Phyre 2 alignment of P37769 with d1c0pa1

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Job Description | P37769
Confidence | 93.53% | Date | Thu Jan 5 11:57:37 GMT 2012
Rank | 477 | Aligned Residues | 38
% Identity | 26% | Template | d1c0pa1
SCOP info | Nucleotide-binding domain | Nucleotide-binding domain | D-aminoacid oxidase, N-terminal domain
Resolution | 1.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | F | S | L | E | G | K | V | A | V | V | T | G | C | D | T | G | L | G | Q | G | M | A | L | G | L | A | Q | A | G | C | D | I | V | G | I | N | I | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | M | M | H | S | Q | K | R | V | V | V | L | G | S | G | V | . | I | G | L | S | S | A | L | I | L | A | R | K | G | Y | S | V | H | I | L | A | R | D
Template Known Secondary structure |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  | S |  | . |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 999 | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . |  | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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