Phyre 2 alignment of Q46798 with c2dafA_

Return to main results | Retrieve Phyre Job Id

Job Description | Q46798
Confidence | 54.56% | Date | Thu Jan 5 12:34:19 GMT 2012
Rank | 73 | Aligned Residues | 27
% Identity | 30% | Template | c2dafA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:flj35834 protein; | PDBTitle: solution structure of the novel identified ubiquitin-like2 domain in the human hypothetical protein flj35834
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | R | L | H | F | Q | I | R | Y | R | A | T | A | I | D | P | L | R | Y | L | P | P | Q | G | S | K | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | H | S | V | L | Q | I | R | Y | S | G | K | I | L | K | N | N | E | T | L | V | Q | H | G | V | K | P
Template Known Secondary structure |  |  | T | T | T |  |  |  |  |  | T | T |  |  |  |  | S | S |  |  |  |  |  |  | S |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions