127 c1vmaA_ Probab=97.75   E-value=0.00065  Score=42.01  Aligned_columns=131  Identities=22%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEHHHCCHHHHHHHHHCCEEEEEECCCCCCCCCHHH
Q ss_conf             45246879988999869999889999999610488851687622663442736678886327279850665588864888
Q batch____        28 GVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALE  107 (228)
Q Consensus        28 ~is~~i~~Ge~~~i~G~nGaGKSTLl~~l~G~~~p~~G~I~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e  107 (228)
                      .+++.-.+..+++++||||+||||.+-=++..+.-..-.+.+-..|.++.                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf             54655543048958899999999997588046765212089999999999999850897999838899989899999999
Q batch____       108 NVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIAD  187 (228)
Q Consensus       108 ~i~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~LS~Gq~qrv~ia~al~~~p~llilDEPt~gLD~~~~~~i~~  187 (228)
                                    .+.+....+.+.+|+.-.......+++.=.++-+..++  ..+-+++|.|-|-.+-.....-.=+.
T Consensus       134 --------------gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~  197 (294)
T c1vmaA_         134 --------------AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELR  197 (294)
T ss_dssp             --------------HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHH
T ss_pred             --------------HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf             --------------47999999997619828974883698999999999999--77998999818889878579999999


Q ss_pred             HHHHHHHH-----CCCEEEEEE
Q ss_conf             99999986-----598899980
Q batch____       188 LLFSLNRE-----HGTTLIMVT  204 (228)
Q Consensus       188 ~i~~l~~~-----~~~tii~~s  204 (228)
                      .+.+....     ...++++.+
T Consensus       198 ~~~~~~~~~~~~~p~~~~LVl~  219 (294)
T c1vmaA_         198 KVHRVVKKKIPDAPHETLLVID  219 (294)
T ss_dssp             HHHHHGGGTCTTCCSEEEEEEE
T ss_pred             HHHHHHHHCCCCCCCEEEEEEE
T ss_conf             9999963035668853999811