 Query: 352 DAACGQLAGDVIDRTKRT 369 AACGQLA ++ + ++ Sbjct: 356 HAACGQLAAKGMEHSNKS 373 >UniRef50_O66732 Ribosomal RNA large subunit methyltransferase N n=7 Tax=Aquificales RepID=RLMN_AQUAE Length = 348 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 133/352 (37%), Positives = 201/352 (57%), Gaps = 16/352 (4%) Query: 22 DLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPE 81 + +++++ F +LG +P+RA QV +W+Y +F++MTD+ K R LKE E Sbjct: 6 NYTLEELKKRFTELGLEPYRAKQVFRWVYKKFVTDFEKMTDLGKKHRELLKEHFAFHPLE 65 Query: 82 VVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 ++ + D +K+ D + ETV I E D TLCVSSQ+GCA+ C FC+TA G Sbjct: 66 KLDRVEAPD-AVKYLFKTKDGHILETVLIKERDHYTLCVSSQIGCAVGCTFCATALDGLK 124 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 RNL +EII Q + + +G I NVV MGMGEPL N NV A+EIM+ G Sbjct: 125 RNLSTAEIIDQYLQVQQDLGE------EKIRNVVFMGMGEPLANYENVRKAVEIMVSPEG 178 Query: 201 FGLSKRRVTLSTSGVVPALDKLGDMI---DVALAISLHAPNDEIRDEIVPINKKYNIETF 257 LSKRR+T+STSG+V + ++ +V LA+SL+A + + R+E++P+ K +E Sbjct: 179 LDLSKRRITISTSGIVAQIKRMAQDPVMKEVNLAVSLNAVSQKKREELMPLTKTNTLEEL 238 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KDTPCKINLIPWNPFP 315 + ++ Y R+T+EYV++ VND A +LA+L+ K+NLIP+NP P Sbjct: 239 MEVLKNYPLPKYR---RITLEYVLIKGVNDSPNDAERLAKLIGRHKKKFKVNLIPFNPDP 295 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 PY R + + I +F KVL YG + VR ++G ++ ACGQL + + Sbjct: 296 NLPYERPALTDIMKFQKVLWKYGISNFVRFSKGVEVFGACGQLRTQRLQLQR 347 >UniRef50_Q8RFZ9 Ribosomal RNA large subunit methyltransferase N n=15 Tax=Fusobacterium RepID=RLMN_FUSNN Length = 358 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 135/361 (37%), Positives = 209/361 (57%), Gaps = 17/361 (4%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 K+ KIN+L+L ++++ E LG K F +V W++ +FDEMT+++ R LKE Sbjct: 2 KNEKINILNLTQEELTELLVSLGLKKFYGKEVFIWLHKKITRSFDEMTNLSLKDREILKE 61 Query: 74 VAEIRAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIPEDD------RATLCVSSQVGC 125 I +++ Q S D T K+ + D +ETV + D R TLCVSSQVGC Sbjct: 62 KTYIPFFNLLKYQVSKIDKTEKFLFELEDGGTIETVLLRHKDSKNKEIRNTLCVSSQVGC 121 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 ++C FC+T Q G+ RNL VSEI+ Q++ + + + N+V MGMGEPLLN+ Sbjct: 122 PVKCSFCATGQSGYMRNLSVSEILNQIYTVERRLRK----KGENLNNLVFMGMGEPLLNI 177 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDK-LGDMIDVALAISLHAPNDEIRDE 244 +N+ A+ I+ ++ G +SKR++T+STSGVV ++K L D I + LAISLH+ +E RD+ Sbjct: 178 DNLSKALSIISNENGINISKRKITISTSGVVSGIEKILLDKIPIELAISLHSAINEKRDK 237 Query: 245 IVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 I+PINK + +E A + Y +++ R+T EY+++D+ N A+ LA+ + Sbjct: 238 IIPINKNFPLEDLSAVLIEYQKQTKR---RITFEYILIDNFNISETDANALADFIHQFDH 294 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDAACGQLAGDVI 363 +NLIP+N GA + R S +I++F L + +R+ +G DID ACGQL Sbjct: 295 VVNLIPYNEVEGAEHTRPSVKKINKFYIYLKNVRKVNVTLRQEKGSDIDGACGQLRQRNK 354 Query: 364 D 364 Sbjct: 355 K 355 >UniRef50_C9LG49 Radical SAM enzyme, Cfr family n=16 Tax=Bacteria RepID=C9LG49_9BACT Length = 360 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 122/358 (34%), Positives = 195/358 (54%), Gaps = 17/358 (4%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + K NLL L ++++ + L F Q+ +W+Y + DEMT+++ R Sbjct: 1 MADYQQKKNLLGLTPSELKDVARSLQLPAFVGKQIARWLYVHHVREIDEMTNLSLAAREL 60 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIA-VGDQRVETVYIPEDDRATLCVSSQVGCALEC 129 LK+ I ++ Q S DGTIK+ + +ETV+IP+ DR TLCVSSQVGC + C Sbjct: 61 LKQQYVIGNSSPIDAQYSKDGTIKYLYRTLSGDYIETVFIPDGDRGTLCVSSQVGCKMHC 120 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC T +QG+ +L ++I+ Q++ + + +TN+V MG GEP NL+NV+ Sbjct: 121 AFCMTGRQGYVASLSAADILNQIYSLPE---------RERLTNIVFMGQGEPFDNLDNVL 171 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPIN 249 A EI+ G+ S +R+T+ST G++ L + D +LAISLH R++I+P+ Sbjct: 172 RATEILTSPEGYAWSPKRITVSTIGLLQGLKRFLDESKCSLAISLHHAVPAEREKIMPVE 231 Query: 250 KKYNIETFLAAVRRY-------LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 + Y I+ + +++Y E + Q R++ EY++ VND + A + ELLK Sbjct: 232 RAYPIKDVVRLLKQYDFCRPRTNEGVGSKQRRLSFEYIVFSGVNDSLKDAAAIIELLKGL 291 Query: 303 PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 C+INLI ++ P P + ++ RF L ++G T +R +RG DI AACG L+ Sbjct: 292 DCRINLIRFHQIPDTPLKGVDDQKMLRFRDYLTAHGIFTTIRASRGQDIFAACGLLST 349 >UniRef50_D1BMC5 Radical SAM enzyme, Cfr family n=3 Tax=Veillonella RepID=D1BMC5_VEIPT Length = 348 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 132/354 (37%), Positives = 200/354 (56%), Gaps = 14/354 (3%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 I LL + ++++ FK + FRA Q+ ++YH +F++MT K LR L + I Sbjct: 2 IELLGKSLEELQSIFKTHNIQKFRAKQLFDYIYHRYIFDFEDMTQFPKDLRQWLNDNCVI 61 Query: 78 RAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 P ++ E + DG T K + + DQ RVE V + + ++CVSSQVGCA+ C FC++ Sbjct: 62 SLPTLITESIAPDGKTRKILVEMTDQSRVEAVLMEQHYGYSVCVSSQVGCAMGCVFCAST 121 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q G R+L V+EIIGQV + I +VV+MG GEPL N +NV+ A++++ Sbjct: 122 QGGLYRDLTVAEIIGQVVIFGALTK-------EEIHSVVVMGAGEPLQNYDNVLQALQLL 174 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNI 254 D +S R++T+ST G VP + KL D + + LA+SLHA N+E+R I+P+ +Y + Sbjct: 175 HDPMICNISYRKMTISTCGWVPNIYKLADEALPITLALSLHATNNEVRRSIMPVGARYEL 234 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNP 313 L AV+ Y + RVT EY+++D VN + AH L ++ KD P C +NLIP N Sbjct: 235 TEVLDAVKYYYNTTQR---RVTFEYILIDSVNASMDEAHALGKICKDFPNCHVNLIPVNG 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 + S + ++ F ++ SYG + VRK GD I AACGQL + + Sbjct: 292 NEHIELYKPSITNMNTFKDIVSSYGVSVTVRKEMGDAIQAACGQLKAAHGRKKE 345 >UniRef50_UPI00016C54F2 hypothetical protein GobsU_25056 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C54F2 Length = 355 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 125/345 (36%), Positives = 188/345 (54%), Gaps = 7/345 (2%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 + + +R + + G+ P R +Q+ K + F++M+D+ K LR L + + V Sbjct: 1 MPAETLRAWLTERGQPPMRVNQICKQILANRATAFEDMSDLPKGLRADLAGAFRVFSMSV 60 Query: 83 VEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 +SD T K+ + + D R +E V I +D RAT C+S+QVGC + C FC++ G R Sbjct: 61 ERHFAASDDTHKFVLRLADGRMIEAVLIQDDGRATACISTQVGCGMGCVFCASGLNGVVR 120 Query: 142 NLRVSEIIGQVWRAAKIVGAA--KVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 NL E++ Q+ + A +T++V+MGMGEPL NL+N++ A+ + D Sbjct: 121 NLTAGEMVEQLVLLRNLTDANSTNPERAPRLTHIVVMGMGEPLANLDNLLDALAVAGDKN 180 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G G+ R VT+ST G+ + KL + LA+SLHAPNDE+R IVP N K ++ L Sbjct: 181 GLGIGARHVTISTVGLPAKIRKLAESGKQYHLAVSLHAPNDELRTRIVPTNDKVGMDAIL 240 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 AA + EK+ +VT EYV+L +ND HA QLA LL+ +NLIPWN G Sbjct: 241 AAADEFYEKTGR---QVTYEYVVLGGLNDQAPHARQLAGLLRGRQAHVNLIPWNAVEGLA 297 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 + R +++ + L G + VRK +G +IDAACGQL Sbjct: 298 FKRPADADLQYLIDTLRRGGISVKVRKRKGAEIDAACGQLRRQAE 342 >UniRef50_B2RMI0 Ribosomal RNA large subunit methyltransferase N n=36 Tax=Bacteroidales RepID=RLMN_PORG3 Length = 352 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 131/363 (36%), Positives = 209/363 (57%), Gaps = 14/363 (3%) Query: 8 PENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 + T + K+ LL ++ +++ +G F Q+ +W+Y +F EMT+I++ Sbjct: 1 MKQQTETEKKVVLLGMSLEELTTVALRMGMPRFAGKQLAEWIYVRRATDFAEMTNISQAN 60 Query: 68 RGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCA 126 R KL E+ ++ + Q S DGT K+ VG+ R VE+V IPE DRATLC+SSQVGC Sbjct: 61 RQKLAEIYDLGRYPWSDVQCSVDGTKKYLFPVGEGRFVESVLIPEGDRATLCISSQVGCK 120 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 ++C FC T +QG+N NL +EI+ Q++ + +TN+V MGMGEPL N + Sbjct: 121 MDCLFCMTGKQGWNGNLSAAEILNQIFSVDEAAE---------LTNLVYMGMGEPLDNTD 171 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIV 246 V+ ++E + + +G G S +R+T+ST G L++ LA+SLH+P E R +++ Sbjct: 172 EVLRSIEALTEPWGMGWSPKRITVSTIG-AKGLERFLAESRCHLAVSLHSPFPEERRKLM 230 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 P K + I L +R Y + S Q RV+ EY++ D +ND HA +LA +L+ PC+I Sbjct: 231 PGEKAFPIMQTLDRIRAY-DFSG--QRRVSFEYIVFDGLNDDMRHADELAAILRGIPCRI 287 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 NLI ++ P S +R++ F K + S+G+T +R +RG+DI AACG L+ + + Sbjct: 288 NLIRFHKIPAVSLRSSDTARMEAFRKRMESHGYTCTIRASRGEDIFAACGMLSTSKAESS 347 Query: 367 KRT 369 + Sbjct: 348 EEK 350 >UniRef50_Q0F2U6 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2U6_9PROT Length = 364 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 130/363 (35%), Positives = 195/363 (53%), Gaps = 11/363 (3%) Query: 7 TPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKV 66 T T L LN ++ + + FRA QV+ W + N M +I Sbjct: 2 TQTRKTATADLAQLSALNLSDLQGLMEAWMQPKFRAKQVLDWC-NKGILNPALMKNIPDA 60 Query: 67 LRGKLKEVAEIRAPEVVEEQRSSDGTIKWAI-----AVGDQRVETVYIPEDDRATLCVSS 121 LR +L ++ + S+DGT K+ + + +E V+IPE+ R T+C+SS Sbjct: 61 LRDRLLTSLMCEPLRLIRRECSTDGTRKYVFALNRPRLAGKMIEAVFIPEEKRGTVCISS 120 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV--TGQRPITNVVMMGMG 179 QVGC L+C FC T QGF NL EI+ QV + + +T++V MGMG Sbjct: 121 QVGCVLDCPFCHTGTQGFEGNLSAGEIVAQVLAIKADLRHEPMTDDLHNDVTHIVYMGMG 180 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPND 239 EPL N V ++ I++D+ G LS+RR+T+STSG+ P +++LG + V LAISLH+ D Sbjct: 181 EPLANEEGVHGSLAILMDEDGLKLSRRRITVSTSGLTPQIERLGAVHPVNLAISLHSAID 240 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E RD +VPIN+K+ + + Y + + +T+EYV+LD VND E LA + Sbjct: 241 EKRDLLVPINRKHPLAQLRECLDAYPLATQRH---ITLEYVLLDGVNDQAEDLAALARFV 297 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 +NLI +NP+PG Y ++ +++F++ L+S G VR++RG DI AACGQL Sbjct: 298 NPEREWVNLIQFNPYPGTSYRGTAKESMNQFAQHLISKGIRATVRRSRGQDIMAACGQLK 357 Query: 360 GDV 362 D Sbjct: 358 ADT 360 >UniRef50_C1EEM6 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EEM6_9CHLO Length = 375 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 125/371 (33%), Positives = 183/371 (49%), Gaps = 23/371 (6%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYH-YCCDNFDEMTDINKVLRG 69 D NLL + +++ F ++ G FR Q+ +Y N D++ + K R Sbjct: 15 KPGVDPSYNLLGMTLPELKTFAEEAGLPKFRGKQLRDHLYGVKPAKNIDDLVTLPKAARR 74 Query: 70 KLKEV-AEIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDD----RATLCVSSQV 123 +L + + V S DGT K + + D RV ETV IP + R T CVSSQV Sbjct: 75 QLLDAGVSVGRSVVHHVAGSPDGTTKLLLRLHDDRVVETVGIPAHEAGHRRLTACVSSQV 134 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GC + C FC+T + GF RNL EI+ QV + +T++V MGMGEPLL Sbjct: 135 GCPMRCTFCATGKGGFARNLATHEIVDQVVSLEEHF-------GERVTHIVFMGMGEPLL 187 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIR 242 N+ NV+ A E + + G + R +T+ST GV A+++L + LAISLHAPN E+R Sbjct: 188 NVPNVLRAHEALNKEVG--IGSRHITISTVGVRGAIERLARAKLQSTLAISLHAPNQELR 245 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--K 300 + ++P K Y ++ L ++Y + RVT EY +L VND + A +L LL Sbjct: 246 ERLIPSAKAYPMQELLNDAQQYFIATGR---RVTFEYTLLAGVNDSIQQAEELGRLLYKN 302 Query: 301 DTPCKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 +N+IP+NP AP + R + I F L +R++RG + AACGQL Sbjct: 303 KLASHVNIIPYNPVDDAPDFKRPGRASILNFRNTLEQMNVPASIRQSRGLEAAAACGQLR 362 Query: 360 GDVIDRTKRTL 370 + Sbjct: 363 NAYQKNALQAE 373 >UniRef50_C9LLK4 Radical SAM enzyme, Cfr family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK4_9FIRM Length = 345 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 193/351 (54%), Gaps = 13/351 (3%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K N+ LN Q++ + G FRA Q+ ++Y +FDEMT ++ +R LKE + Sbjct: 2 KRNIWGLNLQELETWVVGNGFPRFRAKQLRDYLYKRHIFHFDEMTQFSQKMRDWLKENGQ 61 Query: 77 IRAPEVVEEQRSSD-GTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 I P ++ +S D TIK + + D VETV + ++CVS+QVGCA+ C FC++ Sbjct: 62 IDKPVIISRAQSDDEKTIKLLLKLKDGSLVETVCMCHHYGNSICVSTQVGCAMGCIFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 ++G RNL EI+ Q++ ++ P ++V+MG GEPL N V+ + + Sbjct: 122 TRKGLERNLTAGEILAQMYAFKELYDI-------PFHSIVLMGAGEPLTNYKEVLHFIHL 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYN 253 D +S R +T+ST G+VP + +L D I + LAISLHAPND IR+ +VPI+K + Sbjct: 175 ANDPELLNISYRNITISTCGIVPQIYRLADENIPITLAISLHAPNDRIRNVLVPISKNFR 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 I+ ++A Y +K+ RVT EY+++ +N E+A +L L+ PC INLIP N Sbjct: 235 IKDVVSAAEYYFKKTKR---RVTFEYILIKDMNASVENAKELCRLIGKMPCHINLIPINS 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 I RF +L+ G T VRK GD+I AACGQL ++ Sbjct: 292 TEHIKLYPPEWKEIKRFQDILLKKGKETTVRKQMGDEIQAACGQLKRRYLN 342 >UniRef50_Q3ASD4 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=RLMN_CHLCH Length = 366 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 131/359 (36%), Positives = 196/359 (54%), Gaps = 16/359 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 INL+DL ++ GE PFRA Q+ +W++ + ++F M+ + LR KL E Sbjct: 13 PINLVDLRYNELHNAITAFGEPPFRAKQIHEWLFSHHANSFAAMSSLPLRLREKLAERFT 72 Query: 77 IRAPEVVEEQRSSD-----GTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECK 130 ++ PEVVE Q S + T K + + D +E V IP ++R T C+SSQ GC ++C Sbjct: 73 LQRPEVVEVQESCESGCLRPTRKILLKLSDGALIECVLIPAEERMTACLSSQAGCPMQCT 132 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+T G RNL EI Q++ + + + ITNVV MGMGEPLLN +NV+ Sbjct: 133 FCATGTMGLQRNLSAGEIWEQLYA----LNGLALQEGKTITNVVFMGMGEPLLNTDNVLE 188 Query: 191 AMEIMLDDFG-FGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPI 248 A+ M LS+R++T+ST G+VP +++L + LA+SLH+ E+R +++PI Sbjct: 189 AIATMSSRNYNLSLSQRKITISTVGIVPEIERLSRSGLKTKLAVSLHSARQEVRQQLMPI 248 Query: 249 NK-KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 +Y + ++ Y + + +TI Y+ML+ VND E AH LA + CKIN Sbjct: 249 AAERYPLPLLSKSLEAYSKATGEA---ITIVYMMLNGVNDSKEDAHLLARYCRHFSCKIN 305 Query: 308 LIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 LI +NP +G S+ + F LM+ F VRK+ G ++AACGQL RT Sbjct: 306 LIDYNPILTIRFGSVQESQKNEFQAYLMAQKFHVTVRKSYGASVNAACGQLVTQQQRRT 364 >UniRef50_Q01QF9 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Acidobacteria RepID=RLMN_SOLUE Length = 356 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 201/353 (56%), Gaps = 10/353 (2%) Query: 12 TTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKL 71 T L+ ++ +RE + +RA Q+ + +Y N +++ + LR L Sbjct: 11 TGNRMSQPLVGMDLTDLREALGS-DQPGYRAKQIYEAIYRGQAANLVQISTLPAQLREDL 69 Query: 72 KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECK 130 E+ PE+ +S+DGT ++ + + D R VETV +P+ +R T+C+SSQVGC ++CK Sbjct: 70 AARHEVGLPEIAHLYQSTDGTRRYLLKLEDGRTVETVLMPDGERDTICISSQVGCPVDCK 129 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC TA G R+L EI+GQV A+ + G+ N+VMMG GEPLLNL NVV Sbjct: 130 FCMTALMGLERSLTAGEIVGQVLLVARENQLRQDGGRL---NIVMMGQGEPLLNLENVVK 186 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPIN 249 A I+LD GFGLS RRVT+ST+G++P + +LG LAISL+A +E R E++PI Sbjct: 187 ATRILLDPAGFGLSPRRVTVSTAGIIPKIAELGREPVRPKLAISLNASTEESRQELMPIT 246 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 +KY+++ LAA + Y ++T EYV+L VND A ++ +LL + K+NLI Sbjct: 247 RKYHLKDLLAACKAYPL---RPWEKLTFEYVLLRGVNDTDADARRVVKLLSNLNAKVNLI 303 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 NP PG PY R+ F ++ VRK RG DI AACGQL +V Sbjct: 304 ALNPGPGIPYATPDPERVASFQNIVRRA-LPCFVRKPRGLDIYAACGQLKRNV 355 >UniRef50_A8SLZ1 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLZ1_9FIRM Length = 348 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 127/356 (35%), Positives = 194/356 (54%), Gaps = 13/356 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 + KI L +++ + F LGEK FRA+Q ++M+ + + KVL KLKE+ Sbjct: 3 NKKIEFNSLKIEELEDLFLSLGEKKFRAEQFFRFMHQKKNFEIENCKQLPKVLIEKLKEI 62 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 I + + S D T K+ I + D R+ ETV++ T+C+SSQVGC + C FC Sbjct: 63 GYINTSSIYTKYESKLDNTKKYLIKLFDNRIIETVFMDYGSYCTVCISSQVGCRMGCTFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ ++ F RNL E++ Q++ + I NVV+MG+GEPL N NNV+ + Sbjct: 123 ASTKENFKRNLTSGEMLNQIYLIENDLNL-------TINNVVIMGIGEPLDNYNNVIGFL 175 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 +I+ + G LS R +T+ST G+V + KL D + + L ISLH P + R EI+PI+ Sbjct: 176 KIINSEKGKNLSLRNITISTCGLVHNIYKLADEKLPITLTISLHNPFQKERREIMPISDN 235 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 ++I+ L A + Y +K++ RV+ EY ++ ND EHA +L +LK C IN+IP Sbjct: 236 FSIDEILKACKYYFDKTSR---RVSFEYTIIKGQNDSREHALELKNILKGLNCHINIIPL 292 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 N S I F +L +YG +RK +GDDI+ ACGQL V++ Sbjct: 293 NSIKEFDGVAPSTKYIYSFKSMLENYGINATIRKKQGDDINGACGQLRQGVLEEEN 348 >UniRef50_B1ZVM5 Ribosomal RNA large subunit methyltransferase N 2 n=2 Tax=Opitutaceae RepID=RLMN2_OPITP Length = 428 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 124/376 (32%), Positives = 186/376 (49%), Gaps = 35/376 (9%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 NL D R ++R + P A ++ ++Y + F MT++ +R +L+ Sbjct: 51 APTNLYDFTRAELRLWLSRRELNPVHAARIWSYLYLDLVEGFGAMTELPARVRARLEAEM 110 Query: 76 EIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCS 133 + ++ E S DG T K+ + + D +ETV + RAT CVSSQVGCA+ C FC+ Sbjct: 111 CVGNLKIARETDSRDGFTRKYLLELADGAAIETVLMRFAGRATACVSSQVGCAMGCVFCA 170 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVG----------------------------AAKVT 165 T Q G+ R+L EI+ Q A+ + + Sbjct: 171 TGQMGYTRHLTAGEIVAQAVHVARALRTAAFEKCHVMRDPSPGREAGEKSRDEADRHRAP 230 Query: 166 GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GD 224 + N+V+MGMGEPL N V+ A++I+ DD G L R+TLST GVVP + +L + Sbjct: 231 PTPRLRNLVLMGMGEPLHNYEAVMRAVDILRDDGGLALGAERITLSTVGVVPGILRLAAE 290 Query: 225 MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDH 284 V LA+SLHA + E R +VP+ KK+ ++ +AA R Y E + RV E+ +++ Sbjct: 291 KRPVHLAVSLHAADQEERAALVPVAKKWPLDELMAACRTYSETTGR---RVFYEWTLIEG 347 Query: 285 VNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL-MSYGFTTIV 343 ND HA + LL+ P ++NLIP NP G RF ++L + + V Sbjct: 348 RNDTAAHARAVGRLLRGLPAQVNLIPLNPTAGYDGTPGRTEAARRFQEILSREFALPSTV 407 Query: 344 RKTRGDDIDAACGQLA 359 R+ RG DI A CGQLA Sbjct: 408 RQRRGIDIAAGCGQLA 423 >UniRef50_A9S1C9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S1C9_PHYPA Length = 433 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 145/375 (38%), Positives = 213/375 (56%), Gaps = 12/375 (3%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC--CDNFDEMTDINKVL 67 K++L D+ ++ + + G K RA + + +Y ++ + +NK Sbjct: 65 AAGRAPRKVSLKDMTFPELERWVESHGHKASRAAMLWRHLYGNGKWVESPAVIPRLNKEF 124 Query: 68 RGKLKEVAEI-RAPEVVEEQRSSDGTIKWAIAVG--DQRVETVYIPED-DRATLCVSSQV 123 L+E AE ++ + + DGT K + VETV IP R T+CVSSQ+ Sbjct: 125 VSLLEERAEFAPNLQLRDVHTARDGTRKLVFFLEEYGASVETVVIPGPRGRVTVCVSSQI 184 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCA+ C+FC TA+ G NL ++I+ Q+ A++IV +TNVV MGMGEPL Sbjct: 185 GCAMNCQFCFTAKMGLRGNLSTAQIVEQLVVASRIVSKDLGH----VTNVVFMGMGEPLH 240 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRD 243 N+++V+ A EIM++D G LS R+VT+STSG+VP + K + ALA+SL+A D+IRD Sbjct: 241 NIDSVIRAAEIMVNDKGLHLSPRKVTISTSGLVPQIRKFCRSSECALAVSLNATTDDIRD 300 Query: 244 EIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP 303 +I+PIN+KYNI T L V+ ++ V +EYVML +VND E A +L EL+KD P Sbjct: 301 QIMPINRKYNIRTLLDCVKE-EMITHRPGESVFLEYVMLKNVNDSEEDATRLIELVKDIP 359 Query: 304 CKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 CKINLI +N PG+ + + + RF + G +R +RGDD ACGQL G V+ Sbjct: 360 CKINLIMFNSHPGSAFEPTPLVEVLRFRDRVADAGLVVHIRNSRGDDEKMACGQL-GTVL 418 Query: 364 DRTKRTLRKRMQGEA 378 R+ R ++ MQ A Sbjct: 419 PRSPRRRKQEMQEPA 433 >UniRef50_UPI000050FC81 radical SAM enzyme, Cfr family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FC81 Length = 410 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 134/406 (33%), Positives = 205/406 (50%), Gaps = 52/406 (12%) Query: 4 QLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDI 63 L+ ++ K +L D+ + + K++G FRA Q+ + + + + MTD+ Sbjct: 6 PLLNFKSPRASQPKQHLADMTMDERIDAVKEMGLPAFRAKQISTHYFSHYQTDVESMTDL 65 Query: 64 NKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSS 121 K LR L+E V R+++G TIK+ + D VE+V + +R TLCVSS Sbjct: 66 PKDLRADLQERFFPHLLTEVRRLRTANGDTIKFLWRLYDGALVESVLMRYRNRVTLCVSS 125 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT---------------- 165 Q GC + C FC+T QQG RN+ +EI+ QV RA +++ A ++ Sbjct: 126 QCGCGMNCPFCATGQQGLTRNMSAAEIVEQVIRANQVIAAGELAPAPTSDMPAEGETALG 185 Query: 166 -------------------------GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD-- 198 G ++N+V MGMGEPL N V+ A+ ++ Sbjct: 186 AEADDEQGETSEATVDESGTSTSATGPERVSNIVFMGMGEPLANYKRVMNAVRRFVEPAP 245 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 G G+S RR+T+ST G+VP ++KL + I V A+SLHAP+DE+RDE++P+N ++ + Sbjct: 246 QGLGMSARRITISTVGLVPGINKLAAEDIPVTFALSLHAPDDELRDEMIPVNTRWKADEA 305 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPF 314 + A Y + + RV+IEY ++ +ND A LA+ L +N IP NP Sbjct: 306 IDAAYNYYQVTGR---RVSIEYALIKDMNDHPWRAELLAKKLNARGRGWVHVNPIPLNPT 362 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 PG+ + S D F + L+ G T +R TRG DID ACGQLA Sbjct: 363 PGSVWTASEPEVADEFVRRLIDQGIPTTIRDTRGSDIDGACGQLAA 408 >UniRef50_C1SKY4 23S rRNA m(2)A-2503 methyltransferase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKY4_9BACT Length = 357 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 127/359 (35%), Positives = 201/359 (55%), Gaps = 11/359 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 I L +N+ ++ F G + FRA Q+ KW+Y ++ EMTD++ R KL + Sbjct: 2 PENIYLDSMNKFELENFVISQGMQKFRAIQIHKWVYRRGAESVAEMTDLSIADREKLLGM 61 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFC 132 A+ V + ++S+ DG++K+ ++ D +E V + + R T C+SSQVGC + C FC Sbjct: 62 AKFTVMNVADVRKSAMDGSVKFLFSLEDGETIEAVVLNDGRRLTACISSQVGCRMGCAFC 121 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 STA+ G RNL + EII QV R + + + + N+V MGMGEPL NL+NV A+ Sbjct: 122 STAKMGLRRNLTMGEIIKQVKRLNEYL----ASEGTKLNNLVFMGMGEPLDNLDNVKNAI 177 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKK 251 ++LDD G+G S +++TLST G+ L++L V LA+S++A + E R ++P++ K Sbjct: 178 NVLLDDDGYGFSHKKITLSTCGLTDRLEELFAMDTPVNLAVSVNAADQETRKGLMPVSNK 237 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT-PCKINLIP 310 Y + + +++ + + +TIEYV+L VND + A +LA+LL+ KINLI Sbjct: 238 YPLSGLMDVLKKLPLQ---KRKSITIEYVLLRGVNDTLDDARKLAKLLRGLDKVKINLIT 294 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRT 369 +N A Y S +F + L+S +RK+ G DI+ ACGQL + K Sbjct: 295 YNSGGDAGYLPPSEKDTLKFQEYLISNKIGVFIRKSLGRDIEGACGQLRAKHDESQKSE 353 >UniRef50_Q0F1H4 Radical SAM superfamily protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1H4_9PROT Length = 357 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 135/355 (38%), Positives = 196/355 (55%), Gaps = 13/355 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC--CDNFDEMTDINKVLRGKLKEVAEI 77 L +N Q+ G P AD++ ++ + + + D+ LR L E + Sbjct: 7 LNGMNHDQLLALCGAAGVSPAHADRLRAAIFRHYGSDTDINNTPDLPLRLRSYLAEHTAL 66 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 P DGT K +A+ D R VETV IP + R T C+S+QVGCA+ C FC TA Sbjct: 67 LQPASTATSEGEDGTRKLLLAMADGREVETVLIPGNGRLTQCISTQVGCAVGCTFCLTAT 126 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G RNL +E++ +V +I R + N+V+MGMGEPL N + V + + Sbjct: 127 AGLTRNLTAAEMVAEVTAGQRI-------SGRQVRNLVLMGMGEPLHNYDEVAHFVRLAT 179 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 D G S RVTLSTSG+VPA+ ++ D + LA+SL+A ND +RD I+PIN+KY I Sbjct: 180 DPKGMAFSPNRVTLSTSGLVPAMQRMIRDELPCNLAVSLNATNDAVRDTIMPINRKYPIA 239 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 L VR Y+ RV IEYV+LD +ND A +L EL+ C +NL+P+N +P Sbjct: 240 MLLDTVREYIRV--RGNKRVLIEYVLLDGINDSQADAIRLCELMAGMGCTVNLLPFNAYP 297 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTL 370 G P+ R +++ + F +L+ G T+VR+++G DI AACGQL +V+ R K + Sbjct: 298 GLPFQRPADAAVSAFRAILVEAGIITVVRESKGRDIAAACGQLKTEVVQRRKASR 352 >UniRef50_B9HMI5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HMI5_POPTR Length = 441 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 131/391 (33%), Positives = 201/391 (51%), Gaps = 33/391 (8%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE-IR 78 LL ++ ++++ DLG++ +R Q+ +Y + + + V R L+E + Sbjct: 55 LLGMSEPELQQLATDLGQQSYRGKQLHHLIYQRKVKEIQDFSQLPLVFRNDLQEAGWKVG 114 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----RATLCVSSQVGCALECKFC 132 + + ++DGT+K I + D R +ETV IP +D R T CVSSQVGC L C FC Sbjct: 115 RSPIFQTVTAADGTVKLLIRLEDNRLIETVGIPVEDEKGSMRLTACVSSQVGCPLRCSFC 174 Query: 133 STAQQGFNRNLRVSEIIGQV-----------------WRAAKIVGAAKVTGQRPITNVVM 175 +T + GF+RNL+ EI+ Q A+++ ++ +TNVV Sbjct: 175 ATGKGGFSRNLQRHEIVEQHRLGSSGTTSTCSKLYLHVLYAQVLAVEEIFKH-RVTNVVF 233 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISL 234 MGMGEP+LNL +V+ A + D + +R +T+ST GV + KL + LA+SL Sbjct: 234 MGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASHKLQSTLALSL 291 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 HAPN ++R+ IVP K Y ++ + + Y +++ RV+ EY +L VND EHA + Sbjct: 292 HAPNQKLRETIVPSAKSYPLDAIMKDCKEYFLETSR---RVSFEYALLAGVNDRVEHAKE 348 Query: 295 LAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDID 352 LAELL +NLIP+NP G+ Y R I F+ VL S T VR+TRG D Sbjct: 349 LAELLHQWGRGHHVNLIPFNPIQGSDYKRPHKKAIQAFAAVLESRKVTVSVRQTRGLDAS 408 Query: 353 AACGQLAGDVIDRTKRTLRKRMQGEAIDIKA 383 AACGQL + ++ + ++ Sbjct: 409 AACGQLRNEFQKSPLVINSDSLESQPENVAV 439 >UniRef50_C0QZJ2 Predicted Fe-S-cluster redox enzyme n=2 Tax=Brachyspira RepID=C0QZJ2_BRAHW Length = 342 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 121/352 (34%), Positives = 195/352 (55%), Gaps = 14/352 (3%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 KI++++++ ++ +F + F A Q++ W+Y +F+EM++I K LR L E Sbjct: 2 AKKISIMNVSEDELSKFCVENNFPKFHASQILNWIYKKYAVSFEEMSNIPKNLRNLLDEY 61 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCS 133 I ++ GT K I++ D +++E+V + + DR T C+SSQVGC C FC+ Sbjct: 62 YFIHNSKIETISEDEYGTQKLLISLYDKKKIESVILNKKDRVTFCLSSQVGCGYGCAFCA 121 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 T G +RNL EI+ + + + + ++V MGMGEPL N N+ A++ Sbjct: 122 TGSMGLSRNLTADEILAEFLLMRAV--------TKKVNSIVFMGMGEPLANTKNLFKAID 173 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKY 252 + GF L R +T+STSG V + +L + +D LA+SLH+ +++RD+I+PINK+Y Sbjct: 174 TINSFKGFNLGIRHITISTSGEVAGIKQLIERDLDCRLAVSLHSLKNDVRDKIMPINKRY 233 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 IE +A ++RY S + +T E+V++ VND A++L L K+ P K+N+IP N Sbjct: 234 PIENLMAILKRY---SRNGKRMITFEWVLIKDVNDSVNDAYRLVNLKKEFPFKVNVIPMN 290 Query: 313 PFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 P AP R + I RF +L G + R +G +I A CGQLA + Sbjct: 291 PVEHAPELQRPNKDIILRFKSILKDNGIEVVERFKQGQEILAGCGQLAVKNM 342 >UniRef50_C9RKM0 Radical SAM enzyme, Cfr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKM0_FIBSS Length = 357 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 117/355 (32%), Positives = 189/355 (53%), Gaps = 9/355 (2%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 N+ L +++ + +D+ EKP+RADQ+ KW++ ++DEM +I+ LR K+ + + Sbjct: 5 RNIKTLTTDELKAWLRDVDEKPYRADQIQKWLFCQQVRSYDEMVNISPALREKMAKQFTL 64 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 + + S DGT+KW D +ETV IP + R ++CVS+QVGCA+ C FC TA+ Sbjct: 65 CGLKEDQRSVSVDGTVKWLFETEDGHHIETVMIPANGRYSVCVSTQVGCAMNCAFCRTAK 124 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAA----KVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 GF RNL EI+ ++ + + G +TN++ MGMGEPL NL NV Sbjct: 125 MGFTRNLEAGEILEEIINVNWYLKDNGFMNEEGGVAQVTNIIFMGMGEPLNNLENVHRVC 184 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKK 251 + + F + +R+T+STSGVVP + +L D LA+SL++ N+E R ++P+NK Sbjct: 185 CTLHNQKLFNMGAKRMTVSTSGVVPKIKELVDRNTPCCLAVSLNSTNNEYRSSVMPVNKT 244 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + IE L AV Y+ +++ VT E+V++ ++ + A +L + K+N I Sbjct: 245 WPIEKLLEAVDEYIRRTDNY---VTFEFVLIQNITCTPKAAKELIRICAPRRVKVNAIVL 301 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 N + ++ F + + +R RG DI AACGQLA + Sbjct: 302 NDGDDPTLHAPTPEEVEDFLAAVRAAEIQITIRNPRGRDILAACGQLAYKKEGKE 356 >UniRef50_A0LV48 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Acidothermus cellulolyticus 11B RepID=RLMN_ACIC1 Length = 430 Score = 366 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 142/388 (36%), Positives = 204/388 (52%), Gaps = 33/388 (8%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRG 69 VT + +L D + + R + +LGE FRA Q+ + +N DEMTD+ R Sbjct: 28 AVTRRGVPRHLADFSLAERRRWVAELGEPSFRAVQISAHYFGRLTENPDEMTDLPASSRR 87 Query: 70 KLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPE---------------- 111 +L V V E +G T K + D VE+V + Sbjct: 88 ELVGVLLPPLLRPVRELACDNGLTRKILWRLSDGAYVESVLMRYPPRHSRHAALGAEADA 147 Query: 112 -----DDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG 166 R TLCVSSQ GC + C FC+T Q G RNL +EI+ QV AA+ V ++ G Sbjct: 148 DGGSRHGRVTLCVSSQAGCGMGCPFCATGQAGLVRNLSAAEIVAQVAVAARTVARGEMAG 207 Query: 167 QR-PITNVVMMGMGEPLLNLNNVVPAMEIMLDD--FGFGLSKRRVTLSTSGVVPALDKLG 223 ++NVV MGMGEPL N +VV A+ + + G G+S+R VT+ST G+VPA+++L Sbjct: 208 GPGRLSNVVFMGMGEPLANYRSVVDAVRRITEPPPEGLGISQRSVTVSTVGLVPAIERLA 267 Query: 224 -DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 + + V LA+SLHAP+DE+R+ +VPIN+++ + L A RY E + RV++EY ++ Sbjct: 268 TEGLAVTLAVSLHAPDDELRNVLVPINRRWPVRDVLGAAARYAEVTKR---RVSVEYALI 324 Query: 283 DHVNDGTEHAHQLAELLK---DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGF 339 VND A LA +K +NLIP NP PG+P+ S+ F + L + G Sbjct: 325 RDVNDQPWRADALAAQVKEFLGRLGHVNLIPLNPTPGSPWTASTPRAQAEFVRRLAAAGV 384 Query: 340 TTIVRKTRGDDIDAACGQLAGDVIDRTK 367 T VR TRG +++ ACGQLA V R + Sbjct: 385 TVTVRDTRGREVNGACGQLAATVEFRGR 412 >UniRef50_A9FFJ6 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RLMN_SORC5 Length = 389 Score = 366 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 129/382 (33%), Positives = 182/382 (47%), Gaps = 45/382 (11%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVE 84 ++ GE+ F A QV +W++ + MT++ LR L Sbjct: 13 PEEWSASLAARGERSFTAKQVFQWIHRRGVLDPAAMTNLPARLREHLAAEGLGEVLTPER 72 Query: 85 EQRSSDGTIKWAIAVGDQ-RVETVYIPEDD------------------------------ 113 RS DGT K + + D +ETV +P Sbjct: 73 VHRSEDGTRKLLLRLRDGATIETVLLPSVSGPGSQAQLDADAAAALDDDEDDDAAAEAGA 132 Query: 114 ----RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 R T C+S+QVGCA+ C FC++ G R+L EI GQV ++ Sbjct: 133 APRVRVTQCISTQVGCAMGCGFCASGVAGLKRHLGAEEIAGQVLLGRAMLEE-----GEE 187 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM--ID 227 + NVV MGMGEPL N ++ ++ G LS RRVT+STSG+VP + +LG Sbjct: 188 LRNVVYMGMGEPLHNYEATARSLRLLTHPEGINLSTRRVTVSTSGLVPEIARLGADFGGQ 247 Query: 228 VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVND 287 +ALAISLHA +DE R ++PIN+K+ ++ LAA+R Y R+TIEY ++ ND Sbjct: 248 IALAISLHAADDETRSALMPINRKHPLDELLAALRAYPLPRRR---RITIEYTLVAGQND 304 Query: 288 GTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTR 347 A +LA+LL+ P KINLIP NP + G + R+ F +VL G++ VR+ R Sbjct: 305 DPAEARRLAKLLRGLPVKINLIPMNPIEASSLGPPAQERVAAFQEVLTQAGYSCFVRRRR 364 Query: 348 GDDIDAACGQLAGDVIDRTKRT 369 GDD+ AACGQL R Sbjct: 365 GDDVSAACGQLVLLGAKPKVRR 386 >UniRef50_UPI0001C31CDE radical SAM enzyme, Cfr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CDE Length = 329 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 132/343 (38%), Positives = 186/343 (54%), Gaps = 20/343 (5%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 ++ + D + FRA QV +W ++EMT++ LR L E + + Sbjct: 1 MDLDLLDRTLADEDQPRFRAKQVWEWT-ARGAAGYEEMTNLPAALRATLAERVPFSSLTL 59 Query: 83 VEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-RATLCVSSQVGCALECKFCSTAQQGFN 140 E +SDGT+K + D R VE V + D R +LC+SSQ GC L C FC+T F Sbjct: 60 QHEAHASDGTVKALFSTHDGRAVEAVLMRYKDGRRSLCLSSQSGCPLTCTFCATGTMKFG 119 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 RNL SEI+ Q +I + + V MGMGEP++NL++V+ A + Sbjct: 120 RNLTASEILDQALHFRRI---------EEVDHCVFMGMGEPMMNLDHVLAACRALPS--- 167 Query: 201 FGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 G++ RR +ST G +P +++L D + + LA+SLHAP++ +R +I+P+N +Y + L Sbjct: 168 IGITHRRTAISTVGWIPGIERLTDSEMPIRLALSLHAPDEALRSQIMPVNDRYPLRDVLR 227 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPY 319 A R + EK V IEYVML VNDG A QLA LL+ K+NLIP+NP + Y Sbjct: 228 ACRDFYEKKRR---MVFIEYVMLGGVNDGYAQALQLARLLEPWMFKVNLIPYNPTD-SIY 283 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 SS I+ F VL +G + VR TRG DIDAACGQLA Sbjct: 284 DGSSREAIETFRAVLEEHGISATVRLTRGRDIDAACGQLAVKA 326 >UniRef50_B0S143 Ribosomal RNA large subunit methyltransferase N n=2 Tax=Finegoldia magna RepID=RLMN_FINM2 Length = 349 Score = 363 bits (932), Expect = 5e-99, Method: Composition-based stats. Identities = 122/360 (33%), Positives = 202/360 (56%), Gaps = 15/360 (4%) Query: 15 DGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 KI L ++ +++EFF + GEKPFRA Q + ++ N DEMT+ + LRGKL + Sbjct: 2 QNKIILENMTVDELKEFFVNNGEKPFRALQYFQAIHKNRIFNPDEMTNFSNSLRGKLNQY 61 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFC 132 +I+ +++ S D T K+ I + D + ETV++ ++C+S+Q+GC + CKFC Sbjct: 62 NDIKNCSIIKRIDSKLDNTKKYLIEMSDGNIVETVFMQYKTHTSICLSTQIGCKMGCKFC 121 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ ++ F RNL+ E+ Q++ + I N+V+MG+GEPL N +NV + Sbjct: 122 ASTKKSFVRNLQPYEMCAQIYLVENDLDI-------RINNIVLMGIGEPLDNYDNVSRFI 174 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 +++ D G +S R +TLST G+V + +L D I + + ISLH P D R++++PI K Sbjct: 175 DLITDKDGQDMSIRNITLSTCGLVDKIIRLANDDIGINITISLHNPFDNERNKLMPIGNK 234 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y+IE L A Y +K+ R+ EY ++++VND ++ +L LLK+ C +NLI Sbjct: 235 YSIEEILDACDYYFKKTKR---RIGFEYTVIENVNDSKKYMDKLVSLLKNRNCLLNLITL 291 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 NP ++ F + + T +R+ +G DID ACGQL + + TKR ++ Sbjct: 292 NPIEEFNQKSPDRYKMTEFMEYMNKNNVNTTIRRKQGIDIDGACGQLRIN--NMTKRGVK 349 >UniRef50_B7FZP4 Predicted protein (Fragment) n=2 Tax=Bacillariophyta RepID=B7FZP4_PHATR Length = 378 Score = 360 bits (924), Expect = 5e-98, Method: Composition-based stats. Identities = 128/383 (33%), Positives = 192/383 (50%), Gaps = 30/383 (7%) Query: 4 QLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDI 63 T +T + +NL + + ++ G +RA QV W+ + MT++ Sbjct: 1 TESTTSLASTSNRVLNLSTVTQAELEILMVAWGHPKYRAQQVYNWIRQQGVTDVALMTNL 60 Query: 64 NKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-RATLCVSS 121 K LR +L E ++ R+ E+ E S DGTIK A D + +E+V +P D R T C+SS Sbjct: 61 PKTLRAQLSEFSKPRSLEIAAEMVSKDGTIKRAYRCADGQMIESVLMPYKDGRYTACISS 120 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG--------------AAKVTGQ 167 Q GCA C FC+T Q GF R L EI QV A + + Sbjct: 121 QAGCAQGCVFCATGQMGFARQLTADEIFEQVAIFANELQQQKDQQQYIDAGGQEIQHGRA 180 Query: 168 RPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG---D 224 ++NVV MGMGEPL N NVV A+ + +D G+ R++T+ST G+VP + KL D Sbjct: 181 TRLSNVVFMGMGEPLANYRNVVKAVNRITND--LGIGARKITVSTVGIVPNIVKLTTDPD 238 Query: 225 MIDVALAISLHAPNDEIRDEIVPINKKY-NIETFLAAVRRYLEKSNANQGRVTIEYVMLD 283 M + LA+SLH +D+ R +++P N++Y ++ + A+R Y+E + R+T+E+ ++ Sbjct: 239 MPPIRLAVSLHCASDKERSDLLPANRRYGGLDELMPALRDYIETTGR---RITLEWALIQ 295 Query: 284 HVNDGTEHAHQLAEL-----LKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYG 338 ND + A LA L L+ +N+IP NP G + ++ F K L +G Sbjct: 296 GENDNADSARTLASLVQRYGLRRDMVHVNVIPLNPTGGFEGTPTQRQNVNVFVKTLEEHG 355 Query: 339 FTTIVRKTRGDDIDAACGQLAGD 361 R RG DIDA CGQL Sbjct: 356 IACTPRVRRGIDIDAGCGQLTSK 378 >UniRef50_B0MQA1 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQA1_9FIRM Length = 345 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 108/351 (30%), Positives = 180/351 (51%), Gaps = 19/351 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQ---VMKWMYHYCCDNFDEMTDINKVLRGKLKEV 74 ++ L +Q + + G FRA Q + + +Y FDEMT + ++ L + Sbjct: 2 TDIYSLTYEQAEKLLTENG---FRATQCANIFRDIYKRRASGFDEMTLTSADIKAFLSDK 58 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCS 133 ++ E +S D T K+ + D RVETV + + ++C+S+Q GC + CKFC Sbjct: 59 YFFGKLKIDEILQSVD-TSKYLFELSDGCRVETVLMRQKFGNSICISTQSGCNMGCKFCC 117 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 + + R+L E++ Q+ K I N+ +MG+GEP N + + ++ Sbjct: 118 SGRLRKQRDLTAGEMVSQILAVEKHQNI-------TIGNITVMGIGEPFDNYDALCDFLD 170 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKY 252 I+ G + +T+ST G+ + LA+SLHAP+DEIR+ ++P+N++Y Sbjct: 171 IVTVPGGIETGTKHITVSTCGLCDKTKLFAERKEPCNLAVSLHAPDDEIRNRLMPVNRRY 230 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 +I + + + Y+E++N +V +EY++LD +ND E+A QLA L+ + +NLIP+N Sbjct: 231 SISQVIESAKYYVERTNR---KVLLEYILLDGINDSRENARQLAALIGNARLFVNLIPYN 287 Query: 313 PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 P P + + RSS I F L RK G ++ AACGQL D I Sbjct: 288 PSPDSEFKRSSEENITAFYDELKKNRINVTRRKEFGTELSAACGQLRSDRI 338 >UniRef50_C7NGZ4 Radical SAM enzyme, Cfr family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NGZ4_KYTSD Length = 426 Score = 356 bits (913), Expect = 8e-97, Method: Composition-based stats. Identities = 139/407 (34%), Positives = 196/407 (48%), Gaps = 54/407 (13%) Query: 5 LVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDIN 64 +T +L DL+ ++ D G FRA+Q+ K + D MTD+ Sbjct: 16 ELTFAAPRRGKPPQHLADLDPAGRKQAVTDAGWPAFRANQLSKHYFERYTDEPAAMTDLP 75 Query: 65 KVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQ 122 K R ++ + V R+ DG T+K + D VE+V + +R TLC+SSQ Sbjct: 76 KAGREEMVRGLMPQLLTPVSVMRADDGATVKTLWRLHDGALVESVLMRYPNRVTLCLSSQ 135 Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG---------------- 166 GC + C FC+T QQG RNL +EI+GQ+ A +++ + G Sbjct: 136 AGCGMNCPFCATGQQGLTRNLSTAEIVGQLVAANRMLNDPEAPGLAPPPALAEGQVELGE 195 Query: 167 ---------------------------QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 + NVV MGMGE L N V A+ M+D Sbjct: 196 NDADPSLDAGADEVEDASLDTPLAAGGPHRVHNVVFMGMGEALANYRKAVDAVRRMVDPA 255 Query: 200 --GFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 G G+S R +T+ST G+VPA+DK + + LA+SLHAP+DE+RDE+VPINK++ ++ Sbjct: 256 PAGLGMSARGITMSTVGLVPAIDKFAAEGVAATLALSLHAPDDELRDELVPINKRWKVDE 315 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNP 313 L A RY E + RV+IEY ++ +ND A LAE L +N IP NP Sbjct: 316 ALDAAYRYFETTGR---RVSIEYALIRDMNDQAWRADLLAEKLNARGRGWVHVNPIPLNP 372 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 PG+ + S +F + L + G T VR TRG DID ACGQLA Sbjct: 373 TPGSKWTASRPGVEQQFVERLRAGGIPTTVRDTRGSDIDGACGQLAA 419 >UniRef50_Q7V010 Ribosomal RNA large subunit methyltransferase N n=8 Tax=Prochlorococcus marinus RepID=RLMN_PROMP Length = 348 Score = 356 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 119/355 (33%), Positives = 193/355 (54%), Gaps = 23/355 (6%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFDEMTDINKVLRGKLK-EV 74 NLL + + + + + G+ FR Q+ W+Y + DE+ + R +LK E Sbjct: 2 KNLLGCSVKDLEKIALNYGQAAFRGRQIYNWLYNYKNRSKSIDEINVLPLKFRDQLKNEA 61 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCS 133 + E+ ++DGT+K + D VE V IP + R T C+SSQVGC ++CKFC+ Sbjct: 62 FLFGELTLKEKYLATDGTLKLLLNTRDNESVECVGIPTEKRLTACLSSQVGCPMDCKFCA 121 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 T ++G R+L+VSEI+ Q+ + + ++N+V MGMGEPLLN++ ++ ++ Sbjct: 122 TGKEGLKRSLKVSEILDQILFIENQMN-------QKVSNIVFMGMGEPLLNIDELLLSIR 174 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-------DVALAISLHAPNDEIRDEIV 246 + +D F +S+R++T+ST + + KL ++ LAISLHA N +IR+ I+ Sbjct: 175 SINED--FAISQRKITVSTVAIPKMISKLSELSFQVLGKCQFTLAISLHASNQKIREAII 232 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 P K Y+I+ + R Y+ ++ RV+ EY+ML VND EHA +L+ L+K C + Sbjct: 233 PSAKNYHIKNIIDDCREYVRETGR---RVSFEYLMLHGVNDKLEHADELSNLIKGFQCHV 289 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 NLI +N + ++ F L + G RK+RG D +AACGQL + Sbjct: 290 NLIQYNHIEEVEFKQTPIKNAQLFQTRLSNSGINVSFRKSRGSDRNAACGQLRQN 344 >UniRef50_B0VIB4 Putative radical SAM-dependent enzyme (YfgB) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIB4_9BACT Length = 350 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 125/354 (35%), Positives = 198/354 (55%), Gaps = 10/354 (2%) Query: 18 INLLDLNRQQMREFFKDL--GEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 N+ L + + + +R QV+ W+Y + + ++MT++ + R LK Sbjct: 3 TNIFSLMPEDLAKSIISRQPDLPEYRIKQVLSWLYKFYLNEPEKMTNLPEEFRAFLKTNY 62 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKFCST 134 PE+ + S DG +K+ + + D ++ E+V IP + + TLC+S+QVGCA CKFC+T Sbjct: 63 SFFLPEIESKLVSQDGAVKYRLLLEDGKIIESVLIPAEKKNTLCLSTQVGCARNCKFCAT 122 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + G RNL EIIGQV A+K + K +G +TN+V+MGMGEP+ NL NV+ A++I Sbjct: 123 GKMGLIRNLATQEIIGQVIIASKEL---KNSGTAKLTNLVLMGMGEPMDNLKNVLMALQI 179 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 + + GF S RR+T+ST GVVP + L D I LA+SL + R +++P++ +YN Sbjct: 180 LQSNAGFSFSPRRITVSTCGVVPGIIALADSGIKAKLALSLTSAIQSKRRKLMPVSDQYN 239 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + A+ YL K++ R+TIEY+++ + N +E L + D CKIN IP+NP Sbjct: 240 LIQLKQALLYYLRKTS---FRITIEYILIPNFNMDSEDLAALRKFTGDLSCKINFIPYNP 296 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 +P+ + + I F + +RK+RG DI ACGQL + + K Sbjct: 297 GRNSPFRAPTETEIKDFMQRAQKLPQAITLRKSRGADIFGACGQLTKNNLGEKK 350 >UniRef50_D1VSE2 Radical SAM enzyme, Cfr family n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE2_9FIRM Length = 348 Score = 353 bits (906), Expect = 6e-96, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 184/348 (52%), Gaps = 15/348 (4%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L + +++++ EK FRA+Q+ + + + + ++++K L+ EI Sbjct: 3 LNSMYLDELKDYLSSKSEKSFRANQLYTFFHKNKRWDIEN-SNLSKSTLKILQND-EINT 60 Query: 80 PEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 ++++ +S D T K+ + D +E V + + C+S+QVGC + C FC++ + Sbjct: 61 IKILKIFQSKLDDTKKFLFTLDDSNVIEGVLMKYSFGYSQCISTQVGCRMGCAFCASTKD 120 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G RNL +E++ QV+ G + N ++MG GEPL N +NV+ ++I+ Sbjct: 121 GLFRNLTPAEMLNQVYIVENYFGIN-------VKNFILMGSGEPLDNFDNVIKFLKILHS 173 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 G S R +T+ST GVV + KL D + + LA+SLH ND R +I+PIN+KYN+ Sbjct: 174 KEGHNTSYRNITISTCGVVDGIYKLIDSALPINLAVSLHQTNDLERSKIMPINRKYNLNK 233 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 A+ Y K+ R+T EY ++ ND ++ ++L E+ ++ C INLIP NP Sbjct: 234 LKKALEDYNLKTKN---RITFEYTLIKGKNDTLKNVNELKEMFQNLFCHINLIPLNPIEE 290 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 R + I++F ++L F VR+ G DIDA+CGQL ++ Sbjct: 291 YNEQRPNRQDINKFKRLLEDASFNVTVRRELGSDIDASCGQLRASLLR 338 >UniRef50_C1F813 Radical SAM enzyme, Cfr family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F813_ACIC5 Length = 396 Score = 353 bits (905), Expect = 7e-96, Method: Composition-based stats. Identities = 139/376 (36%), Positives = 199/376 (52%), Gaps = 41/376 (10%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEV-AEIR 78 L L+ +++ E D P+R QV +Y ++ E+T + + LR L++ Sbjct: 27 LFGLSFEELSEALADFRLPPWRLRQVRHALYRQWAASWSEVTTLPQELRESLEKAGFAPG 86 Query: 79 APEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPED------------------------- 112 P +VE RS DGT ++ IA D Q VETV++P Sbjct: 87 LPGIVETFRSVDGTERYLIAGHDGQTVETVWMPGGDGGEAGDGSGSDGAGDDRPGEDSGE 146 Query: 113 ---DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 RAT+CVSSQ+GCA+ C+FC TA+ G RNL EI GQV + +V R Sbjct: 147 AAYQRATICVSSQIGCAVNCQFCLTARLGIIRNLTAGEIAGQVVAV---LKRQQVEMGRD 203 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DV 228 N+V MGMGEP LN + + A+ ++ D+ G + R+T+STSG+VP + + + Sbjct: 204 RINLVFMGMGEPFLNYDAFMDAVRLLSDEVG--IPVSRMTVSTSGIVPGILRFAEEPVRP 261 Query: 229 ALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDG 288 LAISL+AP+D +R+ ++PIN+K++I L AVR+ + RVT EYV+L VND Sbjct: 262 KLAISLNAPDDIVREAVMPINRKWDIAEVLDAVRKVPL---RAKERVTFEYVLLGGVNDQ 318 Query: 289 TEHAHQLAELLK--DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKT 346 EHA +A LL+ + P K+NLI WNP P PY + F + L+ G +R+ Sbjct: 319 PEHAETVARLLRRANLPLKVNLIVWNPGPDVPYTMPKAEDVAAFQEYLVGKGVPAYIRRP 378 Query: 347 RGDDIDAACGQLAGDV 362 RG DI AACGQL V Sbjct: 379 RGRDIYAACGQLKRTV 394 >UniRef50_B1ZQZ5 Ribosomal RNA large subunit methyltransferase N 1 n=3 Tax=Verrucomicrobia RepID=RLMN1_OPITP Length = 355 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 123/353 (34%), Positives = 182/353 (51%), Gaps = 15/353 (4%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 + +L +L+ + G K A +V++ Y C + + L +L+ Sbjct: 2 RPSLAELSVDDLASVLAQWGYKRSHAGRVLREYYARCGELTEAGRPWPAGLLERLRIEFA 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPE--DDRATLCVSSQVGCALECKFCS 133 + Q ++DGT K + + D R VE V +P+ DRA C+SSQVGCA+ C FC+ Sbjct: 62 PGGTALAARQVAADGTTKLLLRLADGRTVEAVLMPDYRADRAAGCLSSQVGCAMGCDFCA 121 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 TAQ GF RNL E++ Q + + R + VV MGMGEPLLNL+ V+ A+ Sbjct: 122 TAQSGFERNLTAGEMVEQFLALRR----EAASAGRKLQTVVFMGMGEPLLNLDAVLTAVR 177 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKY 252 + D+ GL R+VT+ST G+VP +D L + + LA+SLHAP+D R ++P +++ Sbjct: 178 RIADNTYGGLGWRQVTVSTVGLVPGIDALTAADLGINLAVSLHAPDDATRAALLPAGRRF 237 Query: 253 NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWN 312 I LAAV R+ V I+Y +L VND HA LA ++ +NL+ +N Sbjct: 238 AIADILAAVDRFQASRGRP---VIIQYCLLKGVNDSAAHARMLAAVIGSRRMHVNLLHYN 294 Query: 313 PFP----GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P G Y S + +F L + G T +R++RG DIDAACGQL Sbjct: 295 PTGLSLRGVRYEPSGDEAAAQFLAELRARGVVTHLRRSRGPDIDAACGQLRAK 347 >UniRef50_Q1AYW0 Ribosomal RNA large subunit methyltransferase N n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RLMN_RUBXD Length = 355 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 118/342 (34%), Positives = 176/342 (51%), Gaps = 12/342 (3%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVE 84 ++ E + GE P+R QV + +DE+ + K LR +L E+ Sbjct: 19 LPEVEEVLAERGEPPYRLRQVYAALAGSLASGWDEVASLPKGLREELAGRVPASVLELRR 78 Query: 85 EQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNL 143 R+ DGT K+ D +ETV IPE R T+C+S+QVGC + C FC+T G RNL Sbjct: 79 ISRARDGTRKYLFFTRDGHAIETVMIPERSRRTVCISTQVGCPMACTFCATGLLGIKRNL 138 Query: 144 RVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 + EI QV+ A+ + +TNVV+MGMGEP LN + A+ ++ D GF L Sbjct: 139 KAREIAEQVFAVARDI------APERVTNVVVMGMGEPFLNYRETLRALRVLNDRRGFNL 192 Query: 204 SKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 + R + +STSG+V + + D LAISLH P +E R ++P+ ++ I + A R Sbjct: 193 AARHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERRRLMPVAARHPIPELMNAAR 252 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRS 322 Y+E++ ++ EY +L VND HA LAELL +NL+ +N + + + Sbjct: 253 YYVERTRR---KLFFEYTLLAGVNDRMRHAEALAELLDHPLYHLNLLRFN-WTDTGFSAT 308 Query: 323 SNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 S R F + G + +R +RG DI+AACGQLA Sbjct: 309 SARRAKEFLRRARELGLSATLRPSRGQDIEAACGQLAARDAR 350 >UniRef50_B2KDX7 Radical SAM enzyme, Cfr family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDX7_ELUMP Length = 343 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 185/351 (52%), Gaps = 15/351 (4%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +N +++++F K+ G +R QV +Y ++++ + L+ KLK+ I + Sbjct: 1 MNFEKIKDFIKENGFPAYRIAQVKDAVYKNGITDWNKAVALPADLKNKLKDNFNILSFTA 60 Query: 83 VEEQRSS-DGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 + Q S D T K + + D ++ETV + D T+CVS+QVGC + C FCST + F Sbjct: 61 AKMQFSDKDRTAKALLKLEDGLKIETVLMRMGDVWTVCVSTQVGCPVGCSFCSTGKMRFK 120 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 R+L EI QV + K+ + I NVV MGMGEPL N N V A++ + + Sbjct: 121 RDLTDEEISDQVLFWLSYIKQEKLA--QRINNVVFMGMGEPLFNYLNTVKAVKEISNPDR 178 Query: 201 FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 G+ R +++STSGV L D+ V LA+SLH+ +D+ R++IVP+N+K+N+ET Sbjct: 179 LGIGMRHISISTSGVADKFHNLAVDLPQVNLALSLHSADDDERNKIVPLNRKFNLETLQK 238 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP----CKINLIPWNPFP 315 A+ Y+ + +V IEY +++ VND EH L + + +NLI N Sbjct: 239 ALTEYIAMTGR---QVFIEYTVVEGVNDRPEHIRLLGKWISGVKDNYLLHVNLIACNMGK 295 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 G +S ++ F+K L + +RK+ G+DI AACGQLA Sbjct: 296 G---KTTSEKQVKLFAKGLQGLHISVTIRKSLGNDILAACGQLAVKESKEK 343 >UniRef50_A6DSV2 YloN n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSV2_9BACT Length = 345 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 189/350 (54%), Gaps = 13/350 (3%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +NR++++ + FRA Q+ + + + +FD++T+ K LR KL E ++ V Sbjct: 1 MNRERIQTIVDEYKLPKFRAKQLKEAFFEHHYSSFDQLTNFPKDLRNKLTEENQVLCLTV 60 Query: 83 VEEQRSSDG-TIKWAIAVGDQ-RVETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQGF 139 + SSD T K + + D ++E+V + P+ T C+SSQVGCA++C FC+T G Sbjct: 61 NKVFASSDQVTYKALLELHDGLKIESVLMSPKPGLWTACISSQVGCAMKCSFCATGTMGL 120 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL EI QV + + + + NVV MGMGEPL N V ++E + + Sbjct: 121 TRNLTSEEISDQVLFWRQFIAKNDIDTD-RLNNVVYMGMGEPLHNTKEVFSSIEELTAED 179 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F + R +++STSG++ + ++ + V LA+SLHA DE+R I+PINK +++E Sbjct: 180 SFKIGSRHISVSTSGLLKGVKEMAEKFPQVNLALSLHAAKDELRSSIMPINKAFDLEKIR 239 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP----CKINLIPWNPF 314 + Y++ ++ +V IEYV+L+ N+ HA +L++ LK NLI +N Sbjct: 240 TCLDEYIDSTHR---KVFIEYVLLEGENNELSHAVELSKFLKSLKRPELTHTNLIVYNET 296 Query: 315 PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 + + S+ + D+F L S G + +RK G DID ACGQLA + Sbjct: 297 D-SEHKGSTKQKADQFRNHLKSKGLSVTIRKNLGRDIDGACGQLAVKEEN 345 >UniRef50_C7M235 Radical SAM enzyme, Cfr family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M235_ACIFD Length = 353 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 128/348 (36%), Positives = 190/348 (54%), Gaps = 17/348 (4%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 ++ +L+R +R +R +Q+ +YH + ++ + +R +L + Sbjct: 3 SVYELDRAAVRALVP---WPDWRIEQLFHGLYHEGQR-LEAISTLPARMRAELASHLDPG 58 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 E E T+K+A+ D VETV + R ++CVSSQ GCA+ C+FC+T Q Sbjct: 59 LTERRREHADDGETVKFALEAADGALVETVVMQSARRISVCVSSQAGCAMGCRFCATGQA 118 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF R+L V EI+ Q+ A + V R +T+VV MGMGEPL N + + A+ + Sbjct: 119 GFVRHLGVGEIVEQLAIAQRSVR------PRRLTHVVFMGMGEPLANASVAIEAIRRIRA 172 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 D FG+S RRVT+ST G+VP + +L + V LA+SLHA ND R ++VP+N++Y I+ Sbjct: 173 D--FGISPRRVTVSTVGIVPGIRRLAHADLGVTLAVSLHAANDAARSDLVPMNRRYGIDA 230 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 L A + + E + RVT+E+ ++ VND A +LA + +NLIP NP PG Sbjct: 231 VLDAAQEFSELTGR---RVTLEWALIAGVNDRDRDATELAGHARRLAAHVNLIPLNPTPG 287 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 P + + RF++ L S G VR TRG IDAACGQLA DV Sbjct: 288 YPMVGTDPDGVARFARRLRSLGVNVTVRDTRGRSIDAACGQLAADVAR 335 >UniRef50_D1R7C7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7C7_9CHLA Length = 364 Score = 346 bits (888), Expect = 7e-94, Method: Composition-based stats. Identities = 123/357 (34%), Positives = 188/357 (52%), Gaps = 18/357 (5%) Query: 16 GKINLLDLNRQQ-MREFFKDLGEKPFRADQVMKWMYHYCCDNFD-EMTDINKVLRGKLKE 73 KI++L + + + LG+ A + + + N + + +R + E Sbjct: 3 EKISILAHTEESFIHAIAERLGKGRVHASLIYQEFFRSGSLNAAHPAFNNAQEIRTAILE 62 Query: 74 VAEIRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKF 131 + + + + DG T K+ D VE V IP TLC+SSQVGC + C F Sbjct: 63 NVSVSQLSLGDRK--EDGKTGKFLGKTADGLEVEFVQIPMQSGGTLCISSQVGCQMGCAF 120 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C T + G RNL EI+ QV+ A + N+V MGMGEPL N + V+ A Sbjct: 121 CETGKMGLLRNLTTEEIVSQVYLAKHHNQFS-------FRNLVFMGMGEPLDNFDAVMQA 173 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID--VALAISLHAPNDEIRDEIVPIN 249 + I D GFG +RR+T+STSG V +DKL ++ LA+S++AP DE+R+ ++P+N Sbjct: 174 VRIFNDPKGFGFGRRRMTISTSGCVDGIDKLANLGGQAPNLAVSINAPTDELRNRLMPVN 233 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 +KY+++T A++ Y K+ ++ I YV+L ND EHA QL+E LK KINLI Sbjct: 234 RKYDLQTLYEAMQGYCTKTGR---QILIAYVLLQGQNDQIEHALQLSEYLKGLNVKINLI 290 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 P+NP + + I+ F++ L G+ T++R T+G DI AACGQL + + Sbjct: 291 PYNPQSRDRFQAPDLNTIEAFTQSLRQKGYYTLLRLTKGQDIMAACGQLGNLKLRKQ 347 >UniRef50_B3DX07 Radical SAM family enzyme n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX07_METI4 Length = 314 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 111/309 (35%), Positives = 173/309 (55%), Gaps = 19/309 (6%) Query: 80 PEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDD------RATLCVSSQVGCALECKFC 132 E++ E++S DGT K+ + D +ETV IP D R TLCVS+QVGCAL C FC Sbjct: 1 MELIHEKQSIDGTKKFLWQLCDGHAIETVLIPATDSRGSSERLTLCVSTQVGCALGCHFC 60 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 ++ GF RNL EI+ QV + IV + ++++V MGMGEPLLN + ++ ++ Sbjct: 61 ASGLLGFKRNLSCGEIVEQVLLSESIVK-------QRVSHIVFMGMGEPLLNYDQLIKSI 113 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 ++ +G G+S R++T+STSG+ P + KL + + LA+SLHA DE+R +I+PIN K Sbjct: 114 RLISSSWGIGISPRKITISTSGIAPRIRKLALETLPFRLAVSLHATTDELRSKIMPINSK 173 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + + + + + + ++T+EY+++ +ND E A +LA + K+NLIP+ Sbjct: 174 YPLSELIKSCEEFC---SRRKQKITLEYILISGLNDRREDAERLARIATSLRAKVNLIPY 230 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLR 371 NP + F + L + +RK RG DID ACGQL + + Sbjct: 231 NPIERLAWKSPDQKEQLSFFRWLKNKAVQVSIRKERGRDIDGACGQLRLRYLFE-RSKEP 289 Query: 372 KRMQGEAID 380 K M GE ++ Sbjct: 290 KGMLGEGLN 298 >UniRef50_D1N5Y0 Radical SAM enzyme, Cfr family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5Y0_9BACT Length = 344 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 172/349 (49%), Gaps = 13/349 (3%) Query: 16 GKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 + L+ + +RE+ K FR Q+ W+Y + M ++ +R + Sbjct: 2 SRPFLVGTSPAVLREWAKSHDLPAFRGTQIADWVYKKGIVEPERMNNLPLPVRELIGNEF 61 Query: 76 EIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCST 134 V E S DGT K + + D +E V IP ++R T C+S+QVGC ++C+FC++ Sbjct: 62 LAPGTAVTETAGSGDGTEKLLLTLQDGETIEMVLIPAEERLTFCLSTQVGCPVQCRFCAS 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + G RNL EI+ + R N+V MG+GE LLN + +E+ Sbjct: 122 GRDGLIRNLAAGEILEEFLLGC-------SRAGRRPDNLVFMGIGEGLLNFRELAATLEV 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 + GFG+S RR+T+STSG VP + K + + LAISLHAP+DE R ++P +Y Sbjct: 175 LSSPEGFGMSPRRITVSTSGYVPGMLKFAELEREFTLAISLHAPDDETRSRLIPDKLRYP 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 + +AA YL K+ VT+EY +L+ ND HA L L CK+NLIP+N Sbjct: 235 VAEIMAAADLYLRKAGR---MVTLEYTLLEGFNDTPPHARALGALAVRHRCKVNLIPYNS 291 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 G + R S I F + + + G VR RG AACGQL Sbjct: 292 TGG-EFRRPSRQAIREFEETVAAAGAHVTVRVERGAKSVAACGQLRTRA 339 >UniRef50_B1H070 Ribosomal RNA large subunit methyltransferase N n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RLMN_UNCTG Length = 350 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 126/353 (35%), Positives = 210/353 (59%), Gaps = 18/353 (5%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 ++ K +LDLN Q K + E+ +R +Q+++W+Y +F+ T+I K LR KL E Sbjct: 6 QNYKKYILDLNDAQFNRAVKPIIEQDYRINQIIEWIYAKKAVSFESFTNIPKELRNKLDE 65 Query: 74 VAEIRAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKF 131 +R ++V++++S D TI++ D++ V++P + + ++C+SSQ+GC + C F Sbjct: 66 KFFLRTLKIVKKEKSLIDSTIRYTFRTADKKYFFAVFLPANGKNSVCISSQIGCPIMCAF 125 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 CS+ + RNL EII Q+ + I+ ++ MGMGEP+LN NN++ Sbjct: 126 CSSGKTKLARNLSRGEIIEQILQVENDTK-------EKISGILFMGMGEPMLNFNNLISV 178 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI-DVALAISLHAPNDEIRDEIVPINK 250 + +L FG+ KR +T+S+ G+VPA+ KL D V LA+SLHA ++ R ++VP N Sbjct: 179 LNSLLSSKEFGIGKRHITVSSVGIVPAVKKLADDNFGVRLALSLHAVDERQRKKLVPDNL 238 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-----DTPCK 305 ++IE L A + YL+K+N++ +TIEYV++ +N + AH+LA LLK ++ + Sbjct: 239 GFSIEDILKAGKYYLKKTNSH---LTIEYVLVKGINISSADAHKLARLLKRCDLINSDVQ 295 Query: 306 INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 +NLIP+NP + R I++F +L G T VR+++G +I+AACGQL Sbjct: 296 VNLIPFNPVTDVQFQRPDKKSINKFKSILKLNGITVNVRQSKGANINAACGQL 348 >UniRef50_A8I3K8 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I3K8_CHLRE Length = 368 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 176/364 (48%), Gaps = 35/364 (9%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFDEMTDINKVLRGKLKEV 74 ++ L +L ++ E+ +GE P RA Q+ +W+Y N D+ G K Sbjct: 1 RVMLKNLPLPELEEWCASVGEPPKRAKQLYRWLYGNRKWIRNLDQADSDASAFSGAFKAK 60 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQ-------------RVETVYIPEDDR------A 115 ++ + DGT K A+ VETV IP +R Sbjct: 61 VLAGGLQLQSVHTARDGTRKLVFALVGDWEGGDGPAGSARGTVETVLIPMTNRQGQNLRY 120 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 T C+S+QVGCA+ C+FC T + G NL ++I+ QV A + + +V PI N+V Sbjct: 121 TACLSTQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRYLAEQEVQ--IPIANIVF 178 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLH 235 MGMGEPL N + V+ A+EI+ G LS+ ++ +ST G+VP + + LA+ Sbjct: 179 MGMGEPLHNYDAVMSAIEILA--TGLELSRNKIIVSTVGLVPEMRRFIASGRAKLAV--- 233 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG-RVTIEYVMLDHVNDGTEHAHQ 294 RD IVP N++Y ++ L A+R V IEYV+L VND A + Sbjct: 234 ------RDWIVPTNRRYPLDQLLGALREAFPYGKRKGDDFVVIEYVLLAGVNDTLADAER 287 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 L L D C +NLI +NP G + RSS+ + F V ++ G VR ++GDD AA Sbjct: 288 LLALTSDIYCLVNLIVFNPHDGTQFKRSSDDDVRAFRAVFLAAGRPCTVRASKGDDEMAA 347 Query: 355 CGQL 358 CGQL Sbjct: 348 CGQL 351 >UniRef50_Q6MED6 Ribosomal RNA large subunit methyltransferase N 1 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RLMN1_PARUW Length = 358 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 117/357 (32%), Positives = 184/357 (51%), Gaps = 18/357 (5%) Query: 17 KINLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA 75 I++L + +LG+ A V + + N + K + L+ + Sbjct: 5 PISILSHTSESYANAISHELGKGFQHAKLVYQEWFRRG--NISGLNPAFKNAQALLQNIL 62 Query: 76 EIRAPEVVEEQRS-SDG-TIKWAIAV-GDQRVETVYIPEDDRATLCVSSQVGCALECKFC 132 + + ++ +DG T K+ I D +++V IP TLC+SSQ+GC + C FC Sbjct: 63 SLTDFSFLPISQNLTDGQTGKFLIKTIDDLDIKSVLIPMQAGGTLCISSQIGCQMGCAFC 122 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 T + G RNL EI+ Q++ A + + + N+V MGMGEP N + V+ A Sbjct: 123 ETGRMGLLRNLTTQEILSQLFIAKFRLHFS-------VRNIVFMGMGEPFDNYDTVMHAF 175 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM--IDVALAISLHAPNDEIRDEIVPINK 250 I+ D GFGL R+T+STSG + + +L LA+SL+APNDE+R++++PINK Sbjct: 176 RILTDSHGFGLGNNRITISTSGCLEGIYRLLQETTPLPNLAVSLNAPNDELRNKLMPINK 235 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 KY ++ A+ + ++++ +V I YV++ ND EHA QL L KINLIP Sbjct: 236 KYPLKELYQAIYDFCKQTS---KQVLIAYVLIKEQNDSIEHAKQLTNFLSGLNVKINLIP 292 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 +NP + S ++ F+ L GF T++R+T+G I AACGQL + R K Sbjct: 293 YNPQSRDRFQSPEQSTLENFTSYLREKGFYTLLRQTKGQKIMAACGQLGNLELKRKK 349 >UniRef50_A4RXU8 Predicted protein n=2 Tax=Ostreococcus RepID=A4RXU8_OSTLU Length = 369 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 130/370 (35%), Positives = 194/370 (52%), Gaps = 31/370 (8%) Query: 18 INLLDLNRQQMREFFKDL-GEKPFRADQVMKWMY-HYCCDNFDEMTDINKVLRGKL-KEV 74 +LL ++ + ++ D G+ +RA Q+ + +Y C ++ + I + +R L Sbjct: 11 KDLLGMSARALKSIVVDECGQPLYRATQIREHLYGARRCRRIEDFSLIPREMRDALVAGG 70 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPE----------DDRATLCVSSQV 123 V S GT K ++ VG++ +E V IP+ ++R T CVSSQV Sbjct: 71 YRTGRLAVESASVSGCGTGKVSLRVGEREVIEAVGIPDASCWRASAEAENRLTACVSSQV 130 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCA++C FC+T QG+ RNL +EI QV ++ + ++ VV MGMGEP+L Sbjct: 131 GCAMKCTFCATGMQGYKRNLTPAEITAQVIELEEL-------YGKRVSQVVFMGMGEPML 183 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIR 242 N+ +VV A+ + +D G + R +T+ST G+ +L KL + + + LAISLHAP+ R Sbjct: 184 NIKSVVQAIRCLNEDVG--IGGRHITVSTVGIPNSLKKLAKEKLAITLAISLHAPDQHTR 241 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-- 300 +IVP K Y +E L R Y +++ RVT EY +L VND A L+ +LK Sbjct: 242 AKIVPSAKYYPMEDLLNDARAYFKETGR---RVTFEYTLLAGVNDSPSQAKALSRMLKRK 298 Query: 301 -DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 T +N+IPWN G + R S + I RF L G T +R+TRG D +AACG L Sbjct: 299 FGTGAHVNIIPWNNIDGINHTRPSGNAIHRFCAQL-EGGVTHTIRRTRGLDTNAACGMLT 357 Query: 360 GDVIDRTKRT 369 G RT R Sbjct: 358 GAFERRTLRA 367 >UniRef50_C1E6J0 Predicted protein n=2 Tax=Micromonas RepID=C1E6J0_9CHLO Length = 395 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 138/364 (37%), Positives = 182/364 (50%), Gaps = 26/364 (7%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMY-HYCCDNFDEMTDINKVLRGKLKEV-AEI 77 LL L ++RE + +R Q+ +Y + M + R L + E Sbjct: 42 LLGLGLDELRELSAEFALPQWRGQQIHDAIYGEMRKTTIEGMQQLPLGFRQALVDAGYET 101 Query: 78 RAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIP------EDDRATLCVSSQVGCALECK 130 E VE DGT K + +E V IP R T+CVSSQVGCA+ C Sbjct: 102 GRREPVEIVSDEDGTRKALFELRCGSIIEAVGIPVERAKGRRRRFTVCVSSQVGCAMRCS 161 Query: 131 FCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVP 190 FC+T +QGF RNL EI+ QV + R TNVVMMGMGEPLLNL V+ Sbjct: 162 FCATGRQGFRRNLTSDEIVNQVLSMEDVF-------GRRATNVVMMGMGEPLLNLREVLR 214 Query: 191 AMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPIN 249 A + D G + R T+ST GV AL KL + LA+SLHAP E+R+ ++P Sbjct: 215 AHRCLNRDVG--IGGRYFTISTVGVPNALSKLAAHRLQATLAVSLHAPTQELRERLIPSA 272 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK---DTPCKI 306 K + ++ L VR Y + + RVT EY +L ND +HA LA+LL+ C I Sbjct: 273 KAFPLDALLEEVRMYRKATGR---RVTFEYTLLAGENDSEDHARALAKLLRSKVGRGCHI 329 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVL-MSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365 NL+PWNP GA + R S S ++RF VL G + VR TRG AACGQL G + Sbjct: 330 NLLPWNPVAGANHQRPSKSAVNRFCDVLAAERGVSYSVRATRGLVAQAACGQLTGAFERK 389 Query: 366 TKRT 369 + R+ Sbjct: 390 SSRS 393 >UniRef50_C8PSX7 Radical SAM enzyme, Cfr family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSX7_9SPIO Length = 348 Score = 340 bits (872), Expect = 5e-92, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 174/343 (50%), Gaps = 17/343 (4%) Query: 22 DLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPE 81 + +++ + F++ Q+ +W+ C +F EMT++ R +L V R Sbjct: 16 GMLPEEIATVCNL--PQRFQSVQIFQWI-ARGCTSFAEMTNLPLKERERLASVYTPRNTV 72 Query: 82 VVEEQRSSDGTIKWAIAVGD-QRVETVYI-PEDDRATLCVSSQVGCALECKFCSTAQQGF 139 + DGT+K I + D +ETV + + +R T CVS QVGC + C FC T Q G Sbjct: 73 CETVLKDPDGTVKLGIGLYDGSSIETVLLFDKHERRTACVSCQVGCPMGCTFCQTGQLGC 132 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL +EI+ Q KI G + N+V MGMGEPLLNL+++ + ++ Sbjct: 133 LRNLSPNEIVEQFLHLEKICG--------KLDNIVFMGMGEPLLNLDSIAKTIAVLTHPK 184 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G LS RR+TLSTSG+ + +L + +D+ LA+SL ++ +R ++P+ K + Sbjct: 185 GRNLSHRRITLSTSGICKGIYELAERQLDIRLAVSLTTADEALRTTLMPVTKANPLSELK 244 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 A+R + +K+ RVT+E +L VN + A Q+ + + INLIPWNP P Sbjct: 245 KAIRYFNDKT---DKRVTLELALLKDVNTSYKAAQQVRDFAEGLNVHINLIPWNPVQQLP 301 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 Y S+S I F L + VR+ RG I ACGQL Sbjct: 302 YSTPSDSEIRSFYNYLTAENLNVTVRQKRGRTIGGACGQLGKK 344 >UniRef50_A9V4C5 Predicted protein n=2 Tax=Fungi/Metazoa group RepID=A9V4C5_MONBE Length = 1527 Score = 338 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 123/365 (33%), Positives = 189/365 (51%), Gaps = 42/365 (11%) Query: 33 KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGT 92 + LG ++ + + H N ++ ++ K L ++E + +V+E+ S+D T Sbjct: 592 RQLGIADDHVWRMWRAILHNGVTNVRDIPELPKKLYQVIEEKFALTTSRLVKEETSADNT 651 Query: 93 I-KWAIAVGDQ-RVETVYIPED-------------------------DRATLCVSSQVGC 125 K I + D ++ETV + +RAT+CVSSQVGC Sbjct: 652 TTKLLIELQDGAQIETVIMRYGRFELRNFPEDAQKKSSDGEVSFVSKERATVCVSSQVGC 711 Query: 126 ALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNL 185 + C FC+T G NL EI+ Q++ A ++ I NVV MGMGEPL N Sbjct: 712 QMGCTFCATGTMGLMSNLAAGEILEQLYHANQV---------EKIRNVVFMGMGEPLDNY 762 Query: 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDE 244 + V A+ M D F L ++++ST GVVP + ++ + DV LA+SLHAPN E+R+E Sbjct: 763 DAVRFAVSAMTDVRRFSLGASKISVSTVGVVPRIHQMVEDMPDVGLALSLHAPNQELREE 822 Query: 245 IVPINKKYNIETFLAAVRRY----LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 IVP + ++++ + A+ + E S + + IEYV++D VN E AHQL LLK Sbjct: 823 IVPSGRSWHLDRIMEAIDHFQETRQETSRRRRTHILIEYVLIDEVNSTEEVAHQLGHLLK 882 Query: 301 DTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 D +N+IP+NP Y S + DRF++++ SYG TI+R+ G D++AACGQL Sbjct: 883 DRDVLVNVIPYNPTDVPHDYKPPSRATTDRFNEIVRSYGLRTIIRQELGQDVNAACGQLV 942 Query: 360 GDVID 364 Sbjct: 943 VRSQR 947 >UniRef50_C0QD94 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QD94_DESAH Length = 342 Score = 337 bits (864), Expect = 4e-91, Method: Composition-based stats. Identities = 107/353 (30%), Positives = 182/353 (51%), Gaps = 19/353 (5%) Query: 18 INLLDLNRQQMREFF-KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK--EV 74 +NLL++ +++ + G + A +++ + NF + + L Sbjct: 1 MNLLEMTFKEVSQLLYNGFGRGDYHAGALLREVIKRGNHNFSTAPEFERSQGMSLALVSD 60 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCS 133 E+ VV+ Q D T+K+ + D +E+V IP TLCVS+Q GC + C+FC Sbjct: 61 YELPDFTVVD-QMEEDNTVKFVTRLHDGCSIESVIIPMKQYNTLCVSTQAGCRMGCRFCE 119 Query: 134 TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAME 193 TA+ GF RNL+V EI GQ++ A + + I+N+V MGMGEP N +N+V ++ Sbjct: 120 TARSGFKRNLQVHEITGQLFSARNTL-------GKKISNIVFMGMGEPFDNFDNLVRSIR 172 Query: 194 IMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI--DVALAISLHAPNDEIRDEIVPINKK 251 + D GF ++ R +T+ST G+VP + L + ++LA+S+H+ DE+R ++P+N++ Sbjct: 173 VFNDQKGFDVAFRHMTVSTCGLVPGIRALAGLGLTQLSLAVSVHSAIDEVRSVLMPVNRR 232 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 Y + AA+ Y + +EYV++ VND E A L + L ++NLI + Sbjct: 233 YPLNVLRAALADYPLHKRRY---ILVEYVLIKGVNDSQEAAAALVQYLVPLKVRVNLIAY 289 Query: 312 NPF--PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDV 362 NP P + + +++F+ L G I R ++G + A CGQL+ Sbjct: 290 NPGRDPDPEFQGVDDCSMNQFASWLEDSGLFVIKRWSKGQKLMAGCGQLSTRT 342 >UniRef50_B1C5S5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S5_9FIRM Length = 342 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 119/353 (33%), Positives = 186/353 (52%), Gaps = 17/353 (4%) Query: 18 INLLDLNRQQMREFFKDL-GEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 NL LN +++ + + E FRA Q+ KW+Y + DEMT+++ LR KLKE Sbjct: 2 TNLFGLNLEEIEKIIVEEYKEPKFRAKQIFKWLYDSYVKSIDEMTNLSLSLREKLKEEYY 61 Query: 77 IRAPEVVEEQRSSDG-TIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCST 134 I ++ ++ + T K+ + D +E V + + ATLCVS+Q GC + C FC + Sbjct: 62 INHLKLEKKFKEEKSSTTKFLLKTEDDILIECVLLRYEAGATLCVSTQAGCRMGCVFCES 121 Query: 135 AQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEI 194 + G RNL EI+ +++ ++I I+N+V+MG GEPL N + VV +++ Sbjct: 122 GKCGLIRNLTKGEILNEIYLVSEIEDI-------RISNIVLMGSGEPLDNYDEVVGFLKL 174 Query: 195 MLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYN 253 + D +SKR +TLST G+ + L D +D+ LA+SLHAP E+R+ ++PI K N Sbjct: 175 VTDVNTLNMSKRSITLSTCGIKDKIYSLADSGLDINLALSLHAPFHEMRESMMPIEKANN 234 Query: 254 IETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP 313 IE L A Y K+ R+T EY +++ ND E +L +L K T IN+I N Sbjct: 235 IEEVLDATFYYRSKTGR---RITYEYCLIEGKNDTIECIDKLYDLFKGTDSLINVIGVN- 290 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 + R ++ I F L + G +R+ G I+AACGQL ++ Sbjct: 291 --DSSKKRVNDKYIHAFVDKLRNKGINVTIRRRLGSSINAACGQLKSRYLNEE 341 >UniRef50_A8I8N2 Predicted Fe-S-cluster redox enzyme n=1 Tax=Chlamydomonas reinhardtii RepID=A8I8N2_CHLRE Length = 502 Score = 335 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 116/386 (30%), Positives = 180/386 (46%), Gaps = 53/386 (13%) Query: 13 TKDGKINLLDLNRQQMREFFKDLGE--KPFRADQVMKWMYHY-----CCDNFDE----MT 61 + G++ L L ++ + GE RA Q+ +WMY + +E Sbjct: 88 DQQGRLVLKALTLPELEAWCAAQGEAAPANRALQIWRWMYADPPAGSWVRSLEETMGRQN 147 Query: 62 DINKVLRGKLKEVAEI-RAPEVVEEQRSSDGTIKWAIAV-----GDQRVETVYIPEDDRA 115 K+ + ++ + R+SDGT K + +ETV IP Sbjct: 148 GFAAKFVEKVGPHVSLEGGLKLSQVVRASDGTRKLVFTLLGGEAAGGSIETVLIP----- 202 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 VGCA+ C+FC T + G NL ++I+ QV A + + + P+TN+V Sbjct: 203 ------VVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRFLAQE--GDRTPLTNLVF 254 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLH 235 MGMGEPL N V+ A +I+ G +S ++T+ST G+VP + + V +A+SLH Sbjct: 255 MGMGEPLHNTEAVLAAADIVSHYLGLHISHNKITISTVGLVPEMRAVLARTRVQVALSLH 314 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNAN-----------------------Q 272 A DE+RD IVP+N++Y++ T AA+ K Sbjct: 315 ATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEEEAAIGSLSSSDEAAAAAAGKGSSKEG 374 Query: 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSK 332 + +EY ML +ND + AH+LA++L+ CK+NLI +NP G + S++ I F Sbjct: 375 RSLLVEYTMLHGINDTLDDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRS 434 Query: 333 VLMSYGFTTIVRKTRGDDIDAACGQL 358 L+ G +R +RGDD AACGQL Sbjct: 435 ALIRSGMVCTIRDSRGDDEMAACGQL 460 >UniRef50_C1EAY2 Predicted protein n=3 Tax=Eukaryota RepID=C1EAY2_9CHLO Length = 485 Score = 335 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 128/381 (33%), Positives = 179/381 (46%), Gaps = 34/381 (8%) Query: 10 NVTTKDGKINLLDLNRQQMREFFKDLGEKPFR---ADQVMKWMYHYCCDNFDE------- 59 K + +L +R + F +D G P R A + + + H + + Sbjct: 2 APARKLTRTSL--FDRSALVAFLED-GLGPKRKDAAAKHCRAILHAAVRDAEAGLDAVNL 58 Query: 60 ----MTDINKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPED- 112 + I K R ++ E + + + Q S DG T K + + D RVE+V + D Sbjct: 59 SESRVPGIPKFARDQIPERFALITTTIADCQTSKDGSTTKMVVELQDGHRVESVVMRHDK 118 Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP--- 169 R TLCVSSQVGC + C FC+T G NL EI+ Q+ A ++ Sbjct: 119 GRVTLCVSSQVGCKMGCTFCATGTLGELGNLTSGEILEQLVHANRLFNDDGTGAGLRRVS 178 Query: 170 -----ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-G 223 + N+V MGMGEPL N + VV A+ M D F L+ RVT+ST GVVP + +L Sbjct: 179 GTAHGVRNLVFMGMGEPLNNYDAVVGAIGPMTDPNAFALAPSRVTVSTVGVVPKMRRLVR 238 Query: 224 DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLD 283 D V LA+SLHAPN +R++IVP Y + L+A+ YL + R IEY +L Sbjct: 239 DAPGVCLALSLHAPNQRLREKIVPTATAYKLPDILSALDEYLATG--PKVRTMIEYCVLG 296 Query: 284 HVNDGTEHAHQLAELLKDTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLM--SYGFT 340 VND TE A +L EL++ +NLIP+NP + + VL + Sbjct: 297 GVNDTTECARELGELMRHRDVIVNLIPYNPTATPMGHSPPKMEDVRAMCAVLTGPEFNQF 356 Query: 341 TIVRKTRGDDIDAACGQLAGD 361 T VR G DI ACGQLA Sbjct: 357 TTVRHEMGQDISGACGQLALK 377 >UniRef50_C7GZA9 Radical SAM enzyme, Cfr family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZA9_9FIRM Length = 342 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 98/350 (28%), Positives = 170/350 (48%), Gaps = 19/350 (5%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 +L +N +++ LGEK +RA Q+++ + + D+ D++ I+K R KL I Sbjct: 2 KSLAGMNLKEIESVVLSLGEKAYRAKQILEAV-NNGVDSIDKIHTISKDFRAKLSNKYTI 60 Query: 78 RAPEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + V ++ S DG+IK+ + D + +E + + +LC+SSQ GC + C FCS+ Sbjct: 61 SSITVEKKLVSKRDGSIKYLLKTSDGKFIEAMSMVYKHGVSLCISSQAGCRMGCTFCSSG 120 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 ++G RNL E+I QV + I+ +V+MG GEP N + + ++ + Sbjct: 121 KEGLERNLSAFEMIEQVLILKRGFD--------KISGIVVMGTGEPFDNYDELKKFLKRI 172 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNI 254 ++ + KR +T+ST G+ + K + LA SLHA +++IR +I+P NK ++ Sbjct: 173 TNEEFLRIGKRHITVSTCGIEEGIKKFSKDFRSINLAFSLHAASNDIRKKIMPGNK-LSV 231 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF 314 + + + + + RVT EY+++ VND L LK C +NLI N Sbjct: 232 DDIIGLASEHAKITRR---RVTFEYILIKGVNDSMAECELLCRKLKGINCLVNLIRLNGS 288 Query: 315 ---PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 + + ++ L +R+T G+DI ACGQL Sbjct: 289 SYEGDNRFSSPDMKTVKQWQNELEKRHIQVTIRRTIGEDIQGACGQLRLR 338 >UniRef50_B9EX01 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9EX01_ORYSJ Length = 363 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 124/355 (34%), Positives = 169/355 (47%), Gaps = 54/355 (15%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE-IR 78 LL L+ +R+ DLG++ +R Q+ +Y E + + KV R L + Sbjct: 36 LLGLSEPDLRQLAVDLGQQSYRGKQLHDLLYKSRAKQIQEFSHVPKVFREALVGAGWKVG 95 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDD-----RATLCVSSQVGCALECKFC 132 V +SDGT K + + D R +ETV IP DD R T CVSSQVGC L C FC Sbjct: 96 RSPVHHAVTASDGTTKILLKLEDNRLIETVGIPVDDDKGPSRLTACVSSQVGCPLRCSFC 155 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 +T + GF RNL EI+ QV + Q +TNVV MGMGEP+LNL +V+ A Sbjct: 156 ATGKGGFARNLHAHEIVEQVLAIEETF-------QHRVTNVVFMGMGEPMLNLKSVLEAH 208 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKK 251 + + + +R +T+ST GV + KL + LA+SLHAPN ++R+ IVP Sbjct: 209 RCLNKE--LKIGQRMITISTVGVPSTIKKLASHKLQSTLAVSLHAPNQKLRETIVPT--- 263 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK--DTPCKINLI 309 +ND EHA +LAELL +NLI Sbjct: 264 --------------------------------GINDAKEHAEELAELLHTCGGGYHVNLI 291 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 P+NP G+ Y R + F L + T VR+TRG D +AACGQL + Sbjct: 292 PYNPIQGSEYKRPYRKVVQAFVDALEARKITVSVRQTRGLDANAACGQLRNEFQK 346 >UniRef50_Q01GU0 Radical SAM domain-containing protein-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01GU0_OSTTA Length = 406 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 169/369 (45%), Gaps = 48/369 (13%) Query: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYC---CDNFDE 59 + + DG ++LL L ++++ + G FR Q+ +Y + DE Sbjct: 72 AEETLRRAKASADGGVSLLGLTKRELEALAVERGMPKFRGKQMADHLYAANGTSARSVDE 131 Query: 60 MTDINKVLRGKL-KEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLC 118 T ++K LR +L + V ++DGT K + + D RV Sbjct: 132 FTTLSKALRAELVAAGVRVGRSSVHHVAAATDGTAKLLLRLDDDRV-------------- 177 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 GF RNL EI+ QV + + +TNVV MGM Sbjct: 178 ---------------VETGGFARNLAPHEIVDQVLALEEHF-------GQRVTNVVFMGM 215 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAP 237 GEPLLN+ NV+ A E++ + G + R +T+ST GV +++KL + LA+SLHAP Sbjct: 216 GEPLLNVPNVLKAHEVLNKEIG--IGARHITISTVGVRGSIEKLAYAQLQSVLAVSLHAP 273 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 N E+R+ I+P K Y +E L +Y + RVT EY +L VND EHA +L Sbjct: 274 NQELRETIIPSAKVYPMEDLLQDCEQYFIATGR---RVTFEYTLLGGVNDQPEHAKELGR 330 Query: 298 LL--KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAAC 355 LL ++ +NLIP+NP A + R S + + F VL +R+TRG + AAC Sbjct: 331 LLYARNLASHVNLIPYNPVDDADFKRPSRATVYAFRDVLEQERVPASIRQTRGLEAAAAC 390 Query: 356 GQLAGDVID 364 GQL Sbjct: 391 GQLRNAYQK 399 >UniRef50_B2S216 Ribosomal RNA large subunit methyltransferase N n=3 Tax=Treponema RepID=RLMN_TREPS Length = 340 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 170/342 (49%), Gaps = 17/342 (4%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L L +++++ + FR QV +W+ C +F M+D++ R +L I Sbjct: 7 LSGLLPEEIQKVCAF--AERFRGVQVFRWI-AAGCTDFHAMSDLSSETRARLARACVISD 63 Query: 80 PEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPED-DRATLCVSSQVGCALECKFCSTAQQ 137 V R DGT+K I + D +RVE V + + R T C+S QVGC + C FC T Q Sbjct: 64 TRVYTTLRDVDGTLKLGIELKDKRRVEAVLLVDQVSRKTACLSCQVGCPMACAFCQTGQL 123 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 GF RNL SEI+ Q + VG + NVV MGMGEP+LNL+ V A+EI+ Sbjct: 124 GFARNLSASEIVEQFLHLERCVG--------TLDNVVFMGMGEPMLNLDAVCRAIEILSH 175 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIET 256 G LS++R+T+STSG + L D + V LA+SL N +R ++P ++ Sbjct: 176 PQGRDLSEKRITISTSGHCRGIYSLADRALQVRLAVSLTTANAPLRARLMPRAAHDSLAK 235 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPG 316 +A+R + EKS RVT+E ++ VN HA ++ + +NLIPWNP Sbjct: 236 LKSAIRYFNEKSG---KRVTLELALMRGVNTSERHAQEVIDFAHGLNVHVNLIPWNPVAS 292 Query: 317 APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + + F +LM R RG+ I ACGQL Sbjct: 293 IHFETPREVEVAHFEALLMRARIPVTRRYQRGNGIGGACGQL 334 >UniRef50_A7GH77 Ribosomal RNA large subunit methyltransferase cfr n=26 Tax=root RepID=CFR_CLOBL Length = 344 Score = 326 bits (837), Expect = 6e-88, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 169/341 (49%), Gaps = 23/341 (6%) Query: 28 MREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA--EIRAPEVVEE 85 M++ +L +R +Q+ K ++H DNFD+M + KVLR L + + V Sbjct: 11 MKQIVSNLKLPDYRYEQLTKAIFHQRIDNFDDMHILPKVLRMSLVNEFGKNVSSVIPVFS 70 Query: 86 QRSSDGTIKWAIAVGD-QRVETVYIPEDDRA-TLCVSSQVGCALECKFCSTAQQGFNRNL 143 Q S K + D +R+E V + + C+SSQ GC C+FC+T GF RNL Sbjct: 71 QDSKQ-AQKLLFELTDGERIEAVGLKYKQGWESFCISSQCGCGFGCRFCATGSAGFKRNL 129 Query: 144 RVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGL 203 EI Q+ + ++ MGMGE N + A++I+ D FGL Sbjct: 130 TADEITDQLLYF--------YFNDHRLNSISFMGMGEAFAN-PELFDAVKILTDQNLFGL 180 Query: 204 SKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 S+RR+T+ST G++P + L V LA SLH+P + R +++PINK++ + + + Sbjct: 181 SQRRITISTIGIIPGIQSLTQKFPQVNLAFSLHSPFESQRSDLMPINKRFPLNQVMKTLD 240 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-----CKINLIPWNPFPGA 317 ++ + RV I Y+ML+ +ND EHA + LLK+ I+LIP+N Sbjct: 241 EHIIHTGR---RVFIAYIMLEGINDSKEHAEAVVGLLKNRGSWEHLYHIDLIPYNSTDKT 297 Query: 318 PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 + S++ I +F L G + VR G +I AACGQL Sbjct: 298 TFKFQSSNAIKQFCSTLKKAGISATVRTQFGSEISAACGQL 338 >UniRef50_Q9LJN3 Gb|AAF41683.1 n=13 Tax=Magnoliophyta RepID=Q9LJN3_ARATH Length = 382 Score = 323 bits (827), Expect = 8e-87, Method: Composition-based stats. Identities = 133/376 (35%), Positives = 190/376 (50%), Gaps = 42/376 (11%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 + +++ F+ G P A Q+ K++ +DE+ + L + + Sbjct: 7 FDASEIKSEFESAGINPKFAIQIWKYVIQNPDCVWDEIPSLPSAAYSLLHSKFKTLTSSL 66 Query: 83 VEEQRSSDGTI-KWAIAVG-DQRVETVYIPEDDRA--------------TLCVSSQVGCA 126 SSDGT K I + VE V + D R TLC+SSQVGC Sbjct: 67 HSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCISSQVGCK 126 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMM---------- 176 + C FC+T GF NL EI+ Q+ A++I I N+V M Sbjct: 127 MGCTFCATGTMGFKSNLTSGEIVEQLVHASRIAD---------IRNIVFMLLPWFDDCDQ 177 Query: 177 GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLH 235 GMGEPL N N VV A+ +ML+ F LS +R+T+ST G+V A++KL D+ V+LA+SLH Sbjct: 178 GMGEPLNNYNAVVEAVRVMLNQP-FQLSPKRITISTVGIVHAINKLHNDLPGVSLAVSLH 236 Query: 236 APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQL 295 AP EIR +I+P + + ++ + A++ + + S Q ++ IEY+MLD VND +HAH L Sbjct: 237 APVQEIRCQIMPAARAFPLQKLMDALQTFQKNS---QQKIFIEYIMLDGVNDQEQHAHLL 293 Query: 296 AELLKDTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDA 353 ELLK INLIP+NP + + SS + RF K+L Y T +RK G DI Sbjct: 294 GELLKTFQVVINLIPFNPIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISG 353 Query: 354 ACGQLAGDVIDRTKRT 369 ACGQL + D K Sbjct: 354 ACGQLVVNQPDIKKTP 369 >UniRef50_B0SGA8 Ribosomal RNA large subunit methyltransferase N n=6 Tax=Leptospira RepID=RLMN_LEPBA Length = 353 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 115/352 (32%), Positives = 188/352 (53%), Gaps = 18/352 (5%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 L ++++ E LG + +RA Q+ +Y D+ T ++K +R KLKE + Sbjct: 8 LKGKTKKELEEICVSLGLEKYRAAQIYTGIYKSRYTTIDQFTTLSKEVREKLKEHTQYPE 67 Query: 80 PEVVEEQRSS-DGTIKWAIAVGDQR-VETVYIP--EDDRATLCVSSQVGCALECKFCSTA 135 E+ + S DGT K+ VG+ + +E V+IP + R T+C+SSQ+GC L CKFC+T Sbjct: 68 IEIGRDLVSKEDGTRKFTFYVGENKEIEAVWIPSGDGGRKTICISSQIGCTLNCKFCATG 127 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 + NL+ +I+ QV + ++VG TN+V MGMGEP+ N +V+ A I+ Sbjct: 128 LLEYKGNLQTWQILDQVLQVERLVGD-------RATNIVFMGMGEPMHNYFSVMKAAHIL 180 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNI 254 D FGL R+T+ST+GV +++ + AISL+ PN R ++ +N K+ + Sbjct: 181 RDKDAFGLGALRITISTAGVTTGINRFIENKEPFNFAISLNHPNPNARSSVMDVNDKHPL 240 Query: 255 ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT-PCKINLIPWNP 313 E + + +R+ + +T EYVM+ VN G ++A +LA++ + CKIN+IP N Sbjct: 241 EKLIDSAKRF---TKELDRAITFEYVMIPDVNMGRDNAERLAKIARSVNKCKINVIPLN- 296 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIV-RKTRGDDIDAACGQLAGDVID 364 + R ++ + F L + I+ R++ G DI+ ACG LA I Sbjct: 297 TDFTGWRRPTDDEVKDFVMHLKAKTTAPILNRRSPGRDINGACGMLALKGIR 348 >UniRef50_Q5WJ42 Ribosomal RNA large subunit methyltransferase cfr n=8 Tax=Firmicutes RepID=CFR_BACSK Length = 350 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 107/353 (30%), Positives = 175/353 (49%), Gaps = 22/353 (6%) Query: 25 RQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA--EIRAPEV 82 ++++ F L E +R Q+ + ++ + F++MT + K LR L I E Sbjct: 10 YERLKHFLNALNEPTYRYKQITEAIFKHRIGAFNKMTTLPKALRESLINEFGPSILTVEP 69 Query: 83 VEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRA-TLCVSSQVGCALECKFCSTAQQGFNR 141 V E S T G+ +VE V + + + C+SSQ GC L C FCST G + Sbjct: 70 VLETTSQQVTKVLLKVAGNNQVEAVRMHYEAGWESFCISSQCGCGLGCTFCSTGAIGLKQ 129 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 NL E+ Q+ + +V MGMGE L N+ + A+ +++D F Sbjct: 130 NLSADEMTDQLLYF--------YLKGHSLDSVSFMGMGEALANV-RIFDALNVLVDRQLF 180 Query: 202 GLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 LS RR+T+ST G++P + ++ + L SLH+P + R E++PIN KY ++ + Sbjct: 181 ALSPRRITVSTVGIIPNIQRMTSSFPQMNLTFSLHSPFHDQRSELMPINNKYPLDQVMNV 240 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE-LLKDTP---CKINLIPWNPFPG 316 + +++ ++ +V I YVML VND +HA L + +L + +NLI +NP G Sbjct: 241 LDQHIHETGR---KVYIAYVMLRGVNDSEKHAEALVKRILNNRYPHLYHVNLIRYNPTVG 297 Query: 317 AP--YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTK 367 P YG++ ++ F +V+ S +R G +IDAACGQL G + + Sbjct: 298 TPENYGQTIEEKLQTFYRVVKSARIPVTIRSQFGREIDAACGQLYGQYQAKKR 350 >UniRef50_A6DL87 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DL87_9BACT Length = 343 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 124/315 (39%), Positives = 175/315 (55%), Gaps = 13/315 (4%) Query: 56 NFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIP-ED 112 + D D K +++ EI +++ Q S DG K + D +ETV + Sbjct: 37 DLDSAFDNPK-FVELVRDHFEIPQLKIISRQDSKIDGASKLLVQTEDGLNIETVILRIGT 95 Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN 172 R +LC+SSQ GC +C FCSTA GF RNL ++EIIGQV A +I+ R + N Sbjct: 96 GRTSLCISSQAGCTEKCTFCSTATLGFKRNLTLAEIIGQVILAGEILRKED----RKVRN 151 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALA 231 +V MGMGEPL N +NV+ ++EIML GLS +RVT+ST G+ + KL +V LA Sbjct: 152 IVFMGMGEPLRNTDNVLKSLEIMLSSAYMGLSSKRVTVSTIGITDNITKLRHSFPEVNLA 211 Query: 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 +SLHA ND++RD ++PINK + +ET + E ++ G + I+Y+++ +ND E Sbjct: 212 LSLHASNDQVRDILMPINKTFPMETIKETLLSAQELAS---GDLMIQYLLIKDLNDSPEQ 268 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGA-PYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDD 350 A +LA LK C INLIP+N G + SS ++ F VL F R + G D Sbjct: 269 AQELAAFLKGINCIINLIPYNDSMGMGNWKCSSEEKMSAFQDVLQESDFQVTRRHSLGRD 328 Query: 351 IDAACGQLAGDVIDR 365 IDAACGQLA + Sbjct: 329 IDAACGQLAAKNQKK 343 >UniRef50_D2VS80 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VS80_NAEGR Length = 482 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 136/432 (31%), Positives = 201/432 (46%), Gaps = 82/432 (18%) Query: 12 TTKDGKINLLDLNRQQMREFFKD---LGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLR 68 +T+ + +L+ LN+ +M+E + FR +++ K++Y + FD++T + K R Sbjct: 26 STQIVRKSLMGLNKTEMKEILEKTHPHVASSFRLNEIYKFIYKFGARKFDDITVLTKSDR 85 Query: 69 GKLKEVAEI---RAPEVVEEQRSSDGTIK---------WAIAVGDQRV------------ 104 L E+ I E + + T K + V D V Sbjct: 86 QSLSELYSIDILGNIEEEIKSKKDKHTRKFLFAFQNPKYVPPVADNSVDSTIVSTTSSAS 145 Query: 105 ---------------------------------ETVYI-------PEDDRATLCVSSQVG 124 E VYI R T+C+SSQVG Sbjct: 146 SSCGNQQNISDADVAISPMKKPTLKEQKQFNKVEAVYIYHPPKASDSFGRGTVCLSSQVG 205 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP-----------ITNV 173 C+L CKFC T RNL SEI+ Q+ + + + N+ Sbjct: 206 CSLNCKFCRTGTAPIERNLLASEIVSQLVSVKHRLMDFPIYMTEEERKRASIEKSFVNNI 265 Query: 174 VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAIS 233 V MG GEPL N NV A+EI+ D G G+SKR++ +STSGV + + + + V LAIS Sbjct: 266 VFMGEGEPLYNYKNVKKAIEILSD--GCGISKRKIIVSTSGVCNLIPDVVNDLGVNLAIS 323 Query: 234 LHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 LHA +E+RD IVPINK + +E +R + N +T EYVML+HVND + A Sbjct: 324 LHATTNELRDNIVPINKIFPLEVLFETLRE--QCFKNNNRHITFEYVMLNHVNDFIDDAK 381 Query: 294 QLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDA 353 +L +L+KD PC +NLI +N + G+ + SS+ RI+ FSK L G + VR ++G DI Sbjct: 382 RLVKLVKDIPCSVNLIAFNEWEGSGFECSSDERIEEFSKYLYKNGISAPVRHSKGQDILG 441 Query: 354 ACGQLAGDVIDR 365 ACGQL ++ Sbjct: 442 ACGQLKNRNENK 453 >UniRef50_B5JDK5 Radical SAM enzyme, Cfr family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDK5_9BACT Length = 342 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 112/353 (31%), Positives = 177/353 (50%), Gaps = 21/353 (5%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTD--INKVLRGKLKEV 74 K ++ D +++ + + G + ++ Y F + + + KE Sbjct: 2 KTSIYD--IKKLEKHLRHNGF----GARELRRTYRMLFREFTPLENLGWDDAFTANFKEQ 55 Query: 75 AEIRAPEVVEEQRSS-DGTIKWAIAVGD-QRVETVYIP-EDDRATLCVSSQVGCALECKF 131 E +V S DG K D +++ETV + R ++CVSSQVGC +C+F Sbjct: 56 FETSYLTLVSRIDSKIDGATKLLFETPDGKKIETVILRIATGRTSICVSSQVGCTEKCRF 115 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C+T + GF RNL+ EI+ QV +A +I+ + R + N+V MGMGEPL N +N+V A Sbjct: 116 CATGELGFFRNLKSEEILDQVVQAGRIL----ASEDRSLRNIVFMGMGEPLRNYDNLVAA 171 Query: 192 MEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINK 250 M+ +L + F +R+T+S+ G+ + K V+LA+SL+ ND R E++PIN Sbjct: 172 MDQLLSEHVFKFVPKRITVSSLGIPELIVKFAQRFPQVSLALSLNGSNDAARSEVMPINN 231 Query: 251 KYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 +Y + + + + ++ V IEY+M +ND E A ++A L+ INLIP Sbjct: 232 RYPMADLRSMLEQL--ETIREGI-VMIEYIMFKDLNDSVEDAAKVAAFLRGLAVHINLIP 288 Query: 311 WNP--FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 +NP + SS I+ F L S G+ R + G DI AACGQLA Sbjct: 289 YNPDYSLNKSFLPSSIETIEAFKNHLQSEGYKVTRRFSLGQDIAAACGQLANK 341 >UniRef50_B7S3M1 Predicted protein n=2 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7S3M1_PHATR Length = 471 Score = 313 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 176/339 (51%), Gaps = 29/339 (8%) Query: 61 TDINKVLRGKLKEV-----AEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPE-- 111 + + + L+E + Q S+D T K A+ + D Q VE+V + Sbjct: 60 SQLPRKFLDFLQEDAQSSGFVTVTSRIEFAQTSADRSTTKLAVQLHDGQLVESVLMRYVS 119 Query: 112 -----DDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTG 166 + RA+LCVSSQ GCA+ C FC+T G + NL EI+ Q+ + Sbjct: 120 TATSNNSRASLCVSSQCGCAMGCTFCATGTMGLSGNLTAGEILEQIPLPKLDL------- 172 Query: 167 QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDM 225 + NVV MGMGEPL N +NVV A ++D + L+ RVT+ST G+V + KL ++ Sbjct: 173 ---VRNVVFMGMGEPLDNYSNVVEACRALIDRQRWNLAHGRVTVSTVGLVSQIRKLTAEL 229 Query: 226 IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHV 285 +V+LA+SLHAPN + R IVP K Y +E + A+ +++ + IEYVML+ Sbjct: 230 PEVSLALSLHAPNQQDRQAIVPTAKHYPLEDLIDALDQHMMAYLQKRTNPMIEYVMLEGP 289 Query: 286 NDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVR 344 E AHQL +L ++ +NLIP+N S ++ F ++++SYG +R Sbjct: 290 TSTLECAHQLGKLCENRHLVVNLIPYNQTNVRDVLRCPSREHMEEFREIVVSYGSFCTIR 349 Query: 345 KTRGDDIDAACGQLAGDVIDRTKRTLRKR-MQGEAIDIK 382 KT G DID+ACGQL + K++ + +G+ DI+ Sbjct: 350 KTMGADIDSACGQLIT--LRENKQSQNEHNAKGDVKDIE 386 >UniRef50_A9FD89 Probable RNA methyltransferase sce1580 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=Y1580_SORC5 Length = 398 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 116/363 (31%), Positives = 171/363 (47%), Gaps = 20/363 (5%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWM--YHYCCDNFDEMTDINKVLR--------- 68 L D + + E + G A V + + + + + Sbjct: 42 LADHDAASLAELLRRAGGTASAARAVSGKVVRHAFGAEPGAPAPAWDARALAALGVGAWA 101 Query: 69 -GKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCA 126 L + + E+ E + D T++ + GD +E+V IP R TLCVSSQVGCA Sbjct: 102 HEALLALDPAPSLEIAERAPAQDDTLRLVLRAGDGALIESVLIPGPARTTLCVSSQVGCA 161 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 C FC T + G R L EI+ QV A + G P+ N+V MGMGEP NL Sbjct: 162 RACSFCETGRLGLERQLAAGEIVDQVRIARALAAER---GGAPLRNLVFMGMGEPFDNLG 218 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIV 246 V+ A+ ++ D F + VT+ST GV ++ LA+SL+AP+D R I+ Sbjct: 219 EVLKAIRLLTDPRAFRFAPSHVTVSTVGVADKIEPFFRDARAELAVSLNAPDDARRQAIM 278 Query: 247 PINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI 306 P+N +++ +AA++ + ++ RV EYV+ D ND E A LA + C++ Sbjct: 279 PVNARFS----MAALKEAIARALPPGRRVLFEYVLFDRFNDAPEDADLLAAYVAGLRCRV 334 Query: 307 NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 N+IP NP P S +R+D F L +G TT+VR+ RG D+ ACGQLAG R Sbjct: 335 NVIPCNPGPDPALRPPSAARLDAFVARLSGHGVTTLVRRPRGRDVGGACGQLAGMARLRQ 394 Query: 367 KRT 369 Sbjct: 395 PEP 397 >UniRef50_A4RV36 Predicted protein (Fragment) n=3 Tax=Viridiplantae RepID=A4RV36_OSTLU Length = 298 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 154/306 (50%), Gaps = 18/306 (5%) Query: 64 NKVLRGKLKEVAEIRAPEVVEEQRSSDGTI-KWAIAV-GDQRVETVYIPE-DDRATLCVS 120 + + L+ + +V E RS DGT K + + G VE + R TLCVS Sbjct: 2 PRAVVDALRANFVLYTTKVRHESRSGDGTTTKMIVELAGGDVVEACVMRHAKGRTTLCVS 61 Query: 121 SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE 180 SQVGC + C FC+T G NL EI Q+ A++ + NVV MGMGE Sbjct: 62 SQVGCKMGCTFCATGTLGELGNLSAGEICEQLAHASR---------GDAVRNVVFMGMGE 112 Query: 181 PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPND 239 PL N NV+ A+E M D GFGLS ++T+ST GV+P + L D LA+SLHAPN Sbjct: 113 PLNNYRNVIDAIEAMTSDKGFGLSPAKITVSTVGVIPRMRTLRRDAPGTRLALSLHAPNQ 172 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 +R +IVP Y +E +A + ++ ++ + + IEY +L VND A +L LL Sbjct: 173 ALRQKIVPTATAYKLEDLMATLDEHM--ASGPKMKTMIEYCVLGGVNDDEACARELGALL 230 Query: 300 KDTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLM--SYGFTTIVRKTRGDDIDAACG 356 + +NLIP NP A + + + + ++L + T VR G DI ACG Sbjct: 231 RGKEVIVNLIPLNPTDTPAGHVPPTREAVQKMLEILTSPEFDLFTTVRHEMGQDIAGACG 290 Query: 357 QLAGDV 362 QLA Sbjct: 291 QLALKT 296 >UniRef50_Q7UPG1 Probable RNA methyltransferase RB6963 n=2 Tax=Planctomycetaceae RepID=Y6963_RHOBA Length = 379 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 112/361 (31%), Positives = 180/361 (49%), Gaps = 19/361 (5%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 +M +D P QV + + + F+ +D + + + E E+ + ++ Sbjct: 11 FQTHEMEALRRDRRLDP----QVFRKLRNDLLKKFE--SDEAVLEKYPVAEAIELHSLKL 64 Query: 83 VEEQRSS-DGTIKWAIAVG-DQRVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGF 139 + S DG K +E+V + R TLCVSSQ+GCA C FC+T + G Sbjct: 65 YQRMDSEIDGATKLLFETESGMLIESVILRIATGRTTLCVSSQIGCAAACDFCATGKMGI 124 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 +NL EI+ QV +A +I+ R ++N+V MGMGEPL N NV A+E++ Sbjct: 125 AKNLATEEILDQVVQAGQILR----GEDRRLSNIVFMGMGEPLHNEVNVTEAIELLTAPD 180 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F S V +ST GV + +L ++ LA+SLH+ + R++I+P+ KK ++ Sbjct: 181 HFARSPSTVLVSTVGVPAGMLRLAKRFPNLNLALSLHSADQTTREKIIPLGKKASLAQLH 240 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 A+ E IEY+ML VND + A +L + + D +NLIP+N +P Sbjct: 241 DAIH---EIQTIQDREFMIEYLMLRDVNDSAKDADRLIDWIGDLRVHVNLIPYNTIEASP 297 Query: 319 Y-GRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGE 377 + SS I+ F+ +L + G T VR + G+DI+AACGQL +R + +R + E Sbjct: 298 HLHASSRPVIESFADILKASGLKTTVRYSLGNDIEAACGQLIRQ-ENRQRAMQARRTESE 356 Query: 378 A 378 + Sbjct: 357 S 357 >UniRef50_B4U5N7 Radical SAM enzyme, Cfr family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5N7_HYDS0 Length = 340 Score = 301 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 112/334 (33%), Positives = 172/334 (51%), Gaps = 22/334 (6%) Query: 33 KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGT 92 + L + +R Q+ W + + + MTDI K LR +LK + + + E + + Sbjct: 13 QKLNLEKYRISQIKSWAFKKKITDIELMTDIPKSLRQELKIDFHVLSLDSFLE---GEDS 69 Query: 93 IKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQ 151 K+ D VE+V I E D TLC+S+Q+GCA+ CKFC + G RNL SEI+ Q Sbjct: 70 TKFVFKTKDGYFVESVLIKEKDHYTLCISTQIGCAVGCKFCVSTIGGLLRNLSFSEIVDQ 129 Query: 152 VWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLS 211 + + + I N+V MGMGEPL N N+ A I L + F LSKR +T+S Sbjct: 130 YFYIS-------ILRNTFIRNIVFMGMGEPLANFENLKKASFIFLKE--FELSKRHITIS 180 Query: 212 TSGVVPALDKLGDMI---DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS 268 TS + KL + + LAISL+A +DE R ++P N +++ ++ Y Sbjct: 181 TSAYTNYIKKLKEDSFLNKLNLAISLNASDDETRKALMP-NVIGSLKELFEILKTYPL-- 237 Query: 269 NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK--INLIPWNPFPGAPYGRSSNSR 326 + R+TIEYV++ +N + A L LLK+ K +NLIP+N P + R S Sbjct: 238 -EPRRRITIEYVLIKDINSSLKDAKNLVNLLKNLKHKTKVNLIPYNENPMLSFERPVESD 296 Query: 327 IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG 360 I RF + L+ + +R ++G ++ AACG L+ Sbjct: 297 IYRFQQELLKNDISCTIRWSKGLELAAACGHLSR 330 >UniRef50_C7GI13 Radical SAM enzyme, Cfr family n=15 Tax=Clostridiales RepID=C7GI13_9FIRM Length = 329 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 103/352 (29%), Positives = 154/352 (43%), Gaps = 41/352 (11%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 ++M E GE RA +Y +++ Sbjct: 17 YGFTYKEMSEVI---GEDKARA------LYAELYKQPFHKKNLS---------------I 52 Query: 81 EVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 + +SSD T K+ + D R +ETV+I D T+CVS+QVGC++ C FC + + GF Sbjct: 53 STKKVYKSSD-TEKYVYELKDNRYIETVFIKRRDGGTVCVSTQVGCSVGCIFCESGRNGF 111 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 RNL SEI+ QV + + +V MGMGEPL N +N++ A+ I+ D Sbjct: 112 VRNLTPSEIVQQVILIRQ-----------KVNRIVFMGMGEPLFNYDNLIAAIHILRDRN 160 Query: 200 GFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 G +T+ST G V L KL + + + L ISLHA R+ I+P Y IE + Sbjct: 161 GLNFPTDGITVSTVGPVNQLKKLREEHLKIQLTISLHAATQAARNCIIPHMHMYAIEDVV 220 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAP 318 Y S + +V Y++L +ND + QLA+ K IN++ +NP + Sbjct: 221 KQALSY---SQRHNRKVVFAYLLLPGINDRSSDIRQLAKWFKGKNVMINVLQYNPTSNSK 277 Query: 319 YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTL 370 + F L G +R + G +I AACGQLA K+ Sbjct: 278 IRAPQKQEMVAFKHQLEQTGLEVTMRVSHGREIKAACGQLANTYNKAKKQQK 329 >UniRef50_C1E2Q2 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1E2Q2_9CHLO Length = 368 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 117/376 (31%), Positives = 178/376 (47%), Gaps = 51/376 (13%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 L+ ++ F +D G K + ++ F+ D++ L++ + EV Sbjct: 4 LDIDEVERFARDRGIKKSSLRLCYRELFRRGKSTFENAPDVSARDMKLLRDNFTVCTSEV 63 Query: 83 VEEQRSSDGT-IKWAIAVGDQR-VETVYIPEDD--------------------------- 113 VE + + DG+ K + + D + VETV I Sbjct: 64 VETKTTEDGSGAKMVVRLHDGKLVETVVIGHSRSVDDGDGDETRGDGEDADVSDGAKNRV 123 Query: 114 -RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN 172 R T+CVSSQVGCA+ C FC T G NL EI QVW A + G+ + N Sbjct: 124 FRNTVCVSSQVGCAMGCTFCETGTLGLMANLTAGEICEQVWHARNLCGSTG------VRN 177 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALA 231 VVMMGMGEPL N V+ A+ M F + +R VT+ST GV ++ +L D +V LA Sbjct: 178 VVMMGMGEPLDNYEEVLIALRAMTHQAVFDMRQRSVTVSTVGVPASIRRLADDAPNVGLA 237 Query: 232 ISLHAPNDEIRDEIVPIN--KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGT 289 +SLHAP ++R ++P + + ++R + +KS IEY+++D VND Sbjct: 238 LSLHAPTQDLRATLLPSAAGTSHTLGRLTESLRYHRQKSGRGA---MIEYIVIDGVNDSP 294 Query: 290 EHAHQLAELLKDTPCKINLIPWNPFP---GAPYGRSSNSRIDRFSKVL-MSYGFTTIVRK 345 HA +L EL + +NLIP+NP Y ++ ++R + +L +G VR Sbjct: 295 THARELGEL---SGYFVNLIPYNPTDVGGTHGYRSPADDALERMASILGDEFGVKAKVRW 351 Query: 346 T--RGDDIDAACGQLA 359 + RG ++D ACGQLA Sbjct: 352 STRRGREVDGACGQLA 367 >UniRef50_Q1CYE1 Probable RNA methyltransferase MXAN_6459 n=2 Tax=Cystobacterineae RepID=Y6459_MYXXD Length = 358 Score = 299 bits (767), Expect = 8e-80, Method: Composition-based stats. Identities = 107/350 (30%), Positives = 166/350 (47%), Gaps = 17/350 (4%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDE---MTDINKVLRGKLKEV 74 +NL L+ Q++ L P +V ++ + + ++ + + + L+ Sbjct: 1 MNLKSLSLQELEAALAPLSPSPAAVRKVFAAVFAHGAQSVEDVASARQVPRRVGDHLRAH 60 Query: 75 AEIRAPEVVEEQRSSDGTIKWAIAVG-DQRVETVYIP-EDDRATLCVSSQVGCALECKFC 132 AE+ +VE +R+ DG +K+ R+E V IP D++ +CVSSQVGCAL C FC Sbjct: 61 AEMPKLAIVERRRADDGFVKYLFDSPLGGRIEAVRIPIFDEKYVICVSSQVGCALACDFC 120 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 T + GF RNL+ EI+ QV + + RP+ VV MGMGEPLLN + A Sbjct: 121 MTGKLGFKRNLQTWEILDQVLQVRE-------EADRPVRGVVFMGMGEPLLNYKETLRAA 173 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDK-LGDMIDVALAISLHAPNDEIRDEIVPINKK 251 +I+ GF ++ +T ST+G VPA+ + + + LA S+ + E R +++PI K Sbjct: 174 DILRHPAGFSIAGEAITFSTAGHVPAIRRYVREGHPYRLAFSVTSAIAEKRAKVLPIEKT 233 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 + + +AA+R Y E R I YV + N G E A L + K++LI Sbjct: 234 HPLPELIAAIREYSEVRRE---RAMIAYVAISGFNMGREDAEALKVAFEGIRIKVDLIDV 290 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 G Y + + F L R + G +I AACG LA Sbjct: 291 TDPTG-KYLPPTPEELSAFRDHLQILKSPVARRYSGGKEIGAACGTLAAT 339 >UniRef50_Q8IM25 Radical SAM protein, putative n=5 Tax=Aconoidasida RepID=Q8IM25_PLAF7 Length = 362 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 24/362 (6%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 + + + + +R Q+M +Y ++M +I +R +LK + Sbjct: 3 KSKRYISLIKMMERKKFEKYRLKQIMDNIYKGKIIEINKMKNIPTEIRRELKNIFHNNIL 62 Query: 81 EVVEEQRSS-DGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG 138 + + D K D ++E + +LC+SSQ+GC+ CKFC+T Q G Sbjct: 63 SIKPIKELKYDRAYKVLFQCKDNEKIEATSLDFGSHKSLCISSQIGCSFGCKFCATGQIG 122 Query: 139 FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 R L + EI Q+ + I N+ MGMGEPL N V +++ D+ Sbjct: 123 IKRQLDIDEITDQLLYFQ--------SKGVDIKNISFMGMGEPLAN-PYVFDSIQFFNDN 173 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 F +S RR+ +ST G++P + KL + V LA SLH+P E RD++VPINK + Sbjct: 174 NLFSISNRRINISTVGLLPGIKKLNNIFPQVNLAFSLHSPFTEERDQLVPINKLFPFNEV 233 Query: 258 LAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP------CKINLIPW 311 + + K+ RV I Y+++ ++ND +HA L++ + P + LIP+ Sbjct: 234 FDLLDERIAKTGR---RVWISYILIKNLNDSKDHAEALSDHICKRPNNIRYLYNVCLIPY 290 Query: 312 NP---FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 N + +I +F K+L G + R + G IDAACGQL D + ++ Sbjct: 291 NKAKNVDENFHRLDDAEKILQFEKILKKNGISFFYRNSFGYSIDAACGQLYADYEPKKRK 350 Query: 369 TL 370 Sbjct: 351 EK 352 >UniRef50_Q136A2 Probable RNA methyltransferase RPD_2859 n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Y2859_RHOPS Length = 359 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 150/320 (46%), Gaps = 16/320 (5%) Query: 57 FDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRA 115 F D + L+ + + + K + D VE+V I D Sbjct: 50 FFPHADPPRRLQNWARSRGVRLRTLTRIGRDQGGRSEKMLFGLHDGYAVESVLIRRFDGH 109 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 T C+SSQVGCA C+FC++ Q G RNL EI+ QV R + +V Sbjct: 110 TACISSQVGCAFACRFCASGQAGLMRNLEAGEIVEQVVRL-----------GPKVNRIVF 158 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISL 234 MG+GEPL N V+ A+ I+ D G +TLST G+ AL +L + + + L ISL Sbjct: 159 MGIGEPLNNYQQVLKAIRILRDRQGMNFPTTGITLSTIGIPKALKQLREEHLAINLTISL 218 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 HA E+RD ++P +K+ + + + + + VT Y++L +ND A + Sbjct: 219 HATTQEVRDRLIPGARKHPLGEVVERACAW---ARRHNRPVTFAYLVLPGINDSIADARR 275 Query: 295 LAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAA 354 LA +L+D+P ++NL+ WNP G R+ + + F L + +VR T+G DI AA Sbjct: 276 LAAMLRDSPARVNLMRWNPVDGVGLQRTPDRSLAHFRTTLENALVPVVVRDTQGRDISAA 335 Query: 355 CGQLAGDVIDRTKRTLRKRM 374 CGQL + R R Sbjct: 336 CGQLWLRDLKGLPVGNRPRQ 355 >UniRef50_B6AEB0 Radical SAM domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AEB0_9CRYT Length = 529 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 119/439 (27%), Positives = 186/439 (42%), Gaps = 109/439 (24%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEV 82 + + F++L A +V +++ F ++ DI K + +++ ++ + Sbjct: 15 FDSSSFLKVFRELKVSESHAYRVWRYLIQKNVKEFSDIPDIPKRILEEIQLNFKLLTSNI 74 Query: 83 VEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDD-------------------------RA 115 V+ + DG T K I + D +ETV + D R Sbjct: 75 VQSHTTDDGNTTKLIIRLQDGHEIETVIMRYDRCNDVAKKSENKNLDTLEVPNLPIYRRV 134 Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 +LCVSSQ+GC + C FC+T G +L EII QV+ A I+ P+ NVV Sbjct: 135 SLCVSSQIGCRIGCTFCATGTLGLGGSLVTGEIIEQVYHAINILN-------EPVKNVVF 187 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID-VALAISL 234 MGMGEPL N N VV A++I+LD +GLS ++++ST G+ + + D + V L +SL Sbjct: 188 MGMGEPLENYNEVVDAIKILLDTRLYGLSPSKISISTVGIPSGIVNMADDLPGVGLCLSL 247 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ---------------------- 272 HAP+ +R++IVPI K Y I + + ++ KS N+ Sbjct: 248 HAPDQVLREQIVPIAKMYKISELIRSTDIFIAKSILNKFIKKITDQRNNRTEIKIDNLES 307 Query: 273 -----------GRVTIEYVMLDHVNDGTEHAHQLAELLKDTP------------------ 303 V IEY+++ VND HA LA LL +T Sbjct: 308 TIISPKWFNSHSTVMIEYILIKDVNDSINHAKALANLLNNTYTDKNDINMIFERCIQSER 367 Query: 304 ----------------------CKINLIPWNPFPGAP-YGRSSNSRIDRFSKVLMSYGFT 340 +N++P++ P Y S ++ F ++L +YG Sbjct: 368 LEKKVAKSFQKAFLDNYKRSNFIFVNILPYSETNATPKYATPSEGKVRTFCRILNNYGIV 427 Query: 341 TIVRKTRGDDIDAACGQLA 359 VR+ G DI ACGQLA Sbjct: 428 VTVRRKMGQDIGGACGQLA 446 >UniRef50_C1ZMH3 23S rRNA m(2)A-2503 methyltransferase n=3 Tax=Planctomycetaceae RepID=C1ZMH3_PLALI Length = 273 Score = 291 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 145/265 (54%), Gaps = 10/265 (3%) Query: 20 LLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRA 79 + + + ++ ++ ++ G +RA Q+ + ++ F EMT++ LR L + Sbjct: 5 IYEKSPAELVQWCQEQGLPTYRAGQIQQQIFPNRATQFGEMTNLPAKLRELLAATFTLLP 64 Query: 80 PEVVEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG 138 EVV Q + D T K + + D VE V + EDDR T+C+S+QVGC + C FC++ G Sbjct: 65 SEVVAHQIAKDRTEKLLLQLHDGSLVECVLMREDDRRTICISTQVGCGMGCVFCASGLLG 124 Query: 139 FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 RNL EI+ QV R +++ +TNVV+MGMGEPL NL N++PA++ + D Sbjct: 125 LKRNLTTGEILEQVLRLDRLL-----PADEKLTNVVVMGMGEPLANLKNLLPALDRLTAD 179 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIETF 257 G GL RR+T+ST G+ + +L LA+SLHAP E+R ++VP+NK IE Sbjct: 180 DGLGLGARRITVSTVGLPEKIRELAQTGHQFNLAVSLHAPEAELRTKLVPVNKNIGIEAV 239 Query: 258 LAAVRRYLEKSNANQGRVTIEYVML 282 L A Y + RV+ EYV Sbjct: 240 LEAADDYFAITGR---RVSYEYVFW 261 >UniRef50_Q5CQD5 Conserved protein with transmembrane region at C-terminus (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CQD5_CRYPV Length = 602 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 120/485 (24%), Positives = 183/485 (37%), Gaps = 133/485 (27%) Query: 5 LVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDIN 64 L+ EN D K + + + + + + D G K A + + + N E+ DI Sbjct: 1 LIIMENKRRTDIKKHSI-FDYKSLTKALDDAGVKRIHAYTIWRNIVQKGIKNMSEIKDIP 59 Query: 65 KVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPEDD--------- 113 K + E I +++ Q S DG T K + D +E V + D Sbjct: 60 KAAYKIINEQFSILNIQLINSQTSKDGNTTKIIFRLQDSHEIEAVIMRYGDDQVNENTNI 119 Query: 114 ------------------------RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEII 149 R ++CVSSQ+GC + C FC+T G +L EI+ Sbjct: 120 CNSNSNNKNNDSNQQEISTSSKYKRISICVSSQIGCRMGCMFCATGSMGLRGSLLSGEIL 179 Query: 150 GQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVT 209 Q++ I+ P+ NVV MGMGEPL N + V+ ++ +M+D F LS + Sbjct: 180 QQLYYIKNILK-------EPVRNVVFMGMGEPLENYDEVIDSIRLMVDPRIFSLSSGHIL 232 Query: 210 LSTSGVVPALDKLGDMID-VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS 268 +ST G+ + L D + V L +SLHAPN +R+ I+PI + Y I + ++ ++ K+ Sbjct: 233 VSTVGIPSNIINLADDLPGVGLCLSLHAPNQSLRERIIPIARLYKISDLMRSLDIFIFKT 292 Query: 269 NANQ---------------------------------GRVTIEYVMLDHVNDGTEHAHQL 295 N+ + IEY ML VND +HA +L Sbjct: 293 IINKCYKNLLDDRNKDHIKDNMNYDDILISNKLLYGHKMIIIEYTMLKDVNDSEDHAVEL 352 Query: 296 AELLKDTPCKINLIP---------------W---NPFPGAPYG----------------- 320 A LLK+TP N+I + N + Sbjct: 353 ANLLKNTPISKNIIEEIIDNRDDSVKMNINYMSDNKIINKNFKSHIASTIFKELSKDFNR 412 Query: 321 ---------------------RSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 S I +F+KVL+ VR+ GD I ACGQLA Sbjct: 413 TNFAIVNLIPYNKTNTSTRFSTPSKEIITKFAKVLIDLNIFVTVRRKMGDGIFGACGQLA 472 Query: 360 GDVID 364 Sbjct: 473 LKQAK 477 >UniRef50_Q2Z000 Putative uncharacterized protein n=1 Tax=uncultured candidate division OP8 bacterium RepID=Q2Z000_9BACT Length = 365 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 102/357 (28%), Positives = 166/357 (46%), Gaps = 21/357 (5%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 + + DL ++ G A ++ + + +++ + +++E Sbjct: 19 QPMPLQFKDLTAAELHAALAPEGVSLRLARRLQAAVLKRDAF-PRTLPEVSDKMLARIRE 77 Query: 74 VAEIRAPEVVEEQRS-SDGTIKWAIAVGD-QRVETVYIP-----EDDRATLCVSSQVGCA 126 + + ++ S DG K+ + E V IP D++ C+SSQVGCA Sbjct: 78 EVRLPKLVLKDKAVSARDGFAKYLFQGDGPEPFEAVRIPLLHRSGDEKYIACLSSQVGCA 137 Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 L C FC+T + GF RNL E++ QV R + + PI V MGMGEP+LN Sbjct: 138 LGCAFCATGRMGFVRNLSAWEMVDQVIRLS-------ADSEHPIRGAVFMGMGEPMLNYE 190 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEI 245 VV A I+ + G +S + V++ST+GVVP + + D + L +SL + + R E+ Sbjct: 191 AVVRAARILCEPCGLAVSAKAVSISTAGVVPGIRRFTADRLPFRLVVSLTSADSARRREV 250 Query: 246 VPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK 305 +P+ + Y + + AVR Y + S RV + + M+ N E A QLA L++ P + Sbjct: 251 MPLEQAYPLTDLMEAVREYHKSSG---QRVILAWTMISGFNTREEDAVQLAALVRGLPIR 307 Query: 306 INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSY-GFTTIVRKTRGDDIDAACGQLAGD 361 ++LI N G + S+ + F L + R + G DI AACG LAG Sbjct: 308 LDLIDVNDATG-RFKPPSSLELHEFRDALSKHLKMPVARRYSGGKDIRAACGMLAGR 363 >UniRef50_Q2IHD1 Probable RNA methyltransferase Adeh_4229 n=4 Tax=Anaeromyxobacter RepID=Y4229_ANADE Length = 338 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 18/338 (5%) Query: 29 REFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRS 88 R + G A ++ + + ++ + + ++ +A ++E + Sbjct: 10 RTLARRAGISLEDARRITGAVIGRGAP-LRDARNVRRSVLDEVDALATPGELRLLESVDA 68 Query: 89 SDGTIKWAIAVGDQ-RVETVYIP-EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVS 146 DG K+ + D RVETV IP D +C+SSQ GCAL C FC+TA+ G +R+LR Sbjct: 69 KDGFRKYLFELPDGLRVETVRIPLYDTHHVVCLSSQAGCALGCAFCATAKLGLDRSLRSW 128 Query: 147 EIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKR 206 E++ Q+ +RPIT VV MG GEP LN + V+ A + D G + R Sbjct: 129 EMVSQLLAVR-------ADSERPITGVVFMGQGEPFLNYDEVLAAAYALCDPAGARIDAR 181 Query: 207 RVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYL 265 R+++ST+GVVP + + + L ISL+A R ++P+ + + ++ + A+R + Sbjct: 182 RISISTAGVVPMIRRYTAEGHKFRLCISLNAAMPWKRRALMPVEQGFPLDELVEAIREHA 241 Query: 266 EKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNS 325 VT+EYVM+ VN G E A L LL P ++N I N G Y Sbjct: 242 ALRGR----VTLEYVMISGVNVGEEDAAALGRLLAGIPVRLNPIAVNDASG-RYRPPDED 296 Query: 326 RIDRFSKVLMSY--GFTTIVRKTRGDDIDAACGQLAGD 361 + F L G + R + G D AACG LA Sbjct: 297 EWNAFRDALARELPGTPVVRRYSGGQDEHAACGMLASR 334 >UniRef50_B7FTW5 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTW5_PHATR Length = 296 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 115/301 (38%), Positives = 152/301 (50%), Gaps = 21/301 (6%) Query: 83 VEEQRSSDGTIKWAIAVGDQR-VETVYIPEDDR--ATLCVSSQVGCALECKFCSTAQQGF 139 V E ++DGT K + + D VETV IP D+R +TLCVSSQVGC C FC T + G Sbjct: 1 VHESVAADGTTKLLLQLVDGLQVETVIIPWDERQRSTLCVSSQVGCRQACTFCLTGRMGI 60 Query: 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDF 199 R+L EI+ QV A + + PI N+V MGMGEP N + VV A ++ Sbjct: 61 LRSLSADEILVQVLLAKRACRENNI---YPIDNIVFMGMGEPADNTDAVVRAANVLTHQQ 117 Query: 200 GFGLSKRRVTLSTSGV-VPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFL 258 F L+ RR+T+ST A KLG VALA S+HA + +R E+VP K Y +E Sbjct: 118 QFQLTPRRITISTVAPSPDAFLKLGKAP-VALAWSVHASREAVRRELVPTTK-YTMEELR 175 Query: 259 AAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-------DTPCKINLIPW 311 + L + + +E +LD +ND E A LA+ + +NLIPW Sbjct: 176 EGYIKALLDRSRSMRTTMLEVTLLDKINDSLEDAEHLADFCQPLLKSVPGIKLVVNLIPW 235 Query: 312 NPF-----PGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRT 366 N P + Y + + RI F K L+ G VR TRGDD AACGQLA + Sbjct: 236 NDISASFGPASVYRKPTTERIGEFQKALIGRGILCYVRTTRGDDEGAACGQLATTNKVKH 295 Query: 367 K 367 K Sbjct: 296 K 296 >UniRef50_B5Y3J7 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y3J7_PHATR Length = 290 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 142/291 (48%), Gaps = 15/291 (5%) Query: 84 EEQRSSDGTIKWAIAVGDQ-RVETVYIPE-DDRATLCVSSQVGCALECKFCSTAQQGFNR 141 +S D T K + + D VETV IP R+TLCVSSQVGC C FC+T + G R Sbjct: 1 HISQSRDSTTKLLLRLSDGLEVETVIIPWTGGRSTLCVSSQVGCRQGCTFCATGRMGKLR 60 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 +L EI+ Q++ A KI + P+TNVV MGMGEP N + V+ A +IM F Sbjct: 61 SLNADEILAQLFFARKICRQKNLP---PVTNVVFMGMGEPADNKDAVIRATDIMTTRELF 117 Query: 202 GLSKRRVTLSTSGVVPA-LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 LS +VT+ST P + LA S+HA NDE+R ++VP K + + Sbjct: 118 QLSASKVTVSTVAPTPDSFLQFAHA-HCVLAWSVHAANDELRRQLVPTTK-HAMTELRQG 175 Query: 261 VRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK-------DTPCKINLIPWNP 313 + L N +E ++ +ND + A +L + + +NLIP+N Sbjct: 176 LIDTLLIRPHNFRTTMLEVALISGINDSEKEADELVDFAQVIIDEVPGCKLVVNLIPFND 235 Query: 314 FPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 Y + S + F K L +G +R TRGDD AACGQLA + Sbjct: 236 IGQNRYTKPSMEAVSVFQKRLREFGLVAHIRTTRGDDESAACGQLATNKQK 286 >UniRef50_B6KPF5 Radical SAM domain-containing protein n=4 Tax=Toxoplasma gondii RepID=B6KPF5_TOXGO Length = 619 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 144/288 (50%), Gaps = 21/288 (7%) Query: 105 ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV 164 E + RAT+C+S+QVGC + C FC+T G RNL EI+ Q++ A+++ Sbjct: 205 EQRLYKSNRRATVCLSAQVGCQMGCTFCATGTMGKKRNLAEWEILEQLYHASRV------ 258 Query: 165 TGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG- 223 I N+V MGMGEPL N N+VV ++ M F + RV +ST G+ + +L Sbjct: 259 ---ETIRNIVFMGMGEPLDNYNSVVSSIRFMTQPNKFAIGGHRVCISTVGLPHKIRQLAS 315 Query: 224 DMIDVALAISLHAPNDEIRDEIVPINKK-YNIETFLAAVRRYLEKSNANQGR------VT 276 D+ LA+SLHAP+ R +++P + +E L A ++++ + Sbjct: 316 DLPACRLALSLHAPDQPTRLKLMPRAAAGWKLERVLEATDEFVKQQKRLNSTGMKNIGLL 375 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDT--PCKINLIPWNPFP-GAPYGRSSNSRIDRFSKV 333 +EY+M+ VND E AH L +L+ +NLIP+NP Y S+ R+D F + Sbjct: 376 VEYIMIQDVNDTLEQAHALGRILQPRADAVIVNLIPYNPTDVPYDYKPSTQERVDDFLTI 435 Query: 334 LM-SYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAID 380 L Y +VR+T G DID+ACGQL R E+ D Sbjct: 436 LRKEYAIKVLVRQTLGQDIDSACGQLVVRAGQEESRGKMSDTSDESED 483 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 7/113 (6%) Query: 2 SEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMT 61 S+ ++ + ++ D + L K A ++ +++ +F E+ Sbjct: 25 SQTFSESSPAPRRESRTSVFDAS-----ALLSALDGKTVHAQKIWRYVVQKNVQDFREIP 79 Query: 62 DINKVLRGKLKEVAEIRAPEVVEEQRSSDG-TIKWAIAVGDQR-VETVYIPED 112 D+ + L L E + A V+ + S D T K + D +ET + Sbjct: 80 DLPRRLYATLAENFCLHASRVLRTKTSRDRSTTKLLLEFPDGSQIETCIMRYG 132 >UniRef50_A9EPV3 Probable RNA methyltransferase sce3898 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=Y3898_SORC5 Length = 393 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 117/392 (29%), Positives = 177/392 (45%), Gaps = 51/392 (13%) Query: 8 PENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 PE + G I+L D R + LGE P RA ++ + Sbjct: 3 PEELAGACG-IDLTDARR--IVSLAHRLGELPARAPATVR-----------------RAA 42 Query: 68 RGKLKEVAEIRAPEVVEEQRS-SDGTIKWAIAVGDQ-RVETVYIP--EDDRATLCVSSQV 123 + EIR +VE + S D +K+A + D VE+V IP R + CVSSQV Sbjct: 43 LDAARSAGEIRTLALVERRASAEDPFVKYAFRLEDGATVESVRIPLERPGRYSACVSSQV 102 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLL 183 GCAL C FC+T + G RNL EI+ QV + + A V G + V+ GMGEPL Sbjct: 103 GCALACAFCATGRMGLTRNLEAWEIVEQVRLIRRDLDAT-VGGGARVHGVLFQGMGEPLA 161 Query: 184 NLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDEIR 242 N + V+ A+ ++ + + R +T+ T+G+ + +L ++ V L +SL + R Sbjct: 162 NADRVIQAIRVLSEPSAQAIDMRNITVCTAGLPSGIRRLAAEVPAVRLGLSLGSVRPGKR 221 Query: 243 DEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDT 302 ++PI+ + +E LAAV + S Y +L ND E A LA L + Sbjct: 222 RLLMPIDGAHPLEEVLAAVGEHARASGHAP---MWAYTLLADQNDTDEDAACLAALARGF 278 Query: 303 PC------KINLIPWNPF--PGAPYGRSS--------------NSRIDRFSKVLMSYGFT 340 +++LIP+N PG P ++R+D F VL + G Sbjct: 279 AAQHGISPRLSLIPYNAIGAPGDPLPSPDGGDERGASADPFVRSARLDAFRAVLSAAGVG 338 Query: 341 TIVRKTRGDDIDAACGQLAGDVIDRTKRTLRK 372 +IVR + G D+ AACGQLA + + R+ Sbjct: 339 SIVRYSGGGDVGAACGQLARPSAEAQRPGGRR 370 >UniRef50_A4S5T8 Predicted protein n=7 Tax=Viridiplantae RepID=A4S5T8_OSTLU Length = 254 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 99/234 (42%), Positives = 154/234 (65%), Gaps = 8/234 (3%) Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC TA+ G +NL ++I+ QV +A ++VGA++ ++NVV MGMGEPL N++ Sbjct: 1 MNCQFCYTAKMGLRKNLSAAQIVEQVVQARRMVGASE------VSNVVFMGMGEPLHNVD 54 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIV 246 V+ A+ I+LD G G S+ +VT+STSG+VP +++ + +LA+SL+A D IR+ I+ Sbjct: 55 EVLKAVSILLDPKGLGFSRNKVTVSTSGLVPQMERFLRESEASLAVSLNATTDYIRNWIM 114 Query: 247 PINKKYNIETFLAAV-RRYLEKS-NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC 304 PIN+KYN+E L + R + +S +Q +V EY+ML+ VND E A +L E+ +D PC Sbjct: 115 PINRKYNLEMLLGLLRREFPRQSLGRHQRQVFFEYIMLEGVNDSDEDADRLVEIARDIPC 174 Query: 305 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 KINLI +N G+ + S RI+ F + + G T +R++RGD+ +ACGQL Sbjct: 175 KINLIYFNTHDGSEFKCSDQERINAFRQRVSDAGVTCTIRQSRGDEEMSACGQL 228 >UniRef50_Q01C13 Homology to unknown gene n=1 Tax=Ostreococcus tauri RepID=Q01C13_OSTTA Length = 368 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 150/310 (48%), Gaps = 33/310 (10%) Query: 64 NKVLRGKLK---EVAEIRAPEVVEEQRSSDG-TIKWAIAVGD-QRVETVYIPE-DDRATL 117 +++ +L+ E+ V E SSDG T K + + D ++E + R TL Sbjct: 7 PRIVVERLRDGTSGFELYTTRVAHESASSDGSTTKLIVELQDGHKIEACVMRHAKGRTTL 66 Query: 118 CVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMG 177 CVSSQVGC + C FC+T G NL EI+ Q+ A ++ Sbjct: 67 CVSSQVGCKMGCTFCATGTLGELGNLASFEILEQLAHANRVAA----------------- 109 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHA 236 PL N ++V+ A+ +M DD F LS ++T+ST GV+P + L D LA+SLHA Sbjct: 110 ---PLNNYDSVIEAIGVMTDDKAFALSASKITVSTVGVIPRMRTLTRDAPGTCLALSLHA 166 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 P E+R +IVP Y ++ + + YL ++ + + IEY +L VND A +L Sbjct: 167 PTQELRQKIVPTATAYKLDDLMRVLEEYL--ASGPKMKTMIEYCVLGGVNDDETCAEKLG 224 Query: 297 ELLKDTPCKI--NLIPWNPFP-GAPYGRSSNSRIDRFSKVL-MSYGFTTIVRKTRGDDID 352 EL + KI NLIP NP A + + + + ++L YG R T GDDI Sbjct: 225 ELFRGKEEKIILNLIPLNPTDTPAGHVPPTPEAVRKMMEILMKKYGLFVTRRHTMGDDIA 284 Query: 353 AACGQLAGDV 362 ACGQLA Sbjct: 285 GACGQLALKT 294 >UniRef50_B8ZNC2 Radical SAM superfamily protein n=7 Tax=Streptococcus RepID=B8ZNC2_STRPJ Length = 300 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 112/362 (30%), Positives = 166/362 (45%), Gaps = 69/362 (19%) Query: 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76 K ++ L Q M+E+ + GEK FRADQ+ +W+Y +F+EMT+++K L KL + Sbjct: 2 KPSIHSLVHQTMQEWVLEQGEKKFRADQIWEWLYRKRVQSFEEMTNLSKDLIAKLNDQFV 61 Query: 77 IRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTA 135 + + Q S+DGT+K+ + D +ETV + + ++ C T Sbjct: 62 VNPLKQRIVQESADGTVKYLFELPDGMLIETVLMRQHYGLSV--------------CVTT 107 Query: 136 QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIM 195 Q G N + + QR + N GE +IM Sbjct: 108 QVGCN-------------IGCTFCASGLIKKQRDLNN------GE---------IVAQIM 139 Query: 196 LDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIE 255 L F + + V LA+SLHAPN+E+R + IN+ + IE Sbjct: 140 LVQKYFA--------------------DEGVQVNLAVSLHAPNNELRSSTMKINRAFPIE 179 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP--CKINLIPWNP 313 AA+ Y+E +N RVT EY+ML+ VNDG E A +LAELLK+ +NLIP+NP Sbjct: 180 KLFAAIEYYIETTNR---RVTFEYIMLNEVNDGVEQALELAELLKNIKKLSYVNLIPYNP 236 Query: 314 FPGAP-YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRK 372 Y RS R+ F L G +VR+ G DIDAACGQL + + R ++ Sbjct: 237 VSEHDQYSRSPKERVLAFYDTLKKKGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAVA 296 Query: 373 RM 374 + Sbjct: 297 AV 298 >UniRef50_B8LDJ4 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDJ4_THAPS Length = 319 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 104/309 (33%), Positives = 142/309 (45%), Gaps = 39/309 (12%) Query: 81 EVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPE-----------------DDRATLCVSSQ 122 +V SSDGT K + + D VETV IP R T+C+SSQ Sbjct: 19 SLVHTSTSSDGTTKLLLRLMDGLEVETVLIPFWADVAQKKRINEKDNSSLGRTTVCISSQ 78 Query: 123 VGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL 182 VGC C FC+T + G R+L EI+ Q++ A K+V PITN+V MGMG+ Sbjct: 79 VGCRQGCTFCATGRMGKLRSLTTDEILAQLFYAKKVVRVVLP----PITNIVAMGMGDAA 134 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA-LDKLGDMIDVALAISLHAPNDEI 241 N++ V A+ IM F S RVT+ST P D LA S+HA DE+ Sbjct: 135 DNVDAVKGAINIMTRRELFQFSASRVTVSTVAPSPQAFLDFADS-KCILAWSVHATRDEL 193 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 R ++VP K Y + + L++ IE ++D VND A +LAE L Sbjct: 194 RKQLVPTTK-YPMVELRQGLIDALKQ--RKLRTCMIEVALMDGVNDSMREAEELAEFLTY 250 Query: 302 TPCKI-------NLIPWNPFPG-----APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD 349 ++ NLIP+N Y + S ++ F K L VR TRGD Sbjct: 251 ITNEVPGSKLLCNLIPYNDIGEGAGGVVAYRKPSMEKVMAFQKRLQELSVYAHVRGTRGD 310 Query: 350 DIDAACGQL 358 + ++ACGQL Sbjct: 311 EENSACGQL 319 >UniRef50_B6KND1 GPI transamidase 8, putative n=3 Tax=Toxoplasma gondii RepID=B6KND1_TOXGO Length = 270 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 125/265 (47%), Gaps = 21/265 (7%) Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 GCA C FCS + GF R L EI QV + I +V MGMGEP Sbjct: 8 AAGCAFNCSFCSVGKSGFLRQLSADEITDQVLFFLR--------QGIKIDSVSFMGMGEP 59 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDE 240 L N + A+ I+ D F S R++ +ST GV+P + KL + V LA SLH+P E Sbjct: 60 LAN-PKMFDAIRILTDPLLFNFSARKLAVSTLGVLPGIKKLTEEHPQVNLAFSLHSPFPE 118 Query: 241 IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK 300 R+ +VP N+ + +E + L K+ R+ I Y+++ N+ EHA LA LL+ Sbjct: 119 ERNILVPANRMFPMEEVFDLLDERLAKTGR---RIWISYILIKGRNNTEEHAKALAALLR 175 Query: 301 DTP------CKINLIPWNPFPG--APYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDID 352 + +N+IP+N G + S + ++ F+ +L + R T G ID Sbjct: 176 ERRRPTRHLYHVNVIPYNTAQGVESSMQPPSAAEVNHFTDLLRKLHLSVSRRHTIGSAID 235 Query: 353 AACGQLAGDVIDRTKRTLRKRMQGE 377 AACGQ+ + RK Q + Sbjct: 236 AACGQMHAEYEVGQLTKQRKAQQAD 260 >UniRef50_Q3SHI2 Probable RNA methyltransferase Tbd_1951 n=22 Tax=Bacteria RepID=Y1951_THIDA Length = 362 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 100/359 (27%), Positives = 168/359 (46%), Gaps = 24/359 (6%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMK-WMYHYCCDNFDEMTDI--NKVLRGKLKEVA-EIR 78 + ++R+ +D G P A +V++ W+ DN + + LR L + E+R Sbjct: 1 MRLPELRQRLRDHGAAPCHAGRVLRAWVAGRPLDNRRQRAEDFLPLRLRNALPGLFDELR 60 Query: 79 AP-EVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 +V E DG+ + + + D Q VE+V +P D +CVS+QVGCA+ C FC T + Sbjct: 61 NLAQVHSEHPGEDGSARLLVRLADGQTVESVLLPRDG---VCVSTQVGCAVGCVFCMTGR 117 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 G R L +EI+ QV A +RP+ VV MGMGEP NL+NV+ A+E++ Sbjct: 118 AGLLRQLSGAEIVAQVVLAR---------SRRPVRKVVFMGMGEPAHNLDNVLDAIELLG 168 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIE 255 + G + + + ST G ++L + A A+SLH + +R ++P + Sbjct: 169 LEGG--IGHKNLVFSTVGDRRVFERLPQSTVKPARALSLHTTDRALRRRLLPRAPDIAPQ 226 Query: 256 TFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP 315 + Y ++ + ++ +L+ +ND +A LL +NLIP+N Sbjct: 227 ELVELGEAYARRTGYP---IQYQWTLLEGINDTEAELEGIARLLAGRYAVMNLIPYNATE 283 Query: 316 GAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRM 374 + R S +R ++ L G +R + G D+D CGQL +D R+ + Sbjct: 284 ADGFNRPSWARAAEMARRLHRRGVLAKLRHSAGQDVDGGCGQLRARALDAAPVLARRPL 342 >UniRef50_B3LAU1 Radical SAM protein, putative n=4 Tax=Plasmodium RepID=B3LAU1_PLAKH Length = 377 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 23/302 (7%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE--IR 78 + + +R Q++ MY + +M ++ +R ++K++ + Sbjct: 3 KSKRYASLLKMMDRNSFPKYRLQQILDNMYKAKITSVSKMKNVPTNIRREMKKIFSENLL 62 Query: 79 APEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQ 137 + + ++E + D K D +++E + +LC+SSQ+GC+ CKFC+T Q Sbjct: 63 SIKPLKEYKF-DRAYKVLFECKDKEKIEATSLDFGSHKSLCISSQIGCSFACKFCATGQI 121 Query: 138 GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD 197 G R L + EI Q+ + + NV MGMGEPL N +V +++ + Sbjct: 122 GIKRQLELDEITDQLLYFQ--------SKNENVRNVSFMGMGEPLAN-PHVFESIKFFNN 172 Query: 198 DFGFGLSKRRVTLSTSGVVPALDKLGD-MIDVALAISLHAPNDEIRDEIVPINKKYNIET 256 F LS RR+ +ST G++P + KL D V L+ SLH+P E RD++VPINK + Sbjct: 173 VNLFSLSSRRINISTVGLLPGIKKLNDLHPQVNLSFSLHSPFSEERDKLVPINKLFPFHE 232 Query: 257 FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP------CKINLIP 310 L + + ++ RV I Y++L VND +HA L + P + LIP Sbjct: 233 VLDLLDSRIARTGR---RVWISYILLKDVNDSKDHAEALCNHIVQRPRAVRYLYNVCLIP 289 Query: 311 WN 312 +N Sbjct: 290 YN 291 >UniRef50_C6P0S6 Radical SAM domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0S6_9PROT Length = 412 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 98/413 (23%), Positives = 164/413 (39%), Gaps = 88/413 (21%) Query: 23 LNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFD---EMTDINKVLRGKL----KEVA 75 + +R+ DLG KP D++++ C + T LR +L E+ Sbjct: 1 MRISHLRQRLYDLGAKPCHEDRLLRGWSQVCSYDRKGSPAETFFPLALRNELPGIEAELD 60 Query: 76 EIRAPEVVE----------------EQRSSDGTIKWAIAVGDQR-VETVYIPEDDRATLC 118 + + ++ + I + D + VE+V +P LC Sbjct: 61 GLARLKSEHPDTLTLPLSQGERELNRHSDNEKVARLLIELHDGQMVESVLLPRGG---LC 117 Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM 178 VS+QVGCA+ C FC + + G R L +EI+ QV A K +R ++ VV MGM Sbjct: 118 VSTQVGCAVGCVFCMSGRDGLLRQLGSAEIVAQVVLARK---------RRAVSKVVFMGM 168 Query: 179 GEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-------------- 224 GEP NL+NV+ A+E++ + + + LST G + ++L + Sbjct: 169 GEPAHNLDNVLEAIELLGTQG--NIGHKNLVLSTVGDLRVFERLMEGLTHKPSPQPSGGT 226 Query: 225 ---------------------------------MIDVALAISLHAPNDEIRDEIVPINKK 251 + ALA+SLH ++ +R ++P + Sbjct: 227 TDHSTRPSENNGQVAGHPACGRGGNRERQSSIAAVKPALALSLHTTDEVLRTRLLPQAPR 286 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 +E + Y + V ++ +++ VND ++ +LLK +N IP+ Sbjct: 287 IPVEELVERAEIYARATGYP---VQYQWTLIEGVNDSDAELARIVQLLKGKYAIMNFIPF 343 Query: 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 N G Y R S RI + L G + VR + G +I+ ACGQL Sbjct: 344 NEVDGLTYRRPSGERIAAMAYALNGQGIYSRVRDSAGQEIEGACGQLRARAAK 396 >UniRef50_B8BRJ2 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRJ2_THAPS Length = 438 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 101/377 (26%), Positives = 162/377 (42%), Gaps = 51/377 (13%) Query: 11 VTTKDGKINLLDLNRQQMREFF---KDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVL 67 V + DLN F + LG ++ Q YH ++ + +D + + Sbjct: 82 VAETGALTSAADLNTISNEHGFDKGQGLGMSAWKKLQSSMQQYHATANDPTQQSDND-SM 140 Query: 68 RGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV--GDQRVETVYIPEDDRA--TLCVSSQV 123 +A + +V SSDGT K + + VE+V IP D+ TLCVS Sbjct: 141 YSINDSIASLSHMKV-----SSDGTTKLLLKMVKDGLEVESVIIPWMDKGFSTLCVSWAA 195 Query: 124 GCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGA------AKVTGQRPITNVVMMG 177 G V ++ ++ A+KI + P+ N+V MG Sbjct: 196 G------------------KDVHSVLPDMYYASKICRVVESIPGNENKALPPVDNIVFMG 237 Query: 178 MGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAP 237 MGEP N + VV A+ ++D FG+ + ++T+ST P+ ALA S+HA Sbjct: 238 MGEPADNADAVVRAVNTLVDRRMFGVGQSKITISTVAPDPSAFATLGSAPAALAWSVHAV 297 Query: 238 NDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAE 297 +D +R ++VP K Y++E A + + L + R +E ++ VND + A L+E Sbjct: 298 DDSLRRQLVPTTK-YSMEELRAGLVKALSLRSNKLRRTMLEVALMKDVNDSPDDARLLSE 356 Query: 298 L-------LKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYG------FTTIVR 344 ++ + +NLIP+N Y S R+ F K+++ G VR Sbjct: 357 FAMSIMKEVRGSKIVVNLIPFNDIGHPTYRTPSMERVLEFQKIVVESGDNCDTQVLCYVR 416 Query: 345 KTRGDDIDAACGQLAGD 361 TRGD+ +ACGQLA Sbjct: 417 TTRGDEESSACGQLATK 433 >UniRef50_C5KHT4 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KHT4_9ALVE Length = 308 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 17/286 (5%) Query: 24 NRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVA-EIRAPEV 82 ++ E + ++ V++ ++ + + + + +R L+ E +P Sbjct: 35 RLSEIVECLEKERTPEWQIGLVIQDVFKKGVSSPSAINRVPQGVRDALQARLGESLSPLR 94 Query: 83 VEEQRSSDGTIKWAIAV--GDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFN 140 V EQ S+D K+ + ++E V + +LCVSSQ+GCA C FC+T + G Sbjct: 95 VLEQGSADFAHKFLLESRQDGGKIEAVGLDFRSHTSLCVSSQIGCAFNCSFCATGKLGLK 154 Query: 141 RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFG 200 R L V EI+GQV + +V MGMGEPL N + A+ +M D Sbjct: 155 RQLSVDEIVGQVLMFR--------ATGNVVDSVSFMGMGEPLAN-PKIFNAISVMTDPQL 205 Query: 201 FGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 GLS RR+++ST G++P L KL ++ +A SLH+P E R++I+PI + Y Sbjct: 206 VGLSTRRMSISTIGIIPGLVKLTELHPQANVAYSLHSPFPEEREKIMPIQRVYPFAKVFD 265 Query: 260 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA-HQLAELLKDTPC 304 + ++++ R+ I Y++L +ND +A ++ LK P Sbjct: 266 VLDDRIKRTGR---RIWISYLLLKGINDSERYATYEAKNALKRKPA 308 >UniRef50_A8J882 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J882_CHLRE Length = 239 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 90/239 (37%), Positives = 119/239 (49%), Gaps = 11/239 (4%) Query: 127 LECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLN 186 + C+FC T ++G NL + Q+ + PITN+V MGMGEPL N Sbjct: 1 MNCQFCFTGRRGLLGNLSTA----QIIEQPQPRPQQSQQAPPPITNLVFMGMGEPLHNPT 56 Query: 187 NVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGD-------MIDVALAISLHAPND 239 V A++I+ G +S RVTLST G++P L D V LA+S+HA D Sbjct: 57 AVFAAIDILAHRHGLAMSPSRVTLSTVGLLPQLQHFLDSSRGEGGRARVCLAVSIHAGTD 116 Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E+R IVP N + ++ + + V EY +L VND E A L E Sbjct: 117 ELRGAIVPSNTRLSLPPAGFSPSNNTIRPLRAGRYVLFEYTLLRGVNDRPEDAAALLEAT 176 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQL 358 KD C NLI +NPFPG Y S+ R+ F KVL + G VR ++GDD AACGQL Sbjct: 177 KDIECSFNLIMFNPFPGTLYSPSTPERLLAFQKVLWAAGRIVHVRLSKGDDGMAACGQL 235 >UniRef50_UPI0001698B51 radical SAM enzyme, Cfr family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B51 Length = 220 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 106/223 (47%), Positives = 145/223 (65%), Gaps = 7/223 (3%) Query: 18 INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 77 NL++L+++ M F +LG K F V KW++ +F++MTDI+K LR +L+ +AEI Sbjct: 4 TNLMELDQRSMERCFVELGSKAFHGRNVFKWIHKQGVIDFNQMTDISKRLRVQLESLAEI 63 Query: 78 RAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQ 136 R PE+V EQ + DGT KW + + D QR+ETVYIP+ +R+T+CVSSQVGCAL C FCST Sbjct: 64 RLPELVFEQPARDGTRKWVLQLDDGQRIETVYIPDGERSTICVSSQVGCALNCSFCSTGS 123 Query: 137 QGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIML 196 GF + G +R +G V P TN+V+MGMGEPL N + VV AM+IM Sbjct: 124 PGFQ----PQSLGGGDYRPG--LGWPAVNWWHPPTNIVLMGMGEPLANFDAVVTAMDIMQ 177 Query: 197 DDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPND 239 DD + LSK RVT+STSG+VPAL +L ++ DV+LA + Sbjct: 178 DDSAYMLSKYRVTISTSGIVPALRQLREVSDVSLARVAACADQ 220 >UniRef50_Q3EPJ3 Radical SAM family enzyme n=1 Tax=Bacillus thuringiensis serovar israelensis ATCC 35646 RepID=Q3EPJ3_BACTI Length = 246 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 11/239 (4%) Query: 3 EQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTD 62 E V + + K ++ L +M+++ K+ GE FRA Q+ W+Y N+++M++ Sbjct: 2 ETTVRKQKKNVETKKPSIYSLQIHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSN 61 Query: 63 INKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSS 121 ++K LR KL +I + +Q SSDGTIK+ + D +ETV + + ++CV++ Sbjct: 62 LSKGLRDKLSNSFDITTLNTLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVTT 121 Query: 122 QVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 QVGC + C FC++ G RNL EI+ QV + + + ++++V+MG+GEP Sbjct: 122 QVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALDETE----ERVSSLVVMGIGEP 177 Query: 182 LLNLNNV--VPAMEIMLDDFGFGLSKRRV-TLSTSG--VVPALDKLGDMIDVALAISLH 235 N +N + + + F + R + + T G + L + L + H Sbjct: 178 FDNYDNXNGILTHHLTTEKRSFIIGGRTIRLVRTEGELIPRKFISLLKK-NYKLILRFH 235 >UniRef50_B1AIK2 Putative uncharacterized protein n=15 Tax=Ureaplasma RepID=B1AIK2_UREP2 Length = 336 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 164/352 (46%), Gaps = 23/352 (6%) Query: 13 TKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 72 + L+ +++E LG K F + Q+ W+Y NFD+ ++I K LK Sbjct: 4 NNHNLKEIYSLSLNELKEELFKLGLKSFISKQIYSWIYQKRIFNFDKFSNIAKNNVIILK 63 Query: 73 EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFC 132 E ++ Q +SDG+IK+ + I + L + G + + Sbjct: 64 ENFSNNLLKINSYQSNSDGSIKFEFLTDKNLIINCMIIKFKNGFLIKINPFGINFKKEII 123 Query: 133 STAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAM 192 NL +E++ Q+ + + K+ ITNV++ G+ + LLN++ V + Sbjct: 124 ---------NLSTNELVLQILLIQQFLDQRKLGN---ITNVIIKGLQDSLLNMDVVSNFI 171 Query: 193 EIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDM-IDVALAISLHAPNDEIRDEIV--PIN 249 I+ ++ G + KR++ + TSG+ L K G + + L IS++A N I +I+ +N Sbjct: 172 NIINNENGLNIGKRKIAVWTSGINVDLIKWGQLQNQIELIISMNASNSLIYQKIMLKKLN 231 Query: 250 KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLI 309 + ++ + ++ Y + +N RV +EY+++D +ND +A++L ELLK+ C + LI Sbjct: 232 QNWSFLKLIEQIKAYTKITNN---RVVLEYLLIDKINDDLNYANELVELLKNILCYVLLI 288 Query: 310 PWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGD 361 P+N Y S + +D F +L R + +D+D + QL Sbjct: 289 PYN---LNNYRTS--ANLDDFFNILSVNKIRISKRIRKSNDLDISFKQLKIK 335 >UniRef50_D0MX90 Ribosomal RNA large subunit methyltransferase N, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MX90_PHYIN Length = 224 Score = 210 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 13/225 (5%) Query: 11 VTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGK 70 + K L +++ + F + K A + +++ + F ++ I K LR Sbjct: 1 MVKKRTLSPLPAFDQKALPVFLQKHDFKELHALTIWRYLAQHPDATFADIPGIPKTLRTL 60 Query: 71 LKEVAEIRAPEVVEEQRSSDGTIKWAIAVGD-QRVETVYIPEDDRATLCVSSQVGCALEC 129 L E V EQRS+DGT+K + + D +E V + R TLCVSSQVGC + C Sbjct: 61 LGEHFAHFTTSVTTEQRSADGTVKLLLKLQDGHEIEAVIMRHTGRNTLCVSSQVGCQMGC 120 Query: 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVV 189 FC+T G +L EI+ Q+ A ++ PI NVV MGMGEPL N + V+ Sbjct: 121 TFCATGTLGIIADLCSGEILEQLAHANRV---------APIRNVVFMGMGEPLNNYDAVL 171 Query: 190 PAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAIS 233 A+ M FGL+ + +TLST GV+ + +L D V LA+S Sbjct: 172 AAIRAMT--KVFGLAPKYITLSTVGVIHRIRQLSRDAPLVRLALS 214 >UniRef50_C0QTQ8 Radical SAM enzyme, Cfr family n=4 Tax=Aquificales RepID=C0QTQ8_PERMH Length = 271 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 24/270 (8%) Query: 93 IKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQ 151 + I D VE+VY D TLCVSSQ+GC + C FC++ G RNL EII Q Sbjct: 13 RLFEIETEDHFTVESVYYRGD---TLCVSSQLGCPVRCSFCASGMNGLIRNLSYDEIIDQ 69 Query: 152 VWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLS 211 A V+ I N+ G+GEPLLN NV A D + Sbjct: 70 YRIA--------VSEGMEIKNIAFAGIGEPLLNWENVKKAFYHFKDIGLKA------SFY 115 Query: 212 TSGVV-PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNA 270 T+G +L ++ +++SLHA DE R +++P + ++ L + +L K + Sbjct: 116 TTGFPLKNFKELLELPHNGVSLSLHAVTDEKRKQLIPYGQ--PLDQILDVFKDHLSKLSR 173 Query: 271 NQGRV-TIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDR 329 + ++ +I Y+++ VND E +L+++ +D ++L+ +N G Y +S+ +R Sbjct: 174 RKRKMYSIAYLLIGGVNDSEEEIQKLSQIARDLQVGVSLLKYNEIDGIDYRSTSDEEYER 233 Query: 330 FSKVLMSYGFTTIV-RKTRGDDIDAACGQL 358 L G + + R I CG L Sbjct: 234 VFLQLRENGIRVTLSNRYRTRKI-GGCGTL 262 >UniRef50_C1DT21 Radical SAM enzyme, Cfr family n=3 Tax=Sulfurihydrogenibium RepID=C1DT21_SULAA Length = 276 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 25/289 (8%) Query: 83 VEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNR 141 V + + D + I D +E+V R TLCVSSQVGC+++C FC++ G R Sbjct: 3 VVKIINDDLNTLFEIKTDDGYTIESV----HYRKTLCVSSQVGCSIKCSFCASGLNGLTR 58 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGF 201 NL EII Q I ++ G+GEPLLN NV A + Sbjct: 59 NLSFDEIINQYLMVK--------DKGYEIESIAFAGIGEPLLNWENVKQAFDYFKSQGLS 110 Query: 202 GLSKRRVTLSTSGVV-PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAA 260 V+ T+G +L + + +SLH+ +E R ++P + I + Sbjct: 111 ------VSFYTTGFPISNFKQLLALNHDGVNLSLHSVFEEKRKSLIP--NSHTISQLIQV 162 Query: 261 VRRYLEK-SNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPY 319 + +L++ SN + I Y+++ ND E +L E+ K+ ++L+ +N PY Sbjct: 163 FKDHLQQLSNRKKKLYNIAYILIYGENDSYEEIDKLGEIAKELGIGVSLLKYNEIEFFPY 222 Query: 320 GRSSNSRIDRFSKVLMSYGFTTIV-RKTRGDDIDAACGQLAGDVIDRTK 367 + R + L G + K R I CG L + ++ K Sbjct: 223 KSVPDDRYEELFLRLREKGIRVTLSNKYRTRKI-GGCGTLMVNRLELHK 270 >UniRef50_UPI00006DCC08 hypothetical protein CdifQ_04003012 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCC08 Length = 183 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 10/188 (5%) Query: 14 KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKE 73 + KI L + +++EF K + EKPFR Q+ W+Y FD+M +I K LR KL+E Sbjct: 2 EKKKIVLKNFTEDELKEFMKTIDEKPFRGSQIFSWIYK-GAKTFDDMNNIPKSLRNKLEE 60 Query: 74 VAEIRAPEVVEEQRSS-DGTIKWAIAVGDQRV-ETVYIPEDDRATLCVSSQVGCALECKF 131 V+ I ++ + S D T K+ + D + ETV + D R T+CVS+QVGC + C F Sbjct: 61 VSCIGNIDIELKLESKVDNTKKYLFLLDDGNIIETVMMDYDSRVTVCVSNQVGCRMGCNF 120 Query: 132 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPA 191 C++ G RNL EI+ QV + + + ++N+V+MG GEPL N N Sbjct: 121 CASTMDGLIRNLEPWEILDQVIKIQE-------DTGKRVSNLVLMGSGEPLDNFENTKQF 173 Query: 192 MEIMLDDF 199 ++I+ + Sbjct: 174 LKIINEKK 181 >UniRef50_Q4HQT8 Radical SAM enzyme, Cfr family n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HQT8_CAMUP Length = 286 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 30/241 (12%) Query: 19 NLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIR 78 N+LDL +++ E + FR Q+ +W+Y D+F +M+++ K LR +L + Sbjct: 6 NILDLLPEELNEKI----QPMFRVKQICQWIYQKYADDFSKMSNLPKNLREELAKNYHFE 61 Query: 79 APEVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDD-------------RATLCVSSQVG 124 + ++E+RS DG+IK+ + D R+E+V +P + + T+CVSSQVG Sbjct: 62 PLKCIKEERSKDGSIKYLFELEDGLRIESVLLPMKEEKFDEEGKRLSHAKFTICVSSQVG 121 Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN 184 C C FC TA+ G RNL EI+GQ+ + + +R + N+V MGMGEPL N Sbjct: 122 CRSGCSFCLTAKGGLKRNLSAGEIVGQILWIKR---QNHIPYERRV-NIVYMGMGEPLDN 177 Query: 185 LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALD------KLGDMIDVALAISLHAPN 238 LNNV A+ D + + + G+ ++ KL + I + + L P+ Sbjct: 178 LNNVAKAVREFPIDMRKKVMFEYLLID--GINDKIEHAKELVKLLNGIKAKVNLILFNPH 235 Query: 239 D 239 Sbjct: 236 Q 236 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 63/125 (50%) Query: 240 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL 299 E R IV + ++ + E + +V EY+++D +ND EHA +L +LL Sbjct: 161 ERRVNIVYMGMGEPLDNLNNVAKAVREFPIDMRKKVMFEYLLIDGINDKIEHAKELVKLL 220 Query: 300 KDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 359 K+NLI +NP G+ Y R + +F +L G T +R+++G DI AACGQL Sbjct: 221 NGIKAKVNLILFNPHQGSIYKRPNLENAVKFQDLLSQKGVTCTIRESKGLDISAACGQLK 280 Query: 360 GDVID 364 + Sbjct: 281 EREKN 285 >UniRef50_C5K4P4 Putative uncharacterized protein n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K4P4_9ALVE Length = 242 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 15/176 (8%) Query: 201 FGLSKRRVTLSTSGVVPALDKLG-DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLA 259 FG+ +R +T+ST GV+P + L D V LA+SLHAP +R++IVP K ++I+ +A Sbjct: 5 FGIPQRCITVSTVGVIPRIRSLAHDASGVKLALSLHAPTQALREKIVPSAKAWSIDELMA 64 Query: 260 AVRRYLEKSNANQGR------------VTIEYVMLDHVNDGTEHAHQLAELLKDTPCKIN 307 AV Y E S V IEYV++ VND E AHQL L+K+ +N Sbjct: 65 AVDEYSEASRVAGRPDGSGGGGRKKGSVMIEYVVIRDVNDTEECAHQLGVLMKNRKAVVN 124 Query: 308 LIPWNPFP-GAPYGRSSNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDAACGQLAGD 361 IP+N G+ + S + R +L YG R+ G DIDAACGQLA Sbjct: 125 FIPYNAVDNGSNFEPPLESSVTRMVSILKDVYGVRVYYRRHHGRDIDAACGQLAKK 180 >UniRef50_C1SGI6 Predicted Fe-S-cluster redox enzyme n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGI6_9BACT Length = 256 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 40/279 (14%) Query: 97 IAVGDQR-VETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRA 155 + + D +ETVY + TLC+S+Q GC + C FC++ + G RNL E+ QV Sbjct: 8 LELSDGFCLETVYY---ESGTLCISTQAGCRMACPFCASGRVGLKRNLSSDELFTQV--- 61 Query: 156 AKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV 215 ++ I V + G+GEPL N V ++ S V+++TS Sbjct: 62 -------ELHKGNDIKRVTLSGIGEPLDNFEVVKEFIKK---------SGYPVSVTTS-- 103 Query: 216 VPALDKLGDMIDV---ALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRR-YLEKSNAN 271 VP +KL +++ + + +S HA DE R +++P K ++ AV + E S Sbjct: 104 VPDTEKLKELLKLSHNGVMLSFHAGFDETRKKLIP--KACQLDEIFHAVSEVWSEISVNK 161 Query: 272 QGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNPFPGAPYGRSSNSRIDRF 330 + +V Y++LD +ND E A + + ++L+ N G+ + S Sbjct: 162 RKKVGFNYMLLDGINDSAEELDAFAGQVTNFKEVTVHLLVCNDVSGSSFKSPSVCVFTDA 221 Query: 331 SKVLMSYGFTTIV----RKTRGDDIDAACGQLAGDVIDR 365 ++L + G RK+ + CG L + + Sbjct: 222 YELLRNNGLNVRRANNWRKSS----NGGCGTLFLKTLQK 256 >UniRef50_A6GDS6 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDS6_9DELT Length = 291 Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 29/303 (9%) Query: 81 EVVEEQRSSDGTIKWAIAVGDQ-RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 +VEE R DG ++ + + D VE V D +LCVSSQVGCA+ C FC++ G Sbjct: 3 RIVEEHREGDGNRRFVVGLDDGASVEAVLYRLD---SLCVSSQVGCAVGCPFCASGANGL 59 Query: 140 NRNLRVSEIIGQVWRAAKIVGA-AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD 198 +R LR+ E+ GQV + A + V + G+GEPL N V + + Sbjct: 60 DRPLRLGELTGQVEAVRAHIEATDGPEAALALRRVTVSGVGEPLHNHEPVAQFVRWCRER 119 Query: 199 FGFGLSKRRVTLSTSGVVPALDKLGDMIDV-------ALAISLHAPNDEIRDEIVPINKK 251 +L+TSG L +LG+ +D + S+HA + R VP Sbjct: 120 DMPA------SLTTSGGP--LRRLGEWLDPDAAPPHNGITFSIHAGREATRARTVPRGPA 171 Query: 252 Y-NIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIP 310 + + L S + + ++ + Y++L +NDG E E KI+L Sbjct: 172 LGPLFSLLGEAI--PRLSRSRKRKLALAYLLLADLNDGDEEIDAFLERAAPLGVKIHLYR 229 Query: 311 WNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDI--DAACGQLAGDVIDRTKR 368 +NP P + S++R + + + G R++ I + CG L + R +R Sbjct: 230 YNPVPTSTQAPVSDARYQAIFERVRAVGLDV--RRSSQARIEDNGGCGTLIA--LRRPER 285 Query: 369 TLR 371 LR Sbjct: 286 RLR 288 >UniRef50_B8CKQ7 Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKQ7_SHEPW Length = 137 Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 83/124 (66%), Positives = 99/124 (79%), Gaps = 1/124 (0%) Query: 21 LDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAP 80 +DL+R+ MR F D+GEKPFRADQ+MKW+YH+ +F++MT+INK LR KL EI AP Sbjct: 1 MDLDRKSMRALFADMGEKPFRADQLMKWLYHFGVSDFEQMTNINKALRAKLARKCEIVAP 60 Query: 81 EVVEEQRSSDGTIKWAIAVG-DQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF 139 ++ Q+S+DGTIK+AI VG Q VETVYIPEDDRATLCVSSQVGCALEC FCST QGF Sbjct: 61 KIASYQKSADGTIKFAIDVGNGQEVETVYIPEDDRATLCVSSQVGCALECTFCSTGAQGF 120 Query: 140 NRNL 143 NR L Sbjct: 121 NRKL 124 >UniRef50_A7AF87 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AF87_9PORP Length = 260 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 17/203 (8%) Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI 170 +R + VS+ GC + CKFC+T RNL EI+GQV A + G Sbjct: 55 RSERWMIGVSTMSGCPVRCKFCATGNMKRYRNLTADEIVGQVEFAIEQAGFDPCDANEFK 114 Query: 171 TNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVAL 230 N MGEP LN+ V A+ + + + +ST G+ D +V L Sbjct: 115 IN--YTRMGEPFLNIEAVKEAIGRISEIY----PNTHHYVSTIGI-KGSDFSFVKGNVTL 167 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 ISLH+ ++E R+ ++P KK +IE + + TI + VN+ Sbjct: 168 QISLHSFDEEKRNWLIPYPKKMSIEELG-------RIRTESNLKTTINLTL---VNESDF 217 Query: 291 HAHQLAELLKDTPCKINLIPWNP 313 +L + + L P NP Sbjct: 218 DTEKLEKYFDKEYFFVKLSPINP 240 >UniRef50_Q5UP06 Uncharacterized protein R756 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=YR756_MIMIV Length = 298 Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 123/282 (43%), Gaps = 32/282 (11%) Query: 105 ETVYIPEDDRA-TLCVSSQVGCALECKFC---STAQQGFNRNLRVSEIIGQVWRAAKIVG 160 E Y+ +D+ + +SS GC + CKFC +T Q F R++ + E Q+ Sbjct: 22 ECRYVRRNDKYISAYLSSHNGCKMACKFCWLTATNQTNF-RHVSIEEYANQLDTVLSHGK 80 Query: 161 AAKVTGQRPIT-NVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSK---RRVTLSTSGVV 216 R + N+ +M GE L N N+V + + + ++K + ++ S ++ Sbjct: 81 EIDGENSRIVRVNINLMSRGEALAN-KNLVNNYDKFHKELQYIINKYDYSEMKMNVSTIM 139 Query: 217 PALDKLGDMID------VALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNA 270 P + + +ID V + SL++ N+ R + +P + +Y I A+R+ E Sbjct: 140 PKVVEHKKLIDIFGDRPVNIYYSLYSTNESFRKKWIPNSMRYEI-----ALRKLREFQKE 194 Query: 271 NQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC---KINLIPWNPFP-GAPYGRSSNSR 326 + + +++ ND +AE+++ K NL+ +NP P + Y S + Sbjct: 195 TDNTIAFHFAVIEDENDNLSDVQSMAEIIRSMNFSKTKFNLVRFNPHPSMSNYKEPSVEK 254 Query: 327 IDRFSKVLMSYGFTTIVRKTR-------GDDIDAACGQLAGD 361 +++ ++L S ++ R G D+ A+CG + Sbjct: 255 LEKIYEILQSVCNDETIKTNRSRIVPRIGQDVLASCGMFVDN 296 >UniRef50_B3FJU2 Putative uncharacterized protein n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJU2_9CAUD Length = 302 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 39/303 (12%) Query: 84 EEQRSSDGTIKWAIAVGDQ--RVETVYIPE-DDRATLCVSSQVGCALECKFC---STAQQ 137 Q D ++ + D R+E ++ DD + +SSQ GC C+ C +T Q Sbjct: 9 THQSELDRSVNFERKFEDHTGRLEARFVQRVDDYFIVYLSSQTGCKQACRMCWLTATGQT 68 Query: 138 GFNRNLRVSEIIGQVWRA----AKIVGAAKVTGQRPITNVVMMGMGEPLLN------LNN 187 +R++ V E Q R +V V + M GEPL N + Sbjct: 69 D-SRDVTVQEYFEQAERVFDHYIDMVRNNHVGSAATKVHFNFMARGEPLANKHFVENADE 127 Query: 188 VVPAMEIMLDDFGFGLSKRRVTLSTS-----GVVPALDKLGD-MIDVALAISLHAPNDEI 241 ++ ++ M + +G + + +ST G D D + L SL++ N + Sbjct: 128 ILRGLKRMAEQWGL---EAKFLISTIWPKEFGFTKLTDVFTDPEVYPELYYSLYSLNPKF 184 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 R + +P K ET L ++ + E + I Y ++ ND + + +K+ Sbjct: 185 RKQWLP--KAAAPETALDELKCWQEATGKTPK---IHYAFINDQNDSIGDVKAIIDEIKE 239 Query: 302 TPCKI--NLIPWNPFPGAPYGRSSNSRIDR----FSKVLMSYGFTTIVRKTRGDDIDAAC 355 K+ N++ +NP G + + L I R G D+ A+C Sbjct: 240 VGLKVNWNIVRYNPPEGHYSKEPVEGHVKYLHGFIQRHLPDAKVKLIPRV--GTDVKASC 297 Query: 356 GQL 358 G Sbjct: 298 GTF 300 >UniRef50_A7HKB3 Radical SAM domain protein n=12 Tax=cellular organisms RepID=A7HKB3_FERNB Length = 329 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 110/288 (38%), Gaps = 38/288 (13%) Query: 104 VETVY--IPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGA 161 VE+V IP D + L VS+ GC + CK C + R L EI+ Q+ + Sbjct: 46 VESVQPPIPRDKKWVLIVSTMDGCPVGCKMCDAG-GYYKRRLSKEEILAQILYLIRSRYE 104 Query: 162 AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA--- 218 +V ++ + +GEP LN + V+ ++ + ++ST + Sbjct: 105 DEVPVEKF--KIQFARVGEPALN-DEVLKVLDEL--PQIIDAPGLMPSISTVAPIGRNGW 159 Query: 219 LDKLGD------MIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ 272 ++L + L S+H+ +++ RDEI+P+ KK++ +++ Sbjct: 160 FERLIEIKEKHYRGKFQLQFSIHSTDEKQRDEIIPV-KKWSFREISEYGEKFVTT---ED 215 Query: 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPF-----PGAPYGRSSNSRI 327 ++T+ + + + A + I + P NP G + + Sbjct: 216 RKITLNFALAK---ENIADARVIMNFFNPEKFLIKITPVNPTYRSIENGLNSDVTGEGLV 272 Query: 328 ---DRFSKVLMSYGFTTIVRKTRG----DDIDAACGQLAGDVIDRTKR 368 F L G+ I+ + G + I + CGQ ++ K+ Sbjct: 273 LEHREFVDKLRESGYDVII--SVGELEENKIGSNCGQYVQRHLNAQKK 318 >UniRef50_P0A9N6 Pyruvate formate-lyase 1-activating enzyme n=287 Tax=Bacteria RepID=PFLA_ECO57 Length = 246 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 45/261 (17%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 E+ + Q GC + C +C T + + V +++ +V Sbjct: 8 HSFESCGTVDGPGIRFITFFQ-GCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHF 66 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV-- 216 + A+ V GE +L V + L T+G V Sbjct: 67 MNASGGG--------VTASGGEAILQAEFVRDWFRACKKE------GIHTCLDTNGFVRR 112 Query: 217 --PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGR 274 P +D+L ++ D+ + + L NDEI +V ++ +E + + + Sbjct: 113 YDPVIDELLEVTDL-VMLDLKQMNDEIHQNLVGVSNHRTLE--------FAKYLANKNVK 163 Query: 275 VTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPY------------G 320 V I YV++ +D + AH+L E +D KI L+P++ + Sbjct: 164 VWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVK 223 Query: 321 RSSNSRIDRFSKVLMSYGFTT 341 ++R +L YG Sbjct: 224 PPKKETMERVKGILEQYGHKV 244 >UniRef50_UPI0001698B52 radical SAM enzyme, Cfr family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B52 Length = 133 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Query: 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEH 291 +SLHAP +E+RD++VPIN+KY +E + A R +++ + ++T EYVMLD +ND +H Sbjct: 1 MSLHAPTNELRDQLVPINQKYPLEELIPACRDFIK--GDKRRKITWEYVMLDGINDSIQH 58 Query: 292 AHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIV-RKTRGDD 350 A L LL+ TP K+NLIP+NPFPG Y S S G ++ + + G+D Sbjct: 59 AKALIRLLEGTPSKLNLIPFNPFPGTSYKTSPRGAGRGISPAPDESGASSPLPARPAGED 118 Query: 351 ID 352 ID Sbjct: 119 ID 120 >UniRef50_UPI00016C3CF8 hypothetical protein GobsU_10628 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CF8 Length = 313 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 111/292 (38%), Gaps = 28/292 (9%) Query: 85 EQRSSDGTIKWAIAVGDQRVETVYIPE-DDRATLCVSSQVGCALECKFCSTAQQGFN--R 141 + + D ++ W R+E Y+ +D +SSQ GCA C+ C G R Sbjct: 14 HKSALDASVNWDRPAEVGRLEARYVRRCEDYFVAYLSSQTGCAQACRMCHLTATGQTHLR 73 Query: 142 NLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLD---- 197 + +E + Q + +M GEPL + E++ + Sbjct: 74 DTTFNEFLEQAETVLAHYRREGKPA--RAVHFNLMARGEPLASKVIATRGDELLGELSRL 131 Query: 198 DFGFGLSKRRVTLSTSGVVPA------LDKLGDMIDVALAISLHAPNDEIRDEIVPINKK 251 G GL R + +ST + P L+ + + + S+++ ++ R +P K Sbjct: 132 AVGSGLRPRHL-IST--IYPKAFGDRALEDVFVVHQPEIHYSIYSVSERFRRRWLP--KA 186 Query: 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELL--KDTPCKINLI 309 + E L + + S V + + + ND H + + L + IN++ Sbjct: 187 HPAEVALDRLAAWQRHSLKL---VVLHHAYIAGENDTEGDVHAICDALEERKLMAHINVV 243 Query: 310 PWNPFPGAPYGR-SSNSRIDRFSKVLMSY--GFTTIVRKTRGDDIDAACGQL 358 +NPF A +G + ++R + + G +V G D+ A+CG Sbjct: 244 RYNPFDPARHGTEPPEAVVERNAAIYRERLPGARVVVIARVGFDVAASCGMF 295 >UniRef50_Q080J6 Pyruvate formate-lyase activating enzyme n=12 Tax=Bacteria RepID=Q080J6_SHEFN Length = 245 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 88/262 (33%), Gaps = 45/262 (17%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 VE+ + Q GC + C++C T + + V EI+ QV Sbjct: 7 HSVESFGTVDGPGIRYIAFMQ-GCLMRCQYCHNRDTWDLDGGKEVSVDEIMSQVISYQPF 65 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV-- 216 + A+ + G GE +L V + L T+G V Sbjct: 66 LEASGGG-------ITASG-GEAILQAQFVSELFKACKSQGV------HTCLDTNGFVRK 111 Query: 217 --PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGR 274 P +D+L D D+ L + + +D E+ ++ + ++ + + Sbjct: 112 YEPVIDELLDNTDLVL-LDIKQMDDAKHIELTKVSNHRTL--------QFAQYLATRNIK 162 Query: 275 VTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPYG------------ 320 I YV++ + E A LAE +K K+ L+P++P + Sbjct: 163 TWIRYVVVAGFTEDVESAIALAEFIKPMSNVEKVELLPYHPLGEHKWQAFGETYTLADIS 222 Query: 321 RSSNSRIDRFSKVLMSYGFTTI 342 S + R +V + G Sbjct: 223 PPSTEIMQRIQQVFVDRGINAT 244 >UniRef50_B9PC33 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9PC33_POPTR Length = 302 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 68/131 (51%), Gaps = 13/131 (9%) Query: 2 SEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKP----FRADQVMKWMYHYCCDNF 57 L+ P+ K L+ L+R++M + +G R Q+ W+Y +F Sbjct: 175 RRALLRPD---PTVEKKPLIGLSREEMAQALASIGVPERQVNMRVRQLWHWLYVRGVSDF 231 Query: 58 DEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ------RVETVYIPE 111 M +I+K LR KL E I PE+VEEQ S DGT KW + + VETVYIPE Sbjct: 232 SRMFNISKELRAKLDEHFTIARPEIVEEQISQDGTRKWLLRFPPRGAGRPVEVETVYIPE 291 Query: 112 DDRATLCVSSQ 122 +DR TLC+SSQ Sbjct: 292 EDRGTLCISSQ 302 >UniRef50_C7RH90 Fe-S-cluster redox enzyme-like protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RH90_ANAPD Length = 322 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 100/260 (38%), Gaps = 31/260 (11%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGA 161 +RVE + + +D+ + VSSQ GC + C FC + GF+ N V+E+I ++ + G Sbjct: 46 ERVENIEVDLNDKLVVTVSSQKGCPMNCNFCDCPKLGFHGNSSVAELISEISTGIALSGV 105 Query: 162 AKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDK 221 NV MGEP N NV+ + +I+ + + +ST + + Sbjct: 106 KDGQRL----NVHYARMGEPTFNF-NVIESAKIVGEFANKHFKEYHPVVST-MLPKDNKR 159 Query: 222 LGDMI--------------DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK 267 L + + L S++ +E R++ NK +++ ++ Sbjct: 160 LEKFLLEWTSLMKSNNWNGGLGLQFSINTLYEEDRNKAFD-NKSLSLQQISDLAKKLPNP 218 Query: 268 SNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP---GAPYGRSSN 324 + T+ + + + +++ + + + P + Y Sbjct: 219 VGR---KYTLNFAVTS---ESDLDVNKMNKYFDKEKFVVKITPIHETKRAIENKYEIVKE 272 Query: 325 SRI-DRFSKVLMSYGFTTIV 343 + ++F K L+ G+ IV Sbjct: 273 FDVYEKFEKPLVEDGWDVIV 292 >UniRef50_D1SBC6 Pyruvate formate-lyase activating enzyme n=2 Tax=Actinomycetales RepID=D1SBC6_9ACTO Length = 275 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 85/256 (33%), Gaps = 42/256 (16%) Query: 106 TVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAA 162 +V + + GC L C++C T R V E++ R + + A Sbjct: 43 SVGVDGPGTRFVVFL--AGCPLRCRYCHSPDTWYGRSGRRRTVDEMVTLATRYRRFIQVA 100 Query: 163 KVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VPALD 220 V + G GEPLL + DD G L TSG V A D Sbjct: 101 GGG-------VTVSG-GEPLLQPAFTRELLRRCHDDLGL-----HTALDTSGFLGVRADD 147 Query: 221 KLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYV 280 L D D+ L + + A N + + + LA R+ ++ + I YV Sbjct: 148 ALLDATDLVL-LDVKAGNPQTYRRVTGTGR-------LAPTLRFAQRLADRGTPIWIRYV 199 Query: 281 MLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPY------------GRSSNSR 326 ++ + D + ++A++ ++ ++P++ Y Sbjct: 200 LVPGLTDAVDEVERVADVAAGLATVQRVEVLPFHRLGAHKYAELGLTFPLADTEPPDAGL 259 Query: 327 IDRFSKVLMSYGFTTI 342 + R + G T Sbjct: 260 LTRVRGQFAARGLTVT 275 >UniRef50_C1FL59 Glycyl-radical enzyme activating family protein n=17 Tax=Clostridiales RepID=C1FL59_CLOBJ Length = 301 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 92/274 (33%), Gaps = 61/274 (22%) Query: 108 YIPEDDRATLCVSSQVGCALE---------------CKFCSTAQQGFNRN--------LR 144 + ++R T C C + C FC N L Sbjct: 48 IMFFEERCTACGICVKRCPQKVITMKNNIPMVDEGKCNFCGKCTNFCPNNAREYVGKDLT 107 Query: 145 VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLS 204 EII ++ + + V G GEP+L+ + + I+ + G+ Sbjct: 108 SQEIIKEIIKDEVFYEQSGGG-------VTFSG-GEPMLHADFIN---GILEECKARGI- 155 Query: 205 KRRVTLSTSGVV--PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVR 262 T+ TSG V +K+ D +D+ L L + N+EI + + +E Sbjct: 156 --HTTIDTSGYVSWDKFEKVRDKVDLFL-YDLKSMNNEIHKKYTGVENTIILENL----- 207 Query: 263 RYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-CKINLIPWNPFPGAPYGR 321 E + + + ++ VND ++ + + + ++NL+P++ Y R Sbjct: 208 ---ELLSKYGHNIYLRIPIIKDVNDNNKNIDETIKFISKLHLIQVNLLPYHKMGMDKYKR 264 Query: 322 ------------SSNSRIDRFSKVLMSYGFTTIV 343 S+ +++ ++ G + Sbjct: 265 LKMEYKLTGEEKPSDEKMNEIAEKFKQAGIKVKI 298 >UniRef50_A7ZEI0 Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Campylobacter concisus 13826 RepID=A7ZEI0_CAMC1 Length = 275 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 99/271 (36%), Gaps = 47/271 (17%) Query: 114 RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK--VTGQRPIT 171 + + C ++C FC+ N N R + +V + V + ++ I+ Sbjct: 23 YGRVHLPVAPRCNIQCNFCNRIYDCANEN-RPG-VTAKVQTPDESVKFLEKLFKFRQDIS 80 Query: 172 NVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VPALDKLGDMIDVA 229 + + G G+P+ + + + E + LST+G+ +D++ + Sbjct: 81 VIGIAGPGDPMCDADKTLATFEKCKS----HFPNALLCLSTNGLALPEHVDEIVRLGVSH 136 Query: 230 LAISLHAPNDEIRDEIVPI----NKKYNIET----FLAAVRRYLEKSNANQGRVTIEYVM 281 + ++++A ++ ++ K Y E LA + + K V I V+ Sbjct: 137 VTVTVNAVTPDVGSKVYSWVRYEGKNYYGEEAARILLARQDKGIRKLKEAGMLVKINTVV 196 Query: 282 LDHVNDGTEHAHQLAELLKDTPCKI-N---LIPWNPFPGAPYGRSSNSRIDRFSKVLMSY 337 + VN +H ++ K I N +IP + P S I R Sbjct: 197 IPGVN--IDHVQSISAKAKQWGADIMNCMAMIPVHDTPFENLKSPSTEEIHR-------- 246 Query: 338 GFTTIVRKTRGDDIDA----------ACGQL 358 +R++ GDDID ACG+L Sbjct: 247 -----IRRSIGDDIDQMTHCSRCRADACGKL 272 >UniRef50_O27899 Nitrogenase iron-molybdenum cofactor biosynthesis protein NifB n=2 Tax=Methanobacteriaceae RepID=O27899_METTH Length = 288 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 94/264 (35%), Gaps = 32/264 (12%) Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI 170 D + V C + CKFC+ R R + I KV + PI Sbjct: 24 HDRVGRVHVPIAPRCNIHCKFCTRDINECER--RPGVTGRLMTADDAIKHVEKVKEEMPI 81 Query: 171 TNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VPALDKLGDMIDV 228 + + + G G+ L N + +ST+G+ D+L ++ Sbjct: 82 SVIGVAGPGDALAN-EETFEFFKKASKK----FPDLLKCMSTNGLLLPDRADELAELGIN 136 Query: 229 ALAISLHAPNDEIRDEI----VPINKKYNIETFLAAV----RRYLEKSNANQGRVTIEYV 280 + ++++A + EI ++I V +K Y+ + +EK V + V Sbjct: 137 TVTVTVNAVDPEIGEKIYSFVVYKDKVYHGREAFEVLSRNQLEGIEKLAERGIIVKVNSV 196 Query: 281 MLDHVNDGTEHAHQLAELLKDTPCK-INLIPWNPFPGA-PYGRSSNSRIDRFSKVLMSYG 338 ++ +ND EH +A +K +N+IP P Y R + +I+R + Sbjct: 197 LIPGLND--EHIVDIAREVKKRGASLMNIIPLIPMGEMKDYPRPTCEQIERVRNEVEK-- 252 Query: 339 FTTIVRKTRGDDIDAACGQLAGDV 362 + R AC Q D Sbjct: 253 IIPVFR---------ACTQCRADA 267 >UniRef50_B6YRJ3 Nitrogenase molybdenum-cofactor biosynthesis protein NifB n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YRJ3_AZOPC Length = 419 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 36/249 (14%) Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRN--------LRVSEIIGQVWRAAKIVGAA 162 +D A + + C ++C +C N + L Q K + Sbjct: 12 KDKYARVHLPVAPTCNVQCNYCDRRYDCCNESRPGVSSMLLSPD----QALYFLKALSEK 67 Query: 163 KVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--PALD 220 I+ + + G G+P + + + ++ + ++ + LST+G+ P +D Sbjct: 68 MPN----ISVIGIAGPGDPFASPEITMRTVRLVKKE----FPEKIMCLSTNGLDLFPYID 119 Query: 221 KLGDMIDVALAISLHAPNDEIRDEI---VPINKK-YNIET----FLAAVRRYLEKSNANQ 272 +L ++ L I++++ E ++ V NK+ Y E L R L+++ Sbjct: 120 ELVEIGLSHLTITINSVKSETLAKLYRWVRYNKRVYRGEAGGDILLEQQLRCLQRTKERC 179 Query: 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWNPFPGAPYGR---SSNSRID 328 V I V+ +ND ++A+ + D +N IP P + S + Sbjct: 180 IVVKINTVICPGINDS--EVEEIAQKVADLGADTMNCIPLYPVENTEFAFLPIPSEEAMG 237 Query: 329 RFSKVLMSY 337 V+ + Sbjct: 238 EIKSVVAQH 246 >UniRef50_D2RJC4 Pyruvate formate-lyase activating enzyme n=2 Tax=Bacteria RepID=D2RJC4_ACIFE Length = 243 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 51/261 (19%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNL-RVSEIIGQVWRAAK 157 +ET + + Q GC + C +C T + G L E++ Q A + Sbjct: 7 HSIETFGSVDGPGTRFIIFVQ-GCHMRCLYCHNVDTWKCGQGGQLKTADELLDQ---AER 62 Query: 158 IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV- 216 G + + G GEPLL + ++ G+ + T+G Sbjct: 63 YRPYWGPEGG-----ITVSG-GEPLLQMEFLLDLFR---KAKARGIGT---CIDTAGQPF 110 Query: 217 -------PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSN 269 +L ++ D+ L H + E ++ + L R + Sbjct: 111 TRKEPFFSQFQQLMEVTDILLVDVKH-IDPEAHKKLTGQ----PNDNILDLFRYL----S 161 Query: 270 ANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWN------------PFP 315 ++ + + V++ D + + L ++ ++P++ P Sbjct: 162 DSKKPIWVRQVLVPGWTDDPASLKRTRQFLDTLANIQRVEVLPYHNMGLYKWEELGIPNQ 221 Query: 316 GAPYGRSSNSRIDRFSKVLMS 336 + +D+ +L + Sbjct: 222 LKDVKPPTREEVDKARAILRA 242 >UniRef50_B8DR83 Nitrogenase cofactor biosynthesis protein NifB n=9 Tax=Bacteria RepID=B8DR83_DESVM Length = 427 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 88/234 (37%), Gaps = 24/234 (10%) Query: 115 ATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK--VTGQRPITN 172 + V C ++C +C+ + R + V + + + IT Sbjct: 23 GRVHVPVAPRCNIQCGYCNR-KYDCVNESRPG-VTSAVLSPRQALDYVDKVLAADPRITV 80 Query: 173 VVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTS--GVVPALDKLGDMIDVAL 230 + + G G+P+ N + + ++ + + LS++ G+ P LD+L ++ + Sbjct: 81 IGIAGPGDPMANPAETLETLRLVHERH----PELLFCLSSNGLGLPPHLDRLKELGVTHV 136 Query: 231 AISLHAPNDEIRDEIVPINK--------KYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 ++++A + I +++ + + E LA + V + +++ Sbjct: 137 TVTINAVDPAIGEKLYSWVRDDKVVWRGREAAELLLARQLESVRGLVERGMVVKVNTILV 196 Query: 283 DHVNDGTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPYGR---SSNSRIDRFSK 332 VND H ++A ++ + I N+IP P P + ++ K Sbjct: 197 PGVND--RHVEEVARVVGELGATIQNIIPLKPTADTPLAHLPEPDAAVVNAARK 248 >UniRef50_Q9V177 MooA-like molybdenum cofactor biosynthesis protein A related n=3 Tax=Pyrococcus RepID=Q9V177_PYRAB Length = 419 Score = 107 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 89/248 (35%), Gaps = 39/248 (15%) Query: 106 TVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT 165 + + + V GC + C FCS + ++R ++ ++ + K Sbjct: 106 AFGLIDRGTNLIQVRGSTGCNMRCIFCSVDEGPYSRTRKLDFVVD-IDYLLKWFDWVAKE 164 Query: 166 GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV---PALDKL 222 + + + GEPLL +V ++ + + + +++ ++GV+ +++L Sbjct: 165 KGKGLE-AHLDAQGEPLL-YPFIVELVQALREHPHVSV----ISMQSNGVLLNDKLVEEL 218 Query: 223 GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 + + +S+H+ + E ++ I K Y++ L + V I V++ Sbjct: 219 AEAGLDRVNLSIHSLDPEKAKMLMGI-KDYDLNHVLEMAEALV----NAGIDVLIAPVIM 273 Query: 283 DHVNDGTEHAHQLAELLKDTPC--------KINLIPW----NPF--PGAPYGRSSNSRID 328 VND + A E + N IP+ NP P+ Sbjct: 274 FGVND--DEAEAFIEFARRIGAGKRWPALGFQNYIPYKFGRNPVIAKPVPFK-------- 323 Query: 329 RFSKVLMS 336 F + L Sbjct: 324 EFYRWLRE 331 >UniRef50_A4J0I5 Pyruvate formate-lyase activating enzyme n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0I5_DESRM Length = 229 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 33/227 (14%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 E+ + CV GC L C++C T + + EI+ +V R Sbjct: 6 HSFESCGTVDGPGIR-CVVFFQGCLLRCRYCHNPDTWDLLGGQEMDSDEIVKKVRRFKSY 64 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA 218 + + G GEPLL + ++ + + TSG + Sbjct: 65 FHNNGG--------ITLSG-GEPLLQPDFAFAILQQCKKE------GIHTAVDTSGCID- 108 Query: 219 LDKLGDMIDVA--LAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 + L ++ L + + A +D + + Y+ + + Sbjct: 109 VGALEKILPFTDLLLLDVKAVDDSLYHWLTGGK-----AETFQMAVDYIRQQK---TPLW 160 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAPYG 320 + YV+L +ND E+ ++L +L+ K+ L+P++ + Sbjct: 161 LRYVVLPGMNDSPEYRYRLEKLINSLGDQVKKVELLPYHTMGVHKWK 207 >UniRef50_C2BHE9 [formate-C-acetyltransferase]-activating enzyme n=2 Tax=Anaerococcus RepID=C2BHE9_9FIRM Length = 239 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 86/246 (34%), Gaps = 46/246 (18%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 +ET+ + + GC L C FC T + R++ V EI+ + R Sbjct: 5 HSIETMGLVDGPGIRTVFFLS-GCPLRCVFCHNPDTQSLDYGRDVTVEEIVKRALRMKPY 63 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--- 215 V + G GEPL + V+ + + + V + TSGV Sbjct: 64 FKNGGG--------VTLSG-GEPLASGAFVLETIRALHKE------AIHVAVDTSGVGDE 108 Query: 216 --VPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG 273 + + D+I + + + I K Y + +++E Sbjct: 109 KYYDDIAREADLIL----LDIKHYDPYF---FYEITKNY-----QDKLIKFMESIKKTDT 156 Query: 274 RVTIEYVMLDHVNDGTEHAHQLAELLKDTPC---KINLIPWNPFP-------GAPYGRSS 323 RV I +VM+ V D E L + ++ KI ++P++ G PY + Sbjct: 157 RVWIRHVMMPFVTDTKEDMDGLVDFIRPIKANIDKIEILPYHKLGVCKYADLGKPYRIKN 216 Query: 324 NSRIDR 329 +D+ Sbjct: 217 MEAMDK 222 >UniRef50_D0MX91 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MX91_PHYIN Length = 170 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 281 MLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFP-GAPYGRSSNSRIDRFSKVLMS-YG 338 ML VND E AH L +LL++ +NLIP+N GA + S I F VL Y Sbjct: 1 MLAGVNDSIETAHTLGKLLQNRSVHVNLIPYNTTDVGAQFQSPSAEDIRAFHAVLREPYN 60 Query: 339 FTTIVRKTRGDDIDAACGQLAGDVIDRTKR 368 +R+ G DID ACGQLA R Sbjct: 61 LKATIRENHGTDIDGACGQLALKNKPDGSR 90 >UniRef50_Q58493 Uncharacterized protein MJ1093 n=16 Tax=Euryarchaeota RepID=Y1093_METJA Length = 300 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 97/275 (35%), Gaps = 34/275 (12%) Query: 110 PEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 D + + C + CKFC + R + + V + + Sbjct: 23 IHDKVGRVHLPVAPRCNIACKFCRRSLGKEACEHRPG--VALSVLKPEDVESYLNKVLKE 80 Query: 170 ITNV---VMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLGD 224 I N+ + G G+ L N ++I+ D+ L K LST+G++ KL D Sbjct: 81 IPNIKVVGIAGPGDSLFN-KETFETLKII-DEKFPNLIK---CLSTNGLLLNKYYKKLAD 135 Query: 225 MIDVALAISLHAPNDEIRDEIV-----PINKKYNIE---TFLAAVRRYLEKSNANQGRVT 276 + + ++++A + EI EIV Y IE + ++K+ + Sbjct: 136 LNVKTVTVTVNAIDPEILKEIVEWVYYDKKVHYGIEGAKILIENQIDGIKKAYDEDLIIK 195 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNP-FPGAPYGRSSNSRIDRFSKVLM 335 I V++ +N H +A+ LKD N+IP P + + + + + + Sbjct: 196 INTVLIPEIN--MNHVVDIAKELKDFVYIQNIIPLIPLYKMSHLRPPTCEELKKVREECE 253 Query: 336 SYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTL 370 Y ACGQ D + K Sbjct: 254 KY-IPQFR----------ACGQCRADAVGLIKERK 277 >UniRef50_C0QGR9 PflC1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QGR9_DESAH Length = 302 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 81/271 (29%), Gaps = 53/271 (19%) Query: 108 YIPEDDRATLCVSSQVGCALE----------------CKFCSTAQQGFNRNLRVSEIIGQ 151 + D + C C C C N E++G+ Sbjct: 48 IVRYDKKCIGCGKCVKACPQGALEISSSDSIVLDAKKCIACGKCVDVCCAN--AIEMVGK 105 Query: 152 VWRAAKIVGAAKVT---GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRV 208 + ++ V G GEPL V +++ + Sbjct: 106 TFSPREVADITLKDVAFYDESGGGVTFSG-GEPLFQWQFVRECSKLLRKRGV------HI 158 Query: 209 TLSTSGVVPA--LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLE 266 + TSG V + ++ +D+ L H I P+ + ++ LE Sbjct: 159 AMETSGCVKEDIIKEIAPHVDLFLYDLKH---------IDPVEHRKYCGIRNESILDNLE 209 Query: 267 KSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPG-------- 316 + + I V++ VND +L E LK I+L+P + Sbjct: 210 LLSRMGKEIIIRMVVIPGVNDSPGTVERLCEFLKGIIGIRYISLLPLHKSATEKYNRLDK 269 Query: 317 ----APYGRSSNSRIDRFSKVLMSYGFTTIV 343 + + ++ + +++ S GFT + Sbjct: 270 EFLLSDFEVPNDEEVKAIAEIFQSKGFTVQI 300 >UniRef50_B8D1A9 Pyruvate formate-lyase activating enzyme n=12 Tax=Bacteria RepID=B8D1A9_HALOH Length = 247 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 90/261 (34%), Gaps = 43/261 (16%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 VE++ + + V +Q GC L C++C T + + + E++ +V + Sbjct: 7 HSVESMGVHDGPGIRYVVFTQ-GCPLRCQYCHNPDTWMRKAGKRVEAGELLLRVLKCKPY 65 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV-- 216 + ++ V + G GEP L V ++ + L TSG V Sbjct: 66 MDSSGGG-------VTISG-GEPTLQPGFVRELLKACKEQ------GIHTALDTSGYVTP 111 Query: 217 PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 + ID+ L + + +E ++ ++ + + Sbjct: 112 EVFSSILPYIDLVL-LDIKHIKEEKHRDLTGVSN--------ERTLELISLLEKEKQPYW 162 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPYG------------RS 322 I +V++ + D + +QLA L + ++ L+P++ + Sbjct: 163 IRHVIVPGITDNRDDLNQLASYLSNLNGLERVELLPYHRLGVYKWQELGYEYRLEGIEPP 222 Query: 323 SNSRIDRFSKVLMSYGFTTIV 343 S ++ + + G + + Sbjct: 223 SRGQMQEIKGLFIKKGVSASI 243 >UniRef50_C3WY92 Fe-S oxidoreductase n=12 Tax=Fusobacterium RepID=C3WY92_9FUSO Length = 287 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 96/237 (40%), Gaps = 33/237 (13%) Query: 125 CALECKFCSTA-----QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 C L C FC Q R ++EI+ ++ K + V G G Sbjct: 28 CNLNCIFCECGATKKIQLKRQRFKDMNEILNEIQSVLKDI---------KPDYVTFSGSG 78 Query: 180 EPLLNLN--NVVPAMEIMLDDFGFGLSKRRVTLSTSGVV---PALDKLGDMIDVALAISL 234 EP L+L+ N+ A++ L G ++ L T+ ++ + K + ID+ + +L Sbjct: 79 EPTLSLDLGNISKAIKKDLKFKG------KICLITNSLLLADKQVIKELEYIDL-IIPTL 131 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 + +I ++IV + + +++ ++ +G++ IE +L+++ND E+ + Sbjct: 132 NTLRQDIFEKIVRPDYRTSVDEIRKGFINL--NNSNYKGKIWIEIFILENINDNEENFIE 189 Query: 295 LAELLKDTPCKINLIPWNPFP----GAPYGRSSNSRIDRFSKVLMSYGF-TTIVRKT 346 +A L + + I N S +I + K+L G + K+ Sbjct: 190 IANFLNSENIRYDRIQLNTIDRVGAERDLKAISFDKILKAKKILEENGLHDVEIIKS 246 >UniRef50_C5TMX1 Pyruvate formate-lyase 1-activating enzyme n=4 Tax=Neisseria RepID=C5TMX1_NEIFL Length = 289 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 80/263 (30%), Gaps = 45/263 (17%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQG-----FNRNLRVSEIIGQVWRAA 156 +E+ + + Q GC + C +C + L V+ ++ QV Sbjct: 49 HSIESCGAVDGPGLRYVLFLQ-GCLMRCLYCHNRDTWDLHTEQAQELDVATVMKQVMTYR 107 Query: 157 KIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV 216 + A EPLL V + L ++G Sbjct: 108 HYLRATGGGVTATGG--------EPLLQYEFVRDWFTACREHD------IHTCLDSNGYA 153 Query: 217 PALDKLGDMIDVA---LAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQG 273 D + D + + + L + EI +V I ++ RYL + N Sbjct: 154 LHYDSILDDLLDHTNLVMLDLKQIDPEIHKVLVGIPNTKTLK-----FARYLAERNQPMR 208 Query: 274 RVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPY------------ 319 + YV++ D AH L E + D + L+P++ + Sbjct: 209 ---VRYVVVPGYTDDERSAHLLGEFIGDMDNVEMVELLPYHELGAHKWALCGDEYKLKGV 265 Query: 320 GRSSNSRIDRFSKVLMSYGFTTI 342 I + ++L SYG I Sbjct: 266 HPPPKETILKIKEILESYGKNII 288 >UniRef50_B9X299 NifB protein n=4 Tax=Paenibacillus RepID=B9X299_9BACL Length = 458 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 111/298 (37%), Gaps = 38/298 (12%) Query: 107 VYIPEDDRATLCVSSQVG--CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV 164 Y E R + V C ++C +C+ + R ++ +V + K Sbjct: 22 CYSEEAHRFFARMHIPVAPACNIQCNYCNR-KFDCVNESRPG-VVSEVLTPEQAERKVKG 79 Query: 165 TGQR--PITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--PALD 220 + ++ V + G G+PL N + + + LST+G+ +D Sbjct: 80 VAAQLMQLSVVGIAGPGDPLANADKTFDTFARVKK----HVPDVMTCLSTNGLTLYRHID 135 Query: 221 KLGDMIDVALAISLHAPNDEIRDEIVPI----NKKYNIET----FLAAVRRYLEKSNANQ 272 ++ ++ + I+++A + ++ EI P +Y ++ + +E+ Sbjct: 136 RIVELGIGHVTITINAIDPDVGKEIYPWVFDEGVRYEGREAAALLISRQLQEVEELAKRG 195 Query: 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPY-----GRSSNSR 326 V + +M+ VND +H ++++ +K+ + N+ P PG+ Y Sbjct: 196 ILVKVNSIMIPGVND--KHLVEVSKKVKELGATLHNVTPLIIAPGSQYEKDGRKAPRPKE 253 Query: 327 IDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV 384 +++ + L G ++R C Q D + + + Q E ++ V Sbjct: 254 LNQLQEQLSEGGTK-LMRH---------CRQCRADAVGLLGQDRNQDFQLETMEADPV 301 >UniRef50_A5G750 Radical SAM domain protein n=8 Tax=cellular organisms RepID=A5G750_GEOUR Length = 313 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 27/229 (11%) Query: 120 SSQVGCALECKFCSTAQQ-----GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 + C C +C + EI +V ++ I + Sbjct: 21 ITPKVCTYSCVYCQVGRTIKTQVDRRAFYWPEEIAAEVENKVRVAREN----GEQIDYLT 76 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV----PALDKLGDMIDVAL 230 + GEP L++ N+ +E++ G R+ + T+ + + L V+L Sbjct: 77 FVADGEPTLDI-NLAREIELLR-PLGI-----RIAVITNASLIWRSDVAEALRKANWVSL 129 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 + +++ ++ N+ + F+ + + + G + E +++ +ND E Sbjct: 130 --KVDTVREDVWRKL---NRPSPLLEFMDLLTGMIGFAKRYGGELATETMLVKGLNDAEE 184 Query: 291 HAHQLAELLKDT-PCKINL-IPWNPFPGAPYGRSSNSRIDRFSKVLMSY 337 H LA+ L P K L IP P S ++R ++L Sbjct: 185 HLELLADFLMALKPAKAYLAIPTRPPAELWVKPPSEETVNRAFQILRRK 233 >UniRef50_Q46267 Pyruvate formate-lyase-activating enzyme n=26 Tax=Clostridiales RepID=PFLA_CLOPA Length = 238 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 30/225 (13%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 +E++ + + V Q GC L C +C T + L E++ ++ R Sbjct: 7 HSIESMGLVDGPGIRTVVFFQ-GCGLRCSYCHNPDTWNMAGGKELTAEELLKKLLRFKPY 65 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV-VP 217 + V G GE LL ++ +++ + + T+G Sbjct: 66 FDRSGGG-------VTFSG-GEVLLQPEFLIDILKLCKEQ------GIHTAIDTAGYGYG 111 Query: 218 ALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTI 277 +++ D+ L + + +D+ I K+ +L+ +V I Sbjct: 112 NYEEILKHTDLVL-LDIKHVDDDGYKCITGKGKR--------GFDDFLKAVENIGVKVWI 162 Query: 278 EYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPYG 320 +V++ + D E+ +LA ++K+ K+ L+P++ Y Sbjct: 163 RHVIVPTLTDSKENIRKLANIIKNIRNVEKVELLPYHTLGINKYE 207 >UniRef50_Q8TXS8 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyrus kandleri RepID=Q8TXS8_METKA Length = 282 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 100/282 (35%), Gaps = 58/282 (20%) Query: 111 EDDRATLCVSSQVG--CALECKFCSTAQ----------QGFNRNLRVSEIIGQVWRAAKI 158 + + V VG C + C+FC + R + E + R + Sbjct: 14 GEHGKFVKVHLPVGGRCNIHCRFCESGLEHEGVRVDYPGRAVRTITGDEARTALKRVKEH 73 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--V 216 G + V + G G+PL N +V +++ + + + + LST+GV Sbjct: 74 CG--------RVDVVGIAGPGDPLANWEDVKETFDVVAE----TVPEAKRCLSTNGVWLP 121 Query: 217 PALDKLGDMIDVALAISLHAPNDEIRDEIVPI-------------NKKYNIETFLAAVRR 263 +D++ +++ ++ I+++A + EI +I ++ I Sbjct: 122 DLIDEVTELVH-SVTITVNALDPEIAADIYDRALTPEGEVLTGKEAARW-IVERQEGAMD 179 Query: 264 YLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK-INLIPWNPFPGA-PYGR 321 L+K +V V++ VN + ++AE D +N+IP P + Sbjct: 180 ALKKERYILKKVNF--VLVPGVN--EDEVERVAERAADAGFHAMNVIPLIPGGDMKDHRP 235 Query: 322 SSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVI 363 + + R Y T + R C Q DVI Sbjct: 236 PTCRELSRARDRAEKY-ITVMRR----------CMQCRADVI 266 >UniRef50_Q97JT3 Predicted Fe-S-cluster redox enzyme, YLON B.subtilis homolog n=2 Tax=Bacteria RepID=Q97JT3_CLOAB Length = 337 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 83/256 (32%), Gaps = 34/256 (13%) Query: 110 PEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRP 169 P + + +S+Q GC CKFC + G N+ +++ Q+ +A + ++ Sbjct: 63 PLTKKWVVTMSTQYGCDSGCKFCDVPKVGKGVNVTYNDLKTQLEQALNL--HPEIDRTER 120 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRV-TLSTSGVVPALDKLGDM--- 225 + N+ MGEP N + V+ + + + + + + T+ L Sbjct: 121 L-NIHYARMGEPSWNND-VLDFTRNLKNIVKPYIGESLIHPVFTTMCPNKNKFLAHRINE 178 Query: 226 ----------IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRV 275 D L +S+++ N+ R + + + + Sbjct: 179 WVDIKNNLFQGDAGLQLSINSTNENQRRD-MFRGNALTLNEISSIGNDLPMPKGRK---- 233 Query: 276 TIEYVMLDHVNDGTE-HAHQLAELLKDTPCKINLIPWNPFP---GAPYGRS----SNSRI 327 Y + + D E A L +L + + + P + + S + Sbjct: 234 ---YCLNFALADEYEVDAKVLKKLFDPSKFMVKITPLHKTVSSIENDIKTTKGYVSYTPY 290 Query: 328 DRFSKVLMSYGFTTIV 343 L GF +V Sbjct: 291 KDIENDLKKMGFDVLV 306 >UniRef50_C5A4P1 Radical SAM protein, elongator protein 3/MiaB/NifB related n=6 Tax=Thermococcus RepID=C5A4P1_THEGJ Length = 419 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 89/247 (36%), Gaps = 37/247 (14%) Query: 106 TVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT 165 + + + + GC L C FCS + ++R ++ ++ + A++ Sbjct: 106 AFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIK 165 Query: 166 GQRPITNVVMMGMGEPLLNLNNVVPAMEIML-DDFGFGLS-KRRVTLSTSGVVPALDKLG 223 G+ ++ G GEPL+ V ++ + +S + TL T +V ++L Sbjct: 166 GKGLEAHLD--GQGEPLI-YPFRVELVQALREHPNVSVISMQSNGTLLTDKLV---EELA 219 Query: 224 DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLD 283 + + +S+H+ + E ++ + K Y+++ L + V I V++ Sbjct: 220 EAGLDRVNLSIHSLDPEKAKMLMGM-KSYDLDHVLEMAEALV----NAGIDVLIAPVIIF 274 Query: 284 HVNDGTEHAHQLAELLKDTPC--------KINLIPW----NPF--PGAPYGRSSNSRIDR 329 +ND + A E + N +P+ NP P+ Sbjct: 275 GIND--DEAEAFIEFARKIGAGKRWPALGFQNYVPYKFGRNPVIAKPVPFK--------E 324 Query: 330 FSKVLMS 336 F L Sbjct: 325 FYAWLRR 331 >UniRef50_O67929 Molybdenum cofactor biosynthesis protein A n=2 Tax=Aquificaceae RepID=MOAA_AQUAE Length = 320 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 21/205 (10%) Query: 116 TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVM 175 L +S C L C FC G N Q+ +I K+ + + V + Sbjct: 12 VLRISLTDRCNLRCNFCMPP--GKEYNFLPK---RQLLTPEEIEEYVKIFAKLGVEKVRL 66 Query: 176 MGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLGDMIDVALAIS 233 G GEPLL + + ++ + G + + L+T+GV L L + + +S Sbjct: 67 TG-GEPLLRED-LEEIIQRISKVEGI----KDIALTTNGVFLKERLKALKEAGLKRITVS 120 Query: 234 LHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 +H+ N E ++V N+ N+ + ++ +V + V++ ND + Sbjct: 121 VHSLNPEKNQKLV--NRSVNLGEVFEVII----RAKELGFKVKVNSVIIKGFND--DEIL 172 Query: 294 QLAELLKDTPCKINLIPWNPFPGAP 318 LA K+ + I + Sbjct: 173 DLARFFKNLGVTLRFIEYMDVGTVN 197 >UniRef50_UPI0001692E51 hypothetical protein Plarl_06640 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E51 Length = 247 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 88/260 (33%), Gaps = 42/260 (16%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 +ET + + Q GCAL+C+FC T G + + V EI+ ++ Sbjct: 6 HSIETFGTVDGPGIRFVLFLQ-GCALQCQFCHNADTWDTGGGKVMEVEEILAEIESYLPY 64 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--V 216 ++ + + G GEP L + V + F TL +SG + Sbjct: 65 YRSSNGG-------ITVTG-GEPTLQAHFVAELFKACKSRFQL-----HTTLDSSGFCEI 111 Query: 217 PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT 276 + L D+ D+ L + L + E + + + + + + ++ Sbjct: 112 DNVQDLMDVTDLVL-LDLKIIDREKHIRLT--------SQPNDRILKTAKWLSDHDKKMW 162 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPY------------GRS 322 I +V++ V D E +L E + K ++P++ + Sbjct: 163 IRHVLIPGVTDAEEDLRKLGEFMGTLKGIEKFEILPYHQMGVYKWEMLGREYPLKGVESP 222 Query: 323 SNSRIDRFSKVLMSYGFTTI 342 + + R ++ + Sbjct: 223 TEEEVQRAYAIVNEARESVT 242 >UniRef50_B9EA79 Formate acetyltransferase activating enzyme n=90 Tax=Firmicutes RepID=B9EA79_MACCJ Length = 251 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 84/263 (31%), Gaps = 50/263 (19%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGF----NRNLRVSEIIGQVWRAAK 157 +E++ + + +Q GC L C+FC +R + E++ ++ Sbjct: 7 HSIESLGTVDGPGLRYILFTQ-GCLLRCQFCHNPDTWEIGTPSREVTAEEMVEEIVPYIP 65 Query: 158 IVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTS-GVV 216 A+ V + G GEPLL L + + ++ + TS G Sbjct: 66 YFNASGGG-------VTISG-GEPLLQLPFIEQLFRRLKEE------GIHTCIDTSAGCF 111 Query: 217 PALDKLG-------DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSN 269 + D+ L + + ++E + + + ++ + Sbjct: 112 NETPAFMKHFNPVQENTDLFL-LDIKHIDNEKHLSLTGKPNTH--------ILKFARMLS 162 Query: 270 ANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPY-------- 319 + V I +V++ + D E +L + + K ++P++ + Sbjct: 163 DRKQPVWIRHVLVPGITDDKEDLIKLGQFINSLENVEKFEILPYHQLGVHKWEALGIKYP 222 Query: 320 ----GRSSNSRIDRFSKVLMSYG 338 S+ + + + G Sbjct: 223 LEGVEAPSDETVRQAYDYVDFKG 245 >UniRef50_UPI0001BC586B Fe-S oxidoreductase n=3 Tax=Fusobacterium RepID=UPI0001BC586B Length = 275 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 78/230 (33%), Gaps = 24/230 (10%) Query: 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPI--TNVVMM 176 + C L C FC I Q + + + V Sbjct: 22 IVVPKTCNLNCVFCECGPTK------DWTIERQHFISYDEFIQELEEALTDVVPDYVTFS 75 Query: 177 GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMID--VALAISL 234 G GEP L+L+ + + + + ++ + T+ ++ + + + I + SL Sbjct: 76 GSGEPTLSLD-LGKIIRYIKKEH----PSIKIAVITNSLLLHREDVLEEIQEADLIMPSL 130 Query: 235 HAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQ 294 H EI ++IV + Y IET L +++ +G + +E +++ +N Sbjct: 131 HTVRQEIFEKIVRVYPNYRIETVLEGLQKLCSC---FRGNIDLELFLIEGLNTSFSDLKA 187 Query: 295 LAELLKDTPCKINLIPWN----PFPGAPYGRSSNSRIDRFSKVLMSYGFT 340 A +K + + N P + ++ + L G + Sbjct: 188 YATFVKTLSYRK--LQLNSLDRPGTESWVKPVPYHKLLEIKEYLEQEGLS 235 >UniRef50_C9RPI8 Pyruvate formate-lyase activating enzyme n=3 Tax=Bacteria RepID=C9RPI8_FIBSS Length = 258 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 89/270 (32%), Gaps = 53/270 (19%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVS-------EIIGQVWR 154 ++ET + V +Q GC + CKFC + + EI + Sbjct: 7 NKLETFGSVDGPGIRFVVFTQ-GCPMRCKFCHNPETWDFGTKSANGTANGSFEISAEDLL 65 Query: 155 --AAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLST 212 A + G + + G GEPL ++ ++ E + T Sbjct: 66 KKALRYKPYWGTDGG-----ITVSG-GEPLAQIDFMIEFFEAAKSAGV------HTCVDT 113 Query: 213 SGVV--------PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRY 264 GV +++L D+ L H + + E+ + + Sbjct: 114 CGVTFRPTGEPFAKIERLMKSTDLLLVDIKH-IDADAHKELTGHGN--------ENIIEF 164 Query: 265 LEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPYG-- 320 + Q + I +V++ ++D E + + ++ ++ ++P++ F + Y Sbjct: 165 FRYLDRIQKPIWIRHVLVPGISDNDEALTRTRDFIRTLHNVKRVEVLPYHAFALSKYKEL 224 Query: 321 ----------RSSNSRIDRFSKVLMSYGFT 340 + R+ +++L + +T Sbjct: 225 KIDYALKDTQSPTAERVANANEILETAKYT 254 >UniRef50_C1SID9 Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SID9_9BACT Length = 446 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 96/275 (34%), Gaps = 35/275 (12%) Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV--TGQR 168 D A + + C ++C +C+ + + R + V + + + Sbjct: 21 HDKYARIHLPVAPACNIQCNYCNR-KYDCSNESRPG-VTSGVLNPEQALEKVIMIEQSLE 78 Query: 169 PITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VPALDKLGDMI 226 ++ V + G G+ L N + ++ + +ST+G+ +D++ ++ Sbjct: 79 NLSVVGIAGPGDALANPTATFQTLRLLKAYKAELIP----CISTNGLNLPDYIDEIEELG 134 Query: 227 DVALAISLHAPNDEIRDEIVPINKK----YNIET----FLAAVRRYLEKSNANQGRVTIE 278 + ++++A + E+ I Y+ L + +E V I Sbjct: 135 ISHVTVTMNAVDPEVGQHIYSWIHHEGVTYHGVEAAAKLLERQLQGVEMLVERGILVKIN 194 Query: 279 YVMLDHVNDGTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPYGRSSNSRIDRFSKVLMSY 337 V++ +ND H ++A+ +K+ I N++P P + + + K++ Sbjct: 195 TVLIPGINDS--HITEVAKKIKELGVFIHNILPLMSKPEYGTKFAKDGVPEPDIKMIAKA 252 Query: 338 GFTTIVRKTRGDDIDAA-------CGQLAGDVIDR 365 F +I C Q D I + Sbjct: 253 RFDC-------AEIMGGFDNVMQHCRQCRADAIGK 280 >UniRef50_C8S672 Radical SAM domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S672_FERPL Length = 382 Score = 98.5 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 86/238 (36%), Gaps = 21/238 (8%) Query: 106 TVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT 165 I + L V GC L C FCS + ++ + I+ + ++ + Sbjct: 74 AFGIIDRGTNLLQVRPITGCNLNCIFCSVDEGRSSKTKKTDFIVDPDYLLEELRKICEFK 133 Query: 166 GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKLG 223 G+ ++ G EP+L + +E + + + V++ T+G + + + Sbjct: 134 GRGVEVHID--GQAEPML-YPYMKQFLEGVAEIKEVSV----VSMQTNGTLISEKVVEEF 186 Query: 224 DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLD 283 + I +S+ A + E+ ++I KY ++ L AV E ++ + I V L Sbjct: 187 EGILDRFNVSISALDQELANKIY--GTKYPLKKVLEAV----EAIANSKIDLLIAPVWLP 240 Query: 284 HVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSR----IDRFSKVLMSY 337 +ND E ++ E + P PY + F + L Sbjct: 241 GIND--EEIPKIIEFALEIGAGKKCPPLGIQKYIPYKGGRKLKNVMSFREFYERLRKM 296 >UniRef50_Q3A2R0 Nitrogen fixation protein, MoaA/NifB/PqqE family n=3 Tax=Desulfuromonadales RepID=Q3A2R0_PELCD Length = 297 Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 90/270 (33%), Gaps = 35/270 (12%) Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK-----VT 165 + A + + GC + C FC N N R + +V ++ + K Sbjct: 23 HQNNARIHLPVAPGCNISCGFCERRFDCANEN-RPG-VTSRVLSPSQALHRVKALLAHPD 80 Query: 166 GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLG 223 + V + G G+PL N + ++ + ++ LST+G+V L+ L Sbjct: 81 VGSKLKVVGIAGPGDPLAN-EKTFETLRLVKE----AYPDLQLCLSTNGLVLPQRLETLL 135 Query: 224 DMIDVALAISLHAPNDEIRDE---IVPINKKY-----NIETFLAAVRRYLEKSNANQGRV 275 ++ ++ ++++A E + V +N + A ++ + V Sbjct: 136 EIGVGSITVTMNAITPETGAKVYQWVNVNGTVMRGQKGASALIDAQMAGIQAAARAGMLV 195 Query: 276 TIEYVMLDHVNDGTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPYGRSSNSRIDRFSKVL 334 + V + VND LA++ K I N++P + + L Sbjct: 196 KVNNVYIPGVNDHET--LPLAKIAKKLGASIMNILPLIAQGAFRDNPVPSDAQMAVVRDL 253 Query: 335 MSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 ++R C Q D Sbjct: 254 AEKILP----QSR------HCKQCRADAAG 273 >UniRef50_A5N1T7 NifK/nifB n=3 Tax=Clostridium RepID=A5N1T7_CLOK5 Length = 890 Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 89/227 (39%), Gaps = 24/227 (10%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQ--RPITNVVMMGMGEPL 182 C + C +CS + R + V + + K+ +T + + G G+ L Sbjct: 497 CNISCNYCSR-KYDCANESRPG-VTSGVLTPEEALEKFKLVKGKIENLTVIGIAGPGDAL 554 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALD--KLGDMIDVALAISLHAPNDE 240 N V ++E++ + K LST+G++ +L ++ + ++++A +++ Sbjct: 555 ANFPKVKKSLELIRKED----PKITFCLSTNGLMLPFYANQLIELGVSHVTVTINAVDEK 610 Query: 241 IRDEIVP----INKKYNIET----FLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 I I + KY E L LE + + VML +ND H Sbjct: 611 IGALIYKEVNYLEHKYKGEEGARILLNNQLSGLEYLCSKGVVCKVNIVMLKGINDS--HI 668 Query: 293 HQLAELLKDTPCKI-NLIPWNPFPGAPYGR---SSNSRIDRFSKVLM 335 ++ + +KD + N++ P G+ + SN+ ++ K Sbjct: 669 KEVVKKVKDCGAYMTNIMQMIPVQGSGFEHLPLVSNAELNEMRKKCE 715 >UniRef50_D2REE1 Radical SAM domain protein n=2 Tax=Euryarchaeota RepID=D2REE1_ARCPR Length = 382 Score = 97.4 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 84/238 (35%), Gaps = 22/238 (9%) Query: 106 TVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT 165 + + + V GC C FCS + F++ V I+ + + A+ Sbjct: 74 AFGLIDRGTNLIQVRPITGCNFNCIFCSVDEGRFSKTRLVDYIVDPDYLLEEFRKVAEFK 133 Query: 166 GQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLG 223 G+ ++ G GEP L +V + + + + V++ T+GV+ + Sbjct: 134 GKGVEAHID--GQGEPTL-YPYLVDFVRGLKEVREVEI----VSMQTNGVLLSEKIVDDL 186 Query: 224 DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLD 283 + + +S+ A ++ +++ + +Y ++ L ++ Y+ S + I V L Sbjct: 187 EGYMDRINLSISALTQDVANKLYGV--RYPLKMVL-SIAEYIANSKIDLH---IAPVWLP 240 Query: 284 HVNDGTEHAHQLAELLKDTPCKINLIPWNP---FPGAPYGRSSNSRI--DRFSKVLMS 336 ND + ++ E + P P + + F L Sbjct: 241 GYND--DEIPKIIEWALEIGAGKRFPPLGIQKYIPHRHGRKPKVKVMTFKEFYDKLRE 296 >UniRef50_C0BY63 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BY63_9CLOT Length = 226 Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 72/203 (35%), Gaps = 36/203 (17%) Query: 118 CVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 V GC L C +C T + E+ G++ R + V Sbjct: 11 YVVFMQGCPLRCAYCHNPDTWKFEAGEEFSPQEVAGKIRRYRPYLTN---------GGVT 61 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI----DVAL 230 + G GEPL+ I+ ++ L TSG+ +L + + D+ L Sbjct: 62 VTG-GEPLMQPEFTAELFRILKEE------GFHTALDTSGI--GNLQLAERVLAYTDLVL 112 Query: 231 AISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTE 290 A +E R +Y F +L+ + + I V++ +ND E Sbjct: 113 ADVKFLTEEEYR--------RYCRADFREVT-AFLDLTKKLGIPLWIRRVLVPGINDTEE 163 Query: 291 HAHQLAELLKDTPC--KINLIPW 311 H +L + L P KI L+P+ Sbjct: 164 HIKKLVDFLTKYPNVEKIELLPF 186 >UniRef50_Q72WT2 Nitrogenase cofactor biosynthesis protein NifB n=3 Tax=Desulfovibrio vulgaris RepID=Q72WT2_DESVH Length = 514 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 29/242 (11%) Query: 125 CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAK--VTGQRPITNVVMMGMGEPL 182 C + C +C+ + R + V A+ + + I + G G+P+ Sbjct: 32 CNVLCGYCNR-KYDCVNESRPG-VTSGVLTPAQAADYLDRVLEREPAIRVAGIAGPGDPM 89 Query: 183 LNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV--VPALDKLGDMIDVALAISLHAPNDE 240 N + + ++ L LS++G+ P LD L ++++A + + Sbjct: 90 ANAAATLETLRLIRQRHPDML----FCLSSNGLGMPPHLDALAANGVTHATLTINAVDPD 145 Query: 241 IRDEIVP-------INKKYNIETFLAAVRRYLEKSN--ANQGRVTIEYVMLDHVNDGTEH 291 I + + + + R+ + V + +++ +NDG H Sbjct: 146 ISARLYTWVRDGKVVWRGRPAAELM-LERQLTALTGLVQRGIVVKVNTILVPGINDG--H 202 Query: 292 AHQLAELLKDTPCK-INLIPWNPFPGAPYGR---SSNSRIDRFSKVLMSYGFT--TIVRK 345 Q+AE + +N+IP +P P + S + ++ L T R+ Sbjct: 203 VEQVAEKVAALGATLMNIIPLHPTHDTPLAQVAEPSPEAVGE-ARRLAGAHIRQMTHCRR 261 Query: 346 TR 347 R Sbjct: 262 CR 263 >UniRef50_C0GRP4 Radical SAM domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRP4_9DELT Length = 311 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 78/215 (36%), Gaps = 15/215 (6%) Query: 125 CALECKFCSTA---QQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP 181 C+ +C +C + Q+ R E A++ ++ + G GEP Sbjct: 28 CSFDCLYCESGPTTQKTIVRR----EYADSGIILAELEKWLNDNQGDKPDHITLGGEGEP 83 Query: 182 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEI 241 LNL + + + + +T S+ P + K DV L + + + Sbjct: 84 CLNLQ-LGKIIRDIKKIE-PDIPLAVLTNSSLLGDPQVRKELRNADVVLP----SLDTLV 137 Query: 242 RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKD 301 ++E + +N+ R GRV +E +++ +ND E+ ++ LK+ Sbjct: 138 QEEFIRLNRPCAGLDIQEIARGLEAFCKEFSGRVLLEILLVPGINDSRENMEKITVFLKN 197 Query: 302 TPC-KINLIPW-NPFPGAPYGRSSNSRIDRFSKVL 334 +++L P + + R+ K L Sbjct: 198 LDHERVDLSVMSRPGAHMQLKTPDHETLHRWQKAL 232 >UniRef50_A0LJ51 Radical SAM domain protein n=4 Tax=Deltaproteobacteria RepID=A0LJ51_SYNFM Length = 443 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 18/204 (8%) Query: 113 DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN 172 +R + + C C C + Q + I V +I G A ++ Sbjct: 185 ERWEAPLPTSPVCNARCLGCISLQDRKDLRATQDRITF-VPTPEEICGVAVPHLEQAPRP 243 Query: 173 VVMMGMG---EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG-VVPALDKLGDMIDV 228 VV G G EPLL + + A+ +M + + L+T+G + + +L Sbjct: 244 VVSFGQGCEGEPLLQADTLAEAIRMMRA----ATPRGTINLNTNGSLPHMIPELCAAGLD 299 Query: 229 ALAISLHAPNDEI-RDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVND 287 ++ ISL++ P ++ VR+ + + + V+I Y +L +D Sbjct: 300 SIRISLNSARPAYYHAYFNPQGYRF------DDVRQSILAAKSAGRFVSINYFILPGFSD 353 Query: 288 GTEHAHQLAELLKDTPCKINLIPW 311 + L L+++T +I+LI Sbjct: 354 QPDELDALCRLIEET--RIDLIQM 375 >UniRef50_B5YH11 Nitrogen fixation protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YH11_THEYD Length = 293 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 93/265 (35%), Gaps = 33/265 (12%) Query: 111 EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQR-P 169 + L + C + C +C+ R + ++ + + V +R Sbjct: 22 HERYGRLHLPVAPVCNISCNYCNRNYD-CVNESRPG-VSSRIITPLEALKRVLVATERDR 79 Query: 170 ITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKLGDMID 227 I+ + + G G+PL N + +++ + + LST+G + ++ L D+ Sbjct: 80 ISVIGVAGPGDPLAN-ESTFNFFKLVRKE----FPNIFLCLSTNGLLLPKKVEVLQDLGI 134 Query: 228 VALAISLHAPNDEIRDEIVP--------INKKYNIETFLAAVRRYLEKSNANQGRVTIEY 279 + ++++A N ++I + + E L LE V + Sbjct: 135 FTVTVTINAINPSTAEKIYAWILYDGKLMKGREASEYLLENQWNGLEMLTDRGFCVKVNS 194 Query: 280 VMLDHVNDGTEHAHQLAELLKDTPCKI-NLIPWNP-FPGAPYGRSSNSRIDRFSKVLMSY 337 V++ VN +AE + K+ N+IP P + S ++ KV + Sbjct: 195 VLIPGVN--EREIENIAERARRLKAKVMNIIPLIPNGKMINLQKPSCQVLEDIRKVCEKH 252 Query: 338 GFTTIVRKTRGDDIDAACGQLAGDV 362 +R+ R C Q D Sbjct: 253 -----IRQIR------HCRQCRADA 266 >UniRef50_C5CI47 Radical SAM domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI47_KOSOT Length = 319 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 86/245 (35%), Gaps = 30/245 (12%) Query: 110 PEDDRATLCVSSQVGCALECKFCSTAQQGFNRN-----LRVSEIIGQVWRAAKIVGAAKV 164 + C C +C + N +EI+G++ K+ + Sbjct: 22 RLGRSLGVSTVPFKVCNYSCVYCQLGRTTKVCNTRQSFYPTNEILGELEEFLKVHNENEY 81 Query: 165 TGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKL 222 + ++ GEPLL ++I++ LSK+ V + T+G + Sbjct: 82 DV------ITLVSEGEPLL-----YRPIDIIIS-GIKRLSKKPVVVITNGSLFYDENVRN 129 Query: 223 GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 + +L A +DE I N+ + +F + LE N G V +E +++ Sbjct: 130 EVRQADIIMPTLDAWDDESFKRI---NRPFGKLSFEEVYKGLLELRNLFPGEVWLEVMLV 186 Query: 283 DHVNDGTEHAHQLAE---LLKDTPCKINLIPWNPFPGAPYGRSSNSRIDR----FSKVLM 335 +ND E +L E LK +N+ P P + I + F+ + + Sbjct: 187 KGLNDSKEQLERLTERIARLKPDRVYVNV-PLRPPAEPWVEKPDEVTIKQARELFNAISI 245 Query: 336 SYGFT 340 G Sbjct: 246 EKGAP 250 >UniRef50_A8AAC8 Radical SAM domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAC8_IGNH4 Length = 352 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 83/237 (35%), Gaps = 32/237 (13%) Query: 108 YIPEDDRA---TLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKV 164 I + TL VS C C FC + G E A+ Sbjct: 1 MIRDAYGRSLATLRVSVTERCNFNCIFCHSEGAGRG---SFDE-----LSVNDYDMIAEA 52 Query: 165 TGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKL 222 T + + V G GEPLL + EI+ G + ++++T+G + + L Sbjct: 53 TSRLGLKYVKFTG-GEPLLRSD----LEEIIHSFKEHGFEE--ISITTNGFLLPERTEGL 105 Query: 223 GDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 + + +SLH+ R ++ L V +EK+ N V + V+L Sbjct: 106 KEAGVSWINVSLHSL---KRQRF----RRITGVDALNRVLNGIEKALENGIEVRVNVVVL 158 Query: 283 DHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPY---GRSSNSRIDRFSKVLMS 336 +N + ++ + +++I +P + R S I+R K L Sbjct: 159 RGIN--EDEVEEIVKYAIGKGASVHVIELHPVGNGAHIFRERHSREPIERLKKWLEE 213 >UniRef50_B3EE07 Radical SAM domain protein n=10 Tax=Chlorobiaceae RepID=B3EE07_CHLL2 Length = 321 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 89/237 (37%), Gaps = 30/237 (12%) Query: 110 PEDDRATLCVSSQVGCALECKFCSTAQQG-----FNRNLRVSEIIGQVWRAAKIVGAAKV 164 + + C C +C + EI+ ++ + Sbjct: 23 RLGQSLGVDLLPMKSCTWNCVYCQIGRTKHYVTERCEFYPPEEILKEI--------RDAL 74 Query: 165 TGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG---VVPALDK 221 I + +G GE LL ++ +E + ++ V + T+G + + + Sbjct: 75 QAGTHIDWITFVGSGETLL-YKDIGYLIEEVKK-----MTAIPVAVITNGSLFHLEEVRR 128 Query: 222 LGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVM 281 D L SL+A ++E+ + I + + L + ++ + +G++ +E ++ Sbjct: 129 ELLHADAVL-PSLNAGSEELYERIDRPASGFTFKQHLDGLIQFRQ---EYKGKLWVEVML 184 Query: 282 LDHVNDGTEHAHQLA---ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLM 335 L+ +ND E ++LA +L+ + ++P P P N RIDR +L Sbjct: 185 LNGLNDSDEALNELAAAMKLVAPDMVHL-VLPTRPAPEQQVVLPDNERIDRAVVILS 240 >UniRef50_Q0AY43 Pyruvate formate lyase activating enzyme n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY43_SYNWW Length = 246 Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 87/245 (35%), Gaps = 39/245 (15%) Query: 118 CVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITN---VV 174 V GC L CK+C ++L E + +++ + + I + + Sbjct: 21 TVVFMQGCHLRCKYCHNPDTWELKSLSAQE-----YSPEELMEVIRRSKPYFIASGGGLT 75 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAI-S 233 G GEPLL+ + + + ++ +S + TS V L M L + Sbjct: 76 FSG-GEPLLHDDFIKAVFLLCREE---NIST---AIDTSLYVKPAALLNVMPLTNLVLAD 128 Query: 234 LHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAH 293 + N+E + ++ N+ + +++ + I YV++ D E Sbjct: 129 IKHINEEKSRCLTGMSNSLNLSNL--------KLIDSHDIPIWIRYVIIPAWTDALEDLE 180 Query: 294 QLAELLKDTPC--KINLIPWNPFPGAPY------------GRSSNSRIDRFSKVLMS-YG 338 ++A + +I+L+P++ + S +++F ++ + G Sbjct: 181 EMAAFVGQLEHVERIDLLPYHSLGKHKWDLLGYNYELNGVTTHSPEALEQFKNIISAISG 240 Query: 339 FTTIV 343 + Sbjct: 241 KPVYL 245 >UniRef50_C8WEP0 Pyruvate formate-lyase activating enzyme n=11 Tax=Bacteria RepID=C8WEP0_ZYMMN Length = 270 Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 85/242 (35%), Gaps = 42/242 (17%) Query: 118 CVSSQVGCALECKFCSTAQQGFNRN---LRVSEIIGQVWRAAKIVGAAKVTGQRPITNVV 174 V GCAL C++C F +N + ++E++ +V A + A + Sbjct: 50 FVLFLAGCALRCQYCHNPDSWFLKNGRAVTLAEMMEEVASYADFLKRAGGG-------IT 102 Query: 175 MMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL--DKLGDMIDVALAI 232 + G GEPL+ ++ GL + T+G + A D L D+ L + Sbjct: 103 ISG-GEPLVQPEFTGA---LLKAAKYLGL---HTAIDTAGFLGAQADDALLSNTDLVL-L 154 Query: 233 SLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHA 292 + A ND+ + + L + + A + V + YV++ + D Sbjct: 155 DIKAFNDKRYKALTGVE--------LQPTLAFAKWLAALKKPVWLRYVLVPGLTDNFNEI 206 Query: 293 HQLAELLKDTPC--KINLIPWNPFPGAPYG------------RSSNSRIDRFSKVLMSYG 338 LA+ +++++P++ + S + ++ + G Sbjct: 207 ANLADFAATLGNIERVDVLPFHKMGEYKWKASGLAYKLGDTQPPSPALVEDVRGIFRDNG 266 Query: 339 FT 340 Sbjct: 267 LN 268 >UniRef50_B8DNV6 Radical SAM domain protein n=13 Tax=Desulfovibrionales RepID=B8DNV6_DESVM Length = 511 Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 89/276 (32%), Gaps = 39/276 (14%) Query: 43 DQVMKWMYHYCCDN--FDEMTDINK-VLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAV 99 QV + ++ + + M L L + Sbjct: 130 RQVFRGVHRRKVEQTARELMRRYPDNRLMQHLTAKCALTYSCPAARNLCL---------- 179 Query: 100 GDQRVET---VYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAA 156 R E V + R C+S Q + C+T Q +EI+ + A Sbjct: 180 --GRYEAPLPVSRACNARCVGCISQQ---EAGSRICATPQNRMAFTPTAAEIVEVMRHHA 234 Query: 157 KIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV 216 + P+ + GEPL + A+ + + G G S + + Sbjct: 235 R------NEVAEPVFSFGQGCEGEPLTEAPLIEEAVRLFRAEGGRGTVNLN---SNASLP 285 Query: 217 PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKY-NIETFLAAVRRYLEKSNANQGRV 275 A++++ +L +SL++ +E P N+ Y LA VR + + N V Sbjct: 286 GAVERIAGAGLTSLRVSLNSAREE------PYNRYYRPHGYTLADVRESIATARRNGVFV 339 Query: 276 TIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 ++ + + D L ++++ C ++ I Sbjct: 340 SLNLLYFPGITDTEPELEALLDMVRT--CGVSFIQL 373 >UniRef50_C5BTR1 Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTR1_TERTT Length = 265 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 81/252 (32%), Gaps = 47/252 (18%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCS---TAQQGFNRNLRVSEIIGQVWRAAKI 158 E + + V Q GC C +C + V E+I QV A Sbjct: 23 HSFEKCSALDGPGLRVVVFLQ-GCQFRCLYCHNRDSWDLHAGSLYSVQEVIEQVLPFAGF 81 Query: 159 VGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVP- 217 + ++ V + G GE LL + + + GF L T+G V Sbjct: 82 LQSSNGG-------VTVSG-GEALLQWEFLTLLFKQLKK-LGFNT-----CLDTNGYVKD 127 Query: 218 -----ALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ 272 LD+L D+ L + L N + + +V ++ R + Sbjct: 128 QLWGANLDELLGYTDLVL-LDLKQMNRQRHEALVGVSN--------DRTRNFARYLADIG 178 Query: 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPY----------- 319 V I +V++ D E LA+ L+ KI L+P++ + Sbjct: 179 HPVWIRHVLVPGYTDDLEDLRSLAQFLQPMTNVEKIELLPYHRLGKPKWEEMGLEYPLGD 238 Query: 320 -GRSSNSRIDRF 330 S + ID Sbjct: 239 LEPPSRAAIDEI 250 >UniRef50_C7NCD1 Pyruvate formate-lyase activating enzyme n=2 Tax=Leptotrichia RepID=C7NCD1_LEPBD Length = 254 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 89/256 (34%), Gaps = 42/256 (16%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQ--VWRAAKIV 159 E+ + + Q GC L C +C N+ EI + + A++++ Sbjct: 18 HSFESFGTKDGPGIRFVLFLQ-GCPLRCLYCH--------NVDTWEIKDKKMIMTASEVM 68 Query: 160 GAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV--P 217 T V + GEPL+ ++ ++ + + + L TSG + Sbjct: 69 KEILKVRGFIKTGGVTVSGGEPLMQPEFLMELFKLCRE------NGIQTALDTSGYIFSD 122 Query: 218 ALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTI 277 ++ +++D+ L + + N E + + L ++ + N + Sbjct: 123 KAKQVLELVDMVL-LDIKHINPEKYKILTSVE--------LDNTLKFAKYLNEINKPTWL 173 Query: 278 EYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPYG------------RSS 323 YV++ +D H+ A+ +++++P++ + + Sbjct: 174 RYVLVPGYSDDENDLHEWAKFTSQLKNVERVDVLPFHQMGQYKWEKVGKEYKLKDTPTPT 233 Query: 324 NSRIDRFSKVLMSYGF 339 ID+ + SYG Sbjct: 234 RELIDKAEGIFRSYGL 249 >UniRef50_Q64CF5 Fe-S oxidoreductase n=2 Tax=environmental samples RepID=Q64CF5_9ARCH Length = 329 Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 28/226 (12%) Query: 125 CALECKFCSTAQQGFNRNLR-----VSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMG 179 C C +C + N R E++ ++ R + R I V +G G Sbjct: 30 CNYSCVYCQLGRTTHMTNQRKDFFPPEELLNEIKRVE------VESSHREIDFVTFVGEG 83 Query: 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV---PALDKLGDMIDVALAISLHA 236 EP L ++ ++ ++ + + T+G + + D+ + SL A Sbjct: 84 EPTL-----CKSLGWLI-RKTKEIADIPIAVDTNGSLLYREDVRNDLSQADI-VMPSLDA 136 Query: 237 PNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 E +I N+ Y F V G + +E +++ +ND L Sbjct: 137 GTAETFRKI---NRPYRGLDFETVVEGLERFRRDYNGEIWVEVMLVKGLNDSAGELEALK 193 Query: 297 ELLKDT---PCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGF 339 L IN+ P P I +L Sbjct: 194 SRLGKIEPNRTYINV-PIRPPAEPWAVPPDKEAITLAHAILNDANV 238 >UniRef50_A6LHD1 Pyruvate-formate lyase-activating enzyme n=5 Tax=Bacteria RepID=A6LHD1_PARD8 Length = 244 Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 75/229 (32%), Gaps = 35/229 (15%) Query: 102 QRVETVYIPEDDRATLCVSSQVGCALECKFCSTA-----QQGFNRNLRVSEIIGQVWRAA 156 +E+ + V Q GC L C +C + + E++ +V R Sbjct: 7 HSLESFGTVDGPGIRFVVFMQ-GCPLRCLYCHNPDTWNPKGKVKYQMTPGELLTEVLRYK 65 Query: 157 KIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVV 216 + V + G GEPLL + + + L TSG V Sbjct: 66 SFIAR---------GGVTVTG-GEPLLQPEFLKEFFRLCQEQGL------HTALDTSGFV 109 Query: 217 --PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGR 274 ++ D D+ L + + N ++ + + + + +L++ Sbjct: 110 CTSKAWEVLDYADLVL-LDIKTLNPDLHPLLAGVKQDNTLL--------FLDELERRGID 160 Query: 275 VTIEYVMLDHVNDGTEHAHQLAELLKDTPC--KINLIPWNPFPGAPYGR 321 I +V++ D E LA + K+ L+P++ Y + Sbjct: 161 TWIRHVIVPGYTDNDEWLEALARYVSSYKVVRKVELLPYHTMGTYKYEQ 209 >UniRef50_Q56JU5 NifB n=2 Tax=Paenibacillus RepID=Q56JU5_9BACL Length = 473 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 94/274 (34%), Gaps = 38/274 (13%) Query: 111 EDDRATLCVSSQVG--CALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAA--KVTG 166 + R + V C ++C +C+ + R ++ ++ Sbjct: 36 DAHRYFARMRLPVAPACNIQCHYCNR-KFDCVNESRPG-VVSELLTPELAARKTIGVAAQ 93 Query: 167 QRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG--VVPALDKLGD 224 ++ V + G G+PL N + D + LST+G ++ ++++ + Sbjct: 94 LMQLSVVGIAGPGDPLANPKATFETFRQVRDSVKDVI----FCLSTNGLTLIRHVEEIVN 149 Query: 225 MIDVALAISLHAPNDEIRDEIVPI----NKKYNIET----FLAAVRRYLEKSNANQGRVT 276 + + I+++A + I I +Y E + L ++ V Sbjct: 150 LGISHVTITINAVDPCIGSRIYGWVYDGGVRYEGEEGAALLIQRQLEGLSMLSSRGVLVK 209 Query: 277 IEYVMLDHVNDGTEHAHQLAELLKDTPCKI-NLIPWNPFPGAPY-----GRSSNSRIDRF 330 + V++ VND H ++A ++K I N++P PG+ Y + + Sbjct: 210 VNSVLIPDVND--AHLPEVARVVKGHGAAIHNIMPLIIAPGSRYEQEGRQAPRPQVVRQV 267 Query: 331 SKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVID 364 + G I+R C Q D I Sbjct: 268 QEQCAGAG-AVIMRH---------CRQCRADAIG 291 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.140 0.399 Lambda K H 0.267 0.0432 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,345,593,244 Number of Sequences: 3077464 Number of extensions: 102742456 Number of successful extensions: 312386 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 632 Number of HSP's successfully gapped in prelim test: 1720 Number of HSP's that attempted gapping in prelim test: 307701 Number of HSP's gapped (non-prelim): 2652 length of query: 384 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 254 effective length of database: 640,326,036 effective search space: 162642813144 effective search space used: 162642813144 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 94 (40.7 bits)