Phyre 2 alignment of Q46798 with c2kw8A_

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Job Description | Q46798
Confidence | 23.50% | Date | Thu Jan 5 12:34:19 GMT 2012
Rank | 94 | Aligned Residues | 33
% Identity | 3% | Template | c2kw8A_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:lpxtg-site transpeptidase family protein; | PDBTitle: solution structure of bacillus anthracis sortase a (srta)2 transpeptidase
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | R | G | Y | G | N | L | I | M | I | K | H | S | E | D | Y | I | T | A | Y | A | H | N | D | T | M | L | V | N | N | G | Q | S | V | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Sequence |  | M | G | K | G | N | Y | A | L | A | G | H | N | M | S | K | K | G | V | L | F | S | D | I | A | S | . | . | L | K | K | G | D | K | I | Y
Template Known Secondary structure |  | T | T | B | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T | T | T | G | G | G | . | . |  |  | T | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |  |  | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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