28 c2it1B_ Probab=99.68   E-value=3.5e-15  Score=107.97  Aligned_columns=198  Identities=24%

Q ss_pred             EEEEECCCCEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEE
Q ss_conf             99993222303469963898-79998379887777999999983566555443234421798517999999528860456
Q batch____         5 RLLIRDFRNIETADLALSPG-FNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAI   83 (357)
Q Consensus         5 ~i~I~Nfr~~~~~~i~~~~~-itvivG~NgsGKStiL~ai~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~   83 (357)
                      +.+..++..++++++++.+| ++.|+|+|||||||++++|.-+...                                  
T Consensus         9 ~k~~~~~~~l~~vsl~i~~Gei~~l~G~nGaGKSTLl~~l~G~~~p----------------------------------   54 (361)
T c2it1B_           9 VKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKP----------------------------------   54 (361)
T ss_dssp             EEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCC----------------------------------
T ss_pred             EEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC----------------------------------
T ss_conf             9985898986423246889978999879998888999999568737----------------------------------


Q ss_pred             EEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf             88870588448998584343167774321001247320244304420023443210001231236776654443101000
Q batch____        84 GLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNA  163 (357)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (357)
                             ......+++...............                                                 
T Consensus        55 -------~~G~I~i~g~~~~~~~~~~~~i~~-------------------------------------------------   78 (361)
T c2it1B_          55 -------TSGKIYFDEKDVTELPPKDRNVGL-------------------------------------------------   78 (361)
T ss_dssp             -------SEEEEEETTEECTTSCHHHHTEEE-------------------------------------------------
T ss_pred             -------CCCEEEECCEECCCCCHHHCEEEE-------------------------------------------------
T ss_conf             -------611799988982009974613546-------------------------------------------------


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             00112233211210012222100111100000133347778888741010000022210001235557998875565653
Q batch____       164 ALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFERDRQ  243 (357)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  243 (357)
                                                                         -.............+..............
T Consensus        79 ---------------------------------------------------v~q~~~l~~~ltv~~n~~~~~~~~~~~~~  107 (361)
T c2it1B_          79 ---------------------------------------------------VFQNWALYPHMTVYKNIAFPLELRKAPRE  107 (361)
T ss_dssp             ---------------------------------------------------ECTTCCCCTTSCHHHHHHHHHHHTTCCHH
T ss_pred             ---------------------------------------------------EEECCCCCCCEEEEECCCCCCCCCCCCHH
T ss_conf             ---------------------------------------------------63034333100354212112222222102


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf             00001353110001122234420005777102268899999999987303899699998678686989999999999855
Q batch____       244 LTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKAT  323 (357)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~G~~~~~~~~~~~~~~~~~~~~~~~~~iiliDEpe~~LHp~~q~~l~~~l~~~  323 (357)
                      .........................+|.|+++.+.++..+..         .|.++++|||.++|+|..+..+.+.|++.
T Consensus       108 ~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~iAral~~---------~p~llllDEPts~LD~~~~~~l~~~l~~~  178 (361)
T c2it1B_         108 EIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVK---------EPEVLLLDEPLSNLDALLRLEVRAELKRL  178 (361)
T ss_dssp             HHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTT---------CCSEEEEESGGGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHC---------CCEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             221236888631265311100122332025788999998514---------87499997732289889999999999999


Q ss_pred             ----CCEEEEEECCHHHHHHCCCCCEEEEEECCCEE
Q ss_conf             ----98099983998998412216708999819889
Q batch____       324 ----QSQVFVSAISAEHVIDMSDENSKMFTVEKGKI  355 (357)
Q Consensus       324 ----~~QiiitTHs~~~i~~~~~~~~~i~~v~~G~i  355 (357)
                          +..+|++||++.-+..+.++   ++.+++|+|
T Consensus       179 ~~~~g~tvi~vtH~~~e~~~~~d~---i~vl~~G~i  211 (361)
T c2it1B_         179 QKELGITTVYVTHDQAEALAMADR---IAVIREGEI  211 (361)
T ss_dssp             HHHHTCEEEEEESCHHHHHHHCSE---EEEEETTEE
T ss_pred             HHHCCCCEEEEEECHHHHHHHCCE---EEECCCCEE
T ss_conf             987198115874067787864388---999206768