Phyre 2 Results for Q46798

Email | l.a.kelley@imperial.ac.uk
Description | Q46798
Date | Thu Jan 5 12:34:19 GMT 2012
Unique Job ID | 268d03a92a44ead4

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2gu1A_ |
|  | 100.0 | 31 | PDB header:hydrolase Chain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
2 | c2hsiB_ |
|  | 100.0 | 23 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative peptidase m23; PDBTitle: crystal structure of putative peptidase m23 from2 pseudomonas aeruginosa, new york structural genomics3 consortium
3 | d1qwya_ |
|  | 100.0 | 26 | Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Peptidoglycan hydrolase LytM
4 | c3nyyA_ |
|  | 100.0 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:putative glycyl-glycine endopeptidase lytm; PDBTitle: crystal structure of a putative glycyl-glycine endopeptidase lytm2 (rumgna_02482) from ruminococcus gnavus atcc 29149 at 1.60 a3 resolution
5 | c2b44A_ |
|  | 100.0 | 37 | PDB header:hydrolase Chain: A: PDB Molecule:glycyl-glycine endopeptidase lytm; PDBTitle: truncated s. aureus lytm, p 32 2 1 crystal form
6 | c3it5B_ |
|  | 99.9 | 22 | PDB header:hydrolase Chain: B: PDB Molecule:protease lasa; PDBTitle: crystal structure of the lasa virulence factor from pseudomonas2 aeruginosa
7 | c3csqC_ |
|  | 99.9 | 19 | PDB header:hydrolase Chain: C: PDB Molecule:morphogenesis protein 1; PDBTitle: crystal and cryoem structural studies of a cell wall2 degrading enzyme in the bacteriophage phi29 tail
8 | c2l9yA_ |
|  | 98.8 | 23 | PDB header:sugar binding protein Chain: A: PDB Molecule:cvnh-lysm lectin; PDBTitle: solution structure of the mocvnh-lysm module from the rice blast2 fungus magnaporthe oryzae protein (mgg_03307)
9 | c2djpA_ |
|  | 98.6 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein sb145; PDBTitle: the solution structure of the lysm domain of human2 hypothetical protein sb145
10 | d1e0ga_ |
|  | 98.3 | 29 | Fold:LysM domain Superfamily:LysM domain Family:LysM domain
11 | d1y7ma2 |
|  | 98.2 | 31 | Fold:LysM domain Superfamily:LysM domain Family:LysM domain
12 | c1y7mB_ |
|  | 97.4 | 23 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein bsu14040; PDBTitle: crystal structure of the b. subtilis ykud protein at 2 a2 resolution
13 | d2f3ga_ |
|  | 96.2 | 20 | Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like
14 | d1glaf_ |
|  | 95.9 | 20 | Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like
15 | d1gpra_ |
|  | 95.7 | 29 | Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like
16 | d2gpra_ |
|  | 95.7 | 24 | Fold:Barrel-sandwich hybrid Superfamily:Duplicated hybrid motif Family:Glucose permease-like
17 | d1e2wa2 |
|  | 95.6 | 25 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
18 | d1ci3m2 |
|  | 95.1 | 19 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
19 | c2aukA_ |
|  | 94.1 | 15 | PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of e. coli rna polymerase beta' g/g' insert
20 | c1e2vB_ |
|  | 93.8 | 25 | PDB header:electron transport proteins Chain: B: PDB Molecule:cytochrome f; PDBTitle: n153q mutant of cytochrome f from chlamydomonas reinhardtii
21 | c1ctmA_ |
| not modelled | 93.4 | 19 | PDB header:electron transport(cytochrome) Chain: A: PDB Molecule:cytochrome f; PDBTitle: crystal structure of chloroplast cytochrome f reveals a2 novel cytochrome fold and unexpected heme ligation
22 | c1q90A_ |
| not modelled | 93.3 | 25 | PDB header:photosynthesis Chain: A: PDB Molecule:apocytochrome f; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii
23 | d1dcza_ |
| not modelled | 92.7 | 23 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
24 | c2ejgD_ |
| not modelled | 91.8 | 31 | PDB header:ligase Chain: D: PDB Molecule:149aa long hypothetical methylmalonyl-coa decarboxylase PDBTitle: crystal structure of the biotin protein ligase (mutation r48a) and2 biotin carboxyl carrier protein complex from pyrococcus horikoshii3 ot3
25 | d1bdoa_ |
| not modelled | 91.3 | 18 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
26 | c2kccA_ |
| not modelled | 90.6 | 18 | PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: solution structure of biotinoyl domain from human acetyl-2 coa carboxylase 2
27 | c3n6rK_ |
| not modelled | 90.4 | 28 | PDB header:ligase Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
28 | c2b8gA_ |
| not modelled | 90.4 | 18 | PDB header:biosynthetic protein Chain: A: PDB Molecule:biotin/lipoyl attachment protein; PDBTitle: solution structure of bacillus subtilis blap biotinylated-2 form (energy minimized mean structure)
29 | d1hcza2 |
| not modelled | 90.3 | 19 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
30 | c1t5eB_ |
| not modelled | 90.1 | 30 | PDB header:transport protein Chain: B: PDB Molecule:multidrug resistance protein mexa; PDBTitle: the structure of mexa
31 | c2jxmB_ |
| not modelled | 89.9 | 23 | PDB header:electron transport Chain: B: PDB Molecule:cytochrome f; PDBTitle: ensemble of twenty structures of the prochlorothrix2 hollandica plastocyanin- cytochrome f complex
32 | d1o78a_ |
| not modelled | 89.7 | 35 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
33 | c3lnnB_ |
| not modelled | 89.7 | 26 | PDB header:metal transport Chain: B: PDB Molecule:membrane fusion protein (mfp) heavy metal cation efflux PDBTitle: crystal structure of zneb from cupriavidus metallidurans
34 | c2aujD_ |
| not modelled | 89.4 | 17 | PDB header:transferase Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert
35 | c2f1mA_ |
| not modelled | 89.0 | 13 | PDB header:transport protein Chain: A: PDB Molecule:acriflavine resistance protein a; PDBTitle: conformational flexibility in the multidrug efflux system protein acra
36 | c1tu2B_ |
| not modelled | 88.8 | 26 | PDB header:electron transport Chain: B: PDB Molecule:apocytochrome f; PDBTitle: the complex of nostoc cytochrome f and plastocyanin determin with2 paramagnetic nmr. based on the structures of cytochrome f and3 plastocyanin, 10 structures
37 | c2k33A_ |
| not modelled | 88.7 | 26 | PDB header:membrane protein, transport protein Chain: A: PDB Molecule:acra; PDBTitle: solution structure of an n-glycosylated protein using in2 vitro glycosylation
38 | c3fppB_ |
| not modelled | 88.0 | 26 | PDB header:membrane protein Chain: B: PDB Molecule:macrolide-specific efflux protein maca; PDBTitle: crystal structure of e.coli maca
39 | d1vf7a_ |
| not modelled | 87.9 | 30 | Fold:HlyD-like secretion proteins Superfamily:HlyD-like secretion proteins Family:HlyD-like secretion proteins
40 | c2ejmA_ |
| not modelled | 87.5 | 30 | PDB header:ligase Chain: A: PDB Molecule:methylcrotonoyl-coa carboxylase subunit alpha; PDBTitle: solution structure of ruh-072, an apo-biotnyl domain form2 human acetyl coenzyme a carboxylase
41 | c2dn8A_ |
| not modelled | 87.3 | 30 | PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: solution structure of rsgi ruh-053, an apo-biotin carboxy2 carrier protein from human transcarboxylase
42 | d1brwa3 |
| not modelled | 87.0 | 24 | Fold:alpha/beta-Hammerhead Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain Family:Pyrimidine nucleoside phosphorylase C-terminal domain
43 | d1laba_ |
| not modelled | 86.9 | 13 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
44 | d1tu2b2 |
| not modelled | 85.9 | 21 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
45 | c2q8iB_ |
| not modelled | 85.7 | 13 | PDB header:transferase Chain: B: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase component of PDBTitle: pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug2 radicicol
46 | c2l5tA_ |
| not modelled | 84.5 | 17 | PDB header:transferase Chain: A: PDB Molecule:lipoamide acyltransferase; PDBTitle: solution nmr structure of e2 lipoyl domain from thermoplasma2 acidophilum
47 | d1y8ob1 |
| not modelled | 84.3 | 13 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
48 | d1qjoa_ |
| not modelled | 83.7 | 26 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
49 | d2pnrc1 |
| not modelled | 82.1 | 13 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
50 | c2dncA_ |
| not modelled | 81.0 | 22 | PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase protein x component; PDBTitle: solution structure of rsgi ruh-054, a lipoyl domain from2 human 2-oxoacid dehydrogenase
51 | d1ghja_ |
| not modelled | 80.8 | 16 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
52 | c2dneA_ |
| not modelled | 80.0 | 17 | PDB header:transferase Chain: A: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase PDBTitle: solution structure of rsgi ruh-058, a lipoyl domain of2 human 2-oxoacid dehydrogenase
53 | c3h9iB_ |
| not modelled | 78.2 | 17 | PDB header:transport protein Chain: B: PDB Molecule:cation efflux system protein cusb; PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli
54 | c2j0fC_ |
| not modelled | 77.9 | 25 | PDB header:transferase Chain: C: PDB Molecule:thymidine phosphorylase; PDBTitle: structural basis for non-competitive product inhibition in2 human thymidine phosphorylase: implication for drug design
55 | c1otpA_ |
| not modelled | 77.7 | 24 | PDB header:phosphorylase Chain: A: PDB Molecule:thymidine phosphorylase; PDBTitle: structural and theoretical studies suggest domain movement produces an2 active conformation of thymidine phosphorylase
56 | d1uoua3 |
| not modelled | 77.2 | 26 | Fold:alpha/beta-Hammerhead Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain Family:Pyrimidine nucleoside phosphorylase C-terminal domain
57 | d1k8ma_ |
| not modelled | 76.7 | 9 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
58 | c2dsjA_ |
| not modelled | 76.6 | 27 | PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase; PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8
59 | c2jkuA_ |
| not modelled | 76.1 | 26 | PDB header:ligase Chain: A: PDB Molecule:propionyl-coa carboxylase alpha chain, PDBTitle: crystal structure of the n-terminal region of the biotin2 acceptor domain of human propionyl-coa carboxylase
60 | c3fmcC_ |
| not modelled | 75.7 | 20 | PDB header:hydrolase Chain: C: PDB Molecule:putative succinylglutamate desuccinylase / aspartoacylase; PDBTitle: crystal structure of a putative succinylglutamate desuccinylase /2 aspartoacylase family protein (sama_0604) from shewanella amazonensis3 sb2b at 1.80 a resolution
61 | c2e75C_ |
| not modelled | 75.6 | 21 | PDB header:photosynthesis Chain: C: PDB Molecule:apocytochrome f; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus
62 | c2qj8B_ |
| not modelled | 72.6 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:mlr6093 protein; PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution
63 | c2qf7A_ |
| not modelled | 71.9 | 19 | PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase protein; PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli
64 | d1pmra_ |
| not modelled | 71.3 | 19 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
65 | c3cdxB_ |
| not modelled | 70.7 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:succinylglutamatedesuccinylase/aspartoacylase; PDBTitle: crystal structure of2 succinylglutamatedesuccinylase/aspartoacylase from3 rhodobacter sphaeroides
66 | d1gjxa_ |
| not modelled | 70.7 | 17 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
67 | c3na6A_ |
| not modelled | 70.1 | 28 | PDB header:hydrolase Chain: A: PDB Molecule:succinylglutamate desuccinylase/aspartoacylase; PDBTitle: crystal structure of a succinylglutamate desuccinylase (tm1040_2694)2 from silicibacter sp. tm1040 at 2.00 a resolution
68 | d2tpta3 |
| not modelled | 70.1 | 21 | Fold:alpha/beta-Hammerhead Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain Family:Pyrimidine nucleoside phosphorylase C-terminal domain
69 | d1mzya2 |
| not modelled | 65.8 | 11 | Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins
70 | d1iyua_ |
| not modelled | 65.8 | 14 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
71 | c3ozxA_ |
| not modelled | 65.4 | 14 | PDB header:hydrolase, translation Chain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
72 | c2xhaB_ |
| not modelled | 62.1 | 20 | PDB header:transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of domain 2 of thermotoga maritima n-utilization2 substance g (nusg)
73 | c2dafA_ |
|  | 54.6 | 30 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:flj35834 protein; PDBTitle: solution structure of the novel identified ubiquitin-like2 domain in the human hypothetical protein flj35834
74 | c3h5qA_ |
| not modelled | 54.0 | 21 | PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside phosphorylase; PDBTitle: crystal structure of a putative pyrimidine-nucleoside phosphorylase2 from staphylococcus aureus
75 | c1brwB_ |
| not modelled | 53.7 | 26 | PDB header:transferase Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase); PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation
76 | d1o4ua2 |
| not modelled | 49.5 | 16 | Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:NadC N-terminal domain-like
77 | d1qapa2 |
| not modelled | 45.4 | 26 | Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:NadC N-terminal domain-like
78 | d1k8ga2 |
| not modelled | 41.4 | 19 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
79 | d1qpoa2 |
| not modelled | 39.5 | 26 | Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:NadC N-terminal domain-like
80 | d1jb7a2 |
| not modelled | 39.3 | 19 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
81 | c2xhcA_ |
| not modelled | 38.7 | 20 | PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of thermotoga maritima n-utilization substance g2 (nusg)
82 | c3camB_ |
| not modelled | 36.3 | 26 | PDB header:gene regulation Chain: B: PDB Molecule:cold-shock domain family protein; PDBTitle: crystal structure of the cold shock domain protein from neisseria2 meningitidis
83 | c3a5dB_ |
| not modelled | 34.5 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:v-type atp synthase alpha chain; PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase
84 | d1ndsa2 |
| not modelled | 33.0 | 17 | Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins
85 | d2ns0a1 |
| not modelled | 29.9 | 13 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RHA1 ro06458-like
86 | d2zjrt1 |
| not modelled | 28.3 | 28 | Fold:Barrel-sandwich hybrid Superfamily:Ribosomal L27 protein-like Family:Ribosomal L27 protein
87 | d1v8qa_ |
| not modelled | 28.1 | 19 | Fold:Barrel-sandwich hybrid Superfamily:Ribosomal L27 protein-like Family:Ribosomal L27 protein
88 | c3fin0_ |
| not modelled | 25.6 | 20 | PDB header:ribosome Chain: 0: PDB Molecule:50s ribosomal protein l27; PDBTitle: t. thermophilus 70s ribosome in complex with mrna, trnas2 and ef-tu.gdp.kirromycin ternary complex, fitted to a 6.43 a cryo-em map. this file contains the 50s subunit.
89 | c2boyC_ |
| not modelled | 25.3 | 24 | PDB header:oxidoreductase Chain: C: PDB Molecule:3-chlorocatechol 1,2-dioxygenase; PDBTitle: crystal structure of 3-chlorocatechol 1,2-dioxygenase from2 rhodococcus opacus 1cp
90 | d1vf5c2 |
| not modelled | 24.3 | 44 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
91 | d1snra2 |
| not modelled | 24.2 | 16 | Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins
92 | c2elmA_ |
| not modelled | 24.0 | 27 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 10th c2h2 zinc finger of human2 zinc finger protein 406
93 | d3pcca_ |
| not modelled | 23.5 | 9 | Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase
94 | c2kw8A_ |
| not modelled | 23.5 | 3 | PDB header:protein binding Chain: A: PDB Molecule:lpxtg-site transpeptidase family protein; PDBTitle: solution structure of bacillus anthracis sortase a (srta)2 transpeptidase
95 | d2awna2 |
| not modelled | 23.1 | 12 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like
96 | d2bura1 |
| not modelled | 22.7 | 18 | Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase
97 | d2es2a1 |
| not modelled | 22.5 | 28 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
98 | c2yz2B_ |
| not modelled | 22.2 | 18 | PDB header:hydrolase Chain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system
99 | d2burb1 |
| not modelled | 21.6 | 18 | Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase