Phyre 2 alignment of Q46798 with c3fin0_

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Job Description | Q46798
Confidence | 25.62% | Date | Thu Jan 5 12:34:19 GMT 2012
Rank | 88 | Aligned Residues | 25
% Identity | 20% | Template | c3fin0_
PDB info | PDB header:ribosome | Chain: 0: PDB Molecule:50s ribosomal protein l27; | PDBTitle: t. thermophilus 70s ribosome in complex with mrna, trnas2 and ef-tu.gdp.kirromycin ternary complex, fitted to a 6.43 a cryo-em map. this file contains the 50s subunit.
Resolution | 6.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | .
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Query Sequence |  | G | N | K | G | I | D | I | S | A | P | R | G | T | P | I | Y | A | A | G | A | G | K | V | V | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | K | P | G | K | N | V | G | M | G | R | D | F | T | L | F | A | L | V | D | G | V | V | E | F
Template Known Secondary structure |  | S |  |  |  | T | T |  |  |  |  | T | T |  |  |  |  |  | S | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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