17/01/2012 18:54:23 : INFO  : Run start: Tue Jan 17 18:54:23 GMT 2012
17/01/2012 18:54:23 : INFO  : Initialised job
17/01/2012 18:54:23 : INFO  : Renaming log file 'phyre2_20120117_185423.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/phyre_20120117_185423.log'
17/01/2012 18:54:23 : INFO  : Initialised job:
Sequence
>batch____
MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFL
SLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSV
FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHN
INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVN
GYTIAVDGGWLAR

17/01/2012 18:54:23 : INFO  : Checked sequence
17/01/2012 18:54:24 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 18:54:24 : INFO  : PSI-BLAST 3 iterations
17/01/2012 18:56:50 : INFO  : PSI-BLAST 5 iterations
17/01/2012 19:01:03 : INFO  : Finished PSI-BLAST
17/01/2012 19:01:04 : INFO  : Running Buildali to generate a3m file
17/01/2012 19:52:58 : INFO  : Converting to HMM
17/01/2012 19:53:08 : INFO  : Calibrating HMM
17/01/2012 19:53:14 : INFO  : Searching HMM database
17/01/2012 19:57:54 : INFO  : Finished buildali
17/01/2012 19:57:54 : INFO  : Predicting secondary structure
17/01/2012 19:57:55 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 19:57:55 : INFO  : Predicting Disordered regions
17/01/2012 19:57:55 : INFO  : Predicted Disorder (Disopred)
17/01/2012 19:57:55 : INFO  : Running memsat_svm check
17/01/2012 20:00:02 : INFO  : Globular protein
17/01/2012 20:00:02 : INFO  : Predicted Transmembrane (memsat_svm) ID '26bbe21a52ee4f79'
17/01/2012 20:00:02 : INFO  : Initialising fold library search
17/01/2012 20:00:02 : INFO  : Initialised search input
17/01/2012 20:00:02 : INFO  : Building Ensemble models
17/01/2012 20:00:02 : INFO  : Building hh.c3cxtA_.model.1.pdb
17/01/2012 20:00:03 : INFO  : Building hh.d1geea_.model.2.pdb
17/01/2012 20:00:03 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/hh.d1geea_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/d1geea_.3.pdb
17/01/2012 20:00:03 : INFO  : Building hh.c2q2qG_.model.3.pdb
17/01/2012 20:00:05 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/hh.c2q2qG_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/c2q2qG_.4.pdb
17/01/2012 20:00:05 : INFO  : Building hh.c3uf0A_.model.4.pdb
17/01/2012 20:00:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/hh.c3uf0A_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/c3uf0A_.7.pdb
17/01/2012 20:00:06 : INFO  : Building hh.c3ak4C_.model.5.pdb
17/01/2012 20:00:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/hh.c3ak4C_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/c3ak4C_.16.pdb
17/01/2012 20:00:06 : INFO  : Building hh.c3t7cC_.model.6.pdb
17/01/2012 20:00:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/hh.c3t7cC_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/26bbe21a52ee4f79/c3t7cC_.22.pdb
17/01/2012 20:00:07 : INFO  : Building d2ae2a_.1.pdb
17/01/2012 20:00:07 : INFO  : Building c3cxtA_.2.pdb
17/01/2012 20:00:08 : INFO  : Building d1geea_.3.pdb
17/01/2012 20:00:08 : INFO  : Building c2q2qG_.4.pdb
17/01/2012 20:00:09 : INFO  : Building c2zatC_.5.pdb
17/01/2012 20:00:09 : INFO  : Building c3svtA_.6.pdb
17/01/2012 20:00:10 : INFO  : Building c3uf0A_.7.pdb
17/01/2012 20:00:10 : INFO  : Building d1fmca_.8.pdb
17/01/2012 20:00:10 : INFO  : Building d1ae1a_.9.pdb
17/01/2012 20:00:11 : INFO  : Building c3rihB_.10.pdb
17/01/2012 20:00:11 : INFO  : Building d1w6ua_.11.pdb
17/01/2012 20:00:12 : INFO  : Building d1pr9a_.12.pdb
17/01/2012 20:00:12 : INFO  : Building d2pd4a1.13.pdb
17/01/2012 20:00:13 : INFO  : Building d1k2wa_.14.pdb
17/01/2012 20:00:13 : INFO  : Building c3nugA_.15.pdb
17/01/2012 20:00:13 : INFO  : Building c3ak4C_.16.pdb
17/01/2012 20:00:14 : INFO  : Building c3iccA_.17.pdb
17/01/2012 20:00:14 : INFO  : Building c2cfcB_.18.pdb
17/01/2012 20:00:15 : INFO  : Building c3toxG_.19.pdb
17/01/2012 20:00:15 : INFO  : Building c3k31B_.20.pdb
17/01/2012 20:00:25 : INFO  : Finished HH model building
17/01/2012 20:00:25 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 20:00:32 : INFO  : html domain output complete ID '26bbe21a52ee4f79'
17/01/2012 20:30:04 : INFO  : Run end  : Tue Jan 17 20:30:04 GMT 2012
