BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (717 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P22708 Protein traD n=73 Tax=root RepID=TRAD2_ECOLX 1434 0.0 UniRef50_B7JCL9 Conjugal transfer protein TraD n=11 Tax=root Rep... 860 0.0 UniRef50_B6ICH4 TraD protein n=1 Tax=Escherichia coli SE11 RepID... 582 e-164 UniRef50_D1S138 Conjugal transfer protein TraD n=1 Tax=Serratia ... 547 e-154 UniRef50_C8QEC7 Type IV conjugative transfer system coupling pro... 539 e-151 UniRef50_A4WGU5 Type IV secretory pathway VirD4 components-like ... 531 e-149 UniRef50_B2VB35 TraD protein n=1 Tax=Erwinia tasmaniensis RepID=... 471 e-131 UniRef50_D2TZY7 Conjugal transfer protein TraD n=1 Tax=Arsenopho... 468 e-130 UniRef50_A8QYR8 TraD protein n=8 Tax=Gammaproteobacteria RepID=A... 459 e-127 UniRef50_B8EFQ3 Type IV conjugative transfer system coupling pro... 455 e-126 UniRef50_D0Z587 IncF plasmid conjugative transfer protein TraD n... 376 e-102 UniRef50_Q5ZTT3 TraD n=1 Tax=Legionella pneumophila subsp. pneum... 365 3e-99 UniRef50_D1RMM8 Type IV conjugative transfer system coupling pro... 333 2e-89 UniRef50_C9NPT6 Type IV secretory pathway VirD4 component n=1 Ta... 317 7e-85 UniRef50_B2I3X2 Type IV secretory pathway, VirD4 component n=1 T... 282 3e-74 UniRef50_Q6MB84 Putative conjugative transfer protein traD n=2 T... 277 8e-73 UniRef50_A5CC23 Conjugative transfer protein n=48 Tax=cellular o... 276 2e-72 UniRef50_Q0HXY0 Putative uncharacterized protein n=1 Tax=Shewane... 271 5e-71 UniRef50_Q31SG4 Membrane protein, n=6 Tax=Enterobacteriaceae Rep... 270 2e-70 UniRef50_A0B526 Type IV secretory pathway VirD4 components-like ... 270 2e-70 UniRef50_A1WDH0 TraD n=3 Tax=Burkholderiales RepID=A1WDH0_ACISJ 270 2e-70 UniRef50_A3VMZ9 TraD n=1 Tax=Parvularcula bermudensis HTCC2503 R... 269 3e-70 UniRef50_Q1NH25 TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25... 257 1e-66 UniRef50_C9CRW4 TraG n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9... 255 3e-66 UniRef50_D0SGZ6 Type IV secretory pathway protein n=1 Tax=Acinet... 253 2e-65 UniRef50_Q3HKI7 TraG n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 245 5e-63 UniRef50_B0RKL6 TraD n=2 Tax=Yersinia RepID=B0RKL6_YEREN 243 1e-62 UniRef50_C4Z014 Putative conjugative transfer protein TraD n=1 T... 241 6e-62 UniRef50_A4XE63 Type IV secretory pathway VirD4 components-like ... 240 1e-61 UniRef50_Q1N8W8 Type IV secretory pathway VirD4 components-like ... 225 5e-57 UniRef50_Q2G6A0 Type IV secretory pathway VirD4 components-like ... 214 7e-54 UniRef50_Q2QCR0 TraJ n=1 Tax=Pseudomonas sp. CT14 RepID=Q2QCR0_9... 193 2e-47 UniRef50_A5G187 Type IV secretory pathway VirD4 components-like ... 191 1e-46 UniRef50_C5SIG6 Type IV secretory pathway VirD4 protein-like pro... 183 2e-44 UniRef50_B5YII5 Putative conjugative transfer protein TraD n=1 T... 178 8e-43 UniRef50_B8GZQ6 Bacterial conjugation protein, ATP binding domai... 177 9e-43 UniRef50_Q04230 TrwB n=5 Tax=Proteobacteria RepID=Q04230_ECOLX 174 8e-42 UniRef50_B9MIL1 Putative type IV secretory pathway VirD4 compone... 170 2e-40 UniRef50_C7HYW0 Putative type IV secretory pathway VirD4 compone... 166 3e-39 UniRef50_Q32X91 Probable TrwB n=1 Tax=Xanthomonas axonopodis pv.... 164 1e-38 UniRef50_B7Q9R6 Coupling protein TraD, putative (Fragment) n=1 T... 164 2e-38 UniRef50_A9I2I0 Type IV secretion system protein VirD4 n=1 Tax=B... 159 3e-37 UniRef50_A5FU76 Type IV secretory pathway VirD4 components-like ... 154 8e-36 UniRef50_Q7X127 TrwB n=8 Tax=Gammaproteobacteria RepID=Q7X127_XANCI 152 5e-35 UniRef50_C1F5K1 Conserved domain protein n=2 Tax=Acidobacterium ... 150 2e-34 UniRef50_A5V2N2 Type IV secretory pathway VirD4 components-like ... 149 5e-34 UniRef50_B9BFK1 TrwB protein n=1 Tax=Burkholderia multivorans CG... 147 1e-33 UniRef50_B6AM16 Conjugation TrwB n=4 Tax=Leptospirillum sp. Grou... 147 2e-33 UniRef50_B2TH73 Type IV secretion system protein VirD4 n=1 Tax=B... 146 2e-33 UniRef50_B6AM17 Plasmid coupling TrwB n=1 Tax=Leptospirillum sp.... 139 4e-31 UniRef50_Q17U09 TraJ n=11 Tax=root RepID=Q17U09_ECOLX 139 4e-31 UniRef50_C1F4S3 Conserved domain protein n=1 Tax=Acidobacterium ... 136 3e-30 UniRef50_Q3SHV9 Putative type IV secretory pathway VirD4 compone... 135 5e-30 UniRef50_C6RJZ5 Putative uncharacterized protein n=1 Tax=Acineto... 133 2e-29 UniRef50_A9ATZ0 Type IV secretion system protein n=1 Tax=Burkhol... 131 1e-28 UniRef50_A3ETT1 Probable conjugal transfer protein (TraD) n=1 Ta... 130 2e-28 UniRef50_C6DZ92 Sigma 54 interacting domain protein n=1 Tax=Geob... 128 7e-28 UniRef50_B6ASB1 Conjugal transfer protein, TraB n=2 Tax=Leptospi... 125 6e-27 UniRef50_D1BL71 Type IV secretory pathway VirD4 protein-like pro... 117 2e-24 UniRef50_Q21BL2 Putative type IV secretory pathway VirD4 compone... 112 4e-23 UniRef50_B4WW43 Putative uncharacterized protein n=1 Tax=Synecho... 102 7e-20 UniRef50_Q3SI88 Putative type IV secretory pathway VirD4 compone... 94 3e-17 UniRef50_B8KYV9 Putative type IV secretory pathway VirD4 compone... 87 2e-15 UniRef50_A4JFK6 Type IV secretory pathway VirD4 components-like ... 82 7e-14 UniRef50_B4B5T3 Putative uncharacterized protein n=1 Tax=Cyanoth... 80 4e-13 UniRef50_B2FKA6 Putative type IV secretory protein conjugation p... 77 2e-12 UniRef50_A5ESM8 Putative uncharacterized protein n=1 Tax=Bradyrh... 75 6e-12 UniRef50_A7BSA0 TraG/TraD family protein n=1 Tax=Beggiatoa sp. P... 74 2e-11 UniRef50_B4WW44 Putative uncharacterized protein n=2 Tax=Synecho... 70 2e-10 UniRef50_A6BIV1 Putative uncharacterized protein n=2 Tax=Clostri... 69 7e-10 UniRef50_C2W8G4 Type IV secretory pathway VirD4 component n=2 Ta... 66 5e-09 UniRef50_B0RB09 Putative conjugal trasnfer protein n=2 Tax=Clavi... 63 3e-08 UniRef50_A8ZL40 Putative uncharacterized protein n=2 Tax=Acaryoc... 63 3e-08 UniRef50_A6GWX0 Putative mobilization protein, TraG family n=1 T... 63 4e-08 UniRef50_Q7NIZ2 Glr2040 protein n=1 Tax=Gloeobacter violaceus Re... 63 5e-08 UniRef50_A6NS50 Putative uncharacterized protein n=1 Tax=Bactero... 62 7e-08 UniRef50_A4J2S8 TRAG family protein n=1 Tax=Desulfotomaculum red... 61 1e-07 UniRef50_UPI00019793E0 cag island protein,DNA transfer protein (... 61 1e-07 UniRef50_C2HF17 Putative uncharacterized protein n=1 Tax=Finegol... 60 3e-07 UniRef50_A8ZPA8 Putative uncharacterized protein n=1 Tax=Acaryoc... 59 5e-07 UniRef50_D2LPL0 Type IV secretory pathway VirD4 protein-like pro... 59 6e-07 UniRef50_A6UMU5 TRAG family protein n=5 Tax=Rhizobiales RepID=A6... 58 1e-06 UniRef50_B4WVQ4 Putative uncharacterized protein n=1 Tax=Synecho... 57 2e-06 UniRef50_A6L5Y8 Mobilisation protein C n=20 Tax=Bacteroides RepI... 57 2e-06 UniRef50_B7KK02 Transfer complex protein TrsK-like protein n=4 T... 57 2e-06 UniRef50_A8SY67 Putative uncharacterized protein n=1 Tax=Coproco... 57 3e-06 UniRef50_C8WH79 TRAG family protein n=1 Tax=Eggerthella lenta DS... 56 6e-06 UniRef50_B9JPS9 TRAG protein n=1 Tax=Agrobacterium radiobacter K... 54 2e-05 UniRef50_Q8YK80 All8037 protein n=3 Tax=Nostoc RepID=Q8YK80_ANASP 54 3e-05 UniRef50_C2ZYM5 TraG/TraD n=2 Tax=Bacillus cereus RepID=C2ZYM5_B... 53 3e-05 UniRef50_B9D155 VirD4 n=1 Tax=Campylobacter rectus RM3267 RepID=... 52 6e-05 UniRef50_A8ZPT9 Putative uncharacterized protein n=1 Tax=Acaryoc... 52 7e-05 UniRef50_B1X2K3 Putative uncharacterized protein n=1 Tax=Cyanoth... 52 8e-05 UniRef50_Q8ZSH1 Alr7539 protein n=6 Tax=Nostocaceae RepID=Q8ZSH1... 52 9e-05 UniRef50_Q5V7P5 TraD protein n=1 Tax=Haloarcula marismortui RepI... 52 9e-05 UniRef50_A3IXB1 Transfer complex protein TrsK-like n=2 Tax=Cyano... 52 9e-05 UniRef50_Q7M994 CONJUGAL TRANSFER PROTEIN (TRAG) n=1 Tax=Wolinel... 52 1e-04 UniRef50_Q8R8F9 ATPase involved in conjugal plasmid transfer n=3... 51 1e-04 UniRef50_B1BR15 ATPase involved in conjugal plasmid transfer n=1... 51 1e-04 UniRef50_A4IU07 TrsK n=4 Tax=Geobacillus RepID=A4IU07_GEOTN 50 2e-04 UniRef50_B7KLU0 Transfer complex protein TrsK-like protein n=3 T... 50 3e-04 UniRef50_B5Z5X5 TrsK protein n=3 Tax=Bacillus cereus group RepID... 50 3e-04 UniRef50_D1KAH2 TraG protein n=1 Tax=Bacteroides sp. 3_1_33FAA R... 50 3e-04 UniRef50_Q4EJ40 Tn5252, Orf 21 protein, internal deletion, putat... 50 4e-04 UniRef50_A8ZPM8 Putative uncharacterized protein n=2 Tax=Acaryoc... 50 4e-04 UniRef50_B4WV81 Putative uncharacterized protein n=1 Tax=Synecho... 50 5e-04 UniRef50_Q30Q33 Putative uncharacterized protein n=1 Tax=Sulfuri... 49 5e-04 UniRef50_B6JL32 VirD4 coupling protein n=6 Tax=Helicobacter pylo... 49 5e-04 UniRef50_C5EJN7 Predicted protein n=1 Tax=Clostridiales bacteriu... 48 0.001 UniRef50_A5KZI0 Type IV secretory pathway, VirD4 component n=1 T... 47 0.002 UniRef50_A6Q5N4 Putative uncharacterized protein n=1 Tax=Nitrati... 47 0.003 UniRef50_Q8GJE7 VirD4 n=1 Tax=Campylobacter jejuni subsp. jejuni... 47 0.003 UniRef50_B6JNL0 VirD4 coupling protein n=10 Tax=Helicobacter Rep... 47 0.003 UniRef50_B3ESQ2 Putative uncharacterized protein n=1 Tax=Candida... 47 0.004 UniRef50_B8I7H6 TRAG family protein n=23 Tax=Bacteria RepID=B8I7... 47 0.004 UniRef50_C6X7V8 Type IV secretory pathway VirD4 protein-like pro... 46 0.004 UniRef50_D2LEB9 TRAG family protein n=1 Tax=Rhodomicrobium vanni... 46 0.006 UniRef50_C2BD69 TraG/TraD family protein n=1 Tax=Anaerococcus la... 46 0.006 UniRef50_Q03BN9 Type IV secretory pathway, VirD4 component n=2 T... 46 0.006 UniRef50_Q74H31 TraD protein, putative n=1 Tax=Geobacter sulfurr... 45 0.007 UniRef50_C8W0M1 TRAG family protein n=1 Tax=Desulfotomaculum ace... 45 0.010 UniRef50_Q03N56 Type IV secretory pathway, VirD4 component n=2 T... 45 0.010 UniRef50_A3SLA3 TRAG protein n=1 Tax=Roseovarius nubinhibens ISM... 45 0.012 UniRef50_C5D068 TRAG family protein n=1 Tax=Variovorax paradoxus... 45 0.014 UniRef50_UPI00016C445C hypothetical protein GobsU_08007 n=1 Tax=... 44 0.026 UniRef50_C7CWB6 Predicted protein n=2 Tax=Enterococcus faecalis ... 44 0.028 UniRef50_A3W6B6 Type IV secretion system coupling protein n=1 Ta... 43 0.035 UniRef50_B8HZ08 Putative uncharacterized protein n=1 Tax=Cyanoth... 43 0.036 UniRef50_UPI00016C4AF4 Agrobacterium virulence virD4-like protei... 43 0.052 >UniRef50_P22708 Protein traD n=73 Tax=root RepID=TRAD2_ECOLX Length = 738 Score = 1434 bits (3711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 698/741 (94%), Positives = 708/741 (95%), Gaps = 27/741 (3%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWIL+GLVLW+KISWQTF+NGCIY Sbjct: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILIGLVLWVKISWQTFINGCIY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 WWCT+LEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWC EQLWSAFVLA+VVAL Sbjct: 61 WWCTSLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVAL 120 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII Sbjct: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP Sbjct: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS Sbjct: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 YSKLVDTLLSIKIEKLRT+LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN Sbjct: 301 YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 G+PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV Sbjct: 361 GDPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA+LFDVMNTRA Sbjct: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRA 480 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL Sbjct: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 PDLTCYVTLPGPYPAVKLSLKYQ RPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA Sbjct: 541 PDLTCYVTLPGPYPAVKLSLKYQARPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 Query: 601 SLFEPDVPEVVSGEDVTQAE------------------------QPQQPVSPAINDKKSD 636 SLFE PEV SGEDVTQAE QPQQPVS INDKKSD Sbjct: 601 SLFE---PEVASGEDVTQAEQPQQPQQPQQPQQPQQPQQPQQPQQPQQPVSSVINDKKSD 657 Query: 637 SGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRR 696 +GV+VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQ MQRR Sbjct: 658 AGVSVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQHMQRR 717 Query: 697 EEVNINVHRERGEDVEPGDDF 717 EEVNINVHRERGEDVEPGDDF Sbjct: 718 EEVNINVHRERGEDVEPGDDF 738 >UniRef50_B7JCL9 Conjugal transfer protein TraD n=11 Tax=root RepID=B7JCL9_ECOLX Length = 432 Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/416 (98%), Positives = 415/416 (99%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSFNAKDMTQGGQIASMRIRMFSQIANI+LYCLFIFFWILVGLVLW+KISWQTFVNGCIY Sbjct: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIILYCLFIFFWILVGLVLWVKISWQTFVNGCIY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 WWCTTLEGMRDLI+SQPVYEIQYYGKTFRMNAAQVLHDKYMIWC EQLWSAFVLA+VVAL Sbjct: 61 WWCTTLEGMRDLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVAL 120 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 VICLITFFVVSWILGRQGKQQSENE+TGGRQLTDNPK+VARMLKKDGKDSDIRIGDLPII Sbjct: 121 VICLITFFVVSWILGRQGKQQSENEITGGRQLTDNPKEVARMLKKDGKDSDIRIGDLPII 180 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP Sbjct: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS Sbjct: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 YSKLVDTLLSIKIEKLRT+LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN Sbjct: 301 YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR Sbjct: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 >UniRef50_B6ICH4 TraD protein n=1 Tax=Escherichia coli SE11 RepID=B6ICH4_ECOSE Length = 728 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 291/633 (45%), Positives = 411/633 (64%), Gaps = 4/633 (0%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWC 63 + K +TQGGQ+ S + MF Q+ + + L FF I + L W+++ W+T NG +YWW Sbjct: 3 STKHITQGGQVFSYMLNMFMQVNKRVSFWLIWFFVIFLPLFFWLRLPWETIRNGGLYWWL 62 Query: 64 T-TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVI 122 + T G + L + PVY+I + G+ + Q+L D YM+W LA A V Sbjct: 63 SLTARGEKALYRVPPVYDIPWNGQVLHATSEQILKDDYMVWAGNMFLQELYLALFWASVA 122 Query: 123 CLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRD 182 + F++ L R G++Q+++E GGR+LTD+ K VAR +++ G+ S I I LP++ + Sbjct: 123 VGVLAFLIFRFLRRLGEKQAQDERIGGRELTDDVKAVAREMRRRGEASSICIDKLPLLLN 182 Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 SE+Q ++GT GAGKS + +L R RGDM +IYD+ +K ++ D +LN LD Sbjct: 183 SEVQYLMMYGTPGAGKSNTLNKLLKQIRARGDMAIIYDKGCSLIKKHFSEQDDVLLNALD 242 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYS 302 RCA WD+++E + PDFD+ A+TLIPMGTKEDPFWQ S RTIF+ AY + + SY+ Sbjct: 243 RRCAYWDMFREFESIPDFDSAASTLIPMGTKEDPFWQSSARTIFSAVAYRQKKNGIHSYN 302 Query: 303 KLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG- 361 L+ TLL+I ++ LR YL + A+NLVEEK+EKTAISIR+VLTNYVKA+RYLQGIE G Sbjct: 303 ALLRTLLAIDLKALRDYLTGTEASNLVEEKVEKTAISIRSVLTNYVKALRYLQGIERTGR 362 Query: 362 EPFTIRDWMRGVREDQ--KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR 419 PFTIR+WM V + Q ++GWL+++SNA H SLKP+ISMWL+ A LL MGEN++RR Sbjct: 363 RPFTIREWMSTVNDPQITRHGWLWVTSNARQHESLKPLISMWLAQAANCLLGMGENQHRR 422 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 +WF DELP+L+KLP+L +L EARKFGGC+V G Q+ AQ++ YG++ A ++ ++NTR Sbjct: 423 IWFIYDELPSLNKLPELPGVLAEARKFGGCFVLGFQAKAQMDYTYGKEFADAMLGLVNTR 482 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 FFRSPS AE+ EIG++ SEQYSYGAD VRDGVS K E + LV+Y+DIQ Sbjct: 483 YFFRSPSSTEAEWVQREIGQRRDKVFSEQYSYGADTVRDGVSFSKVEEDRYLVNYTDIQK 542 Query: 540 LPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQM 599 LP+L CYVT PG YPAV++ + Y+ A E + RDIN ++ + + + RE E + Sbjct: 543 LPNLHCYVTFPGEYPAVRMRMSYEKIKDCAEELLLRDINDSLDPEIESEITRREDEDGDI 602 Query: 600 ASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIND 632 A+L + V +D PQ + ++N+ Sbjct: 603 AALLDRIAQGNVRKDDEQNKTAPQPEQAESLNN 635 >UniRef50_D1S138 Conjugal transfer protein TraD n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S138_SEROD Length = 786 Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust. Identities = 284/644 (44%), Positives = 398/644 (61%), Gaps = 22/644 (3%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS + K++TQGGQI + + RMF QI N + + +F+ F I+ GL +++ +T NG Y Sbjct: 1 MSMSTKNITQGGQILAYQYRMFLQINNKIGFWIFMMFLIITGLGVFLVTPLETIQNGSWY 60 Query: 61 WWCTTLEGMRDLIKSQPV-YEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAFV 113 W+ + L ++ Y+I+Y+ T +M Q+L D YMI E+LW+ Sbjct: 61 WFANINKSFLFLSENDTTTYDIKYFYAPTKVMYTLKMTMTQMLGDPYMIAMGEKLWNRIT 120 Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 ++ + + F +++W +G+ GK+QS +E+ G +LTD+PK V ++LK++G+ SD+ Sbjct: 121 YTSMFSGGFSISVFCLITWYIGKIGKEQSSDEILSGMELTDDPKVVNKLLKENGECSDLS 180 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 + L +++ SEI N +HGT+ GKS +IR L R+RGD +I+D FV+S Y P Sbjct: 181 VYHLHLVKQSEILNLLMHGTISVGKSTIIRYLLKQIRERGDRAIIWDSGCTFVESNYRPD 240 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM-GTKEDPFWQGSGRTIFAEAAYL 292 D ++NP D RCA W LW EC PD+DN AN+LIP+ G DPFW S RTIF+ AA Sbjct: 241 KDFLMNPYDERCANWHLWGECSNMPDYDNMANSLIPVEGESTDPFWVSSARTIFSSAASQ 300 Query: 293 MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 M DP +S K + LLS+ I+ LR+YL ++ AA+LV+EKIEKTAISIR+V+TNY K++R Sbjct: 301 MDTDPEQSIEKFLRVLLSLSIKNLRSYLEHTEAASLVDEKIEKTAISIRSVITNYAKSLR 360 Query: 353 YLQGIEHNGEP-FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 YLQG++ +G+P FTIRDWM + WLFIS+NA +SL+P+ISMWLS+A L++ Sbjct: 361 YLQGLDRSGKPRFTIRDWM--TNPAMSDSWLFISANAQQKSSLRPLISMWLSLATINLMS 418 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 MG++ RRVWF DELP L KLP+L ++ EARKFGGC+V GIQ+ QL IYG S Sbjct: 419 MGQDAKRRVWFILDELPGLQKLPELPGVMAEARKFGGCFVIGIQNMPQLIQIYGRNMGES 478 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 LFD++NTR + RSPS +A+ E+G + +A EQYSYG D +RDGVS KD R+ + Sbjct: 479 LFDLLNTRFYGRSPSATVAKLVEAELGMQRRKEAKEQYSYGPDQIRDGVSLAKDKVREPI 538 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD----INPEMENRLSA 587 V Y I LP+L YV LPG YP KL LKY P I R+ +NPE+E Sbjct: 539 VDYDQIMRLPNLNFYVRLPGEYPVTKLKLKYLDSKNTQPALILRNFNESLNPEIEK---- 594 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIN 631 L A+L P P G+ VT P +P+ PA+N Sbjct: 595 -LVQHNERAASAANLIFPINPYEEGGDTVTAKPIP-EPM-PAVN 635 >UniRef50_C8QEC7 Type IV conjugative transfer system coupling protein TraD n=2 Tax=Pantoea sp. At-9b RepID=C8QEC7_9ENTR Length = 880 Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust. Identities = 279/662 (42%), Positives = 407/662 (61%), Gaps = 27/662 (4%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSF K++TQGGQ+ + R+RMF Q++N + + + + F V ++ W+ NG Y Sbjct: 1 MSFTPKNLTQGGQMTAYRLRMFGQVSNWIFHWILLLFIAAVAVLFWLTTPDDVLRNGFWY 60 Query: 61 WWCTTLEGMRDLI--KSQPVYEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAF 112 W + L + ++I ++ T +M Q+L D +M + + AF Sbjct: 61 WAAWPSHSLLGLAPGTTTATWDILWHCGDGTSLCTTKMTPVQLLADPWM----QAMGDAF 116 Query: 113 VLAAVVALVICLITFF----VVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK 168 V + +C IT F +++W +GR GK++SE+E G LTD PK+V R+LKK G+ Sbjct: 117 VASLKFLATVCGITAFALWCLIAWFVGRIGKKESEDEFISGMTLTDQPKEVNRLLKKAGE 176 Query: 169 DSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS 228 SD++IG L +++++E+ NF +HGT+G GKS +IR L +Y R+RGD +IYD G F+++ Sbjct: 177 KSDLQIGGLHMVKNAEVMNFLIHGTIGVGKSTLIRWLLDYIRRRGDRAIIYDSGGTFIET 236 Query: 229 YYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAE 288 +Y+P DKILNP D+RC W LW+EC D++N L+P+ DPFW S RTIF++ Sbjct: 237 HYNPRRDKILNPHDSRCENWVLWRECREVVDYENLTAALMPVEGDSDPFWVSSSRTIFSD 296 Query: 289 AAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYV 348 A DP RS + TLLSI ++ LR +L+N+P+ANLVEEKIEKTAISIR+VLTNY Sbjct: 297 GAMQFAADPARSIETFLKTLLSIDLKSLREFLKNTPSANLVEEKIEKTAISIRSVLTNYA 356 Query: 349 KAIRYLQGIEHNGEP-FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 K++RYLQG++ G+P F+IR+WM G + D + WLFIS+ A +++P+ISMWLS+A Sbjct: 357 KSLRYLQGLDKEGKPEFSIREWMTGAQYD--SSWLFISTTARHRRAVRPLISMWLSLATL 414 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L +MGEN RRVWF DE+ +L K+P+L E L EARKFGGC+V G+Q+ QL IYG + Sbjct: 415 LLQSMGENSGRRVWFIGDEIASLQKIPELNETLAEARKFGGCFVLGVQNIPQLVHIYGRE 474 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A ++FD++NTRA+ RSPS ++A+ E+G + +A EQ SYG D VRDG+S KD Sbjct: 475 MAKAIFDLLNTRAYGRSPSAEVAKMVEEELGHQRRREAREQNSYGLDQVRDGISISKDKV 534 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSA 587 + +V Y I +P+L Y+ LPG YP VKLSLKY+ + K I RD + L Sbjct: 535 NEPVVDYDLIMKMPNLRFYMRLPGEYPVVKLSLKYRKQRKSHRALIERDFRDRLSPELER 594 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPV----SPAINDKKSDSGVNVPA 643 ++ + E R A + P E++ +V ++ +PV SP K +D+ PA Sbjct: 595 IIESNERSAR-AADISFPTGEEILEAGNVQSVQKVPEPVAVPASPVTVRKVTDT---TPA 650 Query: 644 GG 645 G Sbjct: 651 PG 652 >UniRef50_A4WGU5 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGU5_ENT38 Length = 840 Score = 531 bits (1367), Expect = e-149, Method: Compositional matrix adjust. Identities = 278/645 (43%), Positives = 399/645 (61%), Gaps = 14/645 (2%) Query: 14 IASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLI 73 + + R RMF Q+ N + + +FI F +L + + +I +T NG ++W+ DL+ Sbjct: 1 MTAYRWRMFLQVNNWIGFWIFILFAVLASAIFFWRIPQETLDNGSLWWFAWMNSSFIDLM 60 Query: 74 -KSQP-VYEIQY-YGKT-----FRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLI 125 S P +Y+I Y Y T +M AQ+ D YM +Q+ S A + + V + Sbjct: 61 PASAPKLYDIHYWYAPTQTPMVLKMTLAQIFTDPYMTAMGDQVLSELQWAGLASGVFSMA 120 Query: 126 TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEI 185 F V+W + G+++SE+E G LTD DV ++L+++G+ SD+R+GDL ++R +E+ Sbjct: 121 VFLAVTWYIVGIGRRESEDEYLSGMTLTDKAADVNQLLRRNGELSDLRVGDLHMVRMAEV 180 Query: 186 QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARC 245 NF +HGT+G GKS +IR L +Y R+RGD +IYD F +++Y+P D ILN D RC Sbjct: 181 MNFLMHGTIGVGKSTLIRWLLDYIRKRGDRAIIYDSGCTFTETHYNPDTDFILNAHDDRC 240 Query: 246 AAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLV 305 A W LW EC+ D+DN A++LIP+ + DPFW S RTIFA+ A M DP+RS K + Sbjct: 241 ANWQLWGECVDAVDYDNMASSLIPVEGESDPFWVSSSRTIFADLAIRMSVDPDRSIEKFL 300 Query: 306 DTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE-PF 364 TLLS+ ++ LR YL N+P+ANLVEEKIEKTAISIR+V+TNY K++RYLQG++ + PF Sbjct: 301 KTLLSLSMKSLREYLANTPSANLVEEKIEKTAISIRSVVTNYAKSLRYLQGLDDGVKPPF 360 Query: 365 TIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFC 424 TIR+WM +E+ + WLFIS+ A S++P+IS+W+S+A L +MGEN +RRVWF Sbjct: 361 TIREWM--TKEEHDSSWLFISTQARHRKSVRPLISLWVSLATMMLQSMGENSDRRVWFIY 418 Query: 425 DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS 484 DE+P+L ++P+L E L EARKFGGC+V G+Q+ AQL +YG + A S+FD+MNTR + RS Sbjct: 419 DEIPSLQRIPELAETLAEARKFGGCFVLGMQNMAQLVHVYGRELAKSIFDLMNTRMYGRS 478 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 PS ++A+ E+G + K EQ SYG D VRDGVS GKD +V Y + LP+L Sbjct: 479 PSAEMAKVVEEELGNQRKRKIREQNSYGLDQVRDGVSLGKDEVNNPIVDYEQVMRLPNLN 538 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE 604 YV LPG YP V+L LKY+ + K P I R+I+ + L V+ A E +A L Sbjct: 539 FYVRLPGEYPVVRLKLKYREQKKHHPGLIERNIHDALSPELEKVIQANE-RAASVAGLAF 597 Query: 605 PDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQE 649 P EV+ E + +E +PA + V A I Q+ Sbjct: 598 PTGDEVL--EKGSNSETATTINTPATVRQTPVVAKPVTASAISQK 640 >UniRef50_B2VB35 TraD protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB35_ERWT9 Length = 788 Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust. Identities = 248/635 (39%), Positives = 375/635 (59%), Gaps = 26/635 (4%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWI---LVG---LVLWIKISWQTF 54 MSF D+T+GGQI + R++MF+Q+ N + FWI L+G L ++ + Sbjct: 1 MSFRPSDITKGGQITAYRVKMFNQVNN------WFSFWIVTVLMGASLLAFFLVTPPEII 54 Query: 55 VNGCIYWWCTTLEGMRDLIKSQPVYEIQY--YGKTFRMNA-----AQVLHDKYMIWCSEQ 107 NG YW + E L+ + Y Y +++ VL + M + Sbjct: 55 SNGLTYWIARSSESFLGLVVNDTAKAFSYAIYRGDLKLSEVPLTLGDVLRSQIMRDVGDV 114 Query: 108 LWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDG 167 + A V + LI +F++ + + R GK+++ +E G TD+PK V +ML ++ Sbjct: 115 FLIRLEMYAGVGATLSLIIYFILMFGVARIGKKETADEYISGMTRTDSPKVVNKMLAQNR 174 Query: 168 KDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK 227 S I+IG L +++++EIQNF +HGT+G GKS +IR L +Y R+RGD +++D G F+K Sbjct: 175 ALSPIKIGPLHMVKNAEIQNFLIHGTIGTGKSTIIRYLLDYIRKRGDRFIVFDPGGTFIK 234 Query: 228 SYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFA 287 ++++ D IL+P DARCA WDLW EC T D++N A++LIP+ DPFW S RTI A Sbjct: 235 THFNARRDFILDPHDARCANWDLWHECQTVVDYENFASSLIPIEGNSDPFWVSSSRTICA 294 Query: 288 EAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNY 347 + A M N + + T+LS+ ++ LR +L+N+P+ANLVEEKIEKTAISIR+V TNY Sbjct: 295 DTAMRMSRKENPTIEDFLHTILSLSLKSLREFLKNTPSANLVEEKIEKTAISIRSVTTNY 354 Query: 348 VKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 KA+R++QG+ + F+IR+W++ R Q + LFIS+N S + +ISMWLS+A Sbjct: 355 AKALRFMQGVNQGQDKFSIREWIQDNR--QSHSGLFISTN--FLRSTRSLISMWLSMATT 410 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L +MGE+RNRRVWF DE+ +L K+P E L +ARK+GGC+V GIQ+ AQ+ D YG Sbjct: 411 LLQSMGEDRNRRVWFIYDEVASLQKIPGFRETLADARKYGGCFVLGIQNMAQMSDTYGRD 470 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A ++ D++NTR + RSPS +A E+G + ++ EQ S+G D VRDG+S G+D Sbjct: 471 NAKAVLDLVNTRIYGRSPSSDMATDVQNELGYQRRWESKEQNSFGLDQVRDGISIGRDKV 530 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSA 587 + +V +I SLPDL + LPG YP +KL++ Y+ PK A +I R + + + Sbjct: 531 HEPVVDKEEIMSLPDLRFFFRLPGEYPVIKLAVPYRDLPKKAESYIERSFHDSLSPLIEK 590 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQP 622 ++ E+E + + F P G+ EQP Sbjct: 591 IIEHNESE---IPADFTEATPAQAVGQSKAAQEQP 622 >UniRef50_D2TZY7 Conjugal transfer protein TraD n=1 Tax=Arsenophonus nasoniae RepID=D2TZY7_9ENTR Length = 687 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 243/595 (40%), Positives = 364/595 (61%), Gaps = 13/595 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS +A++MTQGGQ+ + MF QIANI+ + + I ++ + ++I + ++G Y Sbjct: 3 MSLDARNMTQGGQVIKYMVAMFMQIANIVAFWVIIATVMVFFATIAVQIPLEKMIHGLAY 62 Query: 61 WWCTTLE-GMRDLIKSQPVYEIQYY------GKT--FRMNAAQVLHDKYMIWCSEQLWSA 111 W L +++ I + ++ G+ F A +V D+Y I+C L A Sbjct: 63 WAIDKLVIPLQEAIGTSEGGTFTFHWLNPRTGQVIEFEKTAREVRLDRYFIYCYVLLKEA 122 Query: 112 FVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD 171 A VA + V W LG++G QQ +NE+ GGR L ++ K++ + LK GK S Sbjct: 123 AFWAWGVASFTFVGLIVAVFWWLGKKGAQQRKNEIIGGRYLANSVKEINQFLKAKGKLSS 182 Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 ++IGDL ++ +SE QN LHGTVG GKS VI L R++ ++YD+ F+ +Y Sbjct: 183 LKIGDLHLVENSEQQNIGLHGTVGTGKSTVINDLLTQVRKQRKRAIVYDKGNNFIPLFYR 242 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 D ILNP+DARC WDLW+EC + DF+ A L P DPFW S R +F A Sbjct: 243 EGKDIILNPMDARCPNWDLWRECQDRADFETFALPLFPDAKSGDPFWLMSARLLFVATAE 302 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 MR+ P+RS KL+ LLSI + +L +++ + AANLV+ IEKTA++IR VL+ YVKA+ Sbjct: 303 HMRSHPDRSIKKLLQRLLSISLAELHDFVQGTDAANLVDGSIEKTAMTIRTVLSAYVKAL 362 Query: 352 RYLQGIEHNGE-PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 RY QG+E + PF+IR+W++ ED W+FISS+ H +LKP+IS WL++ ++ +L Sbjct: 363 RYCQGLEKESKPPFSIREWVQNANED---AWIFISSDGRLHTALKPLISTWLNLTMQSVL 419 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 A+ +R R+W DELP+LHKLP + + L EARKFGG + GIQ+++QLE YG A Sbjct: 420 ALTPSRESRIWTVLDELPSLHKLPVISDYLSEARKFGGATLIGIQNFSQLEANYGAHDAR 479 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 +++D+ NT +FR+PS +AE+ E+GE LK +QYSYG D +RDGV+ K+ R+ Sbjct: 480 NIWDLANTSLYFRAPSGSVAEWVQKELGETRLLKFRDQYSYGVDTIRDGVNFSKEDTREK 539 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRL 585 +VS+SDIQ+L DL C+V+L G P VKL+L+++ +A I RD++ +N++ Sbjct: 540 IVSFSDIQNLDDLECFVSLRGNVPIVKLTLEHKPYETIAAGKIERDVSAVFDNQI 594 >UniRef50_A8QYR8 TraD protein n=8 Tax=Gammaproteobacteria RepID=A8QYR8_9GAMM Length = 621 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 236/577 (40%), Positives = 354/577 (61%), Gaps = 13/577 (2%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIM-LYCLFIFFWILVGLV-LWIKISWQTFVNGCIYW 61 N K T+GGQI+ +RM+ QI + + CL FWI+ LV +W IS + + I++ Sbjct: 6 NFKHYTRGGQISFHNLRMWDQITKTLSMICLI--FWIVFTLVFVWFFISLEKITHAVIFY 63 Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 + LE ++ + +E+ ++GKT++ +L+ Y + + + +A+ A Sbjct: 64 YAQFLE----IVGQKHTFELSFHGKTYKQTVDSILNYAYYQDNANHVIHSLGKSALWAFC 119 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 + I +++ ++GK QS+++ G Q + V + + +D SDI I P+I+ Sbjct: 120 LSFILGLCLAYYFIKRGKAQSDSQFVRGSQF-KHSNVVKKKILRDKAHSDITIDTFPLIK 178 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPL 241 +SE+Q+ +HGTVG GKS++I ++ + R+RGD V++YD+ F+ YY D ILNP Sbjct: 179 NSEVQHVLVHGTVGTGKSQLIMKIMDCLRKRGDRVIVYDKGCSFIAHYYQDESDVILNPF 238 Query: 242 DARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY 301 D RCA WD+W E DF+N A + IPM + DPFW + RT+F+ +MR+ +RS Sbjct: 239 DKRCANWDMWLEAPRDSDFENMAESSIPMHGESDPFWVNASRTVFSCLGSVMRHHSDRSV 298 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 KL+ +L+ + L YL+ +PAA LV KIEKTAISIRA LT Y+K+ L + G Sbjct: 299 EKLLKLILTDEFSDLEEYLQGTPAATLVSSKIEKTAISIRATLTTYLKSFSALAELNQEG 358 Query: 362 EP-FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 +P F+IRD+ + ++Q+ GWLFISSN +TH SLKP+ISMWL+ A LL++ +RNRR+ Sbjct: 359 KPPFSIRDY---ILDEQQKGWLFISSNGETHKSLKPLISMWLAQASLALLSLTPDRNRRI 415 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 WF CDELP+LHKLP L E + E RKFGGC++ G+QS++QL +YG+ +FD++NTR Sbjct: 416 WFICDELPSLHKLPLLGETIAEVRKFGGCFLLGMQSFSQLTKVYGQAGGREIFDLLNTRF 475 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 FFRSPS +A A E+GE+E ++ E YSYGA+ +RDG+S G + +VSY I L Sbjct: 476 FFRSPSSDMARLVASELGEEEIEESRENYSYGANSIRDGISLGAQRVTRPIVSYPQIMEL 535 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDI 577 DL C+V LPG YP +L+L R FI R++ Sbjct: 536 KDLHCFVRLPGHYPITQLTLDLGFRTIKTNGFIERNM 572 >UniRef50_B8EFQ3 Type IV conjugative transfer system coupling protein TraD n=14 Tax=Gammaproteobacteria RepID=B8EFQ3_SHEB2 Length = 708 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 236/595 (39%), Positives = 363/595 (61%), Gaps = 24/595 (4%) Query: 1 MSFNAK-----DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFV 55 M+ N K + T+GGQI +RMF QI +++ IL L+ ++ I T Sbjct: 1 MTLNPKRTKGSNYTRGGQILFHNLRMFLQINAVLIRWTCYGVLILTALLCFLFIDKDTLT 60 Query: 56 NGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLA 115 YW T+ R V + ++ G + L + +I + + W + Sbjct: 61 GAYYYWINQTVSMFR---PESHVMQTEWQGTVYTSTLGSQLQNPILIAANSRFWLWSQIY 117 Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 +++ VI + V W ++G +Q+E G Q PK++A+ LKKD + SD ++ Sbjct: 118 FLISCVIGFVFLSVAMWFFKKKGDEQTEEHFIRGMQ-KATPKELAKQLKKDKRQSDFKLD 176 Query: 176 DLPIIRDS-EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 + I ++ E+Q+ L GT GAGKS +R+ + R+RGD +IYD+ FV +Y+P+ Sbjct: 177 GIGIFKERFEVQHLLLDGTTGAGKSVALRKFLTWIRERGDKAIIYDKGCTFVSKFYNPAT 236 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR 294 D +LNP D RCA WD+W + DF+N A+ LIP + DPFW S RTIF+ A+ M+ Sbjct: 237 DVLLNPFDERCAYWDVWCDAHEPSDFENMASALIPQHGEGDPFWVQSARTIFSSTAFKMQ 296 Query: 295 NDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 ++P N++ +L++ +L+ ++E L YL+ + +A+LV +KI+KTAISI++VL Y+K++R Sbjct: 297 DEPKMNQTTERLLELMLTSELESLSEYLKGTESASLVSDKIQKTAISIKSVLAAYIKSLR 356 Query: 353 YLQGI-EHNGE------PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 +L G+ E +G+ F+IR+W V+ D +NG+LF+SSNA HASL+P+ISMWLSIA Sbjct: 357 FLAGLDEKDGQGKLLRRKFSIREW---VKNDAENGFLFLSSNAQQHASLRPLISMWLSIA 413 Query: 406 IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 +L E+ +RR+W DE P+LHKLP+L E + E RKFGGCYV GIQS+AQL+ +YG Sbjct: 414 STAILEQDEDPDRRIWVLMDEAPSLHKLPELAETIAEVRKFGGCYVIGIQSFAQLKKVYG 473 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 E AA +FD++NTR FFRSPS+++A+ ++ ++GE+E + EQYSYGA+ +RDGVS G Sbjct: 474 ENAALEMFDLLNTRLFFRSPSNEMAKISSHDLGEQEVDVSKEQYSYGANEIRDGVSLGHQ 533 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY-QTRPKVAPEFIPRDINP 579 + +V+ S+I L DL ++ PG YP V++ L++ Q R AP FI R+ P Sbjct: 534 TITRPVVTPSEIMQLEDLQFWLRTPGNYPVVRVDLEFNQMRSLCAP-FIKRNYTP 587 >UniRef50_D0Z587 IncF plasmid conjugative transfer protein TraD n=3 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z587_LISDA Length = 711 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 202/580 (34%), Positives = 320/580 (55%), Gaps = 18/580 (3%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWC 63 N K T+GGQI +RM+ QI ++ + +I L + I + Y++ Sbjct: 12 NTKAFTRGGQITFHNLRMYFQILAVIGSWSMVIAFIFTALFAYFLIDIDQLL-ALKYYFH 70 Query: 64 TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC 123 + D + Y G+ + A ++L + + ++ LA + + Sbjct: 71 AKYLALPD-----TKIMVMYQGQEYPYTAEKLLSSERFNASVDDVFLDIQLAFIFSFFAV 125 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDS 183 +I F V+ ++G++Q+++ + G ++ P+++ R LKKD S ++ L ++ ++ Sbjct: 126 MIAFMKVTKYFEKKGEEQTQDYLIRGTEIA-TPQELERRLKKDKNTSPFKLDGLSLLPNN 184 Query: 184 -EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 EI++ G+ G GKS IR+L R RGD +IYD+ FV +YD D ILNP D Sbjct: 185 FEIRHLSFSGSTGTGKSVAIRKLLREIRARGDKAIIYDKGCTFVSRFYDEHKDYILNPFD 244 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN-RSY 301 R W +W + DF++ + LI DPFW S RT+F AY M D + Sbjct: 245 ERSVDWKIWYDAQEFSDFESLSTALIADSGHGDPFWIESARTLFTNTAYQMTQDGKPLTN 304 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH-- 359 +L+D +L LR +L+ + A+ + +EK +K AIS++++L Y+K++RYL+G++ Sbjct: 305 ERLLDYILKTPTSVLREFLKGTMASAITDEKADKIAISVKSILAAYIKSLRYLEGLDQQD 364 Query: 360 -NGE---PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN 415 NG+ F++RDW V +D + G+LF++SNA H SL+P+ISMWLS A +L + E+ Sbjct: 365 KNGKRRKAFSVRDW---VLDDNEKGFLFLTSNAQQHVSLRPLISMWLSTASTAILGLDES 421 Query: 416 RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 RR+W DELP+LH+LPDL L E RK GGCY+ G QS+AQ IYG AA ++D+ Sbjct: 422 TTRRIWVITDELPSLHRLPDLASTLAEVRKHGGCYLVGFQSFAQFVKIYGRDAAEEMYDL 481 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 +NTR +FR+PS AE ++ ++GE+E + EQYSYGA+ VRDG+S G + V S Sbjct: 482 LNTRFYFRNPSAPQAEKSSKDLGEQEIEISKEQYSYGANSVRDGISLGHQTITRPAVMTS 541 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 +I +L DL C+ G YP +++ K+ VA FI R Sbjct: 542 EIMALDDLQCWYRTFGGYPITRINFKFDDMASVAVPFIKR 581 >UniRef50_Q5ZTT3 TraD n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTT3_LEGPH Length = 630 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 201/585 (34%), Positives = 331/585 (56%), Gaps = 17/585 (2%) Query: 1 MSFN-AKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKIS-WQTFVNGC 58 M+ N K +GGQI +RMF+Q+ + + I F+I + + S +Q ++ Sbjct: 2 MAVNPTKLFIRGGQIFLHNVRMFTQVGKKVSLAMLIVFFIFSVIAFYFNTSAYQRYIG-- 59 Query: 59 IYWWCTTLEGMRDLIKSQPVYEIQY-YGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAV 117 W + M LI+S+ ++ G+++ + +AQ++ +I QL A + + + Sbjct: 60 -QQWVKA-QAM-TLIQSKAKQVVRMPTGESYPVYSAQIVKAPMVIGIVNQLKQALLKSMI 116 Query: 118 VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL 177 AL ++ V+ L ++G+ QS+ ++ G +L D + + +KK + S RIG + Sbjct: 117 EALFASVMMLIVMVKWLQKRGENQSKAKIIRGSELVDE-NTLQKCIKKTSRISPYRIGGV 175 Query: 178 PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKI 237 + SE Q+ + GT G+GK+ IR L + RG+ +IYD+ G ++ +Y D I Sbjct: 176 SLPFGSETQHIQIVGTTGSGKTVAIRDLLTTIQARGERAIIYDKGGTYLSRFYREHQDVI 235 Query: 238 LNPLDARCAAWDLWKECLTQPDFDNTANTLIPM--GTKEDPFWQGSGRTIFAEAAYLMRN 295 LNPLD R +W++W EC + D + A ++PM DPFW + R IF A ++N Sbjct: 236 LNPLDTRGHSWNVWAECEDKADLEALAEAIMPMPINNTMDPFWIKAARMIFVSTANELKN 295 Query: 296 DPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQ 355 DP RS L+ LL+ + ++ LR++ + +LV +K++KTA++++ V+ Y+K++ YL+ Sbjct: 296 DPKRSNLMLLQYLLTADLGRIHHLLRHTESESLVSDKVQKTALNVKTVMATYLKSLLYLK 355 Query: 356 GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN 415 +G+ F+IRDW + +Q N LF+SS+ H +++P+IS W++ A + LL++ + Sbjct: 356 D---DGDIFSIRDW---ILNEQNNSCLFVSSDGRKHPTIRPLISAWINTATKELLSLAPD 409 Query: 416 RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 NRRVWF DEL TLH LP L + E+RKFGGC++ G +QL IYG AASL ++ Sbjct: 410 DNRRVWFILDELATLHALPFLAAVKSESRKFGGCFLLGHHGASQLRTIYGNDGAASLSNL 469 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 +TR F R P H AE A+ IG E + +E SYGA+ +RDG+S + + + LV + Sbjct: 470 CSTRLFLRLPEHTDAEHASRNIGTYEIEEVNESISYGANTMRDGISVSRQTKEKQLVLPT 529 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPE 580 IQ + DL Y+ + G +PA K+ L Y P + EFI RDI+P+ Sbjct: 530 QIQVINDLQGYLRVKGEFPAAKIKLNYVDYPLIHEEFIARDIDPD 574 >UniRef50_D1RMM8 Type IV conjugative transfer system coupling protein TraD n=2 Tax=Legionella RepID=D1RMM8_LEGLO Length = 665 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 197/590 (33%), Positives = 322/590 (54%), Gaps = 40/590 (6%) Query: 11 GGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQ--------------TFVN 56 GGQI + +M Q++N + + + F +L +++ S + F N Sbjct: 15 GGQIFDYKTKMMIQVSNRIFHWAVLGFVVLFSMIMAFYASSELKLVALHHISRFLVKFHN 74 Query: 57 GCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAA 116 G W T L G + +Y K+ + A+ L + IW Q+ + + Sbjct: 75 GEYVLW-TNLNGSK--------ITAFFYQKSPLIQASVHLAQE-TIWRKAQI--SLIFGG 122 Query: 117 VVALVICLI--TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKD-SDIR 173 V L+I L+ FF+ + G++ ++++ G +L D+PK+ + + + + SDI+ Sbjct: 123 AVYLLITLLFSRFFI------KLGEKYTKDQFISGTRLADSPKETIKSVNESQRGASDIK 176 Query: 174 IGD-LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP 232 + + LP+ + SE Q HGT GAGK++ + L R G+ +IYD+ ++D Sbjct: 177 LLNRLPMPKFSEKQGMLFHGTTGAGKTQAMMMLLEQIRALGEPAIIYDKECTIKPYFFDE 236 Query: 233 SIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAY 291 ID LNP+ CA W +W+EC +F + A LIP + DPFW S RTIF A+ Sbjct: 237 RIDVELNPVSKLCANWKMWRECANPLEFGSFATYLIPKSVQGSDPFWVDSARTIFTSMAW 296 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 +R+ + L+ LL+ +E++R L+ + + NLV ++IEKTAISI++VL Y KA+ Sbjct: 297 KIRDYAEKDPVFLLQLLLTTSLEEIRNILKGTESENLVSKEIEKTAISIKSVLATYTKAL 356 Query: 352 RYLQGIEHNG-EPFTIRDWMRGVREDQK--NGWLFISSNADTHASLKPVISMWLSIAIRG 408 R+L+G+E +G E F+I++W+ + +K GWLFI+S + H +KP+IS+WL +A++G Sbjct: 357 RFLEGLEKSGKEDFSIKEWIENTADPKKYNKGWLFITSRSKYHKEIKPLISLWLGLAMQG 416 Query: 409 LLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 + ++ N R+W DEL +LH+L + + L + RKFGGC GIQS AQL+ IYG Sbjct: 417 VQSLVANNKGRIWLVMDELASLHRLETISDTLADIRKFGGCVAIGIQSIAQLDFIYGTHE 476 Query: 469 AASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMER 528 A ++ D++NT +FRSP K+A++ + ++G + + E SYG D VRDG + G + Sbjct: 477 AGAIADLLNTSIYFRSPKSKVAKWVSEDLGPQVINEMKESQSYGPDSVRDGNTVGSQRTK 536 Query: 529 QTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 + V DI +L D+ CYV L G +P +L +Y R ++ I R IN Sbjct: 537 RNTVEEGDIMTLDDMECYVRLVGNHPITRLKNQYIERKEICVPLIERTIN 586 >UniRef50_C9NPT6 Type IV secretory pathway VirD4 component n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT6_9VIBR Length = 604 Score = 317 bits (813), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 180/482 (37%), Positives = 277/482 (57%), Gaps = 23/482 (4%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE-VTGGRQLTDNPKDVARMLKK 165 + W FV A +A+ + L+T I+ R G S + + GG+Q+ P + R + + Sbjct: 100 RFWRQFVPALELAVGVGLLTMMSFVIIMIRLGVTASRDRLIRGGKQVP--PAQLEREMHR 157 Query: 166 DGKDSDIR----IGDLPIIRDS-EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD 220 G S R +G ++ E Q+ + GT G+GKS +IR + R RGD V+YD Sbjct: 158 -GTSSPSRAPLCLGGFDVLHPHFERQHVRIEGTTGSGKSVLIREFLAWIRARGDRAVVYD 216 Query: 221 RSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG 280 + FV ++Y P D +LNP DAR WDLW + DF++ A+ LIP + DPFW Sbjct: 217 KGCSFVGTFYRPETDVLLNPYDARSVNWDLWADATDAADFEHQASALIPASPQGDPFWNE 276 Query: 281 SGRTIFAEAAYLMRNDPNR-SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAIS 339 S R++FA A +RN+ + +L+ L + + L +L N+ AA V + I+KTA+S Sbjct: 277 SARSVFASVARQLRNESRPPTTERLLALLTTSDLTTLSNFLANTEAATYVSKDIKKTALS 336 Query: 340 IRAVLTNYVKAIRYLQGIEHNGEP------FTIRDWMRGVREDQKNGWLFISSNADTHAS 393 I+ VLT Y +++R LQG++ P F+I DW VR+D G++F++S+A H + Sbjct: 337 IQTVLTTYARSLRCLQGLDRQDRPAHLRQRFSITDW---VRDDSATGFMFLTSHARHHVA 393 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 L+P+IS+WL+IA +L + E+ RR+W DELP+L +LP+L L E RKFGGC+V Sbjct: 394 LRPLISLWLAIASNAILGLSESHERRLWVILDELPSLQQLPELASTLAEVRKFGGCFVIS 453 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 +QS+AQL YG A ++ D++N+R FFRSPSH +A+ A+ E+GE++ + Sbjct: 454 LQSHAQLIKNYGAHDAQAICDLLNSRFFFRSPSHAMAKVASQELGEQDIDVVRHGQTLTP 513 Query: 514 DPVRDGVSTGKDMERQT--LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 RD S ++++R T +++ + IQ+LPDL C+V PG KL L Y T K P+ Sbjct: 514 RARRDARS--RNLQRLTRPIITPTQIQALPDLHCFVRSPGTDWVAKLVLPYVTVEKAEPD 571 Query: 572 FI 573 F+ Sbjct: 572 FV 573 >UniRef50_B2I3X2 Type IV secretory pathway, VirD4 component n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X2_ACIBC Length = 719 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 181/606 (29%), Positives = 305/606 (50%), Gaps = 23/606 (3%) Query: 5 AKDMTQGGQIASMRIRMF-SQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYW-- 61 A + T+G +I + RMF S + N++++ L I I+ L+IK+ F+ + + Sbjct: 9 AIEFTRGSEIWIHQFRMFISSMMNVIVFGLMITIGIVCAF-LYIKLKDVHFLALSVQYDI 67 Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 W ++ D ++ ++ + + ++ AQ + + Y ++ AF+L + L Sbjct: 68 WLKSVFNNPD---ARVALKLNGVVRDYTLDQAQHIINPYFNQLKFYVFRAFILG--ILLS 122 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 L+ + W GK+ +E G +L N + ++ G S +I ++P+++ Sbjct: 123 SFLVGGLIYYWF--TYGKEVMSDEQIRGSELVSNDALIYKIQSTKGF-SPYKISNIPMVK 179 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPL 241 ++E N + G G+GKS++ R + R ++YD SGEF +Y P ID ILNP Sbjct: 180 NTEGTNVGIFGAPGSGKSQIFRDHLSQVRNNKRKAIVYDPSGEFTSEFYRPGIDIILNPF 239 Query: 242 DARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY 301 D R W + E FD+ AN +P+ K DP++ +GRT+ AE + + S Sbjct: 240 DERMPYWSPFFEIRHDEHFDSIANAFVPVEGK-DPYFGEAGRTVLAEVMRELHANGIHSN 298 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 L DT+ IE++ + L + A+ V++K EKTA+++ + N ++A RYL +G Sbjct: 299 KTLHDTIAHFTIEEISSVLEGTAASKHVDKKAEKTALAVLTTVQNKLRAFRYLPD---SG 355 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 F+IRDW+ ED W+F+S + +++P+I++W SI I+ ++ + +W Sbjct: 356 TQFSIRDWVSRPEED---SWIFLSLREEQKTTIEPLITLWFSIFIKAVMNLEPIHRELLW 412 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 +CDE PTL K+ DL L RKFG C+ G+Q QLE+ YGEK A S+ + T+ F Sbjct: 413 MYCDEFPTLPKMDDLPLSLTNTRKFGLCHFLGLQDIPQLEEKYGEKIARSIISALQTKVF 472 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 +R ++ A+ + +G+ E + + S G + RDG S + +V S+I LP Sbjct: 473 YRVNENETAKRMSEILGQMEVAEKNMSRSMGVNDSRDGDSFITQRRERFIVLPSEIMKLP 532 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 DLT Y+ +PG YP K++ KY K P FI R E +SA A E + + Sbjct: 533 DLTGYLRVPGDYPVTKITQKYHPHLKNVPAFIER----ENMGFISAFAVAEALESQSNSD 588 Query: 602 LFEPDV 607 EP V Sbjct: 589 GKEPLV 594 >UniRef50_Q6MB84 Putative conjugative transfer protein traD n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB84_PARUW Length = 556 Score = 277 bits (709), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 180/567 (31%), Positives = 295/567 (52%), Gaps = 32/567 (5%) Query: 6 KDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTT 65 + +T+GGQ+ + +RMF Q+ + F+ WI+V L ++ N + Sbjct: 5 QTITEGGQLTTHSVRMFKQVTKTSFFITFVL-WIIVFLYQMRDVNTFYLQNVLYFEQARF 63 Query: 66 LEGMR-DLIKSQPVYEIQYYGKTFR-MNAAQVLH------DKYMIWCSEQL-WSAFVLAA 116 + + D IK P + +Q + + QVL D++ ++ SAF A Sbjct: 64 YQVLHIDTIKVDPSFGLQRGSQDVKEYTTDQVLRLTKPYADRFYRITKQRFQHSAFWALA 123 Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD 176 +++V + F +G+Q + G L+ + LK + S I IG Sbjct: 124 PLSVVFAIFFF---------RGRQSIKKHHLKGNTLSSVWLTRWK-LKLSRRASPISIGS 173 Query: 177 LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDK 236 LP+I+ +E Q+ + G G+GK+ + L RQ+ +I D +G + YY D Sbjct: 174 LPLIKGTETQHIMITGGTGSGKTNCLHHLLKSVRQQKQRAIIVDTTGLLTERYYRAGKDI 233 Query: 237 ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRN 295 +LNPLD+R A W W EC+ + + A + IP + D +W+ S R + +++ Sbjct: 234 LLNPLDSRGAPWHPWIECIDKTSYATMAESFIPQSLSDSDNYWRTSARIVLGSLFEQLKD 293 Query: 296 DPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQ 355 + S L D +L +++L +++ + AA+L++ EKTA SIRAV++N++ L Sbjct: 294 I--QKNSTLADKILRDPLQELCDFVQGTKAASLIDMNSEKTAASIRAVMSNFLTCFELLA 351 Query: 356 GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN 415 + +PF+IR+W++ +ED + WLFIS + A+L P++S WLS+A+R LLA+ N Sbjct: 352 NTD---QPFSIREWIQ--QEDPIDNWLFISCKTNERAALNPLLSCWLSVAVRSLLALPPN 406 Query: 416 RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 RR+W+ DELPTL++L DL +L E+RK+GGC V +QS AQLE IYG+ A +L Sbjct: 407 FERRLWYIIDELPTLNRLRDLDMLLAESRKYGGCAVLALQSPAQLEAIYGQAVAQTLIGN 466 Query: 476 MNTRAFF--RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 T+ F ++P H A A GE+E + + SYGA+ +RDGVS + Q L++ Sbjct: 467 CATKIVFAEQNPLH--AGRLADMFGEQEIREYQKGLSYGANDIRDGVSLNQQTRYQQLIT 524 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSL 560 +DIQ L +V LP P V+L++ Sbjct: 525 KTDIQFLSRNQAFVRLPDNCPIVRLNV 551 >UniRef50_A5CC23 Conjugative transfer protein n=48 Tax=cellular organisms RepID=A5CC23_ORITB Length = 585 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 179/580 (30%), Positives = 295/580 (50%), Gaps = 34/580 (5%) Query: 1 MSF-NAKDMTQGGQIASMRIRMFSQ-IANIMLYCLFI-FFWILVGLVLWIKISWQTFVNG 57 M+F N + T+G Q+ + ++RMF Q AN+ L + FWI+ L +Q Sbjct: 2 MNFQNQGNFTRGSQLFAHKLRMFGQGSANVFTIGLGLSIFWIICRL-------YQKVFLS 54 Query: 58 CIYWWCTTLEGMRDLIKSQPVYEIQYYGKTF---------RMNAAQVLHDKYMI---WCS 105 +Y++ L + Y+I G F +NA LH+ Y + Sbjct: 55 SLYYFAIERYVQLKLTIGEHFYDIDQIGIVFYSLRFKKWIHLNAQDFLHEFYTGQHGFKI 114 Query: 106 EQLWSAFVLAAVV-ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLK 164 +QLW + +A++ L++ I + QGK+ G +++A+MLK Sbjct: 115 QQLWEFLINSALLEGLIVFAIGVIISIVFFTAQGKKTIIKAKIRGADFV-RSRNLAKMLK 173 Query: 165 KDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE 224 K S I G LP++++SE + + GT G GK+ ++ L R + D +I D +G Sbjct: 174 SAKKASKICFGGLPLVKNSERLHILITGTTGTGKTNMLNELLPQIRSQQDRAIIIDLTGA 233 Query: 225 FVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRT 284 F ++D DK+LNPL+ W W +C DF + A++ + D F+ + Sbjct: 234 FTDRFFDSKCDKLLNPLEKNSEQWLPWNDCFEAADFHDIASSFSNYTHRIDDFFAKNAEL 293 Query: 285 IFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 + +EA L ++D + KL+ T++ + RN+ + ++ E +T+ I++ L Sbjct: 294 VLSEALKLYQDD--KDIIKLIHTIIYSDNRQFVKAFRNTAVSGIISESAPETSAGIQSTL 351 Query: 345 TNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 + +++YL+ G F+I++W E GWLFI++ A+L+P+IS W+SI Sbjct: 352 GKNITSLQYLKP----GGNFSIKEWFSNSAE---TGWLFITATPSQRATLQPLISAWISI 404 Query: 405 AIRGLLAMGENR-NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 AI+ L+ N N+ +WF DELP L K+ L L E+RK+GGC+V G+Q+ QLE I Sbjct: 405 AIKALMCRNPNHDNKNIWFILDELPALQKVSSLPVALAESRKYGGCFVAGLQNIHQLEAI 464 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 YG AS+ D+ N++ FR A +A +GE+E ++ E SYG++ +RDGV+ Sbjct: 465 YGSAECASMLDLFNSKFIFRVSDQVTAYKSALTLGEEEIIETQENLSYGSNTMRDGVNMN 524 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 ++ LV S+I +LPDLTCYV L G +P KL++K Q Sbjct: 525 NVERKKLLVMPSEIMNLPDLTCYVKLVGNFPITKLTMKLQ 564 >UniRef50_Q0HXY0 Putative uncharacterized protein n=1 Tax=Shewanella sp. MR-7 RepID=Q0HXY0_SHESR Length = 657 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 183/615 (29%), Positives = 301/615 (48%), Gaps = 17/615 (2%) Query: 14 IASMRIRMFSQIANIMLYCLFIFFWILVGLV-LWIKISWQTFVNGCIYWWCTTLEGMRDL 72 + S ++ +FS I ++ + I+ GL+ LWI N Y W L+G+ Sbjct: 20 LHSQQMLLFS---GIWIFLPGVLLAIVGGLLYLWIDADKCVLQNTSTYLWAQ-LKGLVQP 75 Query: 73 IKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAF--VLAAVVALVICLITFFVV 130 S V + ++ V+++ + +L +F +++ L + + + VV Sbjct: 76 FSSVTVGTCVALDGRESLPSSVVINEPLFQEAAVKLLKSFGWAFSSLFVLYLPIGVYLVV 135 Query: 131 SWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCL 190 + ++GK+ E++ G +L + K +++K G SD+ +GD P+ ++ + Sbjct: 136 KAV--KRGKEIKEDKYIRGAKLVSSEKLKGEIVEKHGA-SDLTLGDFPLPTGFSKKHTLI 192 Query: 191 HGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDL 250 GT GAGKS + L R RGD V+YD+ GEFV+ +Y +D ILNP D+R W Sbjct: 193 SGTTGAGKSTALTHLLKAIRARGDRAVVYDKKGEFVEMFYRDGVDHILNPADSRSHQWTP 252 Query: 251 WKECLTQPDFDNTANTLIPMGTKE--DPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTL 308 W+E ++ D D A TLIP DPF++ S R +F+ + D RS + L+ Sbjct: 253 WEEMVSPFDADWIAETLIPESKSNGGDPFFRDSPRHVFSAVLQKLYLDGFRSLTTLLQAT 312 Query: 309 LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD 368 +E L + +PA E EKT SIR+ L N V +R L+ + G F+IRD Sbjct: 313 AWSDLELLTELVAGTPAETHFSEGNEKTLASIRSTLVNGVLPLRLLKECDSRGF-FSIRD 371 Query: 369 WM-RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDEL 427 W+ +G + + WLF+ KP+IS W+ +GL+A G N +R +W DEL Sbjct: 372 WIAQGDEQGADDSWLFLPVRESEIEIQKPLISTWIQSVAKGLMACGVNNDRTLWIVVDEL 431 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSH 487 P+L K+P L ++ E R FG V GIQ QLE+ +G+ + ++ + +T+ FR + Sbjct: 432 PSLKKIPALSMLMAEGRGFGAAVVLGIQEINQLEEEFGKNTSKTILGLCSTQLHFRLNNA 491 Query: 488 KIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 AE+ + +GE E + E +Y AD +RDGV + + +V S+I LPDL+C+ Sbjct: 492 DTAEWVSKVLGEAEREEVDEDLNYSADDIRDGVRVSSKRQNRKIVLPSEIMDLPDLSCFA 551 Query: 548 TLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV 607 + G ++ + + PK+A FI D N + RL L A A + + F P Sbjct: 552 KIWGVESKARIDIPFLRLPKIADGFIQGDENETVGMRL---LNAARALKMEADTDFAPKE 608 Query: 608 PEVVSGEDVTQAEQP 622 G +V++ + P Sbjct: 609 LSNKHGTEVSKGQLP 623 >UniRef50_Q31SG4 Membrane protein, n=6 Tax=Enterobacteriaceae RepID=Q31SG4_SHIBS Length = 137 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 134/137 (97%), Positives = 134/137 (97%) Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVN 640 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP INDKKSDSGVN Sbjct: 1 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPVINDKKSDSGVN 60 Query: 641 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVN 700 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPD QQMQRREEVN Sbjct: 61 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDTWQQMQRREEVN 120 Query: 701 INVHRERGEDVEPGDDF 717 INVHRERGEDVEPGDDF Sbjct: 121 INVHRERGEDVEPGDDF 137 >UniRef50_A0B526 Type IV secretory pathway VirD4 components-like protein n=3 Tax=Burkholderia RepID=A0B526_BURCH Length = 702 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 157/479 (32%), Positives = 248/479 (51%), Gaps = 14/479 (2%) Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 D++ I+ +A + A + A+ + ++ V+ W+ +GK ++ +V G + + K Sbjct: 106 DEFFIYAR----NAALYAVLTAIAVTFLS--VLFWMEYGRGKL-TDKQVRGAKLV--KAK 156 Query: 158 DVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVV 217 ++ + L+ S RI +P+ + +E+ G G+GKS+ L + R R + Sbjct: 157 ELIKELEARDDASPYRIAGVPMRKKAEVLGTLFSGAQGSGKSQQFFALMDQVRARKKRAI 216 Query: 218 IYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDP 276 +YD SGEF +YY D ILNPLDAR W+ W+E ++ +D A LIP+ DP Sbjct: 217 VYDPSGEFTAAYYREGKDVILNPLDARSPNWNAWREIQSEIHYDGLAEGLIPIPPNVADP 276 Query: 277 FWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKT 336 F+ +GR +F A + D R+ + L + +E+L L N AA V+ E+T Sbjct: 277 FFAIAGRMVFKGAIRALGGDNKRTNAALYKAIAHSNLEELHAILANESAATYVDPVTERT 336 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 +S++ + N + RYL GEPF+IR+W++ ED + WLFI+ N + +L P Sbjct: 337 GMSLKMTVQNQLDCFRYLH---DEGEPFSIREWIQNEDEDD-DSWLFITVNEEQKTALLP 392 Query: 397 VISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 +IS+W IAIR LL + R+W+F DELPTL KL + + RK+GGC+V GIQ Sbjct: 393 LISLWCDIAIRSLLTLKPIHRERLWYFYDELPTLQKLEIMKLAVTNIRKYGGCFVLGIQD 452 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV 516 ++QL IYGE A ++ T+ R A+ A IG+ + + E + G D Sbjct: 453 FSQLFQIYGEHLARTIISGCQTKLLLRVTDGDAAKALANAIGQADLDEKEESLNLGIDER 512 Query: 517 RDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 RDG+S + LV S+I LPD+ Y+ P YP ++ +Y P+ FIPR Sbjct: 513 RDGMSVFARRNLRDLVLSSEILHLPDMQGYLVTPSDYPVARVKYEYVPHPQTVTPFIPR 571 >UniRef50_A1WDH0 TraD n=3 Tax=Burkholderiales RepID=A1WDH0_ACISJ Length = 665 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 169/572 (29%), Positives = 280/572 (48%), Gaps = 33/572 (5%) Query: 22 FSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTT-----------LEGMR 70 FS+ A + ++ +F + + V+ I I V +W TT L R Sbjct: 13 FSRGAELWMHQARLFV-VAIWTVVLISILAGLAVTTAYFWNATTADEKYALERNVLAHTR 71 Query: 71 D-LIKSQPVYEIQYYGKTFRMNAAQV--LHDKYMIWCSEQLWSAFVLAAVVALVICLITF 127 D L + E+ G+ +M ++V L D+ +E W + L+ + Sbjct: 72 DALYMTAGKMELNVNGELRKMEVSEVALLTDE----MAEDAWRKLRNGGMFGLLTSIGVV 127 Query: 128 FVVS---WILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE 184 F++S W GR+ Q +N++ G + + K++AR+++ + S I +P+ SE Sbjct: 128 FLISLYWWGYGRERMQ--DNQLRGAKLV--EGKELARLIRHRDEASPYEIAGVPMRVKSE 183 Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDAR 244 + G G GKS+ L R RG +++YD +GEF +++Y D ++NPLD+R Sbjct: 184 TLHTLFAGAQGTGKSQQFFALMKQVRARGKRMIVYDPTGEFTQAFYREGKDILMNPLDSR 243 Query: 245 CAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKL 304 W++W E FDN AN LIP + DPFW +GR + + ++ + R+ L Sbjct: 244 SPNWNIWNEIAKDYHFDNMANGLIPDPAESDPFWALAGRMVLKDVIAVLGREGRRTNRDL 303 Query: 305 VDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPF 364 + + ++ + L+ + A V+ E+T +S++ + N ++A R+L GE F Sbjct: 304 YNAIAKSNLDAMHALLQGTAGATYVDPTTERTGMSLKMTVQNQLEAFRFL---PDEGESF 360 Query: 365 TIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFC 424 +IR W+ ++ + W+FI++ +LKPV+S+W+ AI+ +L + R+WF Sbjct: 361 SIRKWV----HEEGDSWMFITAREAMREALKPVLSLWIDTAIKAVLDLEPIHRERLWFCI 416 Query: 425 DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS 484 DELPTL KL L L RK+G C V G+Q ++QL +IYG A ++ T+ R Sbjct: 417 DELPTLQKLDILKLALTNTRKYGLCMVLGVQDFSQLYEIYGHDLAKTIISGCQTKLLLRV 476 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 A+ A +G+ E + E SYG RDGVS + + LV S+I +LPD+T Sbjct: 477 TDGAAAKLLAELMGQAEVDEKDETLSYGLSSQRDGVSVMARRQMRDLVLTSEILTLPDMT 536 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD 576 Y+ +PG YP ++ Y K A FI RD Sbjct: 537 GYLLVPGDYPIARVKYGYVPTEKQANGFIERD 568 >UniRef50_A3VMZ9 TraD n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VMZ9_9PROT Length = 679 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 134/403 (33%), Positives = 223/403 (55%), Gaps = 6/403 (1%) Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 + +P SE+Q+ + GT+G+GK++ I L + R+ GD V++D +G F+ +Y Sbjct: 187 LAGIPYPVGSEVQHTGISGTIGSGKTQAIAALLDQIRKAGDRAVVFDLTGGFIAPFYRED 246 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 D ILNPLD R AW ++ E T+ FD A +IP K DP W S R +F+ A L+ Sbjct: 247 RDTILNPLDRRAPAWSVFDEAKTKAGFDAIAAAMIPRAQKADPVWADSARMVFSTAGQLL 306 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 D S +LVD LL+ ++ L + +PAA+++ + S+R +L+ Y+ +R Sbjct: 307 LGDGRASNKELVDLLLNAELRTLAPFFAGTPAASIISADTPRMTNSVRMMLSTYLDGLRL 366 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 L G+ F+I +W + D+ LF+SS AD H +L+P++++W+ A+R L++ Sbjct: 367 L---PSRGDRFSITEW---IENDRAGSTLFLSSRADMHETLRPLLTVWMDTAVRALMSRP 420 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 + NRR+WF DE+ L +LP +++ L R+FG +V GIQ+ +QL DIYG A +L Sbjct: 421 RDPNRRIWFIMDEVAALQELPSIMDGLARGRQFGAAFVLGIQAQSQLRDIYGPDGAQTLS 480 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 V T+ + A++ A +G +E +++E S+GA+ +RDGV + + LV Sbjct: 481 SVCRTKLILAASDADTAKWYADFLGRQETSRSNENVSFGANTIRDGVMLARQERIEHLVI 540 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD 576 +I +L L Y+ +P +P K+ + R P F+PR+ Sbjct: 541 PEEIMNLRSLEGYLKMPEGFPLAKVKVPLVLREDREPAFLPRE 583 >UniRef50_Q1NH25 TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25_9SPHN Length = 668 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 178/639 (27%), Positives = 314/639 (49%), Gaps = 34/639 (5%) Query: 9 TQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKIS-WQTFVNGCIYWWCTTLE 67 T+GGQ +RM +Q+ F +L G+ +W+ + W N Y ++ Sbjct: 13 TRGGQAIVHNVRMTTQV---------FFQTLLAGIAVWVGGTIWYVLENSTDYQRFVAVK 63 Query: 68 GMRDLIKSQ-----PVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVI 122 + +KS PV G+ + + +L + + + V A +A Sbjct: 64 IVEATLKSDVPGGAPVLFRTPSGRQYWTTSDALLGSRIAKKTLQAMEHHLVYGAALAGAF 123 Query: 123 CLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRD 182 L+ + R G+ N+ G + + + R+L + ++ IG +P+ Sbjct: 124 ALLMLAWAWFYFTRTGRGLGSNQFLRGARF-GTARQLRRLLWRS-RNGSFAIGGVPVPDA 181 Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 E ++ + G G GK+ +I ++ + R++G ++YD +G FV+ +Y P+ D +LNPLD Sbjct: 182 FEPEHILICGAPGTGKTNIIVKMLDGMRKQGKRAIVYDTAGTFVEKFYRPNHDILLNPLD 241 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGR-TIFAEAAYLMRNDPNRSY 301 AR W W + +D A + IP DPFW + R T+ A L R++ Sbjct: 242 ARADCWSPWVDVPRDYHYDQIAESTIPE-KGGDPFWAKAARGTLVAVLRKLARHE-RTLI 299 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 S L++T+L ++ L ++ + AA + + ++T+ IRA L + +++ YL + Sbjct: 300 SVLLETVLRTPLKTLASFAEGTDAAAFISMEGDRTSAGIRAELASVMRSFSYL---DDTA 356 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 + F+IRDW V ++ + WLFI+ AD SL+P++++WL IAI ++++ +R RR++ Sbjct: 357 DGFSIRDW---VANEEDDSWLFITVKADQLPSLRPLVTVWLDIAISAIMSLPPDRKRRLY 413 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 DELPTL KLP L + L ARK+GGC + G QSY QLE YG + AA++ +T Sbjct: 414 CVIDELPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCSTWVA 473 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 R+ A+ + +G+ E ++A+E SYG + +RDGV+ + + LV ++++ +LP Sbjct: 474 LRANDTPTAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRTQVTRPLVMHTEVTNLP 533 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI-----PRDINPEMENRLSAVLAAREAEG 596 +L ++ P V+ + +Y P F+ P ++PE E ++ + + Sbjct: 534 NLAGFLRFGRNLPVVRFTDRYNVLPSPQAAFVERLVPPVRLDPEAEGESASKPSGSPPKR 593 Query: 597 RQMASLFEPDVP-EVVSGEDVTQAE-QPQQPVS-PAIND 632 R+ + P++P EV Q E PQ P S PA D Sbjct: 594 RRPKKMEAPELPLEVDDSRSPAQDEVSPQGPSSGPAEGD 632 >UniRef50_C9CRW4 TraG n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRW4_9RHOB Length = 758 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 150/507 (29%), Positives = 255/507 (50%), Gaps = 21/507 (4%) Query: 85 GKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN 144 G+ +A Q+ D+ + ++ +L + + + F VV I G+ E Sbjct: 64 GRRVERSAGQIYADREIAEIYDEYADNALLFMYYSFIPAALAFAVVFGIFAMVGRNLQEE 123 Query: 145 EVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD------------LPIIRDSEIQNFCLHG 192 E G +L K++ K+ ++ + R G + +S + G Sbjct: 124 EYIRGARLV-TAKELKAWSKRKWREYEKRFGKGSKKGPRYTLAGIEFPPNSVEAQIGITG 182 Query: 193 TVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWK 252 TVG GK+ + L N R+ G +IYDR G ++ +YDP D ILNP D R W + Sbjct: 183 TVGVGKTNAMHELLNTIREAGGRAIIYDRMGGLLRDHYDPEKDIILNPFDERSVGWSPFN 242 Query: 253 ECLTQPDFDNTANTLIPMGTKE-DPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSI 311 E ++ F A +IP D FW + R +F A + ++S L +++I Sbjct: 243 EVVSPEGFAQIAEVMIPDHPGSLDSFWTQAARLVFQYTARELAKKGHKSNDALRKAIMNI 302 Query: 312 KIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR 371 E+L + +P A+ E + KT+ SIRA N + +R+L+ + + EPF+IRDW+ Sbjct: 303 PSEELAEIVAPTPGAHFFGEHVAKTSGSIRA---NMITELRFLEYLRDDAEPFSIRDWVV 359 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLH 431 + + G++F++ NA+ A+++ ++S +A L+ E+R+ ++WFF DE+PTL+ Sbjct: 360 ----NDRPGFVFLTGNAEQSAAVRNIVSTVFEVAANALMTTEESRDPKIWFFLDEVPTLN 415 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 KLP L + L E R+FGG +V G Q ++QLEDIYG+KAA ++ V+N R F +P + A+ Sbjct: 416 KLPFLPKSLAEIRQFGGAFVVGYQVFSQLEDIYGDKAAETISGVLNNRVVFNTPDYNTAQ 475 Query: 492 FAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 ++ +GE++ ++ E + GA RDGV ++ +V+ ++IQSLP Y Sbjct: 476 RSSRSLGEEDVIEQQENITLGAHDTRDGVGIVGRRTQRAIVTPAEIQSLPQFVAYFRPAY 535 Query: 552 PYPAVKLSLKYQTRPKVAPEFIPRDIN 578 P K+ + A +FIP + N Sbjct: 536 DAPTAKVIFEPVPTTATAAKFIPYNGN 562 >UniRef50_D0SGZ6 Type IV secretory pathway protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGZ6_ACIJO Length = 657 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 162/585 (27%), Positives = 289/585 (49%), Gaps = 25/585 (4%) Query: 41 VGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYY----GKTFRMNAAQVL 96 +GL L++K+ N Y T LE + P EI+ + + + A+ + Sbjct: 1 MGLFLYLKVD-----NTQFYAIKTELEIAYKSTLNVPNKEIELFINGVPEKVSIKEAEQI 55 Query: 97 HDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNP 156 + Y+ W A A ++ L++ + + W G+ E+E G +L + Sbjct: 56 IEPYL----SSFWWAVERALLIGLILSISIVGGLIWYWYNYGRDVMEDEQLRGAKLVEKE 111 Query: 157 KDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV 216 K + +L + + + I +PI + +E N C G +GKS+ IR L R RG Sbjct: 112 K-LIELLNQRDEANHYTIAGVPIRKGTEGNNICCVGAPQSGKSQAIRALLAQIRARGKKA 170 Query: 217 VIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP 276 V+YD SGEF + ++ D ILNP D RC W +W E D+ + LIP+ D Sbjct: 171 VVYDPSGEFTQEFFREGKDIILNPFDERCPQWSVWNEVEEDHHIDSIGDGLIPITPTGDQ 230 Query: 277 FWQGSGRTIFAEAAYLM-RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEK 335 F+ + R + ++ ++ +N+ ++ +L +++ +++L L + A V+ K EK Sbjct: 231 FFPPAARRLISDVIRVLGQNEATKTNKRLFESISLSTLQELHEMLAGTSGATYVDPKTEK 290 Query: 336 TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 T I+I+ + NY+ R+L+ GE F+IR+W+R ++ + W+FI++ + ++K Sbjct: 291 TGINIKMQILNYLTPFRFLK---DEGEKFSIREWVR----EEDDSWVFITTKEEQKEAIK 343 Query: 396 PVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 P+IS+W+S I+ +++ R+W DE+PTL K+ DLV L RK+G C++ G+Q Sbjct: 344 PIISLWISTVIKATMSLPAIHKERMWLCIDEMPTLQKMDDLVLSLTNTRKYGLCHLIGLQ 403 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 ++Q YG+ ++++ + T+ R AE + IG+ E + + S G Sbjct: 404 DFSQSVHTYGKDVSSTIISTLQTKLILRVTDSDSAEKLSKIIGQMEVDEKNMSRSMGVTD 463 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 RDG S + + +V ++I +LP+L Y+ + G YP K+ +Y K + FI R Sbjct: 464 GRDGDSFYGQRKERNVVMAAEIMNLPNLVGYLKIVGDYPVTKVITEYVPHTKNSEPFIAR 523 Query: 576 D--INPEMENRLSAV-LAAREAEGRQMASLFEPDVPEVVSGEDVT 617 N E+ + L+ V LA EA+ +Q S + E + E++T Sbjct: 524 KKAYNEEVVSELTNVNLAQEEADRKQKESAIVQNTEEKLEDENLT 568 >UniRef50_Q3HKI7 TraG n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3HKI7_RHOS4 Length = 760 Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 164/585 (28%), Positives = 283/585 (48%), Gaps = 33/585 (5%) Query: 8 MTQGGQIASMRIRMFSQIANIMLY-CLFIFFWILVGLVLW---IKISWQTFVNGCIYWWC 63 +GGQ RM +Q+ L+ L F LVL ++ +TF + ++ Sbjct: 12 FVRGGQTTQHWWRMAAQVVRTSLFVALAAFTLTYTALVLANYELRYMRETFASWTAHY-- 69 Query: 64 TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC 123 +R + + + + + A Q+ D M +++ L A ALV Sbjct: 70 ----NVRLGRPEKIISYVDHLDRRLERTAGQIAADHRMNALADEYRRNASLFAWYALVPA 125 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG-------- 175 + + I G++ +NE G +L D +D+AR + K R G Sbjct: 126 AAALLISTAIFAWAGQRVGQNEHVRGSRLIDQ-RDLARWSMRKWKAYQKRFGLGLKKGPR 184 Query: 176 ----DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 +P ++ + GTVG GK+ I+ L R + +IYDR G V+ +YD Sbjct: 185 YTIAGIPFPPNAVEAQTGIFGTVGVGKTNAIKELLTTIRAQNGRAIIYDRMGGLVRDFYD 244 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGT-KEDPFWQGSGRTIFAEAA 290 P+ D I+NP DAR W + E T A +IP + DPFW + R +F +A Sbjct: 245 PATDIIINPFDARSHIWSPFGEASTPEALAQIAEVMIPQRPGQNDPFWSQTARLVFEYSA 304 Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 + + + L +++I E+L L +P A+ + +EKT+ SIRA N + Sbjct: 305 RSLLRAKRPTNADLRRAIMTISAEELEKLLAGTPGAHFFGKHVEKTSASIRA---NMIAE 361 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 +R+L+ + +GE F+ R+W++ ++ G++F++ +A+ A+ + +IS + ++ L+ Sbjct: 362 LRFLEFLRDDGELFSAREWVK----SERPGFVFLTGDAEHSAATRNIISTIIEVSANALM 417 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 E+R+ +VWFF DE+P+L++LP L L E R+FGG +V G Q +AQLEDIYGEK A Sbjct: 418 TCEESRDPKVWFFLDEVPSLNRLPFLQSKLAEIRQFGGAFVLGYQVFAQLEDIYGEKGAQ 477 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 ++ +N R F +P + A+ + +G ++ ++ E S+GA RDGV+ + Sbjct: 478 AIAGNLNNRIVFNTPDARTAKLFSESLGFEDVVEQRENLSFGAHESRDGVAFMSQRTERP 537 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK-YQTRPKVAPEFIP 574 +V+ S+IQ+LP + P ++ + Q PK A + +P Sbjct: 538 IVTASEIQALPQFEALIRFAYDAPTARVRFEPVQVEPK-AEKIVP 581 >UniRef50_B0RKL6 TraD n=2 Tax=Yersinia RepID=B0RKL6_YEREN Length = 690 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 179/682 (26%), Positives = 308/682 (45%), Gaps = 33/682 (4%) Query: 7 DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLV-LWIKISWQTFVNGCIYWWCTT 65 ++T+GGQ + +RM QI + Y + ++G V + +S +T + + + Sbjct: 13 ELTRGGQTLTHFLRMLYQI--LSRYIKIVLLAYVIGSVGIGYFLSSETDLKMGSQYAISA 70 Query: 66 LEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVI-CL 124 L K+ I GK+ + Q++ M E + L A+ +L + L Sbjct: 71 FRVEYLLDKNVKTQLILPSGKSVTVTHGQIVSSPTMKNHFEIIKGKIYLGAIASLFLSAL 130 Query: 125 ITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARM---LKKDGKDSDIRIGDLPIIR 181 + F+ + L ++GK +++E G + + + ++ + LK S + ++P++ Sbjct: 131 VAVFLFRY-LRKRGKNDAKDEHIRGAAIGNKEELISAVKEKLKTAHLPSRYSLNNVPLLP 189 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPL 241 E + L G+ G GKS VIR + R D VIYD SGEF K +Y D ILNP Sbjct: 190 AQECTSILLAGSPGVGKSTVIRDILRQGRIHNDKAVIYDISGEFTKRFYRKGFDVILNPF 249 Query: 242 DARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS- 300 D R +W LW E + ++ + IP K DPFW + + +F+ +M NRS Sbjct: 250 DKRTHSWTLWNEGRNEIAYNRLSQAAIPPVDKGDPFWSMAPQLVFSS---IMDELGNRSE 306 Query: 301 ---YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 + L++ +L + +KL + + A + +EK A S+RAV+T Y + ++YL + Sbjct: 307 TPSHEHLMNIILRMSDDKLAQVVAHQDARTVFNLDVEKMAGSLRAVITAYTRNLKYLSHM 366 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 G F+ RDW R ED + W+F++ D ++ ++MW+ A +L++ + Sbjct: 367 --TGPQFSFRDWARN--EDDRR-WVFLTVRDDLKVTMMSALTMWIESACSAILSLEPSDV 421 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RR+ DE+PTLH +P L++ RKFG + G QS +QL + YGE +L D Sbjct: 422 RRILCAFDEIPTLHPIPSLLDFSGTGRKFGAVPILGFQSNSQLLEKYGEHRTKTLTDAAG 481 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 F A + A ++G E +A+E +S GA VRD + + + + L+ YS I Sbjct: 482 VFMGFSIKGSDGASWIAKQLGNSEIEEATENFSIGAADVRDTTNVNRTTQERELLLYSQI 541 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD------------INPEMENRL 585 Q L DL C + + P KL K+ P +A D I E + + Sbjct: 542 QGLEDLHCLIRMGNGLPVTKLEYKHDNMPTIANAIEETDIFKAQTFQTEFHIEKETDAKS 601 Query: 586 SAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGG 645 + + A+ + L + + + + +Q S + + N P Sbjct: 602 TVEGVIKHAKANNINDLLSWEAHKAIKEKQDAARKQATTGNSSTTDSDSENKPFNSPQNK 661 Query: 646 IEQELKMKPEEEMEQQLPPGIS 667 IE+ + K EE+ + P I+ Sbjct: 662 IEEAIS-KAAEEVNKNASPSIT 682 >UniRef50_C4Z014 Putative conjugative transfer protein TraD n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z014_9RICK Length = 659 Score = 241 bits (615), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 181/657 (27%), Positives = 305/657 (46%), Gaps = 50/657 (7%) Query: 7 DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIK------ISWQTFVNGCI- 59 D T+GGQI ++RMF Q+ + + F+ +LV + + + +T++ Sbjct: 4 DYTRGGQIFIHKVRMFRQVIGVSSFWSFVIAALLVIFLTMPQYKAINMFAAKTYMRASFI 63 Query: 60 -YWWCTTLEGMRDLIKSQP---VYEIQYYGKTFRMNAAQVLH-----DKYMIWCSEQLWS 110 + W T + D + +P +Y++ + + A +L+ YMI L Sbjct: 64 DFVWDITPKISEDSKQREPRIDIYDMSIDRASRSVKVATILNTPKYKQSYMI-----LKH 118 Query: 111 AFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS 170 V A++A + F+V + + GK + G + +V + LKK Sbjct: 119 YIVSTALLAAGSTVFLVFLVFVVWSKFGKTARATKHISGSTI-KTASEVKKYLKKHNLIG 177 Query: 171 DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY 230 IGD+P+I+++E ++F + G+ G+GK+ +I L R ++ D++GE ++ YY Sbjct: 178 MFYIGDMPLIKNTETRHFLVTGSTGSGKTNLINTLLPQVRTAKHPAIVVDQTGEMIERYY 237 Query: 231 DPSI-DKILNPLDARCAAWDLWKECLTQ-------PDFDNTANTLIPM-----GTKEDPF 277 DPS D I NPLDAR +WD W++ + P + A L G+ D F Sbjct: 238 DPSRGDIIFNPLDARSHSWDFWQDATSNVAIGEVDPRLEKFAKVLFSFDKRSTGSGNDQF 297 Query: 278 WQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTA 337 WQ S +F + R+ + L L + + L + L+ + AA ++ TA Sbjct: 298 WQNSSEILFISCVESLIKKDCRTITSLKKILTKVNRQDLASLLQGTRAARYFSKQNTTTA 357 Query: 338 ISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPV 397 SI +V+T V+ I LQ + + F+++ + + E N WLF++S+ P+ Sbjct: 358 ESILSVMTTGVRPICLLQD---SKQQFSLKQYFYNI-EKGSNSWLFLASSPSQREVTLPL 413 Query: 398 ISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSY 457 ++ L +A+ L+ G N RR+WF DEL +L +L L +L E+RK+GGC + QS Sbjct: 414 LACILELAVSYLIESGINEQRRMWFVIDELASLGRLNSLSSLLAESRKYGGCVMAATQSL 473 Query: 458 AQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVR 517 QL D YG A ++LFD T+ FRS A G E+ + SYGA R Sbjct: 474 NQLFDKYGHYAGSTLFDQFATKFMFRSTDPSTARLITDIFGNVEYASQQKNTSYGAHEHR 533 Query: 518 DGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAV-KLSLKYQTRPKVAPEFIPRD 576 DGVS + +R++L++ +DI SL DL C+V LP P + KL L ++P Sbjct: 534 DGVSYTEQEKRKSLITTNDIASLKDLECFVGLPDPQIRITKLQLSPAQVEHKNKGYVPLS 593 Query: 577 INPE--MENRLSAVLAAR--EAEGRQMASL------FEPDVPEVVSGEDVTQAEQPQ 623 ++ E +E L + + + + Q+ S+ D+ E+ E + E Q Sbjct: 594 LSEEAALEQALKEKVQSHDVDTDNTQLGSMASTGHDINDDINEISDAESEAELEHTQ 650 >UniRef50_A4XE63 Type IV secretory pathway VirD4 components-like protein n=5 Tax=Sphingomonadaceae RepID=A4XE63_NOVAD Length = 776 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/451 (32%), Positives = 232/451 (51%), Gaps = 14/451 (3%) Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 SE + + G+ G GK+ +R + R R D V++D +G +V+++Y+P D ILNP+D Sbjct: 237 SEQAHTIMIGSTGTGKTTQMRDMIAQMRVRQDRAVVFDLTGAYVEAFYNPETDTILNPMD 296 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPM-GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY 301 RC +W L+ E DF A+ ++P G DPFW RT+F + + + Sbjct: 297 ERCPSWSLFDEGKNYADFTAIASAILPTDGGGSDPFWMLGARTLFVQTCVQLMKLGQATN 356 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 + L L+ +E++ LRN+ A L + A S+RAVL +A+ + I Sbjct: 357 AALAYRLMMADLEEVHELLRNTIAEPLTAPVAARMAESVRAVLNTNAQALLF---IPEGK 413 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 EPF+I DW+R +D+ LFI+S+ + + ++S+W+++A+ L+ + R+ R W Sbjct: 414 EPFSICDWIR--HQDKPGSILFITSSHNELVLNRALLSLWMNLAVHTLMRLPRTRSLRTW 471 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 FF DE+ LH+LP + + L AR FGG +V GI S+A+L + YG++ A +L + T+ Sbjct: 472 FFFDEVHALHRLPAIEDGLQTARGFGGAFVLGIHSFAKLAETYGKEGAQNLASLARTKLI 531 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 + AE + IG +E E YSYG +RD + E Q LV DI LP Sbjct: 532 LAAADRDTAEHCSDYIGHREVRMMDEAYSYGYSNIRDAATITPRSEVQPLVIPDDIMRLP 591 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR-DINP-EMENRLSAVLAAREAEGRQM 599 L ++ P + A ++ L Y+ PKVA +I R ++ P E + E GR Sbjct: 592 SLRGFLVFPEGFDAARIRLTYKDYPKVAEGYILRENVEPIEFISMPKGDDEVAETGGRDR 651 Query: 600 ASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI 630 + EP++ GED+ P P+SPA+ Sbjct: 652 SG--EPELEP--RGEDL--GRDPAVPLSPAL 676 >UniRef50_Q1N8W8 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8W8_9SPHN Length = 762 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 133/446 (29%), Positives = 227/446 (50%), Gaps = 8/446 (1%) Query: 136 RQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVG 195 RQ + E E R K R ++G + LP +E+ + G+ G Sbjct: 189 RQAFVEWEREDPANRTAAKWAKMSNRERHQEGVHFPYLLAGLPYPYKTEMAHTMFIGSTG 248 Query: 196 AGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECL 255 +GK+ + + +++RG+ V++D +G++V+ +Y+P D ILNP D RC +W ++ +C Sbjct: 249 SGKTVQMLTMIEQSKKRGNKAVVFDLTGQYVERFYNPETDIILNPFDVRCPSWTIFNDCP 308 Query: 256 TQPDFDNTANTLIPM-GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIE 314 + AN L+P G +PFW + RT+F E +R++ + + L++ ++ Sbjct: 309 GYVEMTAAANALVPSDGGTGEPFWVQAARTLFVEMCEKLRSEGRTTNRDIARRLMTADLK 368 Query: 315 KLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVR 374 + LRN+ A+ + + + A SIR+ +A+R+L G+ F+I +W+ Sbjct: 369 TIHESLRNTIASPITSTEAARMAESIRSTFVTNAQALRFLPDA---GKRFSITEWLAS-- 423 Query: 375 EDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLP 434 D LFISS + ++++WL IA++ LL M R R WFF DE+ LH+LP Sbjct: 424 -DVPGSTLFISSTYSDLQLTRQLLTLWLDIAVQRLLIMPRTRQLRSWFFFDEIHALHRLP 482 Query: 435 DLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAA 494 + L AR +GG +V G+ S+ +L + YGEK+A +L + T+ + AE + Sbjct: 483 AIENGLQTARGYGGAFVLGLHSFDKLAETYGEKSANTLAALARTKLILTTADTTTAETCS 542 Query: 495 GEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP 554 IG +E + E YSYG +RDG + + + LV D+ +LP L+ YV +P Sbjct: 543 AFIGSREVRQMDEGYSYGISKMRDGSTVTPTTKVEPLVLPDDLMNLPSLSGYVKFAEGFP 602 Query: 555 AVKLSLKYQTRPKVAPEFIPR-DINP 579 A ++S ++ P AP F+ R +I P Sbjct: 603 AARISYPFKDWPVQAPGFLRRQNIRP 628 >UniRef50_Q2G6A0 Type IV secretory pathway VirD4 components-like protein n=7 Tax=Sphingomonadales RepID=Q2G6A0_NOVAD Length = 798 Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 164/608 (26%), Positives = 268/608 (44%), Gaps = 40/608 (6%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 M N + T+G Q+ + FS + L I +++ W IS + Sbjct: 1 MKRNLVNFTRGSQL----LGHFSFMFAAGLKGPLIVAALVISWTSWWTISAGLTDHEVYL 56 Query: 61 WWC---TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAV 117 W + G + ++ + +G T + AQ+ ++ E+L + A Sbjct: 57 VWMRIYAAIYGFMEFDAAKRITLETAFGATIQFPIAQLESYPPVVHAWEKLTALLTSALW 116 Query: 118 VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV----ARMLKKDGKDSDIR 173 + + + F V W R G + E + G L P+ V A ++ ++ D Sbjct: 117 RSGFLLVPVFAVFYWFAERFGGRSKERKHERGAMLVTLPELVDELTAHNRRERTRELDSA 176 Query: 174 IG-----DLP-------IIRDSEIQNFC-----------LHGTVGAGKSEVIRRLANYAR 210 +G LP R S I L GT G GK+ I + AR Sbjct: 177 LGWKWRLSLPREIARVFPYRPSHIATVSYPWRLEQSHAMLIGTTGMGKTVAISDMIAEAR 236 Query: 211 QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM 270 +G V++D +G F++ ++ D ILNPLDARC W L+ EC ++ +F A+ L+P Sbjct: 237 AKGQRCVVFDLTGAFIEHFHAAHCDIILNPLDARCPQWSLFDECRSEGEFWAAADALVPH 296 Query: 271 -GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV 329 G E FW + R +F E + + + L L++ + ++ +R + A L Sbjct: 297 DGGGEAQFWVIAARALFVEFCLKLVAEGRATNDALARELMTADLSRVHAMMRGTIADPLT 356 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR-GVREDQKNG-WLFISSN 387 + + A SIRAV KA++ L G F++R W+ G G LFIS+ Sbjct: 357 APEAARMAESIRAVFNVNAKALKLLPTA---GPRFSVRQWIEDGADSATSEGSILFISAR 413 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + ++++WL A+ L+ M R+ + WFF DEL LH+LP L + L AR FG Sbjct: 414 YVDMSVCAQLLTLWLDTAMNTLMTMPRTRDLKCWFFVDELGALHRLPALEKGLQTARNFG 473 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 G V G+ +YA+L+++YGE A +L + T+ + + A + + IG ++ E Sbjct: 474 GAIVLGLHAYAKLKEVYGENMAMTLASLARTKLILGTADRETATWCSDFIGHRQVRDMEE 533 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 Y+YG + RD VS + L+ + +LP L+ Y+ P +PA + LK RPK Sbjct: 534 GYTYGYNNARDAVSLTPRKHIEPLLLPDQLMNLPRLSGYIKFPDGFPAAPIKLKPVDRPK 593 Query: 568 VAPEFIPR 575 A FI R Sbjct: 594 RAETFIAR 601 >UniRef50_Q2QCR0 TraJ n=1 Tax=Pseudomonas sp. CT14 RepID=Q2QCR0_9PSED Length = 512 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 138/439 (31%), Positives = 217/439 (49%), Gaps = 35/439 (7%) Query: 149 GRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANY 208 G QL +++ R+ K+ K+ I I +P+ +E +F + G G GKS + R + Sbjct: 91 GSQLVSQ-RELKRLTKE--KEEQITIAGVPVPIAAEATHFSVGGATGTGKSTIFREMMYG 147 Query: 209 ARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI 268 QR D +VI D GEF+ ++Y DKILNP DAR W+ + E + DF+ A ++I Sbjct: 148 CMQRKDRMVILDPDGEFLSTFYRKG-DKILNPYDARTEGWNFYNEIRSHYDFERYAKSII 206 Query: 269 PMGTKEDPF-WQGSGRTIFAEAAYLMRNDP-NRSYSKLVDTLLSIKIEKLRTYLRNSPAA 326 + D W GR +FAE A + N N ++ E L+ +++ + A Sbjct: 207 QVSDSNDSEEWNQYGRLLFAEVAKKLYNTTRNPGMREVFRWTNECDSETLQAFVKGTRAV 266 Query: 327 NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP---FTIRDWMRGVREDQKNGWLF 383 +L E E+ S+R VL+N + A H P F++R W ED G LF Sbjct: 267 SLFTEN-ERATGSVRFVLSNKLPA--------HFDMPPGNFSLRQWC----EDPNGGNLF 313 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEA 443 I+ + + +L+P+IS W+ +L M N RR+W F DEL +L +LP L ++L Sbjct: 314 ITWDENMREALRPLISCWVDTIFTSILGMKSNPKRRIWTFLDELESLQRLPTLGDMLTRG 373 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI----AEFAAGEIGE 499 RK GGC V G QSY QLE +YGEK A ++ + N R ++ AE + + E Sbjct: 374 RKKGGCVVSGYQSYTQLESVYGEKLAETM--LANHRTMVALAVGRMGTATAERMSKALSE 431 Query: 500 KEHLKASEQYS--YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVK 557 E L+ E S +G R S +D++ + +V S+I +L +L +++ PG P + Sbjct: 432 HEVLRTKEGRSSRWGDWGTR---SENEDVKPERIVMSSEIMALNNLEGFLSFPGSIPIAR 488 Query: 558 LSLK--YQTRPKVAPEFIP 574 +++ TR P +P Sbjct: 489 VTIDPINFTRTNPVPGIVP 507 >UniRef50_A5G187 Type IV secretory pathway VirD4 components-like protein n=3 Tax=Alphaproteobacteria RepID=A5G187_ACICJ Length = 616 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 130/475 (27%), Positives = 227/475 (47%), Gaps = 19/475 (4%) Query: 135 GRQGKQQ----SENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCL 190 GR+ +Q ++ V G + +T+ ++AR+ ++ G + + E ++ + Sbjct: 131 GRRRRQMEAILADRVVRGTKLVTE--AELARLNANHATKPLLKFGSVTLPSQLENRHIAI 188 Query: 191 HGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI-DKILNPLDARCAAWD 249 GT G GK+ V+R+ + RG+ ++YD SGEF+ +YY+P+ D ILNP D R W Sbjct: 189 IGTTGVGKTTVLRQQLDVIEARGEAALVYDTSGEFLANYYNPARGDIILNPFDQRGVFWS 248 Query: 250 LWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTL 308 + E + D D + LI G ++ W + R + A + + + L++ L Sbjct: 249 PFAEIIHPADCDRISRYLITETGDEDKDIWLETSRNLVANMIRNLWREGRGTLEALLNAL 308 Query: 309 LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE-PFTIR 367 ++ ++L +L N+ +A E+ E+ S+ +L V + +L+ +GE F+I Sbjct: 309 QAMPRQELERWLANTSSARTFEKDAERATASVLFMLVKAVNMLMFLRKAPRDGELAFSIS 368 Query: 368 DWMRGVREDQ-KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDE 426 + + + +++ + W+F+ D S+KP++++WL A +L + + +RVWF DE Sbjct: 369 SFFKHIGQNKGRKPWIFVPRKEDYFESMKPLMALWLECAASAMLGLSTSPTQRVWFLLDE 428 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPS 486 L L ++ +L +LP+ RKFG C V QS Q+ YG A +L NT+ F + Sbjct: 429 LADLPRVQNLERLLPQGRKFGACAVLSFQSIGQMRARYGHDGAEALLGCCNTKLFLQMSD 488 Query: 487 HKIAEFAAGEIG--EKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 H E+AA IG E E +E ++ +T + E + V SD++ LP T Sbjct: 489 HASREWAAANIGKVEVEIPLMTETVDPETGKLQQSFTTAR--ETRPAVIESDLR-LPKHT 545 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAP----EFIPRDINPEMENRLSAVLAAREAE 595 Y+ LP P ++ L P +FIP DI L A+ AE Sbjct: 546 GYLMLPDGLPVARIKLTNDHIVARGPARQLDFIPADIAEAFWGVLQEAQKAKTAE 600 >UniRef50_C5SIG6 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIG6_9CAUL Length = 871 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 145/546 (26%), Positives = 255/546 (46%), Gaps = 34/546 (6%) Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSID 235 +LPI +S Q+ + G+ G+GKS+ I L R + +IYD E+++++Y D Sbjct: 321 ELPI--NSLYQHSLVVGSPGSGKSQAIHGLIESINHRRECAIIYDPELEYIRAHYKAGRD 378 Query: 236 KILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM-GTKEDPFWQGSGRTIFAEAAYLMR 294 ILNP D+R A+W + + ++ A L P+ +DP+W + R I+ A Y + Sbjct: 379 VILNPFDSRTASWSPFNDLADYASWEQAAADLFPLPKGSQDPYWTLASRQIYCNAGYKLG 438 Query: 295 NDPNRSYSK--LVDTLLSIKI---EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVK 349 + +++ ++ L+ + I E L +L+N+PA + EK + S+R+V+ N + Sbjct: 439 VIKRQHFNEKPTIEELIWLIIGDFETLHYFLKNTPAERTLGEKEGLRSESLRSVIVNGIT 498 Query: 350 AIRYLQGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRG 408 + +L NG E F+I +W + Q +G LF+S ASL P+I+ W SIAI Sbjct: 499 RMMHLL----NGREDFSIAEW---INSPQTHGLLFLSRPQHLEASLSPLIAHWSSIAITT 551 Query: 409 LLAMGENRNRRV-WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L +++++ DE +L K+ L + RK+GG + G+Q +QL+DIYG+K Sbjct: 552 LFTRTPAQSKKITHIILDEFHSLGKVEILADAPARLRKYGGSIIMGMQQVSQLDDIYGDK 611 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A ++ + T+ R A F A +IG++E + E SYGA +RDGVS + Sbjct: 612 KAQTIIGQLATKLILRCQDPDTARFMAEQIGQREVSRTQENTSYGAHQLRDGVSLNTKEQ 671 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPG-----PYPAVKLSLKYQTRPKVAPEFIPRDINPE-- 580 + + +I + P + + P+P + +Y+ R F+PR + P+ Sbjct: 672 TEFVFMPEEIMNFPMFQGVLRVSNVREGRPFPVAPVKFRYRERSTGTEGFMPR-LGPDPI 730 Query: 581 --------MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIND 632 ++L A+L +AEG Q A E ++ S V+ + A +D Sbjct: 731 DEFMKKDRSSSKLYALLDKIKAEG-QGADNREVTAQDLSSSRSVSTPDGKSVSSGAAHSD 789 Query: 633 KKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQ 692 + D+ GI + E ++++P ++ V + A + QQ Sbjct: 790 EGFDAQNPEKRAGIAEGFLAPDATEAKREVPDSEIDTRPVAEEGARSQPSPSDTTAAQQN 849 Query: 693 MQRREE 698 + EE Sbjct: 850 SKSDEE 855 >UniRef50_B5YII5 Putative conjugative transfer protein TraD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YII5_THEYD Length = 570 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 233/502 (46%), Gaps = 36/502 (7%) Query: 112 FVLAAVVALVI-CLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS 170 F+LA V L+ L+T F + + K ++E G+++ + P ++ ++++D Sbjct: 85 FLLATPVWLLYPILLTKFKL------KAKAIVKDEHMRGQRIVE-PSELISLIRRDHPQI 137 Query: 171 DI-RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY 229 I IG +PI + E +F + G G+GK+ ++ ++ RQ+ VIYD G+++ + Sbjct: 138 GIFHIGRIPIPKQYETTHFFVVGKSGSGKTTMLNQVIEKIRQKKHKAVIYDTKGDYIAKF 197 Query: 230 YDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM--GTKEDPFWQGSGRTIFA 287 Y+P D I NPLD+R W+++ E D ++ A +LIP ED ++ R +F Sbjct: 198 YNPEKDLIFNPLDSRTLHWNIFDELYLVSDIESFAYSLIPPVPSGHEDEYFITGAREVFY 257 Query: 288 EAAYLMRNDPNRSYSKLVDTLLSIK---IEKLRTYLRNSP------AANLVE--EKIEKT 336 Y + R+ S L T+ + IE L+T + + L+E EK K+ Sbjct: 258 SILYYLYATNQRTMSALWQTVSQGEAGVIETLKTAVNHYKLDDCKRGLGLLEGYEKGVKS 317 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 A I + + Y +Y +EH+ F I+DW+ Q +G+LF+ + LKP Sbjct: 318 ASDIISTMKKYSNCFKY---VEHHQSSFKIQDWL----TKQDSGFLFLVNYDKIKNVLKP 370 Query: 397 VISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 + S+ L L + ++R RR++F DE +L ++P V+ L R G Q Sbjct: 371 LASVLLEQLGNAALTLPDDRERRLFFVLDEFASLQRMPKFVDFLERGRSKGISLWIATQD 430 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV 516 Q+E YG + ++ + T F +E+ + +G++E L+ E S G + Sbjct: 431 INQIEKEYGNRTMNTIINNCTTTVAFAVQDVNTSEYLSKFLGDREILETDESLSMGPADL 490 Query: 517 RDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD 576 RDG+S + + L+ S+ LP Y+ + G YP K + + P P +IP Sbjct: 491 RDGLSLTRRRKTDRLILPSEFALLPVFHFYIKI-GEYPISKSRIDLKIYPDTQPSYIPD- 548 Query: 577 INPEMENRLSAVLAAREAEGRQ 598 ENR + ++E Q Sbjct: 549 -----ENRFRIATVSEQSEQAQ 565 >UniRef50_B8GZQ6 Bacterial conjugation protein, ATP binding domain trwB n=1 Tax=Caulobacter crescentus NA1000 RepID=B8GZQ6_CAUCN Length = 605 Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 123/462 (26%), Positives = 222/462 (48%), Gaps = 22/462 (4%) Query: 109 WSAFVLAAVVALVICLI-TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDG 167 W V + + +C I + V+ W G+ +E+ G + + +AR+ +K Sbjct: 112 WGGLV-GVLFGVTLCAIWAYLVIRW-----GETAAEDNARRGASVVTE-RTLARLTRKRA 164 Query: 168 KDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK 227 IR+ +P+ E ++ L GT G+GK+ +R++ + +RGD ++YD SGEF+ Sbjct: 165 GPDAIRLASIPLPTTLETRHIALIGTTGSGKTTTLRQMLDAIDKRGDTAIVYDTSGEFIS 224 Query: 228 SYYDPSI-DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTI 285 YY P D ILN DAR A W + E D D+ A L+ G E W + R + Sbjct: 225 HYYRPERGDIILNAFDARGAFWSPFDEIHHPADADHIARQLVASTGAAEQDIWLDAARIL 284 Query: 286 FAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLT 345 A+ + + S L++TL + ++L+ +L ++ +A + E+ E+ + S+ +L Sbjct: 285 VADVLRKLHAEGRTDLSTLIETLGRLSRDQLKDWLADTSSARMFEQGAERASGSVLFMLA 344 Query: 346 NYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNG---WLFISSNADTHASLKPVISMWL 402 V+ ++YL+ + F+ R + DQ+ G W+F+ A+++P+++ +L Sbjct: 345 RCVQLLQYLRASPEDATVFSFRAHFEAL--DQRTGERPWIFVPRQEQYFAAMRPLLACFL 402 Query: 403 SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 A +L + + +RR+W DEL L K+ +L +LP RKFG V Q+ Q+ + Sbjct: 403 ECAATAILGLSPHPSRRIWLMLDELADLPKVDNLARLLPLGRKFGASVVVTFQALGQMRE 462 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG--EKEHLKASEQYSYGADPVRDGV 520 YG+ A +L NT+ F + ++A+ +G E E ASE + R + Sbjct: 463 RYGKDGAEALLANTNTKLFLQLADPDTRQWASQAVGTVETEIRGASENLDHQVGKGRTSI 522 Query: 521 STGKDMERQTLVSYSDIQ-SLPDLTCYVTLPGPYPAVKLSLK 561 + RQ L + Q LP Y+ LP +P +++++ Sbjct: 523 GS----SRQILPLLLESQFRLPPFHGYLQLPDAFPVARVTIR 560 >UniRef50_Q04230 TrwB n=5 Tax=Proteobacteria RepID=Q04230_ECOLX Length = 507 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 138/444 (31%), Positives = 210/444 (47%), Gaps = 50/444 (11%) Query: 146 VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRL 205 V+GG+ + RM ++ K + + +P+ RD+E ++ ++G G GKS ++R L Sbjct: 94 VSGGK--------LKRMTREKAKQ--VTVAGVPMPRDAEPRHLLVNGATGTGKSVLLREL 143 Query: 206 ANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTAN 265 A RGD +VI D +G+ + S + D ILNP D R W + E D+ A Sbjct: 144 AYTGLLRGDRMVIVDPNGDML-SKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYAL 202 Query: 266 TLIPMG-TKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSP 324 +++P G T E W GR + E A + S +L + LR +L + Sbjct: 203 SVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTL 262 Query: 325 AANLV--EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP---FTIRDWMRGVREDQKN 379 A +L + K S R VL++ + EH P F+IR W+ ED Sbjct: 263 AESLFAGSNEASKALTSARFVLSDKLP--------EHVTMPDGDFSIRSWL----EDPNG 310 Query: 380 GWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEI 439 G LFI+ D +L+P+IS W+ + +L++ E RR+W F DEL +L KL L + Sbjct: 311 GNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADA 370 Query: 440 LPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS--------PSHKIAE 491 L + RK G V G+QS +QL+D+YG K A +L RA FRS K E Sbjct: 371 LTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTL------RASFRSLVVLGGSRTDPKTNE 424 Query: 492 FAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME--RQTLVSYSDIQSLPDLTCYVTL 549 + +G EH ++YS STG+ +E R+ +V ++I +LPDLT YV Sbjct: 425 DMSLSLG--EHEVERDRYSKNTGKHH---STGRALERVRERVVMPAEIANLPDLTAYVGF 479 Query: 550 PGPYPAVKLSLKYQTRPKVAPEFI 573 G P K+ L+ + P F+ Sbjct: 480 AGNRPIAKVPLEIKQFANRQPAFV 503 >UniRef50_B9MIL1 Putative type IV secretory pathway VirD4 component n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MIL1_DIAST Length = 571 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 115/425 (27%), Positives = 203/425 (47%), Gaps = 15/425 (3%) Query: 155 NPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGD 214 N + + ++LKK+ + +G I E ++F L G+ G GKS I + + RGD Sbjct: 111 NGQQLQKILKKE--SGSLTVGGQKIPERLEARHFMLAGSTGVGKSVAISEMLDGIAARGD 168 Query: 215 MVVIYDRSGEFVKSYYDPSI-DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 V I D G F+K+YYD D ILNPLD+R +W E D D A +++P G Sbjct: 169 RVFIADAGGNFLKNYYDEERGDIILNPLDSRAVSWSPLAEMEGPWDADLIAKSIVPDGDG 228 Query: 274 EDPFWQGSGRTIF-AEAAYLMRND-PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEE 331 W + I A + +ND N +L + IE+LR +PA LV E Sbjct: 229 GSKEWNQYAQVITSAVLKHCWQNDLTNFDIFRLA---IIANIEELRMVFEGTPAQPLVAE 285 Query: 332 KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 EK SIR ++ Y+ +YL F+++ V ++ WLF + Sbjct: 286 GNEKMFGSIRGIVGTYISPFQYLDPAAGANNGFSLKSI---VEDNGAKNWLFFNYPDKQI 342 Query: 392 ASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 +++ P+I+ I + +L++ + NR+ W DE ++ ++ +++ L +ARK GG + Sbjct: 343 STVAPIIAAMTDIVSKSILSLEADNNRKFWLIIDEFASVGRISSILDFLTKARKNGGRAI 402 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 G+Q+ +QL+ YG A++L ++++ FR P A+ + +G+++ + + Sbjct: 403 IGVQTISQLKSAYGVNDASTLMSCLSSQIVFRVPDPDTADIMSRLLGDQQISRVIQSGGE 462 Query: 512 GADPVRDGVSTGKDMERQT----LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 + ++ G S ++ +Q +V +I + PDL + G PA + +++ R K Sbjct: 463 SSQSMQIGGSKSENWSQQITTDRIVMTGEIMNFPDLYGILNFAGDIPAAPIEVEWMERHK 522 Query: 568 VAPEF 572 VA F Sbjct: 523 VAEHF 527 >UniRef50_C7HYW0 Putative type IV secretory pathway VirD4 component n=1 Tax=Thiomonas intermedia K12 RepID=C7HYW0_THIIN Length = 535 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 128/474 (27%), Positives = 214/474 (45%), Gaps = 25/474 (5%) Query: 113 VLAAVVALVICLITFFVVSWILGR-QGKQQSENEVTGGRQLTDNPKD---VARMLKKDGK 168 +L+A V + + +S G G ++ N + G + D +AR K+ + Sbjct: 41 ILSAAVFVPFAYFAYKYLSKNFGAGTGSGKNINHLRGAAMVGGAELDNLVIARYGKR--Q 98 Query: 169 DSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS 228 D+ I + I R+ E + F G G GKS I + + QRGD I DRSG + Sbjct: 99 TGDLHIAGIRIPREFETRGFMFAGAPGTGKSVAITSMLDIIYQRGDAAFIADRSGIYAAR 158 Query: 229 YYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAE 288 YY+P D ILNP+DAR W E ++ D + A ++IP + W +TI A Sbjct: 159 YYNPQRDIILNPIDARAHEWSPLAEMRSEYDSETIAKSIIPDAPGDAAEWNHYAQTILA- 217 Query: 289 AAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYV 348 L + S + + +L+ L + L++ EK SIR +L Y Sbjct: 218 GILLHAWRAGLNNSAITRLAQRADMAELKEILADHAGIGLLQN--EKMFGSIRGILATYT 275 Query: 349 KAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 + R L +G F++ W+ +Q + F +D ++ +I+ + Sbjct: 276 IGLARLLPQAGRDG--FSLSAWV----HEQPAAFAFFPYLSDQMKPMRGIIAALADVYAD 329 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 +L + + NRR+W DE +L ++ + L ARK GGC + G+Q+ +Q+ +YG Sbjct: 330 AVLTLPPDANRRLWLVLDEFASLGRVDSMENFLTNARKHGGCSILGMQALSQVHSLYGRD 389 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A S+ ++TR R+P + AE+ + +G+K+ ++ S + + G S + Sbjct: 390 NATSMLSSISTRLTLRAPDAETAEYLSRGLGDKQVVRTMRSGSRSSS--KQGGSNTESWN 447 Query: 528 RQT----LVSYSDIQSLPDLTCYVTLPGPYPA--VKLSLKYQTRPKVAPEFIPR 575 +Q LV ++I PDL Y+ + G P ++LSL Q RP A F PR Sbjct: 448 QQIATERLVLPAEIMRTPDLVGYLQIAGDLPVGHIRLSLPPQ-RPDAAHAFTPR 500 >UniRef50_Q32X91 Probable TrwB n=1 Tax=Xanthomonas axonopodis pv. glycines RepID=Q32X91_9XANT Length = 510 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 12/410 (2%) Query: 165 KDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE 224 + G+ I I + I R E Q+F GT G GK++ I + R RG VI D G Sbjct: 104 RKGQAGAIEIAGVEIPRQLEAQHFLFTGTTGTGKTQAINSMLRTIRSRGQRAVIADPGGG 163 Query: 225 FVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRT 284 F S + + D + NP D R W + + D + A ++P G + W ++ Sbjct: 164 FY-SRFGRTGDVLFNPFDGRTVDWSPFADIENDYDCERIAKAIVPDGVGDGMQWHHYSQS 222 Query: 285 IFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 A M RS +L+ L + + ++L L +PAA L + E+ S RA+L Sbjct: 223 FVAAVLRSMHAKGERSIKRLLYWLTTAEPKELADMLAGTPAAALCAKGNERMLASTRAIL 282 Query: 345 TNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 ++YV YL + F++R+W R GWLF++ D L+ +++ L + Sbjct: 283 SSYVGVFPYLA----DEGTFSVREW---TRNAMGEGWLFVTYRDDQMGMLRGLVATMLEL 335 Query: 405 AIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY 464 AI L++ E+++R +WF DE+ +L K+ L L + RK+GG + G+Q+ AQL Y Sbjct: 336 AIVEGLSLSEDQDRGLWFVMDEVDSLGKVTSLRAGLTKLRKYGGRCILGLQTVAQLRTTY 395 Query: 465 GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEK--EHLKASEQYSYGADPVRDGVST 522 G A +L +T+ R+ + A E+G++ E S+ S G + + S Sbjct: 396 GRDEAQTLLANCSTKLVLRAGDAETARTMEDELGQQEIERTTLSDSTSKG-EFFKGSTSA 454 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 + RQ+ V S+I L DL Y+ +PG +++L Y P+V P F Sbjct: 455 SQQYTRQSAVMASEIMGLLDLHGYLKMPGE-TIHRVALDYVGMPEVQPTF 503 >UniRef50_B7Q9R6 Coupling protein TraD, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q9R6_IXOSC Length = 308 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 145/282 (51%), Gaps = 4/282 (1%) Query: 271 GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVE 330 G+ D FWQ S +F + R+ + L L + + L + L+ + AA Sbjct: 2 GSGNDQFWQNSSEILFISCVESLIKKDCRTITSLKKILTKVNRQDLASLLQGTRAARYFS 61 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 ++ TA SI +V+T V+ I LQ + + F+++ + + E N WLF++S+ Sbjct: 62 KQNTTTAESILSVMTTGVRPICLLQ---DSKQQFSLKQYFYNI-EKGSNSWLFLASSPSQ 117 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 P+++ L +A+ L+ G N RR+WF DEL +L +L L +L E+RK+GGC Sbjct: 118 REVTLPLLACILELAVSYLIESGINEQRRMWFVIDELASLGRLNSLSSLLAESRKYGGCV 177 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 + QS QL D YG A ++LFD T+ FRS A G E+ + S Sbjct: 178 MAATQSLNQLFDKYGHYAGSTLFDQFATKFMFRSTDPSTARLITDIFGNVEYASQQKNTS 237 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 YGA RDGVS + +R++L++ +DI SL DL C+V LP P Sbjct: 238 YGAHEHRDGVSYTEQEKRKSLITTNDIASLKDLECFVGLPDP 279 >UniRef50_A9I2I0 Type IV secretion system protein VirD4 n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2I0_BORPD Length = 548 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 129/442 (29%), Positives = 207/442 (46%), Gaps = 52/442 (11%) Query: 153 TDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIR--------- 203 T + K +A ++ GK I +G +P+ +E + + G G+GKS ++R Sbjct: 100 TTSAKSLALQCEESGKQ-QIDVGGIPMPTANENLHLLITGATGSGKSVLLRNMAASVLRR 158 Query: 204 -------RLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLT 256 RL +R D +++ D +G+ + ++ P+ D ILNP DAR W + E Sbjct: 159 SRHTMNNRLLGQMPERNDRMIVIDPNGDLLSKFWQPN-DVILNPYDARSQGWSFFNEVRA 217 Query: 257 QPDFDNTANTLIPMGT-KEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEK 315 D+ A++++PM K W GR + E A + S ++D IE Sbjct: 218 DYDWKRLAHSMVPMSQDKNAEEWNDFGRLLLRETAKKLHQLQGNEAS-IMDLFRLCTIED 276 Query: 316 ---LRTYLRNSPAANLV--EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG-EP--FTIR 367 L+ +L + A +L + K S R VL+N + EH G +P F+IR Sbjct: 277 PKVLKQFLEGTLAESLFVGSSEASKALSSARFVLSNKLS--------EHTGMKPGRFSIR 328 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDEL 427 DW+ G L+I+ D +S+KP++S W + I +L+M E+ + R W F DEL Sbjct: 329 DWL----SKPNGGNLYINWREDMMSSMKPLVSSWADVFITSILSMPESTHLRWWLFIDEL 384 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPS- 486 +L LP L L + RK G V G+QS +QLE IYG A ++ RA FR+ + Sbjct: 385 ASLEALPSLEAGLTKGRKSGLRVVAGLQSTSQLEHIYGRTMATTI------RASFRNLAV 438 Query: 487 ---HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT--LVSYSDIQSLP 541 + A ++ E E+ Y D +T +M+R T +V+ + IQ+LP Sbjct: 439 LGGSRTDPQTAKDMSESLGKHEVERPKYSISRSVDHRNTSDNMDRTTEDVVTAAQIQALP 498 Query: 542 DLTCYVTLPGPYPAVKLSLKYQ 563 L YV L G +P ++SL ++ Sbjct: 499 PLGGYVALAGDFPIARVSLPFR 520 >UniRef50_A5FU76 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FU76_ACICJ Length = 604 Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 116/430 (26%), Positives = 200/430 (46%), Gaps = 35/430 (8%) Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM--------VVIYDRSG 223 + +G +P+ D E+Q+ L+G G GK++V R+R + V+I D G Sbjct: 176 LSVGGIPLEWDREVQHTFLNGAAGTGKTQVAEGFLRAIRERALLPYIKKSPRVIILDPGG 235 Query: 224 EFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGR 283 + S + D +LNP DAR AW + E DF+ A +P+ + W GR Sbjct: 236 AYY-SRFGQDGDVLLNPFDARSVAWSPFAEIKRPQDFNRVAAAFVPLAEGPNKEWSEFGR 294 Query: 284 TIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAV 343 A+ M + +S +L LL E L YL N+ L E+ K + +A Sbjct: 295 KTMADTMRAMVRNDEKSPQELF-RLLDGSAENLAFYLNNAEIYGLTGEENMKMFSNAKAT 353 Query: 344 LTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLS 403 + ++ +YL+ +G F++RDW+R E +GWLFI+ D L+ ++ Sbjct: 354 IAPNIEIFQYLK---PDGN-FSVRDWLRKGDEANDSGWLFITYRDDQMKLLRQFVAAMAD 409 Query: 404 IAIRGLLAMGENR------NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSY 457 +AI L++ N +RR+++F DEL ++ + +L + L + RKFGGC V G+Q+ Sbjct: 410 LAILEGLSLPSNEGLPAEEHRRLFYFMDELDSIGAVSELKDALIKLRKFGGCCVLGLQTI 469 Query: 458 AQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVR 517 +QL +YG ++ + T R + AE +G+++ + + YS A R Sbjct: 470 SQLRAVYGRDTTRAILGNVATNVVLRPQDGETAEEMEKLLGDQDIERETVTYSQSAGNSR 529 Query: 518 DGV--------STGK--DMERQTL----VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 G+ STG+ + +RQ + V S++Q++ +L + P P +L Y Sbjct: 530 SGMFGNGHSNTSTGRTANQQRQIVTRKCVLASELQNMENLHGILMRPAS-PHHPFTLDYV 588 Query: 564 TRPKVAPEFI 573 P++ F+ Sbjct: 589 EMPRINAPFV 598 >UniRef50_Q7X127 TrwB n=8 Tax=Gammaproteobacteria RepID=Q7X127_XANCI Length = 524 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 115/404 (28%), Positives = 189/404 (46%), Gaps = 18/404 (4%) Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 I IG +P+ E +N + ++GAGKS + + + A +R D + + D +G F + Sbjct: 127 IMIGPMPMPLHLENRNTLICASIGAGKSVALESMISSAVKRRDKMAVIDPNGTFYSKFSF 186 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAA 290 P D ILNP D R + W L+ E DFD A ++IP D W R + A+ Sbjct: 187 PG-DTILNPFDRRSSGWTLFNEIKGVHDFDRMAKSVIPPQIDPSDEQWCAYARDVLADTM 245 Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 + N LV+ L+ E +R +L N+ + E EK SI+ ++ YV+ Sbjct: 246 RKLVETNNPDQDTLVNLLVREDGEVIRAFLANTDSQGYFRENAEKAIASIQFMMNKYVRP 305 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 +R++ G+ F++ W+ D G LFI+ D A+ +P+++ W+ +L Sbjct: 306 LRFMT----KGD-FSLHKWV----HDPNAGNLFITWREDMRAAQRPLVATWIDTICATIL 356 Query: 411 AMGENR---NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 ++ ++ +RR+W F DEL +L KL V + RK G IQ +AQL++ YG+ Sbjct: 357 SISDDAQHLSRRLWLFLDELESLGKLESFVPAATKGRKHGLRMAASIQDWAQLDETYGKD 416 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 AA +L F + S+ + A EI K+H++ Q + A G + + Sbjct: 417 AAKTLLGCFRNYLIFGA-SNALNADKASEILGKQHVE-RIQITTNAGGSGGGGRSRHVVA 474 Query: 528 R--QTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 + +V S+I +L DL YV +P K+ L Y P A Sbjct: 475 SPPEPVVLDSEISNLKDLGGYVMFAEDFPIAKIKLPYVKYPHRA 518 >UniRef50_C1F5K1 Conserved domain protein n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5K1_ACIC5 Length = 666 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 149/530 (28%), Positives = 235/530 (44%), Gaps = 50/530 (9%) Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDG---KDSDIRIG 175 A + ++ F V+ + RQ + + G +LT P+ R +K DG K D++ Sbjct: 161 AGLFLILLPFAVTLDVKRQKALKYGRRLKGPERLT--PQAFNRAVKGDGIGFKTDDMK-E 217 Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI- 234 + I +E Q+ + G GAGKS ++ ++ R R D ++YD + EFVK +YDPS Sbjct: 218 MIRIPAKAEAQHMQIIGDTGAGKSAMLFQVLRQVRGREDSAIVYDPAREFVKRFYDPSRG 277 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLM 293 D ILNP D RC W L +E ++ + A +L P ++ F+ S + IFA +LM Sbjct: 278 DVILNPFDKRCPYWGLAEELRSRSEAKALAASLFQPPQDRKGEFFIESPQKIFA---FLM 334 Query: 294 RNDPNRSYSKLVDTLLS--IKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 +Y D L+ +++ L+ + A+L++ + + + L ++ Sbjct: 335 ------AYGPTPDELVQWMSNPDEIDRRLKGTEHAHLIDPRAHQQRAGVLGSLALVADSL 388 Query: 352 RYL-QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 R L + E NG +T +W +++ GW+FI+S +L+P+ S+W+ + LL Sbjct: 389 RLLPKKGEGNGR-WTATEWA-----EKRQGWIFITSLPAEREALRPLQSLWIDWLVLRLL 442 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 +RVWF DEL +L KLP L + E+RK V G Q AQLE +YG A Sbjct: 443 NEPTKEQKRVWFVIDELASLQKLPQLHTAITESRKSRNPVVLGFQGKAQLEYLYGHLAEV 502 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD--MER 528 L T + + E+ + IG+ E + E + DG +G + +ER Sbjct: 503 ML-SQPATSVWLTTKEPNAGEWVSKFIGKVEIERLRETHF-------DGTRSGHNFTIER 554 Query: 529 QT--LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF---------IPRDI 577 Q LV S+I LPDL ++ S Y P+VA F +P D Sbjct: 555 QVEPLVLESEISGLPDLHAFMKYQN--YVTYFSFPYFDMPEVAKPFELRERTDDKLPYDP 612 Query: 578 NPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGE-DVTQAEQPQQPV 626 E R A L EP E + E A+Q +Q V Sbjct: 613 TALREGRPQAELKQEPEAPVPAPEPNEPVASEAIQPELSAAPADQEEQNV 662 >UniRef50_A5V2N2 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2N2_SPHWW Length = 578 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 91/298 (30%), Positives = 153/298 (51%), Gaps = 9/298 (3%) Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 + + +P+ R+ E + G G+GKS + L A +RGD ++ D G + +++ Sbjct: 190 LTLAGVPLSREDETMHVAAIGATGSGKSTALHGLMAGALRRGDRHIVADPEGAAMSAFFA 249 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAA 290 D +L+P DARCA WDL E + D+ A++L+P +GT + W + + A+ Sbjct: 250 DG-DILLDPFDARCARWDLLAEIESPSDYAFLASSLLPHLGTGDHDQWISYAQRLLADTM 308 Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 S S V L S +I +L+ + +A EE E+ SI L V Sbjct: 309 ENFVTLELGSTSDYVALLGSARIAELKELCAGTSSARYFEEGGERMLASILGTLAPAVAH 368 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 +R + +GE F++R W+R + G L++ A+ A+++ ++S W++IAI L Sbjct: 369 LRLIA--MASGEVFSLRRWIR-----EGRGSLWMPYAANQVAAMRGLVSCWMNIAILETL 421 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 ++ +R+RR+WF DEL L ++ L + RK GGC G QS+AQ++ +YGE A Sbjct: 422 SLPASRDRRIWFHIDELDALGRIEGLKDAQARLRKVGGCVAIGFQSFAQVKHVYGEAA 479 >UniRef50_B9BFK1 TrwB protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFK1_9BURK Length = 529 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 111/423 (26%), Positives = 190/423 (44%), Gaps = 19/423 (4%) Query: 157 KDVARMLKKDGKDS--DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGD 214 K R+ K+ G + +++ + + D E QN + G G GKS+ I+ L A RGD Sbjct: 108 KRYQRVAKQRGDEPRPPVKVCGVEMPTDLETQNIMIVGAPGTGKSQAIQGLIASALDRGD 167 Query: 215 MVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGT-K 273 +V D +G ++ P D I+NP D RC W L+ E DFD +++ IP Sbjct: 168 RMVTVDPNGSLCARFFLPG-DIIINPYDRRCVGWSLFNEAGHDFDFDRLSHSSIPPQVDA 226 Query: 274 EDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI 333 + W G R++ ++ + ND LVD + E L +L + +A + Sbjct: 227 QAEEWAGYARSLLSDTMTRLHNDDMPDMRVLVDLTTRERREVLSKFLEQTGSAGFFAKDA 286 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 E+ SI L Y++ + I+ F+IR WMR D+ G ++I+ D + Sbjct: 287 ERATASIIFTLNKYIRPL-----IKIPDGDFSIRKWMR----DESAGNIWITWREDQRTA 337 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 L P I +WL + +L+ + +RR+W DEL ++ +L + + RK G C V G Sbjct: 338 LGPTIPIWLDLVFAMILSDAPSFSRRLWVNMDELASIGRLYSFEPAVSKGRKHGLCVVGG 397 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 +Q QL G A ++ + + + A +G + E++ G Sbjct: 398 LQDVVQLRMNLGHDPADAVLACFRSMLALGGANAVTTKTLAAMLGSHD----VERHPIGV 453 Query: 514 DPVRDGVSTG-KDMER-QTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 + ++T + ++R + LV+ S + +LPDL Y+ +P K+ + P PE Sbjct: 454 NQQWWNLNTRERKIDRDEPLVTPSQLANLPDLQGYLKYGKDWPLTKVKFTARDYPVRHPE 513 Query: 572 FIP 574 F+P Sbjct: 514 FVP 516 >UniRef50_B6AM16 Conjugation TrwB n=4 Tax=Leptospirillum sp. Group II RepID=B6AM16_9BACT Length = 647 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 116/406 (28%), Positives = 189/406 (46%), Gaps = 36/406 (8%) Query: 186 QNFCLHGTVGAGKSEVIRRLAN---YARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 ++ + G G+GK++ I R+ + + G+ ++ D G+F + S D +LNP D Sbjct: 80 KHMIIGGGTGSGKTQAIHRVLDRVFWGVSNGEKAIVTDSGGQFFSTRSRKS-DLLLNPFD 138 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP---------FWQGSGRTIFAEAAYLM 293 R +W+ + E Q D+++ A TL+P K P + +G +I A Sbjct: 139 GRSVSWNPFSEIENQWDYESLAETLVP--GKSGPGAMADDWIRYARGLISSIMKGLAEEG 196 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 DP R V LL +EKL YL +P L+ ++ S+ V + A+R Sbjct: 197 NPDPRR-----VPELLRGDMEKLAPYLAGTPEEALLNPASDRFLGSVVGVAS---LALRP 248 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 Q + +G+ F+IR W+R D G LFI+ + +K +I WL IAI +L + Sbjct: 249 WQYLSPDGD-FSIRKWIR----DGAGGTLFITYKDAQMSLMKDLIGAWLGIAITEVLDLS 303 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 + RRVW DEL +L + L RK+G C + IQS AQL++ YG+ +L Sbjct: 304 PDFERRVWLVEDELDSLGTVAGLANANTRGRKYGLCSIGAIQSIAQLDEKYGQLGGQTLL 363 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKE-----HLKASEQYSYGADPVRDGVSTGKDMER 528 +++ FR S K +E+ + E+G++E KAS + T K + Sbjct: 364 STFSSKIIFREGSWKDSEYWSNELGQREITEQSITKASTSSRHDNSSTETVAQTRKVI-- 421 Query: 529 QTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 QT++ S++ LPD T Y PG K+ + + + P F+P Sbjct: 422 QTVLP-SELAELPDRTAYCRFPGMEGIHKIEFEIRKYKPIRPAFLP 466 >UniRef50_B2TH73 Type IV secretion system protein VirD4 n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH73_BURPP Length = 562 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 122/407 (29%), Positives = 193/407 (47%), Gaps = 15/407 (3%) Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 +RI +PI E +F + G+ GAGKS VI A R + ++ D +G+F++ +Y Sbjct: 115 LRIAGVPIPEWLEALHFRVIGSTGAGKSVVISDYIESALARRERMICIDPNGQFMEKFYR 174 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAA 290 D I+NP +AR W ++ E T D + + +LIP + E W RTI +E Sbjct: 175 EG-DIIINPFEARTKFWGIFNEIRTPYDVASYSISLIPKSPSTEQEIWNAMARTISSEVM 233 Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 + LV L E+L L ++ A + E+T S+RAVLT Y+ Sbjct: 234 LKLWRLGIGDTDHLVYWLTIASNEQLMEMLADTAARGMFHGA-EETIGSVRAVLTRYITP 292 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 +YL IE F++R+W+ EDQ N W+ D ASLKP+IS +A L Sbjct: 293 HKYLSDIETVEGYFSLREWIDSNAEDQPNVWIIWRE--DQLASLKPLISCMFDVACNAAL 350 Query: 411 AMG-ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAA 469 + + DE+ +L KL LV + RK G+QS AQL+ G+ A Sbjct: 351 SKPITDETVATHLVVDEVDSLEKLNYLVPAATKGRKHRLHICAGMQSDAQLDGTNGKDDA 410 Query: 470 ASLFDVMNTRAFF---RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 ++ + + T ++ + + G +GE E ++ Q + +D RD S G+++ Sbjct: 411 MTVRNSLRTTVALGIAEGDTYTAEQLSKG-LGEHEVIR---QRTTASDTGRD--SHGQEV 464 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 ++ +V S I LP+LT Y+ L G +P K ++ Y+ R V FI Sbjct: 465 IKERVVIPSQITGLPNLTGYLKLAGDWPICKFTMPYKKRKAVTEAFI 511 >UniRef50_B6AM17 Plasmid coupling TrwB n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AM17_9BACT Length = 425 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 115/428 (26%), Positives = 205/428 (47%), Gaps = 37/428 (8%) Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV------VIYDRSGEF 225 RI + R +E+++ + T G+GKS++I +L N + D +I D +G+F Sbjct: 13 FRIPGIEFPRGAELEHILIPATTGSGKSQLIHQLLNRVLEGIDTAPDREKALITDPNGQF 72 Query: 226 --VKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM--GTKEDPFWQGS 281 + Y + D++LNP D R W+ + E + D+ A IP G ++ W+ Sbjct: 73 AETRGYKN---DRVLNPFDRRSMKWNPFSEIKNEYDYKLLAAAAIPSADGKGDETEWRKY 129 Query: 282 GRTIFAEAAYLMR--NDPNRSYSKLVDTLLS-IKIEKLRTYLRNSPAANLVEEKIEKTAI 338 + + A+ LM+ + ++ + V LLS + E LR YL + + +L+ ++ Sbjct: 130 AQDMLAD---LMKGLHRAEKTDPREVQRLLSMVDPEALRPYLSGTSSESLLSGPNDRYFG 186 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 S+ VL+N + A +L E +GE F+IR+W+R + G LF++ +++P++ Sbjct: 187 SVIGVLSNALAAWEFL---EPDGE-FSIREWVRAGK-----GCLFLTYTDAQIEAMRPLL 237 Query: 399 SMWLSIAIRGLLAMG---ENRN---RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 WLS+AIR L++ ++R RRVWF CDEL +L + L + L RK G + Sbjct: 238 GCWLSLAIRETLSLPIEVDDRGLALRRVWFVCDELDSLGTVHGLSDALSRGRKPGLAVIS 297 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY- 511 IQS AQL YG+ +A+L + R + A + +G+ E S + + Sbjct: 298 AIQSIAQLRTRYGKDGSAALLACYVNKLVMRQGDFEDARHWSDYLGQTEEEWISRTWGHS 357 Query: 512 --GADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 G + + E + L+ S++Q +P Y + G + ++ PKVA Sbjct: 358 SSGGGHASENQTLAARREIRQLLLPSELQEIPKFCGYARISGLSGIRPFRFEPRSFPKVA 417 Query: 570 PEFIPRDI 577 F+P+++ Sbjct: 418 EAFLPKEV 425 >UniRef50_Q17U09 TraJ n=11 Tax=root RepID=Q17U09_ECOLX Length = 509 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 134/479 (27%), Positives = 227/479 (47%), Gaps = 41/479 (8%) Query: 95 VLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTD 154 ++ + + +W LWSA + + V LI F + R K + ++ G +L Sbjct: 44 LVKNTFSLW---PLWSALIAGWFIG-VGGLIAFIIYD--KSRVFKGERFKKIYRGTELV- 96 Query: 155 NPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGD 214 + +A ++ G + + + ++PI +E +F + GT G GK+ + L + RG Sbjct: 97 RARTLADKTRERGVN-QLTVANIPIPTYAENLHFSIAGTTGTGKTTIFNELLFKSIIRGG 155 Query: 215 MVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP----M 270 + D +G F+K++Y P D ILN D R W + E D++ N+++ M Sbjct: 156 KNIALDPNGGFLKNFYRPG-DVILNAYDKRTEGWVFFNEIRRSYDYERLVNSIVQESPDM 214 Query: 271 GTKEDPFWQGSGRTIFAEAAYLMRN-DPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV 329 T+E W G GR IF+E + + + + +++ ++ +KL+ +L +PA + Sbjct: 215 ATEE---WFGYGRLIFSEVSKKLHSLYSTVTMEEVIHWACNVDQKKLKEFLMGTPAEAIF 271 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNAD 389 EK S R VL+ + +L+ E N F++RDW+ +D K G LFI+ + Sbjct: 272 SGS-EKAVGSARFVLSKNLAP--HLKMPEGN---FSLRDWL----DDGKPGTLFITWQEE 321 Query: 390 THASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 SL P+IS WL +L MGE + R+ F DEL +L LP+L + L + RK G C Sbjct: 322 MKRSLNPLISCWLDSIFSIVLGMGE-KESRINVFIDELESLQFLPNLNDALTKGRKSGLC 380 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF---RSPSHKIAEF--AAGEI-GEKEHL 503 G Q+Y+QL +YG A ++ M + R + + + GEI GE E Sbjct: 381 VYAGYQTYSQLVKVYGRDMAQTILANMRSNIVLGGSRLGDETLDQMSRSLGEIEGEVERK 440 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 ++ Q + V +D++ V+ ++I LP+LT Y+ LPG P K K+ Sbjct: 441 ESDPQKPW-------IVRKRRDVKVVRAVTPTEISMLPNLTGYLALPGDMPVAKFKAKH 492 >UniRef50_C1F4S3 Conserved domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4S3_ACIC5 Length = 674 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 137/523 (26%), Positives = 233/523 (44%), Gaps = 59/523 (11%) Query: 121 VICLITFFVVS---WILGRQGKQQSENEVTGGRQLTD----NPKDVARMLKKDGKDSDI- 172 +I I F++ WI GR Q ++ GR+L +P+ R+++ DG ++ Sbjct: 155 IISGILVFILPLPYWI-GRD--IQRRKQIKYGRRLRGPILVSPRTFNRLVRGDGVGFNVS 211 Query: 173 -RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY- 230 R L I R +E ++ + G G+GK+ +I +L ++RG ++YD + EF++ +Y Sbjct: 212 SRGQPLRIPRAAEDRHIEIIGDTGSGKTTLIMQLLRQVQERGHPAIVYDPACEFIQRFYS 271 Query: 231 DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIFAE 288 + D +LNPLD RC W +E + + + A +L P + F+ + + IFA+ Sbjct: 272 EKRHDIVLNPLDRRCPYWGPSEELVRRSEARTLAASLFQHPDERTKHEFFIETPQKIFAK 331 Query: 289 AAYLMRNDPNRSYSKLVDTLLS-IKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNY 347 L+ + P + +L++ + + +I+K ++ + A ++ + + L Sbjct: 332 ---LLLDLP--TPQQLIEWMSNEAEIDK---RVQGTELAAMIHPSAPQQRSGVLGSLNLV 383 Query: 348 VKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 + R L + +T R+W + + GW+FI S A +L+P+ S W+ + + Sbjct: 384 ADSFRLLPSKDEAKREWTAREWSK-----HRQGWIFIPSQASEREALRPLHSFWIDMLVL 438 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 LL VWF DEL TL KLP L + E RK G V G Q AQLE IYG Sbjct: 439 RLLTAPSPNQPPVWFVLDELATLQKLPQLHTAITENRKSGNPLVLGFQGKAQLEVIYGHL 498 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A L TR F ++ + A++ + IG E + E +G G+ ++ Sbjct: 499 AEVMLSQPA-TRIFLKTGEPEAAQWVSRAIGNVEVERVKETRYHGG-----GMGQNFTVD 552 Query: 528 RQT--LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRL 585 RQ LV S+I + + Y+ Y R P IP D P+ RL Sbjct: 553 RQIEPLVLDSEISGMEPMRAYLK----------HGNYVARFGFHPVKIPDD-KPKFIERL 601 Query: 586 SAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 + R+A +PD +G+ + ++PVSP Sbjct: 602 HSDYIVRDA---------KPDAQNEPAGQ--SNGNHSREPVSP 633 >UniRef50_Q3SHV9 Putative type IV secretory pathway VirD4 component n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHV9_THIDA Length = 565 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 108/435 (24%), Positives = 190/435 (43%), Gaps = 24/435 (5%) Query: 136 RQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVG 195 R G + + G+QL ++ + ++ + + IG +PI E F L G+ G Sbjct: 88 RPGDADDDADNLRGQQLV-TVAEIKKQIRSAKTKTRLEIGGVPIPIYVEDGGFLLTGSPG 146 Query: 196 AGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY-DPSIDKILNPLDARCAAWDLWKEC 254 GKS+ ++ + + G VI D G F Y D ++ + NPLD R +W E Sbjct: 147 TGKSQATTKMLDTLQAGGHRAVIADAEGIFYSRYAGDGAV--LFNPLDRRSVSWSPLAEL 204 Query: 255 LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN--DPNRSYSKLVDTLLSIK 312 + D A +LIP G + W + +T+ L+R + +++ ++L Sbjct: 205 KSPQDCSALAKSLIPDGHGAEASWNDAAQTVLEG---LLRRCWETSKTNAELYRLACVAD 261 Query: 313 IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRG 372 IE+L+ L + A +V + +R L Y++ +L F++RD++ Sbjct: 262 IEELQQLLAGTAAMTVVGNA--RYFGEVRPGLGRYLRCFEHLDPAAGRAS-FSVRDFI-- 316 Query: 373 VREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM-----GENRNRRVWFFCDEL 427 ++ GWLFIS + A+L P+I L +A R +L++ ++ RR W DEL Sbjct: 317 ---TEETGWLFISYTQEQRAALLPLIQCTLDVASRAILSLPHTTGDRSKLRRTWLVLDEL 373 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSH 487 P L ++ L+ +L K G + Q+ A + YG A ++ + T R Sbjct: 374 PLLGRIMSLIPLLTNGSKHGAAVIATAQTIALFREAYGHDATQTILATLGTWLTLRVSDA 433 Query: 488 KIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 + AE+ + +G++E + D S R +V S +Q+LP L Y+ Sbjct: 434 ETAEYMSKSLGDEEVRRVVASGGKNDSGKSDNWSEQHSTRR--VVMPSQLQNLPRLHGYL 491 Query: 548 TLPGPYPAVKLSLKY 562 + GP P ++L Y Sbjct: 492 NISGPLPVCAVTLPY 506 >UniRef50_C6RJZ5 Putative uncharacterized protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJZ5_ACIRA Length = 506 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 131/468 (27%), Positives = 215/468 (45%), Gaps = 58/468 (12%) Query: 129 VVSWILGRQGKQQSENE----VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE 184 V++W + K E V G QL +P ++ + G IR +P+ +D + Sbjct: 70 VIAWFYFQNNKTPFAGERYVKVLRGLQLV-SPYKFKKLTTEKGYQ--IRFCGMPVPKDLK 126 Query: 185 IQNFCLHGTVGAGKSEVIRRLANY----ARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 ++F L G G GKS I + AR + ++V+ D +G + +Y D I NP Sbjct: 127 YKHFLLTGGTGQGKSVSISDFLDSCVSDARSKTRLIVV-DPNGSYTSLFYKKG-DVIFNP 184 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGT--KEDPFWQGSGRTIFAEAAYLMRNDPN 298 DAR +W + E D + + TLIP + K + F RTI A + P+ Sbjct: 185 FDARSVSWSIINEVRNPYDIETYSATLIPKSSDAKHENF-NSMARTIIKSAMSKVLEMPD 243 Query: 299 RSYSK----LVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYL 354 S S +DTLL+ ++LR +L +PA +L+ + ++R+++T Y L Sbjct: 244 ISKSAKAQLFLDTLLNSSDDQLRDFLMGTPAFSLLGN--TELVGTLRSIITTY------L 295 Query: 355 QGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 HN F+ RD+++ G +FI+ D +L+P++S + LL+ Sbjct: 296 TPHTHNSIGDFSFRDYLKN-----GEGNIFITWREDQLTALQPLVSCITDVVCSSLLSDF 350 Query: 414 ENRNRRVWFFC-DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 +N + V FC DEL +L++L L +L + RK + GIQS AQL IYG+K + +L Sbjct: 351 DNYSDFV--FCLDELGSLNRLSYLEAVLTKGRKHRLIALAGIQSLAQLITIYGDKFSITL 408 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE-QYSYGA-DPVRDGVSTGKDM---- 526 R F S F + ++ E + S+GA + +R S+ KD Sbjct: 409 ------RGCFSS-------FGVCAVNAQDTYTPQEYEKSFGAIEVLRKMKSSHKDAKSEL 455 Query: 527 --ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 E++ +V +I SL L Y+ G YP + +KY++ KVA + Sbjct: 456 VKEKENVVKAEEISSLQPLHFYLKFSGHYPPTLVKMKYRSYAKVAASY 503 >UniRef50_A9ATZ0 Type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ATZ0_BURM1 Length = 675 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/459 (24%), Positives = 204/459 (44%), Gaps = 18/459 (3%) Query: 110 SAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKD 169 +AF A V++ + ++ V L R G++ EN+ G + +++++ ++++ + Sbjct: 117 TAFRYVAWVSVGLGAAGYYAVWRSLARLGRRARENKRVDGALDVVSAEELSKAVRRE-EA 175 Query: 170 SDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY 229 + D+ + R + +Q G G GKS I L RG VIYD +GE+ ++Y Sbjct: 176 GPYTVLDVALPRSAPMQGIMFVGAQGTGKSLGIHDLMGQVFARGRKSVIYDHAGEYFRAY 235 Query: 230 YDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP----MGTKEDPFWQGSGRTI 285 Y P D NP W ++ E D D A+ +P + F++ + R + Sbjct: 236 YRPGKDLFFNPALLGSVPWSMFMEMENTYDSDTLAHAFLPPKAGVVHGASAFFEDAARVL 295 Query: 286 FAEAAYLMRNDPNRSYSKLV-DTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 F+ A +R Y++L+ + +LS+ ++L ++NS A++ V + + + + Sbjct: 296 FSVMALRLRQR-GAVYTRLISEAILSMPEDELELLIKNSVASSAVGGDSKGQRQGVISSI 354 Query: 345 TNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 Y+ I +Q +G +T+R++ E + LF+ DT+A P+ + +++ Sbjct: 355 AIYLNGIAAVQ----DGT-WTLREFY----EKDDDTRLFLIGTEDTYAMFAPLFRLLITM 405 Query: 405 AIRGLLAMGENRNR-RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 A + + A E R+ R WFF DE L + L E RK+G C GIQ+ Q Sbjct: 406 AFQTIAARREIRHEDRYWFFLDETHVLGDI-KLDARQAELRKYGVCVAAGIQADKQFNTS 464 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 G A +L + NT R + E A +G+ E + RDG Sbjct: 465 MGADRAETLMNCFNTTVTLRLNEPNMQERMARRLGKSETAVVRAGQAIAVTDWRDGGQLS 524 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 +D + +V S I L + YV + G +P ++ ++ Sbjct: 525 QDEREKWVVMPSKIGLLKNCMAYVQVAGDFPPALVNYRH 563 >UniRef50_A3ETT1 Probable conjugal transfer protein (TraD) n=1 Tax=Leptospirillum rubarum RepID=A3ETT1_9BACT Length = 697 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 114/407 (28%), Positives = 188/407 (46%), Gaps = 23/407 (5%) Query: 184 EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDA 243 E+++F L G+ G+GK+ V+ + + A QRGD +I+D G+F + D +IL+P DA Sbjct: 157 EVRSFSLVGSPGSGKTTVLNGMVDQAIQRGDRSLIFDFKGDFTERIPD-GKKRILSPWDA 215 Query: 244 RCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIF-AEAAYLMRNDPNR-S 300 R W L + T+ + LIP+ + + W + R I AE LM Sbjct: 216 RAVRWALGSDVSTEVQARLLSECLIPINPRANEQMWGNASRAILRAELHKLMAERRGTWG 275 Query: 301 YSKLVDTLL-------SIKIEKLRTYLRNSPAANLVEEKIEKTAISI----RAVLTNYVK 349 + +L D LL S ++ + N A+ +V++ KT +S+ A L + + Sbjct: 276 FHELGDALLADILCPDSDRVVQTLVTRFNPEASRIVQDLTSKTTLSVLIDQSAALGDALL 335 Query: 350 AIRYLQGIEHNGEPF-TIRDWMRG-VREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 R+ + ++ G PF +R ++ G +R L + ++ T S LS +I Sbjct: 336 LSRFDRELKKAGRPFLPLRSYLSGEIRGTPPPVILPVHPDSRTLTSAFVSAVFALSSSIV 395 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 E RR+WFF DE+P ++P + + L AR G V G Q+ AQ+ + YGEK Sbjct: 396 THFPDAEPSARRIWFFLDEVPQAGRIPPITDFLVTARSKGCRTVLGFQTPAQVAETYGEK 455 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 + + F + S + ++ + IGE+E L + + G P G +T E Sbjct: 456 TLEIWDNATGVKIFLQCVSPEAKKYVSQSIGEREVLAFKKSENVGIAPAHTGHTTNWVDE 515 Query: 528 RQTLVSYSDIQSL-----PDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 R+ LVS + SL +T V + G PAV L+ ++ PK A Sbjct: 516 REKLVSPDEAGSLLGPGKNGVTGIVQIAGCDPAV-LTWPFRNDPKAA 561 >UniRef50_C6DZ92 Sigma 54 interacting domain protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ92_GEOSM Length = 672 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 175/388 (45%), Gaps = 16/388 (4%) Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 + + I D ++ + G G+GKS V+ + + + D GE V+ +Y P Sbjct: 192 VASIRIPEDLSRRHILIAGQTGSGKSTVLIQHLAAIQNATRRAIANDFKGELVERFYRPE 251 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 D ILNP+DAR W L+ E ++PD +LIP ED FW + + + Sbjct: 252 KDLILNPIDARGVGWTLFNELKSKPDLTAVTGSLIPPAKGEDRFWSAAAQDVLRGVMAYC 311 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN----LVEEKIEKTAISIRAVLTNYVK 349 R+ ++L L S K+ ++ + + + + +++ K A + AVL +YV Sbjct: 312 YETNKRTNAELWKALTS-KLHEITEMCQATESGHAGYTYIQDASSKQAAGVIAVLMSYVS 370 Query: 350 AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL 409 + + +G PF++R W E+ + +FI++ + ++P +S++ +A + Sbjct: 371 WLEF----AFDG-PFSLRRWA----EEAGDKMVFITNTDEVANIMRPYLSLFADLAGKRF 421 Query: 410 LAMGENR--NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L + E+ + ++ DEL + +LP + +L R G GI + +E +YG + Sbjct: 422 LTLPESTEPEKNIYLILDELGNMQRLPSVKRLLTAGRSKGIVVEVGIPDFTSIESVYGRE 481 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A ++ + ++ + A F + E+E ++S YS R G + + + Sbjct: 482 DAHTIINSCGSKLILNLGDPEAARFFSDLASEEECWESSTYYSISEHDHRGGENHNRQVR 541 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPGPYPA 555 + ++ ++I L + Y LPG PA Sbjct: 542 TRKVIMPAEIMRLAVGSGYFMLPGGNPA 569 >UniRef50_B6ASB1 Conjugal transfer protein, TraB n=2 Tax=Leptospirillum RepID=B6ASB1_9BACT Length = 701 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 112/412 (27%), Positives = 192/412 (46%), Gaps = 31/412 (7%) Query: 184 EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKI-LNPLD 242 E+++F L G+ G+GK+ V+ + ++A RGD +I+D G+F + P+ KI L+P D Sbjct: 157 EVRSFSLVGSPGSGKTTVLNGMVDHAIARGDRALIFDFKGDFTERI--PNGKKIILSPWD 214 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKE-DPFWQGSGRTIF-AEAAYLMRNDPNR- 299 AR L + ++ + LIP+ ++ P W + R I AE LM Sbjct: 215 ARAVRLALGSDVSSEVQARLLSECLIPINPRDTQPMWGNASRAILRAELHRLMAERQGAW 274 Query: 300 SYSKLVDTLL-------SIKIEKLRTYLRNSPAANLVEEKIEKTAISI----RAVLTNYV 348 + +L D LL S ++ + N A+ +V++ KT +S+ A L + + Sbjct: 275 GFHELGDALLADILCPYSDQVVQNLVKRYNPEASRIVQDLTSKTTLSVLIDQSAALGDTI 334 Query: 349 KAIRYLQGIEHNGEPF-TIRDWMRGVREDQKNGWLFI-----SSNADTHASLKPVISMWL 402 R+ ++ G PF ++R ++ G +++N I S T A + V ++ Sbjct: 335 LLSRFDLELKKGGRPFLSLRSYLSGETREKRNPLPVILPVHPDSKTLTSAFVSAVFTLSS 394 Query: 403 SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 SI + RR+WFF DE+P ++P + + L AR G V G Q+ AQ+ + Sbjct: 395 SIVTN--FPDAKPNARRIWFFLDEVPQAGRIPPITDFLVTARSKGCRTVLGFQTPAQVAE 452 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 YGEK + + + F + S + ++ + IGE+E L + + G P G +T Sbjct: 453 TYGEKTLEIWDNATSVKVFLQCVSPEAKKYVSQSIGEREILAFKKSDNIGIAPTHTGHTT 512 Query: 523 GKDMERQTLVSYSDIQSL-----PDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 ER+ LVS + SL +T V + G PA+ L+ ++ PK A Sbjct: 513 NWVDEREKLVSPDEAASLLGPGKNGVTGIVQIAGCDPAL-LTWPFRNYPKAA 563 >UniRef50_D1BL71 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL71_VEIPT Length = 638 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 102/421 (24%), Positives = 187/421 (44%), Gaps = 22/421 (5%) Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLAN----YARQRGD--MVVIYDRSGEF 225 + IG++ I D+E ++ + G G+GKS ++ + N Y+++ D +I D EF Sbjct: 186 LSIGNINIPTDTECKHILVFGASGSGKSVLLSQFLNQINTYSQKYNDKRHYIITDVKPEF 245 Query: 226 VKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTI 285 V + +P D I P D R +W ++ + D+D A+ L +DPFW + I Sbjct: 246 VGKFAEPD-DYIFCPFDKRSISWSIFNDIDDISDYDTFASILFEQEGAKDPFWGLAAGAI 304 Query: 286 FAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI----EKTAISIR 341 FA+ + + R ++ + E L + + P + ++ + T SI Sbjct: 305 FADGLKYL-DLQGRKTNRDILEFFKQSTEYLTEAINSLPPTLITSKQYLNAPDNTFTSIL 363 Query: 342 AVLTNYVKAIRYLQGIEHNGEPFTIRDWMRG--VREDQKNGWLFISSNADTHASLKPVIS 399 A L + +K +L+ N PF+ + ++R R D L++ A+ + P++S Sbjct: 364 ATLASGLKPFMHLKDSTDNNTPFSFKQYIREEYQRTDGTIPNLYLLVPANRQRIMAPLLS 423 Query: 400 MWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQ 459 + + I I L + E++N R++F DE+ +++K+ L +++ + R +G + Q Sbjct: 424 LVMDIMINEALTLPESQNCRLYFIIDEIGSVNKIQLLPDLITKGRSYGISILALTQDPGL 483 Query: 460 LEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE--HLKASEQYSYGADPVR 517 L + YG + S + T+ R A+ A G +E K S Q P+ Sbjct: 484 LREKYGPQVMQSFLNNFGTQIVLRINDATTAKELADNFGVEEIIEYKESIQLPQNGSPIP 543 Query: 518 DGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG--PYPAVKLSLKYQTRPKVAPEFIPR 575 S +D ++L+ S +QSLP Y + G P+ V L + P + F P Sbjct: 544 ---SISQDTTTKSLILPSQLQSLPPFKGYGKILGFNPFNLVIPQLFFSENPNIK-HFDPI 599 Query: 576 D 576 D Sbjct: 600 D 600 >UniRef50_Q21BL2 Putative type IV secretory pathway VirD4 components n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BL2_RHOPB Length = 602 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 102/417 (24%), Positives = 185/417 (44%), Gaps = 30/417 (7%) Query: 177 LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDK 236 +PI R+ E ++F + G+VG GK++ + L + A RGD +++ D G+ + Sbjct: 158 IPIGREREARHFLILGSVGGGKTQTMLNLIDGANARGDGILVLDTKGDMMGGLPAQGDPL 217 Query: 237 ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND 296 ++ P D R WD+ +C + D A IP DP W + + IF ++ Sbjct: 218 LVAPHDRRSLVWDVAADCSIKQDARELAARFIP--PSSDPMWSQAAQEIFVACIVHLQAT 275 Query: 297 PNRSYS-KLVDTLLSIKIEKLRTYLR--NSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 + + ++ +++ +++L + + N A L+ + KT SI +++ + Sbjct: 276 RGQDWGWADLEAVVTADVDQLTVFAKDHNPNALRLLNQPDSKTTQSILTTFQTHMRIVSV 335 Query: 354 LQGI--EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS-MWLSIAIRGLL 410 L + + E F+IR W+ + L + H P +S +W+ ++ GLL Sbjct: 336 LAEAWPDRSAERFSIRAWLHKPIPYRP---LILQ-----HDPGYPELSRIWIG-SMLGLL 386 Query: 411 A-------MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 A + E+R RRVW F DE P L + L R G V G Q AQ+ + Sbjct: 387 ASAVGSPTLSESRQRRVWLFLDEFPQLPPIKQFATFLELGRSKGVAVVIGAQDTAQIRAV 446 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 YG+ A S F + T+ R + + AE + IG++E ++++ + + + V+ Sbjct: 447 YGQDQAKSWFGMTGTKIITRINASEAAEDISRLIGDQEVERSTQSATRTSG--KTSVTES 504 Query: 524 KDMERQTLVSYSDIQSLPDLT---CYVTLPGPYPAV-KLSLKYQTRPKVAPEFIPRD 576 E + +V+ S++ S T V G V +L L Y + PK+ +P D Sbjct: 505 IQREIRRVVTASELASHLGPTKGGVRVLFIGLGEDVYELELPYLSLPKLREPIMPAD 561 >UniRef50_B4WW43 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW43_9SYNE Length = 259 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 E+ S+ A + NY IR+ + ++ +PF+ W + D WLF+ D Sbjct: 26 ERMTASVLATMVNY---IRFYRDMDDGAQPFSFSQW---AKHDNPE-WLFLPIFEDDAEK 78 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 KP++S +A+RG+L+ ENR + DEL L+KL L + E+RKFGG + G Sbjct: 79 YKPMVSAAFEMALRGMLS-NENRWMKTAIVIDELGALNKLGSLNRLTVESRKFGGTLILG 137 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 Q+ AQ++ +YG+ + T+ + AE A IG++E + + ++G Sbjct: 138 TQTDAQIDKVYGQYDTRIILQGTATKLILNCRDEQTAERFAKTIGKQERIDWMKG-THGG 196 Query: 514 DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 R G S +++ LV S++Q+LP L Y+T+ P ++ ++ + + A F+ Sbjct: 197 WIFRHGYSKTENLRETYLVLPSELQALPKLEGYLTIADGTPPARVKVEPKGYLQRAGRFV 256 >UniRef50_Q3SI88 Putative type IV secretory pathway VirD4 components n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SI88_THIDA Length = 784 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 120/485 (24%), Positives = 201/485 (41%), Gaps = 46/485 (9%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 LHDK + + + +A V + L+ +V W++ +++ GR+ Sbjct: 71 LHDKTVAFMQAEHPAALKALEVGPQIAGLLAGGLVFWMVYGDVVIATQDRHIRGRRRLKG 130 Query: 156 PKDVARMLKKDGKDSD-IRIGDL--PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 +A +K +G+ +D +RI PI + E ++ + G VG+GK++ + L AR+R Sbjct: 131 AAALAAWVKDEGEAADGLRIHPKLPPISKSRETRHILIVGGVGSGKTQTLLPLMRAARER 190 Query: 213 GDMVVIYDRSGEFVKSYYDPSI------------DKILNPLDARCAAWDLWKECLTQPDF 260 GD +I+D G+F + PS D I P D+R W + ++ T Sbjct: 191 GDRAIIFDFKGDFTPDF--PSCTARHKGRAIEVEDVIFAPWDSRSTLWAVARDVDTLSAA 248 Query: 261 DNTANTLI--PMGTKEDPFWQGSGRTIF-AEAAYLMRNDPNR-SYSKLVDTL---LSIKI 313 A +I P G P W + R + A L P ++ LV L + Sbjct: 249 REFAARMIVEPGGGSGSPMWANAARQVLVACLVELQSTKPGDWGFADLVAGLTRPVDQLT 308 Query: 314 EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR-- 371 E R Y + A L + + T I+ L +Y+ I L F+IR+W+ Sbjct: 309 EAARRYFPEAVKA-LGDGQQNVTTAGIQINLMSYLAVIFDLARAWPGPGIFSIREWLTEV 367 Query: 372 GVRED-----QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDE 426 G R Q +G + A A L + S +R +++ R++W F DE Sbjct: 368 GARRVKTVILQHDGRFETLARAFNSAVLGLAGQLIKSNLVR------DSKERKLWLFLDE 421 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR-SP 485 P L K+ ++ + R G V G+Q +Q++ IY E S+ ++ T+ + SP Sbjct: 422 FPELGKVETVLSLAAVGRSKGIRVVLGLQDISQVKKIYSEHDTNSIVSMVGTQVIAQVSP 481 Query: 486 SHKIAEFAAGEIGEK--EHLKASEQYSYGADP---VRDGVSTGK-DMERQTLVSYSDIQS 539 A IG++ E L S G P G T K + +R+ +V S++ Sbjct: 482 GETAKYIAENLIGDRDLERLGVSITSGAGRAPGIFTSGGNRTSKWEDKRELVVLPSELLQ 541 Query: 540 L-PDL 543 L PDL Sbjct: 542 LGPDL 546 >UniRef50_B8KYV9 Putative type IV secretory pathway VirD4 component n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYV9_9GAMM Length = 636 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/402 (22%), Positives = 169/402 (42%), Gaps = 42/402 (10%) Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR-----MLKKDGKDSDIRIG 175 V +T + +W+ R+ +S GG QL + +A + KK+ +D + Sbjct: 107 VAAGLTGWTSAWVTRRELAPRSNMWHIGGNQLLSGKEAIAEARRRSLTKKEQRD---ELH 163 Query: 176 DLPIIRDSEI------QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY 229 L + RD + ++ ++G+VG+GKS +++ L + IYD G+F + Sbjct: 164 ALSLHRDWTVSKKLLARHMFIYGSVGSGKSVILKHLLEQVVKLDKKAFIYDIKGDFTSIF 223 Query: 230 YDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEA 289 P+I + P D R WD+ ++ TQ + ++IP FW + + + Sbjct: 224 ERPAI---VCPFDKRSWIWDVGQDVATQTQAAAFSQSIIPPEEGSGAFWASAAQALLEGC 280 Query: 290 AYLMRNDPNRSY-----SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 ++ +++ + LV + L Y AA L+ T S AVL Sbjct: 281 VRELQATKGKNWGWADLAALVARPAEPMAKALSLYYPR--AAALIANPDSNTTSSCMAVL 338 Query: 345 TNYVKAIRYLQGIEHNGEP---FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 N I L +P F++ DW++ E +K + + S D + IS Sbjct: 339 ANGTAVIERLALAWPERKPDCMFSMLDWIKDSYEGRKQ--VIVQSGPD-EVLARSYISAM 395 Query: 402 LSIAIRGLLAMG---ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 +++A+ +++ + R + FF DEL ++ +L + +L R G +Q ++ Sbjct: 396 INVAVPEIISPSLPDDESGRFLGFFFDELSSVGQL-KIEPLLALGRSKGVVACMAVQDWS 454 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEK 500 Q+E +YG+K A + ++ T H I + GE EK Sbjct: 455 QVEKVYGDKTAQAFSGLVGT--------HIICQLQVGETREK 488 >UniRef50_A4JFK6 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFK6_BURVG Length = 818 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 89/369 (24%), Positives = 148/369 (40%), Gaps = 52/369 (14%) Query: 186 QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARC 245 ++ + G VGAGK+ + +L R D V+++D +F Y+ +I I+ D+R Sbjct: 129 RHIMVVGAVGAGKTVFLTQLLAQILARKDRVLLFDIKRDFTM-YFKHAI--IIAATDSRS 185 Query: 246 AAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTI-----------------FAE 288 AWD+ ++ T+ A LI +DPFW + R + F E Sbjct: 186 WAWDIARDVATRQAAQQFAKQLIE--DSKDPFWSAAARALLVGFIVMLVAEKKEDWGFPE 243 Query: 289 AAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYV 348 A +++N P ++ +E + AAN + A SI+ + Y Sbjct: 244 LADVLQNTPESDLPAIMKEYSPEAMEIVAEAKGRDAAAN-----PNQAAKSIKMTMQTYC 298 Query: 349 KAIRYLQGI---------EHNGEP-----FTIRDWMRGVREDQKNGWLFISSNADTHASL 394 AI L + G+P F+ +WM + D ++ + + + Sbjct: 299 SAIYDLATAWKDEPPDPNDPEGKPKRRPRFSAVEWM--MNPDTRHRQVILQGDKTVEPLT 356 Query: 395 KPVISMWLSIAIRGLLAMGENR---------NRRVWFFCDELPTLHKLPDLVEILPEARK 445 + IS SI + A+ E R + +W FCDELP L K+ + R Sbjct: 357 RAYISQIFSIVSSRIGALPEARTVPPRTDGKSNAIWLFCDELPALGKIEAFDAAITLGRS 416 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 +V G+QS QL +IYG++ A+S M T R A +G+KE + Sbjct: 417 KDVRWVAGLQSIEQLHEIYGKEKASSWVANMGTIVVGRVAPGATATQVKDMVGKKEVERP 476 Query: 506 SEQYSYGAD 514 + S GA+ Sbjct: 477 NWSASGGAN 485 >UniRef50_B4B5T3 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5T3_9CHRO Length = 641 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 159/406 (39%), Gaps = 70/406 (17%) Query: 192 GTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGEFVKSY-------------YDP--SID 235 G G+GK+ VI R A ++G +++YD+ G+ V+ + + P S Sbjct: 145 GAPGSGKTASVIDRAIESAMRQGHSILVYDKKGDQVRLHAALATRYGYSVEVFAPGYSYS 204 Query: 236 KILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN 295 ++NPLD D F +++ T +K + F++ +G + A L++ Sbjct: 205 GVINPLDFVTGPEDTTMAGEIGKIFTSSSRT---GESKGNEFFETAGEML---ARGLVQL 258 Query: 296 DPNRSYSKLVDTLLSIKIE------------------KLRTYLRNSPAANLVEEKIEKTA 337 +Y L I++ K+ ++ S + + + EKT Sbjct: 259 AKASNYRDLAQVYAFIQLPNFVERIYHSIYRPDKHPLKMNPWIAPSFSQLMSSKDAEKTV 318 Query: 338 ISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRG----------VREDQKNGWLFISSN 387 I+A A F RD +R ++E Q LF + Sbjct: 319 AGIKATAEMVYSA-------------FIQRDLLRAFIGKSTIPIKLKEKQ---ILFFQLD 362 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + L P+I+ L + I + + + R +F DE P++ +LP V + E R G Sbjct: 363 DERRTVLAPLIAAALHLCI--VSNLSQKRTNPFCYFLDEFPSIGRLPRTVNYVNEYRSNG 420 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 G V GIQS QL D YGE+ ++ ++T F + AE + GE E + S Sbjct: 421 GVPVLGIQSLEQLYDTYGERQGKAIASALSTHVLFYPGDYNTAEQYSKRYGETEVVIRSR 480 Query: 508 QY--SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 SYG + + + ++ L+S +I P C +T P Sbjct: 481 STGNSYGGSQTSRSTNWSEQIHKKPLLSPDEILRFPQGECVITSPA 526 >UniRef50_B2FKA6 Putative type IV secretory protein conjugation protein TraD n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FKA6_STRMK Length = 624 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/315 (23%), Positives = 143/315 (45%), Gaps = 20/315 (6%) Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRR-LANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 DL + + ++ + G+VG+GKS +++ L R+R + +YD G+F + P I Sbjct: 170 DLLLSKKHWARHVLITGSVGSGKSVILKHILEQLTRKRDAKLFLYDIKGDFTSIFKRPII 229 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR 294 ++P DAR WD+ + T A +LIP G FW + + + ++ Sbjct: 230 ---VSPFDARSHVWDVAADVRTPTQAAAFAASLIPEGDGNAKFWSMAAQDLLIGCVRELQ 286 Query: 295 ND-PNRSYSKLVDTLLSIKIEKLRTYLR-NSP-AANLVEEKIEKTAISIRAVLTNYVKAI 351 N P + L+ ++ +R + P A LV + +T S+ + L + + I Sbjct: 287 NTRPGEWEWPDLAALVRRPAAEMAAGMRPHYPRGAALVRDPESQTTSSVLSSLGGFTRLI 346 Query: 352 RYLQGI--EHNGEPFTIRDWMRGVREDQKNG--WLFISSNADTHASLKPVISMWLSIAIR 407 L + F++ +W+R D NG + + S D + K I+ +++A+ Sbjct: 347 DDLATAWPKVGKRRFSMTEWIR----DDYNGRKQVIVQSGPDPTLT-KAYIAAMINVAVP 401 Query: 408 GLLAMG---ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY 464 L+ G + R ++F DEL + +L ++ +L R G + +Q ++Q+E +Y Sbjct: 402 DLIGPGLPDDEGGRGLYFVFDELTSAGRL-NIDPLLALGRSKGVVAIMAVQDHSQVELVY 460 Query: 465 GEKAAASLFDVMNTR 479 G+K A + ++ T Sbjct: 461 GDKTAQAFSSLVGTH 475 >UniRef50_A5ESM8 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESM8_BRASB Length = 573 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 78/337 (23%), Positives = 144/337 (42%), Gaps = 21/337 (6%) Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKIL--NP 240 +E N + G G+GKS VIR A RG+ +I+D G+ + ID+IL P Sbjct: 164 AEASNILVIGDQGSGKSAVIRGWAEQILARGERSIIHDAKGDILAC---APIDEILLVAP 220 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND--PN 298 DAR WD+ ++ + A L+P G++ + W + I + A ++ + + Sbjct: 221 HDARGWTWDIGRDVINAQGAREVAEKLVPSGSELESMWSNGAKAILSGAIEALQRERKTD 280 Query: 299 RSYSKLVDTLLSIKIEKLRTYLR--NSPAANLVEEKIEKTA--ISIRAVLTNYVKA---I 351 ++ L + E LR L +SP+ +L+E + A ++ +LT +V A I Sbjct: 281 WGWADLFKFVFKSPKE-LRAALEAAHSPSVHLIEIDADGVANRTTLSLMLTLWVAALTTI 339 Query: 352 RYLQGIEHNGE--PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL 409 R L E + + F++RDW+ + + + NA+ + + + + L Sbjct: 340 RPLAQAEASNKECSFSVRDWLSEQSRLPRT--IILQHNAEYPLLSTAISGLLVDVVCGKL 397 Query: 410 LAMGENRNRRVW--FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L+ + W DELP L +L ++L R+ G + Q + Q+ +Y Sbjct: 398 LSPSTPKRDCPWLHLILDELPVLGRLEQFPKLLNVGREKGVAAIVATQDWEQILKLYQRY 457 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 AA+L + R + + E G+ + ++ Sbjct: 458 DAATLEARFKIKVVCRLGTSETRERVVGKYAGRRTIE 494 >UniRef50_A7BSA0 TraG/TraD family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSA0_9GAMM Length = 667 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 111/484 (22%), Positives = 191/484 (39%), Gaps = 62/484 (12%) Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRL--ANYARQRGDMVVIYDRSGEFVKSYYDPSIDKIL 238 RD F L G +G+GK+E + N+ + V+I+D G++ + Y D I Sbjct: 124 RDFTKTVFAL-GGMGSGKTEFFFSILNENWGYRHFKRVIIHDPKGDYTEKLYRSDQDYIF 182 Query: 239 NPLDARCAAWDLWKECLTQPDFD-NTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP 297 NP D R AAWD+W + P + LI T+++ F+ S + E Y M Sbjct: 183 NPYDKRGAAWDIWADMHAYPVLIVSFLKNLIESQTQKEDFFSSSAVNVLKE--YFMETHF 240 Query: 298 NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 + V+ I ++K+ TY + S + T SI + + ++ +R L I Sbjct: 241 SAKGKSSVEK-WRILLDKIDTYRKQSAG--------KPTEGSIYSTIALAIETLRLLAFI 291 Query: 358 EHNG--EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN 415 + F+IR ++ LF+ +N A L + +LS+ LL+ + Sbjct: 292 ATTNPKKQFSIRYFL-----SSSGSKLFLLNNPAYSAPLNALFVGFLSVITEALLSQPDT 346 Query: 416 RNRRVWFFCDELPTLH-KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 DE +L ++L + R GG + G Q + + + +S F Sbjct: 347 TGNLSLLVLDEFLSLKFNQETKTKVLTQIRSKGGALLLGAQFLPKENKLEQQLLDSSRFA 406 Query: 475 VMNTRAFFR-----SPSHKIAEFAAGE-------IGEKEHLKASEQYSYGADPVRDGVST 522 ++ FFR + +H F E I E E+ S +S G +G+S Sbjct: 407 LI----FFRLSDIETVNHIQEMFGEIEYTHYENSINEGENSNWSIPFSIGGGK-NEGMSI 461 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLP-------GPYPAVKLSLKYQTRPKVAPEFIPR 575 ++++ + +QS+P +P G P V+L KV F+ R Sbjct: 462 NTSLQKRKFIKPEMLQSMPQYHHITFIPEDNIIYLGYTPLVQLE-------KVNRAFVQR 514 Query: 576 DINPEMENRLSAV--LAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDK 633 D+ + + V L +++ R E P V + +T+ Q P +P ND Sbjct: 515 DLTLFYQKPFNVVGDLPSQKRNERS-----ETQKPRKVVAK-LTKTPQSIVPKTPEENDI 568 Query: 634 KSDS 637 + DS Sbjct: 569 QVDS 572 >UniRef50_B4WW44 Putative uncharacterized protein n=2 Tax=Synechococcus sp. PCC 7335 RepID=B4WW44_9SYNE Length = 275 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 27/195 (13%) Query: 106 EQLWSAFVLAAVVALVIC---LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARM 162 +Q + +++A + L I L F ++ ++L G+ EV ++ R Sbjct: 79 QQRRTFYIIAGAIILFISVPPLPAFILLLFLLKPAGRVIRGQEVVSA-------AEMQRQ 131 Query: 163 LKKDGKDSD------IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM- 215 L K K++ + IG + + D E G+ G+GK++ I+RL R R D Sbjct: 132 LDKRQKETPMPQLPLLEIGGVQLPNDLENLGVFAIGSPGSGKTQAIKRLLQTLRDREDFR 191 Query: 216 VVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED 275 V+++DR+GE ++S+Y+ DK+ NP DAR +W E QP + A ++P+ ED Sbjct: 192 VMVFDRNGELMESFYNEYTDKLFNPRDARLVSWSHLSEG-QQP--ETMAVAMVPLPQNED 248 Query: 276 PFWQGSGRTIFAEAA 290 + FA+AA Sbjct: 249 -------KAFFAQAA 256 >UniRef50_A6BIV1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A6BIV1_9FIRM Length = 436 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 86/410 (20%), Positives = 164/410 (40%), Gaps = 57/410 (13%) Query: 177 LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDPS 233 +PI ++ L G +G GKS + R D+++I+D G+F K +Y P Sbjct: 43 IPIGEHILSRHMLLLGGIGTGKSNAFNHIIRNTRSNLTNEDVMIIFDTKGDFYKEFYRPG 102 Query: 234 IDKILNPLDARCAA------WDLWKECLTQPDFDNTANTLIPMGT---------KEDPFW 278 I N DAR W++++E D ++ + PF+ Sbjct: 103 DVVISN--DARATGGSEADYWNIFEEVTID---DRVEENILEIAKGFFAEKLEHTTQPFF 157 Query: 279 QGSGRTIFAEAA-YLMRNDP------NRSYSKLVDTLL-SIKIEKLRTYLRNSPAANLVE 330 + + +FA +L+RND N+S ++++ I ++ L + + + Sbjct: 158 PNAAKDLFAALMLHLVRNDKFADKRNNKSLRSYLNSITPHIMVDILNQHSDLKAMQSYIY 217 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNG-WLFISSNAD 389 ++ + + A L ++ I ++ + G ++R +R +K G +F+ + Sbjct: 218 DEKSGQTLGVMAELQQMMREI-FIGNFQKKG-GLSMRKLVR-----RKGGRVIFVEYDLG 270 Query: 390 THASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 L P+ + + +AI+ L N V+FF DE + L + + + R G Sbjct: 271 IGGMLMPIYRLLIDLAIKEALCRTSNEGN-VYFFIDEFRLVPHLEHIDDGVNFGRSLGAK 329 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK----- 504 + GIQ+ Q+ YGE S+ T FR ++G +E++K Sbjct: 330 FFVGIQNIDQVMAAYGEYTGRSILSGFGTTFAFR----------VNDVGSREYIKNLFGR 379 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP 554 +Q SY + G++ + + +V DI +LP V+ P P Sbjct: 380 NIKQQSYMSKVQNRGIA--EQLREGYVVEDDDINNLPVGEAIVSAPSGEP 427 >UniRef50_C2W8G4 Type IV secretory pathway VirD4 component n=2 Tax=Bacillus RepID=C2W8G4_BACCE Length = 435 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 77/357 (21%), Positives = 139/357 (38%), Gaps = 58/357 (16%) Query: 189 CLH-----------GTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDPSI 234 CLH G++G+GKS + + R++ D++V +D G++++ +Y P Sbjct: 43 CLHPSLFEKHILTLGSIGSGKSNTMYHIVKAVREKMLNDDVIVFFDAKGDYLEKFYCPGD 102 Query: 235 DKILNPLDA--RCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYL 292 I N L W+++ + + P GT + S +F A Sbjct: 103 LVISNSLTPPPGHTNWNIYNDIMYTPKEKREETIREIAGTLFKSEIEKSQSPVFGMGA-- 160 Query: 293 MRNDPNRSYSKLVDTLLSIKI------------EKLRTYLRNSPAANLVEEKI------- 333 L+ +L++ I KL ++R++ +L + Sbjct: 161 ---------RDLLSGILTVHIRQIEEGKETWDNHKLANFVRSADDVDLYNLFLPYEDLDW 211 Query: 334 -------EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISS 386 + A + +LT Y + G F+IR+ + +++ K +F+ Sbjct: 212 LRSYIAEDGGATTQSFLLTLYQTVMNVFNGTFGQPGDFSIRETI--IKKGGKA--IFLEY 267 Query: 387 NADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKF 446 + + L+PV ++ L +A++ +L E R V+F DE P + KL + L R Sbjct: 268 DLSSGNILEPVYTVLLDLAMKEVLGRTE-RTGNVYFVLDEFPLIPKLNYMDNALNFGRSL 326 Query: 447 GGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 G + GIQ+ AQ+E YGE S+ T FR K F + G + L Sbjct: 327 GVKVIAGIQNIAQVEHRYGEAYGRSILSGFGTVFAFRLFDSKSRSFVSDRHGSVKKL 383 >UniRef50_B0RB09 Putative conjugal trasnfer protein n=2 Tax=Clavibacter michiganensis subsp. sepedonicus RepID=B0RB09_CLAMS Length = 675 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 86/386 (22%), Positives = 155/386 (40%), Gaps = 40/386 (10%) Query: 192 GTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCA-- 246 G +G GK+ I L R D++V++D G++ ++++ P I L A Sbjct: 54 GGIGTGKTVGISALVASVRASMTADDVMVVFDTKGDYHETFHRPGDAVIAATLADEFAGQ 113 Query: 247 -AWDLWKECLTQPDFDNTANTLIPMGTK----------EDPFWQGSGRTIFAEAAYLM-R 294 +W+L++E P + + M + ++ ++ + R +F M R Sbjct: 114 VSWNLFEEFRALPPGRLPEDEIFEMCSGLFSRLIADAGDNAYFANAARDVFTALVTAMYR 173 Query: 295 NDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANL--VEEKIEKTAISIRAVLTNYVKAIR 352 RS + + + ++ L A+L I K + +++ + Sbjct: 174 ESEERSNCDIRMIVGGMGTSEMHALLDRPENADLRGARHYIAKEGSNSTMATMAFMQQVI 233 Query: 353 YLQGIEHNGEP--FTIRDWMR--GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRG 408 G P F+IR ++R G R LF+ + + ++L PV + L +A++ Sbjct: 234 QESFRSSFGRPGDFSIRAFLRAKGAR------ALFLEYDIASGSTLAPVFTTMLDVAMK- 286 Query: 409 LLAMGENR-NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 AM R RV+F DE L +L L + + R G ++ G Q+ Q++++YG + Sbjct: 287 -EAMSRRRAGGRVFFVLDEFALLPELTHLSDGVNFGRSLGLRFIVGTQNVKQVQEMYGPE 345 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 AAS+ + FR F G L + G+ +R+ V TG Sbjct: 346 MAASVLSAFGSVFAFRLYDGDSRRFVGDRFGANRKLTRFDASVRGSG-LREEVITG---- 400 Query: 528 RQTLVSYSDIQSLPDLTCYVTLP-GP 552 +V D+ SL TC +P GP Sbjct: 401 --AVVEDWDLSSLGVGTCIAAIPDGP 424 >UniRef50_A8ZL40 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZL40_ACAM1 Length = 575 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 3/170 (1%) Query: 382 LFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILP 441 +F + + P++++ + + I+ L R+R F DE L LP E++ Sbjct: 325 IFFELDGQAKKATAPLVAVAIHLLIQRNLNEDTERDRPFGVFLDEFARLM-LPSFEEVVS 383 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 R +G +QSY+Q + Y + + S+FD +T+ F+S S+K+ E + ++GE Sbjct: 384 LDRSYGFYSFVSMQSYSQPKIKYQSETSESIFDNTSTQFIFKSGSYKVREDLSADLGEYT 443 Query: 502 HLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 S+ SYG + + S + +++ L++ SDI+ L T PG Sbjct: 444 KHYHSKSRSYGK--MGNSRSRNEQEKKKRLITASDIKRLKKGEFICTNPG 491 >UniRef50_A6GWX0 Putative mobilization protein, TraG family n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6GWX0_FLAPJ Length = 645 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 28/298 (9%) Query: 229 YYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAE 288 + P + +NP+D L K + N L+P K+ FW + + I A Sbjct: 271 FKQPLLSDRVNPIDPNY----LGKSAIAMEYAQVILNNLLPESIKKPDFWISNAKMILAG 326 Query: 289 AA-YLMRNDPN-----RSYSKLVDTLLSIKIEKL-RTYLRNSPAANL---VEEKIEKTAI 338 YL + P + S ++ + + + IEK+ + Y A+L +E E+T Sbjct: 327 VIWYLRKEHPKYCTLPHAISLILHSQIDVLIEKISQDYEAGGMVASLRESIERGAERTVA 386 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTI---RDWMRGVREDQKNGWLFISSNADTHASLK 395 + + L N + + ++ + F I D + + +L + +++ + Sbjct: 387 GMLSTLQNALSGL-------NSHDIFWILSANDVDLHLNNKENPTFLCLGNDSTLPTTYT 439 Query: 396 PVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 P IS+ +S+A+R M + ++ DE PT+ +P++ +I AR +FG+Q Sbjct: 440 PAISLIISVALR---QMNQPHQQKSVVLLDEAPTIF-IPNIEQIPATARSNKIATIFGVQ 495 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 +AQL D YG + A + + + F R + K AE +K+ + S+ G Sbjct: 496 DFAQLADKYGNEKAQVIISNLGNQFFGRITNGKTAEMVQNLFSKKDEIFISKNDGTGT 553 >UniRef50_Q7NIZ2 Glr2040 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NIZ2_GLOVI Length = 538 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 129/321 (40%), Gaps = 34/321 (10%) Query: 203 RRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDK--ILNPLDARCAAWDLWKECLTQ-PD 259 RRL YAR G V ++ P + + + NPLD +A D E Q + Sbjct: 126 RRLFAYARHLGYTVQVFA-----------PGLPQSAVFNPLDLLVSAED--SETARQLAE 172 Query: 260 FDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSI-------- 311 N L ED F+ +G + AEA L +V +LLS+ Sbjct: 173 VLNRNFKLAQQKGGEDAFFGPAGDQL-AEAVLLTAKASPYPDLLMVQSLLSLDQLPQRLQ 231 Query: 312 KIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR 371 E L ++++ S L EKTA SI A + Q P I + Sbjct: 232 TAEHLSSWVKASYGQFLSAASSEKTAASIVATASALFTRFLKPQVARSFAGPSAIDFDLS 291 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLH 431 G + L + + + P+++ L + I+ E R + DELPTL Sbjct: 292 GKK------LLVLGVDRTRRDVVLPLVATLLHMLIQ--FNTHERRTEPLVLALDELPTLF 343 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 LP LV L E R+ G V G+Q+ AQLE YG++ A ++F T+ F A+ Sbjct: 344 -LPALVNWLNENREDGLVSVLGLQNLAQLERTYGKETAQAIFGACATKFLFNPGEKDSAQ 402 Query: 492 FAAGEIGEKEHLKASEQYSYG 512 + + +G++ L+ S + G Sbjct: 403 YISDMLGQESILQRSISRNTG 423 >UniRef50_A6NS50 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS50_9BACE Length = 448 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 40/321 (12%) Query: 178 PIIRDSEI--QNFCLHGTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDP 232 PI D E+ +NF G G GK+ I L + D+ V++D +F +Y P Sbjct: 38 PIQLDEELLSRNFLFLGCSGTGKTNAILLLLDRLFSTMGPEDVAVVFDAKRDFFNRFYTP 97 Query: 233 SI-DKILN---PLDARCAAWDLW---------KECLTQPDFDNTANTLIPMGTKEDPFWQ 279 D +L+ L W+L+ +E L Q +NT G+ + PF+ Sbjct: 98 ERGDLVLSGSPALRDVTVNWNLFPELTAGGLDEELLIQSINENTKALFAGRGSTQQPFFV 157 Query: 280 GSGRTIF------------AEAAYLMRNDPNRSYSKLVDTLLSIKIEKLR-TYLRNSPAA 326 + R+I A+ A+ R NR+ + D + + +L +Y Sbjct: 158 NAARSIAGSWLLAMLRSAKADPAFGDRECNNRTLRRYFDQAGAKQYSELAASYPDLGGIT 217 Query: 327 NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGW-LFIS 385 + + A+ + L++ V+ + QG+ F+IR ++R QK G L+I Sbjct: 218 KYLGDGKNLQALGVMGELSSMVQEL--FQGVFAQKGDFSIRQFIR-----QKGGRVLYIE 270 Query: 386 SNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARK 445 + +L P+ S+ + A + L+ E V+ DEL L L L + + R Sbjct: 271 YDLAVGEALAPIYSLLMDQAFKEALSQ-ERTKGNVYLVVDELKLLPYLQHLDDTVNLGRS 329 Query: 446 FGGCYVFGIQSYAQLEDIYGE 466 G + +QS +QL +YGE Sbjct: 330 MGVKVIASLQSLSQLYALYGE 350 >UniRef50_A4J2S8 TRAG family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2S8_DESRM Length = 682 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 85/376 (22%), Positives = 142/376 (37%), Gaps = 40/376 (10%) Query: 164 KKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDR 221 K +G+ + IG + I + I G GAGK+ V+ + + A G +VI D Sbjct: 181 KLNGRILRVIIGRMAIAAHTAI-----FGATGAGKTFGWVLPNIVSTAHD-GWSMVISDP 234 Query: 222 SGEFVKSY------YDPSIDK----------ILNPLDARCAA--WDLWKECLTQPDFDNT 263 GE V Y+P I ILN D + W+ E +F Sbjct: 235 KGELVAGKWNASGEYEPGIADWLKKQGYEIIILNFKDPSQGSHRWNPLFEAKDDAEFRQV 294 Query: 264 ANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR-----NDPNRSYSKLVDTLLSIKIEKLRT 318 +I KE+PF+ G +F L R D R + + V +LLS +EKL Sbjct: 295 CEAMILSAGKENPFFAGGESNLFTALMGLTRYGSFLKDEMR-HMRTVLSLLSWPVEKLDE 353 Query: 319 YLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG--EPFTIRDWMRGVRED 376 + + + + + N+ ++ + +G T + + Sbjct: 354 TFEKEYRSGQIPVYFYEKWRAAAGMFNNFATGVQSKVAVMTDGPLAALTAGHDINLLALS 413 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR----VWFFCDELPTLHK 432 +K LF T LKP+++ + + + L+ E N R V F DE + + Sbjct: 414 KKKTALFCI--LPTIGDLKPLLTAFYYLLFKRLVEYAEANNNRLPIPVRFILDEFANIGR 471 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 +P+ + R G CY + IQ+ QL +YG A + + R R K A + Sbjct: 472 IPNFSNRISFDRGLGICYNYIIQNRTQLNSLYGSDVAETFLGNTDIRMALRVNDDKTAGY 531 Query: 493 AAGEIGEKEHLKASEQ 508 ++G + SE+ Sbjct: 532 FTRQLGSADVWDISER 547 >UniRef50_UPI00019793E0 cag island protein,DNA transfer protein (virD4-like) n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019793E0 Length = 681 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/325 (20%), Positives = 140/325 (43%), Gaps = 35/325 (10%) Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR-NRRVWFFCDELPTLHKLPDL 436 KN L+I +LK +I + L + L+ R + R++ DE K+P L Sbjct: 309 KNITLYIKIAQTDIDTLKSLIRVLLESIAKNLMTKESKRLDERIYLVLDEFIRFGKMPFL 368 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 +E+ R +G ++ QSY ++ YGE ++ D + + F+ AE + + Sbjct: 369 LEMPALCRSYGIVPLYITQSYGLIKKYYGEDDLKTMTDTIAFQILFKMNDADSAENVSKQ 428 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG-PYPA 555 IG ++ + + +S + G ++ +E L++ DI ++P+ + + G Sbjct: 429 IG--KYTREARSHSTKDGAIAFGGTSSYSLEGTELITAQDILNIPNDEIIILVSGHKAKP 486 Query: 556 VKLSLKYQTRPKVAP-----EFIPRDINP-EMENRLSAVLAAREAEGRQMASLFEPDVPE 609 +K+ Y + K + +F P + P E+EN+ + ++ +E + P P+ Sbjct: 487 IKIKAAYYFKEKDSLRKLNWKFDPTNGKPIEIENKQTQIIDMKETPQEAQPT---PPNPQ 543 Query: 610 VVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISES 669 + Q +Q Q+ P I++++ +Q++K EE+ + + E Sbjct: 544 AIQNTQEPQ-QQAQESQEPQISEQE------------QQDIKQAQEEQALYEYEKALQEQ 590 Query: 670 GEVVDMAAYEAWQQENHPDIQQQMQ 694 EA + ++ D+Q++MQ Sbjct: 591 ---------EALKDKSQEDLQKEMQ 606 >UniRef50_C2HF17 Putative uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HF17_PEPMA Length = 432 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 85/379 (22%), Positives = 155/379 (40%), Gaps = 62/379 (16%) Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS----EVIRRLANYARQRGDM 215 + LK +G + D ++ + D ++ + G+ G+GKS +I++L D+ Sbjct: 22 SNFLKFEG-EKDGKMASFTMSEDQLSKHLLMLGSTGSGKSTLFFHIIKQLKAQMTNE-DV 79 Query: 216 VVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED 275 ++I+D G++++ +++ D ++ + + W+++++ L D T + I E Sbjct: 80 MIIFDTKGDYIQRFFENG-DLFIDNITDTSSKWNIFRDILA----DGTDDEHIKQNCNE- 133 Query: 276 PFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIK---------------IEKLRT 318 +++F E N PN + L LLS+ +LR+ Sbjct: 134 -----ICKSLFKERVKNTTNAFFPNAASDVLSSILLSLTRAGVQDKNVRKKMFYNNELRS 188 Query: 319 YL----RNSPAANLVEEK--------IEKTAISIRAVLTNYVKAIR--YLQGIEHNGEPF 364 L N A L K I + VL+ +R ++ G F Sbjct: 189 LLDSCDENKVKAMLASHKDLVAVNSYISYPGPQSQGVLSEMFSVVRDIFVGNFAKKGN-F 247 Query: 365 TIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN-RNRRVWFF 423 +IR+++R ++ LFI + SL P+ + A++ AM N + V+ Sbjct: 248 SIRNFVR----NKGGKTLFIEYDLAKGNSLTPIYRLCFDQALKE--AMSRNQKTGNVYLI 301 Query: 424 CDE---LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 CDE +P L + D V R G + GIQS QL DIYGE A ++ +T Sbjct: 302 CDEFKLIPLLEHIEDGVNF---GRSMGLKILAGIQSIEQLVDIYGESRAMNIMAGFSTLI 358 Query: 481 FFRSPSHKIAEFAAGEIGE 499 FR+ E+ + G+ Sbjct: 359 SFRTNDMASREYVSNLYGK 377 >UniRef50_A8ZPA8 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPA8_ACAM1 Length = 555 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 15/175 (8%) Query: 382 LFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILP 441 L I N L P I M+ I L + + R + FFCDELP L LP + L Sbjct: 313 LIIGLNRAYKEVLSPSIGMFAHAVIE--LNLTQPRETPLAFFCDELPAL-TLPKIKNWLS 369 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR----SPSHKIAEFAAGEI 497 E R+ G C + G QS QL + YG++ A ++ T+AF + +H++A++ G+I Sbjct: 370 EGREDGFCGILGFQSVHQLIERYGKEGAEIIYTGSPTKAFMNPNNINVAHQMAKW-TGDI 428 Query: 498 GEKEHLKASEQYSYGADP-VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 LK+ + G+ V D V +E ++I +P T + PG Sbjct: 429 EVDYTLKSRGRNKGGSSSNVSDQVKVKLALE------ATEINRMPQGTALMVSPG 477 >UniRef50_D2LPL0 Type IV secretory pathway VirD4 protein-like protein n=5 Tax=Aciduliprofundum boonei T469 RepID=D2LPL0_9EURY Length = 602 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 87/412 (21%), Positives = 166/412 (40%), Gaps = 61/412 (14%) Query: 192 GTVGAGKSEVIRRLANYARQRGDMV-VIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDL 250 G G+GK+E+I+++ Q+ D V VI+D G++ +++ + I ++ AW++ Sbjct: 182 GAPGSGKTELIKQVIYQFPQKRDYVWVIFDPKGDYYEAF--GTERDITLSVNGSSYAWNI 239 Query: 251 WKECLTQPDFDNT-----ANTLIPMGTK--EDPFWQGSGRTIFAEAAYLMRNDPNRSYSK 303 + E PD T A + P+ + ED FW + + + + ++Y+K Sbjct: 240 FWEI--DPDRATTDVIEIAKEIFPIEERGGEDKFWVVTSQQLLSAFILTFYRQALQTYTK 297 Query: 304 --------------------LVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAIS-IRA 342 +D + + IE+ L N V E I A+ Sbjct: 298 YFSGKVDRERLKEFLPTNEDFMDFINQLTIEQAYNLLVNQEDLRSVAEYINPQAMKQASG 357 Query: 343 VLTNYVKAIR--YLQGIEHNG--EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 V +N+ I ++ +IRD++ E+ + LFI N +T ++ P+ Sbjct: 358 VWSNFYSRINEIFIGDFYKTAGKRQMSIRDYI----ENPQGRKLFIEYNVETGEAVAPIF 413 Query: 399 SMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 + + AI+ A NR + +F DE + KL E++ R + + G Sbjct: 414 RLLVDRAIKYSFARENQYNRIGEPRKKYFVIDEFQLIPKLKRYQELVNFGRSYYITSIIG 473 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEK-------EHLKAS 506 IQS AQ+ + YG+ +A ++ R+ ++ IG+K +H++ Sbjct: 474 IQSIAQVIEKYGKDSANAVVAGHAYLFALRAYDSASSQLIRSRIGKKQVWQREPQHIQVQ 533 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL 558 + Y V D ST + +S ++++P C + P + V L Sbjct: 534 GRGVY----VADKYSTTEYFP----ISEEHLRTMPVGQCIIVTPDGFREVNL 577 >UniRef50_A6UMU5 TRAG family protein n=5 Tax=Rhizobiales RepID=A6UMU5_SINMW Length = 699 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 80/385 (20%), Positives = 159/385 (41%), Gaps = 36/385 (9%) Query: 198 KSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQ 257 K EV + A Y RQ G V ++ E SY NPLD + + Sbjct: 165 KGEVFKATAGYRRQNGSQVFLFAPGSEKTNSY---------NPLD-----FIRPERGNRT 210 Query: 258 PDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYLMRNDP---NRSYSKLVDTLLS--I 311 D N A+ L+P T+ E+ WQ + + + A + P +R V++ + + Sbjct: 211 TDIQNIASILVPENTESENSVWQATAQQVLAGVISYITESPFYKDRRNLAEVNSFFNSGV 270 Query: 312 KIEKLRTYLRNSP---AANLVEEKIEKTAISIRAV---LTNYVKAIRYLQGIEHNGEPFT 365 ++ L Y++ + VE A+S RA L + KA+R + E Sbjct: 271 DLQALMKYIKEKEPYLSKFTVESFNSYVALSERAAASALLDIQKAMRPFKN-ERIVAATN 329 Query: 366 IRDW-MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFC 424 + D +R ++ ++ ++++ N L+P++++++ + L + + V+F Sbjct: 330 VTDMDLRAMK--RRPISIYLAPNITDITLLRPLLTLFVQQVMNILTLEHDPNSLPVYFLL 387 Query: 425 DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS 484 DE L ++ +++ LP + F IQ L++IYGE + SL + + Sbjct: 388 DEFRQLKRMDEIMTKLPYVAGYNIKLAFIIQDLKNLDEIYGETSRHSLLGNCGYQLVLGA 447 Query: 485 PSHKIAEFAAGEIGEK--EHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD 542 AE+ + +G++ + S P R V + + + L+ +++ +P+ Sbjct: 448 NDQATAEYVSRALGKRTIRYQSESRTIELMGLPRRTKV---EQIRERDLMMPQEVRQMPE 504 Query: 543 LTCYVTLPGPYPAVKLSLK-YQTRP 566 + + G P L+ +QT+P Sbjct: 505 NKMILLIEGQRPIFGEKLRFFQTQP 529 >UniRef50_B4WVQ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WVQ4_9SYNE Length = 581 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 3/136 (2%) Query: 393 SLKPVISMWLSIAIRGLLAMG--ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 +++ V+S ++ I L++ R ++ DE+P+++ P++ E L E RK+G C Sbjct: 342 NIRLVVSPLIASVINALVSRNVLHGRKEPLFLSLDEMPSMY-FPEIAEWLSEKRKYGLCT 400 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 G QS QL YG+ A ++ T+ FF S + A+ + +GE++ + ++ + Sbjct: 401 QIGYQSLGQLRKTYGKDQADVIYTNTATKFFFNPQSLESAKTFSETLGEQDVVYKTKNRT 460 Query: 511 YGADPVRDGVSTGKDM 526 YG R T K + Sbjct: 461 YGRPRTRTEHRTKKRL 476 >UniRef50_A6L5Y8 Mobilisation protein C n=20 Tax=Bacteroides RepID=A6L5Y8_BACV8 Length = 542 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 40/316 (12%) Query: 185 IQNFCLHGTVGAGKSEVIRR--LANYARQRGDMVVIYD-RSGEFVKSYY----------- 230 NF ++G G+GK++ I + + Y R G IYD + ++ ++ Y Sbjct: 101 FSNFLVYGGAGSGKTKSIGKPLMEQYIRS-GFAGFIYDFKDFDYTRTAYNLIRKHGYPHE 159 Query: 231 -------DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGR 283 D + NPLD R ++ + ++ L+P +K+D ++ G+ Sbjct: 160 FYYVNFTDMNRTYRFNPLDRR----NIKDRTMLMQLMEDVLGALMPPTSKQDEWYTGALG 215 Query: 284 TIFAEAAYLMRNDPNR-SYSKLVDTLLSIKIEKLRTYLRNS------PAANLVEEKIEKT 336 + A L P + +V+ ++ +L+ +L+ + A L E EKT Sbjct: 216 ILNGVAYRLWDEFPECCTLPHIVNFVIKADTGQLQEFLKLNDISAMMAGAYLKAEGSEKT 275 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 S + L+NYV + + I + T D+ + + + IS+N T + + P Sbjct: 276 QASYVSTLSNYVAKLATNENICY---VLTGNDFDFNLIDPEHPKLFAISNNYATESVISP 332 Query: 397 VISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 VI+M +SIA R ENR V F DE+ T K+ D ++ R++G ++ QS Sbjct: 333 VIAMVMSIASRSFSM--ENRVPFV-FILDEMTTF-KVRDFEKLPSVLREYGAAFLLLTQS 388 Query: 457 YAQLEDIYGEKAAASL 472 A+LE +Y + +S+ Sbjct: 389 GAKLEKLYSKLDRSSI 404 >UniRef50_B7KK02 Transfer complex protein TrsK-like protein n=4 Tax=Cyanothece RepID=B7KK02_CYAP7 Length = 569 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 29/250 (11%) Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 L P+I+ L + + + R+ ++ DE+PTL+ LP L L E R+ G C V G Sbjct: 336 LAPLIAAILHLLVN--RNVSRKRSDPLFLLADEVPTLY-LPGLHHWLNENREDGLCTVLG 392 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 Q+ Q+E +YGE A ++ T+ F A+ + +G KE +Q S G Sbjct: 393 FQNLVQMEKMYGEDLARAIIGGCATKIIFNPQDQDSAKLFSDYLGLKE--VKFKQKSKGR 450 Query: 514 DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 + + + ++ + L SD LP C + P + R K A +I Sbjct: 451 SGGKASTNISEQIQTKPLFEASDFLQLPTGRCILLNP-----------HFKRGKSA--YI 497 Query: 574 PRDINPEMENRLSAVLAAREAE------GRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 P + ++ N +L E G Q S P ++GED+ Q Q + Sbjct: 498 PLLESIDLSNDYQTILKWSETRWDKVRGGLQGRSTQTP-----ITGEDLAARYQLAQNMF 552 Query: 628 PAINDKKSDS 637 P +K +S Sbjct: 553 PGGKNKGEES 562 >UniRef50_A8SY67 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SY67_9FIRM Length = 437 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 6/121 (4%) Query: 364 FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFF 423 F+IR+++R +D+K LFI+ + AS P+ +++ ++ +L+ N + + Sbjct: 257 FSIREFVRA--KDKK--ALFINYDMAYKASQVPIYGSLVNLMLKEVLSQNNNAGKTI-LI 311 Query: 424 CDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR 483 CDEL T+ K D+ + + R G + G+QS QL+ IYGE A ++ M + +FR Sbjct: 312 CDELVTMGK-TDIAQAVNLGRAKGLMVIVGLQSIEQLKSIYGEHDAIAMLAGMCNKLYFR 370 Query: 484 S 484 + Sbjct: 371 A 371 >UniRef50_C8WH79 TRAG family protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WH79_EGGLE Length = 610 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 7/203 (3%) Query: 386 SNADTHASLKPVISMWLSIAI---RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPE 442 S++D+ + MW + ++ L G + R V F DE + +PD ++ Sbjct: 396 SDSDSTFDFLFALLMWQATSVLYKTALARFGGSLKRPVHFLLDEFGNIGTVPDFERVIAT 455 Query: 443 ARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 AR + +QS +QLE Y ++ A ++ D +T F S + E + +G++ Sbjct: 456 ARSRNVSFSIILQSASQLERAYKKEGAKTILDCCDTVVFLGGKSTETNEMISKMVGKQTV 515 Query: 503 LKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 +E S GA+ R +ER L++ ++ LP V + G YP + Sbjct: 516 KVLTESDSRGAN--RSTTQNYNVIERD-LMTPDEVGRLPRDESIVLISGTYPLKGAKYRI 572 Query: 563 QTRPKVAPEFIPRDINPEMENRL 585 + P PE P E R Sbjct: 573 EEHPSY-PEVDPGHAGARHEERF 594 >UniRef50_B9JPS9 TRAG protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPS9_AGRRK Length = 787 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 73/338 (21%), Positives = 138/338 (40%), Gaps = 45/338 (13%) Query: 251 WKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEA-AYLM--------RN------ 295 W E T D N A TL+P+G KE+ +W+ + R + A A Y++ RN Sbjct: 222 WPERST--DLINLAATLLPIGEKEEAYWKQTARGLLAGALGYVLESASMEGRRNLRSVLR 279 Query: 296 --DPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 R +S ++ ++ + E L ++ S +L ++ ++ S +T + A Sbjct: 280 LLSTGRPFSAVLQEIIDNEPE-LDQFILGSFRQHLGRDEEQRP--SFEGHVTTALAAFNN 336 Query: 354 LQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLS----IAIRG 408 L E +G F IR R K LFI++ +++P+I + + + +R Sbjct: 337 LLIAEACSGSDFDIRSLRR------KPFSLFIAAPVSDFGTVEPIIRLLIQQIHDVMLRS 390 Query: 409 LLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 L G + ++ DE +LP++++ P +G Q+ QL++ YG++ Sbjct: 391 L--PGADEPHKILMMLDEFYQFERLPEIIKRAPLVAGYGLTIALVAQNIPQLDERYGQQT 448 Query: 469 AASLFDVMNTRAFFRSPSHKIAEFAAGEIG----EKEHLKASEQYSYGADPVRDGVSTGK 524 +L M+ + A+ + +G E+E +G S+G+ Sbjct: 449 RNALLGNMDVKLSIAVGDDATAKIVSDNLGRKYVEREGWGRQTGLLFGKQ-----ASSGR 503 Query: 525 DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 E L+ +Q L D + + G Y A+ L + Sbjct: 504 -FELVPLIDPGSVQRLDDSNTVLQVRGGYGAILNKLNF 540 >UniRef50_Q8YK80 All8037 protein n=3 Tax=Nostoc RepID=Q8YK80_ANASP Length = 590 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 2/140 (1%) Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 + + R + DELPTL+ LP LV+ L + R+ G + G Q+ +QLE Y E+ A + Sbjct: 372 VAKKRTEPLVLALDELPTLY-LPALVDWLNQNREDGLVSILGFQNISQLEKAYSEEVANA 430 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 +F T+AFF +P +A E +K E+ S + + L Sbjct: 431 IFGGCATKAFF-NPQDDVAGQRFSNFLGDEQIKHKERSRTSGGKGGASTSLSEQNSTRNL 489 Query: 532 VSYSDIQSLPDLTCYVTLPG 551 + SLP+ + PG Sbjct: 490 FEINQFNSLPEGRAIIVSPG 509 >UniRef50_C2ZYM5 TraG/TraD n=2 Tax=Bacillus cereus RepID=C2ZYM5_BACCE Length = 622 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 104/482 (21%), Positives = 186/482 (38%), Gaps = 76/482 (15%) Query: 111 AFVLAAVVALVICLITFFVVSWILGRQGK--------------QQSENEVTGGRQLTDNP 156 F++ AV+ +V L+ F + +Q K +Q E G + Sbjct: 37 TFIIVAVIHIV--LLVFLSIKLFRKKQRKLADGELLSWKDLKAEQDTQEAKGSFHTRNQ- 93 Query: 157 KDVARMLKKDGKDSDIRIG-DLPIIRDSEIQNFCLHGTVGAGKSE-----VIRRLANYAR 210 R KKD S I I +L + ++ L G G+GKS +R + N + Sbjct: 94 ----RSFKKDK--SGILISRNLKLSTKKSYEHVLLLGPTGSGKSAQFFKPSLRTIDNTS- 146 Query: 211 QRGDMVVIYDRSGEF---------VKSYYDPSIDKILNP-LDARCAAWDLWKECLTQPDF 260 +++ D GE K Y I+ +P + + L C Sbjct: 147 -----LIVTDPKGELHRDTKDFLEAKGYRVLHINFNTDPDEEVFSHNYSLLGNCTDDSSV 201 Query: 261 DNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSI--KIEKLRT 318 ++++ E W +T+ +L R+ +S + + + S +++L Sbjct: 202 RKIGDSILANTEGE---WGNLSKTLLLAFLFLERDMGEQSLNNVARNIGSFPDDLDELEA 258 Query: 319 YLRNSPAANLVEEKIEKTA------ISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRG 372 SP A L ++ KTA S+ A + + +K Y + + + + D+ G Sbjct: 259 IFSASPEALLQFKQFRKTARGDGYVSSVYATIQSVMKVFEYDKVKQVDSKS----DFSPG 314 Query: 373 VREDQKNGWLFISSNADTHASLKPVISMW---LSIAIRGLLAMGENRNRR----VWFFCD 425 QK LF+S +P +S + L I +M E++ + V F+ D Sbjct: 315 DLRTQKTA-LFLSYPTKDSKIYQPYLSSFYFQLISEIEAHPSMDESKPGKKGYGVVFYMD 373 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E + +P E L R ++ G+QS AQL+ Y + + L + TR Sbjct: 374 EFANIGIIPSFAEFLTTVRSKNMSFILGVQSIAQLKANYKDTFSI-LIENTKTRIALPGL 432 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD--L 543 H+ A+F + +GE+E+ S S +D VST + +++ ++S I+ LP L Sbjct: 433 IHETAKFFSDLVGEEEYNALSISSSAKSD-----VSTSESKQKKNVLSPDQIRRLPSNQL 487 Query: 544 TC 545 C Sbjct: 488 IC 489 >UniRef50_B9D155 VirD4 n=1 Tax=Campylobacter rectus RM3267 RepID=B9D155_WOLRE Length = 646 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 5/162 (3%) Query: 394 LKPVISMWLSIAIRGLLAMGE--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 L P+I +++ + L++ E + R ++FF DE K+P L+E R +G V Sbjct: 395 LAPLIRIFIETLFKKLMSGQECSDPERFIYFFGDEFVRFGKMPFLLEAPALCRSYGLLPV 454 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 F QSY Q++ YGE + + F S K AE + IG+ ++K S+ Sbjct: 455 FVTQSYEQIKKYYGEDDMNIVKNNSGYHVIFNMNSDKDAEDTSKLIGDYTNIKISKSQG- 513 Query: 512 GADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY 553 + + +S K E + LV+ D+++ + + G Y Sbjct: 514 NMELFKSNISKSK--EAKKLVTAQDLKNQDSSDILILVKGFY 553 >UniRef50_A8ZPT9 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPT9_ACAM1 Length = 591 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 16/194 (8%) Query: 394 LKPVISMWLSIAIRGLLAMGENRN----RR--VWFFCDELPTLHKLPDLVEILPEARKFG 447 L P I ++ + ++ + NRN R+ V FF DE+ TL K+P L ++L AR G Sbjct: 351 LNPQIEFAVAPLLASIIYLMINRNIYMARKDPVHFFLDEVQTL-KVPSLSKVLQVARSAG 409 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK-IAEFAAGEIGEKEHLKAS 506 GC+ G Q LE YG K ++ T F SH AE+ + G ++ + Sbjct: 410 GCFYLGTQGIDLLESTYGVKETENILTGCKT-VFVGQLSHNGTAEYYSKYFGMEDISYKN 468 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP--DLTCYVTLPGPYPAVKLSLKYQT 564 + S+G S G + LV + LP C G AV++ + +QT Sbjct: 469 KSRSHGKGGTNR--SEGDQQNTRPLVEIQQLLELPQGQFYCRNRGIGNKKAVRIPVHHQT 526 Query: 565 RPKVAPEFIPRDIN 578 V P + RD++ Sbjct: 527 ---VIPPWELRDMD 537 >UniRef50_B1X2K3 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X2K3_CYAA5 Length = 573 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 4/170 (2%) Query: 382 LFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILP 441 +F + + A+ P+++ + + I+ L R + DE ++ +LPD+ + Sbjct: 316 VFFQIDEQSEAATSPLVAAAIHMLIKRNLNAFVKRKNTFGLYLDEFTSI-RLPDIESWIN 374 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 ++G G QS +QL Y + A S+ T+A F + + AE + +G KE Sbjct: 375 RFAEYGFSAWLGYQSNSQLRLRYSREYAESILSSCGTKAVFNTGHPETAEKFSSALGTKE 434 Query: 502 HLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 +E SYG + R S M++ L+S I C + PG Sbjct: 435 VWYKNESRSYGKNGSR---SVTDHMQKIPLISGPAINRFEQGECVILNPG 481 >UniRef50_Q8ZSH1 Alr7539 protein n=6 Tax=Nostocaceae RepID=Q8ZSH1_ANASP Length = 608 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 3/158 (1%) Query: 393 SLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 ++ P+++ L + + +A + + DELP++ LPDL L E+R G C + Sbjct: 366 AVSPLMTSILHMVVSRSIAKKRKEDGPLVVCLDELPSIF-LPDLFRWLNESRSEGFCGIL 424 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 G Q+ QLE IYG++ + ++ T+ F + A + +GE+E + S G Sbjct: 425 GWQNMGQLEKIYGKEISKAILGACGTKFVFNPGEEESARLFSAYLGEEEIKYKQKSRSTG 484 Query: 513 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP 550 + S + + L + LP C P Sbjct: 485 GG--KSSTSISEQERTRKLFEPAQFLKLPPGKCLFINP 520 >UniRef50_Q5V7P5 TraD protein n=1 Tax=Haloarcula marismortui RepID=Q5V7P5_HALMA Length = 705 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 73/358 (20%), Positives = 139/358 (38%), Gaps = 51/358 (14%) Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP--- 232 ++P D ++ + G G+GK+ +++ LA + VI +GE +++Y+ Sbjct: 136 EMPFTLDQDVSTAVV-GETGSGKTSMMKLLAYQFPYYSNTAVIAHDTGEDFQAFYEELGF 194 Query: 233 SIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYL 292 + +I + + W+L+K+ ++ DF A + DPF + + +T FAE Sbjct: 195 DVQRIRH--EDSDVVWNLFKDADSESDFREVAGAIFGEADGHDPFHRPAKQT-FAEMLMY 251 Query: 293 MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVK--- 349 + LS + R L ++ +L+ E I+++ L + + Sbjct: 252 LH--------------LSAQKNNRRHALCHADIVSLLNEG----HIALKKALDEFDRLDS 293 Query: 350 ----------AIRYLQGIEHNGEPFTIRDW-------MRGVREDQKNGWLFISSNADTHA 392 A Q I+ N +P D+ ++ E+ + L I SN Sbjct: 294 GHIDPDKGKGAQNVYQTIKENVDPVFTGDFGDYGEFSLQEYIENPEGRVLIIDSNPTELE 353 Query: 393 SLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 +L P+ + + +IR AM N + DE+ L L + + RK + Sbjct: 354 TLGPMYQLLVDWSIR--YAM--NASNPTVHILDEIDALPALTQVTNLTARGRKHKARALV 409 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 G+Q+ QL+D Y + + +F + +F E+GE SE S Sbjct: 410 GVQTIGQLKDTY--STISGIVGNCPQGVYFGPGDTESTDFILDELGESRQYDRSEMVS 465 >UniRef50_A3IXB1 Transfer complex protein TrsK-like n=2 Tax=Cyanothece RepID=A3IXB1_9CHRO Length = 580 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%) Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 L P+ + +++ + +AM +R DE+PT++ +P L + E R G C + G Sbjct: 343 LAPLFAALINMIVDKNMAM--DRKDPFVLLADEVPTIY-IPMLKKWPNEHRSKGFCGILG 399 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 +Q+ QLE++YG+ A ++ TRA+ + AE+ A + EKE Sbjct: 400 VQNMTQLEEMYGKVGARNIIGACATRAYMNPQDIETAEWIAKALPEKE 447 >UniRef50_Q7M994 CONJUGAL TRANSFER PROTEIN (TRAG) n=1 Tax=Wolinella succinogenes RepID=Q7M994_WOLSU Length = 603 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 9/171 (5%) Query: 373 VREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM-GENRNRRVWFFCDELPTLH 431 +RED N L+I SL P+I + L ++ L++ + R++ DE+ Sbjct: 400 LRED--NITLYIKCLEKDIPSLSPIIRILLETIVKELMSRESTDPKERIYLELDEVMRFG 457 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 +L ++E+ +R + +F QSYAQ+ Y ++ + D + + FR+ + AE Sbjct: 458 ELDFMIELPSISRSYNLPNIFAAQSYAQIRKHYSQEDLEIMLDTVAYQVVFRANRQQAAE 517 Query: 492 FAAGEIGEKEHLKASEQYSYGAD-PVRDGVSTGKDMERQTLVSYSDIQSLP 541 + E+G+ A ++ + D + ST ++ +R LV+ DI ++P Sbjct: 518 DISKEVGD---FTAHKKTTSSQDIKILQSYSTSEEAKR--LVTAQDILNIP 563 >UniRef50_Q8R8F9 ATPase involved in conjugal plasmid transfer n=3 Tax=Clostridia RepID=Q8R8F9_THETN Length = 667 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 81/392 (20%), Positives = 153/392 (39%), Gaps = 28/392 (7%) Query: 198 KSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQ 257 K E+ R +A + + RG + +++ ++P I+ I + +DA+ L+ E + Sbjct: 179 KGEIFRDMAEFLKNRGYTIKVFNLVNMKHSDRWNP-IETIQDDIDAQ-----LFVEVII- 231 Query: 258 PDFDNTANTLIPMGTKEDPFWQGSGRTIF-AEAAYLMRNDPN--RSYSKLVDTLLSIKIE 314 +NT + DPFW + + + A A Y+ P R+ + + L S + Sbjct: 232 ------SNTKVATTKSGDPFWDRAEQNLLKALALYVAMEYPEHERNLASVYSLLASAEPR 285 Query: 315 KLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI---RDWMR 371 + + + P ++ + A + V T + + + N I D Sbjct: 286 AVDSVFKTLPNSHPAKMPYNIYAQANETVRTGIIIGLGTRLQVFQNKMVQKITETSDIDL 345 Query: 372 GVREDQKNGWLFISSNAD-THASLKPVISMWLSIAIRGLLAM-GENRNRRVWFFCDELPT 429 + +K + ISS+ D T L + +L I + M G N V+F DE P Sbjct: 346 ELPGREKCAYFCISSDTDSTFDFLAGLFFSFLFIKLTRYADMNGGTLNPNVYFLLDEFPN 405 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 + +PD + + R G Q+ +QL++ Y A + +TR F Sbjct: 406 IGAVPDFTKKISTMRSRGIHSSVVFQNISQLKNRYPNDAWQEIIGNCDTRLFLGCTDVAT 465 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTL 549 A+F + +G+ + + G + + D + +++ L++ +I L V L Sbjct: 466 AQFVSDLLGQATVEARTFRKHAGLEGLFDFGDISLNTQKRPLLTPDEILRLDHRNAIVIL 525 Query: 550 PGPYPA-------VKLSLKYQTRPKVAPEFIP 574 G P +K L + RP E+IP Sbjct: 526 RGQKPLMVEKMDYIKHPLSKEIRPVPITEYIP 557 >UniRef50_B1BR15 ATPase involved in conjugal plasmid transfer n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BR15_CLOPE Length = 702 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 17/183 (9%) Query: 389 DTHASLKPVISMWLSIAIRGLL----AMGENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 DTHA+ + ++ + A L+ +G+ V F DE P + K+PD + + R Sbjct: 93 DTHATFNFLAGLFFTFAFINLIDFADKLGDALPYHVNFLLDEFPNIAKIPDFEKKISTVR 152 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGE----- 499 G Q+ QLE Y ++ A+ + +++ F + A + + + + Sbjct: 153 SRGVSICVIFQTLLQLESRYSKEVASEILGNCDSKVFLGANEIDTATYISKMLDDTTIKV 212 Query: 500 KEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS 559 K +K + YS+ D V GV+ ++ L ++ P YV L G P L Sbjct: 213 KTTIKGA--YSFFDDKVSTGVA------KRELRKPGEVLKKPRTQSYVLLSGLDPIKALK 264 Query: 560 LKY 562 + Y Sbjct: 265 MDY 267 >UniRef50_A4IU07 TrsK n=4 Tax=Geobacillus RepID=A4IU07_GEOTN Length = 711 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%) Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI--YGEKAAASLFDVMNTR 479 F DE + + +L R G + IQ QLED YG + A S+ + +T+ Sbjct: 407 FLLDEFANIGTINKYPRVLATCRGLGMAMMTIIQDIGQLEDKKRYGPEMARSIINNHDTQ 466 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 F R+ K A++ + GE + SYG +S + +++L++ ++ + Sbjct: 467 LFLRTKDTKTAKYFSELAGETTVKHKQKSASYGRKEGSKSIS--EQYVKRSLITPGELMN 524 Query: 540 LPDLTCYVTLPGPYP 554 + TCY+ + G YP Sbjct: 525 MDKNTCYLFVSGAYP 539 >UniRef50_B7KLU0 Transfer complex protein TrsK-like protein n=3 Tax=Cyanobacteria RepID=B7KLU0_CYAP7 Length = 638 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 1/134 (0%) Query: 396 PVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 P+++ L + + ++ E R + F DELPT+ LP L EAR+ G C V Q Sbjct: 361 PLLAATLHMVVSRNVSRIEPRKDPLCVFLDELPTIF-LPQLQNWFNEAREDGFCGVIAAQ 419 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 + QLE IYG++ A +F + F + A++ + +G+ E S+ S Sbjct: 420 NLGQLERIYGKELARIIFGGTACKFLFNPQDPESAKYFSEFLGDVEVKYDSKSRSKNTGK 479 Query: 516 VRDGVSTGKDMERQ 529 DG S RQ Sbjct: 480 HGDGGSRSTSDNRQ 493 >UniRef50_B5Z5X5 TrsK protein n=3 Tax=Bacillus cereus group RepID=B5Z5X5_BACCE Length = 560 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 78/390 (20%), Positives = 156/390 (40%), Gaps = 41/390 (10%) Query: 273 KEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLR--------NSP 324 KED F+ + + Y +PN + K V ++ YLR + P Sbjct: 57 KEDYFFNTAKDLLAGLIIYCKSENPNANIPKDVKREF-YRVSDDENYLRELCDAIGEDHP 115 Query: 325 AANLVEEKIEKTAISIRAVLTNYVK--AIRYLQGIEH--NGEPFTIRDWMRGVREDQKNG 380 A NL+++ + ++L+++ + I LQ + F R++ + + Sbjct: 116 AYNLLKDASIAEGKTRTSILSSFAQQTGIFSLQKVARMTTHSDFNFREFQK------EKS 169 Query: 381 WLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV----WFFCDELPTLHKLPDL 436 L+I D + P+ + + I + + + ++ F DE + K+ Sbjct: 170 ILYIKIRMDENP-FTPLTATFFDQLITVFYDIADRNDSKLPIPSIFLLDEFANIGKIEKY 228 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 +L R G + IQ AQLE++YG++ A ++ + + F R+ + A++ + Sbjct: 229 GRVLSTCRGLGMSMITIIQDNAQLENLYGKEVARTIINNHDFTLFLRTKDPETAKYYSNL 288 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT----LVSYSDIQSLPDLTCYVTLPGP 552 GE SE S + S+ K ++ Q L++ ++ ++ CYV + G Sbjct: 289 AGETTVRMTSESLSSPSGMFSGKSSSSKSVQEQYVKRPLITEGELINIDKQDCYVFISGY 348 Query: 553 YPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA-SLFEPDVPEVV 611 YP L LK + + +F+ E R ++ + + ++ + E DV + Sbjct: 349 YP---LKLKKAWQFVIYKDFLKN--YDEYRERYRSLFNHNDKKVEELTDNELEKDVKVNL 403 Query: 612 SGEDVTQAEQPQQPVSPAINDKKSDSGVNV 641 E + Q +PQ DKK + +N+ Sbjct: 404 QKEKIVQEPEPQM-------DKKEEVELNI 426 >UniRef50_D1KAH2 TraG protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1KAH2_9BACE Length = 554 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 80/340 (23%), Positives = 134/340 (39%), Gaps = 39/340 (11%) Query: 192 GTVGAGKSEVIR--RLANYARQRGDMVVIYD---------------RSGEFVKSYY---- 230 G G+GKSE I L+ + R G V+YD G ++ +Y Sbjct: 105 GAAGSGKSESIAVPLLSEFVRM-GFAGVVYDFKFPTLAKDVQSFLNAKGSVLRHFYLDFN 163 Query: 231 DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAA 290 +P+ +NPL+ R + Q N L+ K+ FW S + Sbjct: 164 NPAASYRVNPLNPRYLPNTSYAREYAQAIISN----LMKESIKKPDFWTRSATDLLTACI 219 Query: 291 -YLMRNDPNRS-YSKLVDTLLSIKIEKLRTYLRNSPAANL---VEEKIEKTAIS-IRAVL 344 YL P+ ++ + S L+T +N A + + +E+ A S + V+ Sbjct: 220 WYLKEERPDICDLPHVLAMITSNDTALLKTLQKNVQTAQMTVSIYNAMERGADSQVSGVI 279 Query: 345 TNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 AI + E F+ D+ V + Q L + S + P+ S+ +++ Sbjct: 280 GTLQGAIAQINTPELMFL-FSGDDFSLDVNDPQNPIILTVGSYPTLTQTFAPLCSLVITV 338 Query: 405 AIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPE-ARKFGGCYVFGIQSYAQLEDI 463 A + M + + DE PT+ +P+ +E+LP R V Q AQLED Sbjct: 339 ATK---LMNQPDKHPSFVLLDEAPTVF-IPN-IEVLPNTGRSNKIATVIMCQDIAQLEDG 393 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 YG + A LF N+ + R S K AE + + G+ + + Sbjct: 394 YGREKADVLFASCNSHFYGRVASSKTAEILSKQFGKADKV 433 >UniRef50_Q4EJ40 Tn5252, Orf 21 protein, internal deletion, putative n=2 Tax=Listeria monocytogenes RepID=Q4EJ40_LISMO Length = 452 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 20/208 (9%) Query: 414 ENRNRR---VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 ENR + F DE P + K+ +L R G +Q Q+E +YG++ A Sbjct: 197 ENRGKLKIPTIFLLDEFPNIGKIDKYGRVLATCRGLGLSMNTIVQDNGQIESLYGKEMAR 256 Query: 471 SLFDVMNTRAFFRSPSHKIAEF---AAGEIGEKEHLKASEQY-SYGADPVRDGVSTGKDM 526 S+ +T F RS + ++ AGE K +S Q + + ST + Sbjct: 257 SILSNHDTLLFLRSKDMETIKYFSQLAGETTAKVQTGSSSQSGGFMSGKSSSSQSTSEQY 316 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLS 586 +++L+S D+ S+ CY+ + G YP L L+ + +V +++ R E Sbjct: 317 VKRSLISEGDLASIAKNDCYLFVSGLYP---LKLQKAWQAEVFGDYVERHTASE------ 367 Query: 587 AVLAAREAEGRQMASLFEPDVPEVVSGE 614 V A + E A+ +P VP+ E Sbjct: 368 PVTNAVKKE----AAFTQPPVPKATDTE 391 >UniRef50_A8ZPM8 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPM8_ACAM1 Length = 597 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 43/316 (13%) Query: 205 LANYARQRGDMVVI----YDRSGEF-----VKSYY--DPSIDKILNPLDARCAAWDLWKE 253 +A YAR G V I YD S F ++S + + DK D ++ E Sbjct: 167 IAGYARLHGYKVKIIAPGYDDSDVFNIYQMIRSRFGREAYEDK-----DGAGVVAEVLSE 221 Query: 254 CLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYS---KLVDTLLS 310 L + DN + P+ K+ +++F A YL DPN ++ L++ ++ Sbjct: 222 NLAKTAADN-GDEFFPLAAKQLL------QSVFLLALYL---DPNANFVLAFYLLERIVE 271 Query: 311 IKIEKLRT-----YLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFT 365 I +R+ YLR+S + L EK +T SI + + T Sbjct: 272 IGAAGIRSLDLPPYLRSSFSQYLASEKSAETGASIAGTTLLQFNRMFTPANVSTFCGDST 331 Query: 366 IRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCD 425 + ++G + N + AS+ P+I+ +I L R + + FF D Sbjct: 332 VDLEIKG------KTLVIFRLNPELKASVGPMIAT--TIQCFMLANAYRARTQPLGFFLD 383 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E + KL + E+ R G +VF Q ++ L+ YGEKAA L + T+ + Sbjct: 384 ECQMI-KLCGVQEMQTVTRSNGVFFVFASQGFSFLKGTYGEKAAMGLIEGCKTQVIGQLN 442 Query: 486 SHKIAEFAAGEIGEKE 501 +++ AE+ + + G+KE Sbjct: 443 ANEPAEYYSKQFGQKE 458 >UniRef50_B4WV81 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WV81_9SYNE Length = 616 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%) Query: 382 LFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILP 441 LF+ + +T ++ P+I+ + + I + E R + F DELP L+ LP + + + Sbjct: 317 LFLQVDEETQDAVLPLIAAMIELLIAHNFS--EPRKNILGLFLDELPLLY-LPKIAQYVN 373 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGE 499 R G G+QS +Q+ + YG+ A S+ FF + A+ + IGE Sbjct: 374 LLRSAGLVAFLGVQSLSQMRETYGKDMATSIMTGCRNTLFFNPNNVDTAKEVSARIGE 431 >UniRef50_Q30Q33 Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30Q33_SULDN Length = 502 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 23/219 (10%) Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 S +++F L + GK+ + + D +++ ++ G+ + +Y+ D ILNP D Sbjct: 105 SFVESFLLIAPMKGGKTTTLMNWID--NDFYDRMLVNEQKGDMLTKFYNKRKDFILNPFD 162 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN--DPNRS 300 R + WDL E + +F N L TK++ F+ S R +++ A L + DP Sbjct: 163 ERGSCWDLMSEPIPIIEF-YIVNAL-NEATKDESFFSSSARERYSQIAKLTIDIQDPKEK 220 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 + + + +L + N +K K S ++ ++ +L IE Sbjct: 221 W--------KVFLAELEYMFKEIETGN---QKSAKDVASTMKLILEPLQMTAFL--IEQG 267 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 + FTI DW R+ Q W+ + + SL P+ + Sbjct: 268 KKSFTISDWYE--RKHQSKIWMLMKNTY--RISLNPLFT 302 >UniRef50_B6JL32 VirD4 coupling protein n=6 Tax=Helicobacter pylori RepID=B6JL32_HELP2 Length = 575 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 4/170 (2%) Query: 393 SLKPVISMWL-SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 +L P+I + L SIA LL + RV+ F DE KLP L+E+ +R +G + Sbjct: 384 TLAPLIRILLESIAKNLLLKESKKFEERVYLFLDEFVRFGKLPFLLEMPALSRSYGVVLI 443 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 F Q A +E YG + A + + + F+ + A+ + E+G+ S Sbjct: 444 FITQPNALIEKYYGREDARIVNSTVAYKIIFKMDDLEYAKQVSEEVGKMTRKTRSHSTEK 503 Query: 512 GADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 G S GK E L+S DI ++ V + G + A L LK Sbjct: 504 GQLITGGTSSIGK--EAWDLLSAQDIMNIDKDEVIVLVSG-HKAKPLKLK 550 >UniRef50_C5EJN7 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJN7_9FIRM Length = 539 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 95/455 (20%), Positives = 175/455 (38%), Gaps = 65/455 (14%) Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGG-------------RQLTDNPKDVARML 163 ++ LV+ T F WI+ +GKQ E + G +++ PK ++L Sbjct: 41 IINLVLIAWTSFNNFWIVACEGKQLDEIHIGDGLVPETGLKKESPQKRIAMYPKVPPKLL 100 Query: 164 KKDG--------KDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVI---RRLANYAR-Q 211 K+ K+ +R+ P+ +I ++C+ G G GKS + LAN+A + Sbjct: 101 SKEPEGIILGKYKNQYVRV---PL---KDIYHYCILGGTGVGKSSGVLLNSLLANFAGGK 154 Query: 212 RGDMVVIYDRSGEF--VKS-YYDPSIDKILNPLDARCAAWDLWKECLTQPDFD------- 261 G D GE V S ++P + +++P + WD++ P D Sbjct: 155 NGFTSFSIDIKGELHEVSSPMFNPDV-IVVDPENRDSCGWDVYYRLHNHPSNDLILAAIE 213 Query: 262 NTANTLIPMGTKEDPFWQGSGRTIFAE--AAYLMRNDPNRSYSKLVDTLLSIKIEKLRT- 318 + LI +D F+ + +T Y MR + S+ V+ +L L T Sbjct: 214 EISEGLIVSTNSKDFFFVENAKTALTGLLVYYYMRGE---SFIDSVNRILESDTASLITE 270 Query: 319 YLRNSPAANLVEEKIEK----TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD-WMRGV 373 +++S ++L + + K TA S++ + T + L + F RD + + Sbjct: 271 IIKDSEPSDLWYKYLAKFNGKTAESVQDIFTEMCTS---LSVFSKDSVRFCFRDNYQKAS 327 Query: 374 REDQKNG-WLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHK 432 G +F+S D + K ++ + + L + + + + DE + + Sbjct: 328 PYSLLEGKSVFLSIKEDMLETYKAIMRLCTVQVFKELERRPKEQKKPILLIIDEFARIGE 387 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK---- 488 + + L R + QS AQ E IYG+ A L D + K Sbjct: 388 IKGVFNALYTLRSRNVMVLLAFQSLAQAEQIYGDDGARILMDNCRVKVILECNDPKTQKA 447 Query: 489 IAEFAAGEIGEKEHLKASEQ----YSYGADPVRDG 519 I+++ +KE L + Y+Y P+ D Sbjct: 448 ISDWCGTYRDKKETLNGGKNRHKSYTYEDKPIVDA 482 >UniRef50_A5KZI0 Type IV secretory pathway, VirD4 component n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZI0_9GAMM Length = 167 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%) Query: 9 TQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEG 68 T+GGQI IRM+ Q+ + L IF +L L + S TF Y Sbjct: 4 TRGGQITFHNIRMWWQVNVTTIKYLNIFAALLGLLTTYFITSTNTFTGAYYYTLFQLFNK 63 Query: 69 MRDLIKSQPV--YEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLIT 126 + ++ V +E Q Y T Q L + + C ++L A + +V + + Sbjct: 64 LGFSLERNVVLEWEEQRYSSTL----GQQLQNPILAQCYQELLQALFVGLLVYVAASTVL 119 Query: 127 FFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 F +++ R+G++QSE+ G QL + PK V Sbjct: 120 FVIINHWFKRKGQKQSEDNHIRGFQLAE-PKAV 151 >UniRef50_A6Q5N4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5N4_NITSB Length = 571 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 30/269 (11%) Query: 192 GTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLW 251 G++G GK+E + + +VI+D GEF YY D I+N LD R WD + Sbjct: 155 GSMGQGKTEFLNNIIVQWIDTNRKMVIHDTKGEFTSWYYRKGKDYIINHLDRRGVYWDFF 214 Query: 252 KE---CLTQPDFDNTANT--LIPMGTKEDPFWQGSGRTIFAEA--AYLMRNDPNRSYSKL 304 ++ L P + + G K D FWQ F E ++ND S+ K Sbjct: 215 EDNEKGLPYPLISEFFQSYFIAVAGDKGDKFWQEMAGKRFKEVFEELKLQNDV-PSHEK- 272 Query: 305 VDTLLSIKIEKLRTYLRNSPAA-NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP 363 + I ++L YL + A+ N E+ I A ++ A L ++K Y+ E Sbjct: 273 ----MEILAKELLAYLSYAKASGNKTEQSI---ASTLEASLDIFLK-FAYMAKNER--RK 322 Query: 364 FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW-- 421 + ++ + ED + +F+ + A P I+ +L++ +R L + + W Sbjct: 323 ILLTEFFKS--EDSR---IFLHTIAVGEKDNAPFITAFLTVMMRYQLTYFDKAPKEQWIL 377 Query: 422 FFCDE-LPTLHKLPDLV--EILPEARKFG 447 + DE L K+ + + + +AR +G Sbjct: 378 YVLDEYLTFFEKMSEDIRRSVHTKARSYG 406 >UniRef50_Q8GJE7 VirD4 n=1 Tax=Campylobacter jejuni subsp. jejuni 81-176 RepID=Q8GJE7_CAMJJ Length = 628 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 9/160 (5%) Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFC--DELPTLHKLPDLVEILPEARKFGGCYV 451 L P++ +++ + L++ EN N + +C DE K+P L+E R +G V Sbjct: 392 LAPLVRIFIESLFKKLMSGQENSNPDKFIYCLLDEFVRFGKMPFLLEAPALCRSYGLIPV 451 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 F QSY Q+ YGE + + FR + K A+ + IG+ K S S Sbjct: 452 FVTQSYEQIRKYYGEDDLGIIRANAGYQTIFRMNTEKDAKEISDLIGDFTREKTSS--SK 509 Query: 512 GA-DPVRDGVSTGKDMERQTLVSYSDI--QSLPDLTCYVT 548 G D + + K E L++ DI QS D+ VT Sbjct: 510 GTFDFFKSNNTVSK--EGYKLITSQDIKNQSSEDILILVT 547 >UniRef50_B6JNL0 VirD4 coupling protein n=10 Tax=Helicobacter RepID=B6JNL0_HELP2 Length = 747 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/320 (20%), Positives = 124/320 (38%), Gaps = 20/320 (6%) Query: 392 ASLKPVISMWL-SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 +L ++ +L SIA ++ R++ DE KLP L+E+ R + Sbjct: 430 GTLSSLVRAFLESIAKNLMVKESSKPEERIFIIADEFVRFGKLPFLLEMPALCRSYNVVP 489 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 +F Q YA + Y + L V++ F+ S + AE + E+G E + S+ YS Sbjct: 490 LFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVG--EFTRQSKNYS 547 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK----YQTRP 566 + G S+ E + L++ DI ++ V + G A L LK ++ + Sbjct: 548 TEKSQLVFGGSSSYSHEGRNLLTAQDIMNINSDEVIVIVTGA-KATPLKLKANYWFKDKE 606 Query: 567 KVAPEFIPRDINPEMENRLSAVLAAREAE---GRQMASLFEPDVPEVVSGEDVTQAEQPQ 623 + +P D+ E + + E E + A L + E V E + Sbjct: 607 LLKRANLPIDLEVERQRVEEPIQPTTEIETTPNQNKADLGPSNKGEKVENESNERNTNEN 666 Query: 624 QPVSPA------INDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAA 677 P +P + + + D + + ++ E+++ L +SE A Sbjct: 667 NPTTPQELENSNLKESEKDDESTITLENANENIEQGNHNEIDEILKKPLSEISMEEKRAL 726 Query: 678 YEAWQQ---ENHPDIQQQMQ 694 ++ QQ E+ ++ Q Q Sbjct: 727 FKKMQQGDEESEQEVTQSTQ 746 >UniRef50_B3ESQ2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESQ2_AMOA5 Length = 597 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 10/132 (7%) Query: 373 VREDQKNGWLFISSNADTHAS-LKPVISMWLSIAIRGLLAMGENRNRRVWFF--CDELPT 429 + D KN + N T S + PV+SM +++ + A + RV F DE+PT Sbjct: 376 IVNDPKNPLVVCLGNTPTEKSVISPVLSMCMAVLGTNMYA-----HDRVPSFNKADEIPT 430 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 L + PDL E RK+G V +Q+ AQLE Y A L D F S Sbjct: 431 LVR-PDLSEAPATGRKYGISTVIALQNMAQLEKAYTAIGAKELQDTFGNH-FIGRGSLSS 488 Query: 490 AEFAAGEIGEKE 501 A++ + +G++E Sbjct: 489 AQYISDLVGKQE 500 >UniRef50_B8I7H6 TRAG family protein n=23 Tax=Bacteria RepID=B8I7H6_CLOCE Length = 606 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 9/144 (6%) Query: 413 GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 G RV FF DE+ T+ K+ + +R V IQS+AQLE YG++ AA + Sbjct: 376 GGRLKNRVMFFLDEIGTIPKIDSAEMMFSASRSRRISIVAIIQSFAQLEKNYGKEGAAII 435 Query: 473 FDVMNTRAF--FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 D F F SH AE + +G K + S S G R+ S M ++ Sbjct: 436 IDNCQLVLFGGFAPNSHS-AEILSQALGNKTVMSGS--ISRG----RNDPSQSLQMIQRP 488 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYP 554 L++ ++++LP + G YP Sbjct: 489 LMTTDELKTLPKGNFILAKTGCYP 512 >UniRef50_C6X7V8 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7V8_METSD Length = 748 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 114/324 (35%), Gaps = 39/324 (12%) Query: 54 FVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFV 113 FV YW + + G+ + V + Y T + Q L L + Sbjct: 71 FVEHFTYWSKSIVNGVFPFLFKSSVEQYSLYMATIKHYGYQYL-----------LIPRIM 119 Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTG------GRQLTDNPKDVARMLKKDG 167 A + L + F K Q E + G G + + A + K G Sbjct: 120 FATFIGLFGATLGFMSKH---SNPVKAQVETHMRGMKLLEFGDAVEELVSKFASEILKHG 176 Query: 168 KDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK 227 K ++I +L + + + G G GKS+ + + +G +I D EF Sbjct: 177 KFTEIA-ENLSLSMKRVFAHHIIFGASGTGKSQYMGSAIFDSINKGLKTLILDPKYEFTS 235 Query: 228 SYYDPSID-KILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIF 286 ++Y + I++P DAR DL + A LIP DP W + R +F Sbjct: 236 AFYKNNGKMAIIDPTDARSHVVDLADLVASIGLIKKFAAALIP-AKGNDPMWSNAARAVF 294 Query: 287 AEAAYLMR-------NDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEK---- 335 ++ PN S+ L D ++S + + P A + +I K Sbjct: 295 TGLILYLKAMFKDDNGKPNFSWKDLADVMVSTPEQVIYIMQNYYPEALKLVGEINKETNQ 354 Query: 336 -----TAISIRAVLTNYVKAIRYL 354 TA SI L +++ IR L Sbjct: 355 LTENATATSIMINLLSFMGGIRDL 378 >UniRef50_D2LEB9 TRAG family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LEB9_RHOVA Length = 657 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 41/274 (14%) Query: 267 LIPMGTKEDPFWQGSGRT-IFAEAAYLMRNDP-NRSYSKLVDTLLSIKIE---------- 314 + P +DPFW GR +F A + ++P R V +L++ + Sbjct: 337 IAPDAGGKDPFWDNRGRDYLFTFALAVAFSEPAERRNLATVMEMLAVPVNFPDGVADAAY 396 Query: 315 ------KLRTYLR------NSPA----ANLVE----EKIEKTAISIRAVLTNYVKAIRYL 354 KL L+ N PA A VE ++I+ + R L+ + +++R Sbjct: 397 WASPTPKLMARLKALAQHYNIPALADNAVAVESSLNDRIDGVFDAARRYLSIFSRSVRLR 456 Query: 355 QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 + + DW +Q +++ + D + P++ + + LL Sbjct: 457 AAMARS-------DWTPLALREQPGTTVYLCLSGDDIDTYTPIVRLIIQQHANLLLRHTV 509 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + FF DE P L + ++ +L R Q QL D YG++A L + Sbjct: 510 GSRLPITFFLDEFPQLGNMASILRLLDVGRGAKLRLWLFAQYLGQLRDTYGKRADG-LIN 568 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 R+F + P ++ A F A ++G HL + E+ Sbjct: 569 ACRVRSFMQ-PDNQAASFLAPQLGTVVHLFSGEK 601 >UniRef50_C2BD69 TraG/TraD family protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD69_9FIRM Length = 679 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 13/197 (6%) Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR-----VWFFCDELPTL 430 ++K I +ADT + ++S+ S L E+R + V F DE + Sbjct: 419 ERKTALFAILPSADT--TFNWIVSLMYSQLFETLYYKAEHRASKSLAIPVRFILDEFANI 476 Query: 431 HKLPDLVEILPEARKFG-GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 K+PD L RK+ C V +Q+ QLE +Y EK SL +T F S Sbjct: 477 GKIPDFTNKLATMRKYDISCSVI-LQNLNQLEKMY-EKDHKSLVGNCDTTVFLGSGEKDT 534 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTL 549 E+ + +G K S S G + S +D+ ++ L++ +I + + +T+ Sbjct: 535 MEYFSKILGSTTIYKKSTGESLGRNK---SYSRNEDVIKRELMTPDEIGVMDNELSIITI 591 Query: 550 PGPYPAVKLSLKYQTRP 566 G P Y+ P Sbjct: 592 RGERPFKDEKFPYEKHP 608 >UniRef50_Q03BN9 Type IV secretory pathway, VirD4 component n=2 Tax=Lactobacillus casei RepID=Q03BN9_LACC3 Length = 819 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 82/369 (22%), Positives = 139/369 (37%), Gaps = 66/369 (17%) Query: 214 DMVVIYDRSGEFVKS----------------YYDPSIDKILNPLDARCAAWDLWKECLTQ 257 D V+I D GE ++S DP+ NPL+ L K+ Sbjct: 211 DSVIITDVKGEMLRSTKAEFEARGYRVAALNLVDPTYSIAYNPLE-------LVKQAYAA 263 Query: 258 PDFDNT-------ANTLIPMGTKEDPFWQGSGRTIFAEAAYLM------RNDPNRSYSKL 304 DFDN + ++ ++P W+ S ++ + ++ P + Sbjct: 264 GDFDNAQMLCNTFSYSIFHNPNAKEPMWEQSSISLLNALILAVCKVCFDQHTPEKITMYT 323 Query: 305 VDTLLS-----------IKIEKLRTYLRNSPAANLVEEKIE-KTAISIRAVLTNYVKAIR 352 V T+LS K++K + L + A L I+ I+ + T + I+ Sbjct: 324 VTTMLSELGANPDENGMTKLDKFFSKLPSGDPAKLQYGTIQFSQGITRSGIFTGTMAGIK 383 Query: 353 YLQ----GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLS----- 403 G F I D G D+ + I + D S +++ +LS Sbjct: 384 NYAFSNIGRLTATNDFNIADLATG---DKPVAFFIIYPDYDN--SNYSLVATFLSQVGYV 438 Query: 404 IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 +A LA RRV +EL L ++ L L R G Y +QS AQLE Sbjct: 439 LAKMATLAADSKLKRRVINLYEELGNLPRIEGLPHYLNVGRGRGLVYYLILQSIAQLEAN 498 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 YG++ AA + + + ++ AE+ + +IG+ + S +GA P+ S G Sbjct: 499 YGKEGAAEIMGACGNKYDILADNYDDAEYFSKQIGQTTVIAPSR---HGA-PMDTDKSFG 554 Query: 524 KDMERQTLV 532 + E + L+ Sbjct: 555 ESQETRRLM 563 >UniRef50_Q74H31 TraD protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74H31_GEOSL Length = 110 Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Query: 237 ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGT-KEDPFWQGSGRTIFAEAAYLMRN 295 + PLD RC W ++ + T D A +LIP DPFW G+ R +F + Sbjct: 7 VRQPLDKRCVGWTIFNDLETTIDIQALAASLIPAAAGNTDPFWNGAARDVFTGILSSLWR 66 Query: 296 DPNRSYSKLVDTL 308 D RS + ++L Sbjct: 67 DNYRSNRGIWNSL 79 >UniRef50_C8W0M1 TRAG family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0M1_DESAS Length = 511 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Query: 394 LKPVISMWLSIAIRGLLAMGENRNRR----VWFFCDELPTLHKLPDLVEILPEARKFGGC 449 LKP++S + + L + + NR+ V DE + ++P EI+ AR G Sbjct: 269 LKPILSTFYLFLFKRLYELADRNNRKLPVPVRMLLDEFANIGQVPGFSEIISTARSLGIH 328 Query: 450 YVFGIQSYAQLEDIYGEKAAASLF 473 F +Q +QL+D+YG A ++ Sbjct: 329 IQFILQGRSQLDDVYGRDEAKNIL 352 >UniRef50_Q03N56 Type IV secretory pathway, VirD4 component n=2 Tax=Lactobacillaceae RepID=Q03N56_LACBA Length = 543 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 54/286 (18%), Positives = 114/286 (39%), Gaps = 28/286 (9%) Query: 236 KILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYLMR 294 ++LN ++ + ++D T D + A TLIP+ + ++P+++ S + I A A + + Sbjct: 200 EVLNFINPK-QSYDPLATLQTYTDVTDLAKTLIPISSDIKEPYFRESAQNILASACWEFK 258 Query: 295 NDPNRSYSKLVDTLLSIKIE----------KLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 +S+S++ + L + + K T + + A + E++ +R L Sbjct: 259 GQ--KSFSEIAEFLTATPADAIIKQLSASSKSETRILINAVAGIKTEQLASVMNELRNTL 316 Query: 345 TNYVK--AIRYLQGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 + ++ L G N +P +D + W+++ +P +++ Sbjct: 317 VIFATDPVLKQLAGHSANSIQP-----------QDIETNWIYLVLPESKLKVYQPYLALI 365 Query: 402 LSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE 461 ++ R L E + DE P L LP + + R + +QS AQL+ Sbjct: 366 VAQFTRYLTQRPEKSQPNLLLALDEFPRLGYLPAFADAISTLRSRNVSVMILLQSLAQLD 425 Query: 462 DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 +Y E + D M+ + H ++ + G K + S Sbjct: 426 QLYQETGRKIIMDNMHYVVVHNALDHTSQQYFSDRAGTKTAVAKSH 471 >UniRef50_A3SLA3 TRAG protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SLA3_9RHOB Length = 647 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 31/292 (10%) Query: 269 PMGTKEDPFWQGSGR-----TIFAEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLR 321 P G DPFW R T+ A+ +D N R Y L D +L ++ L Sbjct: 220 PPGGDRDPFWPNGTRKKLVFTVVAQCVLRDAHDANIPRVYEVLSDDVLFGEL------LD 273 Query: 322 NSPAANLVEEKIEKTAISIRAVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVRE----- 375 ++ A++++ ++ A +I++V K + +G + PF + E Sbjct: 274 DAIASDVLGGELAAMARNIKSVWEENPKHFESFREGALQSLAPFGPSGRLAPSMETCDFR 333 Query: 376 ----DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLH 431 ++ L++ + P + + + A+R L+ EN + V+F DE T + Sbjct: 334 FSDLKKRKTTLYLICDYSRMDVFAPWLGLVIWAALRELVR--ENNDTPVYFLLDEF-TNY 390 Query: 432 KLPDLVEILPEARKFG-GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIA 490 +L L L +G C++ +Q ++ YG +A +++ + + FF S + A Sbjct: 391 RLSGLPNALTALGSYGIRCWML-VQELDEISRAYGREALSTILSQTDVKQFFGVASDQTA 449 Query: 491 EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD 542 + + +GE+E +SE + G D V S + L++ I+ LP+ Sbjct: 450 QLVSRMLGEEE--LSSESFGLGHD-VLGIPSLNLGRRSKPLLTADQIRRLPE 498 >UniRef50_C5D068 TRAG family protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D068_VARPS Length = 651 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 34/283 (12%) Query: 244 RCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIF-AEAAYLMRND- 296 R A W+ P D L P DPFW S R++F A YL Sbjct: 196 RSARWNPLGYVSETPYRCIDDLQRIGTMLFPDPQAGDPFWTSSARSLFLGIALYLFETKG 255 Query: 297 PNRSYSKLVDTLLSIKIEKLRTYLRNSPAA------NLVEEKIEK----------TAISI 340 R+ +++ ++ E + + + A L +E ++ TA SI Sbjct: 256 ATRTLGEILRQGMASDAEGFQKHWKRVIDACERAGYPLSQEAVQSLYDVIDLAPTTASSI 315 Query: 341 RAVLTNYVKA-IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 R T+ + + + + F +R +R+ + +++ N D A L+P+++ Sbjct: 316 RKTFTSRLDLWLNPMIDATTSANDFD----LRALRKHPIS--IYVQINPDNIARLQPLLN 369 Query: 400 MWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 ++ AI R L +V DE P L ++P + + + V +Q Sbjct: 370 LFFQQAIGLQTRELPENNPELRHQVLLMLDEFPALGRIPVIADSTAFLPGYNVRAVIIVQ 429 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 S +QL + YG + A S+ ++ R F ++ AE + E+G Sbjct: 430 SNSQLIEKYGIEGAKSIRKMLAARIVFPPKEYEDAEAISRELG 472 >UniRef50_UPI00016C445C hypothetical protein GobsU_08007 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C445C Length = 454 Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust. Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 27/295 (9%) Query: 259 DFDNTANTLIPMGTKED-PFWQGSGRTIFAEAAYLMRN---DPNRSYSKLVDTLLS-IKI 313 D A +I + K+ P++ + + +F A ++R+ P R+ ++ D LS + Sbjct: 103 DIAQMAANIIEVREKDSQPYFPQAAQHVFRAA--MLRHWLVTPGRATTR--DVFLSGMSA 158 Query: 314 EKLRTYLRNSPAANLVEEKIEKT--AISIRAVLTNYVKAIRYLQGI---EHNGEPFTIRD 368 +R + + P + + +T +S+ + L N V Y+ + G TIR Sbjct: 159 NNIRRVIGSHPQSRHALPLVNRTESGLSVISTLMNEVGKYEYVASLWDSNDRGRTVTIRS 218 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELP 428 +++ Q+ L + + + A+L V+ L + + L+ RNR + DEL Sbjct: 219 FLK-----QRFALLSLPYDDKSVATLAAVVRYLLVVLQQRALST-VVRNRYLLLLLDELA 272 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 L +L L + R+ G C +F QS++ ++G++ ++ +M T PS + Sbjct: 273 LLPGGINLDLTLVKGRETGICPLFAYQSHSHCRTVHGKEKFDAMTGLMKTTIVLNQPSRE 332 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL--VSYSDIQSLP 541 AE+ A +++ G +P STG + T+ V+ + IQSLP Sbjct: 333 DAEYCAKVFSDQQGFMKFNSAQGGKNP-----STGWSEQLTTVENVTAAMIQSLP 382 >UniRef50_C7CWB6 Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7CWB6_ENTFA Length = 753 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 10/151 (6%) Query: 397 VISMWLS-----IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 +IS +LS +A R L G+ RRV + +E + + L + Y Sbjct: 420 IISTFLSQVNEVLAERATLT-GKGVKRRVRYLLEEAANIPPIDGLSRSMNVGLGRNLIYH 478 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 IQSYAQL+D YG+K + ++ + + S + A++ A ++GEK + Sbjct: 479 LVIQSYAQLDDKYGDKMSKAITAACGNQIYIMSDEYDDADYFAKKLGEKTVIAPDRH--- 535 Query: 512 GADPVRDGVSTGKDMERQTLVSYSDIQSLPD 542 DP+ S G+ + + L++ ++++ L + Sbjct: 536 -GDPMSIDKSFGEREDGRQLLTANELRDLKE 565 >UniRef50_A3W6B6 Type IV secretion system coupling protein n=1 Tax=Roseovarius sp. 217 RepID=A3W6B6_9RHOB Length = 643 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 14/247 (5%) Query: 325 AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIR-------DWMRGVREDQ 377 A +V E A + +L +YV IR G+E +P R D+ RE Q Sbjct: 308 ANPVVAEIFLSMADEVDKILDSYVSVIRG-AGLELWLDPAVDRATQASDFDFGTFRREPQ 366 Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM--GENRNRRVWFFCDELPTLHKLPD 435 L+I + +L P+I + + AI L G + V F DE L K P Sbjct: 367 S---LYIVVQPEHLKTLAPLIRLLFADAIACLQRAHPGPDEPHPVMFLMDEFDQLGKQPL 423 Query: 436 LVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAG 495 +++ + R +GG QS LE IYGE +L + + + A+ + Sbjct: 424 VLQSIKTIRSYGGRLFIISQSIPGLEGIYGETDRRALQAGAGVQIYMTPQDDRTADVLSA 483 Query: 496 EIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPA 555 +G K + + + + + + E + LVS +++ P V G YP Sbjct: 484 ALG-KRTIVGKTRSQATVRKLSESANISRRSEERALVSPAELLRFPLDKVLVLPEGQYPI 542 Query: 556 VKLSLKY 562 ++Y Sbjct: 543 KADHIRY 549 >UniRef50_B8HZ08 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HZ08_CYAP4 Length = 562 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 13/197 (6%) Query: 328 LVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 L EK EKTA SI + +N K E + P + + D L + Sbjct: 264 LSTEKSEKTAASIAGIASNLFKRF-----TEQDIAPALVGQTSFPLFLDGAK-LLILGVR 317 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELP--TLHKLPDLVEILPEARK 445 +D + P+ LS+ + + R + + DEL T LP + E RK Sbjct: 318 SDLREVIMPIQMALLSLLVD--INSVPTRKKPLQICFDELAAATYRSLPSRIN---ENRK 372 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 +G + Q+ +QLE+ YG+ ++ T+ F + AE + +G +++ ++ Sbjct: 373 YGVYFNLAFQNLSQLEEKYGKNLTTAILGACGTQILFNPREQQTAELISKIVGTQKYRES 432 Query: 506 SEQYSYGADPVRDGVST 522 S V + S+ Sbjct: 433 QRSRSVSGGKVSNSTSS 449 >UniRef50_UPI00016C4AF4 Agrobacterium virulence virD4-like protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4AF4 Length = 595 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 87/418 (20%), Positives = 155/418 (37%), Gaps = 60/418 (14%) Query: 194 VGAGKSEVIRRLANYARQRGDMVVIYDRSGE----FVKSYYDPSIDKI-LNPLDARCAAW 248 VG G S ++ L R D VVIYD GE +S+ D + L+P Sbjct: 141 VGKGTSLILPFLLGLIR---DSVVIYDPKGEACNLTAQSFRDRGYQVVVLDPYQVATKTP 197 Query: 249 DLWKECLTQPDFDN----------TANTLIPMGTKEDPFWQGSGRTIFAEA---AYLMRN 295 D + L D D+ A ++ G + DP W S A L + Sbjct: 198 DGFNP-LAMIDKDSPLVIDHARAMAAEMVVRTGNEPDPHWNDSAEAFIAAMIALTCLYGD 256 Query: 296 DPNRSYSKLVDTLLSIKIEKLRTYLR----NSPAANLVEEKIEKTAI----SIRAVLTNY 347 NRS + V +LL+ E+++ ++ ++ + ++ + A + +VL+ Sbjct: 257 GANRSL-QAVRSLLT-DPERMQAAIKVMVGDTAMSGMIARMGHQLATLKDKELASVLSTT 314 Query: 348 VKAIRYL-------QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 + +R+L E +P + +K +F+ D + + + Sbjct: 315 NRHMRWLDTPAIANSTRESTFDPLDL---------TKKPLAVFVVLPVDQMKAQAGYLRL 365 Query: 401 WLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 + +R +A G +V F DE +L ++ L + L R +G QS QL Sbjct: 366 VMGSLLRACVAGGLQEQHKVHFVLDEAASLGEMDALEQALNIGRGYGIRIQLYYQSTGQL 425 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG-------A 513 + +G + T+ FF AE+ + +GE+ S + G Sbjct: 426 KKCWGVDGGDQVVLSNTTQIFFGVRDKDTAEYVSAMLGEETIWVESSGSNSGDSTSVNRN 485 Query: 514 DP-----VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 DP V G +TG + + L+ ++ +L + T PG P ++Y P Sbjct: 486 DPGGSFSVSRGRNTGLQQQARKLLKPEEVVALDERTAITLTPGVKPIATTLVRYYEEP 543 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P22708 Protein traD n=73 Tax=root RepID=TRAD2_ECOLX 972 0.0 UniRef50_B6ICH4 TraD protein n=1 Tax=Escherichia coli SE11 RepID... 673 0.0 UniRef50_C8QEC7 Type IV conjugative transfer system coupling pro... 668 0.0 UniRef50_D1S138 Conjugal transfer protein TraD n=1 Tax=Serratia ... 667 0.0 UniRef50_A4WGU5 Type IV secretory pathway VirD4 components-like ... 659 0.0 UniRef50_B2VB35 TraD protein n=1 Tax=Erwinia tasmaniensis RepID=... 616 e-174 UniRef50_B8EFQ3 Type IV conjugative transfer system coupling pro... 615 e-174 UniRef50_D2TZY7 Conjugal transfer protein TraD n=1 Tax=Arsenopho... 597 e-169 UniRef50_A8QYR8 TraD protein n=8 Tax=Gammaproteobacteria RepID=A... 592 e-167 UniRef50_Q5ZTT3 TraD n=1 Tax=Legionella pneumophila subsp. pneum... 581 e-164 UniRef50_B7JCL9 Conjugal transfer protein TraD n=11 Tax=root Rep... 580 e-164 UniRef50_D0Z587 IncF plasmid conjugative transfer protein TraD n... 571 e-161 UniRef50_B2I3X2 Type IV secretory pathway, VirD4 component n=1 T... 544 e-153 UniRef50_B0RKL6 TraD n=2 Tax=Yersinia RepID=B0RKL6_YEREN 544 e-153 UniRef50_Q0HXY0 Putative uncharacterized protein n=1 Tax=Shewane... 543 e-153 UniRef50_Q1NH25 TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25... 542 e-152 UniRef50_A1WDH0 TraD n=3 Tax=Burkholderiales RepID=A1WDH0_ACISJ 534 e-150 UniRef50_Q2G6A0 Type IV secretory pathway VirD4 components-like ... 513 e-143 UniRef50_D0SGZ6 Type IV secretory pathway protein n=1 Tax=Acinet... 512 e-143 UniRef50_Q6MB84 Putative conjugative transfer protein traD n=2 T... 507 e-142 UniRef50_A4XE63 Type IV secretory pathway VirD4 components-like ... 505 e-141 UniRef50_A0B526 Type IV secretory pathway VirD4 components-like ... 500 e-139 UniRef50_D1RMM8 Type IV conjugative transfer system coupling pro... 497 e-139 UniRef50_A3VMZ9 TraD n=1 Tax=Parvularcula bermudensis HTCC2503 R... 493 e-137 UniRef50_C4Z014 Putative conjugative transfer protein TraD n=1 T... 492 e-137 UniRef50_Q3HKI7 TraG n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 486 e-135 UniRef50_A5CC23 Conjugative transfer protein n=48 Tax=cellular o... 476 e-132 UniRef50_Q1N8W8 Type IV secretory pathway VirD4 components-like ... 474 e-132 UniRef50_C5SIG6 Type IV secretory pathway VirD4 protein-like pro... 467 e-130 UniRef50_C9NPT6 Type IV secretory pathway VirD4 component n=1 Ta... 467 e-130 UniRef50_C9CRW4 TraG n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9... 464 e-129 UniRef50_A5G187 Type IV secretory pathway VirD4 components-like ... 420 e-115 UniRef50_Q2QCR0 TraJ n=1 Tax=Pseudomonas sp. CT14 RepID=Q2QCR0_9... 410 e-112 UniRef50_Q32X91 Probable TrwB n=1 Tax=Xanthomonas axonopodis pv.... 402 e-110 UniRef50_B9MIL1 Putative type IV secretory pathway VirD4 compone... 401 e-110 UniRef50_B5YII5 Putative conjugative transfer protein TraD n=1 T... 400 e-109 UniRef50_B8GZQ6 Bacterial conjugation protein, ATP binding domai... 399 e-109 UniRef50_Q04230 TrwB n=5 Tax=Proteobacteria RepID=Q04230_ECOLX 391 e-107 UniRef50_C7HYW0 Putative type IV secretory pathway VirD4 compone... 391 e-107 UniRef50_B9BFK1 TrwB protein n=1 Tax=Burkholderia multivorans CG... 387 e-105 UniRef50_B2TH73 Type IV secretion system protein VirD4 n=1 Tax=B... 385 e-105 UniRef50_C6DZ92 Sigma 54 interacting domain protein n=1 Tax=Geob... 385 e-105 UniRef50_Q3SHV9 Putative type IV secretory pathway VirD4 compone... 385 e-105 UniRef50_Q7X127 TrwB n=8 Tax=Gammaproteobacteria RepID=Q7X127_XANCI 377 e-103 UniRef50_A9I2I0 Type IV secretion system protein VirD4 n=1 Tax=B... 367 1e-99 UniRef50_C1F5K1 Conserved domain protein n=2 Tax=Acidobacterium ... 363 1e-98 UniRef50_A5FU76 Type IV secretory pathway VirD4 components-like ... 361 5e-98 UniRef50_C1F4S3 Conserved domain protein n=1 Tax=Acidobacterium ... 357 7e-97 UniRef50_B6AM17 Plasmid coupling TrwB n=1 Tax=Leptospirillum sp.... 353 1e-95 UniRef50_B6AM16 Conjugation TrwB n=4 Tax=Leptospirillum sp. Grou... 350 1e-94 UniRef50_A9ATZ0 Type IV secretion system protein n=1 Tax=Burkhol... 348 5e-94 UniRef50_A5V2N2 Type IV secretory pathway VirD4 components-like ... 345 4e-93 UniRef50_Q17U09 TraJ n=11 Tax=root RepID=Q17U09_ECOLX 335 4e-90 UniRef50_D1BL71 Type IV secretory pathway VirD4 protein-like pro... 331 5e-89 UniRef50_B6ASB1 Conjugal transfer protein, TraB n=2 Tax=Leptospi... 328 5e-88 UniRef50_A3ETT1 Probable conjugal transfer protein (TraD) n=1 Ta... 326 2e-87 UniRef50_C6RJZ5 Putative uncharacterized protein n=1 Tax=Acineto... 326 2e-87 UniRef50_Q21BL2 Putative type IV secretory pathway VirD4 compone... 326 2e-87 UniRef50_Q3SI88 Putative type IV secretory pathway VirD4 compone... 318 6e-85 UniRef50_B8KYV9 Putative type IV secretory pathway VirD4 compone... 279 2e-73 UniRef50_B7Q9R6 Coupling protein TraD, putative (Fragment) n=1 T... 275 6e-72 UniRef50_B2FKA6 Putative type IV secretory protein conjugation p... 256 2e-66 UniRef50_A6BIV1 Putative uncharacterized protein n=2 Tax=Clostri... 252 4e-65 UniRef50_A4JFK6 Type IV secretory pathway VirD4 components-like ... 249 2e-64 UniRef50_A7BSA0 TraG/TraD family protein n=1 Tax=Beggiatoa sp. P... 246 2e-63 UniRef50_Q8R8F9 ATPase involved in conjugal plasmid transfer n=3... 241 6e-62 UniRef50_B7KK02 Transfer complex protein TrsK-like protein n=4 T... 238 4e-61 UniRef50_C2HF17 Putative uncharacterized protein n=1 Tax=Finegol... 237 1e-60 UniRef50_B4B5T3 Putative uncharacterized protein n=1 Tax=Cyanoth... 237 1e-60 UniRef50_A5ESM8 Putative uncharacterized protein n=1 Tax=Bradyrh... 236 2e-60 UniRef50_B0RB09 Putative conjugal trasnfer protein n=2 Tax=Clavi... 235 3e-60 UniRef50_C5EJN7 Predicted protein n=1 Tax=Clostridiales bacteriu... 234 1e-59 UniRef50_C2W8G4 Type IV secretory pathway VirD4 component n=2 Ta... 234 1e-59 UniRef50_C2ZYM5 TraG/TraD n=2 Tax=Bacillus cereus RepID=C2ZYM5_B... 232 4e-59 UniRef50_A4J2S8 TRAG family protein n=1 Tax=Desulfotomaculum red... 225 5e-57 UniRef50_Q8ZSH1 Alr7539 protein n=6 Tax=Nostocaceae RepID=Q8ZSH1... 222 4e-56 UniRef50_Q7NIZ2 Glr2040 protein n=1 Tax=Gloeobacter violaceus Re... 217 1e-54 UniRef50_D1KAH2 TraG protein n=1 Tax=Bacteroides sp. 3_1_33FAA R... 216 2e-54 UniRef50_D2LPL0 Type IV secretory pathway VirD4 protein-like pro... 216 2e-54 UniRef50_B4WW43 Putative uncharacterized protein n=1 Tax=Synecho... 213 2e-53 UniRef50_A6NS50 Putative uncharacterized protein n=1 Tax=Bactero... 212 4e-53 UniRef50_UPI00019793E0 cag island protein,DNA transfer protein (... 211 1e-52 UniRef50_A6UMU5 TRAG family protein n=5 Tax=Rhizobiales RepID=A6... 210 1e-52 UniRef50_B5Z5X5 TrsK protein n=3 Tax=Bacillus cereus group RepID... 208 9e-52 UniRef50_B7KLU0 Transfer complex protein TrsK-like protein n=3 T... 202 3e-50 UniRef50_B4WV81 Putative uncharacterized protein n=1 Tax=Synecho... 201 6e-50 UniRef50_A6GWX0 Putative mobilization protein, TraG family n=1 T... 201 7e-50 UniRef50_A4IU07 TrsK n=4 Tax=Geobacillus RepID=A4IU07_GEOTN 199 4e-49 UniRef50_A8SY67 Putative uncharacterized protein n=1 Tax=Coproco... 198 7e-49 UniRef50_Q31SG4 Membrane protein, n=6 Tax=Enterobacteriaceae Rep... 195 4e-48 UniRef50_Q5V7P5 TraD protein n=1 Tax=Haloarcula marismortui RepI... 195 5e-48 UniRef50_A6L5Y8 Mobilisation protein C n=20 Tax=Bacteroides RepI... 193 2e-47 UniRef50_A3IXB1 Transfer complex protein TrsK-like n=2 Tax=Cyano... 192 5e-47 UniRef50_B1X2K3 Putative uncharacterized protein n=1 Tax=Cyanoth... 190 1e-46 UniRef50_Q8YK80 All8037 protein n=3 Tax=Nostoc RepID=Q8YK80_ANASP 187 1e-45 UniRef50_A8ZL40 Putative uncharacterized protein n=2 Tax=Acaryoc... 185 4e-45 UniRef50_B9JPS9 TRAG protein n=1 Tax=Agrobacterium radiobacter K... 185 7e-45 UniRef50_A8ZPT9 Putative uncharacterized protein n=1 Tax=Acaryoc... 182 4e-44 UniRef50_B9D155 VirD4 n=1 Tax=Campylobacter rectus RM3267 RepID=... 174 1e-41 UniRef50_Q4EJ40 Tn5252, Orf 21 protein, internal deletion, putat... 174 1e-41 UniRef50_B4WVQ4 Putative uncharacterized protein n=1 Tax=Synecho... 173 2e-41 UniRef50_A8ZPM8 Putative uncharacterized protein n=2 Tax=Acaryoc... 172 4e-41 UniRef50_C8WH79 TRAG family protein n=1 Tax=Eggerthella lenta DS... 164 1e-38 UniRef50_A8ZPA8 Putative uncharacterized protein n=1 Tax=Acaryoc... 164 2e-38 UniRef50_Q7M994 CONJUGAL TRANSFER PROTEIN (TRAG) n=1 Tax=Wolinel... 159 4e-37 UniRef50_Q30Q33 Putative uncharacterized protein n=1 Tax=Sulfuri... 155 7e-36 UniRef50_B6JL32 VirD4 coupling protein n=6 Tax=Helicobacter pylo... 151 8e-35 UniRef50_B1BR15 ATPase involved in conjugal plasmid transfer n=1... 149 3e-34 UniRef50_B4WW44 Putative uncharacterized protein n=2 Tax=Synecho... 147 1e-33 Sequences not found previously or not previously below threshold: UniRef50_B1L333 ATPase involved in conjugal plasmid transfer n=3... 216 2e-54 UniRef50_Q2RLJ0 TRAG protein n=1 Tax=Moorella thermoacetica ATCC... 213 2e-53 UniRef50_B9MP28 TRAG family protein n=1 Tax=Anaerocellum thermop... 207 1e-51 UniRef50_A4XMT9 TRAG family protein n=2 Tax=Caldicellulosiruptor... 203 1e-50 UniRef50_B5UW87 Protein TrsK n=1 Tax=Bacillus cereus AH1134 RepI... 190 1e-46 UniRef50_C6X7V8 Type IV secretory pathway VirD4 protein-like pro... 190 2e-46 UniRef50_C9RCI6 TRAG family protein n=1 Tax=Ammonifex degensii K... 187 1e-45 UniRef50_UPI0001C35621 ATPase involved in conjugal plasmid trans... 185 4e-45 UniRef50_Q0KKK9 VirD4 type IV secration protein n=1 Tax=Plasmid ... 184 9e-45 UniRef50_B1I2W3 TRAG family protein n=1 Tax=Candidatus Desulforu... 184 1e-44 UniRef50_A4X0P9 TRAG family protein n=2 Tax=Rhodobacteraceae Rep... 183 3e-44 UniRef50_A7HU67 TRAG family protein n=108 Tax=Bacteria RepID=A7H... 182 4e-44 UniRef50_D2QVF5 Type IV secretory pathway VirD4 protein-like pro... 181 7e-44 UniRef50_C2BD69 TraG/TraD family protein n=1 Tax=Anaerococcus la... 178 8e-43 UniRef50_C5D068 TRAG family protein n=1 Tax=Variovorax paradoxus... 177 1e-42 UniRef50_A5ZXL8 Putative uncharacterized protein n=2 Tax=Ruminoc... 176 2e-42 UniRef50_Q07GJ0 VirD4 protein, putative n=1 Tax=Roseobacter deni... 176 3e-42 UniRef50_C6XEP7 TRAG family protein n=1 Tax=Methylovorus sp. SIP... 175 5e-42 UniRef50_D0L1A2 TRAG family protein n=4 Tax=Bacteria RepID=D0L1A... 175 5e-42 UniRef50_Q5I734 VirD4 n=1 Tax=Dichelobacter nodosus RepID=Q5I734... 175 6e-42 UniRef50_Q5ZW42 LvhD4 n=6 Tax=Legionella RepID=Q5ZW42_LEGPH 175 6e-42 UniRef50_Q981R7 Component of type IV secretion system n=1 Tax=Me... 175 6e-42 UniRef50_D1ATC0 Type IV secretion system protein VirD4 n=53 Tax=... 174 8e-42 UniRef50_A5N4W3 Plasmid transfer factor-related protein n=133 Ta... 173 2e-41 UniRef50_Q2ESM6 Hypothetical conjugation protein n=6 Tax=Bacillu... 173 2e-41 UniRef50_O87219 TrsK protein (TraK) n=9 Tax=Lactobacillales RepI... 173 2e-41 UniRef50_A5EUP0 Putative type IV secretory pathway protein VirD4... 172 3e-41 UniRef50_A5VH50 TRAG family protein n=2 Tax=Alphaproteobacteria ... 172 5e-41 UniRef50_C8W0M1 TRAG family protein n=1 Tax=Desulfotomaculum ace... 172 6e-41 UniRef50_Q1JB76 TraG/TraD family n=13 Tax=Bacteria RepID=Q1JB76_... 171 8e-41 UniRef50_C6BT46 TRAG family protein n=1 Tax=Desulfovibrio salexi... 171 1e-40 UniRef50_B8HZ08 Putative uncharacterized protein n=1 Tax=Cyanoth... 171 1e-40 UniRef50_Q07GD2 VirD4 protein, putative n=6 Tax=Bacteria RepID=Q... 171 1e-40 UniRef50_UPI00016C4AF4 Agrobacterium virulence virD4-like protei... 170 1e-40 UniRef50_C9LC04 ATPase n=12 Tax=Bacteria RepID=C9LC04_RUMHA 170 2e-40 UniRef50_A7GI48 TraG/TraD family protein n=4 Tax=Clostridium bot... 170 2e-40 UniRef50_A7VXU9 Putative uncharacterized protein n=1 Tax=Clostri... 170 2e-40 UniRef50_Q209N2 Conjugal transfer protein VirD4 n=2 Tax=Aeromona... 170 2e-40 UniRef50_A3EW05 Putative plasmid transfer factor (TraG) n=1 Tax=... 170 2e-40 UniRef50_C9R835 TRAG family protein n=1 Tax=Ammonifex degensii K... 169 3e-40 UniRef50_A5CZ99 Type IV secretory pathway, VirD4 components n=1 ... 169 3e-40 UniRef50_C2BRH0 TraG/TraD family protein n=1 Tax=Mobiluncus curt... 168 6e-40 UniRef50_B3ENB4 TRAG family protein n=1 Tax=Chlorobium phaeobact... 168 7e-40 UniRef50_D2UFC9 Putative type iv secretory pathway, conjugal tra... 168 1e-39 UniRef50_A4VV00 Type IV secretory pathway, VirD4 component n=20 ... 167 1e-39 UniRef50_A8S5W9 Putative uncharacterized protein n=4 Tax=Clostri... 165 4e-39 UniRef50_A1VQA5 TRAG family protein n=2 Tax=Burkholderiales RepI... 164 9e-39 UniRef50_D1AV80 TRAG family protein n=2 Tax=Streptobacillus moni... 164 9e-39 UniRef50_P18594 Protein virD4 n=16 Tax=Rhizobiales RepID=VIRD4_A... 164 1e-38 UniRef50_C5F2H7 Conjugal transfer protein TraG n=1 Tax=Helicobac... 164 1e-38 UniRef50_C5SH52 TRAG family protein n=1 Tax=Asticcacaulis excent... 162 5e-38 UniRef50_A6NYJ8 Putative uncharacterized protein n=1 Tax=Bactero... 161 1e-37 UniRef50_C6M7A4 Protein VirD4 n=1 Tax=Neisseria sicca ATCC 29256... 159 2e-37 UniRef50_B6JNL0 VirD4 coupling protein n=10 Tax=Helicobacter Rep... 159 3e-37 UniRef50_D0UIQ5 Conjugal transfer protein TraG/VirD4 n=1 Tax=Agg... 159 3e-37 UniRef50_B0KAV4 TRAG family protein n=6 Tax=Thermoanaerobacteral... 159 4e-37 UniRef50_B5E5D6 Tn5253 TraG protein n=7 Tax=Streptococcus pneumo... 159 4e-37 UniRef50_Q0ACU1 TRAG family protein n=1 Tax=Nitrosomonas eutroph... 158 5e-37 UniRef50_B7JB37 TraG/TraD family protein n=3 Tax=Acidithiobacill... 158 5e-37 UniRef50_UPI0001B44E8D hypothetical protein CdifQCD-6_07437 n=1 ... 158 7e-37 UniRef50_Q8GJE7 VirD4 n=1 Tax=Campylobacter jejuni subsp. jejuni... 158 9e-37 UniRef50_C6NY79 TraG n=1 Tax=Acidithiobacillus caldus ATCC 51756... 157 1e-36 UniRef50_UPI0001B497B1 TraG family mobilization protein n=1 Tax=... 157 2e-36 UniRef50_A3T2K0 Type IV secretion system coupling protein n=6 Ta... 157 2e-36 UniRef50_Q00184 Conjugal transfer protein traG n=32 Tax=root Rep... 157 2e-36 UniRef50_B4S9K8 TRAG family protein n=1 Tax=Prosthecochloris aes... 157 2e-36 UniRef50_C7N7M2 Type IV secretory pathway, VirD4 component n=2 T... 157 2e-36 UniRef50_A4J358 TRAG family protein n=2 Tax=Desulfotomaculum Rep... 156 3e-36 UniRef50_A4TUK6 Conjugal transfer protein n=2 Tax=Magnetospirill... 155 7e-36 UniRef50_A3IZA3 Putative uncharacterized protein n=1 Tax=Cyanoth... 154 9e-36 UniRef50_A3W6B6 Type IV secretion system coupling protein n=1 Ta... 154 1e-35 UniRef50_B4SNC9 TRAG family protein n=17 Tax=Proteobacteria RepI... 154 1e-35 UniRef50_D1PJ06 TraG family protein n=41 Tax=Bacteria RepID=D1PJ... 153 2e-35 UniRef50_C9M9B4 Conjugal transfer protein TraG n=1 Tax=Jonquetel... 153 2e-35 UniRef50_B4W828 TraG/TraD family n=1 Tax=Brevundimonas sp. BAL3 ... 153 2e-35 UniRef50_C4GHF7 Putative uncharacterized protein n=1 Tax=Kingell... 152 5e-35 UniRef50_D1PK86 TraG family protein n=8 Tax=Firmicutes RepID=D1P... 151 7e-35 UniRef50_B2T050 TRAG family protein n=12 Tax=Burkholderia RepID=... 151 1e-34 UniRef50_Q14QB8 Hypothetical trag transmembrane protein n=4 Tax=... 151 1e-34 UniRef50_Q6LGU8 Putative uncharacterized protein n=1 Tax=Photoba... 151 1e-34 UniRef50_Q2XV30 TraG/TraD family n=6 Tax=Staphylococcus aureus R... 151 1e-34 UniRef50_C8S1Z9 TRAG family protein n=1 Tax=Rhodobacter sp. SW2 ... 151 1e-34 UniRef50_A3SLA3 TRAG protein n=1 Tax=Roseovarius nubinhibens ISM... 151 1e-34 UniRef50_C3RFV3 TraG family mobilization protein n=11 Tax=Bacter... 150 2e-34 UniRef50_Q5DY60 Protein VirD4 n=1 Tax=Vibrio fischeri ES114 RepI... 150 2e-34 UniRef50_C6BB42 TRAG family protein n=15 Tax=Alphaproteobacteria... 150 2e-34 UniRef50_UPI0001C37912 TRAG family protein n=1 Tax=Ruminococcus ... 150 2e-34 UniRef50_C2HEY6 TraG/TraD family protein n=4 Tax=Enterococcus fa... 150 2e-34 UniRef50_Q0ACY8 TRAG family protein n=1 Tax=Nitrosomonas eutroph... 150 2e-34 UniRef50_Q8E5A4 Putative uncharacterized protein gbs1128 n=3 Tax... 149 4e-34 UniRef50_A7VQG5 Putative uncharacterized protein n=12 Tax=Bacter... 148 6e-34 UniRef50_Q9PHI9 Conjugal transfer protein n=1 Tax=Xylella fastid... 147 1e-33 UniRef50_A7FC77 Conjugal transfer protein TraG n=7 Tax=Gammaprot... 147 1e-33 UniRef50_Q6X3G3 TraG n=2 Tax=Gammaproteobacteria RepID=Q6X3G3_PSEAE 147 1e-33 UniRef50_C8WMY2 TRAG family protein n=2 Tax=Coriobacteriaceae Re... 147 1e-33 UniRef50_B0T9Q1 TRAG family protein n=2 Tax=Caulobacter sp. K31 ... 146 2e-33 UniRef50_A0P1U0 TRAG protein n=1 Tax=Labrenzia aggregata IAM 126... 146 3e-33 UniRef50_C7GFT5 TraG family protein n=15 Tax=Bacteria RepID=C7GF... 146 4e-33 UniRef50_D0ZHL9 Type IV secretory pathway component n=1 Tax=Edwa... 146 4e-33 UniRef50_B8I7H6 TRAG family protein n=23 Tax=Bacteria RepID=B8I7... 144 9e-33 UniRef50_C3RGR5 TraG family mobilization protein n=2 Tax=Bactero... 144 1e-32 UniRef50_Q2Y574 TRAG protein n=1 Tax=Nitrosospira multiformis AT... 144 1e-32 UniRef50_Q03BN9 Type IV secretory pathway, VirD4 component n=2 T... 144 1e-32 UniRef50_A2RL04 Conjugal transfer protein TraD n=14 Tax=Lactobac... 144 1e-32 UniRef50_A0M135 TraG/TraD family protein n=2 Tax=Flavobacteriace... 143 2e-32 UniRef50_B6A5A8 TRAG family protein n=1 Tax=Rhizobium leguminosa... 143 3e-32 UniRef50_D1LZH1 TraG n=1 Tax=Rhizobium leguminosarum bv. viciae ... 142 3e-32 UniRef50_Q03N56 Type IV secretory pathway, VirD4 component n=2 T... 142 4e-32 UniRef50_C1XZF6 Type IV secretory pathway, VirD4 component n=1 T... 142 4e-32 UniRef50_Q8VW38 Putative transposase n=1 Tax=Klebsiella pneumoni... 142 5e-32 UniRef50_C9D4W2 Trag family protein n=2 Tax=Silicibacter sp. Tri... 142 6e-32 UniRef50_C0BU69 Putative uncharacterized protein n=1 Tax=Bifidob... 142 6e-32 UniRef50_C3WQ29 Conjugal transfer protein traG n=7 Tax=Fusobacte... 141 7e-32 UniRef50_D1CWC3 Conjugal transfer protein traG n=1 Tax=Brucella ... 141 1e-31 UniRef50_Q91UW5 TraN protein n=1 Tax=Plasmid pIPO2T RepID=Q91UW5... 141 1e-31 UniRef50_UPI000196DA88 TRAG family protein n=1 Tax=Neisseria muc... 141 1e-31 UniRef50_B3PCB8 TraG/TraD family n=1 Tax=Cellvibrio japonicus Ue... 140 2e-31 UniRef50_A6GUT0 Conjugal transfer protein TraG n=1 Tax=Limnobact... 140 2e-31 UniRef50_D0T015 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 140 2e-31 UniRef50_B7RP33 TraG/TraD family protein n=2 Tax=Roseobacter sp.... 140 2e-31 UniRef50_Q0GU00 TraG n=1 Tax=Lactococcus lactis RepID=Q0GU00_9LACT 139 3e-31 UniRef50_A6ASA7 Conjugal transfer protein TraK n=2 Tax=Vibrio ha... 139 3e-31 UniRef50_C5A9B0 Type IV secretory pathway VirD4 components-like ... 139 4e-31 UniRef50_Q5CZF0 Putative plasmid transfer protein n=7 Tax=Bacter... 139 4e-31 UniRef50_C6LA24 TraG/TraD family protein n=1 Tax=Bryantella form... 139 5e-31 UniRef50_B1Y1V4 TRAG family protein n=1 Tax=Leptothrix cholodnii... 139 5e-31 UniRef50_Q5EK30 Putative uncharacterized protein n=1 Tax=Vibrio ... 138 6e-31 UniRef50_Q1IH60 CDS5 n=1 Tax=Mycoplasma agalactiae RepID=Q1IH60_... 137 1e-30 UniRef50_B6JK53 Trag protein n=2 Tax=Bradyrhizobiaceae RepID=B6J... 137 1e-30 UniRef50_A6Q5N4 Putative uncharacterized protein n=1 Tax=Nitrati... 137 1e-30 UniRef50_A8LU08 TraG family protein/type IV secretion system pro... 137 2e-30 UniRef50_A3VQZ2 Putative uncharacterized protein n=1 Tax=Parvula... 137 2e-30 UniRef50_A6NS31 Putative uncharacterized protein n=1 Tax=Bactero... 136 3e-30 UniRef50_C7WD59 TraG/TraD family protein n=1 Tax=Enterococcus fa... 135 8e-30 UniRef50_C5J6F0 Putative uncharacterized protein MCJ_003530 n=1 ... 134 1e-29 UniRef50_UPI00016C48A6 Agrobacterium virulence virD4-like protei... 134 1e-29 UniRef50_C7WLP9 TraG/TraD family protein n=7 Tax=Bacteria RepID=... 133 2e-29 UniRef50_B7ABM1 Type IV secretory pathway VirD4 protein-like pro... 133 2e-29 UniRef50_B3Q3U5 Conjugal transfer protein G n=5 Tax=Rhizobium et... 132 4e-29 UniRef50_Q48B00 Conjugal transfer protein n=11 Tax=Gammaproteoba... 132 4e-29 UniRef50_B3ESQ2 Putative uncharacterized protein n=1 Tax=Candida... 132 5e-29 >UniRef50_P22708 Protein traD n=73 Tax=root RepID=TRAD2_ECOLX Length = 738 Score = 972 bits (2512), Expect = 0.0, Method: Composition-based stats. Identities = 698/741 (94%), Positives = 708/741 (95%), Gaps = 27/741 (3%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWIL+GLVLW+KISWQTF+NGCIY Sbjct: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILIGLVLWVKISWQTFINGCIY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 WWCT+LEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWC EQLWSAFVLA+VVAL Sbjct: 61 WWCTSLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVAL 120 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII Sbjct: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP Sbjct: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS Sbjct: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 YSKLVDTLLSIKIEKLRT+LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN Sbjct: 301 YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 G+PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV Sbjct: 361 GDPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA+LFDVMNTRA Sbjct: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRA 480 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL Sbjct: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 PDLTCYVTLPGPYPAVKLSLKYQ RPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA Sbjct: 541 PDLTCYVTLPGPYPAVKLSLKYQARPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 Query: 601 SLFEPDVPEVVSGEDVTQAE------------------------QPQQPVSPAINDKKSD 636 SLFEP EV SGEDVTQAE QPQQPVS INDKKSD Sbjct: 601 SLFEP---EVASGEDVTQAEQPQQPQQPQQPQQPQQPQQPQQPQQPQQPVSSVINDKKSD 657 Query: 637 SGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRR 696 +GV+VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQ MQRR Sbjct: 658 AGVSVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQHMQRR 717 Query: 697 EEVNINVHRERGEDVEPGDDF 717 EEVNINVHRERGEDVEPGDDF Sbjct: 718 EEVNINVHRERGEDVEPGDDF 738 >UniRef50_B6ICH4 TraD protein n=1 Tax=Escherichia coli SE11 RepID=B6ICH4_ECOSE Length = 728 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 311/729 (42%), Positives = 446/729 (61%), Gaps = 21/729 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS + K +TQGGQ+ S + MF Q+ + + L FF I + L W+++ W+T NG +Y Sbjct: 1 MS-STKHITQGGQVFSYMLNMFMQVNKRVSFWLIWFFVIFLPLFFWLRLPWETIRNGGLY 59 Query: 61 WWCT-TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVA 119 WW + T G + L + PVY+I + G+ + Q+L D YM+W LA A Sbjct: 60 WWLSLTARGEKALYRVPPVYDIPWNGQVLHATSEQILKDDYMVWAGNMFLQELYLALFWA 119 Query: 120 LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI 179 V + F++ L R G++Q+++E GGR+LTD+ K VAR +++ G+ S I I LP+ Sbjct: 120 SVAVGVLAFLIFRFLRRLGEKQAQDERIGGRELTDDVKAVAREMRRRGEASSICIDKLPL 179 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILN 239 + +SE+Q ++GT GAGKS + +L R RGDM +IYD+ +K ++ D +LN Sbjct: 180 LLNSEVQYLMMYGTPGAGKSNTLNKLLKQIRARGDMAIIYDKGCSLIKKHFSEQDDVLLN 239 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR 299 LD RCA WD+++E + PDFD+ A+TLIPMGTKEDPFWQ S RTIF+ AY + + Sbjct: 240 ALDRRCAYWDMFREFESIPDFDSAASTLIPMGTKEDPFWQSSARTIFSAVAYRQKKNGIH 299 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 SY+ L+ TLL+I ++ LR YL + A+NLVEEK+EKTAISIR+VLTNYVKA+RYLQGIE Sbjct: 300 SYNALLRTLLAIDLKALRDYLTGTEASNLVEEKVEKTAISIRSVLTNYVKALRYLQGIER 359 Query: 360 NG-EPFTIRDWMRGVREDQ--KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 G PFTIR+WM V + Q ++GWL+++SNA H SLKP+ISMWL+ A LL MGEN+ Sbjct: 360 TGRRPFTIREWMSTVNDPQITRHGWLWVTSNARQHESLKPLISMWLAQAANCLLGMGENQ 419 Query: 417 NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 +RR+WF DELP+L+KLP+L +L EARKFGGC+V G Q+ AQ++ YG++ A ++ ++ Sbjct: 420 HRRIWFIYDELPSLNKLPELPGVLAEARKFGGCFVLGFQAKAQMDYTYGKEFADAMLGLV 479 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 NTR FFRSPS AE+ EIG++ SEQYSYGAD VRDGVS K E + LV+Y+D Sbjct: 480 NTRYFFRSPSSTEAEWVQREIGQRRDKVFSEQYSYGADTVRDGVSFSKVEEDRYLVNYTD 539 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 IQ LP+L CYVT PG YPAV++ + Y+ A E + RDIN ++ + + + RE E Sbjct: 540 IQKLPNLHCYVTFPGEYPAVRMRMSYEKIKDCAEELLLRDINDSLDPEIESEITRREDED 599 Query: 597 RQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEE 656 +A+L + V +D PQ + ++N+ + V A Sbjct: 600 GDIAALLDRIAQGNVRKDDEQNKTAPQPEQAESLNNPVLAAAVTQVAAAAVTG-GTGESN 658 Query: 657 EMEQQLPPGISESGEVVDMAAYEAWQQENH--------PDIQQQMQRREEVNINVH---- 704 +E++ P ++E E+VD E ++ Q+ R++E N+ H Sbjct: 659 PVEEKTP--VTELTEIVDKETGEILYPDDERYDELCRDTCHAQEAMRQDERNLVSHQTNE 716 Query: 705 -RERGEDVE 712 RE+ +D E Sbjct: 717 AREQDDDRE 725 >UniRef50_C8QEC7 Type IV conjugative transfer system coupling protein TraD n=2 Tax=Pantoea sp. At-9b RepID=C8QEC7_9ENTR Length = 880 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 274/658 (41%), Positives = 402/658 (61%), Gaps = 19/658 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSF K++TQGGQ+ + R+RMF Q++N + + + + F V ++ W+ NG Y Sbjct: 1 MSFTPKNLTQGGQMTAYRLRMFGQVSNWIFHWILLLFIAAVAVLFWLTTPDDVLRNGFWY 60 Query: 61 WWCTTLEGMRDLIKSQPV--YEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAF 112 W + L ++I ++ T +M Q+L D +M + ++ Sbjct: 61 WAAWPSHSLLGLAPGTTTATWDILWHCGDGTSLCTTKMTPVQLLADPWMQAMGDAFVASL 120 Query: 113 VLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDI 172 A V + + +++W +GR GK++SE+E G LTD PK+V R+LKK G+ SD+ Sbjct: 121 KFLATVCGITAFALWCLIAWFVGRIGKKESEDEFISGMTLTDQPKEVNRLLKKAGEKSDL 180 Query: 173 RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP 232 +IG L +++++E+ NF +HGT+G GKS +IR L +Y R+RGD +IYD G F++++Y+P Sbjct: 181 QIGGLHMVKNAEVMNFLIHGTIGVGKSTLIRWLLDYIRRRGDRAIIYDSGGTFIETHYNP 240 Query: 233 SIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYL 292 DKILNP D+RC W LW+EC D++N L+P+ DPFW S RTIF++ A Sbjct: 241 RRDKILNPHDSRCENWVLWRECREVVDYENLTAALMPVEGDSDPFWVSSSRTIFSDGAMQ 300 Query: 293 MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 DP RS + TLLSI ++ LR +L+N+P+ANLVEEKIEKTAISIR+VLTNY K++R Sbjct: 301 FAADPARSIETFLKTLLSIDLKSLREFLKNTPSANLVEEKIEKTAISIRSVLTNYAKSLR 360 Query: 353 YLQGIEHNGEP-FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 YLQG++ G+P F+IR+WM G + D + WLFIS+ A +++P+ISMWLS+A L + Sbjct: 361 YLQGLDKEGKPEFSIREWMTGAQYD--SSWLFISTTARHRRAVRPLISMWLSLATLLLQS 418 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 MGEN RRVWF DE+ +L K+P+L E L EARKFGGC+V G+Q+ QL IYG + A + Sbjct: 419 MGENSGRRVWFIGDEIASLQKIPELNETLAEARKFGGCFVLGVQNIPQLVHIYGREMAKA 478 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 +FD++NTRA+ RSPS ++A+ E+G + +A EQ SYG D VRDG+S KD + + Sbjct: 479 IFDLLNTRAYGRSPSAEVAKMVEEELGHQRRREAREQNSYGLDQVRDGISISKDKVNEPV 538 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 V Y I +P+L Y+ LPG YP VKLSLKY+ + K I RD + L ++ + Sbjct: 539 VDYDLIMKMPNLRFYMRLPGEYPVVKLSLKYRKQRKSHRALIERDFRDRLSPELERIIES 598 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPV----SPAINDKKSDSGVNVPAGG 645 E R A + P E++ +V ++ +PV SP K +D+ PA G Sbjct: 599 NERSAR-AADISFPTGEEILEAGNVQSVQKVPEPVAVPASPVTVRKVTDT---TPAPG 652 >UniRef50_D1S138 Conjugal transfer protein TraD n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S138_SEROD Length = 786 Score = 667 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 290/696 (41%), Positives = 411/696 (59%), Gaps = 19/696 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS + K++TQGGQI + + RMF QI N + + +F+ F I+ GL +++ +T NG Y Sbjct: 1 MSMSTKNITQGGQILAYQYRMFLQINNKIGFWIFMMFLIITGLGVFLVTPLETIQNGSWY 60 Query: 61 WWCTTLEGMRDLIKSQPV-YEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAFV 113 W+ + L ++ Y+I+Y+ T +M Q+L D YMI E+LW+ Sbjct: 61 WFANINKSFLFLSENDTTTYDIKYFYAPTKVMYTLKMTMTQMLGDPYMIAMGEKLWNRIT 120 Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 ++ + + F +++W +G+ GK+QS +E+ G +LTD+PK V ++LK++G+ SD+ Sbjct: 121 YTSMFSGGFSISVFCLITWYIGKIGKEQSSDEILSGMELTDDPKVVNKLLKENGECSDLS 180 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 + L +++ SEI N +HGT+ GKS +IR L R+RGD +I+D FV+S Y P Sbjct: 181 VYHLHLVKQSEILNLLMHGTISVGKSTIIRYLLKQIRERGDRAIIWDSGCTFVESNYRPD 240 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAAYL 292 D ++NP D RCA W LW EC PD+DN AN+LIP G DPFW S RTIF+ AA Sbjct: 241 KDFLMNPYDERCANWHLWGECSNMPDYDNMANSLIPVEGESTDPFWVSSARTIFSSAASQ 300 Query: 293 MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 M DP +S K + LLS+ I+ LR+YL ++ AA+LV+EKIEKTAISIR+V+TNY K++R Sbjct: 301 MDTDPEQSIEKFLRVLLSLSIKNLRSYLEHTEAASLVDEKIEKTAISIRSVITNYAKSLR 360 Query: 353 YLQGIEHNGEP-FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 YLQG++ +G+P FTIRDWM + WLFIS+NA +SL+P+ISMWLS+A L++ Sbjct: 361 YLQGLDRSGKPRFTIRDWMTNPA--MSDSWLFISANAQQKSSLRPLISMWLSLATINLMS 418 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 MG++ RRVWF DELP L KLP+L ++ EARKFGGC+V GIQ+ QL IYG S Sbjct: 419 MGQDAKRRVWFILDELPGLQKLPELPGVMAEARKFGGCFVIGIQNMPQLIQIYGRNMGES 478 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 LFD++NTR + RSPS +A+ E+G + +A EQYSYG D +RDGVS KD R+ + Sbjct: 479 LFDLLNTRFYGRSPSATVAKLVEAELGMQRRKEAKEQYSYGPDQIRDGVSLAKDKVREPI 538 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 V Y I LP+L YV LPG YP KL LKY P I R+ N + + ++ Sbjct: 539 VDYDQIMRLPNLNFYVRLPGEYPVTKLKLKYLDSKNTQPALILRNFNESLNPEIEKLVQH 598 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELK 651 E A+L P P G+ VT P +P+ PA+N P + + Sbjct: 599 NE-RAASAANLIFPINPYEEGGDTVTAKPIP-EPM-PAVN-----VEQQQPDPSLAPISE 650 Query: 652 MKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHP 687 P + + I S EV+D Q + P Sbjct: 651 APPLQSISPVRSDVIQPSAEVLDKVMSTPVSQASVP 686 >UniRef50_A4WGU5 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGU5_ENT38 Length = 840 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 278/675 (41%), Positives = 404/675 (59%), Gaps = 15/675 (2%) Query: 14 IASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLI 73 + + R RMF Q+ N + + +FI F +L + + +I +T NG ++W+ DL+ Sbjct: 1 MTAYRWRMFLQVNNWIGFWIFILFAVLASAIFFWRIPQETLDNGSLWWFAWMNSSFIDLM 60 Query: 74 KSQ--PVYEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLI 125 + +Y+I Y+ +M AQ+ D YM +Q+ S A + + V + Sbjct: 61 PASAPKLYDIHYWYAPTQTPMVLKMTLAQIFTDPYMTAMGDQVLSELQWAGLASGVFSMA 120 Query: 126 TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEI 185 F V+W + G+++SE+E G LTD DV ++L+++G+ SD+R+GDL ++R +E+ Sbjct: 121 VFLAVTWYIVGIGRRESEDEYLSGMTLTDKAADVNQLLRRNGELSDLRVGDLHMVRMAEV 180 Query: 186 QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARC 245 NF +HGT+G GKS +IR L +Y R+RGD +IYD F +++Y+P D ILN D RC Sbjct: 181 MNFLMHGTIGVGKSTLIRWLLDYIRKRGDRAIIYDSGCTFTETHYNPDTDFILNAHDDRC 240 Query: 246 AAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLV 305 A W LW EC+ D+DN A++LIP+ + DPFW S RTIFA+ A M DP+RS K + Sbjct: 241 ANWQLWGECVDAVDYDNMASSLIPVEGESDPFWVSSSRTIFADLAIRMSVDPDRSIEKFL 300 Query: 306 DTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE-PF 364 TLLS+ ++ LR YL N+P+ANLVEEKIEKTAISIR+V+TNY K++RYLQG++ + PF Sbjct: 301 KTLLSLSMKSLREYLANTPSANLVEEKIEKTAISIRSVVTNYAKSLRYLQGLDDGVKPPF 360 Query: 365 TIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFC 424 TIR+WM +E+ + WLFIS+ A S++P+IS+W+S+A L +MGEN +RRVWF Sbjct: 361 TIREWM--TKEEHDSSWLFISTQARHRKSVRPLISLWVSLATMMLQSMGENSDRRVWFIY 418 Query: 425 DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS 484 DE+P+L ++P+L E L EARKFGGC+V G+Q+ AQL +YG + A S+FD+MNTR + RS Sbjct: 419 DEIPSLQRIPELAETLAEARKFGGCFVLGMQNMAQLVHVYGRELAKSIFDLMNTRMYGRS 478 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 PS ++A+ E+G + K EQ SYG D VRDGVS GKD +V Y + LP+L Sbjct: 479 PSAEMAKVVEEELGNQRKRKIREQNSYGLDQVRDGVSLGKDEVNNPIVDYEQVMRLPNLN 538 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE 604 YV LPG YP V+L LKY+ + K P I R+I+ + L V+ A E +A L Sbjct: 539 FYVRLPGEYPVVRLKLKYREQKKHHPGLIERNIHDALSPELEKVIQANE-RAASVAGLAF 597 Query: 605 PDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPP 664 P EV+ E + +E +PA + V A I Q+ + + P Sbjct: 598 PTGDEVL--EKGSNSETATTINTPATVRQTPVVAKPVTASAISQK-PAPAVTAVNKPDEP 654 Query: 665 GISESGEVVDMAAYE 679 + V A E Sbjct: 655 VLPVKHSPVTPPATE 669 >UniRef50_B2VB35 TraD protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB35_ERWT9 Length = 788 Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 254/722 (35%), Positives = 385/722 (53%), Gaps = 44/722 (6%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSF D+T+GGQI + R++MF+Q+ N + + L ++ + NG Y Sbjct: 1 MSFRPSDITKGGQITAYRVKMFNQVNNWFSFWIVTVLMGASLLAFFLVTPPEIISNGLTY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEIQY--YGKTFRM-----NAAQVLHDKYMIWCSEQLWSAFV 113 W + E L+ + Y Y ++ VL + M + Sbjct: 61 WIARSSESFLGLVVNDTAKAFSYAIYRGDLKLSEVPLTLGDVLRSQIMRDVGDVFLIRLE 120 Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 + A V + LI +F++ + + R GK+++ +E G TD+PK V +ML ++ S I+ Sbjct: 121 MYAGVGATLSLIIYFILMFGVARIGKKETADEYISGMTRTDSPKVVNKMLAQNRALSPIK 180 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 IG L +++++EIQNF +HGT+G GKS +IR L +Y R+RGD +++D G F+K++++ Sbjct: 181 IGPLHMVKNAEIQNFLIHGTIGTGKSTIIRYLLDYIRKRGDRFIVFDPGGTFIKTHFNAR 240 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 D IL+P DARCA WDLW EC T D++N A++LIP+ DPFW S RTI A+ A M Sbjct: 241 RDFILDPHDARCANWDLWHECQTVVDYENFASSLIPIEGNSDPFWVSSSRTICADTAMRM 300 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 N + + T+LS+ ++ LR +L+N+P+ANLVEEKIEKTAISIR+V TNY KA+R+ Sbjct: 301 SRKENPTIEDFLHTILSLSLKSLREFLKNTPSANLVEEKIEKTAISIRSVTTNYAKALRF 360 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 +QG+ + F+IR+W++ R Q + LFIS+N S + +ISMWLS+A L +MG Sbjct: 361 MQGVNQGQDKFSIREWIQDNR--QSHSGLFISTN--FLRSTRSLISMWLSMATTLLQSMG 416 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 E+RNRRVWF DE+ +L K+P E L +ARK+GGC+V GIQ+ AQ+ D YG A ++ Sbjct: 417 EDRNRRVWFIYDEVASLQKIPGFRETLADARKYGGCFVLGIQNMAQMSDTYGRDNAKAVL 476 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 D++NTR + RSPS +A E+G + ++ EQ S+G D VRDG+S G+D + +V Sbjct: 477 DLVNTRIYGRSPSSDMATDVQNELGYQRRWESKEQNSFGLDQVRDGISIGRDKVHEPVVD 536 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAARE 593 +I SLPDL + LPG YP +KL++ Y+ PK A +I R + + + ++ E Sbjct: 537 KEEIMSLPDLRFFFRLPGEYPVIKLAVPYRDLPKKAESYIERSFHDSLSPLIEKIIEHNE 596 Query: 594 AEGRQMASLFEPDVPEVVSGEDVTQAEQPQQ----------------------------P 625 +E + + F P G+ EQP Sbjct: 597 SE---IPADFTEATPAQAVGQSKAAQEQPATADELPDMPVPAPSVPAPGAAKADTAAPDN 653 Query: 626 VSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQEN 685 V+ K P E+ P E + P S + AA + Sbjct: 654 VTDIFARVKDKVPQTQPGQSAAAEITPPPVREA--EPGPAARVSEPAQNPAASAEPAPVS 711 Query: 686 HP 687 P Sbjct: 712 KP 713 >UniRef50_B8EFQ3 Type IV conjugative transfer system coupling protein TraD n=14 Tax=Gammaproteobacteria RepID=B8EFQ3_SHEB2 Length = 708 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 240/672 (35%), Positives = 378/672 (56%), Gaps = 23/672 (3%) Query: 1 MSFNAK-----DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFV 55 M+ N K + T+GGQI +RMF QI +++ IL L+ ++ I T Sbjct: 1 MTLNPKRTKGSNYTRGGQILFHNLRMFLQINAVLIRWTCYGVLILTALLCFLFIDKDTLT 60 Query: 56 NGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLA 115 YW T+ R V + ++ G + L + +I + + W + Sbjct: 61 GAYYYWINQTVSMFR---PESHVMQTEWQGTVYTSTLGSQLQNPILIAANSRFWLWSQIY 117 Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 +++ VI + V W ++G +Q+E G Q PK++A+ LKKD + SD ++ Sbjct: 118 FLISCVIGFVFLSVAMWFFKKKGDEQTEEHFIRGMQ-KATPKELAKQLKKDKRQSDFKLD 176 Query: 176 DLPIIRDS-EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 + I ++ E+Q+ L GT GAGKS +R+ + R+RGD +IYD+ FV +Y+P+ Sbjct: 177 GIGIFKERFEVQHLLLDGTTGAGKSVALRKFLTWIRERGDKAIIYDKGCTFVSKFYNPAT 236 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR 294 D +LNP D RCA WD+W + DF+N A+ LIP + DPFW S RTIF+ A+ M+ Sbjct: 237 DVLLNPFDERCAYWDVWCDAHEPSDFENMASALIPQHGEGDPFWVQSARTIFSSTAFKMQ 296 Query: 295 NDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 ++P N++ +L++ +L+ ++E L YL+ + +A+LV +KI+KTAISI++VL Y+K++R Sbjct: 297 DEPKMNQTTERLLELMLTSELESLSEYLKGTESASLVSDKIQKTAISIKSVLAAYIKSLR 356 Query: 353 YLQGIEHNGEP-------FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 +L G++ F+IR+W++ D +NG+LF+SSNA HASL+P+ISMWLSIA Sbjct: 357 FLAGLDEKDGQGKLLRRKFSIREWVKN---DAENGFLFLSSNAQQHASLRPLISMWLSIA 413 Query: 406 IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 +L E+ +RR+W DE P+LHKLP+L E + E RKFGGCYV GIQS+AQL+ +YG Sbjct: 414 STAILEQDEDPDRRIWVLMDEAPSLHKLPELAETIAEVRKFGGCYVIGIQSFAQLKKVYG 473 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 E AA +FD++NTR FFRSPS+++A+ ++ ++GE+E + EQYSYGA+ +RDGVS G Sbjct: 474 ENAALEMFDLLNTRLFFRSPSNEMAKISSHDLGEQEVDVSKEQYSYGANEIRDGVSLGHQ 533 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINP-EMENR 584 + +V+ S+I L DL ++ PG YP V++ L++ + FI R+ P E + Sbjct: 534 TITRPVVTPSEIMQLEDLQFWLRTPGNYPVVRVDLEFNQMRSLCAPFIKRNYTPSENIKQ 593 Query: 585 LSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAG 644 + L + Q + + + E + + A K + A Sbjct: 594 IEWSLNYHQFSAVQHVDKADKTKLQSIHDTMYEGDENNDERSAEAQRMTKLAEKTDAVAQ 653 Query: 645 GIEQELKMKPEE 656 + K KP E Sbjct: 654 SLIDAKKAKPTE 665 >UniRef50_D2TZY7 Conjugal transfer protein TraD n=1 Tax=Arsenophonus nasoniae RepID=D2TZY7_9ENTR Length = 687 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 245/607 (40%), Positives = 367/607 (60%), Gaps = 13/607 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS +A++MTQGGQ+ + MF QIANI+ + + I ++ + ++I + ++G Y Sbjct: 3 MSLDARNMTQGGQVIKYMVAMFMQIANIVAFWVIIATVMVFFATIAVQIPLEKMIHGLAY 62 Query: 61 WWCTTLEG-MRDLIKSQPVYEIQYY------GKT--FRMNAAQVLHDKYMIWCSEQLWSA 111 W L +++ I + ++ G+ F A +V D+Y I+C L A Sbjct: 63 WAIDKLVIPLQEAIGTSEGGTFTFHWLNPRTGQVIEFEKTAREVRLDRYFIYCYVLLKEA 122 Query: 112 FVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD 171 A VA + V W LG++G QQ +NE+ GGR L ++ K++ + LK GK S Sbjct: 123 AFWAWGVASFTFVGLIVAVFWWLGKKGAQQRKNEIIGGRYLANSVKEINQFLKAKGKLSS 182 Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 ++IGDL ++ +SE QN LHGTVG GKS VI L R++ ++YD+ F+ +Y Sbjct: 183 LKIGDLHLVENSEQQNIGLHGTVGTGKSTVINDLLTQVRKQRKRAIVYDKGNNFIPLFYR 242 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 D ILNP+DARC WDLW+EC + DF+ A L P DPFW S R +F A Sbjct: 243 EGKDIILNPMDARCPNWDLWRECQDRADFETFALPLFPDAKSGDPFWLMSARLLFVATAE 302 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 MR+ P+RS KL+ LLSI + +L +++ + AANLV+ IEKTA++IR VL+ YVKA+ Sbjct: 303 HMRSHPDRSIKKLLQRLLSISLAELHDFVQGTDAANLVDGSIEKTAMTIRTVLSAYVKAL 362 Query: 352 RYLQGIEHNGE-PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 RY QG+E + PF+IR+W++ ED W+FISS+ H +LKP+IS WL++ ++ +L Sbjct: 363 RYCQGLEKESKPPFSIREWVQNANED---AWIFISSDGRLHTALKPLISTWLNLTMQSVL 419 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 A+ +R R+W DELP+LHKLP + + L EARKFGG + GIQ+++QLE YG A Sbjct: 420 ALTPSRESRIWTVLDELPSLHKLPVISDYLSEARKFGGATLIGIQNFSQLEANYGAHDAR 479 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 +++D+ NT +FR+PS +AE+ E+GE LK +QYSYG D +RDGV+ K+ R+ Sbjct: 480 NIWDLANTSLYFRAPSGSVAEWVQKELGETRLLKFRDQYSYGVDTIRDGVNFSKEDTREK 539 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLA 590 +VS+SDIQ+L DL C+V+L G P VKL+L+++ +A I RD++ +N++ L Sbjct: 540 IVSFSDIQNLDDLECFVSLRGNVPIVKLTLEHKPYETIAAGKIERDVSAVFDNQIEQELN 599 Query: 591 AREAEGR 597 E + Sbjct: 600 KSGIENK 606 >UniRef50_A8QYR8 TraD protein n=8 Tax=Gammaproteobacteria RepID=A8QYR8_9GAMM Length = 621 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 231/575 (40%), Positives = 349/575 (60%), Gaps = 9/575 (1%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWC 63 N K T+GGQI+ +RM+ QI + IF+ + + +W IS + + I+++ Sbjct: 6 NFKHYTRGGQISFHNLRMWDQITKTLSMICLIFWIVFTLVFVWFFISLEKITHAVIFYYA 65 Query: 64 TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC 123 LE + + +E+ ++GKT++ +L+ Y + + + +A+ A + Sbjct: 66 QFLEI----VGQKHTFELSFHGKTYKQTVDSILNYAYYQDNANHVIHSLGKSALWAFCLS 121 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDS 183 I +++ ++GK QS+++ G Q + V + + +D SDI I P+I++S Sbjct: 122 FILGLCLAYYFIKRGKAQSDSQFVRGSQF-KHSNVVKKKILRDKAHSDITIDTFPLIKNS 180 Query: 184 EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDA 243 E+Q+ +HGTVG GKS++I ++ + R+RGD V++YD+ F+ YY D ILNP D Sbjct: 181 EVQHVLVHGTVGTGKSQLIMKIMDCLRKRGDRVIVYDKGCSFIAHYYQDESDVILNPFDK 240 Query: 244 RCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSK 303 RCA WD+W E DF+N A + IPM + DPFW + RT+F+ +MR+ +RS K Sbjct: 241 RCANWDMWLEAPRDSDFENMAESSIPMHGESDPFWVNASRTVFSCLGSVMRHHSDRSVEK 300 Query: 304 LVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP 363 L+ +L+ + L YL+ +PAA LV KIEKTAISIRA LT Y+K+ L + G+P Sbjct: 301 LLKLILTDEFSDLEEYLQGTPAATLVSSKIEKTAISIRATLTTYLKSFSALAELNQEGKP 360 Query: 364 -FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWF 422 F+IRD++ ++Q+ GWLFISSN +TH SLKP+ISMWL+ A LL++ +RNRR+WF Sbjct: 361 PFSIRDYIL---DEQQKGWLFISSNGETHKSLKPLISMWLAQASLALLSLTPDRNRRIWF 417 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF 482 CDELP+LHKLP L E + E RKFGGC++ G+QS++QL +YG+ +FD++NTR FF Sbjct: 418 ICDELPSLHKLPLLGETIAEVRKFGGCFLLGMQSFSQLTKVYGQAGGREIFDLLNTRFFF 477 Query: 483 RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD 542 RSPS +A A E+GE+E ++ E YSYGA+ +RDG+S G + +VSY I L D Sbjct: 478 RSPSSDMARLVASELGEEEIEESRENYSYGANSIRDGISLGAQRVTRPIVSYPQIMELKD 537 Query: 543 LTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDI 577 L C+V LPG YP +L+L R FI R++ Sbjct: 538 LHCFVRLPGHYPITQLTLDLGFRTIKTNGFIERNM 572 >UniRef50_Q5ZTT3 TraD n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTT3_LEGPH Length = 630 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 204/624 (32%), Positives = 340/624 (54%), Gaps = 24/624 (3%) Query: 1 MSFNA-KDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCI 59 M+ N K +GGQI +RMF+Q+ + + I F+I + + S G Sbjct: 2 MAVNPTKLFIRGGQIFLHNVRMFTQVGKKVSLAMLIVFFIFSVIAFYFNTSAYQRYIGQQ 61 Query: 60 YWWCTTLEGMRDLIKSQPVYEI-QYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVV 118 + LI+S+ + G+++ + +AQ++ +I QL A + + + Sbjct: 62 WVKAQA----MTLIQSKAKQVVRMPTGESYPVYSAQIVKAPMVIGIVNQLKQALLKSMIE 117 Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLP 178 AL ++ V+ L ++G+ QS+ ++ G +L D + + +KK + S RIG + Sbjct: 118 ALFASVMMLIVMVKWLQKRGENQSKAKIIRGSELVD-ENTLQKCIKKTSRISPYRIGGVS 176 Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKIL 238 + SE Q+ + GT G+GK+ IR L + RG+ +IYD+ G ++ +Y D IL Sbjct: 177 LPFGSETQHIQIVGTTGSGKTVAIRDLLTTIQARGERAIIYDKGGTYLSRFYREHQDVIL 236 Query: 239 NPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKE--DPFWQGSGRTIFAEAAYLMRND 296 NPLD R +W++W EC + D + A ++PM DPFW + R IF A ++ND Sbjct: 237 NPLDTRGHSWNVWAECEDKADLEALAEAIMPMPINNTMDPFWIKAARMIFVSTANELKND 296 Query: 297 PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQG 356 P RS L+ LL+ + ++ LR++ + +LV +K++KTA++++ V+ Y+K++ YL+ Sbjct: 297 PKRSNLMLLQYLLTADLGRIHHLLRHTESESLVSDKVQKTALNVKTVMATYLKSLLYLKD 356 Query: 357 IEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 +G+ F+IRDW+ +Q N LF+SS+ H +++P+IS W++ A + LL++ + Sbjct: 357 ---DGDIFSIRDWILN---EQNNSCLFVSSDGRKHPTIRPLISAWINTATKELLSLAPDD 410 Query: 417 NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 NRRVWF DEL TLH LP L + E+RKFGGC++ G +QL IYG AASL ++ Sbjct: 411 NRRVWFILDELATLHALPFLAAVKSESRKFGGCFLLGHHGASQLRTIYGNDGAASLSNLC 470 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 +TR F R P H AE A+ IG E + +E SYGA+ +RDG+S + + + LV + Sbjct: 471 STRLFLRLPEHTDAEHASRNIGTYEIEEVNESISYGANTMRDGISVSRQTKEKQLVLPTQ 530 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPE---------MENRLSA 587 IQ + DL Y+ + G +PA K+ L Y P + EFI RDI+P+ ++ Sbjct: 531 IQVINDLQGYLRVKGEFPAAKIKLNYVDYPLIHEEFIARDIDPDPLRQKVEQLVDTYSDP 590 Query: 588 VLAAREAEGRQMASLFEPDVPEVV 611 +LAA + + A+ + D+ + + Sbjct: 591 ILAASHDDALEAATSTKKDITKPI 614 >UniRef50_B7JCL9 Conjugal transfer protein TraD n=11 Tax=root RepID=B7JCL9_ECOLX Length = 432 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 408/416 (98%), Positives = 415/416 (99%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSFNAKDMTQGGQIASMRIRMFSQIANI+LYCLFIFFWILVGLVLW+KISWQTFVNGCIY Sbjct: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIILYCLFIFFWILVGLVLWVKISWQTFVNGCIY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 WWCTTLEGMRDLI+SQPVYEIQYYGKTFRMNAAQVLHDKYMIWC EQLWSAFVLA+VVAL Sbjct: 61 WWCTTLEGMRDLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVAL 120 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 VICLITFFVVSWILGRQGKQQSENE+TGGRQLTDNPK+VARMLKKDGKDSDIRIGDLPII Sbjct: 121 VICLITFFVVSWILGRQGKQQSENEITGGRQLTDNPKEVARMLKKDGKDSDIRIGDLPII 180 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP Sbjct: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS Sbjct: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 YSKLVDTLLSIKIEKLRT+LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN Sbjct: 301 YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR Sbjct: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 >UniRef50_D0Z587 IncF plasmid conjugative transfer protein TraD n=3 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z587_LISDA Length = 711 Score = 571 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 216/708 (30%), Positives = 353/708 (49%), Gaps = 24/708 (3%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWC 63 N K T+GGQI +RM+ QI ++ + +I L + I + Y++ Sbjct: 12 NTKAFTRGGQITFHNLRMYFQILAVIGSWSMVIAFIFTALFAYFLIDIDQLL-ALKYYFH 70 Query: 64 TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC 123 + D + Y G+ + A ++L + + ++ LA + + Sbjct: 71 AKYLALPD-----TKIMVMYQGQEYPYTAEKLLSSERFNASVDDVFLDIQLAFIFSFFAV 125 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI-IRD 182 +I F V+ ++G++Q+++ + G ++ P+++ R LKKD S ++ L + + Sbjct: 126 MIAFMKVTKYFEKKGEEQTQDYLIRGTEIA-TPQELERRLKKDKNTSPFKLDGLSLLPNN 184 Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 EI++ G+ G GKS IR+L R RGD +IYD+ FV +YD D ILNP D Sbjct: 185 FEIRHLSFSGSTGTGKSVAIRKLLREIRARGDKAIIYDKGCTFVSRFYDEHKDYILNPFD 244 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR-SY 301 R W +W + DF++ + LI DPFW S RT+F AY M D + Sbjct: 245 ERSVDWKIWYDAQEFSDFESLSTALIADSGHGDPFWIESARTLFTNTAYQMTQDGKPLTN 304 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 +L+D +L LR +L+ + A+ + +EK +K AIS++++L Y+K++RYL+G++ Sbjct: 305 ERLLDYILKTPTSVLREFLKGTMASAITDEKADKIAISVKSILAAYIKSLRYLEGLDQQD 364 Query: 362 E------PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN 415 + F++RDW+ +D + G+LF++SNA H SL+P+ISMWLS A +L + E+ Sbjct: 365 KNGKRRKAFSVRDWVL---DDNEKGFLFLTSNAQQHVSLRPLISMWLSTASTAILGLDES 421 Query: 416 RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 RR+W DELP+LH+LPDL L E RK GGCY+ G QS+AQ IYG AA ++D+ Sbjct: 422 TTRRIWVITDELPSLHRLPDLASTLAEVRKHGGCYLVGFQSFAQFVKIYGRDAAEEMYDL 481 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 +NTR +FR+PS AE ++ ++GE+E + EQYSYGA+ VRDG+S G + V S Sbjct: 482 LNTRFYFRNPSAPQAEKSSKDLGEQEIEISKEQYSYGANSVRDGISLGHQTITRPAVMTS 541 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN-PEMENRLSAVLAAREA 594 +I +L DL C+ G YP +++ K+ VA FI R + + R+ LA + Sbjct: 542 EIMALDDLQCWYRTFGGYPITRINFKFDDMASVAVPFIKRVYDSSDTMKRIDGELAHYQM 601 Query: 595 EGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKP 654 + V + + Q + D + + E+ K +P Sbjct: 602 GALLALPDEDKQVLLNIHK---ARHNNEQGDCDQSSYDNECEQMKETVKENNERIEKEQP 658 Query: 655 EEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNIN 702 E+E + I + + ++ +Q + EE IN Sbjct: 659 EKEKSRNDDQDIEKQKMKEEQELKRQMSADDQT--EQAFRETEETMIN 704 >UniRef50_B2I3X2 Type IV secretory pathway, VirD4 component n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X2_ACIBC Length = 719 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 196/712 (27%), Positives = 336/712 (47%), Gaps = 51/712 (7%) Query: 5 AKDMTQGGQIASMRIRMF-SQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYW-- 61 A + T+G +I + RMF S + N++++ L I I+ L+IK+ F+ + + Sbjct: 9 AIEFTRGSEIWIHQFRMFISSMMNVIVFGLMITIGIVCA-FLYIKLKDVHFLALSVQYDI 67 Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 W ++ D ++ ++ + + ++ AQ + + Y ++ AF+L +++ Sbjct: 68 WLKSVFNNPD---ARVALKLNGVVRDYTLDQAQHIINPYFNQLKFYVFRAFILGILLSSF 124 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 L+ + W GK+ +E G +L N + ++ G S +I ++P+++ Sbjct: 125 --LVGGLIYYWFTY--GKEVMSDEQIRGSELVSNDALIYKIQSTKGF-SPYKISNIPMVK 179 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPL 241 ++E N + G G+GKS++ R + R ++YD SGEF +Y P ID ILNP Sbjct: 180 NTEGTNVGIFGAPGSGKSQIFRDHLSQVRNNKRKAIVYDPSGEFTSEFYRPGIDIILNPF 239 Query: 242 DARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY 301 D R W + E FD+ AN +P+ K DP++ +GRT+ AE + + S Sbjct: 240 DERMPYWSPFFEIRHDEHFDSIANAFVPVEGK-DPYFGEAGRTVLAEVMRELHANGIHSN 298 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 L DT+ IE++ + L + A+ V++K EKTA+++ + N ++A RYL +G Sbjct: 299 KTLHDTIAHFTIEEISSVLEGTAASKHVDKKAEKTALAVLTTVQNKLRAFRYLPD---SG 355 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 F+IRDW+ ED W+F+S + +++P+I++W SI I+ ++ + +W Sbjct: 356 TQFSIRDWVSRPEED---SWIFLSLREEQKTTIEPLITLWFSIFIKAVMNLEPIHRELLW 412 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 +CDE PTL K+ DL L RKFG C+ G+Q QLE+ YGEK A S+ + T+ F Sbjct: 413 MYCDEFPTLPKMDDLPLSLTNTRKFGLCHFLGLQDIPQLEEKYGEKIARSIISALQTKVF 472 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 +R ++ A+ + +G+ E + + S G + RDG S + +V S+I LP Sbjct: 473 YRVNENETAKRMSEILGQMEVAEKNMSRSMGVNDSRDGDSFITQRRERFIVLPSEIMKLP 532 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 DLT Y+ +PG YP K++ KY K P FI R E +SA A E + + Sbjct: 533 DLTGYLRVPGDYPVTKITQKYHPHLKNVPAFIER----ENMGFISAFAVAEALESQSNSD 588 Query: 602 LFEPDV-PEVVSGEDVTQAEQPQQPVSP---AINDKKSDSGVNVP--------------- 642 EP V + G + P S N + N P Sbjct: 589 GKEPLVEQQNEEGNFFGNSTVPLVGNSSFFGKSNTTSENIYENSPLDLFHSQTEDSDLSL 648 Query: 643 --AGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQ 692 GI+ + + E+E P + + + A+Y A E+ +Q+ Sbjct: 649 NEKNGIQPDEIIPDEDE-----KPKVVNNDRLHTFASYLAATDES--SVQKN 693 >UniRef50_B0RKL6 TraD n=2 Tax=Yersinia RepID=B0RKL6_YEREN Length = 690 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 174/681 (25%), Positives = 301/681 (44%), Gaps = 25/681 (3%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLV-LWIKISWQTFVNGCIYWW 62 + ++T+GGQ + +RM QI + Y + ++G V + +S +T + + Sbjct: 10 SLVELTRGGQTLTHFLRMLYQI--LSRYIKIVLLAYVIGSVGIGYFLSSETDLKMGSQYA 67 Query: 63 CTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVI 122 + L K+ I GK+ + Q++ M E + L A+ +L + Sbjct: 68 ISAFRVEYLLDKNVKTQLILPSGKSVTVTHGQIVSSPTMKNHFEIIKGKIYLGAIASLFL 127 Query: 123 CLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK---DVARMLKKDGKDSDIRIGDLPI 179 + + L ++GK +++E G + + + V LK S + ++P+ Sbjct: 128 SALVAVFLFRYLRKRGKNDAKDEHIRGAAIGNKEELISAVKEKLKTAHLPSRYSLNNVPL 187 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILN 239 + E + L G+ G GKS VIR + R D VIYD SGEF K +Y D ILN Sbjct: 188 LPAQECTSILLAGSPGVGKSTVIRDILRQGRIHNDKAVIYDISGEFTKRFYRKGFDVILN 247 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN- 298 P D R +W LW E + ++ + IP K DPFW + + +F+ + N Sbjct: 248 PFDKRTHSWTLWNEGRNEIAYNRLSQAAIPPVDKGDPFWSMAPQLVFSSIMDELGNRSET 307 Query: 299 RSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 S+ L++ +L + +KL + + A + +EK A S+RAV+T Y + ++YL + Sbjct: 308 PSHEHLMNIILRMSDDKLAQVVAHQDARTVFNLDVEKMAGSLRAVITAYTRNLKYLSHM- 366 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR 418 G F+ RDW R + + W+F++ D ++ ++MW+ A +L++ + R Sbjct: 367 -TGPQFSFRDWARNEDDRR---WVFLTVRDDLKVTMMSALTMWIESACSAILSLEPSDVR 422 Query: 419 RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNT 478 R+ DE+PTLH +P L++ RKFG + G QS +QL + YGE +L D Sbjct: 423 RILCAFDEIPTLHPIPSLLDFSGTGRKFGAVPILGFQSNSQLLEKYGEHRTKTLTDAAGV 482 Query: 479 RAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQ 538 F A + A ++G E +A+E +S GA VRD + + + + L+ YS IQ Sbjct: 483 FMGFSIKGSDGASWIAKQLGNSEIEEATENFSIGAADVRDTTNVNRTTQERELLLYSQIQ 542 Query: 539 SLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD------------INPEMENRLS 586 L DL C + + P KL K+ P +A D I E + + + Sbjct: 543 GLEDLHCLIRMGNGLPVTKLEYKHDNMPTIANAIEETDIFKAQTFQTEFHIEKETDAKST 602 Query: 587 AVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGI 646 + A+ + L + + + + +Q S + + N P I Sbjct: 603 VEGVIKHAKANNINDLLSWEAHKAIKEKQDAARKQATTGNSSTTDSDSENKPFNSPQNKI 662 Query: 647 EQELKMKPEEEMEQQLPPGIS 667 E+ + K EE+ + P I+ Sbjct: 663 EEAIS-KAAEEVNKNASPSIT 682 >UniRef50_Q0HXY0 Putative uncharacterized protein n=1 Tax=Shewanella sp. MR-7 RepID=Q0HXY0_SHESR Length = 657 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 187/649 (28%), Positives = 307/649 (47%), Gaps = 17/649 (2%) Query: 6 KDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLV-LWIKISWQTFVNGCIYWWCT 64 D +G +M + I ++ + I+ GL+ LWI N Y W Sbjct: 10 GDFVRGADTWLHSQQMLLF-SGIWIFLPGVLLAIVGGLLYLWIDADKCVLQNTSTYLWAQ 68 Query: 65 TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL 124 L+G+ S V + ++ V+++ + +L +F A V+ L Sbjct: 69 -LKGLVQPFSSVTVGTCVALDGRESLPSSVVINEPLFQEAAVKLLKSFGWAFSSLFVLYL 127 Query: 125 ITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE 184 + ++GK+ E++ G +L + K +++K G SD+ +GD P+ Sbjct: 128 PIGVYLVVKAVKRGKEIKEDKYIRGAKLVSSEKLKGEIVEKHG-ASDLTLGDFPLPTGFS 186 Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDAR 244 ++ + GT GAGKS + L R RGD V+YD+ GEFV+ +Y +D ILNP D+R Sbjct: 187 KKHTLISGTTGAGKSTALTHLLKAIRARGDRAVVYDKKGEFVEMFYRDGVDHILNPADSR 246 Query: 245 CAAWDLWKECLTQPDFDNTANTLIPMGT--KEDPFWQGSGRTIFAEAAYLMRNDPNRSYS 302 W W+E ++ D D A TLIP DPF++ S R +F+ + D RS + Sbjct: 247 SHQWTPWEEMVSPFDADWIAETLIPESKSNGGDPFFRDSPRHVFSAVLQKLYLDGFRSLT 306 Query: 303 KLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 L+ +E L + +PA E EKT SIR+ L N V +R L+ + G Sbjct: 307 TLLQATAWSDLELLTELVAGTPAETHFSEGNEKTLASIRSTLVNGVLPLRLLKECDSRGF 366 Query: 363 PFTIRDWM-RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 F+IRDW+ +G + + WLF+ KP+IS W+ +GL+A G N +R +W Sbjct: 367 -FSIRDWIAQGDEQGADDSWLFLPVRESEIEIQKPLISTWIQSVAKGLMACGVNNDRTLW 425 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 DELP+L K+P L ++ E R FG V GIQ QLE+ +G+ + ++ + +T+ Sbjct: 426 IVVDELPSLKKIPALSMLMAEGRGFGAAVVLGIQEINQLEEEFGKNTSKTILGLCSTQLH 485 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 FR + AE+ + +GE E + E +Y AD +RDGV + + +V S+I LP Sbjct: 486 FRLNNADTAEWVSKVLGEAEREEVDEDLNYSADDIRDGVRVSSKRQNRKIVLPSEIMDLP 545 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 DL+C+ + G ++ + + PK+A FI D N + RL L A A + + Sbjct: 546 DLSCFAKIWGVESKARIDIPFLRLPKIADGFIQGDENETVGMRL---LNAARALKMEADT 602 Query: 602 LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL 650 F P G +V++ + PA++D + + + G++ +L Sbjct: 603 DFAPKELSNKHGTEVSKGQL------PALSDIEQEVHSVLGTDGMDDDL 645 >UniRef50_Q1NH25 TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25_9SPHN Length = 668 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 174/665 (26%), Positives = 313/665 (47%), Gaps = 32/665 (4%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKIS-WQTFVNGCIYWW 62 T+GGQ +RM +Q+ F +L G+ +W+ + W N Y Sbjct: 8 TLGSWTRGGQAIVHNVRMTTQV---------FFQTLLAGIAVWVGGTIWYVLENSTDYQR 58 Query: 63 CTTLEGMRDLIKSQ-----PVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAV 117 ++ + +KS PV G+ + + +L + + + V A Sbjct: 59 FVAVKIVEATLKSDVPGGAPVLFRTPSGRQYWTTSDALLGSRIAKKTLQAMEHHLVYGAA 118 Query: 118 VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL 177 +A L+ + R G+ N+ G + + + R+L + ++ IG + Sbjct: 119 LAGAFALLMLAWAWFYFTRTGRGLGSNQFLRGARF-GTARQLRRLLWRS-RNGSFAIGGV 176 Query: 178 PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKI 237 P+ E ++ + G G GK+ +I ++ + R++G ++YD +G FV+ +Y P+ D + Sbjct: 177 PVPDAFEPEHILICGAPGTGKTNIIVKMLDGMRKQGKRAIVYDTAGTFVEKFYRPNHDIL 236 Query: 238 LNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP 297 LNPLDAR W W + +D A + IP DPFW + R + Sbjct: 237 LNPLDARADCWSPWVDVPRDYHYDQIAESTIPEKGG-DPFWAKAARGTLVAVLRKLARHE 295 Query: 298 NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 S L++T+L ++ L ++ + AA + + ++T+ IRA L + +++ YL Sbjct: 296 RTLISVLLETVLRTPLKTLASFAEGTDAAAFISMEGDRTSAGIRAELASVMRSFSYL--- 352 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 + + F+IRDW+ ++ + WLFI+ AD SL+P++++WL IAI ++++ +R Sbjct: 353 DDTADGFSIRDWV---ANEEDDSWLFITVKADQLPSLRPLVTVWLDIAISAIMSLPPDRK 409 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RR++ DELPTL KLP L + L ARK+GGC + G QSY QLE YG + AA++ + Sbjct: 410 RRLYCVIDELPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCS 469 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 T R+ A+ + +G+ E ++A+E SYG + +RDGV+ + + LV ++++ Sbjct: 470 TWVALRANDTPTAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRTQVTRPLVMHTEV 529 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR-----DINPEMENRLSAVLAAR 592 +LP+L ++ P V+ + +Y P F+ R ++PE E ++ + Sbjct: 530 TNLPNLAGFLRFGRNLPVVRFTDRYNVLPSPQAAFVERLVPPVRLDPEAEGESASKPSGS 589 Query: 593 EAEGRQMASLFEPDVP-EVVSGEDVTQAE-QPQQPVS-PAINDKKSDSGVNVPAGGIEQE 649 + R+ + P++P EV Q E PQ P S PA D + G Sbjct: 590 PPKRRRPKKMEAPELPLEVDDSRSPAQDEVSPQGPSSGPAEGDIGNADRGLPKLLGRASG 649 Query: 650 LKMKP 654 +++ Sbjct: 650 FRLRQ 654 >UniRef50_A1WDH0 TraD n=3 Tax=Burkholderiales RepID=A1WDH0_ACISJ Length = 665 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 175/667 (26%), Positives = 296/667 (44%), Gaps = 23/667 (3%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVL--WIKISWQTFVNGCIYW 61 +A ++G ++ + R+F ++ + IL GL + + T Sbjct: 9 SAGSFSRGAELWMHQARLF-----VVAIWTVVLISILAGLAVTTAYFWNATTADEKYALE 63 Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 L + E+ G+ +M ++V +E W + L+ Sbjct: 64 RNVLAHTRDALYMTAGKMELNVNGELRKMEVSEVAL--LTDEMAEDAWRKLRNGGMFGLL 121 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 + F++S G+++ ++ G +L + K++AR+++ + S I +P+ Sbjct: 122 TSIGVVFLISLYWWGYGRERMQDNQLRGAKLVEG-KELARLIRHRDEASPYEIAGVPMRV 180 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPL 241 SE + G G GKS+ L R RG +++YD +GEF +++Y D ++NPL Sbjct: 181 KSETLHTLFAGAQGTGKSQQFFALMKQVRARGKRMIVYDPTGEFTQAFYREGKDILMNPL 240 Query: 242 DARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY 301 D+R W++W E FDN AN LIP + DPFW +GR + + ++ + R+ Sbjct: 241 DSRSPNWNIWNEIAKDYHFDNMANGLIPDPAESDPFWALAGRMVLKDVIAVLGREGRRTN 300 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 L + + ++ + L+ + A V+ E+T +S++ + N ++A R+L G Sbjct: 301 RDLYNAIAKSNLDAMHALLQGTAGATYVDPTTERTGMSLKMTVQNQLEAFRFLPD---EG 357 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 E F+IR W+ ++ + W+FI++ +LKPV+S+W+ AI+ +L + R+W Sbjct: 358 ESFSIRKWV----HEEGDSWMFITAREAMREALKPVLSLWIDTAIKAVLDLEPIHRERLW 413 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 F DELPTL KL L L RK+G C V G+Q ++QL +IYG A ++ T+ Sbjct: 414 FCIDELPTLQKLDILKLALTNTRKYGLCMVLGVQDFSQLYEIYGHDLAKTIISGCQTKLL 473 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 R A+ A +G+ E + E SYG RDGVS + + LV S+I +LP Sbjct: 474 LRVTDGAAAKLLAELMGQAEVDEKDETLSYGLSSQRDGVSVMARRQMRDLVLTSEILTLP 533 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 D+T Y+ +PG YP ++ Y K A FI RD + AA A A Sbjct: 534 DMTGYLLVPGDYPIARVKYGYVPTEKQANGFIERDG--FAISFKPTTAAAAPAPAPSAAE 591 Query: 602 LFEPDVPEVVSGEDVTQAEQP-QQPVSPAINDKKSDSGVNV---PAGGIEQELKMKPEEE 657 + +P PE D + P V N D PA + + + Sbjct: 592 VQQPAAPEQGDMLDDDDMDAPATVEVMRNENGDVIDKATGEIIKPAEKVSRAKDDADAKS 651 Query: 658 MEQQLPP 664 Q P Sbjct: 652 AGQGKKP 658 >UniRef50_Q2G6A0 Type IV secretory pathway VirD4 components-like protein n=7 Tax=Sphingomonadales RepID=Q2G6A0_NOVAD Length = 798 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 173/723 (23%), Positives = 294/723 (40%), Gaps = 53/723 (7%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 M N + T+G Q+ FS + L I +++ W IS + Sbjct: 1 MKRNLVNFTRGSQLLGH----FSFMFAAGLKGPLIVAALVISWTSWWTISAGLTDHEVYL 56 Query: 61 WWCT---TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAV 117 W + G + ++ + +G T + AQ+ ++ E+L + A Sbjct: 57 VWMRIYAAIYGFMEFDAAKRITLETAFGATIQFPIAQLESYPPVVHAWEKLTALLTSALW 116 Query: 118 VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS------- 170 + + + F V W R G + E + G L P+ V + + ++ Sbjct: 117 RSGFLLVPVFAVFYWFAERFGGRSKERKHERGAMLVTLPELVDELTAHNRRERTRELDSA 176 Query: 171 --------------------DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR 210 I + E + L GT G GK+ I + AR Sbjct: 177 LGWKWRLSLPREIARVFPYRPSHIATVSYPWRLEQSHAMLIGTTGMGKTVAISDMIAEAR 236 Query: 211 QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP- 269 +G V++D +G F++ ++ D ILNPLDARC W L+ EC ++ +F A+ L+P Sbjct: 237 AKGQRCVVFDLTGAFIEHFHAAHCDIILNPLDARCPQWSLFDECRSEGEFWAAADALVPH 296 Query: 270 MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV 329 G E FW + R +F E + + + L L++ + ++ +R + A L Sbjct: 297 DGGGEAQFWVIAARALFVEFCLKLVAEGRATNDALARELMTADLSRVHAMMRGTIADPLT 356 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED--QKNGWLFISSN 387 + + A SIRAV KA++ L G F++R W+ + + LFIS+ Sbjct: 357 APEAARMAESIRAVFNVNAKALKLLPTA---GPRFSVRQWIEDGADSATSEGSILFISAR 413 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + ++++WL A+ L+ M R+ + WFF DEL LH+LP L + L AR FG Sbjct: 414 YVDMSVCAQLLTLWLDTAMNTLMTMPRTRDLKCWFFVDELGALHRLPALEKGLQTARNFG 473 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 G V G+ +YA+L+++YGE A +L + T+ + + A + + IG ++ E Sbjct: 474 GAIVLGLHAYAKLKEVYGENMAMTLASLARTKLILGTADRETATWCSDFIGHRQVRDMEE 533 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 Y+YG + RD VS + L+ + +LP L+ Y+ P +PA + LK RPK Sbjct: 534 GYTYGYNNARDAVSLTPRKHIEPLLLPDQLMNLPRLSGYIKFPDGFPAAPIKLKPVDRPK 593 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 A FI R ++ A + Q P E S D + Sbjct: 594 RAETFIAR-----VKESPKARVTVPHPAAEQAEQKAAPTGSEHPSSNDDGAGKPVVPKQG 648 Query: 628 PAINDKKSDS----GVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQ 683 D+ + + PA I + ++ P + +++ P S D A +Q Sbjct: 649 ELALDQGPKAAPRQEPDAPAKDIGRAVEHPPGKTSKEREPAARSGQ----DKAGKARKEQ 704 Query: 684 ENH 686 N Sbjct: 705 SNT 707 >UniRef50_D0SGZ6 Type IV secretory pathway protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGZ6_ACIJO Length = 657 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 172/628 (27%), Positives = 303/628 (48%), Gaps = 27/628 (4%) Query: 41 VGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYY----GKTFRMNAAQVL 96 +GL L++K+ N Y T LE + P EI+ + + + A+ + Sbjct: 1 MGLFLYLKVD-----NTQFYAIKTELEIAYKSTLNVPNKEIELFINGVPEKVSIKEAEQI 55 Query: 97 HDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNP 156 + Y+ W A A ++ L++ + + W G+ E+E G +L + Sbjct: 56 IEPYL----SSFWWAVERALLIGLILSISIVGGLIWYWYNYGRDVMEDEQLRGAKLVEKE 111 Query: 157 KDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV 216 K + +L + + + I +PI + +E N C G +GKS+ IR L R RG Sbjct: 112 K-LIELLNQRDEANHYTIAGVPIRKGTEGNNICCVGAPQSGKSQAIRALLAQIRARGKKA 170 Query: 217 VIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP 276 V+YD SGEF + ++ D ILNP D RC W +W E D+ + LIP+ D Sbjct: 171 VVYDPSGEFTQEFFREGKDIILNPFDERCPQWSVWNEVEEDHHIDSIGDGLIPITPTGDQ 230 Query: 277 FWQGSGRTIFAEAAYLM-RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEK 335 F+ + R + ++ ++ +N+ ++ +L +++ +++L L + A V+ K EK Sbjct: 231 FFPPAARRLISDVIRVLGQNEATKTNKRLFESISLSTLQELHEMLAGTSGATYVDPKTEK 290 Query: 336 TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 T I+I+ + NY+ R+L+ GE F+IR+W+R ++ + W+FI++ + ++K Sbjct: 291 TGINIKMQILNYLTPFRFLKD---EGEKFSIREWVR----EEDDSWVFITTKEEQKEAIK 343 Query: 396 PVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 P+IS+W+S I+ +++ R+W DE+PTL K+ DLV L RK+G C++ G+Q Sbjct: 344 PIISLWISTVIKATMSLPAIHKERMWLCIDEMPTLQKMDDLVLSLTNTRKYGLCHLIGLQ 403 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 ++Q YG+ ++++ + T+ R AE + IG+ E + + S G Sbjct: 404 DFSQSVHTYGKDVSSTIISTLQTKLILRVTDSDSAEKLSKIIGQMEVDEKNMSRSMGVTD 463 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 RDG S + + +V ++I +LP+L Y+ + G YP K+ +Y K + FI R Sbjct: 464 GRDGDSFYGQRKERNVVMAAEIMNLPNLVGYLKIVGDYPVTKVITEYVPHTKNSEPFIAR 523 Query: 576 D--INPEMENRLSAV-LAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIND 632 N E+ + L+ V LA EA+ +Q S + E + E++T Q +S Sbjct: 524 KKAYNEEVVSELTNVNLAQEEADRKQKESAIVQNTEEKLEDENLTIDSPVIQNISDESVV 583 Query: 633 KKSDSGVNVPAGGIEQELKMKPEEEMEQ 660 SDS ++Q K E+ EQ Sbjct: 584 VDSDSESKTETLVLDQ--KTGDGEDSEQ 609 >UniRef50_Q6MB84 Putative conjugative transfer protein traD n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB84_PARUW Length = 556 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 179/571 (31%), Positives = 292/571 (51%), Gaps = 28/571 (4%) Query: 5 AKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCT 64 + +T+GGQ+ + +RMF Q+ + F+ WI+V L ++ N + Sbjct: 4 FQTITEGGQLTTHSVRMFKQVTKTSFFITFVL-WIIVFLYQMRDVNTFYLQNVLYFEQAR 62 Query: 65 TLEGMR-DLIKSQPVYEIQYYGKTFR-MNAAQVLH------DKYMIWCSEQL-WSAFVLA 115 + + D IK P + +Q + + QVL D++ ++ SAF Sbjct: 63 FYQVLHIDTIKVDPSFGLQRGSQDVKEYTTDQVLRLTKPYADRFYRITKQRFQHSAFWAL 122 Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 A +++V + F +G+Q + G L+ + LK + S I IG Sbjct: 123 APLSVVFAIFFF---------RGRQSIKKHHLKGNTLSSVWLTRWK-LKLSRRASPISIG 172 Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSID 235 LP+I+ +E Q+ + G G+GK+ + L RQ+ +I D +G + YY D Sbjct: 173 SLPLIKGTETQHIMITGGTGSGKTNCLHHLLKSVRQQKQRAIIVDTTGLLTERYYRAGKD 232 Query: 236 KILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMR 294 +LNPLD+R A W W EC+ + + A + IP + D +W+ S R + ++ Sbjct: 233 ILLNPLDSRGAPWHPWIECIDKTSYATMAESFIPQSLSDSDNYWRTSARIVLGSLFEQLK 292 Query: 295 NDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYL 354 + + S L D +L +++L +++ + AA+L++ EKTA SIRAV++N++ L Sbjct: 293 DI--QKNSTLADKILRDPLQELCDFVQGTKAASLIDMNSEKTAASIRAVMSNFLTCFELL 350 Query: 355 QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 + PF+IR+W++ +ED + WLFIS + A+L P++S WLS+A+R LLA+ Sbjct: 351 ANTDQ---PFSIREWIQ--QEDPIDNWLFISCKTNERAALNPLLSCWLSVAVRSLLALPP 405 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 N RR+W+ DELPTL++L DL +L E+RK+GGC V +QS AQLE IYG+ A +L Sbjct: 406 NFERRLWYIIDELPTLNRLRDLDMLLAESRKYGGCAVLALQSPAQLEAIYGQAVAQTLIG 465 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 T+ F + A A GE+E + + SYGA+ +RDGVS + Q L++ Sbjct: 466 NCATKIVFAEQNPLHAGRLADMFGEQEIREYQKGLSYGANDIRDGVSLNQQTRYQQLITK 525 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR 565 +DIQ L +V LP P V+L++ R Sbjct: 526 TDIQFLSRNQAFVRLPDNCPIVRLNVPILPR 556 >UniRef50_A4XE63 Type IV secretory pathway VirD4 components-like protein n=5 Tax=Sphingomonadaceae RepID=A4XE63_NOVAD Length = 776 Score = 505 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 186/738 (25%), Positives = 320/738 (43%), Gaps = 61/738 (8%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 M NA + T+G Q+ + M+ A + L F F I + +VL + + + V + Sbjct: 25 MPRNAGNFTRGSQLITHEFLMWFSSAKMPLLVWFFTFLIALSIVLALLL-HEHEVQMILM 83 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + + + G+ + + ++ +L A + ++L Sbjct: 84 RIYAEGWSFMEFSPRKILNLTLPSGRVIPAPVSMIASHPDVVIAWNKLMRAIWGSLFISL 143 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARML----------------- 163 + + + ++GK E G L D K++A ++ Sbjct: 144 FVAVPLSVWFIDLSRKRGKAILEERHQRGAMLVD-AKELAAVINQHNSAALAQEIAERMP 202 Query: 164 ---------------KKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANY 208 K G I + SE + + G+ G GK+ +R + Sbjct: 203 GKTMDDVMKMSFAERKAAGIHHVYNIAGVSFPWRSEQAHTIMIGSTGTGKTTQMRDMIAQ 262 Query: 209 ARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI 268 R R D V++D +G +V+++Y+P D ILNP+D RC +W L+ E DF A+ ++ Sbjct: 263 MRVRQDRAVVFDLTGAYVEAFYNPETDTILNPMDERCPSWSLFDEGKNYADFTAIASAIL 322 Query: 269 P-MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN 327 P G DPFW RT+F + + + + L L+ +E++ LRN+ A Sbjct: 323 PTDGGGSDPFWMLGARTLFVQTCVQLMKLGQATNAALAYRLMMADLEEVHELLRNTIAEP 382 Query: 328 LVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 L + A S+RAVL +A+ + I EPF+I DW+R +D+ LFI+S+ Sbjct: 383 LTAPVAARMAESVRAVLNTNAQALLF---IPEGKEPFSICDWIRH--QDKPGSILFITSS 437 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + + ++S+W+++A+ L+ + R+ R WFF DE+ LH+LP + + L AR FG Sbjct: 438 HNELVLNRALLSLWMNLAVHTLMRLPRTRSLRTWFFFDEVHALHRLPAIEDGLQTARGFG 497 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 G +V GI S+A+L + YG++ A +L + T+ + AE + IG +E E Sbjct: 498 GAFVLGIHSFAKLAETYGKEGAQNLASLARTKLILAAADRDTAEHCSDYIGHREVRMMDE 557 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 YSYG +RD + E Q LV DI LP L ++ P + A ++ L Y+ PK Sbjct: 558 AYSYGYSNIRDAATITPRSEVQPLVIPDDIMRLPSLRGFLVFPEGFDAARIRLTYKDYPK 617 Query: 568 VAPEFIPR-DINP-EMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQP 625 VA +I R ++ P E + E GR + EP++ GED+ P P Sbjct: 618 VAEGYILRENVEPIEFISMPKGDDEVAETGGRDRSG--EPELEP--RGEDL--GRDPAVP 671 Query: 626 VSPAIN------DKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYE 679 +SPA+ + D P+ G + +++ + E+ + S E D + Sbjct: 672 LSPALEPDANAPEIMPDGPNPDPSVGKQMAFRLEQAPQNER------TNSRE-QDPSQKA 724 Query: 680 AWQQENHPDIQQQMQRRE 697 + P Q+ + RE Sbjct: 725 EKSSASKPAAQRTVGSRE 742 >UniRef50_A0B526 Type IV secretory pathway VirD4 components-like protein n=3 Tax=Burkholderia RepID=A0B526_BURCH Length = 702 Score = 500 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 185/675 (27%), Positives = 299/675 (44%), Gaps = 13/675 (1%) Query: 7 DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTL 66 ++G + + ++ + ++ + + G L+ S +T + L Sbjct: 12 TFSRGTALWWQQAKLLTSAIVAVVIAAILVGALAGGAYLYFVTSAETRYLTIKHVEAEIL 71 Query: 67 EGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLIT 126 + + P + A L + +++ + AA+ A++ + Sbjct: 72 TVVP---MANPNVSFHLGNDDTALPPAAALS--FTEDAADEFFIYARNAALYAVLTAIAV 126 Query: 127 FFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQ 186 F+ G+ + ++ G +L K++ + L+ S RI +P+ + +E+ Sbjct: 127 TFLSVLFWMEYGRGKLTDKQVRGAKLVK-AKELIKELEARDDASPYRIAGVPMRKKAEVL 185 Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCA 246 G G+GKS+ L + R R ++YD SGEF +YY D ILNPLDAR Sbjct: 186 GTLFSGAQGSGKSQQFFALMDQVRARKKRAIVYDPSGEFTAAYYREGKDVILNPLDARSP 245 Query: 247 AWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLV 305 W+ W+E ++ +D A LIP+ DPF+ +GR +F A + D R+ + L Sbjct: 246 NWNAWREIQSEIHYDGLAEGLIPIPPNVADPFFAIAGRMVFKGAIRALGGDNKRTNAALY 305 Query: 306 DTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFT 365 + +E+L L N AA V+ E+T +S++ + N + RYL GEPF+ Sbjct: 306 KAIAHSNLEELHAILANESAATYVDPVTERTGMSLKMTVQNQLDCFRYLHD---EGEPFS 362 Query: 366 IRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCD 425 IR+W++ ED + WLFI+ N + +L P+IS+W IAIR LL + R+W+F D Sbjct: 363 IREWIQNEDED-DDSWLFITVNEEQKTALLPLISLWCDIAIRSLLTLKPIHRERLWYFYD 421 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 ELPTL KL + + RK+GGC+V GIQ ++QL IYGE A ++ T+ R Sbjct: 422 ELPTLQKLEIMKLAVTNIRKYGGCFVLGIQDFSQLFQIYGEHLARTIISGCQTKLLLRVT 481 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 A+ A IG+ + + E + G D RDG+S + LV S+I LPD+ Sbjct: 482 DGDAAKALANAIGQADLDEKEESLNLGIDERRDGMSVFARRNLRDLVLSSEILHLPDMQG 541 Query: 546 YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP 605 Y+ P YP ++ +Y P+ FIPR ++ A A RQ +L P Sbjct: 542 YLVTPSDYPVARVKYEYVPHPQTVTPFIPRQTY-DLWLPAGAAADRPAAPERQSTALPSP 600 Query: 606 DVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPG 665 P G D + + P S A DS N + G + Sbjct: 601 PSPTARFGSDPSPSHSPSPNPSGAPTTAAEDSATNAASAGPAVGAPAPNTSGCVARPSNV 660 Query: 666 IS-ESGEVVDMAAYE 679 IS +GE+VD E Sbjct: 661 ISLSTGEIVDGDTGE 675 >UniRef50_D1RMM8 Type IV conjugative transfer system coupling protein TraD n=2 Tax=Legionella RepID=D1RMM8_LEGLO Length = 665 Score = 497 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 200/668 (29%), Positives = 333/668 (49%), Gaps = 41/668 (6%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQ----------- 52 N GGQI + +M Q++N + + + F +L +++ S + Sbjct: 8 NMWQFMSGGQIFDYKTKMMIQVSNRIFHWAVLGFVVLFSMIMAFYASSELKLVALHHISR 67 Query: 53 ---TFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLW 109 F NG W + +Y K+ + A+ L + +W Sbjct: 68 FLVKFHNGEYVLW---------TNLNGSKITAFFYQKSPLIQASVHLAQET-------IW 111 Query: 110 SAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK- 168 ++ + + L+ + S + G++ ++++ G +L D+PK+ + + + + Sbjct: 112 RKAQISLIFGGAVYLLITLLFSRFFIKLGEKYTKDQFISGTRLADSPKETIKSVNESQRG 171 Query: 169 DSDIRIGD-LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK 227 SDI++ + LP+ + SE Q HGT GAGK++ + L R G+ +IYD+ Sbjct: 172 ASDIKLLNRLPMPKFSEKQGMLFHGTTGAGKTQAMMMLLEQIRALGEPAIIYDKECTIKP 231 Query: 228 SYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIF 286 ++D ID LNP+ CA W +W+EC +F + A LIP DPFW S RTIF Sbjct: 232 YFFDERIDVELNPVSKLCANWKMWRECANPLEFGSFATYLIPKSVQGSDPFWVDSARTIF 291 Query: 287 AEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTN 346 A+ +R+ + L+ LL+ +E++R L+ + + NLV ++IEKTAISI++VL Sbjct: 292 TSMAWKIRDYAEKDPVFLLQLLLTTSLEEIRNILKGTESENLVSKEIEKTAISIKSVLAT 351 Query: 347 YVKAIRYLQGIEHNGE-PFTIRDWMRGVREDQK--NGWLFISSNADTHASLKPVISMWLS 403 Y KA+R+L+G+E +G+ F+I++W+ + +K GWLFI+S + H +KP+IS+WL Sbjct: 352 YTKALRFLEGLEKSGKEDFSIKEWIENTADPKKYNKGWLFITSRSKYHKEIKPLISLWLG 411 Query: 404 IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 +A++G+ ++ N R+W DEL +LH+L + + L + RKFGGC GIQS AQL+ I Sbjct: 412 LAMQGVQSLVANNKGRIWLVMDELASLHRLETISDTLADIRKFGGCVAIGIQSIAQLDFI 471 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 YG A ++ D++NT +FRSP K+A++ + ++G + + E SYG D VRDG + G Sbjct: 472 YGTHEAGAIADLLNTSIYFRSPKSKVAKWVSEDLGPQVINEMKESQSYGPDSVRDGNTVG 531 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN-PEME 582 ++ V DI +L D+ CYV L G +P +L +Y R ++ I R IN +E Sbjct: 532 SQRTKRNTVEEGDIMTLDDMECYVRLVGNHPITRLKNQYIERKEICVPLIERTINFDALE 591 Query: 583 NRLSAVLAAREAEGRQMA----SLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSG 638 L + R FE EV + V +P A +K Sbjct: 592 KVNHRALMVQNNPQRSDDVKKIHQFETLAHEVSDKDLVPPESPYAEPQDQAATNKNDIDA 651 Query: 639 VNVPAGGI 646 + + I Sbjct: 652 IELREASI 659 >UniRef50_A3VMZ9 TraD n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VMZ9_9PROT Length = 679 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 165/663 (24%), Positives = 297/663 (44%), Gaps = 28/663 (4%) Query: 1 MSFNA----KDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVN 56 MS NA K +GGQ+ +RMF Q+ + + + ++ + + + + Sbjct: 1 MSGNASGPFKTFLRGGQVTLHTLRMFGQVMRFLSFAMVSLMLVIAWAGVMVNTAPEDRHY 60 Query: 57 GCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAA 116 + +S + G +L + ++ + Sbjct: 61 AMKRYEAWAYRAA-GFRESLELNMRTADGSHAPFPIGTILTHPAVAEHEKRFRRQLFVWG 119 Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA------RMLKKDGKD- 169 + + F +++ + +G + V G + + A R K+ Sbjct: 120 RIGGLGGGFGFLLLTGLFVGRGSTLTRTNVKRGAAMASAQELKAQIGAHNRWTAMKRKEL 179 Query: 170 ---SDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV 226 + +P SE+Q+ + GT+G+GK++ I L + R+ GD V++D +G F+ Sbjct: 180 RGRPRYALAGIPYPVGSEVQHTGISGTIGSGKTQAIAALLDQIRKAGDRAVVFDLTGGFI 239 Query: 227 KSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIF 286 +Y D ILNPLD R AW ++ E T+ FD A +IP K DP W S R +F Sbjct: 240 APFYREDRDTILNPLDRRAPAWSVFDEAKTKAGFDAIAAAMIPRAQKADPVWADSARMVF 299 Query: 287 AEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTN 346 + A L+ D S +LVD LL+ ++ L + +PAA+++ + S+R +L+ Sbjct: 300 STAGQLLLGDGRASNKELVDLLLNAELRTLAPFFAGTPAASIISADTPRMTNSVRMMLST 359 Query: 347 YVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI 406 Y+ +R L G+ F+I +W+ D+ LF+SS AD H +L+P++++W+ A+ Sbjct: 360 YLDGLRLLP---SRGDRFSITEWIEN---DRAGSTLFLSSRADMHETLRPLLTVWMDTAV 413 Query: 407 RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGE 466 R L++ + NRR+WF DE+ L +LP +++ L R+FG +V GIQ+ +QL DIYG Sbjct: 414 RALMSRPRDPNRRIWFIMDEVAALQELPSIMDGLARGRQFGAAFVLGIQAQSQLRDIYGP 473 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 A +L V T+ + A++ A +G +E +++E S+GA+ +RDGV + Sbjct: 474 DGAQTLSSVCRTKLILAASDADTAKWYADFLGRQETSRSNENVSFGANTIRDGVMLARQE 533 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLS 586 + LV +I +L L Y+ +P +P K+ + R P F+PR+ + R Sbjct: 534 RIEHLVIPEEIMNLRSLEGYLKMPEGFPLAKVKVPLVLREDREPAFLPREDQGLLITRAR 593 Query: 587 AVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGI 646 A + Q + P G+ +E + + I+ + G+ Sbjct: 594 AP---HTVKAMQATAHR----PGSEDGQRDMFSEAERDGIDELIDPDTGEVSATTRVEGV 646 Query: 647 EQE 649 Q+ Sbjct: 647 AQD 649 >UniRef50_C4Z014 Putative conjugative transfer protein TraD n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z014_9RICK Length = 659 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 178/654 (27%), Positives = 301/654 (46%), Gaps = 40/654 (6%) Query: 7 DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIK------ISWQTFVNGCI- 59 D T+GGQI ++RMF Q+ + + F+ +LV + + + +T++ Sbjct: 4 DYTRGGQIFIHKVRMFRQVIGVSSFWSFVIAALLVIFLTMPQYKAINMFAAKTYMRASFI 63 Query: 60 -YWWCTTLEGMRDLIKSQP---VYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLA 115 + W T + D + +P +Y++ + + A +L+ L V Sbjct: 64 DFVWDITPKISEDSKQREPRIDIYDMSIDRASRSVKVATILNTPKYKQSYMILKHYIVST 123 Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 A++A + F+V + + GK + G + +V + LKK IG Sbjct: 124 ALLAAGSTVFLVFLVFVVWSKFGKTARATKHISGSTI-KTASEVKKYLKKHNLIGMFYIG 182 Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI- 234 D+P+I+++E ++F + G+ G+GK+ +I L R ++ D++GE ++ YYDPS Sbjct: 183 DMPLIKNTETRHFLVTGSTGSGKTNLINTLLPQVRTAKHPAIVVDQTGEMIERYYDPSRG 242 Query: 235 DKILNPLDARCAAWDLWKECLT-------QPDFDNTANTLIP-----MGTKEDPFWQGSG 282 D I NPLDAR +WD W++ + P + A L G+ D FWQ S Sbjct: 243 DIIFNPLDARSHSWDFWQDATSNVAIGEVDPRLEKFAKVLFSFDKRSTGSGNDQFWQNSS 302 Query: 283 RTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRA 342 +F + R+ + L L + + L + L+ + AA ++ TA SI + Sbjct: 303 EILFISCVESLIKKDCRTITSLKKILTKVNRQDLASLLQGTRAARYFSKQNTTTAESILS 362 Query: 343 VLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 V+T V+ I LQ + + F+++ + + E N WLF++S+ P+++ L Sbjct: 363 VMTTGVRPICLLQD---SKQQFSLKQYFYNI-EKGSNSWLFLASSPSQREVTLPLLACIL 418 Query: 403 SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 +A+ L+ G N RR+WF DEL +L +L L +L E+RK+GGC + QS QL D Sbjct: 419 ELAVSYLIESGINEQRRMWFVIDELASLGRLNSLSSLLAESRKYGGCVMAATQSLNQLFD 478 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 YG A ++LFD T+ FRS A G E+ + SYGA RDGVS Sbjct: 479 KYGHYAGSTLFDQFATKFMFRSTDPSTARLITDIFGNVEYASQQKNTSYGAHEHRDGVSY 538 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPGP-YPAVKLSLKYQTRPKVAPEFIPRDINPE- 580 + +R++L++ +DI SL DL C+V LP P KL L ++P ++ E Sbjct: 539 TEQEKRKSLITTNDIASLKDLECFVGLPDPQIRITKLQLSPAQVEHKNKGYVPLSLSEEA 598 Query: 581 -MENRLSAVLAAR--EAEGRQMASL------FEPDVPEVVSGEDVTQAEQPQQP 625 +E L + + + + Q+ S+ D+ E+ E + E Q Sbjct: 599 ALEQALKEKVQSHDVDTDNTQLGSMASTGHDINDDINEISDAESEAELEHTQPS 652 >UniRef50_Q3HKI7 TraG n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3HKI7_RHOS4 Length = 760 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 167/633 (26%), Positives = 294/633 (46%), Gaps = 34/633 (5%) Query: 5 AKDMTQGGQIASMRIRMFSQIANIMLY-CLFIFFWILVGLVLW---IKISWQTFVNGCIY 60 +GGQ RM +Q+ L+ L F LVL ++ +TF + + Sbjct: 9 PTQFVRGGQTTQHWWRMAAQVVRTSLFVALAAFTLTYTALVLANYELRYMRETFASWTAH 68 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + +R + + + + + A Q+ D M +++ L A AL Sbjct: 69 Y------NVRLGRPEKIISYVDHLDRRLERTAGQIAADHRMNALADEYRRNASLFAWYAL 122 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKD----------- 169 V + + I G++ +NE G +L D +D+AR + K Sbjct: 123 VPAAAALLISTAIFAWAGQRVGQNEHVRGSRLIDQ-RDLARWSMRKWKAYQKRFGLGLKK 181 Query: 170 -SDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS 228 I +P ++ + GTVG GK+ I+ L R + +IYDR G V+ Sbjct: 182 GPRYTIAGIPFPPNAVEAQTGIFGTVGVGKTNAIKELLTTIRAQNGRAIIYDRMGGLVRD 241 Query: 229 YYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKE-DPFWQGSGRTIFA 287 +YDP+ D I+NP DAR W + E T A +IP + DPFW + R +F Sbjct: 242 FYDPATDIIINPFDARSHIWSPFGEASTPEALAQIAEVMIPQRPGQNDPFWSQTARLVFE 301 Query: 288 EAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNY 347 +A + + + L +++I E+L L +P A+ + +EKT+ SIRA N Sbjct: 302 YSARSLLRAKRPTNADLRRAIMTISAEELEKLLAGTPGAHFFGKHVEKTSASIRA---NM 358 Query: 348 VKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 + +R+L+ + +GE F+ R+W++ ++ G++F++ +A+ A+ + +IS + ++ Sbjct: 359 IAELRFLEFLRDDGELFSAREWVK----SERPGFVFLTGDAEHSAATRNIISTIIEVSAN 414 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L+ E+R+ +VWFF DE+P+L++LP L L E R+FGG +V G Q +AQLEDIYGEK Sbjct: 415 ALMTCEESRDPKVWFFLDEVPSLNRLPFLQSKLAEIRQFGGAFVLGYQVFAQLEDIYGEK 474 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A ++ +N R F +P + A+ + +G ++ ++ E S+GA RDGV+ Sbjct: 475 GAQAIAGNLNNRIVFNTPDARTAKLFSESLGFEDVVEQRENLSFGAHESRDGVAFMSQRT 534 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD---INPEMENR 584 + +V+ S+IQ+LP + P ++ + A + +P + + Sbjct: 535 ERPIVTASEIQALPQFEALIRFAYDAPTARVRFEPVQVEPKAEKIVPYQGGGFALDAMDP 594 Query: 585 LSAVLAAREAEGRQMASLFEPDVPEVVSGEDVT 617 A A A+ +A+ + P++ V E Sbjct: 595 HKAPAPAPAADEASLATRYAPELLGKVQEERRA 627 >UniRef50_A5CC23 Conjugative transfer protein n=48 Tax=cellular organisms RepID=A5CC23_ORITB Length = 585 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 178/581 (30%), Positives = 295/581 (50%), Gaps = 34/581 (5%) Query: 1 MSF-NAKDMTQGGQIASMRIRMFSQ-IANIMLYCLFI-FFWILVGLVLWIKISWQTFVNG 57 M+F N + T+G Q+ + ++RMF Q AN+ L + FWI+ L +Q Sbjct: 2 MNFQNQGNFTRGSQLFAHKLRMFGQGSANVFTIGLGLSIFWIICRL-------YQKVFLS 54 Query: 58 CIYWWCTTLEGMRDLIKSQPVYEIQYYGKTF---------RMNAAQVLHDKYMIWCS--- 105 +Y++ L + Y+I G F +NA LH+ Y Sbjct: 55 SLYYFAIERYVQLKLTIGEHFYDIDQIGIVFYSLRFKKWIHLNAQDFLHEFYTGQHGFKI 114 Query: 106 EQLWSAFVLAAVV-ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLK 164 +QLW + +A++ L++ I + QGK+ G + +++A+MLK Sbjct: 115 QQLWEFLINSALLEGLIVFAIGVIISIVFFTAQGKKTIIKAKIRGADFVRS-RNLAKMLK 173 Query: 165 KDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE 224 K S I G LP++++SE + + GT G GK+ ++ L R + D +I D +G Sbjct: 174 SAKKASKICFGGLPLVKNSERLHILITGTTGTGKTNMLNELLPQIRSQQDRAIIIDLTGA 233 Query: 225 FVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRT 284 F ++D DK+LNPL+ W W +C DF + A++ + D F+ + Sbjct: 234 FTDRFFDSKCDKLLNPLEKNSEQWLPWNDCFEAADFHDIASSFSNYTHRIDDFFAKNAEL 293 Query: 285 IFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 + +EA L ++D + KL+ T++ + RN+ + ++ E +T+ I++ L Sbjct: 294 VLSEALKLYQDD--KDIIKLIHTIIYSDNRQFVKAFRNTAVSGIISESAPETSAGIQSTL 351 Query: 345 TNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 + +++YL+ G F+I++W E GWLFI++ A+L+P+IS W+SI Sbjct: 352 GKNITSLQYLKP----GGNFSIKEWFSNSAE---TGWLFITATPSQRATLQPLISAWISI 404 Query: 405 AIRGLLAMGENRNRR-VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 AI+ L+ N + + +WF DELP L K+ L L E+RK+GGC+V G+Q+ QLE I Sbjct: 405 AIKALMCRNPNHDNKNIWFILDELPALQKVSSLPVALAESRKYGGCFVAGLQNIHQLEAI 464 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 YG AS+ D+ N++ FR A +A +GE+E ++ E SYG++ +RDGV+ Sbjct: 465 YGSAECASMLDLFNSKFIFRVSDQVTAYKSALTLGEEEIIETQENLSYGSNTMRDGVNMN 524 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 ++ LV S+I +LPDLTCYV L G +P KL++K Q Sbjct: 525 NVERKKLLVMPSEIMNLPDLTCYVKLVGNFPITKLTMKLQN 565 >UniRef50_Q1N8W8 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8W8_9SPHN Length = 762 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 165/735 (22%), Positives = 309/735 (42%), Gaps = 52/735 (7%) Query: 3 FNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWI--LVGLVLWIKISWQTFVNGCIY 60 NA D T+G Q+ ++MF + + Y + F + + L++W +Y Sbjct: 25 RNANDFTRGSQLFVHELQMFGEGLKVPFYIILSIFALSAVTALMIWYSHKEFYLAFMRVY 84 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + + +PV GK V + +L + + + ++ Sbjct: 85 SALWSYF---EFDPEKPVELHLLNGKIGHTTMQYVSLVPEVRQSWNRLLNVLFSSFMFSV 141 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN------------------------- 155 +I ++G + ++ G L D Sbjct: 142 MIGYPASIWFVQHSKKRGNEILQDHHERGALLVDQTILDTNVRSYNSRQAFVEWEREDPA 201 Query: 156 -------PKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANY 208 K R ++G + LP +E+ + G+ G+GK+ + + Sbjct: 202 NRTAAKWAKMSNRERHQEGVHFPYLLAGLPYPYKTEMAHTMFIGSTGSGKTVQMLTMIEQ 261 Query: 209 ARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI 268 +++RG+ V++D +G++V+ +Y+P D ILNP D RC +W ++ +C + AN L+ Sbjct: 262 SKKRGNKAVVFDLTGQYVERFYNPETDIILNPFDVRCPSWTIFNDCPGYVEMTAAANALV 321 Query: 269 P-MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN 327 P G +PFW + RT+F E +R++ + + L++ ++ + LRN+ A+ Sbjct: 322 PSDGGTGEPFWVQAARTLFVEMCEKLRSEGRTTNRDIARRLMTADLKTIHESLRNTIASP 381 Query: 328 LVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 + + + A SIR+ +A+R+L G+ F+I +W+ D LFISS Sbjct: 382 ITSTEAARMAESIRSTFVTNAQALRFLPDA---GKRFSITEWL---ASDVPGSTLFISST 435 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + ++++WL IA++ LL M R R WFF DE+ LH+LP + L AR +G Sbjct: 436 YSDLQLTRQLLTLWLDIAVQRLLIMPRTRQLRSWFFFDEIHALHRLPAIENGLQTARGYG 495 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 G +V G+ S+ +L + YGEK+A +L + T+ + AE + IG +E + E Sbjct: 496 GAFVLGLHSFDKLAETYGEKSANTLAALARTKLILTTADTTTAETCSAFIGSREVRQMDE 555 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 YSYG +RDG + + + LV D+ +LP L+ YV +PA ++S ++ P Sbjct: 556 GYSYGISKMRDGSTVTPTTKVEPLVLPDDLMNLPSLSGYVKFAEGFPAARISYPFKDWPV 615 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 AP F+ R + + A+ E + PD G ++ +Q + Sbjct: 616 QAPGFLRR----QNIRPIEAMYELGRTEQTANSFGTPPDA--NAEGGLTSKPDQLIGVPT 669 Query: 628 PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQ-ENH 686 A++ D + + Q+ + P E+M ++ ++ ++ + N Sbjct: 670 DALDIMGGDDNMPLFEEYERQQ-REAPVEQMRGNAEERRTDPETTLEQQQSDSSRDHANQ 728 Query: 687 PDIQQQMQRREEVNI 701 D + E + Sbjct: 729 TDFARDRTSSERAQL 743 >UniRef50_C5SIG6 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIG6_9CAUL Length = 871 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 140/547 (25%), Positives = 246/547 (44%), Gaps = 28/547 (5%) Query: 173 RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP 232 RI + + +S Q+ + G+ G+GKS+ I L R + +IYD E+++++Y Sbjct: 316 RIVGVELPINSLYQHSLVVGSPGSGKSQAIHGLIESINHRRECAIIYDPELEYIRAHYKA 375 Query: 233 SIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAAY 291 D ILNP D+R A+W + + ++ A L P +DP+W + R I+ A Y Sbjct: 376 GRDVILNPFDSRTASWSPFNDLADYASWEQAAADLFPLPKGSQDPYWTLASRQIYCNAGY 435 Query: 292 LM-----RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTN 346 + ++ + + + L+ E L +L+N+PA + EK + S+R+V+ N Sbjct: 436 KLGVIKRQHFNEKPTIEELIWLIIGDFETLHYFLKNTPAERTLGEKEGLRSESLRSVIVN 495 Query: 347 YVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI 406 + + +L E F+I +W+ Q +G LF+S ASL P+I+ W SIAI Sbjct: 496 GITRMMHLLN---GREDFSIAEWI---NSPQTHGLLFLSRPQHLEASLSPLIAHWSSIAI 549 Query: 407 RGLLAMGENRNRRV-WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 L +++++ DE +L K+ L + RK+GG + G+Q +QL+DIYG Sbjct: 550 TTLFTRTPAQSKKITHIILDEFHSLGKVEILADAPARLRKYGGSIIMGMQQVSQLDDIYG 609 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 +K A ++ + T+ R A F A +IG++E + E SYGA +RDGVS Sbjct: 610 DKKAQTIIGQLATKLILRCQDPDTARFMAEQIGQREVSRTQENTSYGAHQLRDGVSLNTK 669 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPG-----PYPAVKLSLKYQTRPKVAPEFIPRDI--- 577 + + + +I + P + + P+P + +Y+ R F+PR Sbjct: 670 EQTEFVFMPEEIMNFPMFQGVLRVSNVREGRPFPVAPVKFRYRERSTGTEGFMPRLGPDP 729 Query: 578 ------NPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIN 631 ++L A+L +AEG Q A E ++ S V+ + A + Sbjct: 730 IDEFMKKDRSSSKLYALLDKIKAEG-QGADNREVTAQDLSSSRSVSTPDGKSVSSGAAHS 788 Query: 632 DKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQ 691 D+ D+ GI + E ++++P ++ V + A + QQ Sbjct: 789 DEGFDAQNPEKRAGIAEGFLAPDATEAKREVPDSEIDTRPVAEEGARSQPSPSDTTAAQQ 848 Query: 692 QMQRREE 698 + EE Sbjct: 849 NSKSDEE 855 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 2/160 (1%) Query: 10 QGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGM 69 +GGQ S + M +IA L L ++ + V + G L Sbjct: 18 RGGQTVSHTVEMVWEIAKKFLIMLALWGVFCIYSVNRHATDDEQLYGGLA--IVAKLCRF 75 Query: 70 RDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFV 129 Q V Q G + ++ + Y+ ++ A ++ + Sbjct: 76 FGAPLPQQVTVKQPDGTSVVVSVSDYESLPYVAGVLDRYGELLFYAGLLFFAGAAALLAL 135 Query: 130 VSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKD 169 + + RQG+Q+ E++ G+ + ++ K + + Sbjct: 136 ATILFIRQGQQKLEDKELRGQTIASVASLRQQIQKFNADE 175 >UniRef50_C9NPT6 Type IV secretory pathway VirD4 component n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT6_9VIBR Length = 604 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 180/562 (32%), Positives = 291/562 (51%), Gaps = 17/562 (3%) Query: 23 SQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQ 82 Q+ + L + ++V +S + YW L + +Q + + Sbjct: 18 GQLGATLTIALGVEMMMVVAFHALTSVSGDLWRLEGWYWRVHALYWL--GASTQQIVAVS 75 Query: 83 YYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQS 142 + ++ ++ + W FV A +A+ + L+T I+ R G S Sbjct: 76 DASQAHTWTLGTLMRSPFIELGHARFWRQFVPALELAVGVGLLTMMSFVIIMIRLGVTAS 135 Query: 143 ENEVTGGRQLTDNPKDVARMLKK---DGKDSDIRIGDLP-IIRDSEIQNFCLHGTVGAGK 198 + + G + P + R + + + + +G + E Q+ + GT G+GK Sbjct: 136 RDRLIRGGKQVP-PAQLEREMHRGTSSPSRAPLCLGGFDVLHPHFERQHVRIEGTTGSGK 194 Query: 199 SEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQP 258 S +IR + R RGD V+YD+ FV ++Y P D +LNP DAR WDLW + Sbjct: 195 SVLIREFLAWIRARGDRAVVYDKGCSFVGTFYRPETDVLLNPYDARSVNWDLWADATDAA 254 Query: 259 DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR-SYSKLVDTLLSIKIEKLR 317 DF++ A+ LIP + DPFW S R++FA A +RN+ + +L+ L + + L Sbjct: 255 DFEHQASALIPASPQGDPFWNESARSVFASVARQLRNESRPPTTERLLALLTTSDLTTLS 314 Query: 318 TYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP------FTIRDWMR 371 +L N+ AA V + I+KTA+SI+ VLT Y +++R LQG++ P F+I DW+R Sbjct: 315 NFLANTEAATYVSKDIKKTALSIQTVLTTYARSLRCLQGLDRQDRPAHLRQRFSITDWVR 374 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLH 431 +D G++F++S+A H +L+P+IS+WL+IA +L + E+ RR+W DELP+L Sbjct: 375 ---DDSATGFMFLTSHARHHVALRPLISLWLAIASNAILGLSESHERRLWVILDELPSLQ 431 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 +LP+L L E RKFGGC+V +QS+AQL YG A ++ D++N+R FFRSPSH +A+ Sbjct: 432 QLPELASTLAEVRKFGGCFVISLQSHAQLIKNYGAHDAQAICDLLNSRFFFRSPSHAMAK 491 Query: 492 FAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 A+ E+GE++ + RD S + +++ + IQ+LPDL C+V PG Sbjct: 492 VASQELGEQDIDVVRHGQTLTPRARRDARSRNLQRLTRPIITPTQIQALPDLHCFVRSPG 551 Query: 552 PYPAVKLSLKYQTRPKVAPEFI 573 KL L Y T K P+F+ Sbjct: 552 TDWVAKLVLPYVTVEKAEPDFV 573 >UniRef50_C9CRW4 TraG n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRW4_9RHOB Length = 758 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 159/598 (26%), Positives = 277/598 (46%), Gaps = 23/598 (3%) Query: 21 MFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYE 80 M +Q+ + F + ++ Y W + + + + + Sbjct: 1 MATQVLKYSISMAAAAFSVTYIYLVAQNYEIDKVRLTGTY-WLSKFNVEQRGTEERLLSY 59 Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQ 140 I G+ +A Q+ D+ + ++ +L + + + F VV I G+ Sbjct: 60 IDDDGRRVERSAGQIYADREIAEIYDEYADNALLFMYYSFIPAALAFAVVFGIFAMVGRN 119 Query: 141 QSENEVTGGRQLTDNPKDVARMLKKDGKD------------SDIRIGDLPIIRDSEIQNF 188 E E G +L K++ K+ ++ + + +S Sbjct: 120 LQEEEYIRGARLV-TAKELKAWSKRKWREYEKRFGKGSKKGPRYTLAGIEFPPNSVEAQI 178 Query: 189 CLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAW 248 + GTVG GK+ + L N R+ G +IYDR G ++ +YDP D ILNP D R W Sbjct: 179 GITGTVGVGKTNAMHELLNTIREAGGRAIIYDRMGGLLRDHYDPEKDIILNPFDERSVGW 238 Query: 249 DLWKECLTQPDFDNTANTLIPMGTKE-DPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDT 307 + E ++ F A +IP D FW + R +F A + ++S L Sbjct: 239 SPFNEVVSPEGFAQIAEVMIPDHPGSLDSFWTQAARLVFQYTARELAKKGHKSNDALRKA 298 Query: 308 LLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIR 367 +++I E+L + +P A+ E + KT+ SIRA N + +R+L+ + + EPF+IR Sbjct: 299 IMNIPSEELAEIVAPTPGAHFFGEHVAKTSGSIRA---NMITELRFLEYLRDDAEPFSIR 355 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDEL 427 DW+ + G++F++ NA+ A+++ ++S +A L+ E+R+ ++WFF DE+ Sbjct: 356 DWVVN----DRPGFVFLTGNAEQSAAVRNIVSTVFEVAANALMTTEESRDPKIWFFLDEV 411 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSH 487 PTL+KLP L + L E R+FGG +V G Q ++QLEDIYG+KAA ++ V+N R F +P + Sbjct: 412 PTLNKLPFLPKSLAEIRQFGGAFVVGYQVFSQLEDIYGDKAAETISGVLNNRVVFNTPDY 471 Query: 488 KIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 A+ ++ +GE++ ++ E + GA RDGV ++ +V+ ++IQSLP Y Sbjct: 472 NTAQRSSRSLGEEDVIEQQENITLGAHDTRDGVGIVGRRTQRAIVTPAEIQSLPQFVAYF 531 Query: 548 TLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLS-AVLAAREAEGRQMASLFE 604 P K+ + A +FIP + N E + + L EG + F Sbjct: 532 RPAYDAPTAKVIFEPVPTTATAAKFIPYNGNGFDEGGMRVSALNVEIREGTALVEGFA 589 >UniRef50_A5G187 Type IV secretory pathway VirD4 components-like protein n=3 Tax=Alphaproteobacteria RepID=A5G187_ACICJ Length = 616 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 136/563 (24%), Positives = 243/563 (43%), Gaps = 10/563 (1%) Query: 46 WIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCS 105 ++ S V Y + + P I++ G+++R + + + Sbjct: 45 YLMTSPTQAVQVVDYMAADVAANLMKFVPINPEMTIEWRGRSYRTGVKEWAAFPPLRDQT 104 Query: 106 EQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKK 165 + L + ++ + RQ + + V G +L ++AR+ Sbjct: 105 FDALENLAAGGAIGLAAGWVGLWLSAGRRRRQMEAILADRVVRGTKLV-TEAELARLNAN 163 Query: 166 DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF 225 ++ G + + E ++ + GT G GK+ V+R+ + RG+ ++YD SGEF Sbjct: 164 HATKPLLKFGSVTLPSQLENRHIAIIGTTGVGKTTVLRQQLDVIEARGEAALVYDTSGEF 223 Query: 226 VKSYYDPSI-DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED-PFWQGSGR 283 + +YY+P+ D ILNP D R W + E + D D + LI ED W + R Sbjct: 224 LANYYNPARGDIILNPFDQRGVFWSPFAEIIHPADCDRISRYLITETGDEDKDIWLETSR 283 Query: 284 TIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAV 343 + A + + + L++ L ++ ++L +L N+ +A E+ E+ S+ + Sbjct: 284 NLVANMIRNLWREGRGTLEALLNALQAMPRQELERWLANTSSARTFEKDAERATASVLFM 343 Query: 344 LTNYVKAIRYLQGIEHNGE-PFTIRDWMRGVREDQ-KNGWLFISSNADTHASLKPVISMW 401 L V + +L+ +GE F+I + + + +++ + W+F+ D S+KP++++W Sbjct: 344 LVKAVNMLMFLRKAPRDGELAFSISSFFKHIGQNKGRKPWIFVPRKEDYFESMKPLMALW 403 Query: 402 LSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE 461 L A +L + + +RVWF DEL L ++ +L +LP+ RKFG C V QS Q+ Sbjct: 404 LECAASAMLGLSTSPTQRVWFLLDELADLPRVQNLERLLPQGRKFGACAVLSFQSIGQMR 463 Query: 462 DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVS 521 YG A +L NT+ F + H E+AA IG+ E + + + S Sbjct: 464 ARYGHDGAEALLGCCNTKLFLQMSDHASREWAAANIGKVEVEIPLMTETVDPETGKLQQS 523 Query: 522 TGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR----PKVAPEFIPRDI 577 E + V SD+ LP T Y+ LP P ++ L P +FIP DI Sbjct: 524 FTTARETRPAVIESDL-RLPKHTGYLMLPDGLPVARIKLTNDHIVARGPARQLDFIPADI 582 Query: 578 NPEMENRLSAVLAAREAEGRQMA 600 L A+ AE + Sbjct: 583 AEAFWGVLQEAQKAKTAERLEAP 605 >UniRef50_Q2QCR0 TraJ n=1 Tax=Pseudomonas sp. CT14 RepID=Q2QCR0_9PSED Length = 512 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 143/490 (29%), Positives = 228/490 (46%), Gaps = 26/490 (5%) Query: 94 QVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQ-GKQQSENEVTGGRQL 152 Q D+ + A+V +I I V+ L + ++ G QL Sbjct: 35 QGARDRVFYLAKNTFTLWPLAVALVGGLILAIALCVLIVKLSKTTFAGAHFDKYFRGSQL 94 Query: 153 TDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 +++ R+ K+ K+ I I +P+ +E +F + G G GKS + R + QR Sbjct: 95 VSQ-RELKRLTKE--KEEQITIAGVPVPIAAEATHFSVGGATGTGKSTIFREMMYGCMQR 151 Query: 213 GDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGT 272 D +VI D GEF+ ++Y DKILNP DAR W+ + E + DF+ A ++I + Sbjct: 152 KDRMVILDPDGEFLSTFYRKG-DKILNPYDARTEGWNFYNEIRSHYDFERYAKSIIQVSD 210 Query: 273 KED-PFWQGSGRTIFAEAAYLMRNDP-NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVE 330 D W GR +FAE A + N N ++ E L+ +++ + A +L Sbjct: 211 SNDSEEWNQYGRLLFAEVAKKLYNTTRNPGMREVFRWTNECDSETLQAFVKGTRAVSLFT 270 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 E E+ S+R VL+N + A + F++R W ED G LFI+ + + Sbjct: 271 E-NERATGSVRFVLSNKLPAHFDMPP-----GNFSLRQWC----EDPNGGNLFITWDENM 320 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 +L+P+IS W+ +L M N RR+W F DEL +L +LP L ++L RK GGC Sbjct: 321 REALRPLISCWVDTIFTSILGMKSNPKRRIWTFLDELESLQRLPTLGDMLTRGRKKGGCV 380 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP--SHKIAEFAAGEIGEKEHLKASEQ 508 V G QSY QLE +YGEK A ++ T AE + + E E L+ E Sbjct: 381 VSGYQSYTQLESVYGEKLAETMLANHRTMVALAVGRMGTATAERMSKALSEHEVLRTKEG 440 Query: 509 YS--YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY--QT 564 S +G R S +D++ + +V S+I +L +L +++ PG P ++++ T Sbjct: 441 RSSRWGDWGTR---SENEDVKPERIVMSSEIMALNNLEGFLSFPGSIPIARVTIDPINFT 497 Query: 565 RPKVAPEFIP 574 R P +P Sbjct: 498 RTNPVPGIVP 507 >UniRef50_Q32X91 Probable TrwB n=1 Tax=Xanthomonas axonopodis pv. glycines RepID=Q32X91_9XANT Length = 510 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 121/462 (26%), Positives = 203/462 (43%), Gaps = 16/462 (3%) Query: 112 FVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD 171 V + + + F+ + V G ++ K + G+ Sbjct: 57 LVFSGLGISYGTALLVFLYLKAQSDPAAAAAAGNVLRGSRVEAGGKG------RKGQAGA 110 Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 I I + I R E Q+F GT G GK++ I + R RG VI D G F + Sbjct: 111 IEIAGVEIPRQLEAQHFLFTGTTGTGKTQAINSMLRTIRSRGQRAVIADPGGGFYSRFGR 170 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 D + NP D R W + + D + A ++P G + W ++ A Sbjct: 171 TG-DVLFNPFDGRTVDWSPFADIENDYDCERIAKAIVPDGVGDGMQWHHYSQSFVAAVLR 229 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 M RS +L+ L + + ++L L +PAA L + E+ S RA+L++YV Sbjct: 230 SMHAKGERSIKRLLYWLTTAEPKELADMLAGTPAAALCAKGNERMLASTRAILSSYVGVF 289 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 YL + F++R+W R + GWLF++ D L+ +++ L +AI L+ Sbjct: 290 PYLA----DEGTFSVREWTRNAMGE---GWLFVTYRDDQMGMLRGLVATMLELAIVEGLS 342 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 + E+++R +WF DE+ +L K+ L L + RK+GG + G+Q+ AQL YG A + Sbjct: 343 LSEDQDRGLWFVMDEVDSLGKVTSLRAGLTKLRKYGGRCILGLQTVAQLRTTYGRDEAQT 402 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP-VRDGVSTGKDMERQT 530 L +T+ R+ + A E+G++E + + S + S + RQ+ Sbjct: 403 LLANCSTKLVLRAGDAETARTMEDELGQQEIERTTLSDSTSKGEFFKGSTSASQQYTRQS 462 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 V S+I L DL Y+ +PG +++L Y P+V P F Sbjct: 463 AVMASEIMGLLDLHGYLKMPGET-IHRVALDYVGMPEVQPTF 503 >UniRef50_B9MIL1 Putative type IV secretory pathway VirD4 component n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MIL1_DIAST Length = 571 Score = 401 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 122/520 (23%), Positives = 226/520 (43%), Gaps = 22/520 (4%) Query: 110 SAFVLAAVVALVICLITFFVVS-WILGRQGK---------QQSENEVTGGRQLTDNPKDV 159 +LAA V L + + G GK + E G +L + + + Sbjct: 57 GKLLLAAAVGLGLFFYAPINIFNKFRGGLGKIGISFGETSGSAGGEYIRGAKLVNG-QQL 115 Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIY 219 ++LKK+ + +G I E ++F L G+ G GKS I + + RGD V I Sbjct: 116 QKILKKE--SGSLTVGGQKIPERLEARHFMLAGSTGVGKSVAISEMLDGIAARGDRVFIA 173 Query: 220 DRSGEFVKSYYDPSI-DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFW 278 D G F+K+YYD D ILNPLD+R +W E D D A +++P G W Sbjct: 174 DAGGNFLKNYYDEERGDIILNPLDSRAVSWSPLAEMEGPWDADLIAKSIVPDGDGGSKEW 233 Query: 279 QGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAI 338 + I + + + + + IE+LR +PA LV E EK Sbjct: 234 NQYAQVITSAVLKHCWQ-NDLTNFDIFRLAIIANIEELRMVFEGTPAQPLVAEGNEKMFG 292 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 SIR ++ Y+ +YL F+++ + ++ WLF + +++ P+I Sbjct: 293 SIRGIVGTYISPFQYLDPAAGANNGFSLKSIVE---DNGAKNWLFFNYPDKQISTVAPII 349 Query: 399 SMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 + I + +L++ + NR+ W DE ++ ++ +++ L +ARK GG + G+Q+ + Sbjct: 350 AAMTDIVSKSILSLEADNNRKFWLIIDEFASVGRISSILDFLTKARKNGGRAIIGVQTIS 409 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRD 518 QL+ YG A++L ++++ FR P A+ + +G+++ + + + ++ Sbjct: 410 QLKSAYGVNDASTLMSCLSSQIVFRVPDPDTADIMSRLLGDQQISRVIQSGGESSQSMQI 469 Query: 519 GVSTGK----DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 G S + + +V +I + PDL + G PA + +++ R KVA F Sbjct: 470 GGSKSENWSQQITTDRIVMTGEIMNFPDLYGILNFAGDIPAAPIEVEWMERHKVAEHFQA 529 Query: 575 RDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGE 614 + ++ + ++ + D+P V S + Sbjct: 530 TTRKEIKIAAPAKPAEIQKPTETENTAVSDSDLPGVESDD 569 >UniRef50_B5YII5 Putative conjugative transfer protein TraD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YII5_THEYD Length = 570 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 129/537 (24%), Positives = 235/537 (43%), Gaps = 29/537 (5%) Query: 77 PVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC--LITFFVVSWIL 134 P + + QV Y+ + L F + L+ + + ++ Sbjct: 43 PAVYMILFQPKLLGTVIQVFTGFYVQLWPKALEVLFKKGFWIFLLATPVWLLYPILLTKF 102 Query: 135 GRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTV 194 + K ++E G+++ + + ++ + + + IG +PI + E +F + G Sbjct: 103 KLKAKAIVKDEHMRGQRIVEPSELISLIRRDHPQIGIFHIGRIPIPKQYETTHFFVVGKS 162 Query: 195 GAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKEC 254 G+GK+ ++ ++ RQ+ VIYD G+++ +Y+P D I NPLD+R W+++ E Sbjct: 163 GSGKTTMLNQVIEKIRQKKHKAVIYDTKGDYIAKFYNPEKDLIFNPLDSRTLHWNIFDEL 222 Query: 255 LTQPDFDNTANTLIPM--GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIK 312 D ++ A +LIP ED ++ R +F Y + R+ S L T+ + Sbjct: 223 YLVSDIESFAYSLIPPVPSGHEDEYFITGAREVFYSILYYLYATNQRTMSALWQTVSQGE 282 Query: 313 ---IEKLRTYLRNSP------AANLVE--EKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 IE L+T + + L+E EK K+A I + + Y +Y +EH+ Sbjct: 283 AGVIETLKTAVNHYKLDDCKRGLGLLEGYEKGVKSASDIISTMKKYSNCFKY---VEHHQ 339 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 F I+DW+ Q +G+LF+ + LKP+ S+ L L + ++R RR++ Sbjct: 340 SSFKIQDWLT----KQDSGFLFLVNYDKIKNVLKPLASVLLEQLGNAALTLPDDRERRLF 395 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 F DE +L ++P V+ L R G Q Q+E YG + ++ + T Sbjct: 396 FVLDEFASLQRMPKFVDFLERGRSKGISLWIATQDINQIEKEYGNRTMNTIINNCTTTVA 455 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 F +E+ + +G++E L+ E S G +RDG+S + + L+ S+ LP Sbjct: 456 FAVQDVNTSEYLSKFLGDREILETDESLSMGPADLRDGLSLTRRRKTDRLILPSEFALLP 515 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQ 598 Y+ + G YP K + + P P +IP ENR + ++E Q Sbjct: 516 VFHFYIKI-GEYPISKSRIDLKIYPDTQPSYIPD------ENRFRIATVSEQSEQAQ 565 >UniRef50_B8GZQ6 Bacterial conjugation protein, ATP binding domain trwB n=1 Tax=Caulobacter crescentus NA1000 RepID=B8GZQ6_CAUCN Length = 605 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 130/597 (21%), Positives = 263/597 (44%), Gaps = 17/597 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS + +++++G + + + S ++ Y L G + Sbjct: 1 MSSHHQNLSRGQALFAGALG--SIVSRWRAYILTCLATATCGAYAGFSQLPLSTQRAAQD 58 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + L + S E ++A ++ + +E+ A +V + Sbjct: 59 YAHAKLMLELLVSVSDTTVERYTPTGPEPVSAQGLVSHAFYQAAAERGLDALQWGGLVGV 118 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 + + + ++++ R G+ +E+ G + + +AR+ +K IR+ +P+ Sbjct: 119 LFGVTLCAIWAYLVIRWGETAAEDNARRGASVV-TERTLARLTRKRAGPDAIRLASIPLP 177 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI-DKILN 239 E ++ L GT G+GK+ +R++ + +RGD ++YD SGEF+ YY P D ILN Sbjct: 178 TTLETRHIALIGTTGSGKTTTLRQMLDAIDKRGDTAIVYDTSGEFISHYYRPERGDIILN 237 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYLMRNDPN 298 DAR A W + E D D+ A L+ E W + R + A+ + + Sbjct: 238 AFDARGAFWSPFDEIHHPADADHIARQLVASTGAAEQDIWLDAARILVADVLRKLHAEGR 297 Query: 299 RSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 S L++TL + ++L+ +L ++ +A + E+ E+ + S+ +L V+ ++YL+ Sbjct: 298 TDLSTLIETLGRLSRDQLKDWLADTSSARMFEQGAERASGSVLFMLARCVQLLQYLRASP 357 Query: 359 HNGEPFTIRDWMRGV-REDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 + F+ R + + + W+F+ A+++P+++ +L A +L + + + Sbjct: 358 EDATVFSFRAHFEALDQRTGERPWIFVPRQEQYFAAMRPLLACFLECAATAILGLSPHPS 417 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RR+W DEL L K+ +L +LP RKFG V Q+ Q+ + YG+ A +L N Sbjct: 418 RRIWLMLDELADLPKVDNLARLLPLGRKFGASVVVTFQALGQMRERYGKDGAEALLANTN 477 Query: 478 TRAFFRSPSHKIAEFAAGEIG--EKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 T+ F + ++A+ +G E E ASE + R + + + + L+ S Sbjct: 478 TKLFLQLADPDTRQWASQAVGTVETEIRGASENLDHQVGKGRTSIGSSRQI--LPLLLES 535 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKY-----QTRPKVAPEFIPRDINPEMENRLSA 587 LP Y+ LP +P +++++ + R K F+ D++ + + Sbjct: 536 QF-RLPPFHGYLQLPDAFPVARVTIRNDHIIARGRAKQQ-AFVAIDLDKTLWGAARS 590 >UniRef50_Q04230 TrwB n=5 Tax=Proteobacteria RepID=Q04230_ECOLX Length = 507 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 136/505 (26%), Positives = 224/505 (44%), Gaps = 33/505 (6%) Query: 88 FRMNAAQ---VLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVS-WILGRQGKQQSE 143 F + A Q VL ++ E + ++ + + V+ W+L G+ + Sbjct: 21 FWITAVQKTEVLGSPKLLALWELMKLTPQKPILLLSALGGLAVGVLFVWLLNSVGQGEFG 80 Query: 144 ----NEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS 199 G ++ K + RM ++ K + + +P+ RD+E ++ ++G G GKS Sbjct: 81 GAPFKRFLRGTRIVSGGK-LKRMTREKAKQ--VTVAGVPMPRDAEPRHLLVNGATGTGKS 137 Query: 200 EVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPD 259 ++R LA RGD +VI D +G+ + + D ILNP D R W + E D Sbjct: 138 VLLRELAYTGLLRGDRMVIVDPNGDMLSKFGR-DKDIILNPYDQRTKGWSFFNEIRNDYD 196 Query: 260 FDNTANTLIPMGTKED-PFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRT 318 + A +++P G ++ W GR + E A + S +L + LR Sbjct: 197 WQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRG 256 Query: 319 YLRNSPAANLV--EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED 376 +L + A +L + K S R VL++ + + F+IR W+ ED Sbjct: 257 FLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPD-----GDFSIRSWL----ED 307 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDL 436 G LFI+ D +L+P+IS W+ + +L++ E RR+W F DEL +L KL L Sbjct: 308 PNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASL 367 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS--PSHKIAEFAA 494 + L + RK G V G+QS +QL+D+YG K A +L + K E + Sbjct: 368 ADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMS 427 Query: 495 GEIGEKEHLKASEQYSYGADPVRDGVSTGKDME--RQTLVSYSDIQSLPDLTCYVTLPGP 552 +GE E + + G STG+ +E R+ +V ++I +LPDLT YV G Sbjct: 428 LSLGEHEVERDRYSKNTGKH-----HSTGRALERVRERVVMPAEIANLPDLTAYVGFAGN 482 Query: 553 YPAVKLSLKYQTRPKVAPEFIPRDI 577 P K+ L+ + P F+ I Sbjct: 483 RPIAKVPLEIKQFANRQPAFVEGTI 507 >UniRef50_C7HYW0 Putative type IV secretory pathway VirD4 component n=1 Tax=Thiomonas intermedia K12 RepID=C7HYW0_THIIN Length = 535 Score = 391 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 124/488 (25%), Positives = 210/488 (43%), Gaps = 17/488 (3%) Query: 95 VLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTD 154 +L M + +L+A V + + +S G G + Sbjct: 23 ILVAGLMAVGVSGFFLKPILSAAVFVPFAYFAYKYLSKNFGAGTGSGKNINHLRGAAMVG 82 Query: 155 NPKDVARMLKKDGK--DSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 + ++ + GK D+ I + I R+ E + F G G GKS I + + QR Sbjct: 83 GAELDNLVIARYGKRQTGDLHIAGIRIPREFETRGFMFAGAPGTGKSVAITSMLDIIYQR 142 Query: 213 GDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGT 272 GD I DRSG + YY+P D ILNP+DAR W E ++ D + A ++IP Sbjct: 143 GDAAFIADRSGIYAARYYNPQRDIILNPIDARAHEWSPLAEMRSEYDSETIAKSIIPDAP 202 Query: 273 KEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK 332 + W +TI A L + S + + +L+ L + L+ + Sbjct: 203 GDAAEWNHYAQTILAGIL-LHAWRAGLNNSAITRLAQRADMAELKEILADHAGIGLL--Q 259 Query: 333 IEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 EK SIR +L Y + R L +G F++ W+ +Q + F +D Sbjct: 260 NEKMFGSIRGILATYTIGLARLLPQAGRDG--FSLSAWV----HEQPAAFAFFPYLSDQM 313 Query: 392 ASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 ++ +I+ + +L + + NRR+W DE +L ++ + L ARK GGC + Sbjct: 314 KPMRGIIAALADVYADAVLTLPPDANRRLWLVLDEFASLGRVDSMENFLTNARKHGGCSI 373 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 G+Q+ +Q+ +YG A S+ ++TR R+P + AE+ + +G+K+ ++ S Sbjct: 374 LGMQALSQVHSLYGRDNATSMLSSISTRLTLRAPDAETAEYLSRGLGDKQVVRTMRSGSR 433 Query: 512 GADPVRDGV--STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPA--VKLSLKYQTRPK 567 + S + + + LV ++I PDL Y+ + G P ++LSL Q RP Sbjct: 434 SSSKQGGSNTESWNQQIATERLVLPAEIMRTPDLVGYLQIAGDLPVGHIRLSLPPQ-RPD 492 Query: 568 VAPEFIPR 575 A F PR Sbjct: 493 AAHAFTPR 500 >UniRef50_B9BFK1 TrwB protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFK1_9BURK Length = 529 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 121/511 (23%), Positives = 208/511 (40%), Gaps = 34/511 (6%) Query: 85 GKTFRMNAAQVLHDKYMIWCSEQLWSAFV--LAAVVALVICLITFFVVSWILGRQG---K 139 G M + + + + SAF LA AL + +V R + Sbjct: 21 GAFASMALSGHVPLPFPAGTVRAVRSAFHEPLALWGALPGTCLAAYVAHVCRERLFDGFE 80 Query: 140 QQSENEVTGGRQLTDN----------PKDVARMLKKDGKDS--DIRIGDLPIIRDSEIQN 187 G ++ + K R+ K+ G + +++ + + D E QN Sbjct: 81 GARYARFIRGTRMLNRYQLDAKIRAHNKRYQRVAKQRGDEPRPPVKVCGVEMPTDLETQN 140 Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAA 247 + G G GKS+ I+ L A RGD +V D +G ++ P D I+NP D RC Sbjct: 141 IMIVGAPGTGKSQAIQGLIASALDRGDRMVTVDPNGSLCARFFLPG-DIIINPYDRRCVG 199 Query: 248 WDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVD 306 W L+ E DFD +++ IP + W G R++ ++ + ND LVD Sbjct: 200 WSLFNEAGHDFDFDRLSHSSIPPQVDAQAEEWAGYARSLLSDTMTRLHNDDMPDMRVLVD 259 Query: 307 TLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI 366 + E L +L + +A + E+ SI L Y++ + + F+I Sbjct: 260 LTTRERREVLSKFLEQTGSAGFFAKDAERATASIIFTLNKYIRPLIKIPD-----GDFSI 314 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDE 426 R WMR D+ G ++I+ D +L P I +WL + +L+ + +RR+W DE Sbjct: 315 RKWMR----DESAGNIWITWREDQRTALGPTIPIWLDLVFAMILSDAPSFSRRLWVNMDE 370 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPS 486 L ++ +L + + RK G C V G+Q QL G A ++ + + Sbjct: 371 LASIGRLYSFEPAVSKGRKHGLCVVGGLQDVVQLRMNLGHDPADAVLACFRSMLALGGAN 430 Query: 487 HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM--ERQTLVSYSDIQSLPDLT 544 + A +G + E++ G + ++T + + LV+ S + +LPDL Sbjct: 431 AVTTKTLAAMLGSHDV----ERHPIGVNQQWWNLNTRERKIDRDEPLVTPSQLANLPDLQ 486 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 Y+ +P K+ + P PEF+P Sbjct: 487 GYLKYGKDWPLTKVKFTARDYPVRHPEFVPT 517 >UniRef50_B2TH73 Type IV secretion system protein VirD4 n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH73_BURPP Length = 562 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 129/467 (27%), Positives = 207/467 (44%), Gaps = 15/467 (3%) Query: 111 AFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS 170 A + VA L+ V+ + G ++ + + + + + Sbjct: 56 AIWVPTAVAFSYGLLVMGVIFGYFKSGFEGADYVMYLRGARMVGHARL--KDMTRKFFYK 113 Query: 171 DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY 230 +RI +PI E +F + G+ GAGKS VI A R + ++ D +G+F++ +Y Sbjct: 114 HLRIAGVPIPEWLEALHFRVIGSTGAGKSVVISDYIESALARRERMICIDPNGQFMEKFY 173 Query: 231 DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEA 289 D I+NP +AR W ++ E T D + + +LIP E W RTI +E Sbjct: 174 REG-DIIINPFEARTKFWGIFNEIRTPYDVASYSISLIPKSPSTEQEIWNAMARTISSEV 232 Query: 290 AYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVK 349 + LV L E+L L ++ A + E+T S+RAVLT Y+ Sbjct: 233 MLKLWRLGIGDTDHLVYWLTIASNEQLMEMLADTAARGMF-HGAEETIGSVRAVLTRYIT 291 Query: 350 AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL 409 +YL IE F++R+W+ EDQ N W+ D ASLKP+IS +A Sbjct: 292 PHKYLSDIETVEGYFSLREWIDSNAEDQPNVWII--WREDQLASLKPLISCMFDVACNAA 349 Query: 410 LAMG-ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 L+ + DE+ +L KL LV + RK G+QS AQL+ G+ Sbjct: 350 LSKPITDETVATHLVVDEVDSLEKLNYLVPAATKGRKHRLHICAGMQSDAQLDGTNGKDD 409 Query: 469 AASLFDVMNTRAFFRSPSHK--IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 A ++ + + T AE + +GE E ++ Q + +D RD S G+++ Sbjct: 410 AMTVRNSLRTTVALGIAEGDTYTAEQLSKGLGEHEVIR---QRTTASDTGRD--SHGQEV 464 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 ++ +V S I LP+LT Y+ L G +P K ++ Y+ R V FI Sbjct: 465 IKERVVIPSQITGLPNLTGYLKLAGDWPICKFTMPYKKRKAVTEAFI 511 >UniRef50_C6DZ92 Sigma 54 interacting domain protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ92_GEOSM Length = 672 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 116/602 (19%), Positives = 234/602 (38%), Gaps = 42/602 (6%) Query: 60 YWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVA 119 + W L + + P + I + Y+ + L + V+ Sbjct: 76 FLWKYPLAHLARSFRLDPTFHIYAPRRLAGWPHD---AQGYVAMRAHDLVQNVLYGEVLK 132 Query: 120 LVICLITFFVVSW---------ILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS 170 + F +SW + R + + E G +L + + Sbjct: 133 AYRFPLAFSFLSWVCVWPMAIRYVRRVTARIKDQEHIRGARLITE----KEIHSESDGTG 188 Query: 171 DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY 230 + + + I D ++ + G G+GKS V+ + + + D GE V+ +Y Sbjct: 189 ILPVASIRIPEDLSRRHILIAGQTGSGKSTVLIQHLAAIQNATRRAIANDFKGELVERFY 248 Query: 231 DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAA 290 P D ILNP+DAR W L+ E ++PD +LIP ED FW + + + Sbjct: 249 RPEKDLILNPIDARGVGWTLFNELKSKPDLTAVTGSLIPPAKGEDRFWSAAAQDVLRGVM 308 Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN----LVEEKIEKTAISIRAVLTN 346 R+ ++L L S K+ ++ + + + + +++ K A + AVL + Sbjct: 309 AYCYETNKRTNAELWKALTS-KLHEITEMCQATESGHAGYTYIQDASSKQAAGVIAVLMS 367 Query: 347 YVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI 406 YV + + PF++R W E+ + +FI++ + ++P +S++ +A Sbjct: 368 YVSWLEF-----AFDGPFSLRRW----AEEAGDKMVFITNTDEVANIMRPYLSLFADLAG 418 Query: 407 RGLLAMGEN--RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY 464 + L + E+ + ++ DEL + +LP + +L R G GI + +E +Y Sbjct: 419 KRFLTLPESTEPEKNIYLILDELGNMQRLPSVKRLLTAGRSKGIVVEVGIPDFTSIESVY 478 Query: 465 GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGK 524 G + A ++ + ++ + A F + E+E ++S YS R G + + Sbjct: 479 GREDAHTIINSCGSKLILNLGDPEAARFFSDLASEEECWESSTYYSISEHDHRGGENHNR 538 Query: 525 DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT---RPKVAPEFI--PRDINP 579 + + ++ ++I L + Y LPG P ++ + + P V FI P Sbjct: 539 QVRTRKVIMPAEIMRLAVGSGYFMLPGGNP-AQVEIPWSEANKLPVVHKPFILRPGLSLD 597 Query: 580 EMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGV 639 E+E + V + + + P+ +V + +P V +D++ S Sbjct: 598 ELEAKDQEVSIMAQK----VLNGPAPEELKVQVAHNAASGVRPPLNVEETSSDREQISVR 653 Query: 640 NV 641 Sbjct: 654 PE 655 >UniRef50_Q3SHV9 Putative type IV secretory pathway VirD4 component n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHV9_THIDA Length = 565 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 108/470 (22%), Positives = 194/470 (41%), Gaps = 20/470 (4%) Query: 102 IWCSEQLWSAFVLAAVVALVICLITFFVVSW--ILGRQGKQQSENEVTGGRQLTDNPKDV 159 ++ ++ LAA ++ +W R G + + G+QL ++ Sbjct: 52 LYVYQRAPGMLGLAAFGGAFGLGWIAWMFAWRPGAARPGDADDDADNLRGQQLV-TVAEI 110 Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIY 219 + ++ + + IG +PI E F L G+ G GKS+ ++ + + G VI Sbjct: 111 KKQIRSAKTKTRLEIGGVPIPIYVEDGGFLLTGSPGTGKSQATTKMLDTLQAGGHRAVIA 170 Query: 220 DRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQ 279 D G F Y + NPLD R +W E + D A +LIP G + W Sbjct: 171 DAEGIFYSR-YAGDGAVLFNPLDRRSVSWSPLAELKSPQDCSALAKSLIPDGHGAEASWN 229 Query: 280 GSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAIS 339 + +T+ ++ ++L IE+L+ L + A +V + Sbjct: 230 DAAQTVLEGLLRRCWETS-KTNAELYRLACVADIEELQQLLAGTAAMTVV--GNARYFGE 286 Query: 340 IRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 +R L Y++ +L F++RD++ ++ GWLFIS + A+L P+I Sbjct: 287 VRPGLGRYLRCFEHLDPAAGRA-SFSVRDFI-----TEETGWLFISYTQEQRAALLPLIQ 340 Query: 400 MWLSIAIRGLLAMGENRN-----RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 L +A R +L++ RR W DELP L ++ L+ +L K G + Sbjct: 341 CTLDVASRAILSLPHTTGDRSKLRRTWLVLDELPLLGRIMSLIPLLTNGSKHGAAVIATA 400 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD 514 Q+ A + YG A ++ + T R + AE+ + +G++E + S G + Sbjct: 401 QTIALFREAYGHDATQTILATLGTWLTLRVSDAETAEYMSKSLGDEEVRRVV--ASGGKN 458 Query: 515 PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 + + + +V S +Q+LP L Y+ + GP P ++L Y Sbjct: 459 DSGKSDNWSEQHSTRRVVMPSQLQNLPRLHGYLNISGPLPVCAVTLPYAD 508 >UniRef50_Q7X127 TrwB n=8 Tax=Gammaproteobacteria RepID=Q7X127_XANCI Length = 524 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 118/481 (24%), Positives = 202/481 (41%), Gaps = 29/481 (6%) Query: 112 FVLAAVVALVICLITFFVVSWILGRQG-KQQSENEVTGGRQLTDNPKDVARML------- 163 F++ VVA + T + G G + G Q+ + +++ Sbjct: 52 FMVGGVVAGLGLAATTGYLFHEYGDDGFRGAPYRRWMRGSQMANWHSVKSKVNAANRREN 111 Query: 164 -------KKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV 216 + I IG +P+ E +N + ++GAGKS + + + A +R D + Sbjct: 112 RRRRAEQRGAKDLPPIMIGPMPMPLHLENRNTLICASIGAGKSVALESMISSAVKRRDKM 171 Query: 217 VIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-ED 275 + D +G F + P D ILNP D R + W L+ E DFD A ++IP D Sbjct: 172 AVIDPNGTFYSKFSFPG-DTILNPFDRRSSGWTLFNEIKGVHDFDRMAKSVIPPQIDPSD 230 Query: 276 PFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEK 335 W R + A+ + N LV+ L+ E +R +L N+ + E EK Sbjct: 231 EQWCAYARDVLADTMRKLVETNNPDQDTLVNLLVREDGEVIRAFLANTDSQGYFRENAEK 290 Query: 336 TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 SI+ ++ YV+ +R++ F++ W+ D G LFI+ D A+ + Sbjct: 291 AIASIQFMMNKYVRPLRFM-----TKGDFSLHKWV----HDPNAGNLFITWREDMRAAQR 341 Query: 396 PVISMWLSIAIRGLLAMGENR---NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 P+++ W+ +L++ ++ +RR+W F DEL +L KL V + RK G Sbjct: 342 PLVATWIDTICATILSISDDAQHLSRRLWLFLDELESLGKLESFVPAATKGRKHGLRMAA 401 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 IQ +AQL++ YG+ AA +L F + + A+ A+ +G++ + + G Sbjct: 402 SIQDWAQLDETYGKDAAKTLLGCFRNYLIFGASNALNADKASEILGKQHVERIQITTNAG 461 Query: 513 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 + +V S+I +L DL YV +P K+ L Y P A Sbjct: 462 GSGGGGRSRHVVASPPEPVVLDSEISNLKDLGGYVMFAEDFPIAKIKLPYVKYPHRAAAI 521 Query: 573 I 573 Sbjct: 522 D 522 >UniRef50_A9I2I0 Type IV secretion system protein VirD4 n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2I0_BORPD Length = 548 Score = 367 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 126/503 (25%), Positives = 211/503 (41%), Gaps = 47/503 (9%) Query: 103 WCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQ--GKQQSE--------NEVTGGRQL 152 W ++ W +L ++ + +V + G+ G + Sbjct: 41 WNAQTFWHFMILTPQYPVLYGALGIGLVLALALILLIGRTTRTEGFEGAAYKRFVRGTR- 99 Query: 153 TDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIR--------- 203 T + K +A ++ GK I +G +P+ +E + + G G+GKS ++R Sbjct: 100 TTSAKSLALQCEESGKQ-QIDVGGIPMPTANENLHLLITGATGSGKSVLLRNMAASVLRR 158 Query: 204 -------RLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLT 256 RL +R D +++ D +G+ + ++ P+ D ILNP DAR W + E Sbjct: 159 SRHTMNNRLLGQMPERNDRMIVIDPNGDLLSKFWQPN-DVILNPYDARSQGWSFFNEVRA 217 Query: 257 QPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKI 313 D+ A++++PM K W GR + E A + S L Sbjct: 218 DYDWKRLAHSMVPMSQDKNAEEWNDFGRLLLRETAKKLHQLQGNEASIMDLFRLCTIEDP 277 Query: 314 EKLRTYLRNSPAANLV--EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR 371 + L+ +L + A +L + K S R VL+N + + F+IRDW+ Sbjct: 278 KVLKQFLEGTLAESLFVGSSEASKALSSARFVLSNKLS-----EHTGMKPGRFSIRDWLS 332 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLH 431 G L+I+ D +S+KP++S W + I +L+M E+ + R W F DEL +L Sbjct: 333 ----KPNGGNLYINWREDMMSSMKPLVSSWADVFITSILSMPESTHLRWWLFIDELASLE 388 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS--PSHKI 489 LP L L + RK G V G+QS +QLE IYG A ++ A + Sbjct: 389 ALPSLEAGLTKGRKSGLRVVAGLQSTSQLEHIYGRTMATTIRASFRNLAVLGGSRTDPQT 448 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTL 549 A+ + +G+ E + YS S D + +V+ + IQ+LP L YV L Sbjct: 449 AKDMSESLGKHEVERPK--YSISRSVDHRNTSDNMDRTTEDVVTAAQIQALPPLGGYVAL 506 Query: 550 PGPYPAVKLSLKYQTRPKVAPEF 572 G +P ++SL ++ A F Sbjct: 507 AGDFPIARVSLPFRQFGSSAIAF 529 >UniRef50_C1F5K1 Conserved domain protein n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5K1_ACIC5 Length = 666 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 139/523 (26%), Positives = 226/523 (43%), Gaps = 36/523 (6%) Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDG---KDSDIRIG 175 A + ++ F V+ + RQ + + G +LT P+ R +K DG K D++ Sbjct: 161 AGLFLILLPFAVTLDVKRQKALKYGRRLKGPERLT--PQAFNRAVKGDGIGFKTDDMK-E 217 Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI- 234 + I +E Q+ + G GAGKS ++ ++ R R D ++YD + EFVK +YDPS Sbjct: 218 MIRIPAKAEAQHMQIIGDTGAGKSAMLFQVLRQVRGREDSAIVYDPAREFVKRFYDPSRG 277 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLM 293 D ILNP D RC W L +E ++ + A +L P ++ F+ S + IFA Sbjct: 278 DVILNPFDKRCPYWGLAEELRSRSEAKALAASLFQPPQDRKGEFFIESPQKIFAFLMAY- 336 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 + +LV + +++ L+ + A+L++ + + + L ++R Sbjct: 337 ----GPTPDELVQWM--SNPDEIDRRLKGTEHAHLIDPRAHQQRAGVLGSLALVADSLRL 390 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 L +T +W +++ GW+FI+S +L+P+ S+W+ + LL Sbjct: 391 LPKKGEGNGRWTATEWA-----EKRQGWIFITSLPAEREALRPLQSLWIDWLVLRLLNEP 445 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 +RVWF DEL +L KLP L + E+RK V G Q AQLE +YG A + Sbjct: 446 TKEQKRVWFVIDELASLQKLPQLHTAITESRKSRNPVVLGFQGKAQLEYLYGH-LAEVML 504 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 T + + E+ + IG+ E + E + D R G + + + + LV Sbjct: 505 SQPATSVWLTTKEPNAGEWVSKFIGKVEIERLRETHF---DGTRSGHNFTIERQVEPLVL 561 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF---------IPRDINPEMENR 584 S+I LPDL ++ S Y P+VA F +P D E R Sbjct: 562 ESEISGLPDLHAFMKYQNY--VTYFSFPYFDMPEVAKPFELRERTDDKLPYDPTALREGR 619 Query: 585 LSAVLAAREAEGRQMASLFEPDVPEVVSGE-DVTQAEQPQQPV 626 A L EP E + E A+Q +Q V Sbjct: 620 PQAELKQEPEAPVPAPEPNEPVASEAIQPELSAAPADQEEQNV 662 >UniRef50_A5FU76 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FU76_ACICJ Length = 604 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 133/601 (22%), Positives = 242/601 (40%), Gaps = 55/601 (9%) Query: 16 SMRIRM-FSQIANIMLYCLFIFFWI---LVGLVLWIKISWQTFVNGCIYWWCTTLEGMRD 71 R+ M F+ I +L F F W+ L + + VN + + Sbjct: 12 VYRVAMGFTMIYAALLTFGFWFAWLRAESAYLFILQSSAASIIVNVGLPAIANMARNQVE 71 Query: 72 LIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFV-- 129 + A KY+ W+A+ +VA ++ L+ F+ Sbjct: 72 RRQIFHRALSLVVVLGIVNFAGLYYGSKYLYETGFPGWAAWFTTILVAGMVTLLATFITL 131 Query: 130 --------VSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 + I G + + G ++ P+ +++ + + +G +P+ Sbjct: 132 GAPSIEKQIMEIPPHIGALRPGEKWLRGAKIEAAPQ--GQIIDR----GRLSVGGIPLEW 185 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQR--------GDMVVIYDRSGEFVKSYYDPS 233 D E+Q+ L+G G GK++V R+R V+I D G + + Sbjct: 186 DREVQHTFLNGAAGTGKTQVAEGFLRAIRERALLPYIKKSPRVIILDPGGAYYSRF-GQD 244 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 D +LNP DAR AW + E DF+ A +P+ + W GR A+ M Sbjct: 245 GDVLLNPFDARSVAWSPFAEIKRPQDFNRVAAAFVPLAEGPNKEWSEFGRKTMADTMRAM 304 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 + +S +L LL E L YL N+ L E+ K + +A + ++ +Y Sbjct: 305 VRNDEKSPQELF-RLLDGSAENLAFYLNNAEIYGLTGEENMKMFSNAKATIAPNIEIFQY 363 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 L+ F++RDW+R E +GWLFI+ D L+ ++ +AI L++ Sbjct: 364 LKP----DGNFSVRDWLRKGDEANDSGWLFITYRDDQMKLLRQFVAAMADLAILEGLSLP 419 Query: 414 ENR------NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 N +RR+++F DEL ++ + +L + L + RKFGGC V G+Q+ +QL +YG Sbjct: 420 SNEGLPAEEHRRLFYFMDELDSIGAVSELKDALIKLRKFGGCCVLGLQTISQLRAVYGRD 479 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV------- 520 ++ + T R + AE +G+++ + + YS A R G+ Sbjct: 480 TTRAILGNVATNVVLRPQDGETAEEMEKLLGDQDIERETVTYSQSAGNSRSGMFGNGHSN 539 Query: 521 -------STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 + + + + V S++Q++ +L + P P +L Y P++ F+ Sbjct: 540 TSTGRTANQQRQIVTRKCVLASELQNMENLHGILMRPAS-PHHPFTLDYVEMPRINAPFV 598 Query: 574 P 574 Sbjct: 599 E 599 >UniRef50_C1F4S3 Conserved domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4S3_ACIC5 Length = 674 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 127/540 (23%), Positives = 227/540 (42%), Gaps = 47/540 (8%) Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTD----NPKDVARMLKKDGKDSDIRIGD 176 +I I F++ Q ++ GR+L +P+ R+++ DG ++ Sbjct: 155 IISGILVFILPLPYWIGRDIQRRKQIKYGRRLRGPILVSPRTFNRLVRGDGVGFNVSSRG 214 Query: 177 LP--IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY-DPS 233 P I R +E ++ + G G+GK+ +I +L ++RG ++YD + EF++ +Y + Sbjct: 215 QPLRIPRAAEDRHIEIIGDTGSGKTTLIMQLLRQVQERGHPAIVYDPACEFIQRFYSEKR 274 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIFAEAAY 291 D +LNPLD RC W +E + + + A +L P + F+ + + IFA+ Sbjct: 275 HDIVLNPLDRRCPYWGPSEELVRRSEARTLAASLFQHPDERTKHEFFIETPQKIFAKLLL 334 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 + + +L++ + + ++ ++ + A ++ + + L + Sbjct: 335 DL-----PTPQQLIEWMSNE--AEIDKRVQGTELAAMIHPSAPQQRSGVLGSLNLVADSF 387 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 R L + +T R+W + + GW+FI S A +L+P+ S W+ + + LL Sbjct: 388 RLLPSKDEAKREWTAREWSKH-----RQGWIFIPSQASEREALRPLHSFWIDMLVLRLLT 442 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 VWF DEL TL KLP L + E RK G V G Q AQLE IYG A Sbjct: 443 APSPNQPPVWFVLDELATLQKLPQLHTAITENRKSGNPLVLGFQGKAQLEVIYGH-LAEV 501 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 + TR F ++ + A++ + IG E + E +G G + D + + L Sbjct: 502 MLSQPATRIFLKTGEPEAAQWVSRAIGNVEVERVKETRYHGGGM---GQNFTVDRQIEPL 558 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 V S+I + + Y+ G Y + P P+FI R L + Sbjct: 559 VLDSEISGMEPMRAYLKH-GNY-VARFGFHPVKIPDDKPKFIER---------LHSDYIV 607 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELK 651 R+A+ PD +G+ ++PVSP ++ + G + K Sbjct: 608 RDAK---------PDAQNEPAGQS--NGNHSREPVSPPEVEESNGVQKGARKSGTANKPK 656 >UniRef50_B6AM17 Plasmid coupling TrwB n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AM17_9BACT Length = 425 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 111/430 (25%), Positives = 196/430 (45%), Gaps = 31/430 (7%) Query: 167 GKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGD------MVVIYD 220 K RI + R +E+++ + T G+GKS++I +L N + D +I D Sbjct: 8 KKTIPFRIPGIEFPRGAELEHILIPATTGSGKSQLIHQLLNRVLEGIDTAPDREKALITD 67 Query: 221 RSGEF--VKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP--MGTKEDP 276 +G+F + Y + D++LNP D R W+ + E + D+ A IP G ++ Sbjct: 68 PNGQFAETRGYKN---DRVLNPFDRRSMKWNPFSEIKNEYDYKLLAAAAIPSADGKGDET 124 Query: 277 FWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKT 336 W+ + + A+ + ++ L + E LR YL + + +L+ ++ Sbjct: 125 EWRKYAQDMLADLMKGLHRAEKTDPREVQRLLSMVDPEALRPYLSGTSSESLLSGPNDRY 184 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 S+ VL+N + A +L E +GE F+IR+W+R G LF++ +++P Sbjct: 185 FGSVIGVLSNALAAWEFL---EPDGE-FSIREWVRA-----GKGCLFLTYTDAQIEAMRP 235 Query: 397 VISMWLSIAIRGLLAMGENRN------RRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 ++ WLS+AIR L++ + RRVWF CDEL +L + L + L RK G Sbjct: 236 LLGCWLSLAIRETLSLPIEVDDRGLALRRVWFVCDELDSLGTVHGLSDALSRGRKPGLAV 295 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY- 509 + IQS AQL YG+ +A+L + R + A + +G+ E S + Sbjct: 296 ISAIQSIAQLRTRYGKDGSAALLACYVNKLVMRQGDFEDARHWSDYLGQTEEEWISRTWG 355 Query: 510 --SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 S G + + E + L+ S++Q +P Y + G + ++ PK Sbjct: 356 HSSSGGGHASENQTLAARREIRQLLLPSELQEIPKFCGYARISGLSGIRPFRFEPRSFPK 415 Query: 568 VAPEFIPRDI 577 VA F+P+++ Sbjct: 416 VAEAFLPKEV 425 >UniRef50_B6AM16 Conjugation TrwB n=4 Tax=Leptospirillum sp. Group II RepID=B6AM16_9BACT Length = 647 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 121/504 (24%), Positives = 209/504 (41%), Gaps = 48/504 (9%) Query: 133 ILGRQGKQQSENEVTGGRQLTDN-PKDVARMLKKDGKDSDIRIGDLPIIRDSEI------ 185 + Q E E G +++ P AR + DLP+ ++ Sbjct: 3 WFDKDESQVKEIEHVRGSKISSTRPGKPARKARWYDPADPAT-HDLPVRPENWTGDEGQT 61 Query: 186 ------------------QNFCLHGTVGAGKSEVIRRLANYAR---QRGDMVVIYDRSGE 224 ++ + G G+GK++ I R+ + G+ ++ D G+ Sbjct: 62 LSRELLLEDLELDTEVPTKHMIIGGGTGSGKTQAIHRVLDRVFWGVSNGEKAIVTDSGGQ 121 Query: 225 FVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPF---WQGS 281 F + S D +LNP D R +W+ + E Q D+++ A TL+P + W Sbjct: 122 FFSTRSRKS-DLLLNPFDGRSVSWNPFSEIENQWDYESLAETLVPGKSGPGAMADDWIRY 180 Query: 282 GRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIR 341 R + + + + N + V LL +EKL YL +P L+ ++ S+ Sbjct: 181 ARGLISSIMKGLAEEGNPDPRR-VPELLRGDMEKLAPYLAGTPEEALLNPASDRFLGSVV 239 Query: 342 AVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 V + ++ +YL F+IR W+R D G LFI+ + +K +I W Sbjct: 240 GVASLALRPWQYLSP----DGDFSIRKWIR----DGAGGTLFITYKDAQMSLMKDLIGAW 291 Query: 402 LSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE 461 L IAI +L + + RRVW DEL +L + L RK+G C + IQS AQL+ Sbjct: 292 LGIAITEVLDLSPDFERRVWLVEDELDSLGTVAGLANANTRGRKYGLCSIGAIQSIAQLD 351 Query: 462 DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVS 521 + YG+ +L +++ FR S K +E+ + E+G++E + S + D S Sbjct: 352 EKYGQLGGQTLLSTFSSKIIFREGSWKDSEYWSNELGQREITEQSITKA-STSSRHDNSS 410 Query: 522 TGKDMERQTL---VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI-PRDI 577 T + + + V S++ LPD T Y PG K+ + + + P F+ P + Sbjct: 411 TETVAQTRKVIQTVLPSELAELPDRTAYCRFPGMEGIHKIEFEIRKYKPIRPAFLPPGEP 470 Query: 578 NPEM-ENRLSAVLAAREAEGRQMA 600 P + +L V E ++ Sbjct: 471 EPSFDDPKLEIVEKPVPEEPSRIP 494 >UniRef50_A9ATZ0 Type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ATZ0_BURM1 Length = 675 Score = 348 bits (892), Expect = 5e-94, Method: Composition-based stats. Identities = 120/531 (22%), Positives = 214/531 (40%), Gaps = 30/531 (5%) Query: 70 RDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWS---AFVLAAVVALVICLIT 126 RD + + + + AQ L L AF A V++ + Sbjct: 78 RDGVGEKKILTVVKSDGEL----AQWLTPPQFRNVVPDLARPVTAFRYVAWVSVGLGAAG 133 Query: 127 FFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQ 186 ++ V L R G++ EN+ G + +++++ ++++ + + D+ + R + +Q Sbjct: 134 YYAVWRSLARLGRRARENKRVDGALDVVSAEELSKAVRRE-EAGPYTVLDVALPRSAPMQ 192 Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCA 246 G G GKS I L RG VIYD +GE+ ++YY P D NP Sbjct: 193 GIMFVGAQGTGKSLGIHDLMGQVFARGRKSVIYDHAGEYFRAYYRPGKDLFFNPALLGSV 252 Query: 247 AWDLWKECLTQPDFDNTANTLIPMG----TKEDPFWQGSGRTIFAEAAYLMRNDPNRSYS 302 W ++ E D D A+ +P F++ + R +F+ A +R Sbjct: 253 PWSMFMEMENTYDSDTLAHAFLPPKAGVVHGASAFFEDAARVLFSVMALRLRQRGAVYTR 312 Query: 303 KLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 + + +LS+ ++L ++NS A++ V + + + + Y+ I +Q Sbjct: 313 LISEAILSMPEDELELLIKNSVASSAVGGDSKGQRQGVISSIAIYLNGIAAVQD-----G 367 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR-RVW 421 +T+R++ E + LF+ DT+A P+ + +++A + + A E R+ R W Sbjct: 368 TWTLREFY----EKDDDTRLFLIGTEDTYAMFAPLFRLLITMAFQTIAARREIRHEDRYW 423 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 FF DE L + L E RK+G C GIQ+ Q G A +L + NT Sbjct: 424 FFLDETHVLGDI-KLDARQAELRKYGVCVAAGIQADKQFNTSMGADRAETLMNCFNTTVT 482 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 R + E A +G+ E + RDG +D + +V S I L Sbjct: 483 LRLNEPNMQERMARRLGKSETAVVRAGQAIAVTDWRDGGQLSQDEREKWVVMPSKIGLLK 542 Query: 542 DLTCYVTLPGPYPAVKLSLK------YQTRPKVAPEFIPRDINPEMENRLS 586 + YV + G +P ++ + Y+ P F R +P + R Sbjct: 543 NCMAYVQVAGDFPPALVNYRHWLPRWYRPWP-RTLRFRERQPDPPRDPRFK 592 >UniRef50_A5V2N2 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2N2_SPHWW Length = 578 Score = 345 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 113/454 (24%), Positives = 195/454 (42%), Gaps = 15/454 (3%) Query: 115 AAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI 174 + +A+++ F+ + R G ++ L + + Sbjct: 134 SWPLAVMMPATFAFLGGAVAARLAAPPRRVRHLRGTKMRPAVSAWRGRLWAR-LTGGLTL 192 Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 +P+ R+ E + G G+GKS + L A +RGD ++ D G + +++ Sbjct: 193 AGVPLSREDETMHVAAIGATGSGKSTALHGLMAGALRRGDRHIVADPEGAAMSAFFADG- 251 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAAYLM 293 D +L+P DARCA WDL E + D+ A++L+P +GT + W + + A+ Sbjct: 252 DILLDPFDARCARWDLLAEIESPSDYAFLASSLLPHLGTGDHDQWISYAQRLLADTMENF 311 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 S S V L S +I +L+ + +A EE E+ SI L V +R Sbjct: 312 VTLELGSTSDYVALLGSARIAELKELCAGTSSARYFEEGGERMLASILGTLAPAVAHLRL 371 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 + +GE F++R W+R R G L++ A+ A+++ ++S W++IAI L++ Sbjct: 372 IAMA--SGEVFSLRRWIREGR-----GSLWMPYAANQVAAMRGLVSCWMNIAILETLSLP 424 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 +R+RR+WF DEL L ++ L + RK GGC G QS+AQ++ +YGE AA ++ Sbjct: 425 ASRDRRIWFHIDELDALGRIEGLKDAQARLRKVGGCVAIGFQSFAQVKHVYGE-AAHTIV 483 Query: 474 DVMNTRAFFRS---PSHKIAEFAAGEIGEKEHLKASEQYSYGAD-PVRDGVSTGKDMERQ 529 + R A A IGE+E + S S Sbjct: 484 ENCGNLLILRCGGGGDESTANLANELIGEREAERDDLSRSQSRGRNASQSTSVQSRRSVD 543 Query: 530 TLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 V S+I LP+ +V ++ ++ Sbjct: 544 PAVLASEIMQLPNREGFVKRALDPRWQRVRFPFR 577 >UniRef50_Q17U09 TraJ n=11 Tax=root RepID=Q17U09_ECOLX Length = 509 Score = 335 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 135/523 (25%), Positives = 236/523 (45%), Gaps = 34/523 (6%) Query: 55 VNGCIYWWCTTLE-GMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFV 113 G + + TL M + ++ Y I + + ++ + + +W LWSA + Sbjct: 5 ERGLAFLFAITLPPVMVWFLVAKFTYGIDPSTAKYLIPY--LVKNTFSLW---PLWSALI 59 Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 + + LI F + R K + ++ G +L + +A ++ G + + Sbjct: 60 AGWFIGVG-GLIAFIIYDK--SRVFKGERFKKIYRGTELV-RARTLADKTRERGVN-QLT 114 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 + ++PI +E +F + GT G GK+ + L + RG + D +G F+K++Y P Sbjct: 115 VANIPIPTYAENLHFSIAGTTGTGKTTIFNELLFKSIIRGGKNIALDPNGGFLKNFYRPG 174 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED-PFWQGSGRTIFAEAAYL 292 D ILN D R W + E D++ N+++ W G GR IF+E + Sbjct: 175 -DVILNAYDKRTEGWVFFNEIRRSYDYERLVNSIVQESPDMATEEWFGYGRLIFSEVSKK 233 Query: 293 MRN-DPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 + + + +++ ++ +KL+ +L +PA + EK S R VL+ + Sbjct: 234 LHSLYSTVTMEEVIHWACNVDQKKLKEFLMGTPAEAIFS-GSEKAVGSARFVLSKNLAP- 291 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 +L+ E N F++RDW+ +D K G LFI+ + SL P+IS WL +L Sbjct: 292 -HLKMPEGN---FSLRDWL----DDGKPGTLFITWQEEMKRSLNPLISCWLDSIFSIVLG 343 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 MGE + R+ F DEL +L LP+L + L + RK G C G Q+Y+QL +YG A + Sbjct: 344 MGEKES-RINVFIDELESLQFLPNLNDALTKGRKSGLCVYAGYQTYSQLVKVYGRDMAQT 402 Query: 472 LFDVMNTRAFF---RSPSHKIAEFAAGEIGEKE-HLKASEQYSYGADPVRDGVSTGKDME 527 + M + R + + + +GE E ++ E VR +D++ Sbjct: 403 ILANMRSNIVLGGSRLGD-ETLDQMSRSLGEIEGEVERKESDPQKPWIVR----KRRDVK 457 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 V+ ++I LP+LT Y+ LPG P K K+ + P Sbjct: 458 VVRAVTPTEISMLPNLTGYLALPGDMPVAKFKAKHVKYHRKNP 500 >UniRef50_D1BL71 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL71_VEIPT Length = 638 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 115/591 (19%), Positives = 225/591 (38%), Gaps = 51/591 (8%) Query: 28 IMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYW--WCTTLEGMRDLIKSQPVYEIQYYG 85 + IL+G++L ++ +Y + + + + Y Sbjct: 19 TLAIWKKYLRNILIGVLLLQTLASGGLFYSFLYQSENIISTQNIYVTKEVVLNYINPIKP 78 Query: 86 KTFRMNAAQVLHDKYMIWCSEQ-----------------------LWSAFVLAAVVALVI 122 T++ Q + + L + ++ L++ Sbjct: 79 DTYKTQIGQFIASHTFDFEVNPNNKIPFKNYKDVIDHLTNNQLYTLKENYKKYWLITLLL 138 Query: 123 CLITFFVVSWILGRQGKQQSENE---VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI 179 L + W + K S ++ G QL K ++ K + IG++ I Sbjct: 139 SL--GISLYWNYSQYLKDTSISKKALHKRGMQLLSQ-KQISLYTKNKPHV--LSIGNINI 193 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV------VIYDRSGEFVKSYYDPS 233 D+E ++ + G G+GKS ++ + N +I D EFV + +P Sbjct: 194 PTDTECKHILVFGASGSGKSVLLSQFLNQINTYSQKYNDKRHYIITDVKPEFVGKFAEPD 253 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 D I P D R +W ++ + D+D A+ L +DPFW + IFA+ + Sbjct: 254 -DYIFCPFDKRSISWSIFNDIDDISDYDTFASILFEQEGAKDPFWGLAAGAIFADGLKYL 312 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI----EKTAISIRAVLTNYVK 349 ++ +++ E L + + P + ++ + T SI A L + +K Sbjct: 313 DLQGRKTNRDILE-FFKQSTEYLTEAINSLPPTLITSKQYLNAPDNTFTSILATLASGLK 371 Query: 350 AIRYLQGIEHNGEPFTIRDWMRG--VREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 +L+ N PF+ + ++R R D L++ A+ + P++S+ + I I Sbjct: 372 PFMHLKDSTDNNTPFSFKQYIREEYQRTDGTIPNLYLLVPANRQRIMAPLLSLVMDIMIN 431 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L + E++N R++F DE+ +++K+ L +++ + R +G + Q L + YG + Sbjct: 432 EALTLPESQNCRLYFIIDEIGSVNKIQLLPDLITKGRSYGISILALTQDPGLLREKYGPQ 491 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 S + T+ R A+ A G +E ++ E + S +D Sbjct: 492 VMQSFLNNFGTQIVLRINDATTAKELADNFGVEEIIEYKESIQLPQNGSP-IPSISQDTT 550 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPGPYP--AVKLSLKYQTRPKVAPEFIPRD 576 ++L+ S +QSLP Y + G P V L + P + F P D Sbjct: 551 TKSLILPSQLQSLPPFKGYGKILGFNPFNLVIPQLFFSENPNI-KHFDPID 600 >UniRef50_B6ASB1 Conjugal transfer protein, TraB n=2 Tax=Leptospirillum RepID=B6ASB1_9BACT Length = 701 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 140/645 (21%), Positives = 255/645 (39%), Gaps = 52/645 (8%) Query: 38 WILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLH 97 +L G V+++ +S +++ T L VY + G + A+ L Sbjct: 18 LLLAGAVMFVLVSLGSWIAWMKLTRGITPGLSVPLWIEVTVYLLPP-GHVVSLGPAKSLA 76 Query: 98 --DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 D + W + V + I + R K G QL + Sbjct: 77 EMDPGLAHSLLTTWKVLSAVSFVLVGIAAM----------RLAKGPQPVRHKRGDQLRSD 126 Query: 156 PKDVARMLKKD-GKDSDIRIG-DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRG 213 + + ++ G I + + I E+++F L G+ G+GK+ V+ + ++A RG Sbjct: 127 AGTIRKQIRARYGVTDGIFVHPGIRIPETLEVRSFSLVGSPGSGKTTVLNGMVDHAIARG 186 Query: 214 DMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 D +I+D G+F + + IL+P DAR L + ++ + LIP+ + Sbjct: 187 DRALIFDFKGDFTERIPN-GKKIILSPWDARAVRLALGSDVSSEVQARLLSECLIPINPR 245 Query: 274 E-DPFWQGSGRTIF-AEAAYLMRNDPNR------SYSKLVDTLLSIKIEKLRTYLR--NS 323 + P W + R I AE LM + L D L + ++ ++ N Sbjct: 246 DTQPMWGNASRAILRAELHRLMAERQGAWGFHELGDALLADILCPYSDQVVQNLVKRYNP 305 Query: 324 PAANLVEEKIEKTAISIR----AVLTNYVKAIRYLQGIEHNGEPF-TIRDWMRGVREDQK 378 A+ +V++ KT +S+ A L + + R+ ++ G PF ++R ++ G +++ Sbjct: 306 EASRIVQDLTSKTTLSVLIDQSAALGDTILLSRFDLELKKGGRPFLSLRSYLSGETREKR 365 Query: 379 NG---WLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPD 435 N L + ++ T S LS +I + RR+WFF DE+P ++P Sbjct: 366 NPLPVILPVHPDSKTLTSAFVSAVFTLSSSIVTNFPDAKPNARRIWFFLDEVPQAGRIPP 425 Query: 436 LVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAG 495 + + L AR G V G Q+ AQ+ + YGEK + + + F + S + ++ + Sbjct: 426 ITDFLVTARSKGCRTVLGFQTPAQVAETYGEKTLEIWDNATSVKVFLQCVSPEAKKYVSQ 485 Query: 496 EIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL-----PDLTCYVTLP 550 IGE+E L + + G P G +T ER+ LVS + SL +T V + Sbjct: 486 SIGEREILAFKKSDNIGIAPTHTGHTTNWVDEREKLVSPDEAASLLGPGKNGVTGIVQIA 545 Query: 551 GPYPAVKLSLKYQTRPKVAPE--FIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVP 608 G P L+ ++ PK A + + + S E E +++P+ Sbjct: 546 GCDP-ALLTWPFRNYPKAAEARQLVALPLRGTLAPD-SPEGEESERERIPENEVYQPETR 603 Query: 609 EVVSGEDVTQAEQPQ---------QPVSPAINDKKSDSGVNVPAG 644 + + +P P + D +S V AG Sbjct: 604 QNTKEPGQMKGPEPASVRITPLSKPPEASGEKDGGEESPVGEIAG 648 >UniRef50_A3ETT1 Probable conjugal transfer protein (TraD) n=1 Tax=Leptospirillum rubarum RepID=A3ETT1_9BACT Length = 697 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 136/573 (23%), Positives = 234/573 (40%), Gaps = 42/573 (7%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD-GKDSDIRI 174 + V+ ++F V + R + G QL + + + ++ G+ I + Sbjct: 87 LLTWKVVSSLSFVFVGIAVMRLARGPEPVRHKRGDQLRKDAVTIRKQIRTRYGRPDGIFV 146 Query: 175 GD-LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 + I E+++F L G+ G+GK+ V+ + + A QRGD +I+D G+F + D Sbjct: 147 HPEIRIPEPLEVRSFSLVGSPGSGKTTVLNGMVDQAIQRGDRSLIFDFKGDFTERIPD-G 205 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYL 292 +IL+P DAR W L + T+ + LIP+ + + W + R I + Sbjct: 206 KKRILSPWDARAVRWALGSDVSTEVQARLLSECLIPINPRANEQMWGNASRAILRAELHK 265 Query: 293 MRNDPNRSY------SKLVDTLLSIKIEKLRTYL---RNSPAANLVEEKIEKTAISIR-- 341 + + ++ L+ +L +++ L N A+ +V++ KT +S+ Sbjct: 266 LMAERRGTWGFHELGDALLADILCPDSDRVVQTLVTRFNPEASRIVQDLTSKTTLSVLID 325 Query: 342 --AVLTNYVKAIRYLQGIEHNGEPF-TIRDWMRG-VREDQKNGWLFISSNADTHASLKPV 397 A L + + R+ + ++ G PF +R ++ G +R L + ++ T S Sbjct: 326 QSAALGDALLLSRFDRELKKAGRPFLPLRSYLSGEIRGTPPPVILPVHPDSRTLTSAFVS 385 Query: 398 ISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSY 457 LS +I E RR+WFF DE+P ++P + + L AR G V G Q+ Sbjct: 386 AVFALSSSIVTHFPDAEPSARRIWFFLDEVPQAGRIPPITDFLVTARSKGCRTVLGFQTP 445 Query: 458 AQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVR 517 AQ+ + YGEK + + F + S + ++ + IGE+E L + + G P Sbjct: 446 AQVAETYGEKTLEIWDNATGVKIFLQCVSPEAKKYVSQSIGEREVLAFKKSENVGIAPAH 505 Query: 518 DGVSTGKDMERQTLVSYSDIQSL-----PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 G +T ER+ LVS + SL +T V + G PAV L+ ++ PK A Sbjct: 506 TGHTTNWVDEREKLVSPDEAGSLLGPGKNGVTGIVQIAGCDPAV-LTWPFRNDPKAAEAR 564 Query: 573 ------IPRDINPEMENRLSAVLAAREAEGRQMASL----FEPDVPEVVSGEDVTQAEQP 622 + + PE R + EG EP V QP Sbjct: 565 RLLTLPLRGTLAPEAPGRSGSERERVPEEGIDRPETRREAKEPGRRIRPEPASVRVTPQP 624 Query: 623 QQPVSPAINDKKSDSGVNVPAGGIEQELKMKPE 655 P A +D+ P G I QE Sbjct: 625 SAPGKEAGDDE-------SPVGEIAQEALASAA 650 >UniRef50_C6RJZ5 Putative uncharacterized protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJZ5_ACIRA Length = 506 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 127/507 (25%), Positives = 219/507 (43%), Gaps = 49/507 (9%) Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL---------ITFFVVSWILGRQGKQ 140 + A VL K+ I EQ A + A + L + +V++W + K Sbjct: 22 ITAWVVLLPKFFIIPQEQKVKAILYALPLTFKTPLYVLILLVVLVISWVIAWFYFQNNKT 81 Query: 141 QSENE----VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGA 196 E V G QL +P ++ + G IR +P+ +D + ++F L G G Sbjct: 82 PFAGERYVKVLRGLQLV-SPYKFKKLTTEKG--YQIRFCGMPVPKDLKYKHFLLTGGTGQ 138 Query: 197 GKSEVIRRLANY----ARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWK 252 GKS I + AR + +++ D +G + +Y D I NP DAR +W + Sbjct: 139 GKSVSISDFLDSCVSDARSKT-RLIVVDPNGSYTSLFYKKG-DVIFNPFDARSVSWSIIN 196 Query: 253 ECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYLMRNDPNRSYSK----LVDT 307 E D + + TLIP + + + RTI A + P+ S S +DT Sbjct: 197 EVRNPYDIETYSATLIPKSSDAKHENFNSMARTIIKSAMSKVLEMPDISKSAKAQLFLDT 256 Query: 308 LLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIR 367 LL+ ++LR +L +PA +L+ + ++R+++T Y+ + F+ R Sbjct: 257 LLNSSDDQLRDFLMGTPAFSLL--GNTELVGTLRSIITTYLTPHTHNSI-----GDFSFR 309 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDEL 427 D+++ G +FI+ D +L+P++S + LL+ +N + V F DEL Sbjct: 310 DYLKN-----GEGNIFITWREDQLTALQPLVSCITDVVCSSLLSDFDNYSDFV-FCLDEL 363 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF--RSP 485 +L++L L +L + RK + GIQS AQL IYG+K + +L ++ + Sbjct: 364 GSLNRLSYLEAVLTKGRKHRLIALAGIQSLAQLITIYGDKFSITLRGCFSSFGVCAVNAQ 423 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + G E L+ + +D S E++ +V +I SL L Sbjct: 424 DTYTPQEYEKSFGAIEVLRKMKS------SHKDAKSE-LVKEKENVVKAEEISSLQPLHF 476 Query: 546 YVTLPGPYPAVKLSLKYQTRPKVAPEF 572 Y+ G YP + +KY++ KVA + Sbjct: 477 YLKFSGHYPPTLVKMKYRSYAKVAASY 503 >UniRef50_Q21BL2 Putative type IV secretory pathway VirD4 components n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BL2_RHOPB Length = 602 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 113/550 (20%), Positives = 220/550 (40%), Gaps = 29/550 (5%) Query: 82 QYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQ 141 G+ + + Q L + E + V + +A ++ L F + + K Sbjct: 64 DRNGEAYWLLCRQQLSQSRALDGFEIRFWT-VFGSSIAALVALFGFALSLRLDSPALKII 122 Query: 142 SENE-VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE 200 GG L + A + G+ + + +PI R+ E ++F + G+VG GK++ Sbjct: 123 RGARLHAGGPGLKAFARAAAVECRIHGEGVAL-VPAIPIGREREARHFLILGSVGGGKTQ 181 Query: 201 VIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDF 260 + L + A RGD +++ D G+ + ++ P D R WD+ +C + D Sbjct: 182 TMLNLIDGANARGDGILVLDTKGDMMGGLPAQGDPLLVAPHDRRSLVWDVAADCSIKQDA 241 Query: 261 DNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY-SKLVDTLLSIKIEKLRTY 319 A IP + DP W + + IF ++ + + ++ +++ +++L + Sbjct: 242 RELAARFIPPSS--DPMWSQAAQEIFVACIVHLQATRGQDWGWADLEAVVTADVDQLTVF 299 Query: 320 LR--NSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN--GEPFTIRDWMRGVRE 375 + N A L+ + KT SI +++ + L + E F+IR W+ Sbjct: 300 AKDHNPNALRLLNQPDSKTTQSILTTFQTHMRIVSVLAEAWPDRSAERFSIRAWLHKPIP 359 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA--MGENRNRRVWFFCDELPTLHKL 433 + L + + + I L + + + + E+R RRVW F DE P L + Sbjct: 360 YRP---LILQHDPGYPELSRIWIGSMLGLLASAVGSPTLSESRQRRVWLFLDEFPQLPPI 416 Query: 434 PDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFA 493 L R G V G Q AQ+ +YG+ A S F + T+ R + + AE Sbjct: 417 KQFATFLELGRSKGVAVVIGAQDTAQIRAVYGQDQAKSWFGMTGTKIITRINASEAAEDI 476 Query: 494 AGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS-LPDLTC---YVTL 549 + IG++E ++++ + + V+ E + +V+ S++ S L + + Sbjct: 477 SRLIGDQEVERSTQSATRTSGK--TSVTESIQREIRRVVTASELASHLGPTKGGVRVLFI 534 Query: 550 PGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPE 609 +L L Y + PK+ +P D + AR ++ ++ EP P Sbjct: 535 GLGEDVYELELPYLSLPKLREPIMPAD--------WTQPSVARASKTDSGETIPEPSPPP 586 Query: 610 VVSGEDVTQA 619 +D+ Sbjct: 587 SRLTKDLADK 596 >UniRef50_Q3SI88 Putative type IV secretory pathway VirD4 components n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SI88_THIDA Length = 784 Score = 318 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 141/690 (20%), Positives = 262/690 (37%), Gaps = 52/690 (7%) Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 W L+ +P G+ LHDK + + + +A V + Sbjct: 41 WGWVLQSQGLGFHVEPALHHLLPGRQL----GDRLHDKTVAFMQAEHPAALKALEVGPQI 96 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD-IRIGDL--P 178 L+ +V W++ +++ GR+ +A +K +G+ +D +RI P Sbjct: 97 AGLLAGGLVFWMVYGDVVIATQDRHIRGRRRLKGAAALAAWVKDEGEAADGLRIHPKLPP 156 Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD------- 231 I + E ++ + G VG+GK++ + L AR+RGD +I+D G+F + Sbjct: 157 ISKSRETRHILIVGGVGSGKTQTLLPLMRAARERGDRAIIFDFKGDFTPDFPSCTARHKG 216 Query: 232 ---PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIF 286 D I P D+R W + ++ T A +I P G P W + R + Sbjct: 217 RAIEVEDVIFAPWDSRSTLWAVARDVDTLSAAREFAARMIVEPGGGSGSPMWANAARQVL 276 Query: 287 AEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN---LVEEKIEKTAISIR 341 +++ + ++ LV L +++L R L + + T I+ Sbjct: 277 VACLVELQSTKPGDWGFADLVAGLTR-PVDQLTEAARRYFPEAVKALGDGQQNVTTAGIQ 335 Query: 342 AVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 L +Y+ I L F+IR+W+ V ++ + + + + S Sbjct: 336 INLMSYLAVIFDLARAWPGPGIFSIREWLTEV-GARRVKTVILQHDGRFETLARAFNSAV 394 Query: 402 LSIA---IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 L +A I+ L +++ R++W F DE P L K+ ++ + R G V G+Q + Sbjct: 395 LGLAGQLIKSNLVR-DSKERKLWLFLDEFPELGKVETVLSLAAVGRSKGIRVVLGLQDIS 453 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEI-GEKEHLKASEQYSYGADP-- 515 Q++ IY E S+ ++ T+ + + A++ A + G+++ + + GA Sbjct: 454 QVKKIYSEHDTNSIVSMVGTQVIAQVSPGETAKYIAENLIGDRDLERLGVSITSGAGRAP 513 Query: 516 ---VRDGVSTGK-DMERQTLVSYSDIQSL-PDLT---CYVTLPGPYPAVKLSLKYQTRPK 567 G T K + +R+ +V S++ L PDL V + G V L + P Sbjct: 514 GIFTSGGNRTSKWEDKRELVVLPSELLQLGPDLDLGGVKVWMSGIGEDVLEVLIPFSDPN 573 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 F P + + + +A A Q S P E + DV P S Sbjct: 574 ---HFRPSSVIADWTRYPNQPIAPAVATPAQEPSQPVPSWAEEAAEADVA--PLLVTPTS 628 Query: 628 PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPP-GISESGEVVDMAAYEAWQQENH 686 PA+ + ++ + + P E P + GE + A ++ Sbjct: 629 PAVTPVANPWADDIDGDEAGEGEESAPAPETTTATDPLAFLDDGESTEKTAAAEFETRML 688 Query: 687 P-----DIQQQMQRREEVNINVHRERGEDV 711 P Q Q +EE ++ E + V Sbjct: 689 PIATPLSSQLADQAKEEATESIAGELAQQV 718 >UniRef50_B8KYV9 Putative type IV secretory pathway VirD4 component n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYV9_9GAMM Length = 636 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 108/628 (17%), Positives = 219/628 (34%), Gaps = 53/628 (8%) Query: 42 GLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYM 101 GL+ I+ T+ W + G + + Sbjct: 30 GLLSGACIAALTYPVALWLGWQIPSSHSLMNYGQALTGSLAALGNLATGTIS--FREPAA 87 Query: 102 IWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR 161 + A V +T + +W+ R+ +S GG QL + +A Sbjct: 88 AFWEVAKEQATFGTLARVGVAAGLTGWTSAWVTRRELAPRSNMWHIGGNQLLSGKEAIAE 147 Query: 162 MLKKD--GKDSDIRIGDLPIIRDSEI------QNFCLHGTVGAGKSEVIRRLANYARQRG 213 ++ K+ + L + RD + ++ ++G+VG+GKS +++ L + Sbjct: 148 ARRRSLTKKEQRDELHALSLHRDWTVSKKLLARHMFIYGSVGSGKSVILKHLLEQVVKLD 207 Query: 214 DMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 IYD G+F + P+ I+ P D R WD+ ++ TQ + ++IP Sbjct: 208 KKAFIYDIKGDFTSIFERPA---IVCPFDKRSWIWDVGQDVATQTQAAAFSQSIIPPEEG 264 Query: 274 EDPFWQGSGRTIFAEAAYLMRNDPNRSY-SKLVDTLLSIKIEKLRTYLRNSP--AANLVE 330 FW + + + ++ +++ + L++ E + L AA L+ Sbjct: 265 SGAFWASAAQALLEGCVRELQATKGKNWGWADLAALVARPAEPMAKALSLYYPRAAALIA 324 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP---FTIRDWMRGVREDQKNGWLFISSN 387 T S AVL N I L +P F++ DW++ E +K + + S Sbjct: 325 NPDSNTTSSCMAVLANGTAVIERLALAWPERKPDCMFSMLDWIKDSYEGRKQ--VIVQSG 382 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMG---ENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 D + IS +++A+ +++ + R + FF DEL ++ +L + +L R Sbjct: 383 PDE-VLARSYISAMINVAVPEIISPSLPDDESGRFLGFFFDELSSVGQL-KIEPLLALGR 440 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 G +Q ++Q+E +YG+K A + ++ T + + E + +G++ Sbjct: 441 SKGVVACMAVQDWSQVEKVYGDKTAQAFSGLVGTHIICQLQVGETREKISRNLGKRTVAW 500 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI---QSLPDLTCY----------VTLPG 551 + D + + E +++V + Y V G Sbjct: 501 RTHD---------DKATVHE--ESKSVVPPGRLTDDLGFRKGKAYGKERWGIRAIVQTTG 549 Query: 552 PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVV 611 + L + PKV R + R ++ + A + Sbjct: 550 D--LLLLDWPGVSYPKVREG-QKRARWTKQGARPVEQKPMSPSDAQSAAEVQRVLKMTAD 606 Query: 612 SGEDVTQAEQPQQPVSPAINDKKSDSGV 639 Q P A++D + ++ Sbjct: 607 QAAAELQKRGATPPKLRAVSDDELEAIF 634 >UniRef50_B7Q9R6 Coupling protein TraD, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q9R6_IXOSC Length = 308 Score = 275 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 5/311 (1%) Query: 271 GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVE 330 G+ D FWQ S +F + R+ + L L + + L + L+ + AA Sbjct: 2 GSGNDQFWQNSSEILFISCVESLIKKDCRTITSLKKILTKVNRQDLASLLQGTRAARYFS 61 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 ++ TA SI +V+T V+ I LQ + + F+++ + + E N WLF++S+ Sbjct: 62 KQNTTTAESILSVMTTGVRPICLLQD---SKQQFSLKQYFYNI-EKGSNSWLFLASSPSQ 117 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 P+++ L +A+ L+ G N RR+WF DEL +L +L L +L E+RK+GGC Sbjct: 118 REVTLPLLACILELAVSYLIESGINEQRRMWFVIDELASLGRLNSLSSLLAESRKYGGCV 177 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 + QS QL D YG A ++LFD T+ FRS A G E+ + S Sbjct: 178 MAATQSLNQLFDKYGHYAGSTLFDQFATKFMFRSTDPSTARLITDIFGNVEYASQQKNTS 237 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP-YPAVKLSLKYQTRPKVA 569 YGA RDGVS + +R++L++ +DI SL DL C+V LP P KL L Sbjct: 238 YGAHEHRDGVSYTEQEKRKSLITTNDIASLKDLECFVGLPDPQIRITKLQLSPAQVEHKN 297 Query: 570 PEFIPRDINPE 580 ++P ++ E Sbjct: 298 KGYVPLSLSEE 308 >UniRef50_B2FKA6 Putative type IV secretory protein conjugation protein TraD n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FKA6_STRMK Length = 624 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 87/434 (20%), Positives = 178/434 (41%), Gaps = 25/434 (5%) Query: 113 VLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLK-----KDG 167 V V L+ + + + + S G +L + + V KD Sbjct: 99 VATWSRIGVSLLLAAGLGLRVFLKATEPVSNTWHLSGPRLLEGKEAVDEARHRSVTPKDA 158 Query: 168 KDSDIRIG---DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYA-RQRGDMVVIYDRSG 223 + + DL + + ++ + G+VG+GKS +++ + R+R + +YD G Sbjct: 159 EADPFALSLHPDLLLSKKHWARHVLITGSVGSGKSVILKHILEQLTRKRDAKLFLYDIKG 218 Query: 224 EFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGR 283 +F + P I++P DAR WD+ + T A +LIP G FW + + Sbjct: 219 DFTSIFKRP---IIVSPFDARSHVWDVAADVRTPTQAAAFAASLIPEGDGNAKFWSMAAQ 275 Query: 284 TIFAEAAYLMRN-DPNRSYSKLVDTLLSIKIEKLRTYLRNSP--AANLVEEKIEKTAISI 340 + ++N P + L+ ++ +R A LV + +T S+ Sbjct: 276 DLLIGCVRELQNTRPGEWEWPDLAALVRRPAAEMAAGMRPHYPRGAALVRDPESQTTSSV 335 Query: 341 RAVLTNYVKAIRYLQGIEH--NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 + L + + I L F++ +W+R +K + + S D K I Sbjct: 336 LSSLGGFTRLIDDLATAWPKVGKRRFSMTEWIRDDYNGRKQ--VIVQSGPD-PTLTKAYI 392 Query: 399 SMWLSIAIRGLLAMG---ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 + +++A+ L+ G + R ++F DEL + +L ++ +L R G + +Q Sbjct: 393 AAMINVAVPDLIGPGLPDDEGGRGLYFVFDELTSAGRL-NIDPLLALGRSKGVVAIMAVQ 451 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH-LKASEQYSYGAD 514 ++Q+E +YG+K A + ++ T + + A ++G+++ + E + + Sbjct: 452 DHSQVELVYGDKTAQAFSSLVGTHVVCQVQMGATRDKLASQLGKRKIAWRGHENKAQVHE 511 Query: 515 PVRDGVSTGKDMER 528 R VS+G+ +R Sbjct: 512 ESRALVSSGELTDR 525 >UniRef50_A6BIV1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A6BIV1_9FIRM Length = 436 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 81/408 (19%), Positives = 147/408 (36%), Gaps = 40/408 (9%) Query: 177 LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDPS 233 +PI ++ L G +G GKS + R D+++I+D G+F K +Y P Sbjct: 43 IPIGEHILSRHMLLLGGIGTGKSNAFNHIIRNTRSNLTNEDVMIIFDTKGDFYKEFYRPG 102 Query: 234 IDKILNPLDARCAA------WDLWKECLTQPDFDN----TANTLIPM--GTKEDPFWQGS 281 I N DAR W++++E + A PF+ + Sbjct: 103 DVVISN--DARATGGSEADYWNIFEEVTIDDRVEENILEIAKGFFAEKLEHTTQPFFPNA 160 Query: 282 GRTIFAEAAYLMRNDPN----RSYSKLVDTLLSIKIEKLRTYLRNS----PAANLVEEKI 333 + +FA + + R+ L L SI + L + + ++ Sbjct: 161 AKDLFAALMLHLVRNDKFADKRNNKSLRSYLNSITPHIMVDILNQHSDLKAMQSYIYDEK 220 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 + + A L ++ I ++ + G ++R +R + +F+ + Sbjct: 221 SGQTLGVMAELQQMMREI-FIGNFQKKGG-LSMRKLVRR----KGGRVIFVEYDLGIGGM 274 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 L P+ + + +AI+ L N V+FF DE + L + + + R G + G Sbjct: 275 LMPIYRLLIDLAIKEALCRTSNEGN-VYFFIDEFRLVPHLEHIDDGVNFGRSLGAKFFVG 333 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 IQ+ Q+ YGE S+ T FR E+ G + +Q SY + Sbjct: 334 IQNIDQVMAAYGEYTGRSILSGFGTTFAFRVNDVGSREYIKNLFG-----RNIKQQSYMS 388 Query: 514 DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 G + + +V DI +LP V+ P P + Sbjct: 389 KVQNRG--IAEQLREGYVVEDDDINNLPVGEAIVSAPSGEP-FRFKFN 433 >UniRef50_A4JFK6 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFK6_BURVG Length = 818 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 95/473 (20%), Positives = 173/473 (36%), Gaps = 57/473 (12%) Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSEN-EVTGGRQLTDN-----------PKDVAR 161 + L + + R+G S+ + G +L ++ R Sbjct: 44 WGLGLRLAVSASLALASGGYVLRRGLIPSDALMHSRGLRLLKGRDAIRRAKKTCAGEIKR 103 Query: 162 MLKKDGKDSDIRIGD-LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD 220 K + D+ + + ++ + G VGAGK+ + +L R D V+++D Sbjct: 104 ASKLANRGRDLMFSPEICFAPERWARHIMVVGAVGAGKTVFLTQLLAQILARKDRVLLFD 163 Query: 221 RSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG 280 +F + I+ D+R AWD+ ++ T+ A LI +DPFW Sbjct: 164 IKRDFTMYFK---HAIIIAATDSRSWAWDIARDVATRQAAQQFAKQLI--EDSKDPFWSA 218 Query: 281 SGRTIFAEAAYLMRNDPNRSY--SKLVDTLLSIKIEKLRTYLRN--SPAANLVEEKIEKT 336 + R + ++ + + +L D L + L ++ A +V E + Sbjct: 219 AARALLVGFIVMLVAEKKEDWGFPELADVLQNTPESDLPAIMKEYSPEAMEIVAEAKGRD 278 Query: 337 AI--------SIRAVLTNYVKAIRYLQGIEHNGEP--------------FTIRDWMRGVR 374 A SI+ + Y AI L + P F+ +WM + Sbjct: 279 AAANPNQAAKSIKMTMQTYCSAIYDLATAWKDEPPDPNDPEGKPKRRPRFSAVEWM--MN 336 Query: 375 EDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR---------VWFFCD 425 D ++ + + + + IS SI + A+ E R +W FCD Sbjct: 337 PDTRHRQVILQGDKTVEPLTRAYISQIFSIVSSRIGALPEARTVPPRTDGKSNAIWLFCD 396 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 ELP L K+ + R +V G+QS QL +IYG++ A+S M T R Sbjct: 397 ELPALGKIEAFDAAITLGRSKDVRWVAGLQSIEQLHEIYGKEKASSWVANMGTIVVGRVA 456 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQ 538 A +G+KE + + S GA+ G + + +++ S++ Sbjct: 457 PGATATQVKDMVGKKEVERPNWSASGGANG--QGWTFMTSRDEMSVIYESELS 507 >UniRef50_A7BSA0 TraG/TraD family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSA0_9GAMM Length = 667 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 99/480 (20%), Positives = 177/480 (36%), Gaps = 44/480 (9%) Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLAN--YARQRGDMVVIYDRSGEFVKSYYDPSIDKI 237 RD + G +G+GK+E + N + + V+I+D G++ + Y D I Sbjct: 123 PRDF-TKTVFALGGMGSGKTEFFFSILNENWGYRHFKRVIIHDPKGDYTEKLYRSDQDYI 181 Query: 238 LNPLDARCAAWDLWKECLTQPDFD-NTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND 296 NP D R AAWD+W + P + LI T+++ F+ S + E Y M Sbjct: 182 FNPYDKRGAAWDIWADMHAYPVLIVSFLKNLIESQTQKEDFFSSSAVNVLKE--YFMETH 239 Query: 297 PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQG 356 + V+ I ++K+ TY + S + T SI + + ++ +R L Sbjct: 240 FSAKGKSSVEK-WRILLDKIDTYRKQSAG--------KPTEGSIYSTIALAIETLRLLAF 290 Query: 357 IEHN--GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 I + F+IR ++ LF+ +N A L + +LS+ LL+ + Sbjct: 291 IATTNPKKQFSIRYFLSS-----SGSKLFLLNNPAYSAPLNALFVGFLSVITEALLSQPD 345 Query: 415 NRNRRVWFFCDELPTL-HKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 DE +L ++L + R GG + G Q + + + +S F Sbjct: 346 TTGNLSLLVLDEFLSLKFNQETKTKVLTQIRSKGGALLLGAQFLPKENKLEQQLLDSSRF 405 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEH------------LKASEQYSYGADPVRDGVS 521 + FFR + GE E+ S +S G +G+S Sbjct: 406 AL----IFFRLSDIETVNHIQEMFGEIEYTHYENSINEGENSNWSIPFSIGGGK-NEGMS 460 Query: 522 TGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEM 581 ++++ + +QS+P +P KV F+ RD+ Sbjct: 461 INTSLQKRKFIKPEMLQSMPQYHHITFIPEDNIIYLGYTPLVQLEKVNRAFVQRDLTLFY 520 Query: 582 ENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNV 641 + + V + + + +P +T+ Q P +P ND + DS N Sbjct: 521 QKPFNVVGDLPSQKRNERSETQKPRKVVA----KLTKTPQSIVPKTPEENDIQVDSLGNE 576 >UniRef50_Q8R8F9 ATPase involved in conjugal plasmid transfer n=3 Tax=Clostridia RepID=Q8R8F9_THETN Length = 667 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 105/655 (16%), Positives = 212/655 (32%), Gaps = 59/655 (9%) Query: 36 FFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQV 95 F + L W+ + T + + + + Sbjct: 1 MFLLYAFLTAWLFVPLIKTFQLLSQLNPQTSS----------KIDFTPIKQMYTNPLLSL 50 Query: 96 --LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLT 153 L + L + + + I ++ + QG + ++ T G Sbjct: 51 KELTNP------ATLKAYLIFLLISIPAIAVLVILARATDYRTQGVKYLRDDGTHGTANW 104 Query: 154 DNPKDVARMLKKDGKDSDIRIGDL-----PIIRDSE-IQNFCLHGTVGAGKSEV-IRRLA 206 ++ ++L G + + +G + + DS +N + G+ G+ KS IR Sbjct: 105 MTVQEAKKIL-GIGTNKGLILGRIGSKVVTLPPDSFLNRNVAIFGSPGSMKSRAYIRTNI 163 Query: 207 NYARQRGDMVVIYDRSGEFVKSYY-----DPSIDKILNPLD-ARCAAWDLWKECLTQPDF 260 + G +VI D GE + K+ N ++ W+ + D Sbjct: 164 LQLAKEGQSMVITDPKGEIFRDMAEFLKNRGYTIKVFNLVNMKHSDRWNPIETIQDDIDA 223 Query: 261 DNTANTLI-----PMGTKEDPFWQGSGRTIF-AEAAYLMRNDPN--RSYSKLVDTLLSIK 312 +I DPFW + + + A A Y+ P R+ + + L S + Sbjct: 224 QLFVEVIISNTKVATTKSGDPFWDRAEQNLLKALALYVAMEYPEHERNLASVYSLLASAE 283 Query: 313 IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI---RDW 369 + + + P ++ + A + V T + + + N I D Sbjct: 284 PRAVDSVFKTLPNSHPAKMPYNIYAQANETVRTGIIIGLGTRLQVFQNKMVQKITETSDI 343 Query: 370 MRGVREDQKNGWLFISSNAD-THASLKPVISMWLSIAIRGLLAM-GENRNRRVWFFCDEL 427 + +K + ISS+ D T L + +L I + M G N V+F DE Sbjct: 344 DLELPGREKCAYFCISSDTDSTFDFLAGLFFSFLFIKLTRYADMNGGTLNPNVYFLLDEF 403 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSH 487 P + +PD + + R G Q+ +QL++ Y A + +TR F Sbjct: 404 PNIGAVPDFTKKISTMRSRGIHSSVVFQNISQLKNRYPNDAWQEIIGNCDTRLFLGCTDV 463 Query: 488 KIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 A+F + +G+ + + G + + D + +++ L++ +I L V Sbjct: 464 ATAQFVSDLLGQATVEARTFRKHAGLEGLFDFGDISLNTQKRPLLTPDEILRLDHRNAIV 523 Query: 548 TLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV 607 L G P + + Y P + + V EP+ Sbjct: 524 ILRGQKPLMVEKMDYIKHP--------------LSKEIRPVPITEYIPEWAKEETREPEP 569 Query: 608 PEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQL 662 V ++ + E + S I++ N G ++ + E +++ Sbjct: 570 KPVDELKNELKKEHKNESASKPISEPAETVENNRKPAGSIKDREEPSENIAAEEV 624 >UniRef50_B7KK02 Transfer complex protein TrsK-like protein n=4 Tax=Cyanothece RepID=B7KK02_CYAP7 Length = 569 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 108/578 (18%), Positives = 201/578 (34%), Gaps = 59/578 (10%) Query: 97 HDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE-VTGGRQLTDN 155 D+ + + + + L+ CL +++ + GK+ + GGR Sbjct: 11 ADEPFARAFDNMSRSISPGQGMMLLACLGFVGLLALMGKTGGKKGKLAKGYFGGRSEKSA 70 Query: 156 PKDVARMLKKDGKDSDIRI----------GDLPIIRDSEIQNFCLHGTVGAGKSE-VIRR 204 K VA + K + + + G P+ + + G G GK+ VI + Sbjct: 71 AKRVALKQMRHKKKNAVSVWVGTPTQNPLGKSPLYLPDAQRGMAVLGAPGTGKTVSVIDQ 130 Query: 205 LANYARQRGDMVVIYDRSG-EFVKSY-----YDPSIDKILNPLDARCAAWDLWKECLTQP 258 +A ++G ++++D + I P + + + Sbjct: 131 VAISVIEQGFPLILWDFKFPTQTSRLAAYAVKNGYELHIFAPGYSESEVCNPLEFLKDDT 190 Query: 259 D---FDNTANTLIPM-----GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY--------S 302 D A + T ED F+ +G + L R Sbjct: 191 DSMMARQFAEVMNQNFKRSGQTSEDGFFGPAGDQVTEAIMMLARGTEFPDLMMCQALASR 250 Query: 303 KLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 + + +KL ++ S + + EKT SI A + Sbjct: 251 TDLAAQIIKHKDKLNPWVLASFGQLISSAQSEKTVSSILATANINFTRFMKADVLPAFCG 310 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWF 422 TI ++ G + L + + + L P+I+ L + + ++ R+ ++ Sbjct: 311 KTTIPTFLEGKQ------MLVLGLDREKRDVLAPLIAAILHLLVNRNVSR--KRSDPLFL 362 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF 482 DE+PTL+ LP L L E R+ G C V G Q+ Q+E +YGE A ++ T+ F Sbjct: 363 LADEVPTLY-LPGLHHWLNENREDGLCTVLGFQNLVQMEKMYGEDLARAIIGGCATKIIF 421 Query: 483 RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD 542 A+ + +G KE +Q S G + + + ++ + L SD LP Sbjct: 422 NPQDQDSAKLFSDYLGLKEV--KFKQKSKGRSGGKASTNISEQIQTKPLFEASDFLQLPT 479 Query: 543 LTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAE-GRQMAS 601 C + P + R K A +IP + ++ N +L E + Sbjct: 480 GRCILLNP-----------HFKRGKSA--YIPLLESIDLSNDYQTILKWSETRWDKVRGG 526 Query: 602 LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGV 639 L ++GED+ Q Q + P +K +S + Sbjct: 527 LQGRSTQTPITGEDLAARYQLAQNMFPGGKNKGEESEL 564 >UniRef50_C2HF17 Putative uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HF17_PEPMA Length = 432 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 76/419 (18%), Positives = 161/419 (38%), Gaps = 41/419 (9%) Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR---GDMV 216 + LK +G+ D ++ + D ++ + G+ G+GKS + + + + D++ Sbjct: 22 SNFLKFEGEK-DGKMASFTMSEDQLSKHLLMLGSTGSGKSTLFFHIIKQLKAQMTNEDVM 80 Query: 217 VIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQ--------PDFDNTANTLI 268 +I+D G++++ +++ D ++ + + W+++++ L + + +L Sbjct: 81 IIFDTKGDYIQRFFENG-DLFIDNITDTSSKWNIFRDILADGTDDEHIKQNCNEICKSLF 139 Query: 269 PMGTKE--DPFWQGSGRTIFAEAAYLMRNDPNRS---------YSKLVDTLLSIKIEKLR 317 K + F+ + + + + + ++L L S K++ Sbjct: 140 KERVKNTTNAFFPNAASDVLSSILLSLTRAGVQDKNVRKKMFYNNELRSLLDSCDENKVK 199 Query: 318 TYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYL-QGIEHNGEPFTIRDWMRGVRED 376 L + V I + VL+ +R + G F+IR+++R Sbjct: 200 AMLASHKDLVAVNSYISYPGPQSQGVLSEMFSVVRDIFVGNFAKKGNFSIRNFVRN---- 255 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDL 436 + LFI + SL P+ + A++ ++ + V+ CDE + L + Sbjct: 256 KGGKTLFIEYDLAKGNSLTPIYRLCFDQALKEAMSRNQKTGN-VYLICDEFKLIPLLEHI 314 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 + + R G + GIQS QL DIYGE A ++ +T FR+ E+ + Sbjct: 315 EDGVNFGRSMGLKILAGIQSIEQLVDIYGESRAMNIMAGFSTLISFRTNDMASREYVSNL 374 Query: 497 IGEKEHLK-ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP 554 G+ ++ + + R G + V SLP V LP P Sbjct: 375 YGKNLIIEDYQKSDLTMVEEKRLGQT----------VEDWHQNSLPVGQAIVGLPFSQP 423 >UniRef50_B4B5T3 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5T3_9CHRO Length = 641 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 100/506 (19%), Positives = 186/506 (36%), Gaps = 48/506 (9%) Query: 186 QNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGEFVKSY-------------YD 231 + + G G+GK+ VI R A ++G +++YD+ G+ V+ + + Sbjct: 139 RGILVIGAPGSGKTASVIDRAIESAMRQGHSILVYDKKGDQVRLHAALATRYGYSVEVFA 198 Query: 232 PSIDK--ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEA 289 P ++NPLD D F +++ T +K + F++ +G + Sbjct: 199 PGYSYSGVINPLDFVTGPEDTTMAGEIGKIFTSSSRT---GESKGNEFFETAGEMLARGL 255 Query: 290 AYLMRNDPNRSY-------------SKLVDTLLSIKIE--KLRTYLRNSPAANLVEEKIE 334 L + R ++ ++ K+ ++ S + + + E Sbjct: 256 VQLAKASNYRDLAQVYAFIQLPNFVERIYHSIYRPDKHPLKMNPWIAPSFSQLMSSKDAE 315 Query: 335 KTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASL 394 KT I+A A + TI + ++ LF + + L Sbjct: 316 KTVAGIKATAEMVYSAFIQRDLLRAFIGKSTI------PIKLKEKQILFFQLDDERRTVL 369 Query: 395 KPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 P+I+ L + I L+ + R +F DE P++ +LP V + E R GG V GI Sbjct: 370 APLIAAALHLCIVSNLS--QKRTNPFCYFLDEFPSIGRLPRTVNYVNEYRSNGGVPVLGI 427 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY--SYG 512 QS QL D YGE+ ++ ++T F + AE + GE E + S SYG Sbjct: 428 QSLEQLYDTYGERQGKAIASALSTHVLFYPGDYNTAEQYSKRYGETEVVIRSRSTGNSYG 487 Query: 513 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ-TRPKVAPE 571 + + + ++ L+S +I P C +T P + Y+ P E Sbjct: 488 GSQTSRSTNWSEQIHKKPLLSPDEILRFPQGECVITSPAYGSGKEALFPYKLKIPIEQRE 547 Query: 572 FIPRDINPEME-NRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQP--VSP 628 F + + + + L R ++ L E ++ ++ P ++ Sbjct: 548 FKRASESEALWDSVIRPQLEQRAFNWAKLQELDEENLHLEITKRIEEAFRMLPMPGELAD 607 Query: 629 AINDKKSDSGVNVPAGGIEQELKMKP 654 + DK + + Q LK P Sbjct: 608 GVVDKNNSDYKEQMKKIVAQTLKKLP 633 >UniRef50_A5ESM8 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESM8_BRASB Length = 573 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 97/579 (16%), Positives = 193/579 (33%), Gaps = 76/579 (13%) Query: 32 CLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMN 91 + +F + ++ L+ + +W EG P+ + +T N Sbjct: 23 GVMVFSFFIITLLAPFDNPN---ITPAYFWRTVWDEGFHRHCGPGPLQVFDFDCRT--AN 77 Query: 92 AAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQ 151 L L I T + + T R+ Sbjct: 78 LRGWLAWPPF---------YLRLCLFFGCTIIAATLAAIWSW-----------KHTSPRE 117 Query: 152 LTDNPKDVARMLKKDGKDS---DIRIGDLPIIRD------------SEIQNFCLHGTVGA 196 + + +G+ S + + +P +E N + G G+ Sbjct: 118 TVRTIRGLWPKFGAEGRASLRKAVAVTGIPQPDSLWLAPYVQLTPVAEASNILVIGDQGS 177 Query: 197 GKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKIL--NPLDARCAAWDLWKEC 254 GKS VIR A RG+ +I+D G+ + ID+IL P DAR WD+ ++ Sbjct: 178 GKSAVIRGWAEQILARGERSIIHDAKGDILA---CAPIDEILLVAPHDARGWTWDIGRDV 234 Query: 255 LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIK 312 + A L+P G++ + W + I + A ++ + + ++ L + Sbjct: 235 INAQGAREVAEKLVPSGSELESMWSNGAKAILSGAIEALQRERKTDWGWADLFKFVFKSP 294 Query: 313 IEKLRTYL--RNSPAANLVEEKI----EKTAISIRAVL-TNYVKAIRYLQGIEHNGE--P 363 ++LR L +SP+ +L+E +T +S+ L + IR L E + + Sbjct: 295 -KELRAALEAAHSPSVHLIEIDADGVANRTTLSLMLTLWVAALTTIRPLAQAEASNKECS 353 Query: 364 FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWF- 422 F++RDW+ + + + NA+ + + + + LL+ + W Sbjct: 354 FSVRDWLSEQSRLPRT--IILQHNAEYPLLSTAISGLLVDVVCGKLLSPSTPKRDCPWLH 411 Query: 423 -FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 DELP L +L ++L R+ G + Q + Q+ +Y AA+L + Sbjct: 412 LILDELPVLGRLEQFPKLLNVGREKGVAAIVATQDWEQILKLYQRYDAATLEARFKIKVV 471 Query: 482 FRSPSHKIAEFAA-GEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY---SDI 537 R + + E G + RD + ++ D Sbjct: 472 CRLGTSETRERVVGKYAGRRTIETW-------VATSRDKPEKIRHENEIDVIEPNYLDDE 524 Query: 538 QSLPDLTCYVTLP----GPYPAVKLSLKYQTRPKVAPEF 572 + + ++ + G + + K + Sbjct: 525 LGVRIVDGFLVVRALVFGLGNPAVVETPFTQWRKRREAY 563 >UniRef50_B0RB09 Putative conjugal trasnfer protein n=2 Tax=Clavibacter michiganensis subsp. sepedonicus RepID=B0RB09_CLAMS Length = 675 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 77/391 (19%), Positives = 151/391 (38%), Gaps = 33/391 (8%) Query: 186 QNFCLHGTVGAGKSEVIRRLANYARQ---RGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 ++ G +G GK+ I L R D++V++D G++ ++++ P I L Sbjct: 48 RHVLYLGGIGTGKTVGISALVASVRASMTADDVMVVFDTKGDYHETFHRPGDAVIAATLA 107 Query: 243 ---ARCAAWDLWKECLTQPDFDNTANTLIPMGTK----------EDPFWQGSGRTIFAEA 289 A +W+L++E P + + M + ++ ++ + R +F Sbjct: 108 DEFAGQVSWNLFEEFRALPPGRLPEDEIFEMCSGLFSRLIADAGDNAYFANAARDVFTAL 167 Query: 290 AYLM-RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANL--VEEKIEKTAI-SIRAVLT 345 M R RS + + + ++ L A+L I K S A + Sbjct: 168 VTAMYRESEERSNCDIRMIVGGMGTSEMHALLDRPENADLRGARHYIAKEGSNSTMATMA 227 Query: 346 NYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 + I+ + F+IR ++R + LF+ + + ++L PV + L + Sbjct: 228 FMQQVIQESFRSSFGRPGDFSIRAFLRA----KGARALFLEYDIASGSTLAPVFTTMLDV 283 Query: 405 AIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY 464 A++ ++ RV+F DE L +L L + + R G ++ G Q+ Q++++Y Sbjct: 284 AMKEAMSR-RRAGGRVFFVLDEFALLPELTHLSDGVNFGRSLGLRFIVGTQNVKQVQEMY 342 Query: 465 GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGK 524 G + AAS+ + FR F G L + G+ + Sbjct: 343 GPEMAASVLSAFGSVFAFRLYDGDSRRFVGDRFGANRKLTRFDASVRGSG-------LRE 395 Query: 525 DMERQTLVSYSDIQSLPDLTCYVTLPGPYPA 555 ++ +V D+ SL TC +P P Sbjct: 396 EVITGAVVEDWDLSSLGVGTCIAAIPDGPPV 426 >UniRef50_C5EJN7 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJN7_9FIRM Length = 539 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 84/490 (17%), Positives = 170/490 (34%), Gaps = 51/490 (10%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGG-------------RQLTDNPKDVARM 162 ++ LV+ T F WI+ +GKQ E + G +++ PK ++ Sbjct: 40 MIINLVLIAWTSFNNFWIVACEGKQLDEIHIGDGLVPETGLKKESPQKRIAMYPKVPPKL 99 Query: 163 LKKDGKD---SDIRIGDLPIIRDSEIQNFCLHGTVGAGKS--EVIRRLAN--YARQRGDM 215 L K+ + + + + +I ++C+ G G GKS ++ L + G Sbjct: 100 LSKEPEGIILGKYKNQYVRVPLK-DIYHYCILGGTGVGKSSGVLLNSLLANFAGGKNGFT 158 Query: 216 VVIYDRSGEFVK---SYYDPSIDKILNPLDARCAAWDLWKECLTQPD-------FDNTAN 265 D GE + ++P + +++P + WD++ P + + Sbjct: 159 SFSIDIKGELHEVSSPMFNPDV-IVVDPENRDSCGWDVYYRLHNHPSNDLILAAIEEISE 217 Query: 266 TLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKL-RTYLRNSP 324 LI +D F+ + +T S+ V+ +L L +++S Sbjct: 218 GLIVSTNSKDFFFVENAKTALTGLLVYYYMRGE-SFIDSVNRILESDTASLITEIIKDSE 276 Query: 325 AANLVEEKIEK----TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQ--K 378 ++L + + K TA S++ + T + L + F RD + + Sbjct: 277 PSDLWYKYLAKFNGKTAESVQDIFTEMCTS---LSVFSKDSVRFCFRDNYQKASPYSLLE 333 Query: 379 NGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVE 438 +F+S D + K ++ + + L + + + + DE + ++ + Sbjct: 334 GKSVFLSIKEDMLETYKAIMRLCTVQVFKELERRPKEQKKPILLIIDEFARIGEIKGVFN 393 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 L R + QS AQ E IYG+ A L D + K + + G Sbjct: 394 ALYTLRSRNVMVLLAFQSLAQAEQIYGDDGARILMDNCRVKVILECNDPKTQKAISDWCG 453 Query: 499 EKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP-DLTCYVTLPGPYPAVK 557 + E + G + + E + +V +D+ L + L G Sbjct: 454 --TYRDKKETLNGGKNRHK-----SYTYEDKPIVDANDLIKLAGKGEEILVLGGIGYLRT 506 Query: 558 LSLKYQTRPK 567 + Y K Sbjct: 507 IKCPYFRDEK 516 >UniRef50_C2W8G4 Type IV secretory pathway VirD4 component n=2 Tax=Bacillus RepID=C2W8G4_BACCE Length = 435 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 78/401 (19%), Positives = 144/401 (35%), Gaps = 36/401 (8%) Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDP 232 + + ++ G++G+GKS + + R++ D++V +D G++++ +Y P Sbjct: 41 GVCLHPSLFEKHILTLGSIGSGKSNTMYHIVKAVREKMLNDDVIVFFDAKGDYLEKFYCP 100 Query: 233 SIDKILNPLDA--RCAAWDLWKECLTQPD------FDNTANTLI--PMGTKEDPFWQGSG 282 I N L W+++ + + P A TL + + P + Sbjct: 101 GDLVISNSLTPPPGHTNWNIYNDIMYTPKEKREETIREIAGTLFKSEIEKSQSPVFGMGA 160 Query: 283 RTIFAEAAYLMRN-----DPNRSYSKLVDTLLSIKIEKLRTYLRNSPA----ANLVEEKI 333 R + + + KL + + S L + + E Sbjct: 161 RDLLSGILTVHIRQIEEGKETWDNHKLANFVRSADDVDLYNLFLPYEDLDWLRSYIAEDG 220 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 T S +LT Y + G F+IR+ + + +F+ + + Sbjct: 221 GATTQS--FLLTLYQTVMNVFNGTFGQPGDFSIRETII----KKGGKAIFLEYDLSSGNI 274 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 L+PV ++ L +A++ +L E R V+F DE P + KL + L R G + G Sbjct: 275 LEPVYTVLLDLAMKEVLGRTE-RTGNVYFVLDEFPLIPKLNYMDNALNFGRSLGVKVIAG 333 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 IQ+ AQ+E YGE S+ T FR K F + G + L + G Sbjct: 334 IQNIAQVEHRYGEAYGRSILSGFGTVFAFRLFDSKSRSFVSDRHGSVKKLINLVSTTQGK 393 Query: 514 DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP 554 T ++ ++ L C V+ P Sbjct: 394 G-------TQDLYIDAKVIEDWNLSDLKVGECIVSFAAGSP 427 >UniRef50_C2ZYM5 TraG/TraD n=2 Tax=Bacillus cereus RepID=C2ZYM5_BACCE Length = 622 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 111/632 (17%), Positives = 231/632 (36%), Gaps = 75/632 (11%) Query: 89 RMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG 148 Q++H ++ ++ + +VA++ ++ F+ + ++ ++ ++ E+ Sbjct: 12 SFYVTQMIHTDFLKELIDRNFEHIQTFIIVAVIHIVLLVFLSIKLFRKKQRKLADGELLS 71 Query: 149 -----GRQLTDNPK-----DVARMLKKDGKDSDIRIG-DLPIIRDSEIQNFCLHGTVGAG 197 Q T K R KKD S I I +L + ++ L G G+G Sbjct: 72 WKDLKAEQDTQEAKGSFHTRNQRSFKKDK--SGILISRNLKLSTKKSYEHVLLLGPTGSG 129 Query: 198 KS-EVIRRLANYARQRGDMVVIYDRSGEFVKS---------YYDPSIDKILNP-LDARCA 246 KS + + +++ D GE + Y I+ +P + Sbjct: 130 KSAQFFKPSLRTIDNT--SLIVTDPKGELHRDTKDFLEAKGYRVLHINFNTDPDEEVFSH 187 Query: 247 AWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVD 306 + L C ++++ E W +T+ +L R+ +S + + Sbjct: 188 NYSLLGNCTDDSSVRKIGDSILANTEGE---WGNLSKTLLLAFLFLERDMGEQSLNNVAR 244 Query: 307 TLLS--IKIEKLRTYLRNSPAANLVEEKIEKTA------ISIRAVLTNYVKAIRYLQGIE 358 + S +++L SP A L ++ KTA S+ A + + +K Y + + Sbjct: 245 NIGSFPDDLDELEAIFSASPEALLQFKQFRKTARGDGYVSSVYATIQSVMKVFEYDKVKQ 304 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL-------A 411 + + D+ G QK LF+S +P +S + I + + Sbjct: 305 VDSKS----DFSPGDLRTQKTA-LFLSYPTKDSKIYQPYLSSFYFQLISEIEAHPSMDES 359 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 + V F+ DE + +P E L R ++ G+QS AQL+ Y + + Sbjct: 360 KPGKKGYGVVFYMDEFANIGIIPSFAEFLTTVRSKNMSFILGVQSIAQLKANY-KDTFSI 418 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 L + TR H+ A+F + +GE+E+ S S +D VST + +++ + Sbjct: 419 LIENTKTRIALPGLIHETAKFFSDLVGEEEYNALSISSSAKSD-----VSTSESKQKKNV 473 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKL-------SLKYQ-TRPKVAPEFIPRDINPEMEN 583 +S I+ LP P + + L ++ P+FI + + Sbjct: 474 LSPDQIRRLPSNQLICVFNNLRPILDIVNYYYLDELDFKYKYEWKYPKFIATPLYKFLRK 533 Query: 584 RLSAVLAAREAEGRQMAS-LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVP 642 + E +++A+ E ++Q + P Sbjct: 534 ATPNGIQVEEERVKELAAKFKEKHEETKEKAHSISQKRISENP-----------EERKEA 582 Query: 643 AGGIEQELKMKPEEEMEQQLPPGISESGEVVD 674 +++E+++ EEE++ Q P + E+++ Sbjct: 583 QRIMKEEIQILKEEELKPQQPIKQQDQNEILN 614 >UniRef50_A4J2S8 TRAG family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2S8_DESRM Length = 682 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 93/497 (18%), Positives = 170/497 (34%), Gaps = 51/497 (10%) Query: 164 KKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDR 221 K +G+ + IG + I + + G GAGK+ V+ + + A G +VI D Sbjct: 181 KLNGRILRVIIGRMAI-----AAHTAIFGATGAGKTFGWVLPNIVSTAHD-GWSMVISDP 234 Query: 222 SGEFVKSY------YDPSID----------KILNPLDAR--CAAWDLWKECLTQPDFDNT 263 GE V Y+P I ILN D W+ E +F Sbjct: 235 KGELVAGKWNASGEYEPGIADWLKKQGYEIIILNFKDPSQGSHRWNPLFEAKDDAEFRQV 294 Query: 264 ANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR-----NDPNRSYSKLVDTLLSIKIEKLRT 318 +I KE+PF+ G +F L R D R ++ +LLS +EKL Sbjct: 295 CEAMILSAGKENPFFAGGESNLFTALMGLTRYGSFLKDEMRHMRTVL-SLLSWPVEKLDE 353 Query: 319 YLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG--EPFTIRDWMRGVRED 376 + + + + + N+ ++ + +G T + + Sbjct: 354 TFEKEYRSGQIPVYFYEKWRAAAGMFNNFATGVQSKVAVMTDGPLAALTAGHDINLLALS 413 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR----VWFFCDELPTLHK 432 +K LF T LKP+++ + + + L+ E N R V F DE + + Sbjct: 414 KKKTALFCILP--TIGDLKPLLTAFYYLLFKRLVEYAEANNNRLPIPVRFILDEFANIGR 471 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 +P+ + R G CY + IQ+ QL +YG A + + R R K A + Sbjct: 472 IPNFSNRISFDRGLGICYNYIIQNRTQLNSLYGSDVAETFLGNTDIRMALRVNDDKTAGY 531 Query: 493 AAGEIGEKEHLKASEQYSYG-ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 ++G + SE+ + + ++ L+ + T V +P Sbjct: 532 FTRQLGSADVWDISERKDVTWPWKRMEITKKTESKKKLDLLYPWQFYEMEFYTAVVRVPT 591 Query: 552 PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVV 611 P ++ + + E+ + A + + P E Sbjct: 592 CRPFYLDTVAFSDLKEF----------KELSREPKTITDFAPAVPNHVPTPAIPSAEEED 641 Query: 612 SGEDVTQAEQPQQPVSP 628 + ++ ++ P Sbjct: 642 EAPTPPKRQRKRKESHP 658 >UniRef50_Q8ZSH1 Alr7539 protein n=6 Tax=Nostocaceae RepID=Q8ZSH1_ANASP Length = 608 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 94/497 (18%), Positives = 167/497 (33%), Gaps = 44/497 (8%) Query: 164 KKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRS 222 K +G+ G +P+ + + G G+GKS I + A +G +V+YD Sbjct: 122 KYNGQKLPQGSGGVPVYIPDVQRGTAVIGAPGSGKSFSAINPMIYSAIDQGFGIVLYDFK 181 Query: 223 ---GEFVKSY-YDPSIDK-ILNP---LDARCAAWDLWKECLTQPDFDNTANTL-----IP 269 + SY D I P C D ++ A + + Sbjct: 182 YASQAKIASYAKSKGYDVHIFAPGFPESEVCNPIDFLRDSSDAETARQLATVINKNFRLL 241 Query: 270 MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIK-------IEKLRTYLRN 322 ED F+ +G + L + + + +LS + +L ++R Sbjct: 242 GNASEDAFFGPAGDQLTQAILMLTKEFGDHADIMTAAAILSSEKMVERLMAAELNPWIRI 301 Query: 323 SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWL 382 + EKT I + + T+ E ++ + Sbjct: 302 AFGQLFSSAGSEKTVAGIAGSASLMFTRFMARGTLGCFVGKTTL------PLEVKRKQMI 355 Query: 383 FISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPE 442 + + ++ P+++ L + + +A + + DELP++ LPDL L E Sbjct: 356 IFGLDRERRDAVSPLMTSILHMVVSRSIAKKRKEDGPLVVCLDELPSIF-LPDLFRWLNE 414 Query: 443 ARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 +R G C + G Q+ QLE IYG++ + ++ T+ F + A + +GE+E Sbjct: 415 SRSEGFCGILGWQNMGQLEKIYGKEISKAILGACGTKFVFNPGEEESARLFSAYLGEEEI 474 Query: 503 LKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP-------GPYPA 555 + S G S + + L + LP C P G P Sbjct: 475 KYKQKSRSTGGGKS--STSISEQERTRKLFEPAQFLKLPPGKCLFINPAYSNKNEGSVPL 532 Query: 556 VKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGED 615 LK PK N ++L LA + + + + V EV Sbjct: 533 ----LKNIKIPKQIIGLEQ--ENDANWDKLIKELARKSTQKKPTQEDLDLRVKEVARKFP 586 Query: 616 VTQAEQPQQPVSPAIND 632 + QA Q +P D Sbjct: 587 IPQAP-VQAGNAPLPVD 602 >UniRef50_Q7NIZ2 Glr2040 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NIZ2_GLOVI Length = 538 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 112/530 (21%), Positives = 188/530 (35%), Gaps = 55/530 (10%) Query: 138 GKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAG 197 G+ E R+ ++ K + + G+ I + + G G+G Sbjct: 35 GRWAGAKEREHARRTARRQQEQRAKNKVALQINPGGRGERVIPVPHAERGVLVMGQPGSG 94 Query: 198 KS-EVIRRLANYARQRGDMVVIYDRS--------------GEFVKSYYDPSIDK--ILNP 240 K+ I L A ++G +V+YD + + P + + + NP Sbjct: 95 KTYSAIDPLIRSALRQGFPLVLYDFKYPTQTRRLFAYARHLGYTVQVFAPGLPQSAVFNP 154 Query: 241 LDARCAAWDLWKECLTQ-PDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR 299 LD +A D E Q + N L ED F+ +G + AEA L Sbjct: 155 LDLLVSAED--SETARQLAEVLNRNFKLAQQKGGEDAFFGPAGDQL-AEAVLLTAKASPY 211 Query: 300 SYSKLVDTLLSIK--------IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 +V +LLS+ E L ++++ S L EKTA SI A + Sbjct: 212 PDLLMVQSLLSLDQLPQRLQTAEHLSSWVKASYGQFLSAASSEKTAASIVATASALFTRF 271 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 Q P I + G L + + + P+++ L + I+ Sbjct: 272 LKPQVARSFAGPSAIDFDLSG------KKLLVLGVDRTRRDVVLPLVATLLHMLIQ--FN 323 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 E R + DELPTL LP LV L E R+ G V G+Q+ AQLE YG++ A + Sbjct: 324 THERRTEPLVLALDELPTLF-LPALVNWLNENREDGLVSVLGLQNLAQLERTYGKETAQA 382 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 +F T+ F A++ + +G++ L+ S + G S + + + L Sbjct: 383 IFGACATKFLFNPGEKDSAQYISDMLGQESILQRSISRNTGKGGPSRTHSESE--KTRPL 440 Query: 532 VSYSDIQSLPDLTCYVTLP--GPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVL 589 + S + L C + P G + ++ R I ++ ++ + L Sbjct: 441 LEASGLLKLGQGHCILLNPEYGSGKESGVPMRLAVRLDPGEMAI-AELAEKLWSTQQPEL 499 Query: 590 AAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGV 639 P V E AEQ P++PA + Sbjct: 500 LTN-----------SPPVSAQSLAERQASAEQ-FLPLAPADASTVRSVPL 537 >UniRef50_D1KAH2 TraG protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1KAH2_9BACE Length = 554 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 89/503 (17%), Positives = 179/503 (35%), Gaps = 53/503 (10%) Query: 104 CSEQLWSAFVLAAVVALVICLITFFV---------VSWILGRQGKQQSENEVTGGRQLTD 154 L AF + A +A++ + + + + G + + + Sbjct: 16 MYLALIYAFPMLAALAVLPLGVVYLCFRAGEIGNGLFVLAVEAGAVYLFIKYKRKGKKEE 75 Query: 155 NPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIR-RLANYARQRG 213 PK+ + + +++G+ + + G G+GKSE I L + + G Sbjct: 76 APKNPNTAV-LRTEAGGVQLGN-------PFRGVFVLGAAGSGKSESIAVPLLSEFVRMG 127 Query: 214 DMVVIYD---------------RSGEFVKSYY----DPSIDKILNPLDARCAAWDLWKEC 254 V+YD G ++ +Y +P+ +NPL+ R + Sbjct: 128 FAGVVYDFKFPTLAKDVQSFLNAKGSVLRHFYLDFNNPAASYRVNPLNPRYLPNTSYARE 187 Query: 255 LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIK 312 Q N L+ K+ FW S + + ++ + ++ + S Sbjct: 188 YAQAIISN----LMKESIKKPDFWTRSATDLLTACIWYLKEERPDICDLPHVLAMITSND 243 Query: 313 IEKLRTYLRNSPAANL---VEEKIEKTAIS-IRAVLTNYVKAIRYLQGIEHNGEPFTIRD 368 L+T +N A + + +E+ A S + V+ AI + E F+ D Sbjct: 244 TALLKTLQKNVQTAQMTVSIYNAMERGADSQVSGVIGTLQGAIAQINTPELMFL-FSGDD 302 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELP 428 + V + Q L + S + P+ S+ +++A + M + + DE P Sbjct: 303 FSLDVNDPQNPIILTVGSYPTLTQTFAPLCSLVITVATKL---MNQPDKHPSFVLLDEAP 359 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 T+ +P++ + R V Q AQLED YG + A LF N+ + R S K Sbjct: 360 TVF-IPNIEVLPNTGRSNKIATVIMCQDIAQLEDGYGREKADVLFASCNSHFYGRVASSK 418 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCY-V 547 AE + + G+ + + + + ++ + ++ S+ +L + Sbjct: 419 TAEILSKQFGKADKVYITSNEGRNTRKFGKTFGRSETIQERDVIKPSEFLNLQVGEFAGL 478 Query: 548 TLPGPYPAVKLSLKYQTRPKVAP 570 + P + K RP+ A Sbjct: 479 AVESNKPTFRTRFKQAQRPQPAE 501 >UniRef50_D2LPL0 Type IV secretory pathway VirD4 protein-like protein n=5 Tax=Aciduliprofundum boonei T469 RepID=D2LPL0_9EURY Length = 602 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 84/419 (20%), Positives = 162/419 (38%), Gaps = 49/419 (11%) Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV-VIYDRSGEFVKSYYDPSIDKI 237 I+ + + G G+GK+E+I+++ Q+ D V VI+D G++ +++ I Sbjct: 169 IVIEKYNTGIMVVGAPGSGKTELIKQVIYQFPQKRDYVWVIFDPKGDYYEAFGTERD--I 226 Query: 238 LNPLDARCAAWDLWKEC---LTQPDFDNTANTLIPMG--TKEDPFWQGSGRTIFAEAAYL 292 ++ AW+++ E D A + P+ ED FW + + + + Sbjct: 227 TLSVNGSSYAWNIFWEIDPDRATTDVIEIAKEIFPIEERGGEDKFWVVTSQQLLSAFILT 286 Query: 293 MRNDPNRS--------------------YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK 332 ++ +D + + IE+ L N V E Sbjct: 287 FYRQALQTYTKYFSGKVDRERLKEFLPTNEDFMDFINQLTIEQAYNLLVNQEDLRSVAEY 346 Query: 333 IEKTAI-SIRAVLTNYVKAIR--YLQGIEH--NGEPFTIRDWMRGVREDQKNGWLFISSN 387 I A+ V +N+ I ++ +IRD++ E+ + LFI N Sbjct: 347 INPQAMKQASGVWSNFYSRINEIFIGDFYKTAGKRQMSIRDYI----ENPQGRKLFIEYN 402 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPE 442 +T ++ P+ + + AI+ A NR + +F DE + KL E++ Sbjct: 403 VETGEAVAPIFRLLVDRAIKYSFARENQYNRIGEPRKKYFVIDEFQLIPKLKRYQELVNF 462 Query: 443 ARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 R + + GIQS AQ+ + YG+ +A ++ R+ ++ IG+K+ Sbjct: 463 GRSYYITSIIGIQSIAQVIEKYGKDSANAVVAGHAYLFALRAYDSASSQLIRSRIGKKQV 522 Query: 503 LKASEQY--SYGADP-VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL 558 + Q+ G V D ST + +S ++++P C + P + V L Sbjct: 523 WQREPQHIQVQGRGVYVADKYSTTEYFP----ISEEHLRTMPVGQCIIVTPDGFREVNL 577 >UniRef50_B1L333 ATPase involved in conjugal plasmid transfer n=3 Tax=Clostridium botulinum RepID=B1L333_CLOBM Length = 648 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 79/465 (16%), Positives = 162/465 (34%), Gaps = 26/465 (5%) Query: 177 LPIIRDSEIQNFCLHGTVGAGKSEV-IRRLANYARQRGDMVVIYDRSGEFVKSYY----D 231 LP +N + G G GKS +R + Q +VI D GE ++ Sbjct: 154 LPFDTWKFNKNVAIFGAPGTGKSRFYLRTVVCQLVQNKKSIVITDPKGELMRDLKVFLES 213 Query: 232 PSIDK-ILNPLD-ARCAAWDLWKECLTQPDFDNTANTLI----PMGTKEDPFWQGSGRTI 285 D + N ++ W+ E + T+I P+G+K D FW+ + + Sbjct: 214 QGYDVKVFNLVNMKNSHRWNPLNEVADDLSAQVFSQTIIDNTKPVGSKGDEFWEKGEQNL 273 Query: 286 F-AEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRA 342 A Y++ P R+ ++ L ++++ P + ++ + + S Sbjct: 274 LKALTLYVIYELPESERNLREMYSLLAGKDVKEMDRLFSALPGDHPAKQPYKLFSQSADN 333 Query: 343 VLTNYVKAIRYLQGIEHNGEPFTI---RDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 V + + + + N + D + + I+S D ++ + Sbjct: 334 VRSGMIIGLGTRLQVFQNQLVQALTETSDIDLSAPAKKPCAYFCITS--DMTSTFDFLSG 391 Query: 400 MWLSIAIRGLLAMGENRNRR----VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 ++ S L+ + + + V+F DE P + +PD + + R G Q Sbjct: 392 LFFSFLFINLVNYADLHSGKCDPEVYFMLDEFPNIASIPDFQKKISTMRSRGVHCHVIFQ 451 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 + AQL++ Y + + +++ F AEF + +G +S S G + Sbjct: 452 NIAQLQNRYPNFGWSEIIGNCDSKLFLGCTDLLTAEFVSKLLGITTVEDSSNSKSGGLEG 511 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 + D ++ L++ +I P + L G P + Y+ P ++ F P Sbjct: 512 LFDFGKNTTRATKRNLLNPDEILQFPTDKEILMLKGQKPLILDKRSYEFHP-LSKNFKPI 570 Query: 576 DINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE 620 +I + + EP E++ + Sbjct: 571 EITDFEPEWSKGKDFSYHKK--SPIDDIEPISSINKDIENMIKDN 613 >UniRef50_Q2RLJ0 TRAG protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLJ0_MOOTA Length = 661 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 110/605 (18%), Positives = 201/605 (33%), Gaps = 72/605 (11%) Query: 21 MFSQI----------ANIMLYCLFIFF----WILVGLVLWIKISWQTFVNGCIYWWCTTL 66 MF++I I L+ L + F +L + +W+ W L Sbjct: 1 MFNKIFAGLTEKTGNNGIGLFLLAVGFITSLAVLYIIDVWLLGPVAAIFAAAYKWLAGGL 60 Query: 67 EGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLIT 126 G + + + Q+ T R L + ++A + AL Sbjct: 61 HGHPNYTAA--WWYFQHPVATARAWLGGHLSQPEVRSWW--FGLNVLIAVMWALRRIAWQ 116 Query: 127 FFVVSWILGRQ-GKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL-------- 177 F W + + G + +++ T G D+AR+ G I +G L Sbjct: 117 F---DWTISKNPGIKIKKDDATYGSARWAVKSDLARVCDF-GFGPGIVLGALGAAPVRIP 172 Query: 178 PIIRDSEIQNFCLHGTVGAGKSEV-IRRLANYARQRGDMVVIYDRSGEFVKSY--YDPSI 234 P + ++ + G G+GKS +R A + G+ V++ D GE +S + S Sbjct: 173 PKPKTWMNRHVLVVGAPGSGKSRGYVRPNIFAAVRSGESVLVTDPKGELYRSMACWLKSK 232 Query: 235 DKILNPLD----ARCAAWDLWKECLTQPDFDNTANTLIP-----MGTKEDPFWQGSGRTI 285 + + + W+ E T D D A +I D FW + + + Sbjct: 233 GYTVKGFNLVQMGQSDHWNPLAEIRTPLDADVFAQVVINTTETGPKKGGDAFWDRAEQNL 292 Query: 286 FAEAAYLMRND---PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTA----- 337 A + + R++ L D L + E++ P + + A Sbjct: 293 LKALALYVTTELPADKRNFGSLYDILAAGDFEQVDALFAKLPPGHPAKGPYNVYAMAGDN 352 Query: 338 --ISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 + L ++ + G+ D + K + I+ DTH + Sbjct: 353 VKGGVVIGLGTRLQVFQQEMVRRITGD----SDIDLTLPGKGKCAYFIIT--PDTHGAFD 406 Query: 396 PVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 + S+ + L+ + + +V F DE + +P+ + + R G Sbjct: 407 FLASLLFTFLFVRLVEVADTSPNGRLPVQVRFLLDEFANIVSIPEFEKKIATVRSRGLDC 466 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 +QS QLE YG + +T+ A + + +GE S Sbjct: 467 HVIVQSIPQLERKYGR-TWEEIMACCDTKLIIGVKDDTTARYVSRMLGESTVETRSSTRE 525 Query: 511 ----YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS-LKYQTR 565 +G D S G + + L++ +IQ + C V LP P KL L Y+ Sbjct: 526 VNPIWGQGLFDDKRSLG--ITGRELMTPDEIQKMRSKFCLVFLPDGTPPAKLKVLDYEQF 583 Query: 566 PKVAP 570 P+ Sbjct: 584 PEAKE 588 >UniRef50_B4WW43 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW43_9SYNE Length = 259 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 129/269 (47%), Gaps = 11/269 (4%) Query: 308 LLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIR 367 + ++L+ ++ + + + E+ S+ A + NY IR+ + ++ +PF+ Sbjct: 2 ISRYSHDELKAFVSGGLSTRIFDG--ERMTASVLATMVNY---IRFYRDMDDGAQPFSFS 56 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDEL 427 W + + WLF+ D KP++S +A+RG+L+ ENR + DEL Sbjct: 57 QWAKHDNPE----WLFLPIFEDDAEKYKPMVSAAFEMALRGMLS-NENRWMKTAIVIDEL 111 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSH 487 L+KL L + E+RKFGG + G Q+ AQ++ +YG+ + T+ Sbjct: 112 GALNKLGSLNRLTVESRKFGGTLILGTQTDAQIDKVYGQYDTRIILQGTATKLILNCRDE 171 Query: 488 KIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 + AE A IG++E + + ++G R G S +++ LV S++Q+LP L Y+ Sbjct: 172 QTAERFAKTIGKQERIDWMKG-THGGWIFRHGYSKTENLRETYLVLPSELQALPKLEGYL 230 Query: 548 TLPGPYPAVKLSLKYQTRPKVAPEFIPRD 576 T+ P ++ ++ + + A F+ + Sbjct: 231 TIADGTPPARVKVEPKGYLQRAGRFVLKH 259 >UniRef50_A6NS50 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS50_9BACE Length = 448 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 86/422 (20%), Positives = 151/422 (35%), Gaps = 51/422 (12%) Query: 178 PIIRDSE--IQNFCLHGTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDP 232 PI D E +NF G G GK+ I L + D+ V++D +F +Y P Sbjct: 38 PIQLDEELLSRNFLFLGCSGTGKTNAILLLLDRLFSTMGPEDVAVVFDAKRDFFNRFYTP 97 Query: 233 SI-DKILN---PLDARCAAWDLW---------KECLTQPDFDNTANTLIPMGTKEDPFWQ 279 D +L+ L W+L+ +E L Q +NT G+ + PF+ Sbjct: 98 ERGDLVLSGSPALRDVTVNWNLFPELTAGGLDEELLIQSINENTKALFAGRGSTQQPFFV 157 Query: 280 GSGRTIFAEAAYLM------------RNDPNRSYSKLVDTLLSIKIEKL-RTYLRNSPAA 326 + R+I M R NR+ + D + + +L +Y Sbjct: 158 NAARSIAGSWLLAMLRSAKADPAFGDRECNNRTLRRYFDQAGAKQYSELAASYPDLGGIT 217 Query: 327 NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISS 386 + + A+ + L++ V+ + QG+ F+IR ++R + L+I Sbjct: 218 KYLGDGKNLQALGVMGELSSMVQEL--FQGVFAQKGDFSIRQFIRQ----KGGRVLYIEY 271 Query: 387 NADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKF 446 + +L P+ S+ + A + L+ + V+ DEL L L L + + R Sbjct: 272 DLAVGEALAPIYSLLMDQAFKEALSQERTKGN-VYLVVDELKLLPYLQHLDDTVNLGRSM 330 Query: 447 GGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS 506 G + +QS +QL +YGE ++ + FR +F G L+ Sbjct: 331 GVKVIASLQSLSQLYALYGEHKGRAIATGFASLFAFRPNDAVSRDFVREHFGRNVVLE-- 388 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 + S + V D+ +L V L P S + P Sbjct: 389 --------QLLGSRSPAPERREGWAVEDWDLSALNKGDAVVGLAEAPP---FSFHFDRFP 437 Query: 567 KV 568 + Sbjct: 438 ER 439 >UniRef50_UPI00019793E0 cag island protein,DNA transfer protein (virD4-like) n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019793E0 Length = 681 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 79/392 (20%), Positives = 159/392 (40%), Gaps = 44/392 (11%) Query: 313 IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMR 371 IE L +RN A ++ SI++ + Q + N F D Sbjct: 251 IETLDEVVRNYARA--WANAADEEFSSIKSTFNRVMSVFASYQVRDATNAMSFEYDDLRS 308 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR-NRRVWFFCDELPTL 430 KN L+I +LK +I + L + L+ R + R++ DE Sbjct: 309 ------KNITLYIKIAQTDIDTLKSLIRVLLESIAKNLMTKESKRLDERIYLVLDEFIRF 362 Query: 431 HKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIA 490 K+P L+E+ R +G ++ QSY ++ YGE ++ D + + F+ A Sbjct: 363 GKMPFLLEMPALCRSYGIVPLYITQSYGLIKKYYGEDDLKTMTDTIAFQILFKMNDADSA 422 Query: 491 EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP 550 E + +IG+ + + + +S + G ++ +E L++ DI ++P+ + + Sbjct: 423 ENVSKQIGK--YTREARSHSTKDGAIAFGGTSSYSLEGTELITAQDILNIPNDEIIILVS 480 Query: 551 GPY-PAVKLSLKYQTRPKVAP-----EFIPRDINP-EMENRLSAVLAAREAEGRQMASLF 603 G +K+ Y + K + +F P + P E+EN+ + ++ +E + Sbjct: 481 GHKAKPIKIKAAYYFKEKDSLRKLNWKFDPTNGKPIEIENKQTQIIDMKETPQEAQPT-- 538 Query: 604 EPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLP 663 P P+ + Q +Q Q+ P I++++ +Q++K EE+ + Sbjct: 539 -PPNPQAIQNTQEPQ-QQAQESQEPQISEQE------------QQDIKQAQEEQALYEYE 584 Query: 664 PGISESGEVVDMAAYEAWQQENHPDIQQQMQR 695 + E EA + ++ D+Q++MQ Sbjct: 585 KALQEQ---------EALKDKSQEDLQKEMQS 607 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 27/167 (16%) Query: 189 CLHGTVGAGKS--EVIRRLANYARQRGDMVVIYDRSGE-------FVKSYYDPSIDKILN 239 + GAGKS I L N V+ D GE + + ++ I I N Sbjct: 44 LIVAPPGAGKSAAVAIPNLLNLPTS----CVVLDIKGELCDLTAGYRQKAFNNEI-YIFN 98 Query: 240 PL-DARCAAWDLW-KECLTQPDF-------DNTANTLIPMGTKEDPFWQGSGRTIFAEAA 290 PL ++ + + + + DF D ANT+ DP W R +F Sbjct: 99 PLGKDNNLKFNPFDNKIVKKLDFNAKKRLVDEIANTIFVEEQGSDPHWIAKARELF--TF 156 Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRN-SPAANLVEEKIEKT 336 Y + + ++ S D + + ++ + + SP + + + EKT Sbjct: 157 YALYDLCTKNESNFFD-IATAPVKDYKPLIEEKSPYYSKLWDFNEKT 202 >UniRef50_A6UMU5 TRAG family protein n=5 Tax=Rhizobiales RepID=A6UMU5_SINMW Length = 699 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 99/570 (17%), Positives = 212/570 (37%), Gaps = 48/570 (8%) Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWS-----AFVLAAVVALVICLITFFVVSWILG 135 +Q + + R+ + + + +Q W A A+ +++ L+ +V Sbjct: 29 LQLFYRDGRILETTITSNPF--APIQQFWHYKTSPALQKVALGSMLPALLAAGLV----A 82 Query: 136 RQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVG 195 G + + + + + +K G R+G I+R + ++ + G Sbjct: 83 CIGLKPTSSPLGDAAFQDLASLRRRKWFRKQGHIFG-RVGR-NILRTKDDRHHLIIGPTR 140 Query: 196 AGKSEVIRRLANYARQRGDMVVIYDRSGEFVK-----SYYDPSIDKILNPLDARCAAWDL 250 +GK + A +++ D GE K + S + P + +++ Sbjct: 141 SGKGAG--YVIPNALMHEGSMIVTDLKGEVFKATAGYRRQNGSQVFLFAPGSEKTNSYNP 198 Query: 251 WK-----ECLTQPDFDNTANTLIPMGT-KEDPFWQGSGRTIFAEAAYLMRNDP---NRSY 301 D N A+ L+P T E+ WQ + + + A + P +R Sbjct: 199 LDFIRPERGNRTTDIQNIASILVPENTESENSVWQATAQQVLAGVISYITESPFYKDRRN 258 Query: 302 SKLVDTLLS--IKIEKLRTYLRNSP---AANLVEEKIEKTAISIRAV---LTNYVKAIRY 353 V++ + + ++ L Y++ + VE A+S RA L + KA+R Sbjct: 259 LAEVNSFFNSGVDLQALMKYIKEKEPYLSKFTVESFNSYVALSERAAASALLDIQKAMRP 318 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 + E + D M ++ ++++ N L+P++++++ + L Sbjct: 319 FKN-ERIVAATNVTD-MDLRAMKRRPISIYLAPNITDITLLRPLLTLFVQQVMNILTLEH 376 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 + + V+F DE L ++ +++ LP + F IQ L++IYGE + SL Sbjct: 377 DPNSLPVYFLLDEFRQLKRMDEIMTKLPYVAGYNIKLAFIIQDLKNLDEIYGETSRHSLL 436 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY--GADPVRDGVSTGKDMERQTL 531 + + AE+ + +G++ SE + P R V + + + L Sbjct: 437 GNCGYQLVLGANDQATAEYVSRALGKRTIRYQSESRTIELMGLPRRTKV---EQIRERDL 493 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLK-YQTRP-KVAPEFIPRDIN--PEMENRLSA 587 + +++ +P+ + + G P L+ +QT+P K A F +I PE++ Sbjct: 494 MMPQEVRQMPENKMILLIEGQRPIFGEKLRFFQTQPFKSAEAFSQANIPQVPEVDYLSPK 553 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGEDVT 617 + A E + E+ Sbjct: 554 PVPATTPEYASGGDPSVEIPSPAPAKEEKP 583 >UniRef50_B5Z5X5 TrsK protein n=3 Tax=Bacillus cereus group RepID=B5Z5X5_BACCE Length = 560 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 92/498 (18%), Positives = 181/498 (36%), Gaps = 55/498 (11%) Query: 238 LNPLDARCAAWDLWKECLTQPDFDNTANTLIPMG---TKEDPFWQGSGRTIFAEAAYLMR 294 ++ ++ A++ + A T+ KED F+ + + Y Sbjct: 19 IDFINFESNAYNPLDYVKDDQEALQLAKTISKNSKKDDKEDYFFNTAKDLLAGLIIYCKS 78 Query: 295 NDPNRSYSKLVDTLL---SIKIEKLRTYL----RNSPAANLVEEKI---EKTAISIRAVL 344 +PN + K V S LR + PA NL+++ KT SI + Sbjct: 79 ENPNANIPKDVKREFYRVSDDENYLRELCDAIGEDHPAYNLLKDASIAEGKTRTSILSSF 138 Query: 345 TNYVKAIRYLQGIEH--NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 I LQ + F R++ + L+I D P+ + + Sbjct: 139 AQ-QTGIFSLQKVARMTTHSDFNFREFQKE------KSILYIKIRMDE-NPFTPLTATFF 190 Query: 403 SIAIRGLLAMGENRNRRV----WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 I + + + ++ F DE + K+ +L R G + IQ A Sbjct: 191 DQLITVFYDIADRNDSKLPIPSIFLLDEFANIGKIEKYGRVLSTCRGLGMSMITIIQDNA 250 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS----YGAD 514 QLE++YG++ A ++ + + F R+ + A++ + GE SE S + Sbjct: 251 QLENLYGKEVARTIINNHDFTLFLRTKDPETAKYYSNLAGETTVRMTSESLSSPSGMFSG 310 Query: 515 PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 S + ++ L++ ++ ++ CYV + G YP L LK + + +F+ Sbjct: 311 KSSSSKSVQEQYVKRPLITEGELINIDKQDCYVFISGYYP---LKLKKAWQFVIYKDFLK 367 Query: 575 RDINPEMENRLSAVLAAREAEGRQMASL-FEPDVPEVVSGEDVTQAEQPQQPVSPAINDK 633 E R ++ + + ++ E DV + E + Q +PQ DK Sbjct: 368 N--YDEYRERYRSLFNHNDKKVEELTDNELEKDVKVNLQKEKIVQEPEPQM-------DK 418 Query: 634 KSDSGVNV----PAGGIEQELKMKPE-EEMEQQLPPGISESGEVVDMAAYEAWQQENHPD 688 K + +N+ A + ++ E++ + G + + E + N Sbjct: 419 KEEVELNIHEENEADNLNDDINTPQSIEKLARDYLDG---KFTLNEYLPREKIESINMTL 475 Query: 689 IQQQMQRREEVNINVHRE 706 +++ RE V+ +V E Sbjct: 476 FEEE---REYVDYSVELE 490 >UniRef50_B9MP28 TRAG family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP28_ANATD Length = 625 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 91/545 (16%), Positives = 180/545 (33%), Gaps = 41/545 (7%) Query: 59 IYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVV 118 Y L GM SQ +E GK+ ++ V+ + S VL + Sbjct: 14 YYLIMAYLIGMFSGAISQDAWEQIMAGKSPKI----VIQTDPVAALGSVFHSPAVLRIWL 69 Query: 119 ALVICLITFFVVSWILGRQ------GKQQSENEV-TGGRQLTDNPKDVARMLKKDGKDSD 171 + L+ V R GK+ +E T G + ++ K + Sbjct: 70 GVATVLLVVAGVFIFAYRDELKIHFGKEVPADERNTYGSADWMKQSEAKKVFKFGSEQKG 129 Query: 172 IRIGDLP-----IIRDSEI-QNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVIYDRSGE 224 I +G + + D++ ++ + G G GKS R + G +++ D GE Sbjct: 130 ILLGKVKGQRVVLPADTKYNKHIAIFGAPGTGKSRTFARPNIVQIAKMGQSMIVTDPKGE 189 Query: 225 FVKSYY----DPSIDK-ILNPLDARCA-AWDLWKECLTQPDFDNTANTLIPMGT------ 272 + D LN ++ C+ W+ D A+ +I Sbjct: 190 LFEDMSVWLEKQGYDVKALNLVNIECSDRWNPLDAVADDMDATVFADVVIRNTQAGMRKA 249 Query: 273 KEDPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV 329 DPFW + + ++ ++ +L L + + L++ N P Sbjct: 250 GGDPFWDRAELNLLKALVLYIKETRPAQGQNLGELYRLLATTNMAGLQSMFMNIPNDRAS 309 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD--WMRGVREDQKNGWLFISSN 387 + A + V T + + + N + + + ++ F + Sbjct: 310 KMAYNIFAQASEQVRTGVIIGLGTRLQVFQNRLVQKMTEVSDIDLEAPKRRKVAYFCIIS 369 Query: 388 ADTHASLKPVISMWLSIAIRGL-----LAMGENRNRRVWFFCDELPTLHKLPDLVEILPE 442 A + + I+ + E R R V+F DE P + ++PD E + Sbjct: 370 DTHRAFSFLSSLFFSFLFIKLVNLHDTTTDPEIRAREVYFLLDEFPNIGEIPDFQEKIAT 429 Query: 443 ARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 R QS QLE IY ++ +T+ F + K AE+ + +G K Sbjct: 430 IRSRRLHCSIIFQSLGQLEKIY-PLDWENIIGCCDTKFFLGANDLKTAEYVSELLGTKSI 488 Query: 503 LKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 S G + + + + + ++ L++ ++ + V + G P + + Sbjct: 489 HTRSVSRQGGLEGLTEIERITQSVGKRQLLTQDEVLRFENEKAIVMVRGHKPLIVEKVDI 548 Query: 563 QTRPK 567 + Sbjct: 549 SELKE 553 >UniRef50_A4XMT9 TRAG family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMT9_CALS8 Length = 628 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 107/649 (16%), Positives = 218/649 (33%), Gaps = 68/649 (10%) Query: 30 LYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFR 89 F++L G ++ + + + + + + I++ P+ Sbjct: 8 FVAAVALFYLLTGYIIGMLTDFLKMNQESFF--FSPEKAQQIKIQTDPIKA--------- 56 Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGG 149 L + + ++ W F ++A ++ L+ + +L G Q +++ G Sbjct: 57 ------LKNVFANPDIQKAWLGFTTFILIAGILMLLPYKERMKLL--FGNQAAKD--PRG 106 Query: 150 RQLTDNPKDVARMLKKDGKDSDIRIGD------LPIIRDS-EIQNFCLHGTVGAGK--SE 200 T + K G + I + + S ++ + G GAGK + Sbjct: 107 TYGTSDWMTEKEARKVLGFNKPGLILGKISNELVTLPFSSRFNKHVMVLGATGAGKSRTF 166 Query: 201 VIRRLANYARQRGDMVVIYDRSGEFVKSYYD-----PSIDKILNPLDAR-CAAWDLWKEC 254 +I + A G +VI D SGE ++ Y K LN +D W+L Sbjct: 167 IIPNVIALAEA-GHSMVITDPSGEILEHTYKYLLKKGYFVKALNLVDFTLSDPWNLLDSI 225 Query: 255 LTQPDFDNTANTLIPMGT----KEDPFWQGSGRTIFAEAAYLMRNDPN------RSYSKL 304 + D A+ +I DPFW + + +++ ++ +K+ Sbjct: 226 ENEEDAQVFADIVIKNTEAGRKSGDPFWDRAELNLLKALVLYVKDKDGYVPVEKQNMAKV 285 Query: 305 VDTLLSIKIEKLRTYLRNSP-------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 D L S + N P A NL + EK + L ++ + Sbjct: 286 YDLLASKDPAMIAKLFENLPDDKAAKMAYNLYSQVNEKVKSGVVMGLGTRLQLFQNKLVR 345 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN-- 415 + + + QK + I D H++ + S++ S L+ + + Sbjct: 346 RIT----SYSEIDLLAPKLQKTAYFCII--PDQHSAYNFMSSLFFSFLFIKLVKLHDTTD 399 Query: 416 ----RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 RNR V+F DE + ++PD + + RK IQS QLED Y Sbjct: 400 NKDIRNRHVYFLLDEFCNIGEIPDFTKKISTIRKRNLHCQIVIQSIPQLEDRYPGGQWKE 459 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 + +T AE+ + +G K S + + + + + + ++ L Sbjct: 460 IIGNCDTFLCLGVNDPDTAEYVSTLLGIKSIQTRSTSHPGDFNAIFETERITQSVGKRLL 519 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP-EFIPRDINPEMENRLSAVLA 590 ++ +++ V L G P + + + + EFI + E S Sbjct: 520 LNPDEVKKFDADKNIVLLRGKNPLITEKVFFDRMKQAKELEFISLANYKQKELSSSQTPE 579 Query: 591 AREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGV 639 + +++ F + E Q+ + ++ DS + Sbjct: 580 QSYYQQQKLQQEFSCEAQAKEQKEKEQAV-AAQEAKALPEEAQEEDSEL 627 >UniRef50_B7KLU0 Transfer complex protein TrsK-like protein n=3 Tax=Cyanobacteria RepID=B7KLU0_CYAP7 Length = 638 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 96/520 (18%), Positives = 181/520 (34%), Gaps = 50/520 (9%) Query: 162 MLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYD 220 K+ + D+ + + G G+GK+ VI L A +G +IYD Sbjct: 109 FCKRKPSPKPFYVPDV-------QRGVSVLGGAGSGKTFSVIDPLIRSALDQGFPTIIYD 161 Query: 221 RS------GEFVKSYYDPSIDKILNP---LDARCAAWDLWKECLTQPDFDNTANTL---- 267 + ++ P C K+ A+T+ Sbjct: 162 FKYPAQTSRAVAYALKRGYKIRVFAPGFEESDSCNILSFLKDAEDAVAAGQLAHTITKNC 221 Query: 268 -IPMGTKEDPFWQGSGRTIFAEAAYLMR---NDPNRSYSKLVDTLLSIKIEKLRTYLRNS 323 + G K D F++ +G T+ L + + Y+ L+ + + + KL L ++ Sbjct: 222 DLGNGGKGDKFFEDAGATLVEGVFLLTKAIAQMRGKQYADLMTSSAILSLPKLGLRLLHA 281 Query: 324 PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM-------RGVRED 376 N + I +V + + + + F RD++ + Sbjct: 282 QQQNKFPIWTMRPLDQIMSVSGSSETESSIVGTAQRTFQKFIKRDYIGAFCGKSTLPLDL 341 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDL 436 + + + + P+++ L + + ++ E R + F DELPT+ LP L Sbjct: 342 DGKTLIIFGLDRNNRDIVGPLLAATLHMVVSRNVSRIEPRKDPLCVFLDELPTIF-LPQL 400 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 EAR+ G C V Q+ QLE IYG++ A +F + F + A++ + Sbjct: 401 QNWFNEAREDGFCGVIAAQNLGQLERIYGKELARIIFGGTACKFLFNPQDPESAKYFSEF 460 Query: 497 IGEKEHLKASEQYSYGADPVRDGV--STGKDMERQTLVSYSDIQSLPDLTCYVTLP---- 550 +G+ E S+ S DG ST + +++ L + L V P Sbjct: 461 LGDVEVKYDSKSRSKNTGKHGDGGSRSTSDNRQKRPLFEPAQFLKLSTGKAVVINPAYSR 520 Query: 551 GPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEV 610 G V + K + + R EME ++ R A S + D+ Sbjct: 521 GDEDYVPIKQKIR---------VARCEIQEMEWSVARWPKIRAALKNDRKSNIDDDIRRK 571 Query: 611 VSGEDVTQAEQ--PQQPVSPAINDKKSDSGVNVPAGGIEQ 648 E + + P+ P + + ++ K + N E+ Sbjct: 572 QFEERLALVNELFPEPPNNDSNSNGKGGNQSNQKQTTKEE 611 >UniRef50_B4WV81 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WV81_9SYNE Length = 616 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 108/614 (17%), Positives = 213/614 (34%), Gaps = 74/614 (12%) Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS-----DIR 173 A + L+ R + ++ GR + K AR L K +++ +R Sbjct: 27 AATLMLMMALAGGLSFARIATAPKKQKLGTGRFASRAEKARARQLAKKQRNTGGLEMSLR 86 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRR--LANYARQRGDMVVIYDRSGE----FVK 227 +GD+ I +E + G G+GKS + L RG +++D G + Sbjct: 87 LGDVAIPYANE--SVLFVGAPGSGKSATVGDPGLME-IIDRGLPAIVFDAKGSREDSITR 143 Query: 228 SY--------YD-----PSIDK--ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGT 272 + Y+ P D LNPL+ + D + + P + Sbjct: 144 RFAPLAGRAGYNVGVIAPGKDYSDCLNPLEFIRSPIDASRSLHLANILEKNTAGFNPNKS 203 Query: 273 KEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNS--------- 323 + F+Q +G I L + P + + + + L S Sbjct: 204 GQGDFFQRTGIGIVQAGIMLSKLLPQSDLMTVSEIINRPDLVGRIKGLMESGNAPAWTLK 263 Query: 324 -PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWL 382 + E+ EK + + + + + P T+ + L Sbjct: 264 QFGQMVSSEESEKQLVGMIVTAQSIFERFITADLVPSFCGPSTV------PLKMDGKQIL 317 Query: 383 FISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPE 442 F+ + +T ++ P+I+ + + I + E R + F DELP L+ LP + + + Sbjct: 318 FLQVDEETQDAVLPLIAAMIELLIAHNFS--EPRKNILGLFLDELPLLY-LPKIAQYVNL 374 Query: 443 ARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 R G G+QS +Q+ + YG+ A S+ FF + A+ + IGE + Sbjct: 375 LRSAGLVAFLGVQSLSQMRETYGKDMATSIMTGCRNTLFFNPNNVDTAKEVSARIGECDR 434 Query: 503 LKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAV--KLSL 560 + + S + + + ++ L+S +I + PG + S+ Sbjct: 435 IHHTWSRS---GALLIKPTRNQHRQKGPLLSPDEINRFGKGKFVMFAPGYQTQAGEQASI 491 Query: 561 KYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE 620 RPK+ I + + R E R+ + + DV + + + + E Sbjct: 492 PILARPKLNHAHIKQ--QAIAGQVWDSKSQQRLTERRKQDADYISDVEQAL----LERRE 545 Query: 621 QPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEA 680 Q + + P ++ ++D+ + EE E+ EV++ A +A Sbjct: 546 QVEVLLPPVTDETEADATEREAQPTAD-----AVAEEA--------VEAKEVIEEIAAKA 592 Query: 681 WQQ--ENHPDIQQQ 692 E+ D + Sbjct: 593 PAPATEDVDDARMN 606 >UniRef50_A6GWX0 Putative mobilization protein, TraG family n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6GWX0_FLAPJ Length = 645 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 81/423 (19%), Positives = 160/423 (37%), Gaps = 47/423 (11%) Query: 185 IQNFCLHGTVGAGKSEVIRR-LANYARQRGDMVVIYDRSG-EFVK--------------- 227 + + G G+GKS I + ++ ++YD E Sbjct: 209 YRGIYIQGGAGSGKSASIFEPIITQCGEKQFTGMLYDFKSPELTNLVYLSYQNTNVKVKN 268 Query: 228 -SYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIF 286 + P + +NP+D L K + N L+P K+ FW + + I Sbjct: 269 VDFKQPLLSDRVNPIDPNY----LGKSAIAMEYAQVILNNLLPESIKKPDFWISNAKMIL 324 Query: 287 AEAAYLMRNDPNR--SYSKLVDTLLSIKIEKL-----RTYLRNSPAANL---VEEKIEKT 336 A + +R + + + + +L +I+ L + Y A+L +E E+T Sbjct: 325 AGVIWYLRKEHPKYCTLPHAISLILHSQIDVLIEKISQDYEAGGMVASLRESIERGAERT 384 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 + + L N + + + D + + +L + +++ + P Sbjct: 385 VAGMLSTLQNALSGLNSHDIFW----ILSANDVDLHLNNKENPTFLCLGNDSTLPTTYTP 440 Query: 397 VISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 IS+ +S+A+R M + ++ DE PT+ +P++ +I AR +FG+Q Sbjct: 441 AISLIISVALRQ---MNQPHQQKSVVLLDEAPTIF-IPNIEQIPATARSNKIATIFGVQD 496 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD-- 514 +AQL D YG + A + + + F R + K AE +K+ + S+ G Sbjct: 497 FAQLADKYGNEKAQVIISNLGNQFFGRITNGKTAEMVQNLFSKKDEIFISKNDGTGTSGQ 556 Query: 515 ----PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 T + ++ + V SD+ +L Y + P L ++ + K+ Sbjct: 557 FVHLGSNTNAGTSEAVQERDRVKISDLVNLCQGEFYGIIAEGTPREFLKTQFL-QAKIKG 615 Query: 571 EFI 573 E+I Sbjct: 616 EYI 618 >UniRef50_A4IU07 TrsK n=4 Tax=Geobacillus RepID=A4IU07_GEOTN Length = 711 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 90/521 (17%), Positives = 183/521 (35%), Gaps = 62/521 (11%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITF----------FVVSWILGRQGKQQSENEVTGG 149 ++ E L + F LA V L L TF + + L + + +EV G Sbjct: 50 TFVYTEENLKTVFSLAPFVILAALLYTFRSSIIVPKLEYASDFGLHGTSRWGTPDEVIDG 109 Query: 150 RQLTDNPKDVARMLKKDGKDSDIRIGDLP-------IIRDS--EIQNFCLHGTVGAGKSE 200 + + N + + I +G +P I R++ + +N + G+ G+GK + Sbjct: 110 KMFSKNNSYTKDPVDAFQMEKGIIVGKVPKKRELLIIPRNTTIDNRNVLVIGSSGSGKGQ 169 Query: 201 VIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSID--------KILNPLDARCAAWDLWK 252 N + +++ D GE ++ + D +N ++ C ++ Sbjct: 170 SFV-FPNMINHTEETIIVTDPKGEIYEATHQIKRDQGYKVYQVDFINFVN--CDRYNPLD 226 Query: 253 ECLTQPDFDNTANTLIPMG--TKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTL 308 D ANT+ + FW S + ++ + +V+ + Sbjct: 227 YVEDDEDARAIANTIASNSVDEGKRDFWSESAVAFLSAFILYVKEKYKDKANMRHVVEMV 286 Query: 309 LSI--KIEKLRTYLRN----SPAANLV---EEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 E L ++N PA ++ T I A L + + + Sbjct: 287 ARAGKDEEYLDEIIKNMSPDHPAYHMFTLANMSSGNTRAGIMATLAQQISIFAMQKIAKM 346 Query: 360 NGE-PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR 418 + F D + L+I D + + + I L + + + Sbjct: 347 TAKSDFKFHDLQKE------KSVLYIKIRMDE-NPFVQLTATFFEQLIAVLYDIADKNHS 399 Query: 419 RV----WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE--DIYGEKAAASL 472 ++ F DE + + +L R G + IQ QLE YG + A S+ Sbjct: 400 KLPIPTIFLLDEFANIGTINKYPRVLATCRGLGMAMMTIIQDIGQLEDKKRYGPEMARSI 459 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 + +T+ F R+ K A++ + GE + SYG S + +++L+ Sbjct: 460 INNHDTQLFLRTKDTKTAKYFSELAGETTVKHKQKSASYGRKE--GSKSISEQYVKRSLI 517 Query: 533 SYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 + ++ ++ TCY+ + G YP + L+ + + + + Sbjct: 518 TPGELMNMDKNTCYLFVSGAYP---MKLEKAWQFDIYGDLL 555 >UniRef50_A8SY67 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SY67_9FIRM Length = 437 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 152/447 (34%), Gaps = 55/447 (12%) Query: 140 QQSENEVTGGRQLTDNPKDVARMLKKDG----KDSDIRIGDLPIIRDSEIQNFCLHGTVG 195 QS + G L ++P ++K G ++ D ++ L G G Sbjct: 4 GQSVRRILGTSGLQESPTYDDPLIKISGIGIADTGPTGFANMEFTADHLVKGTALIGATG 63 Query: 196 AGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDPSIDKI---LNPLDARCAAWD 249 +GKS + ++ R ++I +F P I +N R W Sbjct: 64 SGKSYCLSKMIKDLRYNMIEDYSMIIIQAKNDFNSLM-KPGDLVIEQGVNS--NRSVRWS 120 Query: 250 LWKECLTQPDFDNT---------ANTLIPMGTKEDPFWQGSGRTIF--------AEAAYL 292 ++++ L+ N A+ ++ F+ R + Sbjct: 121 IFRDILSDGYDKNMIELNTREFVAHLFADKKDSKEQFFVQGARELMFCVIISYIKRGLNN 180 Query: 293 MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVE-------EKIEKTAISIRAVLT 345 + S L D L + + + ++ A+ + L Sbjct: 181 LHARKQWSNRALRDFFLQFDEHSYMRLIEDCGESGVLNMILGNRGNGDNLQALGVFGELV 240 Query: 346 NYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 A++ L + + F+IR+++R + LFI+ + AS P+ +++ Sbjct: 241 T--TALQTLIDVFADDGDFSIREFVRA----KDKKALFINYDMAYKASQVPIYGSLVNLM 294 Query: 406 IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 ++ +L+ N + + CDEL T+ K D+ + + R G + G+QS QL+ IYG Sbjct: 295 LKEVLSQNNNAGKTI-LICDELVTMGK-TDIAQAVNLGRAKGLMVIVGLQSIEQLKSIYG 352 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 E A ++ M + +FR+ + + G+ R+G Sbjct: 353 EHDAIAMLAGMCNKLYFRANDPTTRNYIKEDFGKTTREYMVLSPGGCMSERREG------ 406 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGP 552 ++ +D L CYV Sbjct: 407 ----YIIEDADFNRLGLGQCYVKNADG 429 >UniRef50_Q31SG4 Membrane protein, n=6 Tax=Enterobacteriaceae RepID=Q31SG4_SHIBS Length = 137 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 134/137 (97%), Positives = 134/137 (97%) Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVN 640 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP INDKKSDSGVN Sbjct: 1 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPVINDKKSDSGVN 60 Query: 641 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVN 700 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPD QQMQRREEVN Sbjct: 61 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDTWQQMQRREEVN 120 Query: 701 INVHRERGEDVEPGDDF 717 INVHRERGEDVEPGDDF Sbjct: 121 INVHRERGEDVEPGDDF 137 >UniRef50_Q5V7P5 TraD protein n=1 Tax=Haloarcula marismortui RepID=Q5V7P5_HALMA Length = 705 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 91/538 (16%), Positives = 185/538 (34%), Gaps = 51/538 (9%) Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP-S 233 ++P D ++ + G G+GK+ +++ LA + VI +GE +++Y+ Sbjct: 135 AEMPFTLDQDVS-TAVVGETGSGKTSMMKLLAYQFPYYSNTAVIAHDTGEDFQAFYEELG 193 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 D + W+L+K+ ++ DF A + DPF + + +T FAE + Sbjct: 194 FDVQRIRHEDSDVVWNLFKDADSESDFREVAGAIFGEADGHDPFHRPAKQT-FAEMLMYL 252 Query: 294 RNDPNRSYSKLVDTLLSIKIEKL----RTYLRNSPA------ANLVEEKIEKTAISIRAV 343 ++ + L I L L+ + + ++ K A ++ Sbjct: 253 HLSAQKNNRR--HALCHADIVSLLNEGHIALKKALDEFDRLDSGHIDPDKGKGAQNVYQT 310 Query: 344 LTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLS 403 + V + G + F++++++ E+ + L I SN +L P+ + + Sbjct: 311 IKENVDPVFT--GDFGDYGEFSLQEYI----ENPEGRVLIIDSNPTELETLGPMYQLLVD 364 Query: 404 IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 +IR + N + DE+ L L + + RK + G+Q+ QL+D Sbjct: 365 WSIRYAM----NASNPTVHILDEIDALPALTQVTNLTARGRKHKARALVGVQTIGQLKDT 420 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG----ADPVRDG 519 Y + + +F + +F E+GE SE S + R Sbjct: 421 YS--TISGIVGNCPQGVYFGPGDTESTDFILDELGESRQYDRSEMVSMSHQGRGENPRTQ 478 Query: 520 VSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE-------- 571 + +T V+ ++ C V + S + P Sbjct: 479 ARDTYKEKDKTPVTSGLLRDFQPGEC-VAVSRTTWVHGQSYELADVRDSLPAQGAESPGS 537 Query: 572 --FIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPA 629 P + + ++E+ + SL E D E S E + +P A Sbjct: 538 SELEPSEDDTDIESDSWFSFTRARLDDVLYGSLGEDDDDE--SRESGPDRDAEVEPTIDA 595 Query: 630 INDKKSD-SGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENH 686 + D S + + + P +S+S + D ++ +N Sbjct: 596 TDGLGDDESSDPLDQTTANTAVTSPDTDH------PNLSDSEDAYDGGDHDQQSDDNT 647 >UniRef50_A6L5Y8 Mobilisation protein C n=20 Tax=Bacteroides RepID=A6L5Y8_BACV8 Length = 542 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 84/448 (18%), Positives = 166/448 (37%), Gaps = 48/448 (10%) Query: 179 IIRDSEIQNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVIYDRS-GEFVKSYYD----- 231 I NF ++G G+GK++ I + L + G IYD ++ ++ Y+ Sbjct: 95 IRYYYWFSNFLVYGGAGSGKTKSIGKPLMEQYIRSGFAGFIYDFKDFDYTRTAYNLIRKH 154 Query: 232 -------------PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFW 278 + NPLD R ++ + ++ L+P +K+D ++ Sbjct: 155 GYPHEFYYVNFTDMNRTYRFNPLDRR----NIKDRTMLMQLMEDVLGALMPPTSKQDEWY 210 Query: 279 QGSGRTIFAEAAYLMRNDPNR-SYSKLVDTLLSIKIEKLRTYLRNS------PAANLVEE 331 G+ + A L P + +V+ ++ +L+ +L+ + A L E Sbjct: 211 TGALGILNGVAYRLWDEFPECCTLPHIVNFVIKADTGQLQEFLKLNDISAMMAGAYLKAE 270 Query: 332 KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 EKT S + L+NYV + + I + T D+ + + + IS+N T Sbjct: 271 GSEKTQASYVSTLSNYVAKLATNENICY---VLTGNDFDFNLIDPEHPKLFAISNNYATE 327 Query: 392 ASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 + + PVI+M +SIA R + F DE+ T K+ D ++ R++G ++ Sbjct: 328 SVISPVIAMVMSIASR---SFSMENRVPFVFILDEMTTF-KVRDFEKLPSVLREYGAAFL 383 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 QS A+LE +Y + +S+ R+ + ++ G+ E K S Sbjct: 384 LLTQSGAKLEKLYSKLDRSSIEANFGNIFLGRTQDVEALKYYPLFFGKYEKEKKSTSSGS 443 Query: 512 GADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVT-----LPGPYPAVKLSLKYQTRP 566 V+ ++ + D SL + G + + + Sbjct: 444 SGGGRNSSVTISTQ--KEEIYESKDFASLEPGEFIGMGNRSNIKGHF---RKKFRLFELE 498 Query: 567 KVAPEFIPRDINPEMENRLSAVLAAREA 594 + + E+ + + +L E Sbjct: 499 EEPLPVVAFRTEKEISDNYTRILKDIER 526 >UniRef50_A3IXB1 Transfer complex protein TrsK-like n=2 Tax=Cyanothece RepID=A3IXB1_9CHRO Length = 580 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 105/580 (18%), Positives = 199/580 (34%), Gaps = 60/580 (10%) Query: 87 TFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEV 146 + + ++ H+ M Q +L A+V + + I + +G+ + Sbjct: 9 SIQTALSESFHNGSMANYFLQPEGMMLLGALVMMAVLAIAKGGGGGVKSSRGQLATGR-- 66 Query: 147 TGGRQLTDNPKDVARMLKKDGKDSDIR----------IGDLPIIRDSEIQNFCLHGTVGA 196 GG++ +N K VA K+ K + + G PI ++ + G + Sbjct: 67 FGGQKELNNAKKVALAQMKEKKRAPVTAWIGEPNNNPFGTDPIYLPDLNRSALILGAASS 126 Query: 197 GKS-EVIRRLANYARQRGDMVVIYDRS----GEFVKSYYDP--SIDKILNPLDARCAAWD 249 GK+ I + RG + +YD + +Y IL P A + Sbjct: 127 GKTFTFINPIGMSCIDRGYPIFMYDFKYPDQTSILATYARAKGYQVDILAPGYAESGVLN 186 Query: 250 LWKECLTQPDFDNTANTLIP----------MGTKEDPFWQGSGRTIFAEAAYLMRNDPNR 299 E + A+ L ED F+ SG + L R Sbjct: 187 PITEFIQDATSGLAASQLSEVLNANFKKQGSSQSEDGFFGPSGNQLTKATLLLARTMKYP 246 Query: 300 ---------SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 S S L +L K +++ ++ ++ EKT SI++ Sbjct: 247 DLITCAKILSISNLARRILK-KKKEMNPWILDAFGQFTSSASSEKTEASIQSTAQLMFNR 305 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 + + TI L + + L P+ + +++ + + Sbjct: 306 FIVPELLSVLCGKTTI------PTTLTGKRMLVLGLDQSKRDVLAPLFAALINMIVDKNM 359 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 AM +R DE+PT++ +P L + E R G C + G+Q+ QLE++YG+ A Sbjct: 360 AM--DRKDPFVLLADEVPTIY-IPMLKKWPNEHRSKGFCGILGVQNMTQLEEMYGKVGAR 416 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 ++ TRA+ + AE+ A + EKE + + S + S ++++ + Sbjct: 417 NIIGACATRAYMNPQDIETAEWIAKALPEKEVVLKHKNKSVSSGK--TTRSFSEEVKTKP 474 Query: 531 LVSYSDIQSLPDLTCYVTLP-------GPYPAV---KLSLKYQTRPKVAPEFIPRDINPE 580 L+S + I + V P G +P K S +Y+ K + P Sbjct: 475 LMSAAKIGQMQTGEAIVINPHFATKKEGFFPVHHRFKPSKRYKDLNKWCEKVWESSFRPG 534 Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE 620 + R + + P+ + E+ E Sbjct: 535 LIERSQNRPQITADDLTLRQETVDELFPDSLLKENDNTDE 574 >UniRef50_B1X2K3 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X2K3_CYAA5 Length = 573 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 79/456 (17%), Positives = 159/456 (34%), Gaps = 46/456 (10%) Query: 137 QGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGA 196 G+ + +E+ R+ K + ++ K + + + + G A Sbjct: 58 DGRFANSSEIRKARR-----KGLRQIAKGKPNKVATHLDHIVLPDLQPA--IAIVGRSRA 110 Query: 197 GKS-EVIRRLANYARQRGDMVVIYDRSGEFVKSY----YDPSID-KILNPLDARCAAWDL 250 GK+ +I +G + ++D G +K + + D + P ++ Sbjct: 111 GKTRSMIDPGIKSGIDQGWTMAVFDVKGNLMKKHLPYAHRKGYDCYVFAPGFDYSDGLNI 170 Query: 251 WKECLTQPDFD---NTANTL----IPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSK 303 + D AN L G+K D F+ G + L + P Sbjct: 171 LDFMESSADAKKGHEIANVLNLNFQEPGSKPDSFFSPQGVALLKTVFMLAKECPFPDLLS 230 Query: 304 LVDTLLSIKIE--------------KLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVK 349 L + +L +++ + A K ++TA+ I + + Sbjct: 231 AWKILSLENLAGRLAAAHKSKAFEGELSSWIGEAAVALRSVSKADETAVGIVGTAVTHFQ 290 Query: 350 AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL 409 + I + +I + + +F + + A+ P+++ + + I+ Sbjct: 291 TLVDRSIIPCLLKS-SI------PLDLKGKQIVFFQIDEQSEAATSPLVAAAIHMLIKRN 343 Query: 410 LAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAA 469 L R + DE ++ +LPD+ + ++G G QS +QL Y + A Sbjct: 344 LNAFVKRKNTFGLYLDEFTSI-RLPDIESWINRFAEYGFSAWLGYQSNSQLRLRYSREYA 402 Query: 470 ASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQ 529 S+ T+A F + + AE + +G KE +E SYG + R S M++ Sbjct: 403 ESILSSCGTKAVFNTGHPETAEKFSSALGTKEVWYKNESRSYGKNGSR---SVTDHMQKI 459 Query: 530 TLVSYSDIQSLPDLTCYVTLPG-PYPAVKLSLKYQT 564 L+S I C + PG Y +L + + Sbjct: 460 PLISGPAINRFEQGECVILNPGLDYRPYRLKVPIKK 495 >UniRef50_B5UW87 Protein TrsK n=1 Tax=Bacillus cereus AH1134 RepID=B5UW87_BACCE Length = 842 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 106/683 (15%), Positives = 212/683 (31%), Gaps = 111/683 (16%) Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQ----------LTDNPKDVARMLKKDGKDS 170 V + +FVV + GK ++ + G + + DN V + K Sbjct: 73 VAFIFIYFVVRFYKVLNGKGTYKDASSYGSEGTVRESKTTEVFDNVNFVKKTFNKKNSFK 132 Query: 171 DIR---------IGDLPII----RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVV 217 ++ + + P+I D +N + G+ G+GK++ L N +R +V Sbjct: 133 NLENHEGLIFGLLDNKPVILHEKTDIPNRNVFVVGSPGSGKTQS-YILTNIIFERNRSIV 191 Query: 218 IYDRSGEFVKS----------------YYDPSIDKILNPLDARCAAWDLWKECLTQPDFD 261 + D GE +S + + +I NP+D + + + Sbjct: 192 VTDPKGEIYESTAKYKMQQGYEARLINFKEMTISDRYNPIDY----------INKEIEAE 241 Query: 262 NTANTLI--PMGTKEDPFWQGSGRTIFA-EAAYLMRNDPNRSYSKLVDTLLSI---KIEK 315 A T++ + ++ FW + + Y+ PN ++ V +L+ E Sbjct: 242 QVATTIVYSSLQGQKPDFWTKAEVALLKTLLLYVKYECPNEAHLYKVKQVLTEHGRTPEL 301 Query: 316 LRTYLRNSP-------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD 368 + + + A +V +K SI L + + FT Sbjct: 302 MDEFFSHLEPEHPAYSAYTIVRMAEDKVRASIFVSLAITLSKFD-----PKDVRRFTETS 356 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR----VWFFC 424 +K +++ + +P+ + + + + L + + + V Sbjct: 357 DFLLDDIGKKKMVVYVVLPVADS-TWEPLTANFFTQMFQRLYDVADRNFNKLPVFVNLLL 415 Query: 425 DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS 484 DE P L K+ E L R +G IQS QL D Y ++ A ++ + R Sbjct: 416 DEFPNLGKIEGYEETLATCRSYGISCSTIIQSIGQLIDKYNKEKAEAIIGNCSLRILLGV 475 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 A + + IG+ S D S + + ++L + ++ LP Sbjct: 476 GDKLTANYFSELIGKTTIEIQQTSVSKNERGGSD--SKSNNYKGRSLFTPDELTRLPRNE 533 Query: 545 CYVTLPGPYPAVKLSLKYQ-----------------TRPKVAPEFIPRDINPEMENRLSA 587 + + G YP +L YQ K+ EF D E + Sbjct: 534 AILLVSGRYPI-RLKKAYQFTFFKGILNEDNKTSRFDYLKLKAEFANNDATEVAEELVLT 592 Query: 588 VLAAREAEGRQMASL-------------FEPDVPEVVSGEDVTQAEQPQQPVSPAINDKK 634 + + E + E+ DK Sbjct: 593 KKEHVPEKKEIIIEKETMTIEEMMMEEVQEKSHENEIGPENEQNLTAAIFFSGLDEIDKN 652 Query: 635 SDS-GVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQ----QENHPDI 689 + V +E E E+++ + + G V+ E+ + Sbjct: 653 LNQLENPVNEIDLEMEYLNNSYAELQKNESELVLDEGPEVEQEVTTEIDLPMGDESELVL 712 Query: 690 QQQMQRREEVNINVHRERGEDVE 712 + + +EV + G++ E Sbjct: 713 DEGPEVEQEVTTEIDLPMGDESE 735 >UniRef50_C6X7V8 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7V8_METSD Length = 748 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 115/624 (18%), Positives = 216/624 (34%), Gaps = 60/624 (9%) Query: 86 KTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE 145 + + + A + H Y L + A + L + F K Q E Sbjct: 96 EQYSLYMATIKHYGY----QYLLIPRIMFATFIGLFGATLGFMS---KHSNPVKAQVET- 147 Query: 146 VTGGRQLTDNPKDVARMLKK-------DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGK 198 G +L + V ++ K GK ++I +L + + + G G GK Sbjct: 148 HMRGMKLLEFGDAVEELVSKFASEILKHGKFTEIA-ENLSLSMKRVFAHHIIFGASGTGK 206 Query: 199 SEVIRRLANYARQRGDMVVIYDRSGEFVKSYY-DPSIDKILNPLDARCAAWDLWKECLTQ 257 S+ + + +G +I D EF ++Y + I++P DAR DL + Sbjct: 207 SQYMGSAIFDSINKGLKTLILDPKYEFTSAFYKNNGKMAIIDPTDARSHVVDLADLVASI 266 Query: 258 PDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN-------DPNRSYSKLVDTLLS 310 A LIP DP W + R +F ++ PN S+ L D ++S Sbjct: 267 GLIKKFAAALIP-AKGNDPMWSNAARAVFTGLILYLKAMFKDDNGKPNFSWKDLADVMVS 325 Query: 311 IKIEKLRTYLRNSPAANL-----VEEKIEK-----TAISIRAVLTNYVKAIRYLQGIEHN 360 E++ ++N L + ++ + TA SI L +++ IR L ++ Sbjct: 326 -TPEQVIYIMQNYYPEALKLVGEINKETNQLTENATATSIMINLLSFMGGIRDLARFWYD 384 Query: 361 -----GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM--G 413 ++ +M K +FI N +I L+ +I L + Sbjct: 385 DPENPQPKISLLRFMTDPNYKIKT--IFIKPNDIEGEMSSCIIRAVLTYSISLLDSPKIP 442 Query: 414 ENRNRRVWFFCDELPTLHKL------PDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 +++ FF DE KL P + + + R + Q+ QL IY ++ Sbjct: 443 DSKTPNGIFFLDEFHAPGKLVNELDQPVIDKGIDRGRSKQWAFYLATQNIIQLYKIYTKE 502 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 S + + +P + A +GE+ K S + V S+ Sbjct: 503 DVDSWRETTSNFILTGAPLGETASKVCEYLGEQFIDKLHTSLSGSGNGV--SASSNYQEH 560 Query: 528 RQTLVSYSDI---QSLPDLTC-YVTLPGPYP-AVKLSLKYQTRPKVAPEFIPRDINPEME 582 + ++ S++ + D Y+ + P L + P+VAP +I R Sbjct: 561 SKKVLLPSELTEKLQITDTHIRYLAILRGLPNVYLLEKPFVDIPQVAPIWIERKQLFATG 620 Query: 583 NRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVP 642 + + V + + + + G+D + +QP+ + Sbjct: 621 SLDNRVSESITTAIGVAMKIEQETI--KTKGKDEPTIDLNKQPIIEDEGNLGDWVDTGQH 678 Query: 643 AGGIEQELKMKPEEEMEQQLPPGI 666 A + +E + EE +E + I Sbjct: 679 ADAMSEEERKFIEESVESETIKDI 702 >UniRef50_Q8YK80 All8037 protein n=3 Tax=Nostoc RepID=Q8YK80_ANASP Length = 590 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 90/530 (16%), Positives = 171/530 (32%), Gaps = 63/530 (11%) Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGK 198 KQ +E P+ + + + ++I + + + G+ G+GK Sbjct: 75 KQITERRHNRVALYIGTPRGTKFQVVGNKRITNIPEDKNRLYLPDVQRGILVSGSGGSGK 134 Query: 199 S-EVIRRLANYARQRGDMVVIYD------------RSGE--FVKSYY--DPSIDKILNPL 241 + +I L A +G ++IYD G+ + Y IL+P Sbjct: 135 TFSLINPLIRSAIDQGLPIIIYDYKYCHQESEKAEAKGQAPKLAGYAAERGYEVTILSPG 194 Query: 242 DARCAAWDLWKECLTQPDFDNTANTL---------IPMGTKEDP-FWQGSGRTIFAEAAY 291 + + D + A L + G D F+ +G + Sbjct: 195 FPESGVANPLDFLRSPTDAE-MARQLAIVLNRNFKLTSGDSSDSGFFANAGDQLAQAIFM 253 Query: 292 LMRNDPNRSYS------KLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLT 345 L R L + I+ L +++ + L +TA SI + Sbjct: 254 LARGTSFPDIMMCHQLLSLPRLIDRIQQADLNPWVKVAFDQFLSVAGSPETASSIVGTTS 313 Query: 346 NYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 + I + + + + + P++ L + Sbjct: 314 GLFTRFMTPSTLSAFCGTTNI------PLDLTGRKMVIFGMDKEKRDVIAPLLVSILHLL 367 Query: 406 IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 + + + R + DELPTL+ LP LV+ L + R+ G + G Q+ +QLE Y Sbjct: 368 VSR--NVAKKRTEPLVLALDELPTLY-LPALVDWLNQNREDGLVSILGFQNISQLEKAYS 424 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 E+ A ++F T+AFF + + +G+++ + G S + Sbjct: 425 EEVANAIFGGCATKAFFNPQDDVAGQRFSNFLGDEQIKHKERSRTSG-GKGGASTSLSEQ 483 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMEN-- 583 + L + SLP+ + PG ++ L + ++ D N E+E+ Sbjct: 484 NSTRNLFEINQFNSLPEGRAIIVSPGFRGGREVGLPLLEQIQIPQA----DRNSEVESVK 539 Query: 584 ---RLSAVLAAREAEGRQMASLFE----------PDVPEVVSGEDVTQAE 620 +L + E P V E E + Q E Sbjct: 540 EWYKLQQKFITQSTLREPSGEELEIRRLEAERLLPLVEEKAEAEKIMQNE 589 >UniRef50_C9RCI6 TRAG family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RCI6_AMMDK Length = 673 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 85/499 (17%), Positives = 161/499 (32%), Gaps = 41/499 (8%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG----GRQLTDNPKDVARM 162 L + V + L +CL + W G+ V G +P + Sbjct: 91 DLTAPAVFRVWLVLSLCLAVGAALVWYRLMYGEALVGEAVGRSTPGGTARWSSPFALREY 150 Query: 163 LKKDGKDSDIRIGDLP---------IIRDSE-IQNFCLHGTVGAGKSEV-IRRLANYARQ 211 +G +P + D+ +N + G G KS IR A Sbjct: 151 FGFSWSTPGYVLGGVPVGIGVRPVVLKEDAPGNRNVAVFGPPGRMKSVGPIRCNLFQAAV 210 Query: 212 RGDMVVIYDRSGEFVKSY-----YDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDN--- 262 G VV+ D GE V+ + + + K+ N + W+ E + D Sbjct: 211 SGTSVVVTDPKGELVRDFRRFFEKNGYVVKVFNLVSMLNSDRWNPLSEVKSGLDAQLFTS 270 Query: 263 --TANTLIPMGTKEDPFWQGSGRTIF-AEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLR 317 ANT +P DPFW + + A Y++ P R+ L L S + L Sbjct: 271 VVIANTQVPGRKGGDPFWDRAEMNLLKALVLYVVSEVPRAQRNLGTLYRVLASGDSKALD 330 Query: 318 TYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN---GEPFTIRDWMRGVR 374 + P + + + V + + + + + + D + Sbjct: 331 RTFQALPPDHPAKLPYNLFLETSGTVRSGVIIGLGTRLEVFQDRLVCALTSASDIDLELP 390 Query: 375 EDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPT 429 ++ + + + D ++ + S++ S L + + + V F DE Sbjct: 391 GKERCAYFCVLPDTD--SAFNFLASLFYSFLFIKLTRLADRQPGGRLPVPVHFLLDEFCN 448 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 + ++P+ + + R G Q+ QL ++YG+ + + Sbjct: 449 IPQIPEFEKKISTMRGRGIGVTVVFQNIPQLMNLYGQGLWEIILGDCDYWLVLGGVERST 508 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRD--GVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 A + + +G K +EQ G D + +ER L++ S++ L C V Sbjct: 509 AAYVSDILGHTSVKKVTEQRPKGIMKWLDPWEGRETEGVERAPLMNLSEVTRLGLDECLV 568 Query: 548 TLPGPYPAVKLSLKYQTRP 566 + L Y P Sbjct: 569 RVADGRVVKLRKLPYWRHP 587 >UniRef50_UPI0001C35621 ATPase involved in conjugal plasmid transfer n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35621 Length = 642 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 99/578 (17%), Positives = 198/578 (34%), Gaps = 51/578 (8%) Query: 121 VICLITFFVVSWILGRQGKQQS---ENEVT---------GGRQLTDNPKDVARMLKKDGK 168 V ++ FF + I+ QG E++ G + R+LK+D Sbjct: 61 VFTILLFFAFAGIVVFQGSISDTSGEDKERNFTYSKLGTYGTAGYMEDAERRRVLKEDKD 120 Query: 169 DSDIR--IGDLPI--------IRDSE-IQNFCLHGTVGAGKSEVI-RRLANYARQRGDMV 216 + I L + DS+ +N + G+ G+ KS R + +RG+ + Sbjct: 121 IRKVEGIIFGLEMMSGNVLSLPVDSKLNRNIAVCGSQGSMKSRAFARNMILQCVRRGESM 180 Query: 217 VIYDRSGEFVKSY--YDPSIDKIL---NPLD-ARCAAWDLWKECLTQPDFDNTANTLI-P 269 I D E + Y + + N +D AWD E D + +I Sbjct: 181 FITDPKSELYEDMVAYLKAQRYTVRQWNLIDLENSDAWDCLAEIDEGGLIDIFVDVVIRN 240 Query: 270 MGTKEDPFWQGSGRTIFAEA---AYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAA 326 K D F+ + Y D +R++++ L++ +E + P + Sbjct: 241 TTDKFDHFYDNVEMDLLKALCLYVYHEYKDKDRTFAESYKILINQSLEAIDGIFDRLPTS 300 Query: 327 NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI---RDWMRGVREDQKNGWLF 383 + + + V N V + I N + I ++ + +K + Sbjct: 301 HP-AKGPYRLFAKAEKVKGNAVLGLGTRLQIMQNEKVQKITSHKEIDLTLPGREKCAYFC 359 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR-----VWFFCDELPTLHKLPDLVE 438 I+S+ D ++ + ++++S L+ + + R V F DE P + +PD + Sbjct: 360 ITSDQD--STYDVLATLFVSFLCIKLIRYADRQKNRKLPVPVHFILDEFPNIGIVPDFKK 417 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 L AR Q+ QL++ Y + + + F A + + G Sbjct: 418 KLATARGRNIGMSIIYQNIPQLQNRYPDGQWEEILGGCDMSLFLGCNDMTTAMYFSNRSG 477 Query: 499 EKEHLKASEQYSYGADPVRDGV---STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPA 555 E +S + + + + V S + ++ L+ +I P V + G Sbjct: 478 EVTVSVSSVRKNLNTVRMSNYVPDYSETSSVGKRMLLLPDEILRFPLDQALVIIRGQRIL 537 Query: 556 VKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPD---VPEVVS 612 + Y P + E R L A + + + E + + S Sbjct: 538 RVRKMDYTMHPDAKKLIQEKTDCHVPEWRREEELRAEQDSKVRQEDIGEQESGFEQGIWS 597 Query: 613 GEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL 650 G+D+ + ++ Q+ N+K GI +++ Sbjct: 598 GKDLKKEDESQEVGKSKANEKNIQEEPTERKLGIIEKV 635 >UniRef50_A8ZL40 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZL40_ACAM1 Length = 575 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 86/490 (17%), Positives = 171/490 (34%), Gaps = 49/490 (10%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSE-NEVTGGRQLTDNPKDVARMLKKDGKDSDIRI 174 + + + W ++ + T Q + ++ + + +R+ Sbjct: 26 LPWLTGLLALIVIALWWFEDETRREPDDARWATRREQHRAKMLGLKQIRDRKRDEIALRL 85 Query: 175 G-DLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGEFVKSY--- 229 G D P+I + G G GK+ VI A ++ ++++D G K + Sbjct: 86 GSDDPLILPDLQPLVTIVGGSGKGKTATVIELALADAIRQEHTLIVFDVKGTLKKKFIPF 145 Query: 230 ----YDPSIDKILNPLDARCAAWD---LWKECLTQPDFDNTANTL----IPMGTKEDPFW 278 DP P +D ++ + A+TL I + + PF+ Sbjct: 146 ALKQPDPYECYCFAPGKRYSHGFDYLKFMQDADDSLRARSIASTLSDNVIVNLSGKHPFF 205 Query: 279 QGSGRTIFAEAAYLMRNDPNRSYSKLV---------DTLLSIKIE-------KLRTYLRN 322 + + + + + E L ++R Sbjct: 206 DNHAEYFLQALLMMAKRADYSDLPMVWALMGLPGIAERIQMADQEGAFKVDSDLGMWVRQ 265 Query: 323 SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE------HNGEPFTIRDWMRGVRED 376 + + TA I A NY+ + Q I TI + Sbjct: 266 QLVGLMSVTGTQDTAGGILASGINYLLPMVNRQTIPCLSIDGREPTQSTI------PLDL 319 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDL 436 +F + + P++++ + + I+ L R+R F DE L LP Sbjct: 320 PGKQIIFFELDGQAKKATAPLVAVAIHLLIQRNLNEDTERDRPFGVFLDEFARLM-LPSF 378 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 E++ R +G +QSY+Q + Y + + S+FD +T+ F+S S+K+ E + + Sbjct: 379 EEVVSLDRSYGFYSFVSMQSYSQPKIKYQSETSESIFDNTSTQFIFKSGSYKVREDLSAD 438 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG-PYPA 555 +GE S+ SYG + + S + +++ L++ SDI+ L T PG Sbjct: 439 LGEYTKHYHSKSRSYG--KMGNSRSRNEQEKKKRLITASDIKRLKKGEFICTNPGMDDRP 496 Query: 556 VKLSLKYQTR 565 +++ + R Sbjct: 497 IRMRFNLKKR 506 >UniRef50_B9JPS9 TRAG protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPS9_AGRRK Length = 787 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 107/616 (17%), Positives = 205/616 (33%), Gaps = 84/616 (13%) Query: 56 NGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLA 115 Y W + L+ + G M A Q ++ + + + Sbjct: 19 GAAFYTWSASYAAGSYLMLKSSTMWKSFAGGDVLMPAKQA-----WVYLGNPIVTKLISV 73 Query: 116 AVVA-LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI 174 A ++ L + + ++ + R + P D +R +S + Sbjct: 74 ATISTLALSAVVAVAITLAIKRPWQ-------------VRPPADGSRFATLKDLESAGLL 120 Query: 175 GDLP----------------IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI 218 G P +R S +F ++G +GK + + V++ Sbjct: 121 GGAPGKSVLLGTFGKGRNAVDVRYSGDSHFFVNGPSRSGKGRGF--VMPNLLEYEGSVIV 178 Query: 219 YDRSGEFV-----KSYYDPSIDKILNPLDARCAAWDLWKECLTQP----DFDNTANTLIP 269 D E + P A W+ P D N A TL+P Sbjct: 179 LDVKLENYTLTGPARMAMGQRCYVFAPGSAHSHRWNPLDFVRDWPERSTDLINLAATLLP 238 Query: 270 MGTKEDPFWQGSGRTIFAEAAYLMRND-----------------PNRSYSKLVDTLLSIK 312 +G KE+ +W+ + R + A A + R +S ++ ++ + Sbjct: 239 IGEKEEAYWKQTARGLLAGALGYVLESASMEGRRNLRSVLRLLSTGRPFSAVLQEIIDNE 298 Query: 313 IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWMR 371 E L ++ S +L ++ ++ S +T + A L E +G F IR R Sbjct: 299 PE-LDQFILGSFRQHLGRDEEQRP--SFEGHVTTALAAFNNLLIAEACSGSDFDIRSLRR 355 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA--MGENRNRRVWFFCDELPT 429 K LFI++ +++P+I + + +L G + ++ DE Sbjct: 356 ------KPFSLFIAAPVSDFGTVEPIIRLLIQQIHDVMLRSLPGADEPHKILMMLDEFYQ 409 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 +LP++++ P +G Q+ QL++ YG++ +L M+ + Sbjct: 410 FERLPEIIKRAPLVAGYGLTIALVAQNIPQLDERYGQQTRNALLGNMDVKLSIAVGDDAT 469 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTL 549 A+ + +G K + E + + ++ E L+ +Q L D + + Sbjct: 470 AKIVSDNLGRKYVER--EGWGRQTGLLFGKQASSGRFELVPLIDPGSVQRLDDSNTVLQV 527 Query: 550 PGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPE 609 G Y A+ L + + FI R E + L E + LF P PE Sbjct: 528 RGGYGAILNKLNFYGDIR----FIARRREVEGW---KSELVIPEIRIQTEWPLFAPQPPE 580 Query: 610 VVSGEDVTQAEQPQQP 625 + Q EQ Q Sbjct: 581 LAVELPAVQDEQRQSS 596 >UniRef50_Q0KKK9 VirD4 type IV secration protein n=1 Tax=Plasmid pLB1 RepID=Q0KKK9_9ZZZZ Length = 638 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 80/543 (14%), Positives = 178/543 (32%), Gaps = 51/543 (9%) Query: 108 LWSAFVLAAVVALVICLITFFVV---SWILGRQGKQQSENEVTGGRQLTDNPKDVARMLK 164 + A AV+ + + ++ +V L + + E E+ + R+ Sbjct: 61 VTEALWRGAVIGVPLPVLLMAIVLRPKKNLHGEARFAREGEIRKAGLRAKKGIVLGRVRN 120 Query: 165 KDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE 224 ++ + +G + ++ L G+GK I + Q D VV+ D E Sbjct: 121 GFFRNGFLMVGKM--------EHVLLEAPTGSGKGVGI--VIPNLLQWPDSVVVLDIKRE 170 Query: 225 ---FVKSYYDPS--IDKILNPLDA--RCAAWDLWKECLTQ------PDFDNTANTLIPMG 271 + + NP D R A ++ + A L Sbjct: 171 NYEITAGFRRKGGQKVVLFNPTDREGRTARYNPLSYINRADPIEVLVELQKIATMLFVPP 230 Query: 272 TKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEE 331 K + FW S RT F A + R +S + +I + ++ + + + E Sbjct: 231 EKGEAFWTESARTAFVGIASWIAAKSERPFS-FGEIYRTITMPGMKAFFAKEAGDSALSE 289 Query: 332 K-----------IEKTAISIRAVLTNYVK-AIRYLQGIEHNGEPFTIRDWMRGVREDQKN 379 + T I +T+ + I + F++ D R Sbjct: 290 GCRAALSDFTSSADNTFTGIIQTVTSKLNLWINPIVDRATAESDFSLTDLRRI------P 343 Query: 380 GWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR--VWFFCDELPTLHKLPDLV 437 +++ + D + P+ +++ I + + + V DE L + + Sbjct: 344 TSIYLGVSPDELDRVAPLYNLFFQQLIDLNTRQLPDESEKLSVLLILDEFARLGRAQVIA 403 Query: 438 EILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEI 497 R +G + IQS +QL ++YGE A + F ++A+ + + Sbjct: 404 NAFSYVRGYGLRLLPVIQSRSQLRNVYGEHGADEIVSNCGVEIAFTPKELRVAKELSERL 463 Query: 498 GEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVK 557 G + +E S + S +R+ L+ ++ LP+ + + G P ++ Sbjct: 464 G--YLGQDAESRSLTIHGLLANRSKTISEQRRALMLPQELMQLPEDD-ILVIRGGIPVIR 520 Query: 558 -LSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDV 616 ++Y P + ++ ++ + ++A+ + +D+ Sbjct: 521 GKKIRYFKDSVFRSRLTTAPAVPALPKPVAPIVPVDDLSDEELAAFNDYSALADDQVQDI 580 Query: 617 TQA 619 + Sbjct: 581 PED 583 >UniRef50_B1I2W3 TRAG family protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2W3_DESAP Length = 648 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 82/514 (15%), Positives = 170/514 (33%), Gaps = 54/514 (10%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 + + + + LV ++ + R + + + Sbjct: 58 FQNPLLAAVTVPFQGTLPWWLGLNLVFGFFGYWYYLQLRARFPDTFNPRDEVDFMRDPSC 117 Query: 156 PKDVARMLKKDGKDSDIRIG-------------DLPIIRDSEIQNFCLHGTVGAGKSE-- 200 +R L + + + G + + +N + G+ G+ K+ Sbjct: 118 G--TSRWLDRRNAEKVLSFGHGPGFLFGTMEGDPVRLHGSDLNRNVIVFGSPGSRKTRSL 175 Query: 201 VIRRLANYARQRGDMVVIYDRSGEFVKSY--YDPSIDKILNPLDA----RCAAWDLWKEC 254 VI + G+ VI D GE ++ Y S + +N + R W+ E Sbjct: 176 VIPNILQAVVS-GESCVITDPKGEILRYTLGYLQSRNYNVNVFNLVEMHRSDRWNPLAEI 234 Query: 255 LTQPDFDNTANTLIPMGT-------KEDPFWQGSGRTIFAEAAYLMRND---PNRSYSKL 304 T D + +I DPFW + + + A + N+ R+ L Sbjct: 235 QTGLDAQLFSEVVIANTAVPGIRKMGGDPFWTRAEQNLLKALALYVVNEMPPEQRNLESL 294 Query: 305 VDTLLSIKIEKLR----TYLRNSPA---ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 L +++L + + PA N+ + + L ++ ++ Sbjct: 295 YAVLSCGSLDRLDITFGSLAPDHPAKAPYNVFSHADKPVKGGVIIGLGTRLQVVQN---- 350 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 + D ++ + I S+ DT + + S++ + L + +++ Sbjct: 351 PEVKRLTSTSDIDLRAPGLERCAYFGIVSDTDT--TFDFLASLFFTFLFIKLTRLADSKG 408 Query: 418 R----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 RV F DE + +PD + + R G V QS AQL++ Y + + Sbjct: 409 GPCPVRVNFILDEFCNIGSIPDFKKRIATVRSRGLNCVLITQSVAQLKNRYPDDEWQEII 468 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 ++R F + A++ + +G + S Q+ A D V G + L++ Sbjct: 469 SCCDSRLLFGANEPMTAKYFSDLLGVGTVNRVSRQHKVTAL---DPVKLGHAPSPRNLLN 525 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 +I L + L PA+ L + P+ Sbjct: 526 LDEILRLNREKAVLCLASFPPAMIEKLDFTGYPE 559 >UniRef50_A4X0P9 TRAG family protein n=2 Tax=Rhodobacteraceae RepID=A4X0P9_RHOS5 Length = 713 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 80/500 (16%), Positives = 159/500 (31%), Gaps = 57/500 (11%) Query: 186 QNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSID--KIL 238 ++ L+ +GK V+ L N+ D V+ D E + + Sbjct: 171 EHMLLYAPTRSGKGVGVVVPNLLNWP----DSAVVLDIKKENWQLTAGFRKAGGQEVFLF 226 Query: 239 NPLDA--RCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 +PLD R W+ D A+ IP+ +K DPF+ + +T F Sbjct: 227 DPLDPEGRTHRWNPLASVRRGTAFQVEDLQRLADLFIPVASK-DPFFDRAAQTAFVGVGG 285 Query: 292 LMRNDPN--RSYSKLVDTLL---------SIKIEKLRTY-----LRNSPAANLVEEKIEK 335 + P + +L L +I++ L+ N K E Sbjct: 286 YLAETPELPFTLGELYRQLTLTPNFVRTFKARIDERAEAGRPLSLQTIATLNDFLSKSEN 345 Query: 336 TAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASL 394 T S+++ +T + L F D R K +++ + L Sbjct: 346 TFESVKSTITANLGLFANPLLDRATAASDFDFADLRR------KRMTIYVGITPNNLGRL 399 Query: 395 KPVISMWLSIAIRGLLAMGENRN----RRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 P+++++ + + N RV DE + +LP + +G Sbjct: 400 GPLLNLFFQSCVDANMQELPEHNPALKHRVLLCMDEFAAVGELPAFKRGIGYFAGYGLKV 459 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 + +Q+ AQL DIYG A + D F K A + +G S S Sbjct: 460 LTIVQTPAQLADIYGSDGAEAYMDNAGITVVFTPKGLKEARNLSERLGTYGAEAISTSRS 519 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ------T 564 R+ + +++ L+ ++ L + G P +++ Sbjct: 520 K-LLASRNPPTISVSEQKRALMMPQELLQLDQSGAIILAAGHPPIRAKKIRFYAEEAFLE 578 Query: 565 RPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPD----VPEVVSGEDVTQAE 620 R ++ P IP + + + +++L + ++ +V + Sbjct: 579 RSRIPPPEIPASRADATADDVRRLRDENRRMREDLSALTDEVRRIAALKLAQAANVAAGQ 638 Query: 621 QPQQPVSPAINDKKSDSGVN 640 + P++ K + Sbjct: 639 PAEVPMTDEEIAKPETISFD 658 >UniRef50_A8ZPT9 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPT9_ACAM1 Length = 591 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 98/566 (17%), Positives = 184/566 (32%), Gaps = 78/566 (13%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI- 174 ++ + L+ ++ Q K + K AR L + K + + + Sbjct: 37 LLMGGCMALLLVPMLFQKYSGQRKGILARARFATAREIHQSKIYARKLIQQNKHNKVALW 96 Query: 175 -------------GDLPIIRD-------SEIQNFCLHGTVGAGKS-EVIRRLANYARQRG 213 + I D ++ + G G+GKS V+ +RG Sbjct: 97 IQEPKGIIINHQKRQIEIPPDNNSFYVSHLEEHSLILGNTGSGKSYSVLDPFKRSVIKRG 156 Query: 214 DMVVIYDRSG-EFVKSYYDPSIDK------------ILNPLDARCAAWDLWKECLTQPDF 260 + YD G E PS ++ P +++ D Sbjct: 157 QPLFDYDYKGHEESPHSLAPSSSIAGYALDHGYKVYVVAPGFPDTDKFNILDVLKHPQDG 216 Query: 261 DN---TANTL-----IPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIK 312 N +N L + + F+ +G + L++ + L +L++ Sbjct: 217 ANAFQLSNVLNENFKLSASDQGADFFSLAGNQLIQALFMLVKGSEVCADIALAHKILALP 276 Query: 313 I-------EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFT 365 +L Y + + L +TA SI + + + T Sbjct: 277 NFSKRIAEVQLPQYQKVAFDNYLASADSPETAASIATTASIMFSRFMIPEVLSTFCGQST 336 Query: 366 IRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCD 425 + E + N ++ P+++ + + I + M R V FF D Sbjct: 337 M------PLEITGRTMVIFRLNPQIEFAVAPLLASIIYLMINRNIYMA--RKDPVHFFLD 388 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E+ TL K+P L ++L AR GGC+ G Q LE YG K ++ T + Sbjct: 389 EVQTL-KVPSLSKVLQVARSAGGCFYLGTQGIDLLESTYGVKETENILTGCKTVFVGQLS 447 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + AE+ + G ++ ++ S+G S G + LV + LP Sbjct: 448 HNGTAEYYSKYFGMEDISYKNKSRSHGKGGTNR--SEGDQQNTRPLVEIQQLLELPQGQF 505 Query: 546 YVTLP--GPYPAVKLSLKYQTRPKVAPEFIPRDINP------------EMENRLSAVLAA 591 Y G AV++ + +QT V P + RD++ ++++ + Sbjct: 506 YCRNRGIGNKKAVRIPVHHQT---VIPPWELRDMDKGKQTWKKYRKLRIKQSKIQPLTDQ 562 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVT 617 +A PD V +G+ Sbjct: 563 DLETRESVARSLVPDHANVAAGQQAA 588 >UniRef50_A7HU67 TRAG family protein n=108 Tax=Bacteria RepID=A7HU67_PARL1 Length = 687 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 106/581 (18%), Positives = 187/581 (32%), Gaps = 62/581 (10%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG-GRQLTDNPKD 158 Y W + W A+ A + S + G G+ +T Sbjct: 52 YYPWRLFEWWYAYEAYAP-GVFTRAGAIAASSGVAGCAVAIAGSLWRARQGKLVTTYGSS 110 Query: 159 VARMLKKDGKDSDIRIGDLPIIRDSEI-------QNFCLHGTVGAGKSEVIRRLANYARQ 211 + + R + + R E ++ +GK + + Sbjct: 111 RWAKRGEIERAGLFRAAGVFLGRLGEQYLRHDGPEHVMAFAPTRSGKGVGL--VVPTLLS 168 Query: 212 RGDMVVIYDRSGE--FVKSYYDPSID--KILNPLDARCAAWDLWKECLTQPD----FDNT 263 VI+D GE + + + + NP D R A ++ E PD N Sbjct: 169 WTGSAVIHDIKGENWQLTAGWRSRFSHCLLFNPTDPRSARYNPLLEVRKGPDEVRDVQNI 228 Query: 264 ANTLI-PMGTKED-PFWQGSGRTIFAEAA-YLMRNDPNRSYSKLVDTLLSIKIEKLRTYL 320 A+ L+ P G E W+ + + A +++ + ++ ++ V TLLS L Sbjct: 229 ADILVDPEGALERRNHWEKTSHALLVGAILHVLYAEEEKTLAR-VATLLSDPRRSFEHTL 287 Query: 321 R--------NSP-----------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 R +P AA V K + + + +++ R Sbjct: 288 RAMMATNHLGTPEHPEVHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPIVAATI- 346 Query: 362 EPFTIRDW-MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA--MGENRNR 418 + DW + + + + L++ + KP+ + L+ R L G+ R Sbjct: 347 ---SACDWRIADLVDAARPVSLYLVIPPADISRTKPLARLVLNQIGRRLTEKLEGDPAKR 403 Query: 419 R---VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 R + DE P L +L L +G QS Q+ YGE A + D Sbjct: 404 RRYGLLMMLDEFPALGRLDFFETALAFMAGYGIRAYLIAQSLNQISKAYGENNA--ILDN 461 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY-SYGADPVRDGVSTGKDMERQTLVSY 534 + R F S + A+ + +G L+A Y + P V + + L++ Sbjct: 462 CHVRIAFSSNDERTAKRISDALGTATELRAQRNYAGHRLAPWLSHVMVSRQETARPLLTP 521 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLSLKYQ------TRPKVAPEFIPRDINPEMENRLSAV 588 ++ LP V + G P L+Y R K AP R Sbjct: 522 GEVMQLPSADELVLVSGLAPIRAKKLRYYEDKNFTERVKPAPVLAENGYRDRPAPRPDDW 581 Query: 589 LAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPA 629 ++A+ PD P+ E+ +Q + P PA Sbjct: 582 SGQVRGLDHRLATASVPD-PDAGLAEEEGGLQQQRHPGRPA 621 >UniRef50_D2QVF5 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVF5_9SPHI Length = 633 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 82/491 (16%), Positives = 160/491 (32%), Gaps = 70/491 (14%) Query: 101 MIWCSEQLWSAFVLAAVV-ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 ++ + + F V A V L V W+L Q K+ + G Sbjct: 99 LLGMAHRFPYQFRYIVPVGAGVSTLFGIGVGFWLLRPQPKRPITEDRKAG---------- 148 Query: 160 ARMLKKDGKDSDIRIGD-LPIIRDSEIQNFCLHGTVGAGKSEVI-RRLANYARQRGDMVV 217 + K G G + I + + G G+GKSE + + A + + Sbjct: 149 ---VSKKGFQFRTMSGGWIKIPNPF--RGVFITGGPGSGKSESLAKPFIRQAFAQNYCGI 203 Query: 218 IYDRSG-EFVKSYY-----DPSIDK---ILNPLD-ARCAAWDLWK--ECLTQPDFDNTAN 265 +YD E K Y +P ILN D R + L+ + A Sbjct: 204 LYDVKFPELTKYAYHYRKLNPDATTQFCILNFQDMNRTHRLNPIAPENLLSITYAEEYAL 263 Query: 266 TLI----PMGTKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTY 319 LI ++ FW S + + +R + V + + +KL T Sbjct: 264 ALIKNLQQETIEKQDFWSRSCTAVLTGLIWYLRKHHPAQCTLPHAVTLITKMPYDKLMTM 323 Query: 320 LRNSPAANL---------VEEKIEKTAISIRAVLTNYVKAIRYLQGIE---HNGEPFTIR 367 + S + L + K + L + + + E F++ Sbjct: 324 I-GSDSECLSYVMSVITAIGNKSADQLSGVIGTLQVMLAKLATPEVFWVMSATDEGFSM- 381 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDEL 427 + K +L + + + SL+P++ ++ ++A++ M DE Sbjct: 382 ----DLNNPNKPIFLCLGGDREVMDSLRPLLGLYSTVALKR---MNRQGKHHSILLLDEA 434 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSH 487 PT++ +P+ +I R V+ Q +Q+ YGEK + + ++ + + S Sbjct: 435 PTIY-IPNFEQIPATGRSSQIATVYMCQDLSQVRKYYGEKESQMILGTLSNQFYGAVSSA 493 Query: 488 KIAEFAAGEIGEKEHLKASEQYSYGAD------------PVRDGVSTGKDMERQTLVSYS 535 + A + + IG+ E + E P R + + + +V+ Sbjct: 494 ETASYVSRLIGKHEVITPEESRDNSPAFDLGSLFDRRHQPQRGRSTISYRKQERPIVNPE 553 Query: 536 DIQSLPDLTCY 546 D+ Sbjct: 554 DLHEFDKGEFI 564 >UniRef50_C2BD69 TraG/TraD family protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD69_9FIRM Length = 679 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 85/472 (18%), Positives = 163/472 (34%), Gaps = 52/472 (11%) Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD----PSIDK-ILNPL 241 N + G G GKS + ++ D SGE ++S+ D + N + Sbjct: 201 NIIVIGGSGTGKSRYFAK--PNLLNANASYIVTDPSGELLQSHGKYLQSMGYDIKVFNLV 258 Query: 242 D-ARCAAWDLWKECLTQPDFDNTANTLI----PMG-TKEDPFWQGSGRTIFAEAAYLMRN 295 D ++ + + +T I P G + DPFW+ + + + +L+ Sbjct: 259 DMDLSHTYNPFSYIRDENGVYQMISTFILNTTPSGQSSSDPFWENAEKMLLTAICFLLYE 318 Query: 296 -----DPNR---SYSKLVDTLLSIKIEK------LRTYLR-----NSPAANLVEEKIEKT 336 D N+ +++++ + EK L + N + L + K Sbjct: 319 SYVDDDGNKIDGTFAEVTRLIGYAIPEKEGKETKLDLIFKEVEKANPESIALFNYRNFKQ 378 Query: 337 AISIRA---VLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 A A V++ + + + + D ++K I +ADT + Sbjct: 379 AAGDTAKSIVISAQARLFPF--SLPKIKNLTSSNDINLETIGERKTALFAILPSADT--T 434 Query: 394 LKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGG 448 ++S+ S L E+R V F DE + K+PD L RK+ Sbjct: 435 FNWIVSLMYSQLFETLYYKAEHRASKSLAIPVRFILDEFANIGKIPDFTNKLATMRKYDI 494 Query: 449 CYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 +Q+ QLE +Y EK SL +T F S E+ + +G K S Sbjct: 495 SCSVILQNLNQLEKMY-EKDHKSLVGNCDTTVFLGSGEKDTMEYFSKILGSTTIYKKSTG 553 Query: 509 YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 S G + S +D+ ++ L++ +I + + +T+ G P Y+ P Sbjct: 554 ESLGRNK---SYSRNEDVIKRELMTPDEIGVMDNELSIITIRGERPFKDEKFPYEKHPMY 610 Query: 569 A----PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDV 616 +NPE+ ++ + + ++ + + Sbjct: 611 KYCGDGGGQELFLNPEVIKEMAKAYEINKELPSNNDEEIKKIDEQLSDYKTI 662 >UniRef50_C5D068 TRAG family protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D068_VARPS Length = 651 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 89/475 (18%), Positives = 168/475 (35%), Gaps = 54/475 (11%) Query: 186 QNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE-FVKS--YYDPSIDKI--L 238 Q L +GK VI L N+ +I D GE F+++ + ++ Sbjct: 133 QGVALEAPPRSGKGVGVVIPNLLNWPGS----AIISDIKGENFMRTAGFRAAHGQQVHLF 188 Query: 239 NPLDAR--CAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 +PL R A W+ P D L P DPFW S R++F A Sbjct: 189 DPLSERERSARWNPLGYVSETPYRCIDDLQRIGTMLFPDPQAGDPFWTSSARSLFLGIAL 248 Query: 292 LMRNDPN--RSYSKLVDTLLSIKIEKLRTY--------------LRNSPAANLVE--EKI 333 + R+ +++ ++ E + + L +L + + Sbjct: 249 YLFETKGATRTLGEILRQGMASDAEGFQKHWKRVIDACERAGYPLSQEAVQSLYDVIDLA 308 Query: 334 EKTAISIRAVLTNYVK-AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 TA SIR T+ + + + + F +R + +++ N D A Sbjct: 309 PTTASSIRKTFTSRLDLWLNPMIDATTSANDFDLR------ALRKHPISIYVQINPDNIA 362 Query: 393 SLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGG 448 L+P+++++ AI R L +V DE P L ++P + + + Sbjct: 363 RLQPLLNLFFQQAIGLQTRELPENNPELRHQVLLMLDEFPALGRIPVIADSTAFLPGYNV 422 Query: 449 CYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 V +QS +QL + YG + A S+ ++ R F ++ AE + E+G + + Sbjct: 423 RAVIIVQSNSQLIEKYGIEGAKSIRKMLAARIVFPPKEYEDAEAISRELGTYTVRQKNIS 482 Query: 509 YS-YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 +G V+ + + L+ +++ L + G P + + Y Sbjct: 483 RPMWGGANKEPTVTISEQ--PRRLLLPQEVKELGPDRMILFYEGLRPVLAHRILYF---- 536 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQP 622 F PR++ P + +L+ A A L + ++ A P Sbjct: 537 RDRLFAPRELPPPLVPKLNVDKPGGAATTVPAAMLDDRKDTSGTGPGSLSNATPP 591 >UniRef50_A5ZXL8 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A5ZXL8_9FIRM Length = 577 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 85/490 (17%), Positives = 161/490 (32%), Gaps = 27/490 (5%) Query: 177 LPIIRDS-EIQNFCLHGTVGAGKSEVIRRLAN-YARQRGDMVVIYDRSGEFVKSY--YDP 232 L + DS +N + G+ G+ KS R+ +RG+ + I D E + Y Sbjct: 76 LSLPVDSRLNRNIAVCGSQGSMKSRAFARVMALQCVRRGESMYITDPKSELYEDLCAYLK 135 Query: 233 SIDKILNPLD----ARCAAWDLWKECLTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIF- 286 ++ L+ AW+ E D + +I K D F+ + Sbjct: 136 EEGYVVKQLNLIQLTHSDAWNCLAEIEDGELIDVFCDVVIRNTTDKFDHFYDNVEMDLLK 195 Query: 287 AEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 A Y+ P +++ + LL+ +E L + P + + + V Sbjct: 196 ALCLYVFEEYPQEQKTFPEAYKLLLNKSVEMLDSIFERLPTDHP-AKGPYQLFSKAEKVK 254 Query: 345 TNYVKAIRYLQGIEHNGEPFTIR---DWMRGVREDQKNGWLFISSNAD-THASLKPVISM 400 N V + I N I D + QK + I+S+ D T+ L + + Sbjct: 255 GNAVLGLGTRLQILQNKMVQQITSHTDIDLSLPGKQKCAYFCITSDQDSTYDMLATLFTS 314 Query: 401 WLSIAIRGLLAMGENR--NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 +LSI + L E R V F DE P + +PD + L AR Q+ Sbjct: 315 FLSIKLVRLADRTEERVLPVPVSFILDEFPNIGVVPDFKKKLATARSRRIGMSILFQNIP 374 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRD 518 QL++ Y + + + F A + + GE AS + ++ D Sbjct: 375 QLQNRYPDNQWEEILGGCDFSIFLGCNDMTTATYYSDRTGEITVSVASIRKNFFTIRATD 434 Query: 519 ---GVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 S + + ++ L+ +I P + + G + Y + + Sbjct: 435 YVPEYSESRSIGKRQLLLPDEILRYPLDQGILIIRGHNVLRFKKMDYTEHADAGKLKMEK 494 Query: 576 DINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKS 635 + + ++ E + + + E+ + Q+P+ + Sbjct: 495 VV--DHIPNWYRKWEKQQQEFQILDEQVYEASDPLEKNENPIKENDVQEPL---TVNGAV 549 Query: 636 DSGVNVPAGG 645 N G Sbjct: 550 QKPKNKKRTG 559 >UniRef50_Q07GJ0 VirD4 protein, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q07GJ0_ROSDO Length = 721 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 82/619 (13%), Positives = 181/619 (29%), Gaps = 59/619 (9%) Query: 99 KYMIWCSEQLWSAFVLAAVVALVICLITFFVVSW-ILGRQGKQQSENEV-TGGRQLTDNP 156 ++ E +A + V LV + + L G + E L Sbjct: 52 PWITGSIEPFKTAALAGGAVWLVSVIAAVAIGYRPQLASHGSARWAEERDLKKAGLVAPL 111 Query: 157 KDV-----ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQ 211 +V A+ + + + + +EI + + G+GK I + Sbjct: 112 AEVQGPVFAKFGSPNKRRAYLT--------STEIPHSLIAAPTGSGKGIGI--VIPTLLT 161 Query: 212 RGDMVVIYDRSGE---FVKSYYDPSIDKIL--NPLDA--RCAAWDLWK------ECLTQP 258 VV D GE + D + P D R ++ + Sbjct: 162 YNGSVVCLDVKGENFETTSRHRAAMGDAVFKFAPYDKDGRTHRYNPIDIVTHVADRRRFT 221 Query: 259 DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTL-----LSIKI 313 + A++LI +K + R IFA + + + + D + Sbjct: 222 EARRLASSLIIAKSKSAEGFLEGAREIFAASVVYAIEQETPTIAAVHDLISQHGQAHSNF 281 Query: 314 EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR---YLQGIEHNGEPFTIRDWM 370 E + + A ++ + A + L+ Y+ + + T + Sbjct: 282 ETMAAKAQAPEAVSIF----NRMASTDIRTLSAYLSVLSDGGLSLWADPAVRDATAQSDF 337 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR--VWFFCDELP 428 ++ ++ + L +I + A+ + V F DE Sbjct: 338 TFTNLRRQPASIYFVVGPNDLDPLSSLIRLMFQQAVAITQREMPKADEPFPVLFLLDEFA 397 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 +L ++ L + + R +GG + +QS + L IYG+ A + + F Sbjct: 398 SLGRMDALSQAITTLRGYGGRLMIIVQSLSNL-QIYGQDGAQNFLANCRLQLFMAPADKD 456 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQ--TLVSYSDIQSLPDLTCY 546 ++ + IG+ S+ D + + + L+ +++ L + T Sbjct: 457 TPDYISRAIGDFTRRARSKS-----WQTNDFMKSNVQEREEGARLIRPEELRKLGEDTIV 511 Query: 547 VTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPD 606 + P +KY ++ P F P E + R + +P Sbjct: 512 ALIQNQDPVRTDKVKYYEDKELCPIF-EAQTGPLPEPPSLFEGDEADTRIRLFVAAHDP- 569 Query: 607 VPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEM--EQQLPP 664 + + + + P + + + + P +P+ + + + P Sbjct: 570 ---GLIDDTEARRKHLPAPDPSSTKEAPAKVILLPPPDAPASPPPSEPDYDASTRKDVGP 626 Query: 665 GISESGEVVDMAAYEAWQQ 683 V + Sbjct: 627 TQPTPAPVATETTNSVPKP 645 >UniRef50_C6XEP7 TRAG family protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEP7_METSD Length = 819 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 107/577 (18%), Positives = 182/577 (31%), Gaps = 86/577 (14%) Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSID 235 I+RD + + + +GK + + +++D E + + Sbjct: 163 ILRDDQKTHILMAAPTRSGKGVGL--VLPTLLSWRYSTLVHDVKMENFALTSGFRHKAGQ 220 Query: 236 KILN----PLDARCAAWDLWKECLTQP-----DFDNTANTLI-PMGTKEDPFWQGSGRTI 285 ILN D A W+ E T D N A + P + W + + Sbjct: 221 LILNFSPTNKDGTAARWNPLDEIRTWSMDDVRDAQNIAAMVADPDAKGMEDHWVSTSYKL 280 Query: 286 FAEA---AYLMRNDPNRSYSKLVDTLLSIKIEKLRTYL---------------------- 320 D R+ + E ++ L Sbjct: 281 LTGVFLHIVYSGKDGERNLPAAAKFIADSSFEDVKQMLSFMLGYEHDPDGRMNWRDESGR 340 Query: 321 --RNSPAANLVE----EKIEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGV 373 + P LV +K EK S+ + + + + F +RD M Sbjct: 341 PTKTHPEVLLVASEMLKKEEKELGSVISSAVTKLGLFSEPIVAMNVAVSDFRVRDLM--- 397 Query: 374 REDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG--------ENRNRRVWFFCD 425 Q +I L+P+ ++ + IR L E R+ D Sbjct: 398 NLTQPVSCYYI-VPPADKERLRPLSRLFFAFVIRRLTEEMKFEGGKSIEGYKHRLLLMID 456 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 ELP+L KL L + L +G V IQ QL+D YG+K S+ + R + Sbjct: 457 ELPSLRKLDVLQDGLAYIAGYGLKAVMIIQDMIQLKDAYGDK--ESVSAGCHIRVAYAPN 514 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDG-VSTGKDMERQTLVSYSDIQSLPDLT 544 + + A + +G+K S S G VS + + L++ S++ LP Sbjct: 515 TMEEARPLSEMLGKKTVEYESRNLSGSRTTHALGQVSLSTQLVGRELMTPSELLELPPSD 574 Query: 545 CYVTLPGPYPAVKLSLKYQTRP------KVAPE------FIPRDINPEMENRLSAV---- 588 + G P LKY P +++P FI + L Sbjct: 575 SIIKAAGFAPIRAKKLKYYEMPVFQSRAEISPPARCSIQFIKDGSVVTLWAMLLVEKDKQ 634 Query: 589 ---LAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGG 645 L + R+ P V V+ E V + + + D + + N P Sbjct: 635 GNLLVWINLKDRE----LLPPVYAVIRQELVDDGQLISKERKFDLIDDQGNIRSNGPF-K 689 Query: 646 IEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQ 682 I + ++ E + + S S +VD AAY+ Q Sbjct: 690 IANKFRLLSRESDDLDMNDEFSVSLRLVDPAAYKQPQ 726 >UniRef50_D0L1A2 TRAG family protein n=4 Tax=Bacteria RepID=D0L1A2_HALNC Length = 823 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 95/598 (15%), Positives = 187/598 (31%), Gaps = 76/598 (12%) Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYD 231 GD+ +R ++ +GK + + ++YD GE + + Sbjct: 158 GDVQYLRHDGPEHVMAFAPTRSGKGVGL--VLPTLLAWRHSALVYDIKGENYALTAGWRE 215 Query: 232 PSID---KILNPLD-ARCAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGS 281 + +P D A+++ E D N ++ P G W + Sbjct: 216 KEANNRIIRFSPTDITGSASYNPLNEVRLGTQREIADIQNLVTMIVDPDGKGMTDHWAKT 275 Query: 282 GRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRN---------------SPAA 326 G + + + V T LS L L + +A Sbjct: 276 GHALLVGTVLHVMYSEEDKTLRGVATFLSDPSRTLEESLAEMINTNHLGDRPHPVVAASA 335 Query: 327 NLVEEKIEKTAISIRAVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFIS 385 + K + + + +++ R + + F + D M ++ L++ Sbjct: 336 RDMMNKADNERSGVLSTAMSFLTLYRDPIVASNTDKSDFAVADLMNA----EQPVSLYLV 391 Query: 386 SNADTHASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLV 437 LKP+I + ++ IR L E R+ DE P+L +L Sbjct: 392 VPPSDKDRLKPLIRLMINQIIRNLTESMEFKDGRSVAGYKHRLLLMIDEFPSLGRLDIFQ 451 Query: 438 EILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEI 497 E L +G Q +QL YG+ S+ + R + + AE + Sbjct: 452 EALAFIAGYGMKAYLITQDLSQLYAAYGKD--ESIMSNCHIRIAYAPNKIETAELLSKMS 509 Query: 498 GEKEHLKASEQYSYGADP-VRDGVSTGKDMERQTLVSYSDIQSLP----DLTC------- 545 G +K E +S G + D +ST ++ L++ + LP D Sbjct: 510 GTTTIIKRQESFSGGRTKLMLDQISTSIQEVQRPLLTPDEALRLPGPQKDGQGNIMEAGD 569 Query: 546 -YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE 604 + + G P + Y P F+ R P R V AA A + + Sbjct: 570 MLIFVAGKAPIYGKQILYFKDPL----FLARAKFPAPNARP--VAAALSAPAHAAVAEID 623 Query: 605 PDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD---SGVNVPAGGIEQELKMKPEEEMEQQ 661 P + + V+P + ++ + ++ + +E M Sbjct: 624 EQTP-----QQPAPLKAAPNSVAPPLGKGQTGVAFAPLSPTSSSENRETSAVQTTPMTAS 678 Query: 662 LPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRR-EEVNIN---VHRERGEDVEPGD 715 ++ + + E + + + + + EE+ + V E +D+ P D Sbjct: 679 TSATLNSATFAPAHSPAEESKPHENITAEPESESHGEEMTADGFAVIPEETQDLLPAD 736 >UniRef50_Q5I734 VirD4 n=1 Tax=Dichelobacter nodosus RepID=Q5I734_DICNO Length = 656 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 84/562 (14%), Positives = 190/562 (33%), Gaps = 68/562 (12%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 Y + F A ++ + L F ++ I ++ + +++T + Sbjct: 66 YQLKYGAHYAGQFKAAWYISGALHLCIFMILVKIFEQKQSLYGDARFATLKEITKAGLLI 125 Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHG--------TVGAGKSEVIRRLANYARQ 211 K+ ++ + G+ I+ + L G +GK + + Sbjct: 126 D--TKQVKENKGLFAGNKIIVGKIGTRYIALGGQLFAYLAAPTRSGKGVGV--VIPVGLS 181 Query: 212 RGDMVVIYDRSGEFVK--SYYDP--SIDK-ILNPLDA--RCAAWDLWKECLTQP-----D 259 +V+ D E + + Y D + +P + R A W+ D Sbjct: 182 YEHSMVVSDIKQELFEITAAYRAQCGHDVYLFDPFNPEGRTARWNPLSYVSRSAEQRVDD 241 Query: 260 FDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN----------RSYSKLVDTLL 309 + A LIP +D F++ S R +F + + +++D Sbjct: 242 LNQIAICLIPDSGGDDSFFEESARKLFLGLGLYCLDKEAFWQKDNLVYVPTIKEILDLAT 301 Query: 310 SIKIEKLRTY---LRNSPAANLVEEKIE-------KTAISIRAVLTNYVKA-IRYLQGIE 358 + + + ++++ + + + I KT SI A LT + + Sbjct: 302 QFSGDAIAHFSSLMQDTFISTIASQTINSAVSAGDKTFASILATLTANLTPWLSQPVSDA 361 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR 418 +G+ F +RD R K +++ + +I+++ S I ++ + Sbjct: 362 TSGDDFDLRDVRR------KKMTIYLGIQPKDLSKASKIINLFYSQLINENTSVLPQNDP 415 Query: 419 RV----WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL--EDIYGEKAAASL 472 + DE ++ L + + + +F QS AQL +YGE ++ Sbjct: 416 DLKYQCLMLMDEGTAAGRIAILEKAVSYMAGYNLRLLFIAQSPAQLADRKVYGEHGTRNI 475 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 + + ++ + +E + +G+ + E S G+S + ++++ L+ Sbjct: 476 LTNIALKILYKPNDVQDSESYSKLLGK---ITVREDTSQSRGGGNRGISRTETLQQRDLM 532 Query: 533 SYSDIQSLPDLTCYVTLPG-PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 +++++P + G +P + Y P FI R N N+ V + Sbjct: 533 MPQELRAMPTTKEIILFEGLSHPIIAEKNCYFKDPV----FIERYKNK---NKPIVVKIS 585 Query: 592 REAEGRQMASLFEPDVPEVVSG 613 + + EVV Sbjct: 586 DRLKKENQHCEVQKIAKEVVRE 607 >UniRef50_Q5ZW42 LvhD4 n=6 Tax=Legionella RepID=Q5ZW42_LEGPH Length = 691 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 84/501 (16%), Positives = 161/501 (32%), Gaps = 67/501 (13%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 ++ + +LW F+ + ++ + + + + N+ G ++ + Sbjct: 174 FLRYQEPELWHLFLTVEGIVFILTFLAIALYLFHWLKP-----NNKALGNAHFSNGFETK 228 Query: 160 ARMLKKDGKDSDIRIG---DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV 216 + S I IG P+ + ++ + G+GK+ I V Sbjct: 229 KAGFFERQDQS-IVIGKKYGAPLYSNG-FEHVLVFAPTGSGKTRSIG--IPNLFNYPYSV 284 Query: 217 VIYDRSGEFVKSY--YDPSIDKILNPLDARCAAWDLWKE-----------------CLTQ 257 V D ++ Y + L RC W E Sbjct: 285 VCNDVKLTLFRTTSGYRERV------LGHRCFCWAPADENRITHCYNPLSLISEDKIQRL 338 Query: 258 PDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS-----YSKLV------D 306 D A+ L+P K DP WQ + R +F A + + P R ++LV D Sbjct: 339 TDIQRIAHILMPDNKKSDPIWQQASRKLFKVAVLYLLDTPERPTTLGEINRLVKQAGFDD 398 Query: 307 TLLSIKIEKLR---TYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQ-GIEHNGE 362 L S+ E + RN + + EKT SI + Y + Sbjct: 399 WLASVLEETNHLDPEFYRN--GYSYLNNH-EKTRSSILETFSGYFELFDDPTIDAATARS 455 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW---LSIAIRGLLAMGENRNRR 419 F +R R ++I D L P+++++ L + + + Sbjct: 456 DFDLRQLRRE------KITIYIGFTDDDMERLSPLLTLFWQQLISVMIKNIPDPVDEPYP 509 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 + DE +L ++ L L R++ V +Q AQ + Y A + F + T+ Sbjct: 510 LLCLIDEFSSLGRIERLRRSLKLLREYRVRCVLIMQYIAQTYEQYTHDEAKA-FTNIKTK 568 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 F + AE+ + +G + ++ S + S L+ ++ Sbjct: 569 IAFATEDIFDAEYVSKLLGTRTVKVSAGSTSTQTQGYSESKSYNYQAI--PLLRPDEVMR 626 Query: 540 LPDLTCYVTLPGPYPAVKLSL 560 LP+ + G P + Sbjct: 627 LPEDQTLIMRTGHAPVKAEQM 647 >UniRef50_Q981R7 Component of type IV secretion system n=1 Tax=Mesorhizobium loti RepID=Q981R7_RHILO Length = 775 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 100/608 (16%), Positives = 185/608 (30%), Gaps = 78/608 (12%) Query: 144 NEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIR 203 R T + +L K G ++G I D + + + G +GK Sbjct: 111 KHYGDARFGTIMDAERKNLLAKQGLILG-KMGGATIRSD-DPAHVLVVGPTRSGKGVSF- 167 Query: 204 RLANYARQRGDMVVIYDRSGEFVKSYYDP-----SIDKILNPLDARCAAWDLWK----EC 254 + V +D E +++ +P + ++ + Sbjct: 168 -VIPNGYMWRGSSVWFDPKRENFEAFGAHRQALGDKVFFFSPGERDSHRYNPLDFIRPDA 226 Query: 255 LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP---NRSYSKLVDTLLSI 311 D ++ +IP T W +GR + + P + + + V LLS Sbjct: 227 RMPTDCAVVSSFIIPEATGSSEIWARAGRQLLTAMIGYVLTSPRYEGQRHLRAVAMLLST 286 Query: 312 KIEKLRTY--LRNSPAANL----------VEEKIEKTAISIRAVLTNYVKAI-RYLQGIE 358 ++ LR +RN L ++T S LT + L Sbjct: 287 GVDFLRVLTNIRNDEEKYLPSWVVQGLNQFIALEKETRNSAYFNLTAALNPWTNDLVAAA 346 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR 418 F I + + LFI + +P+I + + L+A + Sbjct: 347 TASTDFDIS------KLRKDPTALFIGCSVAQLDVFRPIIKILVQQIHDVLMASLPGPDE 400 Query: 419 R--VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 V DE L K+ +V L +G V +Q AQL+++YG+ + Sbjct: 401 PYQVLVMIDEFRQLGKMESIVSKLAINAGYGFRMVLVLQDLAQLDEVYGKATRQTTVSAC 460 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEK--EHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 + F R + +E+ + +G E + G RD + + L + Sbjct: 461 QVKLFIRMNDVETSEYVSVMLGPTTIEVPTPIIRAGQGIFGARD---KSLSYQERPLRTA 517 Query: 535 SDIQSLPDLTCYVTLPG----------PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENR 584 ++++ +P V +P Y YQ + P ++ R Sbjct: 518 AELRQMPAKQAVVLVPSAPGFMVRKVTYYKDAPYKATYQEFRHRRLKVPPLSRWQDLPLR 577 Query: 585 LSAVLAAREAEGRQMA-SLFEPDVPEVVSGEDVT-------------QAEQPQQPVSPAI 630 A + A L EPD E D P P P + Sbjct: 578 SLADVEAAAHTAPAAPFELREPDTVEAPVSGDKAFADAAPPATGAAADGVDPVGPK-PKV 636 Query: 631 NDKKSDSGVNVPAGGI----EQELKMKPEEEMEQQLPPGISES------GEVVDMAAYEA 680 + + + +P+ G+ E E K + E+ +L P ++ + + A Sbjct: 637 DSDSAGASRALPSPGLRASGEAEAKSEDAAEVS-ELKPKRTDQTADNAPRPLPTLGRRSA 695 Query: 681 WQQENHPD 688 N D Sbjct: 696 PAASNASD 703 >UniRef50_D1ATC0 Type IV secretion system protein VirD4 n=53 Tax=cellular organisms RepID=D1ATC0_ANACI Length = 808 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 123/714 (17%), Positives = 226/714 (31%), Gaps = 77/714 (10%) Query: 26 ANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYG 85 +N + L FF + L IS FV W L S + ++ + Sbjct: 5 SNHIRNILVFFFGMFFLLEFCFYISGALFVLSM---WGLEYLDFNALNPSISDFPMRLWP 61 Query: 86 KTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE 145 F D + L AA + +V T F + + + + E Sbjct: 62 TIFNYIHG-WWADPKLYGVPNSLKLWLSFAAPLCIV---GTVFWNLRHILLEWRPFRKKE 117 Query: 146 VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE-------IQNFCLHGTVGAGK 198 G + +D+ ++ + K L + +D Q+ L G+GK Sbjct: 118 ALHGDSRWASERDIRKIGLRSRK-------GLLLGKDQRGYLVADGYQHALLFAPTGSGK 170 Query: 199 SE--VIRRLANYARQRGDMVVIYDRSGE--FVKSYYDPSI---DKILNPL--DARCAAWD 249 VI L + D +V++D E + S + I + NP D ++ Sbjct: 171 GVGFVIPNLLFW----EDSLVVHDIKLENYDITSGWRKKIGQEVYVWNPAQPDGISHCYN 226 Query: 250 LWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR--SYS 302 +P D AN ++P E FW R++F + P + S+ Sbjct: 227 PLDWISKKPGQMVDDVQKIANLIMP----EQDFWYNEARSLFVGVVLYLLAVPEKVKSFG 282 Query: 303 KLVDTLLSIKIEKLRTYLRNSPAANL----------VEEKIEKTAISIRAVLTNYVKAI- 351 ++V T+ S + + ++ + +K +K + + + + ++ Sbjct: 283 EVVRTMRSDDVVYNLAVVLDTIGKKIHPVAYMNIAAFLQKADKERSGVVSTMNSSLELWA 342 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 L F I+++ +K +++ D L+P++ ++ A L Sbjct: 343 NPLIDTATASSDFNIQEF------KKKKITVYVGLTPDNLTRLRPLMQVFYQQATEFLCR 396 Query: 412 MGENRNRR--VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAA 469 + + V F DE PTL K+ + R + IQ QL+ IY E Sbjct: 397 ALPSDDEPYGVLFMMDEFPTLGKMEQFQTGIAYFRGYRVRLFLIIQDTEQLKGIYEEAGM 456 Query: 470 ASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQ 529 S R F + + + A + IG K + S D S ++ Sbjct: 457 NSFLSNSTYRITFAANNIETANLISQLIGNKTVSQESLNRPKFLDLNPASRSLHISDTQR 516 Query: 530 TLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVL 589 L+ ++ LP + + YP +KY + + P E Sbjct: 517 ALLLPQEVIMLPKDEQILLIESTYPIKSKKIKYYEDKFFTKKLLKSTFVPTQEPY----- 571 Query: 590 AAREAEGRQMASLFEPDVPEVVSGEDVT--QAEQPQQPVSPAINDKKSDSGVNVPAGGIE 647 R DVP GE E+ Q ++G + + Sbjct: 572 --DPDAARGGVDTVAEDVPTSEEGEQQAAIAHEESAQEAQQPQEQHGDEAGYDEFGDYPQ 629 Query: 648 QELKMKPEEEMEQQLPPGISE----SGEVVDMAAYEAWQQENHPDIQQQMQRRE 697 ++E + L E +GE +D E E+H + + E Sbjct: 630 DYDYSSEDDEYMEGLDDIEGEDVPLNGEGLDDIGDEDGYPEDHVSDEGHPEEDE 683 >UniRef50_B9D155 VirD4 n=1 Tax=Campylobacter rectus RM3267 RepID=B9D155_WOLRE Length = 646 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 109/659 (16%), Positives = 220/659 (33%), Gaps = 94/659 (14%) Query: 47 IKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSE 106 +K+ + W + + ++ V ++ + + A + K +I Sbjct: 1 MKMDSSKEFTAKRWAWAFFVSLIMGVVLYLAVVKVIFNPDLINVPA---VAYKILINIGA 57 Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD 166 A+ L+ + F +W L + + E G + P+D +M Sbjct: 58 PTLKLKAYVALFTLIAPFLVVF--TWWLLPYFR---DGEDYGSARFA-TPEDFPKMNINY 111 Query: 167 GKDSDIRIGDL-----PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDR 221 + ++ +R ++ + + G+GK+ + + + V D Sbjct: 112 KNGLVLGCHNIDSDNPQFLRATQPLSTLVVAPPGSGKTAGM--IIPNLLSVLNSCVTLDI 169 Query: 222 SGEFVKS-------YYDPSIDKI----------LNPLDARCAAWDLWKECLTQPDFDNTA 264 GE K Y++ I NP D R D+ + + + A Sbjct: 170 KGELYKKTAGYRQKYFNNEIQLFSPFSWDNTLFFNPFD-RSIVKDM-EYIHIKKLAEQIA 227 Query: 265 NTLI-PMGTKEDPFWQGSGRTIFAEAA-YLMRNDPNRSYSKLVDTLLSIKIEKLRT---- 318 +T+ E+ W S RT+F A Y M+ D + + ++L + E L Sbjct: 228 STIFVGEKGNENDHWIVSARTMFVFFAEYFMQRDRHATLAQLAQAPKADYFEYLDEKFGE 287 Query: 319 --------------------------YLRNSP-----------AANLVEEKIEKTAISIR 341 +L+ + A + SI+ Sbjct: 288 EAMKEIDEDDPDKERERDYDVDTFKIWLKQTSFDESIDESTRNQARAYARAADNEFASIK 347 Query: 342 AVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 + ++K Q + FT D K +++ + L P+I + Sbjct: 348 STYDTFMKVFSNPQVASATSKMSFTFEDL------RAKRISMYVVVQTEDIDILAPLIRI 401 Query: 401 WLSIAIRGLLAMGE--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 ++ + L++ E + R ++FF DE K+P L+E R +G VF QSY Sbjct: 402 FIETLFKKLMSGQECSDPERFIYFFGDEFVRFGKMPFLLEAPALCRSYGLLPVFVTQSYE 461 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRD 518 Q++ YGE + + F S K AE + IG+ ++K S+ + Sbjct: 462 QIKKYYGEDDMNIVKNNSGYHVIFNMNSDKDAEDTSKLIGDYTNIKISKSQ---GNMELF 518 Query: 519 GVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP-AVKLSLKYQTRPKVAPEFIPRDI 577 + K E + LV+ D+++ + + G Y +K + Y K+A + Sbjct: 519 KSNISKSKEAKKLVTAQDLKNQDSSDILILVKGFYKMPIKAKVPY--WFKMAQWKGADKL 576 Query: 578 NPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD 636 E + + A ++ + S E + E + E+ Q + ++ + Sbjct: 577 EVEAKAEPNEATAPQDVHVAKKGSGKEAEG-EAKTAENNANLNQSGINPADEKKQQRDE 634 >UniRef50_Q4EJ40 Tn5252, Orf 21 protein, internal deletion, putative n=2 Tax=Listeria monocytogenes RepID=Q4EJ40_LISMO Length = 452 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 73/414 (17%), Positives = 150/414 (36%), Gaps = 43/414 (10%) Query: 229 YYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKE--DPFWQGSGRTIF 286 + + ++ ++ ++L D + + T+ TK+ + F+ + + Sbjct: 3 FKLRNRTYQIDFINFNQDNYNLLDYVFDDQDAQSVSVTIAKNSTKDGKEDFFMERAQKML 62 Query: 287 AEAA-YLMRNDPNRSYSKLVDTL---LSIKIEKLRTYLR-----NSPAANLVEEKIE--- 334 A Y PN S +++ ++ E R ++ + PA +L++ Sbjct: 63 AGLIVYCKTEIPNASMQDVLNAFNEYVAPDEESFRNWVDEDLGPHHPAYHLLKGLTTLGG 122 Query: 335 KTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 T S+ + + V + E F R++ ++ L++ D Sbjct: 123 NTRTSVTSSFASQVSIFTLKKISEMTRTSDFNFREFQ------EQKSILYVKLPMDE-NP 175 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRV----WFFCDELPTLHKLPDLVEILPEARKFGGC 449 + S++ I M + ++ F DE P + K+ +L R G Sbjct: 176 FTALTSVFFDQLIAQFYKMADENRGKLKIPTIFLLDEFPNIGKIDKYGRVLATCRGLGLS 235 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 +Q Q+E +YG++ A S+ +T F RS + ++ + GE + Sbjct: 236 MNTIVQDNGQIESLYGKEMARSILSNHDTLLFLRSKDMETIKYFSQLAGETTAKVQTGSS 295 Query: 510 SYGAD----PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR 565 S ST + +++L+S D+ S+ CY+ + G YP L L+ + Sbjct: 296 SQSGGFMSGKSSSSQSTSEQYVKRSLISEGDLASIAKNDCYLFVSGLYP---LKLQKAWQ 352 Query: 566 PKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQA 619 +V +++ R E V A + E A+ +P VP+ E Sbjct: 353 AEVFGDYVERHTASE------PVTNAVKKE----AAFTQPPVPKATDTETNANG 396 >UniRef50_B4WVQ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WVQ4_9SYNE Length = 581 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 87/485 (17%), Positives = 160/485 (32%), Gaps = 58/485 (11%) Query: 185 IQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRS-GEFVKSYYDPSIDK-----I 237 + + G G+GKS V A +G ++ D K+ + D I Sbjct: 120 ARGTSIIGGAGSGKSFTVTIPTLRSAIAQGLSTMLLDTDYPGLTKTIAPLAEDLGYEVSI 179 Query: 238 LNP---LDARCAAWDLWKECLTQPDFDNTANTLIP-------MGTKEDPFWQGSGRTIFA 287 P A C DL C A TL+ + D F+ +G Sbjct: 180 FAPGYKESAVCNVVDLIYNCRDATGASQVAKTLVKNFQMAATDASSTDAFFGPAGELATE 239 Query: 288 EAAYLMRNDPNRSYSKLVDTLLSIKI-------EKLRTYLRNSPAANLVEEKIEKTAISI 340 A L + L + K+ +L + L K E+T SI Sbjct: 240 AALLLAKALKYPDILTAYTILKDEDMISRVRGVSKIDPWLDLAFGQLLSTAKSERTVDSI 299 Query: 341 RAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 R + + TI + G + + + + P+I+ Sbjct: 300 RGTAALLFGQLMRPDILPSLVGKTTIPLDITGRK------LIIFGVKQNIRLVVSPLIAS 353 Query: 401 WLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 ++ + + R ++ DE+P+++ P++ E L E RK+G C G QS QL Sbjct: 354 VINALVSRNVL--HGRKEPLFLSLDEMPSMY-FPEIAEWLSEKRKYGLCTQIGYQSLGQL 410 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 YG+ A ++ T+ FF S + A+ + +GE++ + ++ +YG R Sbjct: 411 RKTYGKDQADVIYTNTATKFFFNPQSLESAKTFSETLGEQDVVYKTKNRTYGRPRTR--- 467 Query: 521 STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPE 580 + ++ L++ + + + C + PG FIP P Sbjct: 468 --TEHRTKKRLMTPDEFMNQAEGCCVLLSPG-------------YGTKTERFIPVRFQPL 512 Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQ-----QPVSPAINDKKS 635 + L ++ + + + V E + Q P I K + Sbjct: 513 KIAD--SELEIQKMVEESWETFLSEKERTGIGNKQVAPDEISKRIDDFQNRLPIIKSKTN 570 Query: 636 DSGVN 640 S ++ Sbjct: 571 ASPLD 575 >UniRef50_A5N4W3 Plasmid transfer factor-related protein n=133 Tax=Bacteria RepID=A5N4W3_CLOK5 Length = 610 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 104/620 (16%), Positives = 209/620 (33%), Gaps = 84/620 (13%) Query: 67 EGMRDLIKSQPVYEIQYY----GKTFRMNAAQVLHDKYMIW------CSEQLWSAFVLAA 116 + R +I + P + ++ G +R+ A +K + FVL+ Sbjct: 4 KIRRYVIPNVPYLLVLWFCLKLGTAYRLAAGADFGNKLVGMIKTISPAFASFAPGFVLSD 63 Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD 176 + + + +V W + K+ + V G KD+ + ++ I G Sbjct: 64 WLIGLAGAVILRLVVWYKVKNAKKFRRD-VEYGSARWGTAKDIKPFIDPKFSNNVILTGT 122 Query: 177 --LPI------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG---EF 225 L + ++ N C+ G+ G+GK+ L Q V+ D G E Sbjct: 123 ELLTMNTRPANPANARNLNCCIIGSSGSGKTR--FWLTPQLLQAHSSYVVVDPKGGILEQ 180 Query: 226 VKSY--YDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTANTLIP----MGTKEDPFW 278 V S+ K+ N +D AR ++ T+ D N LI G + DPFW Sbjct: 181 VGSFLKKQGYKIKVFNSIDFARSMHYNPLAYLKTESDILKFVNALIENTKGDGKEGDPFW 240 Query: 279 QGSGRTIFAEAAYLMRNDP---NRSYSKLVDTLLSIKIEKLRTYLRNSPAANL------- 328 + ++ + + R + LVD L S++ + +N+ Sbjct: 241 TKAETLLYCALIGYIVLEGPEEERHINTLVDMLNSMETREDDENFKNAVDYMFLGLEKRN 300 Query: 329 -----------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQ 377 + KT+ SI + I E + + D+ Sbjct: 301 PNHFAVRQYKKFKLASGKTSKSILISCGARLAPF----DIGQLREIMSYDEMELDRMGDK 356 Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR-----NRRVWFFCDELPTLHK 432 K FI S DT+ + ++++ S L +++ V DE + Sbjct: 357 KTATFFIIS--DTNTTYNFIVALAFSQMFNLLCERADSKYGGRLPHHVRVLWDEAANTGQ 414 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 +P L +++ R +Q+ +QL+ +Y + A ++ M++ F H + Sbjct: 415 VPQLEKLVAVIRSREISLCLFLQAQSQLKALY-KDHAETIMGNMDSVIFLGGREHSTIKE 473 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMER--QTLVSYSDIQSLPDLTCYVTLP 550 + +G++ +E + G S G++++R + L++ ++ ++P C + L Sbjct: 474 LSEVLGKETISMQTESRTRGQSE-----SYGQNLQRLGKELMTMDELTTMPGNKCILQLR 528 Query: 551 GPYPAVKLSLKYQTRPKV-------------APEFIPRDINPEMENRLSAVLAAREAEGR 597 G +P + + P A + + R + N V E Sbjct: 529 GLHPFLSPKYDLKQHPNYRYTAEADKRNAFDASKLVNRRMKKLNPNEQYTVYEVNADEET 588 Query: 598 QMASLFEPDVPEVVSGEDVT 617 E + + Sbjct: 589 AAIDENEDILNYDDVDDPEA 608 >UniRef50_Q2ESM6 Hypothetical conjugation protein n=6 Tax=Bacillus thuringiensis RepID=Q2ESM6_BACTU Length = 638 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 92/585 (15%), Positives = 193/585 (32%), Gaps = 96/585 (16%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN-----EVTGGR 150 L +I+ L ++ ++ ++ W R K + +N E +GG Sbjct: 32 LTTFSVIYPWVILKQSYGTFYLILQGFVATAIVLIIWKENRGIKNKMKNGIGGPEASGGG 91 Query: 151 QL------TDNPKDVARMLKKDGKDSDIRIGDLPIIRD---------SEIQNFCLHGTVG 195 Q T+ +D + K K+ I+ + + D SE ++ + GT G Sbjct: 92 QFGTSRWQTEKERDANNSVWKYEKE-PIKTAGIVLGADLKKKKVWLVSEDEHTLIIGTTG 150 Query: 196 AGKSE-VIRRLANYARQRGDMVVIYDRSGEF---VKSYYDP-SIDKILNPLDAR-----C 245 +GK+ +I + G+ +++ D GE K + + + I+ LD R Sbjct: 151 SGKTRRIIYPAIWTLAKAGESMILTDPKGELYAATKKFLEEQGYEVIM--LDFRKPKAST 208 Query: 246 AAWDLW----------KECLTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLM- 293 W+ E N AN ++ DP W ++ A + Sbjct: 209 HHWNPIKAVVDALKEDDESKASEAAWNIANMIVYQKERTGDPVWATGAESVIAALILYIA 268 Query: 294 ---RNDPNRSYSKLVDTLLSIKIEK--------------LRTYLRNSPAANLV------- 329 + D + + + L+ + K L + + +L Sbjct: 269 IESKKDSQKHMASVFQLLVEYGVVKKREIGDGMMEEYVPLLELIESLERGHLAKLAFATA 328 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNAD 389 EK S A + ++ + +D ++K I D Sbjct: 329 GMAPEKMRGSFFASVAADLRLFADPSIAYMT----SFQDHDLKQPGEKKTATFLII--PD 382 Query: 390 THASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEAR 444 + + ++++ L+ + +R R DE + ++ D + +R Sbjct: 383 EVKTRHFLATLYIDQTYFELVNLANSRPEGRIAIRTSCLLDEFGNMPRISDFDTKITVSR 442 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 G Y +Q Q+++ YG+ A ++ + + ++ AE + ++G Sbjct: 443 SRGVRYNIVVQGLDQIKEKYGK-LANTITGNCRVWLYLLTGDNETAEVISKKLGTYTV-- 499 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV--------TLPGP---- 552 A++ YS S +++ ++ L++ ++ PD V +P P Sbjct: 500 ATDGYSATTRTKDFSASYSQNLSKRELLTPDEVMRFPDFEAIVIRQRQYATRVPTPDISK 559 Query: 553 YPAVKLSLKYQTRPKVAPEFIPRD-INPEMENRLSAVLAAREAEG 596 YP + ++ K F D + E L A+ A + Sbjct: 560 YPIKFIPIERGDLEKKDIRFDVFDPFKAQWEGELEAIEKANKTND 604 >UniRef50_O87219 TrsK protein (TraK) n=9 Tax=Lactobacillales RepID=O87219_9LACT Length = 530 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 78/529 (14%), Positives = 164/529 (31%), Gaps = 77/529 (14%) Query: 185 IQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGEFVKS-------------- 228 +N + G G+ K++ VI L N + + +V+ D GE + Sbjct: 23 NRNVMVIGGSGSYKTQSVVITNLFN---ETKNSIVVTDPKGELYEKTAGIKLAQGYEVHV 79 Query: 229 --YYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM--GTKEDPFWQGSGRT 284 + + + NP D ++ A ++ + W + R Sbjct: 80 VNFANMAHSDRYNPFDY----------IERDIQAESVATKIVQSENAEGKKDVWFSTQRQ 129 Query: 285 IFAEAAYLMRND---PNRSYSKLVDTLLS-----------IKIEKLRTYLRNSPAANLVE 330 + + + R+ + +++ L + ++ L L+ + A + Sbjct: 130 LLKALILFVMKERSPEQRNLAGVINVLQTFDSEPINKDENSDLDNLFLALKITHPARIAY 189 Query: 331 EKIEKTA-----ISIRAVLTNYVKAIRYLQGIEHNGEPF-TIRDW-MRGVREDQKNGWLF 383 E K A SI + L + + F +I D+ ++ + + ++ Sbjct: 190 ELGFKKAKGDMKASIISSLLATISKF-----TDEEVSNFTSISDFHLQDIGRKKIVLYVI 244 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR----VWFFCDELPTLHKLPDLVEI 439 I +T+ S I+++ S L + + + V F DE L K P E Sbjct: 245 IPVMDNTYESF---INLFFSQMFDELYKLASSNGAKLPQEVDFILDEFVNLGKFPKYEEF 301 Query: 440 LPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGE 499 L R +G Q+ QL+ +YG++ A S+ + + + A++ + +G+ Sbjct: 302 LATCRGYGIGVTTICQTLTQLQSLYGKEKAESILGNHAVKICLNASNEATAKYFSELLGK 361 Query: 500 KEHLKASEQYSYG-ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL 558 + S + S + L++ +I +PD + P Sbjct: 362 STVKVETGSESTSHSKETSTSKSDSYSYTSRQLMTPDEIIRMPDTQSLLIFTNQKPIKAT 421 Query: 559 SLKYQTRPKVAPEFIPRD------INPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVS 612 A + + I + + L+ + E Q E Sbjct: 422 KAFQFKLFPDADSKVKLEQNKYVGITSKSQLEKYNDLSVKWEEKLQSLKNITVTEEEEKD 481 Query: 613 GEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQ 661 +D ++ + D+ E E K EE Sbjct: 482 LQDNIDSDLEAMNNE----NSGVDNSTTETDKIAETEAKEVQAEEKNFD 526 >UniRef50_A5EUP0 Putative type IV secretory pathway protein VirD4 n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EUP0_BRASB Length = 648 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 84/476 (17%), Positives = 149/476 (31%), Gaps = 51/476 (10%) Query: 186 QNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSG---EFVKSYYDPSID--KIL 238 ++ ++ AGK VI L N+ D VV+ D + + + Sbjct: 133 EHVLVYAPTRAGKGVGYVIPNLLNWP----DSVVVLDVKKENWDRSAGFRAAHGQEVYLF 188 Query: 239 NPLDAR--CAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 +PL+ A ++ + P D A L P T+ DPFW + R+ F Sbjct: 189 DPLEEHGCTARYNPLGYVRSDPADLYDDLQRIAVMLFPAETRGDPFWFEAARSAFVAIGG 248 Query: 292 LMRNDPNRSYS--KLVDTLLSIKIEKLRTYLRNSPAANLVEE----------------KI 333 + P S + +++ L + L+ + AA Sbjct: 249 YVAETPGLSLTIGEILHQLSAAP--DLKAHFEKIIAARKFGSSPLSRHCIAALNDFLAAS 306 Query: 334 EKTAISIRAVLTNYV-KAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 E T S+R +T + + F +R QK +++ D Sbjct: 307 ENTMNSVRKTVTARLGLWLNPRIDAATTTNDFDLRHL------RQKPMSIYLGVTPDNLD 360 Query: 393 SLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGG 448 + P+++++ + R L NR+V DE P L + L + +G Sbjct: 361 RMAPLLNLFFQQVVDLNTRELPEQNPKLNRKVLLLLDEFPALGNVNVLARSVAFIAGYGI 420 Query: 449 CYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 + IQS AQL IYG A + F +A + IG S Sbjct: 421 RLLTVIQSPAQLRGIYGIDTARNFMTNHAVEVVFAPKEQDVANELSERIGYDTVKARSRS 480 Query: 509 YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 G + + R+ L+ +++ LP ++ G P + + Y Sbjct: 481 GPKGLAMRSTSETISE--HRRALMLPQELKLLPKTKAFILGTGIPPIIADKIVYYEDKAF 538 Query: 569 APEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQ 624 +P R +A+L A E R + ++ Sbjct: 539 LRRLLPAPTPEMPNGRSNALLDAEIKELRSAVAELRAAFRSRPMTDEEVADPSTIP 594 >UniRef50_A8ZPM8 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPM8_ACAM1 Length = 597 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 94/488 (19%), Positives = 178/488 (36%), Gaps = 51/488 (10%) Query: 186 QNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSG-----------EFVKSYYDPS 233 ++ G+ G+GKS ++ L + G + ++D G + Y Sbjct: 115 EHLVALGSTGSGKSYSLLNPLQRCMIKLGYPLAVFDAKGHEESETSTCPSSEIAGYARLH 174 Query: 234 --IDKILNPLDARCAAWDLW--------KECLTQPD-----FDNTANTLIPM-GTKEDPF 277 KI+ P ++++ +E D + + L D F Sbjct: 175 GYKVKIIAPGYDDSDVFNIYQMIRSRFGREAYEDKDGAGVVAEVLSENLAKTAADNGDEF 234 Query: 278 WQGSGRTIFAEAAYL-MRNDPNRSYS---KLVDTLLSIKIEKLRT-----YLRNSPAANL 328 + + + + L + DPN ++ L++ ++ I +R+ YLR+S + L Sbjct: 235 FPLAAKQLLQSVFLLALYLDPNANFVLAFYLLERIVEIGAAGIRSLDLPPYLRSSFSQYL 294 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNA 388 EK +T SI + + T+ E + + N Sbjct: 295 ASEKSAETGASIAGTTLLQFNRMFTPANVSTFCGDSTVD------LEIKGKTLVIFRLNP 348 Query: 389 DTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGG 448 + AS+ P+I+ +I L R + + FF DE + KL + E+ R G Sbjct: 349 ELKASVGPMIAT--TIQCFMLANAYRARTQPLGFFLDECQMI-KLCGVQEMQTVTRSNGV 405 Query: 449 CYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 +VF Q ++ L+ YGEKAA L + T+ + +++ AE+ + + G+KE S+ Sbjct: 406 FFVFASQGFSFLKGTYGEKAAMGLIEGCKTQVIGQLNANEPAEYYSKQFGQKEIKSQSKS 465 Query: 509 YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 S G + + LV ++ LP Y + K++ V Sbjct: 466 KSKGKHSSSSESN---QPHLKDLVPLQELLGLPQGQFYYLNR-AFRNKKMARIPVLYETV 521 Query: 569 APEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 P++ ++I + AR A + +A E V + +P+Q S Sbjct: 522 IPQWEQQEIKQGISEWYRYRRVAR-ANSKALAKTDEELVRYQTRAREALPEPEPEQQQSS 580 Query: 629 AINDKKSD 636 + D S+ Sbjct: 581 SPQDDGSE 588 >UniRef50_A5VH50 TRAG family protein n=2 Tax=Alphaproteobacteria RepID=A5VH50_SPHWW Length = 670 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 96/576 (16%), Positives = 180/576 (31%), Gaps = 67/576 (11%) Query: 99 KYMIWCSEQLWSAFVLAAVV--------ALVICLITFFVVSWILGRQGKQQSENEVTGGR 150 M + W + + AL+ I F ++ IL R E Sbjct: 44 PRMQISAIPAWLWYYRGDPLLHLWLKRGALISGAIAFVILLIILKRGRTLHGEARFARES 103 Query: 151 QLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANY 208 ++ + K + ++ L AGK VI L ++ Sbjct: 104 EIRREHLRSNSGIIVGQKGGRYLVFG-------GTEHVLLEAPTRAGKGVGVVIPNLLSW 156 Query: 209 ARQRGDMVVIYDRSG---EFVKSYYDPSID--KILNPLDA--RCAAWDL--WKECLTQPD 259 A D VV+ D + + + +PLD R A ++ + + L D Sbjct: 157 A----DSVVVLDVKRENWDITAGFRARHGQAVYLFDPLDPEGRSARYNPLSFIDRLDDTD 212 Query: 260 FDN----TANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN--RSYSKLVDTLLSIKI 313 N L P K DPFW + R F L+ +P + ++ L + Sbjct: 213 VINELQKIGGMLFPAPEKADPFWAEAARAAFVGVGALVAANPALPFTIGEIYRRLTAGDP 272 Query: 314 E-KLRTYLRNS------------PAANLVEEKIEKTAISIRAVLTNYVK-AIRYLQGIEH 359 + +L + + A + + T I+ +T+ + + Sbjct: 273 KVELPKVVEEAQQRGQRLSQACVSALSDFTSASDNTFSGIKQTITSKLNLWLNPYVDAAT 332 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA-MGENRNR 418 + F +R R +++ + D + PV +++L I + EN R Sbjct: 333 SETDFDLRQVRRE------RISIYLGVSPDNIDRIAPVYNLFLQQLIDLNTRELPENGGR 386 Query: 419 -RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 V DE L K P + +G + IQS +Q IYG + Sbjct: 387 VPVLILLDEFARLGKAPVIASAFSYVAGYGLRLLPVIQSRSQPRGIYGVDVTDEIIANCG 446 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 F K+A + +G S+ + + S + +R+ L+ ++ Sbjct: 447 LEIVFTPKELKVASELSERLGYFTMNVKSKSRTI--HGLLANRSISESDQRRALMMPQEL 504 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN-PEMENRLSAVLAAREAEG 596 +P + G P ++Y + F R + P++ R A+ A A Sbjct: 505 MQMPKGELLLMRGGIPPVRGRKIEYF----RSKRFTSRISDPPKVAPRPIAINAMSSATK 560 Query: 597 RQMASLFEPDVPEVVSGEDVT--QAEQPQQPVSPAI 630 + + + +S + +Q P A Sbjct: 561 LAGEASSSDPLAQALSAKKAALLSDDQATAPTERAE 596 >UniRef50_C8W0M1 TRAG family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0M1_DESAS Length = 511 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 78/430 (18%), Positives = 148/430 (34%), Gaps = 28/430 (6%) Query: 166 DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS--EVIRRLANYARQRGDMVVIYDRSG 223 DGK + G P S + + G G+GK+ VI + + +VI D G Sbjct: 27 DGKIIRVIPGKAPKGMPSLAGHAAIFGGTGSGKTYSFVINNIISSV-ADEQSIVIIDPKG 85 Query: 224 EFVK--------SYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED 275 E + Y+ I + NP A W+ E + + + I K+D Sbjct: 86 ELAEITSAWLKSKGYEVKIFNLSNP--AFSNRWNPILESVDDAEISEMSACFINNAAKDD 143 Query: 276 P-FWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLRNSP----AANL 328 ++ + L++ + + + + V +L S E L + + + Sbjct: 144 SGYFVSKEIQLLEALVGLLKGEFPQEQKHMRAVMSLTSWDKEDLDVRFKTAYQTGKISAT 203 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNA 388 + E+ +A + + + A + E + ++ G +K + Sbjct: 204 IYERWRGSASANYDHAVSGLSAKLKILTTEPLAALLSEQEINLGDVGQKKTALFCVLPVR 263 Query: 389 DTHASLKPVISMWLSIAIRGLLAMGENRNR----RVWFFCDELPTLHKLPDLVEILPEAR 444 + LKP++S + + L + + NR V DE + ++P EI+ AR Sbjct: 264 GENKVLKPILSTFYLFLFKRLYELADRNNRKLPVPVRMLLDEFANIGQVPGFSEIISTAR 323 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR--SPSHKIAEFAAGEIGEKEH 502 G F +Q +QL+D+YG A ++ T + AE + +G+ Sbjct: 324 SLGIHIQFILQGRSQLDDVYGRDEAKNILANCPTILLLGVAPGDMETAEMFSSILGKVAV 383 Query: 503 LKASEQYSYGADPVRDG--VSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL 560 E V K + +L+ +I L L C + YP + Sbjct: 384 EGKFESEDLTVPLVHHFKLAEKTKKTAKISLMEPDEIIRLHPLECIALVQWCYPLRMKKV 443 Query: 561 KYQTRPKVAP 570 + P+ Sbjct: 444 GWDKLPQAKE 453 >UniRef50_Q1JB76 TraG/TraD family n=13 Tax=Bacteria RepID=Q1JB76_STRPB Length = 597 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 77/510 (15%), Positives = 168/510 (32%), Gaps = 59/510 (11%) Query: 102 IWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR 161 I + +V +++ L+ + + I K E G + + + Sbjct: 45 IAMNNPFHITVCEDSVKTVLLFLLAYGMGIGIYLSTRKNYRRREEHGSAKWGNASAINKK 104 Query: 162 MLKKDGKDSDIRIGDLPII----RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVV 217 K+ + + ++ I + N G GAGK+ + A Q +V Sbjct: 105 YQDKNPSANKLLTQNVRIGLDGKKHRRNLNILCCGGSGAGKTRFFCK--PNAMQCNTSMV 162 Query: 218 IYDRSGEFVK--------SYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP 269 + D GE V+ Y+ + ++N + ++ + D L Sbjct: 163 VLDPKGEIVRDVGGLLEKKGYEVRVLDLINMH--KSHCYNPFVYLKNDNDVQRLVTNLFK 220 Query: 270 MGT-----KEDPFWQGSGRTIFAEAAYLMR---NDPNRSYSKLVDTLLSIKIEK------ 315 T +DPFW + + + ++ +++ +++ L + ++ + Sbjct: 221 ATTPKGSQSQDPFWDTAASMLLLSLVFYLKYEAPRDEQNFPMVMELLRAGEVHEDDDSYI 280 Query: 316 --LRTYLRNSPAANL----------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP 363 L N KT SI+ L ++ + Sbjct: 281 SPLDELFDRLEMENPDHIAVKYYKDYHSGSAKTLKSIQITLAARLEKFNL-----ESVAA 335 Query: 364 FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR---NRRV 420 T D + +K LF D S ++S+ + + L + +++ + V Sbjct: 336 LTATDELDLPSLGEKKVALFALI-PDNDTSFNFLVSILYTQIFQQLFYLADHKYGGSLPV 394 Query: 421 W--FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNT 478 F DE + D +IL R G +Q+ AQL+ ++ EK S+ + Sbjct: 395 HCHFIMDEFANVSLPDDFDKILSVMRSRGVSVSIILQNLAQLKALF-EKQWESICGNCDE 453 Query: 479 RAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDG-VSTGKDMERQTLVSYSDI 537 + ++ + +G++ + +YG R G ST + + L++ ++ Sbjct: 454 FLYLGGNEQSTHKYVSELLGKETI----DTNTYGKSSGRSGNYSTNYQISGRELLTPDEV 509 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 + L + + + G P + L P Sbjct: 510 RMLDNRYALLFIRGERPVMDLKYDILKHPN 539 >UniRef50_C6BT46 TRAG family protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BT46_DESAD Length = 648 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 91/610 (14%), Positives = 188/610 (30%), Gaps = 94/610 (15%) Query: 91 NAAQVLHDKYMIWCS------EQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN 144 A + + +MI+ + + +++ V I + + GK + + Sbjct: 53 TAYEQFYWPWMIFNWVKIVQPSEYLDRIISTSLIIFVAPQILVLGLVALFS--GKPKGVD 110 Query: 145 EVTGGRQLTDNPKDVARMLKKDG--KDSDIRIGD------LPIIRDSEIQNFCLHGTVGA 196 ++ G + + +KK G + S + +G L +R + ++ + Sbjct: 111 DIHGTAHWAE-----KKEIKKAGLLEGSGVYVGGWQDKKVLRYLRHNGPEHIMAFAPTRS 165 Query: 197 GKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKI--LNPLD--ARCAAWD 249 GK + + ++ D GE + K+ +P D A ++ Sbjct: 166 GKGVGL--VLPTLLSWEGSTIVLDIKGENWALTSGWRKAQGHKVMKFDPTDTTGSSARYN 223 Query: 250 LWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAY------------ 291 E PD N A+ ++ P G +W + + Sbjct: 224 PLSEIRLGGPHAIPDAQNIASMIVDPDGKGLRDYWNKAAFSFLGGTILHCLIYFRINAGT 283 Query: 292 --------LMRNDPNRSYSKLVDTLLSIK-IEKLRTYLRN-----------SPAANLVEE 331 LM D NR S+L + +L+ + +L A E Sbjct: 284 HATLNDLSLMLADENREMSELFEEMLNEDHVAQLEELFGEEMDHDSKVAIRKFIAAAARE 343 Query: 332 KIEKTAISIRAVLTNYVKAIRYLQGI----EHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 + K + V++ V + + +G F I D M ++ L++ Sbjct: 344 MLNKADAELSGVVSTAVANMALYRDPVVSRSTSGCDFRITDLM----NSEQPVSLYLVIR 399 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLVEI 439 L+P++ + L+I +R L E R+ DE +L K+ Sbjct: 400 PSDIDRLRPLVRLILNIVLRRLTEEMEFSNGAVKAGYKHRLLLMLDEFTSLGKMEIFERA 459 Query: 440 LPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGE 499 L +G +Q QL+ YG++ S+ + R + + A+ + GE Sbjct: 460 LAFMAGYGIKAYIIVQDLTQLQSAYGKE--ESIMSNCHLRMAYAPNKIETAQVLSKMTGE 517 Query: 500 KEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP----DLTCYVTLPGPYPA 555 ++ S + ++ L++ + LP D +T G Sbjct: 518 ATVVQRKTSISGTRAGRLSRANVSVSEAKRALLTPDECMRLPGAEKDHNGMITKSGDMLI 577 Query: 556 VKLSLKYQTRPKV----APEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVV 611 ++ P+F+ R P + E ++ E + Sbjct: 578 FPAGFAPIYGKQILFFLDPKFLERSKIPAPDKSDKLNEQIEETPAPNEPAIDLDAEMEEL 637 Query: 612 SGEDVTQAEQ 621 V + E+ Sbjct: 638 EEGTVYEDEE 647 >UniRef50_B8HZ08 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HZ08_CYAP4 Length = 562 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 89/573 (15%), Positives = 176/573 (30%), Gaps = 62/573 (10%) Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 A + LV L ++V G+ + S T + + + + Sbjct: 28 YAKPLVLVAVLGIVWLVLAYRGKPKLKDSAAWATRDHVRRCRYLVAKQNIIGGKDNVGLE 87 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYD-----RSGEFV- 226 +G + + + G GKS + + ++ D ++ + V Sbjct: 88 LGS-NLPLYDAVTSLISIGAPKTGKSFSAVLSALYAHLKLNYPAILVDVQYPVQTEQMVC 146 Query: 227 ---KSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTL-----IPMGTKEDPFW 278 + Y I P W++ E N A L D F+ Sbjct: 147 LARQLGYAAEDIHIFAPGCPESGIWNI-CEYAQGSHAANLAKMLNDNFATSGSQGGDRFF 205 Query: 279 QGSGRTIFAEAAYLMRNDPNRSYSKLVDTLL---------SIKIEKLRTYLRNSPAANLV 329 +G + + L R P + +L + +++ ++ + L Sbjct: 206 DPAGEALISAVLQLARTIPGLNDVVGAQAILGLSELPKRVRLNEDRIDPWVYRAFMQLLS 265 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNAD 389 EK EKTA SI + +N K + ++ G + L + +D Sbjct: 266 TEKSEKTAASIAGIASNLFKRFTEQDIAPALVGQTSFPLFLDGAK------LLILGVRSD 319 Query: 390 THASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 + P+ LS+ + + R + + DEL L + E RK+G Sbjct: 320 LREVIMPIQMALLSLLVD--INSVPTRKKPLQICFDELAA-ATYRSLPSRINENRKYGVY 376 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 + Q+ +QLE+ YG+ ++ T+ F + AE + +G +++ ++ Sbjct: 377 FNLAFQNLSQLEEKYGKNLTTAILGACGTQILFNPREQQTAELISKIVGTQKYRESQRSR 436 Query: 510 SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 S V ST ++ + L+ ++ + + G Sbjct: 437 SVSGGKV--SNSTSSQVKERPLIPPHQVRMMGQGWAIILNAG------------------ 476 Query: 570 PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPA 629 F RD + E + E + L + V PQ+PV PA Sbjct: 477 --FRARDGSSEYIPYRCKIRVFEEYKQ-----LTRWSASQWTHARKVFIQRSPQRPVDPA 529 Query: 630 INDKKSDSGVNVPAGGIEQELKMKPEEEMEQQL 662 V + +L+ + +E Sbjct: 530 YLKAGVKLAEAVLSLPSTADLERQIADEALSGY 562 >UniRef50_Q07GD2 VirD4 protein, putative n=6 Tax=Bacteria RepID=Q07GD2_ROSDO Length = 469 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 81/455 (17%), Positives = 152/455 (33%), Gaps = 53/455 (11%) Query: 161 RMLKKDGKDSDIRIGDLP----IIRDSEIQNFCLHGTVGAGKS--EVIRRLANYARQRGD 214 + LKK + + IG P ++ + AGK VI L R Sbjct: 25 KELKKLQRQDGLLIGRNPHTGRLLHYDGPAHLITLAPTRAGKGVGTVIPNLLAAERS--- 81 Query: 215 MVVIYDRSGEFV----KSYYDPSIDKILNPLDAR---CAAWDLWKECLTQP-----DFDN 262 V++ D GE ++ +L+P + AA++ D + Sbjct: 82 -VLVIDPKGENARIAGEARRRFGTVYVLDPFEVSGHPSAAYNPLDRLTPDSLDLGEDAAS 140 Query: 263 TANTLI--PMGTKEDPFWQGSGRTIFAEAAY--LMRNDPNRSYSKLVDTLLSIKIEKLRT 318 L+ P G + W + I + D +R V L++ EKLR Sbjct: 141 LTEALVMDPPGQVTEAHWNEEAKAILGGLIMFCVCHEDRDRRSLATVREYLTLPPEKLRA 200 Query: 319 YLR----NSPAANLVEEKIEKTAISI----RAVLTNYVKAIRYLQGIEHNGEPFTIRDWM 370 L + A L+ + +VL+N + +L D+ Sbjct: 201 LLELMQDSDEAGGLIARAANRFLGKADREAASVLSNAQRHTHFL-DSPRIARCLARSDFA 259 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR-----------R 419 + +F+ + + + + +S A++ + E Sbjct: 260 FSDLRHRITS-VFLVLPPNRMDAYSRWLRLLVSQALQDVARDAERPQGASDGHSQRLKTP 318 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 F DE L +L + + +G +Q +QL+D+YG A + + Sbjct: 319 ALFMLDEFAALGRLEAVERAMGLMAGYGLQLWPILQDMSQLKDLYG-DRANTFIANAGVQ 377 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 F + A++ + IG++ ++ + G DG S ++ + L++ +I Sbjct: 378 QVFGVNDFETAKWLSQMIGQETAGFQTDSFKPG-----DGPSFSNNLTGRDLLTPDEIMQ 432 Query: 540 LPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 LP + + G AV L+Y P+ A F P Sbjct: 433 LPPDRQLLRVQGQATAVAQKLRYFADPEFAGLFTP 467 >UniRef50_UPI00016C4AF4 Agrobacterium virulence virD4-like protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4AF4 Length = 595 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 74/420 (17%), Positives = 139/420 (33%), Gaps = 48/420 (11%) Query: 187 NFCLHGTVGAGK--SEVIRRLANYARQRGDMVVIYDRSGEFV----KSYYDPSIDKI-LN 239 + G GK S ++ L R D VVIYD GE +S+ D + L+ Sbjct: 132 HLAAFAPTGVGKGTSLILPFLLGLIR---DSVVIYDPKGEACNLTAQSFRDRGYQVVVLD 188 Query: 240 PL---DARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKE-DPFWQGSGRTIFAEAA 290 P ++ A ++ E DP W S A Sbjct: 189 PYQVATKTPDGFNPLAMIDKDSPLVIDHARAMAAEMVVRTGNEPDPHWNDSAEAFIAAMI 248 Query: 291 YLMRNDPNRSYSKL--VDTLLSIK---IEKLRTYLRNSPAANLVEE-------KIEKTAI 338 L + + L V +LL+ ++ + ++ + ++ +K Sbjct: 249 ALTCLYGDGANRSLQAVRSLLTDPERMQAAIKVMVGDTAMSGMIARMGHQLATLKDKELA 308 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 S+ + +++ + E + +K +F+ D + + Sbjct: 309 SVLSTTNRHMRWLDTPAIANSTREST-----FDPLDLTKKPLAVFVVLPVDQMKAQAGYL 363 Query: 399 SMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 + + +R +A G +V F DE +L ++ L + L R +G QS Sbjct: 364 RLVMGSLLRACVAGGLQEQHKVHFVLDEAASLGEMDALEQALNIGRGYGIRIQLYYQSTG 423 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD---- 514 QL+ +G + T+ FF AE+ + +GE+ S + G Sbjct: 424 QLKKCWGVDGGDQVVLSNTTQIFFGVRDKDTAEYVSAMLGEETIWVESSGSNSGDSTSVN 483 Query: 515 --------PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 V G +TG + + L+ ++ +L + T PG P ++Y P Sbjct: 484 RNDPGGSFSVSRGRNTGLQQQARKLLKPEEVVALDERTAITLTPGVKPIATTLVRYYEEP 543 >UniRef50_C9LC04 ATPase n=12 Tax=Bacteria RepID=C9LC04_RUMHA Length = 668 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 86/580 (14%), Positives = 183/580 (31%), Gaps = 56/580 (9%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVT-------GGRQLTDNPKDV 159 + ++ L+TF ++ R G+ + G P ++ Sbjct: 65 DFPYNLYGIFLCLVLFGLLTFLLMRMGYDRNGEISDHDRNLNYSTKGTYGTSGFMTPDEM 124 Query: 160 ARML------KKDGKDSDIRIGD----LPIIRDSEIQNFCLHGTVGAGKSEVI-RRLANY 208 ++L KK+ ++ LP + +N ++G G+ KS R + Sbjct: 125 MKVLELTGDVKKNKGTILGKLNGKAVCLPY-KTRMNKNIAVYGASGSMKSRAFARNMIFQ 183 Query: 209 ARQRG--------DMVVIYDRSGEFVKSY--YDPSIDKILNPLD----ARCAAWDLWKEC 254 RG + ++I D E +S Y + ++ + +W+ E Sbjct: 184 CVARGQEGNNASGESLIITDPKSELYESMSAYLENEGYVVKAFNLVNPENSDSWNCLGEI 243 Query: 255 LTQPDFDN-TANTLIPM--GTKEDPFWQGSGRTIFAEAAYLMRN---DPNRSYSKLVDTL 308 Q A+ +I K D FW + + + R+ ++ L Sbjct: 244 NGQETMAQVFADVIIQNTGSGKGDHFWDNAEMNLLKALVLYVDQGFPPEARNIGQVYKLL 303 Query: 309 LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG---EPFT 365 ++L + P ++ + + V + + + + N + + Sbjct: 304 TMSSEKELNSLFDLLPVSHPAKVPYCIYKQASDTVRSGVIIGLGARLQVFQNKLIRQITS 363 Query: 366 IRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR------R 419 + + QK + I+S+ D ++ + S++++ L+ + Sbjct: 364 YDEIDLTLPGKQKCAYFCITSDQD--STFDFLSSLFMTFIFIKLVRYADKYGEEGKLPVA 421 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 V DEL + +L + + R Q+ Q+++ Y + +T+ Sbjct: 422 VHILADELANTGAILELNKKISVIRSRNLSISCIFQNLPQMQNRYPYNQWQEIIGNCDTQ 481 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME---RQTLVSYSD 536 F A F + G+ +SE + V D + + ++ L++ + Sbjct: 482 LFLGCTDEVTATFISNRSGDVTVGVSSEAKQLNSWRVSDYTPEYRQTKSIGKRKLLTPDE 541 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 I LP T V L G Y P A + PR + E + E + Sbjct: 542 ILRLPLDTALVILRGQKVLKVEKYDYTLHPD-AKKLTPRKAS-EHIPEWRKNGSLEETDY 599 Query: 597 RQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD 636 R S S + + ++P P + D Sbjct: 600 RPQPSFGSAKRKRRSSSASIAK-QKPHFTSEPVYQEPTPD 638 >UniRef50_A7GI48 TraG/TraD family protein n=4 Tax=Clostridium botulinum RepID=A7GI48_CLOBL Length = 541 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 81/474 (17%), Positives = 167/474 (35%), Gaps = 44/474 (9%) Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEV--IRRLANYARQRGDMVVIYDRSGEFVKS--YYD 231 ++ + + + G GK+ I L N +V YD GE + ++ Sbjct: 59 NIKLEEKIAFEGTVIIAPTGGGKTTSFFIPNLLN--PNLKGSIVAYDPKGELYEKTSWFQ 116 Query: 232 P---SIDKI-LNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGT----------KEDP 276 D + PL+ ++L ++C + A+TLI G+ Sbjct: 117 KNICGRDIVVFAPLEPSISCKYNLLEQCKDTTEVLQLASTLITNGSLAIELQTGKKTGGT 176 Query: 277 FWQGSGRTIFAEAAYLM--RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAA-----NLV 329 W +F+ A + P + ++ +++L T NS ++ Sbjct: 177 EWDNMATPLFSAALLYCKAQGLPVSTIENAFRLIIEKSLQELDTLFSNSTEDCRTQWDIF 236 Query: 330 E--EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 ++T SI+ LT +K G + + + +K+ ++I S Sbjct: 237 NSVGDADRTIGSIKITLTTALKIF----GDKKICKVLSGTSTFNPAHLRKKSTCIYIISE 292 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + + PV++ + S +L + V+FF DE L L ++ R Sbjct: 293 ERRSSYVSPVMASFFSQLFDKVLDSYNKNSLPVYFFLDEFANLGMLNNMSVNCATVRSRE 352 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF-RSPSHKIAEFAAGEIGEKEHLKAS 506 +QS +QLE IYG+ A S+ + + T+ F K ++ + G + + Sbjct: 353 ISLNICLQSISQLEQIYGKDNALSILNNLKTKIAFSGLSDLKTLDYISQLCGNTQIQVCN 412 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 + +D + + L + DI+ L + + + P + Y T+ Sbjct: 413 TSIT------KDNTTKSYSYTTKKLFNKEDIRCLNEDDMLIVMHNKQPILDKKNIYYTQE 466 Query: 567 KVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE 620 K + P N + + +++ + +LF+ ++ V + Q E Sbjct: 467 KYNSKI---KETPLKINLPTNNIIKNKSDEEKYINLFKENIKLKVEHKIKEQEE 517 >UniRef50_A7VXU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXU9_9CLOT Length = 661 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 83/491 (16%), Positives = 162/491 (32%), Gaps = 50/491 (10%) Query: 186 QNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVIYDRSGEFVKSY--YDPSIDKIL---N 239 +N ++G G GKS A +RG+ +VI D EF + Y Y + + N Sbjct: 164 KNIMVYGAPGTGKSRGFVMPFIMQAVKRGESMVICDSKAEFYEMYSEYLRNEGYFVRSYN 223 Query: 240 PLDAR-CAAWDLWKECLTQPDF-DNTANTLIPMGTKE---DPFWQGSGRTIFAEAAYLMR 294 LD + W+ + + + A +I + + + FW + + + + ++ Sbjct: 224 LLDLQASDGWNCLMDSADDVNLVQHIAEVIIRNTSADSEREDFWSKAEKNLLMALIHYVQ 283 Query: 295 NDP-----------NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAV 343 + RS + L S + ++ R P + + + Sbjct: 284 SLTYPNSDKLLPPEERSLGTIYRLLASTSVAEMDARFRALPPGHPALPPYGIFRQAPHNI 343 Query: 344 LTNYVKAIRYLQGIEHNGEPFTIRDW---MRGVREDQKNGWLFISSNADTHASLKPVISM 400 N + + + N +I + +K + I S+ D + + + SM Sbjct: 344 WGNIMIGLGSRLNVFQNKLADSITKYNEIDLEEPGKRKCAYFCIISDQDD--TYRFLSSM 401 Query: 401 WLSIAIRGLLAMGENRNRR-----VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 + S+ L R V DE + LP+ + L +R Q Sbjct: 402 FFSLLFIKLFDFARKSENRRLPVRVNVLMDEFCNI-DLPNSKKYLSVSRSRNIDIQCVAQ 460 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ------Y 509 S +QL D Y L + + F A+F + + G S + Sbjct: 461 SVSQLADRYPRTEWQELVGDCDYQLFLGCNDTMTADFISSQCGNITVRVNSASIPMTPMF 520 Query: 510 SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK-- 567 S ++ R S GK+ + L+ +I+ LP + + G P + + + P Sbjct: 521 SLSSNHAR--YSQGKNSAGRPLMMPDEIRRLPKDKAILLVRGAKPLMLYKIVPEEHPDFK 578 Query: 568 -----VAPEFIP--RDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE 620 A +++P R E +N +S ++ Q+ + Sbjct: 579 KLRFCKAVDYVPDWRKRECERQNVISKEDTDKKENTFQIRIKEADIESAEYVPNEEELEL 638 Query: 621 QPQQPVSPAIN 631 P +S I+ Sbjct: 639 HPSINLSKGID 649 >UniRef50_Q209N2 Conjugal transfer protein VirD4 n=2 Tax=Aeromonas RepID=Q209N2_AERHY Length = 641 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 81/516 (15%), Positives = 165/516 (31%), Gaps = 63/516 (12%) Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG---EFVKSYYDPSID--KILN 239 Q+ + +GK I + D VV+ D + + +LN Sbjct: 137 AQHVLMAAPTRSGKGVSI--VIPNLLSWKDSVVVLDIKQENWDITSGFRAKHGQECYLLN 194 Query: 240 --PLDARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYL 292 P D R W+ P D L P E P WQ S R+++ Sbjct: 195 LAPRDYRSHRWNPLFYISDDPNFRINDIQKIGQMLFPKVENEAPIWQSSARSLWLGLVLY 254 Query: 293 MRNDPN--RSYSKLVDTLLSIKIEKLRTYLR-NSPAANLVEEK-----------IEKTAI 338 + + + + L E+L + + N + ++ +KT Sbjct: 255 LIETEELPVTMGEALRQLTMGD-ERLAEIVEQRQESDNPLSDECYLALKEYLDTPDKTRG 313 Query: 339 SIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPV 397 S+R T ++ + +G F +RD ++ +++ D L P+ Sbjct: 314 SVRKGFTASLELFYNPVIDAATSGNDFDLRDL------RKRRMSVYVGITPDDLDRLAPL 367 Query: 398 ISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 I+++ I R L + DE + K+ L + + +G + Sbjct: 368 INLFFQQVIDLNTRELPEQNPDLKHSCLLLMDEFTAMGKVGILSKGISYIAGYGLRMLPI 427 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 IQS AQL + YG AA + D + F + K+A+ + +G K S Sbjct: 428 IQSPAQLRETYGADAAETFIDNHALQIVFAPKNIKVAKEISDSLGTKTVKNKSRSRQLTG 487 Query: 514 DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY----------- 562 R S + L+ +++ + + L P + + Sbjct: 488 KTSR---SENASDTGRALLMPQEVKQIGQKAEILLLENCPPIKCSKITWYADQTFNERGN 544 Query: 563 ----QTRPKVAPEFI-----PRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSG 613 P A + P+ N++ + + + ++ + + + ++ Sbjct: 545 GRDGVKFPSPAVPLVDPNNRPKGEVSFHSNKIEDAETSEKTVVERDITVADIENIDNLNL 604 Query: 614 EDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQE 649 +D + + +I+D D V+ G+ + Sbjct: 605 DDFSCDFSKIEIPEGSISDDAMDDLVSQFFNGLAEA 640 >UniRef50_A3EW05 Putative plasmid transfer factor (TraG) n=1 Tax=Leptospirillum rubarum RepID=A3EW05_9BACT Length = 657 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 85/596 (14%), Positives = 195/596 (32%), Gaps = 82/596 (13%) Query: 112 FVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR--MLKKDGKD 169 + ++ + ++ + +++ R + ++ + G P+++ + +L + G Sbjct: 72 LLAGTIIFMTGGVVATGGLWYVVNRSNMAERKSTLHGSAHWA-RPEEIRKTGLLSESG-- 128 Query: 170 SDIRIGDL------PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 + +G + +R ++ +GK + + V+++D G Sbjct: 129 --VYVGAITDGSRTRYLRHDGPEHLLAFAPTRSGKGVGL--VIPTLLTWPHSVLVHDIKG 184 Query: 224 E---FVKSYYDPSIDKI---LNPLDAR--CAAWDLWKECLT-----QPDFDNTANTLI-P 269 E + + + +P DA ++ E D N A ++ P Sbjct: 185 ENWALTAGWRQKELGSLCLKFDPTDASGGSCRFNPLSEIRIGTDREIQDVQNIATMIVDP 244 Query: 270 MGTKEDPFWQGSGRTIFAEAA-YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLR------- 321 G + W +G + A +++ + +++ + + + +L Sbjct: 245 DGKGLNDHWAKTGFALLVGAILHVLYAEKDKTLRGVARFISNPSAASDTEFLETMKSTRH 304 Query: 322 --------------NSPAANLVEEKIEKTA-------ISIRAVLTNYVKAIRYLQGIE-H 359 + +V E ++ + + +++ R + Sbjct: 305 DHEYSRGWFDRNGGPTATHPVVAESAQEMLNKADNERSGVISTAMSFLSLYRDPVVAKNT 364 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL---LAMGENR 416 F + D M K L+I LKP++ + ++ +R L +A + R Sbjct: 365 EVSDFMLTDLMNA----DKPVSLYIVVPPSDKDRLKPLVRLVINQTVRRLTETMAFSDGR 420 Query: 417 -----NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 R+ DE P L KL E L +G Q +QL Y A Sbjct: 421 SVAGYKHRLLLMIDEFPALGKLDIFSEALAFIAGYGLKAYLITQDLSQLYAAYTRDEA-- 478 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA-DPVRDGVSTGKDMERQT 530 + + R F + A+ + G+ +A+ +S G + + G+ + Sbjct: 479 ILSNCHIRIAFAPNKPETAKLLSEMCGKTTVFRATTSFSGGRFSWILKSKTIGEQEFGRD 538 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK--VAPEFIPRDINPEME------ 582 L++ + SLP V + G P ++Y P+ P D + + Sbjct: 539 LLTLDEAMSLPAEESLVFVAGQSPIRGRKIRYYEDPEFSRRARISPPDRSDRLREVLPPG 598 Query: 583 NRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSG 638 +RL V G A P+ + + + ++P+ P +D ++ Sbjct: 599 SRLPGVAPESRLSGDPGADPIRPEQSGLPLPPEDGENDEPENRKFPDSSDSGTNVE 654 >UniRef50_C9R835 TRAG family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R835_AMMDK Length = 663 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 99/562 (17%), Positives = 183/562 (32%), Gaps = 69/562 (12%) Query: 122 ICLITFFVVSWILGRQGKQQSENE-VTGGRQLTDNPK-------------DVARMLKKDG 167 L+ S +LGR + +E G ++ D+P DV Sbjct: 113 AGLVVGMPASLLLGRLRRTTRHDERHVHGLRVADSPAKGTGRWGSDRDVADVCEFGPPGP 172 Query: 168 KDSDIRIGDLP------IIRDSEI----QNFCLHGTVGAGKSE--VIRRLANYARQRGDM 215 + +G L + + + G GK+ V+ + A G+ Sbjct: 173 GHGGVVLGKLKGRIVRAVPEKAPTVKRPAHALAVAGSGGGKTFCFVVPNVIAGACD-GES 231 Query: 216 VVIYDRSGEFVKS-----YYDPSIDK-ILNPLDAR-CAAWDLWKECLTQPDFDNTANTLI 268 +++ D GE + N D R + W+ EC T + A L+ Sbjct: 232 LIVTDPKGELTPLLAPWLRKRMGYKVFVFNLADPRHSSFWNPLLECRTPVETYQAAQVLV 291 Query: 269 ---PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKL--VDTLLSIKIEKLRTYLRNS 323 K PF+ L+R D + L V +LLS +L+ ++ Sbjct: 292 LNAQERGKGSPFFTALEIQALTALMSLLRADFPEDQAHLRSVLSLLSWPKNRLKERFDSA 351 Query: 324 PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE--PFTIRDWMRGVREDQKNGW 381 A ++ + + + N V + + + + R + ++ Sbjct: 352 YRAGKLDVEGHEAFRGAYSHWENAVAGLTSKLALFRDPDLARLLSRQELDLEAFGKEKAA 411 Query: 382 LF--ISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLP 434 LF + +D L+P+++++ + L + + V DE + ++P Sbjct: 412 LFCVLPVGSDY---LRPILAVFYHFLLDRLYTLARSSPGQRLPVPVRLILDEFANIGRIP 468 Query: 435 DLVEILPEARKFGGCYVFGIQSYAQLEDIY-GEKAAASLFDVMNTRAFFRSPSHKIAEFA 493 EI+ AR G ++ +Q QL+D Y GE S+ + + E+ Sbjct: 469 KFQEIMATARGLGIKVLYVLQELQQLKDNYPGEDM--SILGNTFVKVYLGGSEKPTREYF 526 Query: 494 AGEIGEKEHLKASEQYS-YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 + E+GE +E+ + + + R+ L+ ++ LP+ C L G Sbjct: 527 SRELGEAAVYVETERQDVTHPWNRLEAPKRTRTVVRRALMEADELGRLPEKNCVALLQGH 586 Query: 553 YPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVS 612 YP + P+ L+ A E R L P PE Sbjct: 587 YPLYLEKCGWTELPQARE-----------IRELAGRTVADVVEARPDVQLQLPPYPE--- 632 Query: 613 GEDVTQAEQPQQPVSPAINDKK 634 GED Q+P + D Sbjct: 633 GEDEDGKPGNQEPRVRSGADDG 654 >UniRef50_A5CZ99 Type IV secretory pathway, VirD4 components n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZ99_PELTS Length = 655 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 150/449 (33%), Gaps = 36/449 (8%) Query: 142 SENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE- 200 E + GG + + + R+ + + P+ Q+ C+ GAGKS Sbjct: 157 KEGKFGGGTLVGRLDRRIVRLQPEKCRP--------PLP-----QHTCVVAGTGAGKSFS 203 Query: 201 -VIRRLANYARQRGDMVVIYDRSGEFVKS-----YYDPSIDKILN-PLDARCAAWDLWKE 253 I A + G+ +V+ D GE I N + W+ E Sbjct: 204 FAIPNAVAAAME-GESIVMTDPKGELACLLAPWLRERGYKVYIFNLAYPQWSSYWNPVME 262 Query: 254 CLTQPDFDNTANTLIPMGTKEDP-FWQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLS 310 C + A ++ K+ ++ + YL+R D +++ + +LLS Sbjct: 263 CRDDEEITAFATAIVLNAAKDSSGYFVMKEIQLLKALVYLLRADFPVEQAHLRSALSLLS 322 Query: 311 IKIEKLRTYLRNSPAA-NLVEEKIEKTAISIRAVLTNYVKAIRYLQG---IEHNGEPFTI 366 +E L + L + E+ ++ + N + G E + Sbjct: 323 WPVEALDERFARAFQEGRLSQTGYEEWRGAVSSNYENACSGLTAKLGVVRAEPVARLLS- 381 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN----RRVWF 422 R + ++ LF + LKPV+S + R L + F Sbjct: 382 RQEIDLSAMGREKAVLFCVLPIASGH-LKPVLSTFYYFFFRRLYGLAAEHGGKLPNPTRF 440 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF 482 DE + ++P VE++ AR G F +Q QL+D YG + ++ + F Sbjct: 441 ILDEFANVGQIPGFVEVISTARSLGIKIQFILQGLKQLQDQYGGPESEAILSNCPVQLFL 500 Query: 483 RSPSHKIAEFAAGEIGEKEHLKASEQY-SYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 + + +GE +E+ + + + + R+ L+ ++ + Sbjct: 501 GGDDATTTRYFSQRLGEAAVYAETERRETTMPWNRLEIPKKSESVTRRALMEPEELSGMD 560 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 + + PA + + P+ Sbjct: 561 PMAAVALVRWTLPAYLQKVGWTELPQANE 589 >UniRef50_C2BRH0 TraG/TraD family protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRH0_9ACTO Length = 613 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 100/613 (16%), Positives = 197/613 (32%), Gaps = 73/613 (11%) Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQ 140 I + +T + D + L + A + A + ++ F+V W GK Sbjct: 17 IAFQVRTTWNKGLAFVQDHVLDDFHSPLHVSMYTADLGAGLGAIVLMFLV-WAYHNVGKM 75 Query: 141 QSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE----IQNFCLHGTVGA 196 G P D+ KD ++ + G + DS N + G+ G+ Sbjct: 76 SQRVGEEHGSAQWAKPSDMKPFTDKDKRNQLLFTGSEALSLDSRKTQRNLNALVIGSSGS 135 Query: 197 GKSEVIRRLANYARQRGDMVVIYDRSGEFVK----SYYDPSIDK-ILNPLD-ARCAAWDL 250 GKS + N A+ I D GE ++ S + + N +D A+ ++ Sbjct: 136 GKSRYFV-MPNLAQANTSFA-ITDPKGELLRLTGQSLKNAGYRIRVFNLVDFAQSDQFNP 193 Query: 251 ---WKECLTQPDFDNTANTLIPMGTKEDP-----FWQGSGRTIFAEAAYLMR--NDPNRS 300 + + D I + P FW+ + R + + S Sbjct: 194 LAYFNPHQAEVDCTVLTENFITNTNGQKPTSGDGFWEKAERALLNALISYVYFTQGGEGS 253 Query: 301 YSKLVDTLLSIKIEK--------LRTYLR--NSPAANLVEEKIEKTAISIRAVLTNYVKA 350 +VD L ++ + + N A + + + ++ + A Sbjct: 254 LVDVVDLLARMQASEEDENAESDIDLIFEAVNEKIAEYDADPADWGSEAVSGIDGLRFAA 313 Query: 351 IRY---LQGIEHNGEPFTIR-------------------DWMRGVREDQKNGWLFISSNA 388 +Y LQG + I D + + + LF+ Sbjct: 314 AQYNTYLQGAGETKKSVIISLGVRMAPLHMAQMRKLLAADTIGLDKIGTEKTALFLVI-P 372 Query: 389 DTHASLKPVISMWLSIAIRGLLAMGE-NRNRRVWF----FCDELPTLHKLPDLVEILPEA 443 DTHA+ + S++ L + + N R+ F F DE + K+P + Sbjct: 373 DTHAAFNFIASIFYEQLFETNLYLADHNETGRLKFQVQCFMDEFANIGKMPSFERKIAVM 432 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 R G +Q+Y+Q + +Y + ++ ++ F E+ + +G++ + Sbjct: 433 RSRGISTAIIMQNYSQGKAMY-KDDWETIVGNCDSLLFLGGNEKSTTEYISKVLGKQTIM 491 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 S G S + + L++ ++ LP C L G P ++ Sbjct: 492 SEETSQSKGRTG---SFSQSQRKLGRELLTADELGRLPGGECIYILRGVRP-------FR 541 Query: 564 TRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQ 623 ++ AP F + S + A A + E D E + + Sbjct: 542 SKKLPAPSFTE-NYTYTPTMPASLAMPATPASLAEEDGDIEVDWEPGEPEESLLTDQSTC 600 Query: 624 QPVSPAINDKKSD 636 +P +++ D Sbjct: 601 EPARSDDKEQEHD 613 >UniRef50_B3ENB4 TRAG family protein n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ENB4_CHLPB Length = 756 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 104/603 (17%), Positives = 198/603 (32%), Gaps = 90/603 (14%) Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE---FVKSYY 230 ++R + ++ +GK VI L + V+YD E + Sbjct: 164 GKEVLRHNGPEHVFCFAPTRSGKGVGLVIPTLLTWTGS----CVVYDIKKENWAATSGWR 219 Query: 231 DP-SIDKILNPLDARCAAWDLWKECL----TQPDFDNTANTLI-PMGTKED-PFWQGSGR 283 S P ++ E D N A+ L+ P G+ E W + Sbjct: 220 RKFSHCLRFEPTTPGSVRFNPLLEIRKGLYEVRDAQNIADILVDPEGSLERRDHWDKTAH 279 Query: 284 TIFAEAA-YLMRNDPNRSYSKLVDTLLSIKI---EKLRTYLR--------NSPAANLVEE 331 TIF A +++ + ++S + LV L E L L + A+ E Sbjct: 280 TIFVGAILHILYAEKDKSIAGLVGFLSDPDRSIEETLHYMLNTQHLTNAPHPVVASCARE 339 Query: 332 KIEKT---AISIRAVLTNYVKAIRYLQGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSN 387 + K+ + + ++ R E+ F I D M ++ L+I Sbjct: 340 ALNKSPNELSGVISTAMTFLALFRDPIIAENTAVSDFHIEDLM----NSRRPVSLYIVVP 395 Query: 388 ADTHASLKPVISMWLSIAIRGLL--------------------------------AMGEN 415 KP+I + L+ R L A E Sbjct: 396 PSDIDRTKPLIRLILNQMGRRLTEKMTFRQMKSGKDASALNVLLKNMQRPNDKLTAQKEQ 455 Query: 416 RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 R+ DE P+L +L L +G + QS Q+E YG+ S+ D Sbjct: 456 PKHRMLLMLDEFPSLGRLSFFETELAYLAGYGIKCIMISQSLNQIEKAYGQN--NSILDN 513 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA-DPVRDGVSTGKDMERQTLVSY 534 + R + + + A+ + +G+ + ++ P V + + L++ Sbjct: 514 SHVRITYGALDERTAKRISDLLGQATEKRRQMNFAGSRLAPWLGHVMETEQESPRPLLTP 573 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLS--LKYQTRPKVAPEFIPRDINPEMENRLSAVLAAR 592 +I LP + + G P + + YQ ++P P+ + A L Sbjct: 574 GEILQLPGDDALLMV-GGIPPYRAKKVMYYQDDRFKERAWLP---APDTDEEQVAELFKS 629 Query: 593 EA--------EGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAG 644 + + R +AS+ +V + +TQ + + + + Sbjct: 630 QTLRNDWCIDDDRDVASMQNQPNKDVRDDDGITQPDHSGSAIGGKECETGQEDQKWEKDL 689 Query: 645 GIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVH 704 + + + EE++ SE + A EA +N +Q++M+R +E N ++ Sbjct: 690 E-KDAILLALEEKVLSD----ESEQKALFASANEEAELSQNQKVLQEKMRRAQERNRSIE 744 Query: 705 RER 707 R Sbjct: 745 LSR 747 >UniRef50_D2UFC9 Putative type iv secretory pathway, conjugal transfer protein n=4 Tax=Xanthomonas albilineans RepID=D2UFC9_XANAL Length = 564 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 96/525 (18%), Positives = 166/525 (31%), Gaps = 76/525 (14%) Query: 94 QVLHD-KYMIWCSEQLWS----AFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG 148 Q+L +Y + W LA + + ++ + ++ + + R E+ G Sbjct: 40 QLLTYWRYWQVVDQPAWHPYAPKIKLAGICGFGLPVMLYLIMVYAMLRT----KAQELYG 95 Query: 149 GRQLTDNPKDVARMLKKDGKDSDI--RIGDLPIIRDSEIQNFCLHGTVGAGK--SEVIRR 204 + + KD I R G I S ++ L + GK S VI Sbjct: 96 NARWARRDDLSRHDVLKDDPRGLIACRFGRRFIRIQS--KHLLLAASTRGGKGVSVVIPN 153 Query: 205 LANYARQRGDMVVIYDRSGEFVKS----YYDPSIDKILNPL--DARCAAWDLWKECLTQP 258 L + + VI D E + + +P D W+ P Sbjct: 154 LLAWL----ESAVILDVKREAWEKTAGQRAKYGQVYMFDPFSDDGSTDRWNPLGYVRLDP 209 Query: 259 -----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND----------------- 296 D A+TL E+PFW GR F A + +D Sbjct: 210 NHRNGDIVAIASTLYKEMRGENPFWPAMGRKTFVAACECLFDDYASKKGTAFETGLPTLG 269 Query: 297 ------------PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 P +S + LL + NLV E +I L Sbjct: 270 GVYRLLAGAHLKPGQSMQHYLGELLRQPTLGTH---ARTGLNNLVGLAPETFTSAIETAL 326 Query: 345 TNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 + + F + + V+ +++ + K V++++ Sbjct: 327 APLNIFSNPIVDAATSDNDFDLSKLRKTVQS------IYVGVSPAKLIEAKGVLNLFFEQ 380 Query: 405 AIR----GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 AI+ L + F DE L ++ + + +G V IQS AQL Sbjct: 381 AIKLNGRELPEHNPELKYQCMFMLDEFTALGRVEIVPVAVGWVAGYGIRIVIVIQSIAQL 440 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 E +YG A L + R F + AE + +GE + SYG Sbjct: 441 ESVYGADTARGLITNLGVRIVFTPREQRDAEEYSKMLGETTVRRRQRTQSYGQGS---SH 497 Query: 521 STGKDMERQTLVSYSDIQSLPDLTCYVTLPG-PYPAVKLSLKYQT 564 S + ++R+ L++ +++ L V + G YP + + Y Sbjct: 498 SYTEVIDRRPLMNPDEVKGLSPDKAIVFIEGVGYPILANKIFYYK 542 >UniRef50_A4VV00 Type IV secretory pathway, VirD4 component n=20 Tax=Streptococcus RepID=A4VV00_STRSY Length = 605 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 95/603 (15%), Positives = 194/603 (32%), Gaps = 88/603 (14%) Query: 54 FVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWS-AF 112 + ++C L + D + + P E Y L + + LW AF Sbjct: 12 LLGLAFGYFCHRLTLLYDSLTNAPPMERFAY-----------LLGEGLNQVFNPLWLFAF 60 Query: 113 VLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDI 172 +++A ++ ++T +V + K E E G + K+ K+ + I Sbjct: 61 TQKSLLAFILGVLTMTLVYLYVSTGQKVYREGEEYGSARF-GTSKEKRNFYSKNPFNDTI 119 Query: 173 RIGDLPI-------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE- 224 D+ + +N + G GAGK+ R + Q ++ D Sbjct: 120 LARDVRLTLLEKKKPLFDRNKNLIVIGGSGAGKT--FRFVKPNLIQLNCSNIVVDPKDHL 177 Query: 225 -------FVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP----MGTK 273 F+++ Y + ++N + ++ ++ T+ D + G++ Sbjct: 178 AEKTGKLFLENGYQVKVLDLVNMTN--SDGFNPFRYVETENDLNRMLTVYFNNTRGSGSR 235 Query: 274 EDPFWQGSGRTIFAEAAYLMRNDPNRS---------------------YSKLVDTLLSIK 312 DPFW + T+ A + + N KL+ L Sbjct: 236 SDPFWDEASMTLVRAIASYLVDFYNPPGSSKQEQEARRKRGRYPAFSEIGKLIKLLSKGD 295 Query: 313 IEK---LRTYLR------NSPAANL-----VEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 + L + + +KT S+ AV T I+ Sbjct: 296 NQDKSVLEVLFEDYAKKYGHENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVID 355 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE---N 415 T RD M + +++ D + + + +++ S L + Sbjct: 356 -----LTQRDTMDLKTWGTQKTMVYLVI-PDNDTTFRFLSALFFSTVFSTLTRQADVDFK 409 Query: 416 RNRRVWF--FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAA-ASL 472 + + DE + ++PD E R V +Q+ AQL+ +Y EK A ++ Sbjct: 410 GQLPIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTI 469 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 ++ + + +F +G +G++ S S+G ST + L+ Sbjct: 470 LGNCDSLLYLGGNDEETFKFMSGLLGKQTIDVRSTSRSFGQTGSS---STSHQKIARDLM 526 Query: 533 SYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAR 592 + ++ ++ C V + G P + KY +++ E Sbjct: 527 TADEVGNMKRDECLVRIAG-VPVFRTK-KYFPLKHKNWKWLADKETDERWWHYHINPLTA 584 Query: 593 EAE 595 E E Sbjct: 585 EEE 587 >UniRef50_A8S5W9 Putative uncharacterized protein n=4 Tax=Clostridium RepID=A8S5W9_9CLOT Length = 695 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 84/564 (14%), Positives = 180/564 (31%), Gaps = 118/564 (20%) Query: 108 LWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE-------VTGGRQLTDNPKDVA 160 L A + V V+ + + V ++ K+ + + + R +TD KD Sbjct: 77 LKPAVWIYGAVVTVMVYMLYLVFHVGTVKRAKRLMKAKEDSIESSLENSRFMTDKEKDDN 136 Query: 161 RMLKKDGKDSDIRIGDLPII-----RDSEI-------QNFCLHGTVGAGKSEVIRRLANY 208 K+ + + + +P+ + E+ + + G G+GK+ Sbjct: 137 FSPKRFTRLKEEKKDGIPVYAVYNKKKKELNINIAKPMHGLVIGATGSGKTTSFINPMIQ 196 Query: 209 AR---QRGDMVVIYDRSGEFVKSY----------------YDPSIDKILNPL-------- 241 G ++ D GE + + DP NPL Sbjct: 197 ILGKSSAGSSMICTDPKGELFQLHSGMLAEQGYKVMVLDLRDPYSSFRWNPLGDIYDRYQ 256 Query: 242 --------------DARCAAWDLWKEC--------------------------------- 254 D R + +L E Sbjct: 257 LYLKAGQGIFQCDTDVRQSGLELVNEADQYKDVWYEYKGKAYAVRRELLTVIKVEKQKIY 316 Query: 255 -LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKL--------- 304 D ++ + + P+ +++DP W+ R+I M D ++ Sbjct: 317 DEIYEDLNDLISVICPIESQDDPVWEKGARSIIMAVCLAMLEDSEYPELEMTREKFCFYN 376 Query: 305 VDTLLSIKIEK---LRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 V+ +S ++ L+ Y P + + + L +Y+ + ++ Sbjct: 377 VNKAISNSEDEFRALKEYFMGRPKLSKSVGLSRQVLSAADTTLASYMSIAFDKLSMFNDE 436 Query: 362 EPFTIRD--WMRGVREDQKNGWLFISSNA--DTHASLKPVISMWLSIAIRGLLAMGENRN 417 ++ + + + LF+ DT +L V + + A+ + + E+ + Sbjct: 437 GLCSLTSETDIDPQQFAAEPTALFLKIPDEKDTRHALAAVFVLCIYKALIKVASAREDLS 496 Query: 418 --RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 R V+F DE + K+ +++ R + +QSYAQL+++YG+ + + Sbjct: 497 LPRNVYFILDEFGNMPKIDKFDKMITVGRSRKIWFNMVVQSYAQLDNVYGQTISNIIKSN 556 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 + F S + E + G K S + G ++ ++ + L+ S Sbjct: 557 CGLKMFIGSNDIETCEEFSKLCGNKTVSTQSVSSTLGDKT--GNINVSSQVQTRPLIYPS 614 Query: 536 DIQSLPD----LTCYVTLPGPYPA 555 ++Q L + + G YP Sbjct: 615 ELQKLNNKNSTGNAIIVTFGNYPL 638 >UniRef50_A1VQA5 TRAG family protein n=2 Tax=Burkholderiales RepID=A1VQA5_POLNA Length = 661 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 86/546 (15%), Positives = 165/546 (30%), Gaps = 105/546 (19%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR--MLKKDGKDSDIR 173 ++A F V+++ R K + E G +++ +L + Sbjct: 98 LMLASGAMTSIVFPVAYVFRRTRKLKDERNDLHGSAHWAVAEEIEAAGILPTPANVGGVM 157 Query: 174 IGDLPII------------------RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM 215 +G + I R S ++ + +GK I + + Sbjct: 158 LGAVDIPVKNSGFNPFSAKAKTVYLRHSGPEHILVFAPTRSGKGVGI--VVPTLLSWSES 215 Query: 216 VVIYDRSGE---FVKSYYD---PSIDKILNPLDARCAAWDLWKECLTQ----PDFDNTAN 265 V+++D GE + + +P + A ++ E D N + Sbjct: 216 VLVHDIKGENWALTSGFRERVLKQRCLRFSPSETDSARFNPLSEIRLDDNLVKDVQNVST 275 Query: 266 TLI-PMGTKEDPFWQGSG---------------------------RTIFA------EAAY 291 ++ P G W +G + I + E A Sbjct: 276 MIVDPDGKGLQDHWAKTGFDLMTGVIIFVLVSDELEDSQRNLSTVQAILSDGGPVRELAE 335 Query: 292 LMRNDPNRS----------YSKLVDTLLSIKIE----------KLRTYLRNSPAANLVEE 331 + D + + +++ + I E +L + S AA Sbjct: 336 RLAADKDTDADEKTKIAEGFRAVMEYIRDIGYERIGAGHCTDVELVAWKTASQAAQSFLN 395 Query: 332 KIEKTAISIRAVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 K A + + +++ R + + FTI M Q+ L++ Sbjct: 396 KASNEASGVLSTALSFLSLYRDPIVAANTSASDFTIESLM------QRRTSLYLVVPPSD 449 Query: 391 HASLKPVISMWLSIAIRGLLAMGE---------NRNRRVWFFCDELPTLHKLPDLVEILP 441 LKP++ + ++ +R L E ++ DE P L KL E L Sbjct: 450 KDRLKPLLRLVINQVVRRLTEKMEFDETGASRSRFPHKMLLLIDEFPALGKLEIFEEALA 509 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 +G + Q +QL Y S+ + R F + AE + G Sbjct: 510 FIAGYGLKALLITQDLSQLTKAYSRD--ESILSNCHIRIAFAPNKIETAELLSKMSGAST 567 Query: 502 HLKASEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL 560 +S V + VST + + ++ L++ + LP V + G P + Sbjct: 568 VAHTQRNFSGSRLSVVLNNVSTNEQLSQRPLLTPDETMRLPPADELVFVAGHAPIYCQKI 627 Query: 561 KYQTRP 566 Y T P Sbjct: 628 IYYTDP 633 >UniRef50_D1AV80 TRAG family protein n=2 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV80_STRM9 Length = 630 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 86/486 (17%), Positives = 163/486 (33%), Gaps = 79/486 (16%) Query: 168 KDSDIRIGDL--PIIRDSEIQNFCLHGTVGAGK--SEVIRRLANYARQRGDMVVIYDRSG 223 +DS + +G++ +IRD+ + L GK S +I L + D V + D G Sbjct: 150 EDSGVVLGEVDGRLIRDNGKTHILLSAPTRTGKGVSVIIPTLVDS---WKDSVFVLDIKG 206 Query: 224 E---FVKSYYDPSID---KILNPLDARCAAWDLWKECLTQP-----DFDNTANTLIPMGT 272 E + + +PL +++ KE D A ++ Sbjct: 207 ENYQMTAGWRQKEFNNTIFKFSPLSIDSCSFNPMKEVRYLTPDEIDDAKTIAQIIVIDEG 266 Query: 273 KEDPFWQGSGRTIFAEAA--YLMRNDPNRSYSKLVDTLLSIK------------------ 312 DPFW +G + L + + S +V + Sbjct: 267 SSDPFWGLAGSDLATTLILYELYKGKGEANLSNVVKFITDPTGPLELRLKKLINKPIFDP 326 Query: 313 ------IEKLRTYLRNSPAANLVEEKI---------------EKTAISIRAVLTNYVKAI 351 +EKL ++ I EKT SI A + + Sbjct: 327 DRDEEILEKLLEIYTAQDDQEQIKRGIHPFIDRGIADALGKGEKTLQSIVATAKSKLSIF 386 Query: 352 RYLQGIEHNGEPFTIRDW-MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 ++ +I D+ + + K L+I L P++ + + ++ L Sbjct: 387 ESPNVEKNT----SISDFRILDLMAADKPISLYIVVPPGQIQPLAPLLRILIIQCVQLLT 442 Query: 411 AMGE--------NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 + R+ DE P + K+ L + + +G + +QS QL Sbjct: 443 PEMDYSGNSNKIKFKHRLLMLLDEFPAIGKMEILEKAIGFVAGYGMKMMLVVQSLDQLNK 502 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 IY E T+ F+ + +K AE+ + IG++ + S G + VS Sbjct: 503 IYSEN--NMFMGNCQTQVFYTANDNKTAEYISKTIGQETVISKSVSSDGGGFFSKKNVSV 560 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS--LKYQTRPKVAPEFIPRDINPE 580 K + L+ +++ P L + L G P +K + L ++ + +P + P Sbjct: 561 SKS--GRDLIRPDEMRRFP-LDKILLLVGGKPPIKSNKVLFFKDKRFKDKVKLPINPTPA 617 Query: 581 MENRLS 586 M+ + Sbjct: 618 MQREIE 623 >UniRef50_P18594 Protein virD4 n=16 Tax=Rhizobiales RepID=VIRD4_AGRT5 Length = 668 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 96/631 (15%), Positives = 199/631 (31%), Gaps = 63/631 (9%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 YM + + + ++V+ L + G + G + + Sbjct: 56 YMGHATPVFYCGLAIVVSTSIVVLLSQLIISFRNHEHHGTARWA-----GFGEMRHAGYL 110 Query: 160 ARMLKKDGKDSDIRIGDL---PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV 216 R + G G + + E + + AGK + + V Sbjct: 111 QRYNRIKGPIFGKTCGPRWFGSYLTNGEQPHSLVVAPTRAGKGVGV--VIPTLLTFKGSV 168 Query: 217 VIYDRSGEF---VKSYYDPSIDKIL--NPLD--ARCAAWDLWKECLTQP------DFDNT 263 + D GE D + +PLD R ++ + P + Sbjct: 169 IALDVKGELFELTSRARKAGGDAVFKFSPLDPERRTHCYNPVLDIAALPPERQFTETRRL 228 Query: 264 ANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIK-----IEKLRT 318 A LI K + R +F + + D L Sbjct: 229 AANLITAKGKGAEGFIDGARDLFVAGILTCIERGTPTIGAVYDLFAQPGEKYKLFAHLAE 288 Query: 319 YLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI---------RYLQGIEHNGEPFTIRDW 369 RN A + + A + +LT+Y + L + F++ D Sbjct: 289 ESRNKEAQRIFDN----MAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYD- 343 Query: 370 MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR--VWFFCDEL 427 +R + +L +S + + P++ + + L ++ R V F DE Sbjct: 344 ---LRRKRTCVYLCVS--PNDLEVVAPLMRLLFQQVVSILQRSLPGKDERHEVLFLLDEF 398 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSH 487 L KL + + + G ++F IQS + L IY + + + F + Sbjct: 399 KHLGKLEAIETAITTIAGYKGRFMFIIQSLSALTGIYDDAGKQNFLSNTGVQVFMATADD 458 Query: 488 KIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 + + + IG ++ + SY + D + + L+ ++ L D V Sbjct: 459 ETPTYISKAIG--DYTFKARSTSYSQARMFD-HNIQISDQGAPLLRPEQVRLLDDNNEIV 515 Query: 548 TLPGPYPAVKLSLKYQTRPKVAPEFI-PRDINPEMENRLSAVLAAREAEGRQMASLFEPD 606 + G P ++Y + + F PE + + + R+ + + + Sbjct: 516 LIKGHPPLKLRKVRYYSDRMLRRLFECQIGALPEPASLMLSEGVHRDGQDLSQQAAVT-E 574 Query: 607 VPEVVSGEDVTQAEQPQQPVSPAINDKKSD--SGVNVPAGGIEQELKMKPEEEMEQQLPP 664 + + + + P + ++D++ +G++VP G IE + E+++ Sbjct: 575 AQGLGDIDSIPNNMEAATPQNSEMDDEQDSLPTGIDVPQGLIESD-------EVKEDAGG 627 Query: 665 GISESGEVVDMAAYEAWQQENHPDIQQQMQR 695 + + G +MA QQ+ I QR Sbjct: 628 VVPDFGVSAEMAPAMIAQQQLLEQIIALQQR 658 >UniRef50_C5F2H7 Conjugal transfer protein TraG n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F2H7_9HELI Length = 607 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 95/533 (17%), Positives = 168/533 (31%), Gaps = 94/533 (17%) Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD-- 176 + C I F +V R+ K E G ++V D KD + IG Sbjct: 82 GVAFCFIVFILVKLAFLRKAKAI---ENLHGSAHWATLEEVKESGVFD-KDKGVYIGGFE 137 Query: 177 ----LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV------ 226 L +R ++ L +GK + L G+ +I+D GE Sbjct: 138 HKKTLHYLRHDGPEHVMLFAPTRSGKGVSL--LLPTLLSWGESALIFDIKGELWALTAGW 195 Query: 227 KSYYDPSIDKILNP--LDARCAAWDLWKECLTQP-----DFDNTANTLI---------PM 270 + Y + L+P LD +++ +E + D N A LI P Sbjct: 196 RQKYAKNKVLKLDPTCLDDSAVKFNILEEIRLETMHEVKDTQNIAINLIFKGETPPTNPT 255 Query: 271 GTKEDPFWQGSGRTIFAEAAYLMR-------------------NDPNRSYSKLVDTLLSI 311 F +G + + Y + NDPN+S +L++ ++ Sbjct: 256 QGSTSYFKSEAGNFLVSIILYALHLKKYRGENTPNLTDIYKFINDPNQSIDELLEEMVEC 315 Query: 312 KIEKLRTYLRNSP--AANLVEEKIEKTAISIRAVLTNYVKAIRY----LQGIEHNGEPFT 365 I + +N+ ++ K + V+ +A+ + F Sbjct: 316 DISTMD---KNTQEIIQSISRSMKNKATQELSGVVGTASEALNLYIDPILAKNTAKSDFK 372 Query: 366 IRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG---------ENR 416 I+D M + L++ L+P ++ ++ R L + Sbjct: 373 IKDLM----NYESPISLYLIIPPGQKDRLRPFFNLLINQIFRTLTDDSLNFKNGENIKRY 428 Query: 417 NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 ++ DEL KL L E L +G + IQ QL IYGEK ++ Sbjct: 429 KHKMLVLADELTMFGKLGVLEENLAYMAGYGMKFYGSIQDIQQLYSIYGEK--ETIISNC 486 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKAS-EQYSYGADPVRDGVSTGKDMERQTLVSYS 535 + R F + A+ + G +K S + VS ++ L++ Sbjct: 487 HIRIAFAPNKIETAKLLSEMGGITTIIKKSLTSSGKRTAVMLGNVSETIQEVQRPLITAD 546 Query: 536 DIQSLP------------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD 576 + LP + + G P + Y P F+ R Sbjct: 547 ECMRLPSAKKDKDDKIIAPGDMLIFIAGQAPIYGKQILYFKDP----AFLARS 595 >UniRef50_C8WH79 TRAG family protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WH79_EGGLE Length = 610 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 96/571 (16%), Positives = 177/571 (30%), Gaps = 101/571 (17%) Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 +A V L+ I + V + L R G + E G K+ + + K ++I Sbjct: 55 MALAVGLMAACIPWAVWARSLVRAGTYRQGEEH--GSARWGTLKEGRAFMDRKDKANNIL 112 Query: 174 IG-DLPI---IRDSEIQN-----FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE 224 + D + + ++++ C+ G G+GK+ + Q ++ D G Sbjct: 113 LSRDFALALKPKRFDLKHDRNRNVCVLGGPGSGKTR--YYVKPNLMQANADFLVTDPKGT 170 Query: 225 FVKS----YYDPSIDKIL------------NPL----------------------DARCA 246 + D D NPL D R Sbjct: 171 LLGDVGWMLEDAGYDIRTFDTTDFSRSMHYNPLSYVKDQADILVFVECLIKNTTPDDRKG 230 Query: 247 AWDLWKECLTQPDFDNTANTLI-------------------PMGTKEDPFWQGSGRTIFA 287 + D + E + + L+ +ED + IF Sbjct: 231 S-DPFWENSERLLYTALVAYLVYHARPEERDLNSLMLLLSLAEAREEDESYMSPLDLIFE 289 Query: 288 EAAYLMR---------NDPNRSYSKLVDT----LLSIKIEKLRTYLRNSPAANLVEEKIE 334 E MR R + D + + + L N A + Sbjct: 290 ELETGMRFMERGRGREAREERPFDDGGDWGWVRIAEPRDPEEDFALSNYRA---FKVAAG 346 Query: 335 KTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASL 394 KT SI +K + + + + +S +D+ ++ Sbjct: 347 KTLKSIIISCNVRLKPLSVDAVSDLVAYD----EMALDSLGSGEGSHAIFASMSDSDSTF 402 Query: 395 KPVISMWLSIAI-----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 + ++ + A L G + R V F DE + +PD ++ AR Sbjct: 403 DFLFALLMWQATSVLYKTALARFGGSLKRPVHFLLDEFGNIGTVPDFERVIATARSRNVS 462 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 + +QS +QLE Y ++ A ++ D +T F S + E + +G++ +E Sbjct: 463 FSIILQSASQLERAYKKEGAKTILDCCDTVVFLGGKSTETNEMISKMVGKQTVKVLTESD 522 Query: 510 SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 S GA+ + ++ + L++ ++ LP V + G YP + + P Sbjct: 523 SRGANR---STTQNYNVIERDLMTPDEVGRLPRDESIVLISGTYPLKGAKYRIEEHPSY- 578 Query: 570 PEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 PE P E R RE G Sbjct: 579 PEVDPGHAGARHEERFDFK-EYRERRGGDAP 608 >UniRef50_A8ZPA8 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPA8_ACAM1 Length = 555 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 80/466 (17%), Positives = 153/466 (32%), Gaps = 67/466 (14%) Query: 187 NFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRS-------------------GEFV 226 + G +GKS + +G V+ D G Sbjct: 100 GILVEGGPDSGKSFTFFNQFMLSVVFQGWGCVMVDFKYPKQTARIADYAKRCGYEVGVLA 159 Query: 227 KSYYDPSIDKILNPLDA-RCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTI 285 ++ + LNP+D R + E + + N + + ++ D FW + Sbjct: 160 PTFPETGT---LNPVDLLRSPIDTIRAEEIIKVAKLNMVQSKV--QSEGDKFWDDASTQT 214 Query: 286 FAEAAYLMRNDPNRSYSKLVDTL--------LSIKIEKLRTYLRNSPAANLVEEKIEKTA 337 A L++ L L L +++ + + ++ + Sbjct: 215 LAAGLCLIKTWKYADILTLRAMLSLDDLPQRLKDNRDQIPPSIFAMFGQVIAAQRNARQF 274 Query: 338 ISIRAV---LTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASL 394 ++ + L + + A+ +L I + L I N L Sbjct: 275 TALLSTCLQLLDKMTALEFLPSIIGKTTV---------PLDVGPKQMLIIGLNRAYKEVL 325 Query: 395 KPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 P I M+ I L + + R + FFCDELP L LP + L E R+ G C + G Sbjct: 326 SPSIGMFAHAVIE--LNLTQPRETPLAFFCDELPAL-TLPKIKNWLSEGREDGFCGILGF 382 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD 514 QS QL + YG++ A ++ T+AF + +A A G+ E + G + Sbjct: 383 QSVHQLIERYGKEGAEIIYTGSPTKAFMNPNNINVAHQMAKWTGDIEVDYTLKSR--GRN 440 Query: 515 PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 + ++ + + ++I +P T + PG FIP Sbjct: 441 KGGSSSNVSDQVKVKLALEATEINRMPQGTALMVSPG-------------FETKTEAFIP 487 Query: 575 RDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE 620 + + ++ E ++ + P++ + TQ + Sbjct: 488 VKRRIRVPEKNQRIIQLSE---QRWKTHMRPELISASRSKPYTQED 530 >UniRef50_C5SH52 TRAG family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SH52_9CAUL Length = 677 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 97/644 (15%), Positives = 192/644 (29%), Gaps = 77/644 (11%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVS-WILGRQGKQQSENEVTGGRQLTDNPKD 158 + E + + A + LV +I F ++ + G+ G+ + G + + Sbjct: 54 RVADDIEPMKPGLIRALGLGLVPVVIVLFALAHALTGKYGQN-----IHGAARFATLTEM 108 Query: 159 VAR-MLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDM 215 R + + G L E + GK V+ L ++ Sbjct: 109 RRRGLFSRKGIIVGRCAATLLRYPGEEF--VMIAAPTRTGKGVGVVVPNLLDF----EGS 162 Query: 216 VVIYDRSGEFVKS----YYDPSIDK-ILNPLDA--RCAAWDLWKECLTQP-----DFDNT 263 +++ D E + + + +P A + W+ P D Sbjct: 163 ILVVDIKFEHFQLTSAVRKAMGQEVFLFHPFAAGAQTHRWNPLDTIRRDPEHRVNDILAI 222 Query: 264 ANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND-PNRSYSKLVDTLLSIKIEKLRTYLRN 322 A+ L P +D FW R +F L+ P R V + E +TYL Sbjct: 223 AHVLYPHAKDKDGFWNEQARNLFLGVVLLLMEQAPERVNMANVFAEAGGRGEAPKTYLAR 282 Query: 323 S--------------PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG-EPFTIR 367 A E T SI A + + F ++ Sbjct: 283 KSTELKPGPFTQICIDALARFCLTSENTLTSILATFNGPLTVFSDPKVASSTSTSDFNLQ 342 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR----RVWFF 423 D +K +++ ++++++S I+ + + Sbjct: 343 DL------RKKRMTIYLGIGPAELLPGALILNLFVSRLIQQNVDRQPADDPTLCVPCLLI 396 Query: 424 CDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR 483 DE L K+ L + +G + IQS +QL+ +YGE A +L F Sbjct: 397 LDEFAALGKVEVLAKASAYIASYGLRLLTVIQSQSQLDSLYGEHDARTLRTNHALHIHFA 456 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV---STGKDMERQTLVSYSDIQSL 540 A+ + +G + + + VR+G S +++++ L ++Q + Sbjct: 457 PRDPLDAKRLSERLGYFQVEETARSR-----MVRNGTVASSQWTNIQKRALRLPQELQLM 511 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 + L G P Y P F+ R + L ++ R +G+ Sbjct: 512 GPDEAILILDGIAPIKAQKAYYYKNPV----FLQRLRSA--SAYLQSLPRGRFTQGQLQR 565 Query: 601 SLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKM-----KPE 655 + ++ + P P + + P G + K Sbjct: 566 AACTDLFLKLPVSSTLPAEP-PLVPQAMEAQAQGEVVLSGAPKGPRQPAWKKWAKKTSNA 624 Query: 656 EEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEV 699 PP ++ + + Q+ RR++V Sbjct: 625 SGTNDAPPPASTDPAVSAERDKTPDPPPQR----QKARPRRKKV 664 >UniRef50_A6NYJ8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYJ8_9BACE Length = 680 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 89/629 (14%), Positives = 183/629 (29%), Gaps = 67/629 (10%) Query: 85 GKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSE- 143 G T + + W S S A++ + F + R G + Sbjct: 61 GMTGKATMGTIYFSPLACWRSAMTGSGLKCTFFTAVLAGGL--FAFVRLQNRFGSNDYDP 118 Query: 144 NEVTGGRQLT------DNPKDVARMLKKDG--KDSDIRIGD------LPIIRDS-EIQNF 188 T ++ T + K++ +L+ G + I +G + + D+ ++ Sbjct: 119 RNFTRSKRGTYGTSGWMSEKEMRSVLEVAGPERAKGIILGKTERGSVICLPEDTRLNKHI 178 Query: 189 CLHGTVGAGKSE-VIRRLANYARQRGDMVVIYDRSGEFV----KSYYDPSIDK----ILN 239 + G G KS VIR + +RG+ VV+ D E + + +L Sbjct: 179 AVFGASGTMKSRGVIRPALFQSIRRGESVVVADPKSEMFADTAELFKKHGYKVWVYNLLQ 238 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP----FWQGSGRTIFAEAAYL--- 292 P +W+ + +I TK D FW + Sbjct: 239 P--EYSDSWNCMFDLGGDTLMAQILTDVIISNTKGDEKGDHFWDNGESNLLKSLILYVDL 296 Query: 293 --MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN-------LVEEKIEKTAISIRAV 343 R R+ + + L ++L P + L + + I Sbjct: 297 DSTRTPEERNLAAVYQMLTQHTEKELTMLFDRLPIGHPAKGPYSLFSQASDTVRAGIVLG 356 Query: 344 LTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLS 403 L ++ ++ D K + I D ++SL+ + +++ + Sbjct: 357 LGTRLQVLQSEAVRRITRS----SDIDLSEPGWSKCAYYIIL--DDQNSSLEFLSALFFA 410 Query: 404 IAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 L+ ++ V DE+ + + D L R + QS Sbjct: 411 FLFIKLVRYADSTPEQRCKVPVNIILDEMNNIGTIKDFGRRLSTIRSRALQVIMCSQSLP 470 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS---EQYSYGADP 515 QL++ Y A L +T+ + AE+ + G+ S + S Sbjct: 471 QLQNRYPNNLWAELLGNADTQIMLGATDDVTAEYFSARSGDMTVEVNSTMTTRQSLALAQ 530 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP---KVAPEF 572 V + + R+ +++ ++ LP+ + L G + P + Sbjct: 531 VIPQYRYTEGIGRRRVLTPDEVLRLPNDELLIILRGQKVLRAKKFDFTEHPYAKECERTS 590 Query: 573 IPRDINPEMENRLSAV----LAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 I R + + A + + V + + P +P Sbjct: 591 IQRYQTDPAPAQPPEPPAQSMPAEPDMDKPPGPAPAAAAKQPVKAKPPQAKPKAPVPKTP 650 Query: 629 AINDKKSDSG-VNVPAGGIEQELKMKPEE 656 + + S+ E P + Sbjct: 651 SSGGQPSELPAKPAKRPKTLYESSRPPAD 679 >UniRef50_C6M7A4 Protein VirD4 n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M7A4_NEISI Length = 683 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 90/606 (14%), Positives = 189/606 (31%), Gaps = 99/606 (16%) Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQ----GKQQSENEVTGGRQLT 153 D+ L + +AA + +V ++ V ++ + SE E L Sbjct: 53 DRLPQGMVFPLKVSTAVAAAIPVVGLIMLLISVLRGKRKELHGSSRFASERE-IRKSGLL 111 Query: 154 DNPKDVARMLKKDGKDSDIRIG---------------------------DLPIIRDSEIQ 186 DNP A+ KK D+ +G I + Sbjct: 112 DNPS--AKKRKKGKDVPDLILGKYKGKYLRWSNDGFLYLAARTRSGKGIGFVIPNCLHYR 169 Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCA 246 + + + K E A + + G V ++ SG +P I Sbjct: 170 HSMVVNDI---KKENFLITAGFRAKHGQKVFFFNPSGTMPYHTEEPDAPLI-------SH 219 Query: 247 AWDLWKECLTQP-----DFDNTANTLIPMGTKEDP---FWQGSGRTIFAEAAYLMRNDPN 298 W+ P D + A P+ + FWQ + + +F + Sbjct: 220 RWNPLTYVRRDPVYTYKDALSVAAIFYPLKNDDKDGSNFWQEAAQKLFTGLLLYLIETEK 279 Query: 299 R----------SYSKLVDTLLSIKIEKLRTYLRN-------SPAANLVEE---------- 331 + + L + L+ ++ + S A+L Sbjct: 280 ERDLNLMQNMTTMTNLFRLTSPANGKTLKEWINDELELRAISSTASLSRNCVFLLRDFLQ 339 Query: 332 KIEKTAISIRAVLTNYVKAIRYLQ-GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 K +K A S+ + + + +G+ F R R + +++ + Sbjct: 340 KADKEAASVLSTMNAPLSIFLDPAVEAATSGDDF------RLDRLRMEPTTIYLGVAPNE 393 Query: 391 HASLKPVISMWLSIAI-----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARK 445 ++ ++ S +GL + + DE L +P + + + Sbjct: 394 LKIYSTLLKLFFSQLCDVNVQQGLPSDNPKLKYQCLLLLDEFTALGNIPAIEKGVGYLAG 453 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 +G + Q+ +Q+E++YG A + F R F AE + IG + Sbjct: 454 YGIRPILVFQTPSQVEEVYGSTARQTFFSNFAIRMIFAPREQNDAEELSKLIGFYTYKAK 513 Query: 506 SEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR 565 + + +++ +++ +++ +P+ C +++ G + Y Sbjct: 514 ---GTSRSRGKSSSSGVSISDQKRAVMNPDELKVMPNSDCIISMAGMSAIYAEKIIYDED 570 Query: 566 PKVA-PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQ 624 P + F+P PE L+ + A++ + P+ E + D AE+ + Sbjct: 571 PALKDRAFLPIPHVPE----LNVHIEAKKPVEVSKPAYVSPEEMESFNWRDAVNAEELAR 626 Query: 625 PVSPAI 630 V AI Sbjct: 627 SVLEAI 632 >UniRef50_B6JNL0 VirD4 coupling protein n=10 Tax=Helicobacter RepID=B6JNL0_HELP2 Length = 747 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 89/610 (14%), Positives = 192/610 (31%), Gaps = 113/610 (18%) Query: 189 CLHGTVGAGKS--EVIRRLANYARQRGDMVVIYDRSGE-------FVKSY-------YDP 232 + GAGK+ + L + +I D GE + + + ++P Sbjct: 149 MIVAPPGAGKTACVALPNLLT----LPNSCIITDIKGELRDKTAGYRQKFLNNRILIFNP 204 Query: 233 SIDKI---LNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEA 289 D NP D R + E L + + E+ W + +F Sbjct: 205 YGDDNTCYFNPFDKRIVEKMTFAEQLR--HVKAVGDGIF---VDEEDHWVSKAKELFVFF 259 Query: 290 AYL----------------------------------MRNDPNRSYSKLVDTLLSIKIEK 315 A L + ++ ++D + ++ Sbjct: 260 ALLQVVTKGHSSFYDVSIAPANDYAPLIHPKSPYYKQLYQHDKKTGEVILDPQTNAPMKN 319 Query: 316 -----LRTYLRNSPAANLVEEKIEK------------TAISIRAVLTNYVKAIRYLQGIE 358 L+ +L ++ EK T ++ ++ ++ E Sbjct: 320 PQANVLKLFLNQVADQKYIDMNDEKNYDPREPEPPYGTKGALDEIIRTDARSWANTPDDE 379 Query: 359 HNGEPFTIRDWMRGVREDQ-----------------KNGWLFISSNADTHASLKPVISMW 401 + + +M ++ + N ++I +L ++ + Sbjct: 380 FGSIMSSFKRFMYVYKDPKVREATSKMSFDYEELRTGNISIYIVIAQIDIGTLSSLVRAF 439 Query: 402 LSIAIRGLL-AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 L + L+ R++ DE KLP L+E+ R + +F Q YA + Sbjct: 440 LESIAKNLMVKESSKPEERIFIIADEFVRFGKLPFLLEMPALCRSYNVVPLFITQDYAMI 499 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 Y + L V++ F+ S + AE + E+G E + S+ YS + G Sbjct: 500 RKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVG--EFTRQSKNYSTEKSQLVFGG 557 Query: 521 STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK----YQTRPKVAPEFIPRD 576 S+ E + L++ DI ++ V + G A L LK ++ + + +P D Sbjct: 558 SSSYSHEGRNLLTAQDIMNINSDEVIVIVTGA-KATPLKLKANYWFKDKELLKRANLPID 616 Query: 577 INPEME---------NRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 + E + + +A+ + + + PQ+ + Sbjct: 617 LEVERQRVEEPIQPTTEIETTPNQNKADLGPSNKGEKVENESNERNTNENNPTTPQELEN 676 Query: 628 PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHP 687 + + + D + + ++ E+++ L +SE A ++ QQ + Sbjct: 677 SNLKESEKDDESTITLENANENIEQGNHNEIDEILKKPLSEISMEEKRALFKKMQQGDEE 736 Query: 688 DIQQQMQRRE 697 Q+ Q + Sbjct: 737 SEQEVTQSTQ 746 >UniRef50_D0UIQ5 Conjugal transfer protein TraG/VirD4 n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=D0UIQ5_AGGAD Length = 633 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 96/670 (14%), Positives = 212/670 (31%), Gaps = 122/670 (18%) Query: 24 QIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQY 83 Q I ++ + F I V + NG ++ ++ IQ+ Sbjct: 8 QKTAIKVFIPIVVFGIYALSVCVLIAMLSDLGNGNVF--------------TKLNNAIQF 53 Query: 84 YGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSE 143 + + + +LA ++ + + F + I +Q K+Q E Sbjct: 54 IQSRYSLTL-------PFKAIGQGFILEPILAFLMTTIFLVFVGFALH-IGAKQAKKQRE 105 Query: 144 NEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGT---------V 194 G+ ++ + +D K + + +D++ + F + G Sbjct: 106 ---IFGKAEWSGEAEIRKNGLRDTK-------GIIVGKDNKGK-FLIFGGQQFASVGAPT 154 Query: 195 GAGKSE--VIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPS---IDKILNPLDARCA 246 +GK VI L + + +++ D E Y + + +P Sbjct: 155 RSGKGVGIVIPNLLTW----ENSLIVLDVKQECFSITSKYREQGLGQKVFLFDPFSFNTH 210 Query: 247 AWDL-----WKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY 301 ++ + + AN+L P G F+ + +F YLM Sbjct: 211 RYNPLEYLDFNAPDIELQIQGLANSLYPAGKGGKDFFILQAQAVFVSCVYLMGKLNQIDL 270 Query: 302 SKLVDTLLS------------IKIEK---------LRTYLRNSPAANLVEE--------- 331 TL S EK L+ + + L+ + Sbjct: 271 LGSSFTLTSLAGALQGIKVQMWDSEKERFVVNTYPLQETVETAKRMGLLSDTIYAKFLSF 330 Query: 332 ----KIEKTAISIRAVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISS 386 + + ++A +K + L + + F RD ++ ++I Sbjct: 331 FDQMEAKDQFTGVKASFETPLKVFQDPLFEMATSTNDFDFRDL------RKEKITIYIGI 384 Query: 387 NADTHASLKPVISMWLSIAI-----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILP 441 + ++ +P++++ S I +GL + + DE ++ + + Sbjct: 385 TPENISTARPILNLMFSQLIYENIRQGLPDTNPDLKHGILMLMDEFTSIGFMEQYQVAIA 444 Query: 442 EARKFGGCYVFGIQSYAQLEDI----YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEI 497 + + Q+ QL + YG+K + +L + + +R + K AE + I Sbjct: 445 YMAGYNIRSLIIYQNQTQLAENPPLGYGDKGSQTLLENHSCNIIYRPKNPKTAEEISKRI 504 Query: 498 GEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVK 557 G + ++ ++ G G ST + ++ LV +I L D + K Sbjct: 505 GNITIINKNKSHNKG------GTSTSDNTTQRALVLPQEIMDLKDDEEIIFCNSAKIKCK 558 Query: 558 LSLKYQTRPKVAPEFIPR--DINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGED 615 + Y P FI R ++P +++ + + + + ++P Sbjct: 559 KAFFYND-----PFFIDRLKLVSPSLKDLGDKIPTKEQLDNAYQRKECQIELPNQYEAYQ 613 Query: 616 VTQAEQPQQP 625 Q E+ Q Sbjct: 614 AQQREKAQME 623 >UniRef50_B0KAV4 TRAG family protein n=6 Tax=Thermoanaerobacterales RepID=B0KAV4_THEP3 Length = 610 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 151/442 (34%), Gaps = 41/442 (9%) Query: 186 QNFCLHGTVGAGKSE-VIRRLANYARQRGDMVVIYDRSGEFVKSYY----DPSIDKIL-- 238 + + G +GKS +I + G+ +++ D GE + + IL Sbjct: 153 THGLVIGATRSGKSRRIILPTIWTLARAGESMIVSDPKGELHSYSFKYLKELGYKVILID 212 Query: 239 --NPLDARCAAWDLWKECLTQ----------PDFDNTANTLIPMGT--KEDPFWQGSGRT 284 NP R W+ E T+ + + AN + DP W S + Sbjct: 213 LRNPY--RGNQWNPVLEIATKLEIGDYSTASQNAWDIANIITNQQPHIGVDPIWPQSQES 270 Query: 285 IFAEAAYLMRNDPNRSYSKL------VDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAI 338 + A + + L + L + E L Y R+ P + A+ Sbjct: 271 LTAALILAVASSAPHEAKHLGSVYEILHRLGADGGELLDKYFRSVPREHPAASAYGVAAL 330 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED--QKNGWLFISSNADTHASLKP 396 S + ++ + + + + ++ +FI D ++ Sbjct: 331 SEDRLRSSIFTGTAAQLRLWSDPAVIWLTSDQDHELDAVGKEKAAVFIVI-PDERSTRNV 389 Query: 397 VISMWLSIAIRGLLAMGENRN----RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 + ++++S A + L+ + +RV F DE L +PD + + A G ++ Sbjct: 390 LATLYISQAYQALVDLANKNGGRLAQRVNFVLDEFGNLPPIPDFDKKITVAAGRGMRFLL 449 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 +Q +Q++ Y + A ++ + + + A +G+ G+ +E YS Sbjct: 450 AVQDISQIKAKY-RELAQTITGNCAVWVYILTTDLETARIISGKTGQYTI--RTESYSSQ 506 Query: 513 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 T + + + L+ ++ P + PA+ L L + + + Sbjct: 507 VKHTDYSHGTTEGLTGRPLLLPDEVLRWPQDRALILQARQNPAI-LPLPDLSMWPASKDL 565 Query: 573 IPRDINPEMENRLSAVLAAREA 594 IP + E++ + +V Sbjct: 566 IPSAL-EELKKEVMSVPVWIPE 586 >UniRef50_B5E5D6 Tn5253 TraG protein n=7 Tax=Streptococcus pneumoniae RepID=B5E5D6_STRP4 Length = 625 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 77/555 (13%), Positives = 178/555 (32%), Gaps = 96/555 (17%) Query: 109 WSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD-- 166 W+ A + ++ ++ GK+Q V G K+ K+ Sbjct: 55 WNVSFTGKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYGKEFL 114 Query: 167 -----GKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDR 221 +D + + D + +N + G G+GK+ R + Q ++ D Sbjct: 115 HDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKT--FRFVKPNLIQMNSSNIVVDP 172 Query: 222 SGE--------FVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP---- 269 F++ Y + ++N ++ ++ T+ D + Sbjct: 173 KDHLAEKTGKLFLEHGYQVKVLDLVNM--KNSDGFNPFRYIETENDLNRMLTVYFNNTKG 230 Query: 270 MGTKEDPFWQGSGRTIFAEAAYLMRN--DPNRSYSKLVDT----------LLSIKIEKLR 317 G++ DPFW + T+ A + + +P ++ +L++ LL + +++ Sbjct: 231 SGSRSDPFWDEASMTLVRALASYLVDFYNPPKTREQLIEESRLSQKEYKNLLKRQKKEVE 290 Query: 318 TYLR---------------------------------------NSPAANL-----VEEKI 333 + + + + Sbjct: 291 ERKKRGRYPSFAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYK 350 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 +KT S+ AV T + T RD + ++ +++ D ++ Sbjct: 351 DKTLDSVIAVTTAKFALFNI-----QSVMDLTKRDTLDMKTWGKEKSMVYLVI-PDNDST 404 Query: 394 LKPVISMWLSIAIRGLLAMGE-----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGG 448 + + +++ S + L + V + DE + ++PD E R Sbjct: 405 FRFLSALFFSTVFQTLTRQADIDFKGQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNM 464 Query: 449 CYVFGIQSYAQLEDIYGEKAA-ASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 V +Q+ AQL+ +Y EK A ++ ++ + +F +G +G++ + Sbjct: 465 SLVPILQNIAQLQGLYKEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNT 524 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 S+G S + L++ ++ ++ C V + P K KY + Sbjct: 525 SRSFGQTG---SGSLSHQKIARDLMTPDEVGNMKRHECLVRIA-NMPVFKSK-KYNSTKH 579 Query: 568 VAPEFIPRDINPEME 582 ++ + E Sbjct: 580 PNWRYLANQESDERW 594 >UniRef50_Q7M994 CONJUGAL TRANSFER PROTEIN (TRAG) n=1 Tax=Wolinella succinogenes RepID=Q7M994_WOLSU Length = 603 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 150/445 (33%), Gaps = 70/445 (15%) Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDP---SIDKILNPL 241 + G GK+ I + + V+ D GE Y + I NP Sbjct: 171 TLVIAPPGTGKTSAI--IIPNLLSIPNSQVVIDVKGEICSLTAGYRQKKLLNQVFIFNPF 228 Query: 242 -DARCAAWDLWK-E-------CLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFA---- 287 + ++ + E +T+ P ++D W+ + +T F Sbjct: 229 GEDSNFHFNPFNLERMSKLGFAEKTAIVRQVGSTIFPKPKDEKDSHWRETAKTFFEFAAM 288 Query: 288 --------EAAYLMRNDPNRSYSK---------------------LVDTLLS--IKIEKL 316 Y + P + ++ LL + E L Sbjct: 289 HNIEKYGYTTLYEIYRFPKKDWTDELEDKYFDEKEKREELGEEVNTFRLLLRQIAENETL 348 Query: 317 RTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVRE 375 +R+ L E S+ + + + L+ E + F R Sbjct: 349 HDNIRDDARRFLGTPANE--FGSVLSTFSTKMSIFGDLRVKELTDQNSF------MPERL 400 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM-GENRNRRVWFFCDELPTLHKLP 434 + N L+I SL P+I + L ++ L++ + R++ DE+ +L Sbjct: 401 REDNITLYIKCLEKDIPSLSPIIRILLETIVKELMSRESTDPKERIYLELDEVMRFGELD 460 Query: 435 DLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAA 494 ++E+ +R + +F QSYAQ+ Y ++ + D + + FR+ + AE + Sbjct: 461 FMIELPSISRSYNLPNIFAAQSYAQIRKHYSQEDLEIMLDTVAYQVVFRANRQQAAEDIS 520 Query: 495 GEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP-- 552 E+G+ K + + ++ S E + LV+ DI ++P + G Sbjct: 521 KEVGDFTAHKKTTS----SQDIKILQSYSTSEEAKRLVTAQDILNIPKDKVLILATGHKA 576 Query: 553 YPA-VKLSLKYQTRPKVAPEFIPRD 576 P + + ++ R + I ++ Sbjct: 577 TPILAQANFYFKDRTERQKTKIKKE 601 >UniRef50_Q0ACU1 TRAG family protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0ACU1_NITEC Length = 666 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 68/412 (16%), Positives = 135/412 (32%), Gaps = 43/412 (10%) Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSID---KILNPL 241 L GK + + V+ D GE ++ + NP Sbjct: 143 VLLAAPTRTGKGVGF--VIPNLLTFRESTVVLDIKGENYNLTSAFRRKHLGNEIFYFNPF 200 Query: 242 DARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND 296 W+ P D A + + DPFW S R +F A L+ Sbjct: 201 SETTHRWNPLSYVSENPLFRVNDLRALAAIIFKTPERSDPFWSDSARNLFVAIALLVLET 260 Query: 297 PN--RSYSKLVDTL------LSIKIEKLRTYLRNSP---------AANLVEEKIEKTAIS 339 P + +++ ++ + ++ +N+ A N + T + Sbjct: 261 PRLPHTMGEILRQASGKGKDTALYLREVIAVRQNTAKPLSRECKDAINRFLNGSDDTLKN 320 Query: 340 IRAVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 I + T+ + + + + F +RD ++ ++I +A + + Sbjct: 321 ILSTFTSALGVFSSPVTDKATSADDFDLRDI------RKRKMSIYIHISAGEVMQAQFIT 374 Query: 399 SMWLSIAIRGLLAMGENRNRRV----WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 +++ S I + +N + DE K+ L + + + I Sbjct: 375 NLFFSQLINENVKELPEQNPALKYQCLLMMDEFTAARKIEILAKGVGFMAGYNMRLALVI 434 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS-YGA 513 Q+ +QLE YG++ A S+ D M + F+ K AE + +G + S Q+S G Sbjct: 435 QNNSQLESTYGKEDAHSIMDNMGVKIFYTPSQVKEAEEYSKMLGNITAIAQSTQHSNIGP 494 Query: 514 -DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 + R S + + L+ ++ L V G ++Y Sbjct: 495 LNVGRYSKSETDTLVSRALMLPQELMQLDKEKELVHRSGIPIIFGNKIRYYE 546 >UniRef50_B7JB37 TraG/TraD family protein n=3 Tax=Acidithiobacillus ferrooxidans RepID=B7JB37_ACIF2 Length = 834 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 90/590 (15%), Positives = 183/590 (31%), Gaps = 125/590 (21%) Query: 137 QGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR--------------- 181 +G + + + K+ A K+ + R+ ++P Sbjct: 192 KGLKGGSDWARWQERREKRKKEAAEWRKRRAEREKKRLSEIPEPTVFDRFDSPHVCYVGA 251 Query: 182 -----------DSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE---F 225 + ++ + +GK V+ L + D VV++D GE Sbjct: 252 FVENGAATPLQHTGAEHILVFAPTRSGKGVGLVLPTLLDGWM---DSVVVHDIKGENFHL 308 Query: 226 VKSYYDPSIDKIL--------------NPLDARCAAWDLWKECLTQPDFDNTANTLI-PM 270 Y IL NPLDA E D N A ++ P Sbjct: 309 TAGYRKAMGHHILKFSPGSVSEEGCHFNPLDAVRVG--TQYEVK---DVMNIATMIVDPD 363 Query: 271 GTKEDPFWQGSGRTIFAEAA-YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRN------- 322 G + WQ +G + +++ P+++ + L +E + Sbjct: 364 GKGLNDHWQKTGFALLTSIILHVLYAMPDKTLRGVAAYLNDPTLESVDVAFERMMQTEHD 423 Query: 323 ---------------------SPAANLVEEKIEKTAISIRAVLTNYVKAIR-YLQGIEHN 360 + +A + K E + + + +++ R + Sbjct: 424 PDEQYGWRDGNGQCSRVHPVIAQSAREMLNKAENEKSGVISTMMSFLSLYRDPIVAKWTE 483 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE------ 414 F I D +++ ++ L++ ++ + LKP+I + L+ A Sbjct: 484 YSDFRIAD----LQDAEQPVSLYLVTSPEDKNRLKPLIRLVLNQIASQFTAEERLEAKDG 539 Query: 415 ----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI---YGEK 467 R+ DE P+L KL ++ + + Q AQLED YG+ Sbjct: 540 RIVAKGKHRLLLLLDEFPSLGKLDVFLDSIAFLAGYNVKLYLITQDIAQLEDEGHGYGKA 599 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD--PVRDGVSTGKD 525 A ++ + RA + + A++ + +G + ++ S+ G ST Sbjct: 600 GAKTIIGNCHIRAAYAPNQVETAKWISDMLGTRTVTMENDNQSFDGSLFGQNKGYSTSLS 659 Query: 526 MERQTLVSYSDIQSL--PDLTC---------YVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 + + L++ ++ +L P+ V G +P L Y P+ Sbjct: 660 YQSRPLLTADEVMTLRGPEKEGANIKTPGDMLVFAAGFHPIYGQQLLYFKNPEW------ 713 Query: 575 RDINPEMENRLSAVLAAREAE-----GRQMASLFEPDVPEVVSGEDVTQA 619 D S + + G +L P + + G+D + Sbjct: 714 LDRASMRWPEKSDSIPGARKDYKAILGESGGTLPIPHIEKKPEGQDPVEE 763 >UniRef50_UPI0001B44E8D hypothetical protein CdifQCD-6_07437 n=1 Tax=Clostridium difficile QCD-63q42 RepID=UPI0001B44E8D Length = 625 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 79/511 (15%), Positives = 169/511 (33%), Gaps = 62/511 (12%) Query: 104 CSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARML 163 A + ++ + F ++ + + K+ +E G + PKD+ Sbjct: 66 AFSDFSPGLNPADWLIGIVGAVAFRLLIYFKSKNAKKYRRDEEYGSSRW-GCPKDIQPFA 124 Query: 164 KKDGKDSDIRIGDLPI--------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM 215 +++ I G + ++ N C+ G+ G+GK+ L Q Sbjct: 125 DPKFENNVILTGTERLTMNTRPKNPANARNLNACIIGSSGSGKTR--FWLTPQLLQAHSS 182 Query: 216 VVIYDRS-------GEFVKSYYDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTANTL 267 V D G F++ K+ N +D ++ ++ + D N L Sbjct: 183 YVCVDPKSSVLSQVGSFLQG--RGYKIKVFNSIDFSKSMHYNPLAYIKNEADILKFVNAL 240 Query: 268 IPMGTKE----DPFWQGSGRTIFAEAAYLMR---NDPNRSYSKLVDTLLSIKIEK----- 315 I E DPFW + ++ + + R+ + LVD + S+++++ Sbjct: 241 ISNTKGEGKEGDPFWTKAETLLYCALLGYIIFEGAEEERNMNTLVDMISSMEVKEDDEDF 300 Query: 316 ---LRTYLRNSP-------AANLVEEK---IEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 + + A ++ KTA SI + I E Sbjct: 301 LNAVDYMFKGLEQRKPDCFAVKQYKKYKLSSGKTAKSILISCGARLAPF----DIPQLRE 356 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN-----RN 417 + + D++ F S+ D ++ ++++ S L +N Sbjct: 357 IMSYDELELDRMGDRRTATFFCISDTD--STYNFLVALAFSQMFNLLCERADNVHGGRLP 414 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 V DE ++P L +++ R V Q AQ + IY + A ++ M+ Sbjct: 415 HHVRVLWDEAANTGQVPGLEKLVAVIRSREVSLVLLYQQLAQCKAIYDKH-AETILGNMD 473 Query: 478 TRAFFRSPSHKIAEFAAGE-IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 + F + + +G+ ++ + G + S + L++ ++ Sbjct: 474 SVIFLGGRESSTIKEISENWLGKATISMQTDGRTRGQS---ESYSQNNQRLGRELMTTAE 530 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 + ++P C + L G P + P Sbjct: 531 LATMPGDRCILQLRGLPPFYSKKYDLKQHPN 561 >UniRef50_Q8GJE7 VirD4 n=1 Tax=Campylobacter jejuni subsp. jejuni 81-176 RepID=Q8GJE7_CAMJJ Length = 628 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 102/577 (17%), Positives = 179/577 (31%), Gaps = 101/577 (17%) Query: 111 AFVLAAVVALVICLITFFV-VSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK- 168 A L A VA+ ++ F V + W Q + E G + KD M + + Sbjct: 56 ALKLKAYVAVFALILPFIVCLIWFFMP---QMNLKENYGNARFAK-EKDFEEMNICNDRG 111 Query: 169 -------DSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDR 221 I+ ++ IR + + G GK+ I + + + D Sbjct: 112 LILGCNIKKGIKGDEIEYIRAKMPLSALVVAPPGTGKTSGI--ILPNLFTVPNSTLALDI 169 Query: 222 SGEFV-------KSYYDPSIDKILNPL-DARCAAWDLWKE--------CLTQPDFDNTAN 265 GE K Y++ I + P D ++ + D A Sbjct: 170 KGELYAKSAGYRKKYFNNEI-LLFEPFSDNNTLFFNPFDNSIVKDMNFIQMMKLADQIAG 228 Query: 266 TLI-PMGTKEDPFWQGSGRTIFAE-AAYLMRNDPNRSYSKLVDTLLS------------- 310 T+ KE W S +T+F A Y M+ + S L Sbjct: 229 TIFVAEKGKEGDHWVTSAKTLFTFFALYNMQKHKHTSLGDLTQAPKKDYFNELNEEFGKE 288 Query: 311 ---------------------------IKIEKLRTYLRNSPAANLVEEKIEKTAISIRAV 343 E L +RN A E+ SI++ Sbjct: 289 CLIEDEDTGEVSRDYNVDTFKVFLKQVANDENLDEIVRNQARAYQTA--AEQEFASIKST 346 Query: 344 LTNYVKAIRYLQGI-EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 Y+K Q + F D +K +++ + L P++ +++ Sbjct: 347 YDTYMKVFTNPQVANATSKMNFRFEDL------REKRITMYVVIQTEDMDILAPLVRIFI 400 Query: 403 SIAIRGLLA--MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 + L++ N ++ ++ DE K+P L+E R +G VF QSY Q+ Sbjct: 401 ESLFKKLMSGQENSNPDKFIYCLLDEFVRFGKMPFLLEAPALCRSYGLIPVFVTQSYEQI 460 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 YGE + + FR + K A+ + IG + + S G Sbjct: 461 RKYYGEDDLGIIRANAGYQTIFRMNTEKDAKEISDLIG--DFTREKTSSSKGTFDFFKSN 518 Query: 521 STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY-PAVKLSLKY-QTRPKVAPEFIPRDIN 578 +T E L++ DI++ + + G +K + Y PK+ Sbjct: 519 NTV-SKEGYKLITSQDIKNQSSEDILILVTGFLSRPIKAKVPYWFKNPKLKGA------- 570 Query: 579 PEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGED 615 +++S EG D + V+ E Sbjct: 571 ----DKISLEDNNTNTEGESKNDEINNDDSQNVNQEQ 603 >UniRef50_C6NY79 TraG n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NY79_9GAMM Length = 857 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 97/691 (14%), Positives = 208/691 (30%), Gaps = 127/691 (18%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 Y W + A +A +A V L R + Q + ++ G + V Sbjct: 85 YAEWQYPMMQKATEIAGAIAAVPTLAMGIWQFVRSQRLWQSQYQTDLHGSAHWASRDEIV 144 Query: 160 ARMLKKDGKDSDIR----------IGDLPIIRDSE-------IQNFCLHGTVGAGKSE-- 200 L D + +G +P RD ++ +GK Sbjct: 145 KMALLPDKGLHPAKGQKPSKRVCYVGGIPNERDETDYLQHAGAEHIICFAPTRSGKGVGL 204 Query: 201 VIRRLANYARQRGDMVVIYDRSGE---FVKS----------YYDPSIDKILNPLD----- 242 V+ L ++ VV++D GE ++P +PL+ Sbjct: 205 VLPTLLGGWQE---SVVVHDIKGENYLLTAGWRKSIGQKILKFNPGFGMAADPLNGMEAD 261 Query: 243 --------ARCAAWDLWKECLTQPDFD-----NTANTLI-PMGTKEDPFWQGSGRTIFAE 288 +C ++ +E F+ N A ++ P G + WQ +G + Sbjct: 262 NNGDLGTKEQCCHFNPLEEVRVGTPFEVKDVMNIATMIVDPDGKGLNDHWQKTGFALLTS 321 Query: 289 AA-YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRN------------------------- 322 +++ +P+++ + L ++E + Sbjct: 322 VILHVLYAEPDKTMRGVAAFLNDPELEDVDQAFDKMMDTQHRPSNPVLLKQWTALYGNAT 381 Query: 323 -----SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI-EHNGEPFTIRDWMRGVRED 376 + +A ++ K + + + +++ R F I D +++ Sbjct: 382 VHPAIAQSAKEMKNKAPNEKSGVISTMMSFLSLYRDPIVAEWTEYSDFHITD----LQDA 437 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE----------NRNRRVWFFCDE 426 L++ ++ + LKP+I + +++ A + DE Sbjct: 438 DAPVSLYLVTSPEDKNRLKPLIRLVINLIASKFTAEDRLIPKDGRMICKGKHPLLLLLDE 497 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI---YGEKAAASLFDVMNTRAFFR 483 P+L K+ + + + QS +QLED YG+ + + + + R F+ Sbjct: 498 FPSLGKMDIFQDAIAFFAGYNVKLFLITQSKSQLEDEGRGYGKSGGSVIIENCHVRIFYA 557 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSYGAD--PVRDGVSTGKDMERQTLVSYSDIQSL- 540 AE+ + +G+K + + S P G S + + + L++ ++ L Sbjct: 558 PNDVTTAEWLSKMLGKKTVVLENVTQSLEGSVLPSPKGQSRSLNYQARDLLTPDEVLRLR 617 Query: 541 ----------PDLTCYVTLPGPYPAVKLSLKYQTRP------KVAPEFIPRDINPEMENR 584 V + G P + Y P ++ P +I+ ++ Sbjct: 618 GPIKRGSNIVKAGDMIVMVAGFAPVYGRQILYFKNPTFLERAQIPPPATSDEISARAKDY 677 Query: 585 LSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPV----SPAI-NDKKSDSGV 639 + +L + + E + SPA D D Sbjct: 678 YAKLLGHDKPTSIESTKPDFDTFEESDYTDTPPAGSSAADGSPADGSPAGPADGSLDPTN 737 Query: 640 NVPAGGIEQELKMKPEEEMEQQLPPGISESG 670 + A + P + G S++ Sbjct: 738 SDTAPRSGADGSSAPRSGAPRSGADGTSDTR 768 >UniRef50_UPI0001B497B1 TraG family mobilization protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B497B1 Length = 651 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 85/613 (13%), Positives = 196/613 (31%), Gaps = 66/613 (10%) Query: 28 IMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKT 87 +++ + IF W+LV + S + + + ++ + + K Sbjct: 17 VIIGGVIIFQWVLVNDLCSP--SPAVLLQLGKFLRKAIMFRFLYVVLLAGLAFLFPVQKR 74 Query: 88 FRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVT 147 + V +I + + + L++ I F + ++ + + V Sbjct: 75 RDESLKYVYTATTLILAIALILGFSNVLSWYNLLVFPIVFIGFTILVIQTAGFYLKRHVV 134 Query: 148 GGRQLTDNPKDVARM-LKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEV-IRRL 205 + + + + + + ++RI QN + G G+GKSE I+ + Sbjct: 135 SDKSIFGVSHEKSEFYFDFETVEGNLRI-------HKPQQNLYIDGGPGSGKSESWIKGI 187 Query: 206 ANYARQRGDMVVIYDRSGE---------------FVKSYYDPSIDK----ILNPLD-ARC 245 +R +YD G+ ++ + ++ +N +D +R Sbjct: 188 IYQCAERNYAGFVYDWEGDPSKPGSPILSRIAYGSIEYFKRKNVPTPAFAFINFVDMSRT 247 Query: 246 AAWDLWKECLTQPD-----FDNTANTLIP----MGTKEDPFWQGSGRTIFAEAAYLMRND 296 ++ E N A TL+ ++ FW + AY + Sbjct: 248 VRVNVLSEKYVPKGSESLFIRNIATTLMKNLESSWKEKTDFWANNAINYVYSIAYKCYKE 307 Query: 297 PNRSYSKLVDTL----------LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTN 346 + L + E L S ++ + Sbjct: 308 RAKGIGTLPHVIAFALSDSDLVFKWLSEDAEIALNMSSMLTAWRLGAQQQTAGAVSSAQT 367 Query: 347 YVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI 406 + + + I P ++ + L I + ++ P +S S+ + Sbjct: 368 PLVLLNN-KYIFWVLSPLPEEEYSLDITNPDHPTLLCIGNAPSIKEAVSPPVSCIASVVM 426 Query: 407 RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGE 466 M ++ F DE PT++ L + + ARK + +Q + Q YGE Sbjct: 427 SQ---MNNPGKQKSVFMVDEFPTVN-LQGIDVFIGTARKHNVATILAVQDFNQAIRDYGE 482 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 K+A L ++A+ + + K A+ +G E +A E +S+ S + + Sbjct: 483 KSANILRSSCGSQAYGMTGNEKTAKDLENLLG--ETKEAQESFSH---QESGTGSMTESL 537 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPA---VKLSLKY---QTRPKVAPEFIPRDINPE 580 +++ +V ++ + G P + ++ + P + D E Sbjct: 538 QKEKVVKAREVAGQSVGHFIGKVAGGKPPYFNTQFNMCKFIDKDIPAFSKPVNLGDGKEE 597 Query: 581 MENRLSAVLAARE 593 +E + + ++ Sbjct: 598 LEYDIMEEIVSQH 610 >UniRef50_A3T2K0 Type IV secretion system coupling protein n=6 Tax=Rhodobacterales RepID=A3T2K0_9RHOB Length = 646 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 97/598 (16%), Positives = 185/598 (30%), Gaps = 48/598 (8%) Query: 113 VLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD- 171 V + + +W R+ + +L ML+ G+ Sbjct: 63 VAFGAIGFGAIGLGVLAFAWTFQRERSEYGTAHWQSKAELKK-----NDMLQDAGRGFVC 117 Query: 172 IRIGDL----PIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSG-- 223 +IG P I + I + + AGK VI L +A VV+ D G Sbjct: 118 GKIGKPNSKGPFISSTVIPHVMMVAPTRAGKGVGFVIPNLLGFAGS----VVVLDVKGEN 173 Query: 224 -EFVKSYYDPSID--KILNPLD--ARCAAWDLWKECLTQPDFDN-------TANTLIPMG 271 + + D +P D ++ P F A+ + Sbjct: 174 FDKTSRLRALNGDEVYRFSPFDWSNATHCYNPLIRIAKAPSFAQRFTEVSILADLFLDKD 233 Query: 272 TKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLR-TYLRNSPAANLVE 330 K + +G++IF A L + ++ + + + +V Sbjct: 234 NKTLDTFSEAGKSIFVAACLLAIQRGRATLGEVNRIVAGGDYKNAQYKAYAEEAEEPVVR 293 Query: 331 EKIEKTAISIRAVLTNYVKAIR---YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 E A + +LT+ ++A+ Q T R + +K L+I + Sbjct: 294 ELWTNAASASSRLLTSNIQALMTAGLKQWDNPAVRAATRRSDIDFSIFRKKPQSLYIVVS 353 Query: 388 ADTHASLKPVISMWLS--IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARK 445 D A+L P++ + + IA L GE+ V DE + +P L + Sbjct: 354 EDHIATLAPLLRLLFADLIASLRLNEPGEDEPWPVMIMIDEFQQMGAMPYLERAIHSLAS 413 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 +GG QS A L+ IYG + SL + + + + + +G Sbjct: 414 YGGRVAMIAQSLASLDRIYGPEGRESLENGAGLKLYITPRDQRTVREVSAAVGSTTREAV 473 Query: 506 SEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR 565 + Y + ST +E + L+S ++ + + + +P +KY Sbjct: 474 TRMYGRNKGVL-GATSTSSRLEERPLLSETEARLMDPDEVIILASPQHPIKAQRIKYYDD 532 Query: 566 PKVAPEFIPRDINPE-MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQ 624 P ++ + V E E +Q + G Sbjct: 533 PLFKELVEKQEGRAFPYPPNVEGVGPWEEVEPKQGKND-------AAGGTSEQAKPASPP 585 Query: 625 PVSPAINDKKSDSGVNVPAGGIEQEL--KMKPEEEMEQQLPPGISESGEVVDMAAYEA 680 A+ + + A G ++L P+E + + + E + +D E Sbjct: 586 EDRNAL-REARAMMLGQDASGETEDLHPTPHPDEPLPPEWEDVLLEQSDFLDALMEEQ 642 >UniRef50_Q00184 Conjugal transfer protein traG n=32 Tax=root RepID=TRAG5_ECOLX Length = 637 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 81/474 (17%), Positives = 158/474 (33%), Gaps = 67/474 (14%) Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV------KS 228 G+ +R S ++ + +GK + + G VI D GE + Sbjct: 165 GNFFYLRHSGPEHVLTYAPTRSGKGVGL--VVPTLLSWGASSVITDLKGELWALTAGWRQ 222 Query: 229 YYDPSIDKILNPL-DARCAAWDLWKECLTQPDFD-----NTANTLI-PMGTKEDPFWQGS 281 + + P + W+ E +++ N A ++ P G D WQ + Sbjct: 223 KHAKNKVLRFEPASTSGGVCWNPLDEIRLGTEYEVGDVQNLATLIVDPDGKGLDSHWQKT 282 Query: 282 GRTIFAEAA----YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI---- 333 + Y ++D + VD +L+ + V+ + Sbjct: 283 AFALLVGVILHALYKAKDDGGTATLPSVDAMLADPNRDIGELWMEMATYGHVDGQNHHAI 342 Query: 334 -----------EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWL 382 E+ A S+ + +Y+ R + N R ++ + + L Sbjct: 343 GSAARDMMDRPEEEAGSVLSTAKSYLALYR-DPVVARNVSRSDFR--IKQLMHEDDPVSL 399 Query: 383 FISSNADTHASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLP 434 +I + + A L+P++ + +++ +R L + + R+ DE P+L KL Sbjct: 400 YIVTQPNDKARLRPLVRVMVNMIVRLLADKMDFEGGRPVAHYKHRLLMMLDEFPSLGKLE 459 Query: 435 DLVEILPEARKFGGCYVFGIQSYAQLEDI---YGEKAAASLFDVMNTRAFFRSPSHKIAE 491 + E L +G Q QL+ YG S+ + + + + AE Sbjct: 460 IMQESLAFVAGYGIKCYLICQDINQLKSRETGYGHD--ESITSNCHVQNAYPPNRVETAE 517 Query: 492 FAAGEIGEKEHLKASEQYS-YGADPVRDGVSTGKDMERQTLVSYSDIQSLP----DLTCY 546 + G+ +K S + VS ++ L++ + +P + Sbjct: 518 HLSRLTGQTTVVKEQITTSGRRTAAMLGQVSRTYQEVQRPLLTPDECLRMPGPKKNAQGE 577 Query: 547 VTLPGP-------YPAVKLSLK-YQTRPK-VAPEFIPRDINPEMENRLSAVLAA 591 + G YPA+ Y P A IP P++ +RL AV A Sbjct: 578 IEEAGDMVIYVAGYPAIYGKQPLYFKDPVFSARAAIP---APKVSDRLRAVAQA 628 >UniRef50_B4S9K8 TRAG family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9K8_PROA2 Length = 723 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 112/697 (16%), Positives = 228/697 (32%), Gaps = 61/697 (8%) Query: 39 ILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRD-LIKSQPVYEIQYYGKTFRMNAAQVLH 97 + GL+ + +W G +I PVYE + F + Sbjct: 14 VATGLLFMLLGTWAATQYVAFLLGYQPQLGEPLMIIGGYPVYE--PWAWMFWSYHFEPYA 71 Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLI---------TFFVVSWILGRQ----GKQQSEN 144 + S +++F A V +V+ ++ T+ W ++ G E Sbjct: 72 PHVFEYASRITYASFFAMAGVMVVLSILRAKRQRQAGTYGTARWATEKELDEAGILAEEG 131 Query: 145 EVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRR 204 V + V+R + ++ I+R + ++ +GK + Sbjct: 132 IVLAQTRDARYASAVSRHNGEAEVKWVMKKPGAAILRHNGPEHVFCFAPTRSGKGVGL-- 189 Query: 205 LANYARQRGDMVVIYDRSGEFVKSYYDPSIDK----ILNPLDARCAAWDLWKECL----T 256 + V+YD E + P ++ E Sbjct: 190 VIPTLLAWKGSCVVYDIKKENWAATAGWRRQFSHCWCFEPTSPHSVRFNPLMEIRQGDNE 249 Query: 257 QPDFDNTANTLIPMGTKED--PFWQGSGRTIFAEAA-YLMRNDPNRSYSKLVDTLLSI-- 311 D N A+ L+ +D W+ +G + A +++ + +++ S + L + Sbjct: 250 VRDVQNVADILVDPEGVKDRLDHWEKTGHALLVGAILHVLYAEEDKTLSGVAGFLANPGR 309 Query: 312 KIEKL------RTYLRNSPA------ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 IE+ +L P A + K E + + +++ R Sbjct: 310 SIEETLGMMLSHHHLEGHPHPVVASCAREMLNKSENELSGVLSTAMSFLGLYRDPVIARS 369 Query: 360 NG-EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM----GE 414 F I D M+G + L++ KP+I + L+ R L + Sbjct: 370 TAVSDFRISDLMQG----DRPVSLYLVVPPSDIDRTKPLIRLMLNQMGRRLTEKIGFGKK 425 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + R+ DE P+L +L L +G + QS Q+E +YG+ A + D Sbjct: 426 HYRHRLLMMLDEFPSLGRLGFYETELAYMAGYGIKCIMIAQSLNQIEKVYGQNNA--ILD 483 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA-DPVRDGVSTGKDMERQTLVS 533 + R + + + A+ + +G+ + Y+ P V + + L++ Sbjct: 484 NSHVRITYGALDERTAKRISDLLGQATEKRQQLNYAGNRLAPWLGHVMQSEQESPRPLLT 543 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLS--LKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 +I LP V + G P + + YQ R + P PE + + A Sbjct: 544 PGEILQLPGDDALVMI-GGLPPYRAKKLMYYQDRRFEGMAWRPAPDTPEEQQKELPEHVA 602 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL- 650 A + E + P A +D +S+ ++ ++ + Sbjct: 603 PPAWMDYASERNETRYDTSYIDASGCSCGEGSGPGMSAHDDDESEEHQDLQHDHEQEHVL 662 Query: 651 -KMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENH 686 +M PE+E+ + + P +E E + ++ E+ Sbjct: 663 ERMHPEDELYEGIIPEHAEDDE-ASVPGHQQPADESE 698 >UniRef50_C7N7M2 Type IV secretory pathway, VirD4 component n=2 Tax=Slackia RepID=C7N7M2_SLAHD Length = 627 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 87/549 (15%), Positives = 162/549 (29%), Gaps = 92/549 (16%) Query: 132 WILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLH 191 W R+G++ + + + +A + R +N + Sbjct: 98 WGTRREGRRFMDLKDPRNNLILTEHYGMAMSRPDHDR------------RYERNRNVLVI 145 Query: 192 GTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP----SIDKI-LNPLD-ARC 245 G G+GK+ + Q ++ D GE + + N +D + Sbjct: 146 GGSGSGKTRG--YVEPNIMQMNASYLVTDPKGETLPRMGRMLEANGYEVASFNTVDFSAS 203 Query: 246 AAWDLWKECLTQPDFDNTANTLIPMGT-----KEDPFWQGSGRTIFAEAAYLMRND---P 297 ++ + D LI T +DPFW+ + R ++ + Sbjct: 204 MHYNPLAYIKDEADILEFVTCLIENTTCEGRQAQDPFWENAERLLYVALIGYLVYHCPAR 263 Query: 298 NRSYSKLVDTLLSIKIEK--------LRTYLRNSP-AANLVEEKIEKTAI---SIRAVLT 345 +RS S LV L K ++ L LV + A + R + Sbjct: 264 DRSLSGLVTLLSLAKAKESDEDFKSPLDLLFEEIETGVRLVADDSAGEAGFDPARRGSFS 323 Query: 346 NYVKAIRYLQGIEHNG--------------------------------EPFTI------- 366 +R ++ + EPF I Sbjct: 324 PSGAGVRRVRVADPVDVDSDFCLLHYKMFKDAAGKTLKSILVSCNTRMEPFAIPQVRELV 383 Query: 367 --RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM-----GENRNRR 419 + D + +DT + + ++ L + L G + Sbjct: 384 SYDEMALDRLGDPGAKRAVFAVMSDTSSLYSFLFAIMLWQTMNMLCERALKEYGGSLPTP 443 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 V DE + KLPD+ ++ R +QS +QL+ Y E +A++ D +T Sbjct: 444 VHLVLDEFANIGKLPDVERMVAVIRSRNISMSVILQSMSQLKARY-EDDSATIVDCCDTT 502 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 F S + + + +G++ + S GA P + + + LV +++ Sbjct: 503 LFLGGKSTETVKEISETVGKETVGTVTWSESRGAMPSS---TRNWNTIERDLVQGAEVAK 559 Query: 540 LPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAARE-AEGRQ 598 LP V + G P + P + P RE EGR+ Sbjct: 560 LPRDEAIVLITGTDPLKDKKYDIASHPMWPQAY-PGHPGALFSEPYDFAARLREMREGRE 618 Query: 599 MASLFEPDV 607 D Sbjct: 619 DGGGAASDA 627 >UniRef50_A4J358 TRAG family protein n=2 Tax=Desulfotomaculum RepID=A4J358_DESRM Length = 912 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 91/574 (15%), Positives = 187/574 (32%), Gaps = 45/574 (7%) Query: 166 DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGE 224 + K + +P + +G GAGKS ++ G +V+ D GE Sbjct: 216 ERKIIRVNFEKVPDDTPKTAPHLLAYGGTGAGKSYSLVSGNIISGVSDGQSLVLIDPKGE 275 Query: 225 FVKSYYD----PSIDKI--LNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGTKEDP- 276 K++ + + LN + + W+ EC + +TL +P Sbjct: 276 LFKTFAKWLNAMGYENVWALNFMTPQHSHRWNSVIECQDDAEISEMVDTLSINTVGPNPS 335 Query: 277 FWQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIE 334 ++Q + L++ D + + + ++TL + +EKL + + A + I Sbjct: 336 YFQLKAMELMEAIIGLLKGDFPVEQQHMRAINTLAAWPLEKLDARFKEAYQAERISATIY 395 Query: 335 KTAISIRA-----VLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNAD 389 + + ++N ++ L + ++ +K I Sbjct: 396 ERWRGVAKENYGYAVSNLTAVLKNL-TTSPLAALMSEKEIDLSEIGRKKTALFLIIPTGG 454 Query: 390 THASLKPVISMWLSIAIRGL-----LAMGENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 LKP++SM+ + L + GE V DE+ + +P L EI+ AR Sbjct: 455 EGVYLKPILSMFYKFLFKRLDKLAFTSPGERLPVPVRNVWDEMANVGVIPGLPEIISTAR 514 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR--SPSHKIAEFAAGEIG--EK 500 G + +Q+ QLE +YG A ++ T +A+ + +G Sbjct: 515 SKGIHIMMILQTPTQLESLYGRDDAKTITGNCPTVMMIGIAPADRDLAKMFSEILGTAAV 574 Query: 501 EHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL 560 E K SE + + K + + L++ S+I + C L P + Sbjct: 575 EAYKVSEDRTVPGKHWFEFSKKTKTVIERPLMTMSEIFKIDPRYCIALLQWSNPVYLKKV 634 Query: 561 KYQTRPK----------VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEV 610 + P+ E+IP + + E + E ++P Sbjct: 635 GWTKLPQAKDIRRCGMLPIKEYIPARSFDISLPGDDILSSNNEELSLAFINQDEQEIPSQ 694 Query: 611 VSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESG 670 +P++ +K + E+ +++ P ++ Sbjct: 695 KVELSKVPGTKPEKEFISTKGEKI--ISLGSFLNNWEKA--PPDNKQINGDTPTAVTNEI 750 Query: 671 EVVDMA-----AYEAWQQENHPDIQQQMQRREEV 699 EV A E + + ++ E + Sbjct: 751 EVTAPGAAPPTASEQISGDIVEITWNENKQEEMI 784 >UniRef50_A4TUK6 Conjugal transfer protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUK6_9PROT Length = 602 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 90/582 (15%), Positives = 177/582 (30%), Gaps = 81/582 (13%) Query: 101 MIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQS----ENEVTGGRQLTDNP 156 + + A + ++ I R G Q + + G Sbjct: 41 YLQAYGHVPGFIQWGIFGATAGTIALILLIQAIAMRIGGQTRHGSYDEKNLHGSARWARK 100 Query: 157 KDVAR--MLKKDGKDSDIRIGDLPIIRDSEI------QNFCLHGTVGAGKSEVIRRLANY 208 DV +L+K G + +G P R ++ ++ +GK + + Sbjct: 101 ADVKEAGLLRKTG----VVVGGWPKWRGAKTLRHDGPEHILTFAPTRSGKGVGL--VLPT 154 Query: 209 ARQRGDMVVIYDRSGE---FVKSYYDPSIDKIL--NP-LDARCAAWDLWKECLT-----Q 257 V++ D GE + +IL +P + ++ E Sbjct: 155 LLSWPSSVLVLDIKGENWRLTSGWRASQGQRILKFDPTAEEGSCHYNPLAEVRIGTGHEV 214 Query: 258 PDFDNTANTLI-PMGTKEDPFWQGSG-----RTIFAEAAYLMRNDPNRSYSKLVDTLLSI 311 D N A +I P G FWQ SG I + R++ + +D +L+ Sbjct: 215 ADAQNIATMIIDPDGKGLADFWQKSGYAWLTGAILYTLYKIRRDENRIASLPDIDAVLTA 274 Query: 312 KIEKLRTYLR-------NSPAA-NLVEEKIEKT---AISIRAVLTNYVKAIRYLQGIEHN 360 E L + L + AA L++ ++ A R+ + + K L Sbjct: 275 VGEGLDSLLADMVSVEAGTEAATRLIQAAAQEMRDRAAQERSGVQSSSKVDLSLYRDPMI 334 Query: 361 GEPFTIRDW-MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL-----AMGE 414 + D+ + + + L+I L+P++ + L++ +R L+ Sbjct: 335 ARNISGSDFRLDELMNSEAPLSLYIIIPPSDIDRLRPLLRIILNLFMRRLMQNVGADGRA 394 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 R+ DE ++ KL L +G IQ QL+ YG++ S+ Sbjct: 395 THKHRLLLMLDEFTSIGKLEIFERSLAFMAGYGLKAFLIIQDLLQLQGTYGKE--NSIMG 452 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS-YGADPVRDGVSTGKDMERQTLVS 533 + R + A+ + G+ ++ S + V+ + L++ Sbjct: 453 NCHIRIAYAPNDVTTAKTLSDMCGKATIVQTKRSRSRRALQVIGGNVTDNVSEVGRPLLT 512 Query: 534 YSDIQSLP--------------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINP 579 + L V G P + L Y D Sbjct: 513 PDECMRLKAARKSRRDPEKIVEAGDMLVFSAGAPPILGRQLLYFF-----------DKTL 561 Query: 580 EMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQ 621 +R++ V A + EP +P ++ + Sbjct: 562 LARSRMAPVGTVEAANDESVPQA-EPPMPSPITARLRAAGQS 602 >UniRef50_Q30Q33 Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30Q33_SULDN Length = 502 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 78/454 (17%), Positives = 156/454 (34%), Gaps = 43/454 (9%) Query: 164 KKDGKDSDIRI-----GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI 218 + + S ++ + I S +++F L + GK+ + + D +++ Sbjct: 81 RFKRELSPLKFPFFKPAQIHIPALSFVESFLLIAPMKGGKTTTLMNWID--NDFYDRMLV 138 Query: 219 YDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFW 278 ++ G+ + +Y+ D ILNP D R + WDL E + +F N L TK++ F+ Sbjct: 139 NEQKGDMLTKFYNKRKDFILNPFDERGSCWDLMSEPIPIIEF-YIVNAL-NEATKDESFF 196 Query: 279 QGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAI 338 S R +++ A L + + + + +L + N +K K Sbjct: 197 SSSARERYSQIAKLTIDIQDP------KEKWKVFLAELEYMFKEIETGN---QKSAKDVA 247 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 S ++ ++ +L IE + FTI DW R+ Q W+ + + SL P+ Sbjct: 248 STMKLILEPLQMTAFL--IEQGKKSFTISDWYE--RKHQSKIWMLMKN--TYRISLNPLF 301 Query: 399 SMWLSIAIRGLLAMGE--NRNRRVWFFCDELPTLHKLPDLVEIL-PEARKFGGCYVFGIQ 455 + + + + E F DE +++ + + +IL R G + +Q Sbjct: 302 TGFTACVAMHQASQPEYVVSKSITAFLLDEYLSINLIMEARKILHTMTRSKGSAILSALQ 361 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 E+ L F E +IG+ E YG Sbjct: 362 KLPS-----DEEERDLLISTCFGLMIFSVQDISTREILDKKIGKWE---------YGIYK 407 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSL-PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 + + + ++ +S++ L + LP Y P + +FI Sbjct: 408 TVNNHQ-SETTKESNILDWSEMDKLSANFHHVTYLPESGALYVGKSDYVDYPMIHKDFIY 466 Query: 575 RDINPEMENRLSAVLAAREAEGRQMASLFEPDVP 608 + + + + AS Sbjct: 467 DTKVDDFYRWQNEEYQKTKNKKSNGASATMQAAQ 500 >UniRef50_A3IZA3 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZA3_9CHRO Length = 645 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 72/425 (16%), Positives = 143/425 (33%), Gaps = 82/425 (19%) Query: 188 FCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGE---------FVKSY-------- 229 + G G+GK+ VI + A ++G +V+YD + F+ +Y Sbjct: 116 IEVVGKSGSGKTFSVINPMLLSAIKQGHPIVLYDAKADERGADGQTPFILTYAKSQGYDV 175 Query: 230 --YDPSIDK--ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM----GTKEDPFWQGS 281 + P +NPLD ++C + A T G K+D F+ + Sbjct: 176 KVFSPGRPFSCTINPLD-------FMRDCNDKAMASVIAKTFQENLRGNGDKKDGFFGPA 228 Query: 282 GRTIFAEAAYL----------MRNDPNRSYSK--LVDTLLSIKIEKLRTYLR-------- 321 G + +N N + + + + + L T + Sbjct: 229 GERLMTALLQYAKFTQEWAISTQNHKNATDLEKQMASGIAHYQTADLATAFKFLGLSDFP 288 Query: 322 ------------------NSPAANLVE-EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 P ++ + T+ I + ++ ++ + Sbjct: 289 KRLATAKENSSPYLPYWVRQPFQQIISVKDAAPTSGGIIGQANDLLEELQQPHFLPSYTG 348 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWF 422 + + + L S+ + P+I+ ++I + L R+ + Sbjct: 349 KTNVNLML------GRKQLLVFQSDRQRRNVVNPLIAAIMTILVN--LNFATKRDCPLIL 400 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF 482 DE PTL L ++ E R G + G Q + QLE YG + + + N R +F Sbjct: 401 SIDEFPTL-TLNEVPNWANELRSKGLVLILGYQEFNQLEKAYGRENSEIIRGPANHRFWF 459 Query: 483 RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDG-VSTGKDMERQTLVSYSDIQSLP 541 + K A+ + +G+ E + ++ S G ST + + + L+S +I S+ Sbjct: 460 NPGTQKTAKELSDFLGQTETIVKNKSRSRNFGMNGGGSQSTSEQVMQLPLMSADEINSMI 519 Query: 542 DLTCY 546 C Sbjct: 520 QGECI 524 >UniRef50_A3W6B6 Type IV secretion system coupling protein n=1 Tax=Roseovarius sp. 217 RepID=A3W6B6_9RHOB Length = 643 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 83/511 (16%), Positives = 171/511 (33%), Gaps = 70/511 (13%) Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS--------------YYDP 232 + + G GK + VI D GE + Y+ P Sbjct: 146 HAMMIAPTGRGKGVGF--VLPNLLHFQGSAVILDVKGENFEKTSIHRQKALNNQVWYFSP 203 Query: 233 SIDKIL----N-PLDARCAAWDLWKECLTQPDFD-------NTANTLIPMGTKEDPFWQG 280 D + N P+ R ++ + P + A+ + + + + Sbjct: 204 Y-DYVQPEGKNGPVLTRTHRFNPLQRIADLPSPEQQYTAVNTMADLFLIVESVNAQSFFQ 262 Query: 281 SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN---LVEEKIEKTA 337 +GR++F + + + + + +K + + + +V E A Sbjct: 263 AGRSLFVASCLYAIETGKPTIGEALRIMTGGGNKK--EFYKRAAMQTANPVVAEIFLSMA 320 Query: 338 ISIRAVLTNYVKAIR------YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 + +L +YV IR +L + D+ G + L+I + Sbjct: 321 DEVDKILDSYVSVIRGAGLELWLDPAVDRATQAS--DFDFGTFRREPQS-LYIVVQPEHL 377 Query: 392 ASLKPVISMWLSIAIRGLLA--MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 +L P+I + + AI L G + V F DE L K P +++ + R +GG Sbjct: 378 KTLAPLIRLLFADAIACLQRAHPGPDEPHPVMFLMDEFDQLGKQPLVLQSIKTIRSYGGR 437 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 QS LE IYGE +L + + + A+ + +G++ + + Sbjct: 438 LFIISQSIPGLEGIYGETDRRALQAGAGVQIYMTPQDDRTADVLSAALGKRTIVGKTRSQ 497 Query: 510 SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 + + + + + E + LVS +++ P V G YP ++Y Sbjct: 498 AT-VRKLSESANISRRSEERALVSPAELLRFPLDKVLVLPEGQYPIKADHIRYY----AD 552 Query: 570 PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVT-QAEQPQQPVSP 628 F D +A P + +T + +P P + Sbjct: 553 RHFEEID----------------KARQGHALPYPPAAAPVSNRPKKITLEKPEPAAPAAI 596 Query: 629 AINDKKSDSGVNVPAGGIE---QELKMKPEE 656 ++ DK+ ++ + G ++ + + KP++ Sbjct: 597 SMGDKEFETAIQTYTGALQGYAEAARAKPKK 627 >UniRef50_B4SNC9 TRAG family protein n=17 Tax=Proteobacteria RepID=B4SNC9_STRM5 Length = 559 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 84/512 (16%), Positives = 168/512 (32%), Gaps = 62/512 (12%) Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 +Y + + FV A + +V + G + + G Sbjct: 46 YQYFNALGQPQVAPFVGKIKWAGYLGFGLPLLVLLVTGLVLLLKKDKRSLHGDARFATSA 105 Query: 158 DVAR--MLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRG 213 D+++ M KK G+ + ++R Q L +GK VI L Y G Sbjct: 106 DLSKHGMFKKTGQSIVVGSHGGKLVRLDGQQFVILAAPTRSGKGVGVVIPNLLEY----G 161 Query: 214 DMVVIYDRS---GEFVKSYYDPSIDKI--LNPL--DARCAAWDLWKECLTQPDFD----- 261 + +V+ D + + +I NP D R W+ P F Sbjct: 162 ESLVVLDIKQENFDLTSGWRASQGQEIYLFNPFAEDRRTHRWNPLSYVSDDPAFRVSDLM 221 Query: 262 NTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND----------PNRSYSKL--VDTLL 309 + A L P G ++ FW R F + + L V L Sbjct: 222 SIAAMLYPDGAEDQKFWVSQARNAFMAFTLYLFENWDDERSSGFPGGSGTPTLGAVYRLS 281 Query: 310 SIKIEKLRTYLRN-SPAANLVEE----------KIEKTAISIRAVLTNYVKA-IRYLQGI 357 S L+ YL+ S + L + ++T SI + A I + Sbjct: 282 SGDGSDLKKYLKALSERSFLSSNARSAFANMLSQADETFASILGTFKEPLNAWINPVLDK 341 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMG 413 + F + D +K ++I + A + +I+++ S I + L Sbjct: 342 ATSSNDFLLTD------VRKKKMTIYIGIQPNKLAESRLIINLFFSQLINLNTKELPKSN 395 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 + + DE ++ K+ + + + + IQS +QL+ YG + + ++ Sbjct: 396 PDLKYQCLLLMDEFTSIGKVEIIASAVSYMAGYNIRLLPIIQSMSQLDATYGREVSRTII 455 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 + + + A + +G K + ++ + ER+ L+ Sbjct: 456 TNHALQILYAPREQQDANDYSDMLGYTTIRKKNVTHAREK-------THSFTEERRALML 508 Query: 534 YSDIQSL-PDLTCYVTLPGPYPAVKLSLKYQT 564 +++++ PD ++ P+P ++Y Sbjct: 509 PQELKAMGPDKEVFLYEGIPHPVKCDKIRYYK 540 >UniRef50_D1PJ06 TraG family protein n=41 Tax=Bacteria RepID=D1PJ06_9FIRM Length = 609 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 79/472 (16%), Positives = 160/472 (33%), Gaps = 66/472 (13%) Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV------------- 226 + + +N + G G+GK+ L Q V+ D G + Sbjct: 136 PKTARNKNVLVIGGSGSGKTR--FWLKPNLMQMHSSYVVTDPKGTILVECGKMLQRGAPK 193 Query: 227 -------------KSYYDPSIDKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGT 272 K Y+P K+LN ++ R ++ + ++ D TLI Sbjct: 194 LGKDGKPMKDKHGKVIYEPYRIKVLNTINFRKSMHYNPFAYIHSEKDILKLVTTLIANTK 253 Query: 273 KE----DPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIKIEKLRTYLRNSPA 325 E D FW + ++ + + +++S L++ + ++++ + +N Sbjct: 254 GEGKAGDDFWVKAETLLYCALIGYIHYEAPVEEQNFSTLIEFINAMEVREDDEEFKNPVD 313 Query: 326 ANLVEEKIEK---------------TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM 370 + EK + +++L + + E T D + Sbjct: 314 LMFDALESEKPNHFAVRQYKKYKLAAGKTAKSILISCGARLAVFDIAEL--REVTAYDEL 371 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN-RNRR----VWFFCD 425 + LF+ +DT S +ISM + L ++ R V D Sbjct: 372 ELDTLGDRKTALFL-IMSDTDDSFNFLISMCYTQLFNLLCEKADDVYGGRLPVHVRCLID 430 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E + ++P L +++ R +Q+ +QL+ IY + A ++ M+T F Sbjct: 431 ECANIGQIPKLEKLVATIRSREISACLVLQAQSQLKAIY-KDNADTIIGNMDTSIFLGGK 489 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + A +G++ + S G + S + L+S ++ + C Sbjct: 490 EPTTLKELAAVLGKETIDTYNTGESRGRE---TSHSLNYQKLGKELMSQDELAVMDGGKC 546 Query: 546 YVTLPGPYPAVKLSLKYQTRP--KVAPEFIPRDINPEMENRLSAVLAAREAE 595 + L G P + P K + R+ ++E LSA L + E Sbjct: 547 ILQLRGVRPFLSDKYDITRHPNFKYTADADKRN-TFDIEAFLSARLKLKPDE 597 >UniRef50_C9M9B4 Conjugal transfer protein TraG n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9B4_9BACT Length = 652 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 81/506 (16%), Positives = 158/506 (31%), Gaps = 86/506 (16%) Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKI 237 R + ++ +GK + + V+ D GE + + + Sbjct: 159 RHNGKEHIIAFAPTRSGKGVGL--VIPTLVGWDQSAVVLDIKGENWALTSGWRKQNGQYV 216 Query: 238 L--NPLD---ARCAAWDLWKECLTQ-----PDFDNTANTLI-PMGTKEDPFWQGSGRTIF 286 + +P D R ++ + + D N A L+ P G FW + Sbjct: 217 MRWDPTDTVEGRSVRYNPLEAIRIRTKDEVADVQNVATLLVDPNGEGIKTFWDIEACNLL 276 Query: 287 AEAAY---LMRNDPNR--SYSKLVDTLLSI----------------KIEKLRTY------ 319 A M R + +++ L + + + Y Sbjct: 277 TGAILHVLYMARSEGRVGTLGEVLQALTTTGCTDAASIVNPWLSFKHLSENDEYKFINAQ 336 Query: 320 ----------LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG-EPFTIRD 368 + + AA + E TA SI T+ + + +++ F I D Sbjct: 337 GEEIPDRTHPVVKTVAAGIFAAPAE-TAGSILKTATSKLDLYKDPTVVKNTAHSDFKIED 395 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL--------AMGENRNRRV 420 M + K L+I N L+P+I ++LS + L+ +M ++ Sbjct: 396 LM----DANKPVSLYIVLNPKELGRLRPLIRIFLSQLLFTLMPEMKFKDGSMKPPFKHKL 451 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 DE P+L L + L + Q QL YG++ ++ + Sbjct: 452 LLLLDEFPSLGNLGIFEQALAYMGGWNIKCYLICQDTDQLSKAYGKE--ETITSNCHVTI 509 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV--RDGVSTGKDMERQTLVSYSDIQ 538 + AE+ + G + +E SY + + VS ++ +++ ++ Sbjct: 510 AYAPNKVPTAEYLSKRTGVMTVVGTNESVSYSGSGLFSKKSVSKSIQETQRPVMTVDEVM 569 Query: 539 SLP----DLTCYV------TLPGPYPAV--KLSLKYQTRPKVAPEFIPRDINPEMENRLS 586 +LP D V +P V K L ++ IP P ++L Sbjct: 570 TLPGALKDGENIVSPGDMLIFAAGFPPVYGKQILFFRDSYMSDATKIP---APSQSDKLK 626 Query: 587 AVLAAREAEGRQMASLFEPDVPEVVS 612 +E + + A + E S Sbjct: 627 TEPDGKEEKNKTQAKPEKETSSEEKS 652 >UniRef50_B4W828 TraG/TraD family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W828_9CAUL Length = 512 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 76/467 (16%), Positives = 157/467 (33%), Gaps = 53/467 (11%) Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF--VKSYYDP--SI 234 ++ +++ + G +GK + V+ +D GE + + + S Sbjct: 9 MLATVDLRPTLVTGGTRSGKGRG--HVVPTLLSWTGSVLTHDPKGELFALSAGWRATFSH 66 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLI-----PMGTKEDP-FWQGSGRTIFAE 288 +NP + A W+ E P L+ P G ++D W + I Sbjct: 67 ALSINPRNPASARWNPLAEISPGPGELAQVQRLVAILSDPGGARDDEAIWDKAASEILEA 126 Query: 289 AAY---LMRNDPNRSYSKLVDTLLSIKI-----------------EKLRTYLRNSPAANL 328 +D +++ K+ + L + + +++ + Sbjct: 127 VILHILYTADDADKTLLKVRELLADLDDVADVMVKTLHRPGPNGEPETHPFIK-TAVKGY 185 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDW-MRGVREDQKNGWLFISSN 387 ++ S++ +Y+K + E + D+ M + + L++ Sbjct: 186 AAMH-DRFRTSVQGTARSYLKWLA----GEDVERCLSASDFRMGDLMCAKAPVSLYVQVA 240 Query: 388 ADTHASLKPVISMWLSIAIRGLLA------MGENRNRRVWFFCDELPTLHKLPDLVEILP 441 A+L+P++ + A + L A G ++ ++ DE P L +L + L Sbjct: 241 PADAAALRPLVRLLFYAAAQSLTAHEKTDATGRPKHHKLLMLMDEFPLLGRLAFFEKSLR 300 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 +G +F QS + + YG ++ D + F + + + G Sbjct: 301 LMSGYGIKTMFVAQSLNDIVETYGPH--NTILDNCHVYTAFAALDPLTQDKVSKLTGTVT 358 Query: 502 HLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 + S G R VS + + L+ +I++LPD V + G P LK Sbjct: 359 ETRTSRSGPAGLGAGRSSVSRSEV--ERPLMEPGEIRALPDDDQLVFVAGFKPLRTKKLK 416 Query: 562 YQTR-PKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV 607 Y R P + +P P+ R+ A + A P+ Sbjct: 417 YDRREPFRSRAKLP---PPDQVARIDTPGRAPHPWAGRRALGENPEA 460 >UniRef50_C4GHF7 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHF7_9NEIS Length = 780 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 91/627 (14%), Positives = 186/627 (29%), Gaps = 153/627 (24%) Query: 86 KTFRMNAAQVLHDKYMIWCSEQ---LWSAFVLAAVVALVICL-ITFFVVSWILGRQGKQQ 141 + + A+ + +Y + + +AF+ + +A +I L ++ + Sbjct: 36 QALKTPASLGVLPRYFAHTHQMSPTMHTAFIASCALAGIITLAPALMILVATFMKP---- 91 Query: 142 SENEVTGGRQLTDNPKDVARML-----------KKDGKDSD------IRIGDLP--IIRD 182 + E+ G + + + L K++ K +D + +G ++R Sbjct: 92 -KRELHGSARFANRAEIFQAGLLNKPKIGKPADKRNQKQTDQAEYPALLLGKYKGQLLRW 150 Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPS--IDKI 237 + + AGK I + D +V+YD E + + + Sbjct: 151 MDNGFVLVAARTRAGKGVSI--IVPNCLNYRDSMVVYDPKFENFLLTAGFRAQAGQKVFL 208 Query: 238 LNP-----------LDAR----------------------------CAAWDLWKECLTQP 258 NP + R W+ + P Sbjct: 209 FNPGGLMPGISKAAFEERDEHGNIVSDADHVAQLAQQAEKLSQNICSHRWNPFTYISRNP 268 Query: 259 -----DFDNTANTLIPM---GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLS 310 D N A + PM G + FW S R +F + M ++ D Sbjct: 269 LFTYRDLSNMAAIMYPMDGGGKNGNAFWIESARKLFVGLSLYMIETEAERPTRDADYKQR 328 Query: 311 IKI-----------------------------EKLRTYLRN------SPAANL------- 328 + L+ +L++ A L Sbjct: 329 SSLGYLYRLATQTHSVSHSSNQQESDSNEETSNNLQAWLKSELDYRAQSEAPLSDACHTL 388 Query: 329 ---VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFIS 385 KT I + T + ++ E T D R + +++ Sbjct: 389 LADFANGNAKTNADIISTFTQPLGIF-----LDPIVEAVTSDDDFRLDDIRRCRMTVYLG 443 Query: 386 SNADTHASLKPVISMWLSIAIRGLL--AMGENRNRR----------VWFFCDELPTLHKL 433 + + +++ S I + + EN DE L + Sbjct: 444 IKPTETGTFARLTNLFFSQLINVNVEQGLPENNLNPATGKTTLPHQCLLLMDEFTALGNV 503 Query: 434 PDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFA 493 P +++ + +G + +QS AQ+E +YG + A + F R F A+ Sbjct: 504 PAIMDGVSYVAGYGLRLMIIVQSPAQIEAVYGRENARTFFTNFACRVMFTPRDQTEAKEY 563 Query: 494 AGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY 553 + +G + S+ S G S +++ L+ ++I+ +P C + + Sbjct: 564 SEILGNETVKAKSKSRSTGRG---TSHSQSISEQKRALMYDTEIKQMPMDKCILDMAAMP 620 Query: 554 PAVKLSLKY------QTRPKVAPEFIP 574 P ++Y + R K+ P IP Sbjct: 621 PIYADKIRYYDDPLFKERAKIPPPTIP 647 >UniRef50_D1PK86 TraG family protein n=8 Tax=Firmicutes RepID=D1PK86_9FIRM Length = 609 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 75/471 (15%), Positives = 157/471 (33%), Gaps = 68/471 (14%) Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV------------- 226 + + +N + G G+GK+ L Q V+ D G + Sbjct: 135 PKYARNKNVLVIGGSGSGKTR--FWLKPNLMQMHSSYVVTDPKGTILVECGKMLQRGAPK 192 Query: 227 -------------KSYYDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTANTLIPMGT 272 K Y+P K+LN ++ + ++ + ++ D TLI Sbjct: 193 LGKDGKPVKDKNGKVIYEPYQIKVLNTINFKKSMHYNPFSYIHSEKDILKLVTTLIANTK 252 Query: 273 KE----DPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIKI------------ 313 E D FW + ++ + + +++S L++ + S+++ Sbjct: 253 GEGKAGDDFWVKAETLLYCALIGYIHYEAPVEEQNFSTLIEMINSMEVREDDEEFKNAVD 312 Query: 314 ---EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM 370 ++L+ N A + + +++L + + E T D + Sbjct: 313 LMFDELKEREPNHFAVRQYAKYKLAAGKTAKSILVSCGARLAVFDIAEL--REVTAYDEL 370 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN-RNRR----VWFFCD 425 + LF+ +DT S +ISM + L ++ R V D Sbjct: 371 ELDTLGDRRTALFL-IMSDTDDSFNFLISMCYTQLFNLLCEKADDVYGGRLPVHVRCLID 429 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E + ++P L +++ R +Q+ +QL+ IY + A ++ M++ F Sbjct: 430 ECANIGQIPKLEKLVATIRSREISACLVLQAQSQLKAIY-KDNADTIIGNMDSSIFLGGK 488 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + A +G++ + S G + S + L+S ++ + C Sbjct: 489 EPTTLKELAAVLGKETIDTYNTGESRGRE---TSHSLNYQKLGKELMSQDELAVMDGGKC 545 Query: 546 YVTLPGPYPAVKLSLKYQTRP--KVAPEFIPRD---INPEMENRLSAVLAA 591 + L G P + P K + P++ I + RL Sbjct: 546 ILQLRGVRPFLSDKYDITQHPNYKYTADADPKNAFSIEDFLRARLKLKPNQ 596 >UniRef50_B6JL32 VirD4 coupling protein n=6 Tax=Helicobacter pylori RepID=B6JL32_HELP2 Length = 575 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 103/256 (40%), Gaps = 11/256 (4%) Query: 316 LRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRE 375 L +RN AN + +K SI++V + +++ Q ++ +R Sbjct: 314 LDPIIRN--EANKWAKANDKEFASIKSVYSRFMQVFTSYQVKSATD---SMSFEYEDLRA 368 Query: 376 DQKNGWLFISSNADTHASLKPVISMWL-SIAIRGLLAMGENRNRRVWFFCDELPTLHKLP 434 D N L+I +L P+I + L SIA LL + RV+ F DE KLP Sbjct: 369 D--NISLYIKIAQTDIDTLAPLIRILLESIAKNLLLKESKKFEERVYLFLDEFVRFGKLP 426 Query: 435 DLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAA 494 L+E+ +R +G +F Q A +E YG + A + + + F+ + A+ + Sbjct: 427 FLLEMPALSRSYGVVLIFITQPNALIEKYYGREDARIVNSTVAYKIIFKMDDLEYAKQVS 486 Query: 495 GEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP 554 E+G+ S G S GK E L+S DI ++ V + G + Sbjct: 487 EEVGKMTRKTRSHSTEKGQLITGGTSSIGK--EAWDLLSAQDIMNIDKDEVIVLVSG-HK 543 Query: 555 AVKLSLKYQTRPKVAP 570 A L LK K Sbjct: 544 AKPLKLKANYYFKNKE 559 >UniRef50_B2T050 TRAG family protein n=12 Tax=Burkholderia RepID=B2T050_BURPP Length = 594 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 86/534 (16%), Positives = 156/534 (29%), Gaps = 65/534 (12%) Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDP-SIDK-ILNPL- 241 L +GK I + D VV+ D E + D + NP Sbjct: 34 VLLAAPARSGKGVGI--VVPNLLSYPDSVVVLDIKQENFHLTAGFRRAHGHDVYLFNPFA 91 Query: 242 -DARCAAWDLWKECL----TQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM--R 294 D R ++ D L P+G D FW+ R +F L+ Sbjct: 92 EDGRTHRYNPLSAISGGVFRVGDILAIGYALYPVG-GHDDFWKDQARNLFLGIVLLLCEW 150 Query: 295 NDPNRSYSKL---------------------VDTLLSIKIEKLRTYLRNS--PAANLVEE 331 D R+ + V L + + R L + A N Sbjct: 151 RDARRAGNTDAPDCPVTMGEVLRQSSGNGMPVKAYLQQALLQNRRRLSGACIDALNRFLA 210 Query: 332 KIEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 +K SI A + + + F +RD R + +++ D Sbjct: 211 NDDKVLASILATFNAPLTIFANPIVDAATSANDFDLRDVRR------RRMSVYVGITPDH 264 Query: 391 HASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKF 446 ++++ S + + L + DE ++ K+ + + + Sbjct: 265 LTEAALLVNLLFSQLVNLNTKELPQDNPALKIQCLLLMDEFTSVGKIHIIARAVAYMAGY 324 Query: 447 GGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS 506 + +QS +QLE +YG A + + + K A + +G S Sbjct: 325 NLRLLSIVQSVSQLESVYGRADARTFVTNHAMQIIYAPREQKDANEYSEMLGTFTDRSRS 384 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 S R G S +R+ L+ +++ L + L P + + Y P Sbjct: 385 VSRSNAIFGGRGGSSESFSEQRRPLLLPQELKELGREKEIILLENTKPILAERICYWRDP 444 Query: 567 KVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE-------PDVPEVVSGEDVTQA 619 P M+ R Q + E P+ EV+ D + Sbjct: 445 VFTSRLAAAPAIPAMDLVRFTAQVERRLRDLQPDDMDEAGVLHVSPEYLEVLQTWDPREL 504 Query: 620 EQPQQPVSPAINDKK-SDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEV 672 + +ND ++ V I + K ++L P + E+ Sbjct: 505 PR-------HLNDISDEEAAAYVERHFILLGVPAKGVAVAARRLSPSDLDVAEL 551 >UniRef50_Q14QB8 Hypothetical trag transmembrane protein n=4 Tax=Spiroplasma citri RepID=Q14QB8_SPICI Length = 600 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 71/556 (12%), Positives = 189/556 (33%), Gaps = 105/556 (18%) Query: 94 QVLHDKYMIWCSEQLWSAFV---LAAVVALVICLITFFVVSWIL------GRQGKQQSEN 144 + ++ + W+ + ++ + + L + + + ++ ++ + Sbjct: 44 TIFINEIKQFQILSWWNYIIKNEYGLLITVGLSLALYCWFFYFVLFSKVKSKETAIKTTD 103 Query: 145 EVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQ----------NFCLHGTV 194 ++ G + K++ + +K + + + + + + G+ Sbjct: 104 KIDFGDSKWLSVKEIDDISEKINIKDNYKNTGFVFNCNKNKKDLLFNLKNNIHSVIVGST 163 Query: 195 GAGKSEVIRRLANYARQRGD-----MVVIYDRSGEFVK--SYYDPSIDKILNPLDARCA- 246 +GK++ I G ++I D GE S + + +D R Sbjct: 164 ASGKTQGIA--LPTIYLNGKSTAKPTMIITDPKGELYNLTSGFLAENSYKIKVIDFRNLE 221 Query: 247 ---AWDLWKECLTQ--------------------PDFDNTANTLIPMGTKEDPFWQGSGR 283 W+ K D ++ + ++ ED FW S Sbjct: 222 KENTWNPLKLIYDDFIKMIMTNNKKEKMRWKIKYQDKISSLSHMLIDKNIEDEFWNNSAS 281 Query: 284 TIFAEAAYLMRND-----PNRSYSKLVDTLLSIKI-----------------EKLRTYLR 321 I + D + + ++ +L ++ + L +L Sbjct: 282 IIIQGIILAILEDYEDKISKNNLTTEIEEILKKELFFNKFNMAFVAAIASIKKVLVEWLN 341 Query: 322 N---------SPAANLVEEKIEKTAISIRAVLTNYVKAIR--YLQGIEHNGEPFTIRDWM 370 N + + LV+ K +T +I + ++ +++ + + D++ Sbjct: 342 NRKNTSIAKITASQVLVDSKENRTLDAILMTVAKSLEIFNNDFIRNLTSQNDI-NCNDFI 400 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM-----GENRNRRVWFFCD 425 + + L+I +D + + +I++ +S + L + + V+F D Sbjct: 401 ------EYSTVLYI-IFSDENDNYYKLIAILISQIYQFLTNKASEIIEQKLEKPVYFILD 453 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E L K+ ++ + + +R + F +Q QL+ YG+ A + + F + Sbjct: 454 EFANLTKINNIEKWVSISRSRNIFFQFILQDINQLKLNYGDTIAKIILNNCGMHIFLHTN 513 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + ++ + G K + S + + +S K+++ L+ S++ +L Sbjct: 514 DLETIKYYSELFGTKTIEQISINEN------KSNISVSKNLKSHPLMLTSELANLKQGQG 567 Query: 546 YVTLPGPYPAVKLSLK 561 V + Y ++K++LK Sbjct: 568 IVKIA-RYNSMKITLK 582 >UniRef50_Q6LGU8 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LGU8_PHOPR Length = 620 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 81/563 (14%), Positives = 171/563 (30%), Gaps = 99/563 (17%) Query: 100 YMIWC--SEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 +M+W Q F +V L + LI ++ +++ K + N+ + G + Sbjct: 57 WMLWSIKFTQFKLYFREVWLVHLAL-LIGGTLIFYLVTLTRKVATGNKTSQGTARWATRE 115 Query: 158 DVARMLKKDGKDSDI-----RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 D+ + +G+ + + L +R + ++ + G+GK + Sbjct: 116 DIKQAGLLNGRGVYVGAFESKKNTLEYLRHNTNEHVLCYAPTGSGKGVSF--VLPTLLSW 173 Query: 213 GDMVVIYDRSGEFVK------SYYDPSIDKILNPLDARCAAWDLWKECLTQ--------- 257 +V+ D E + S + +I +P ++ +E T Sbjct: 174 PASMVVLDNKPELYEETAGWRSQHANNICLKFDPARRDSVKFNPLEEIRTNDYDASGRCT 233 Query: 258 ------PDFDNTANTLIPMGTKE--DPFWQGSGRTIFAEAAYLMRNDPNRS-------YS 302 D N A + K+ D F + + I A + + + + Sbjct: 234 LGDFEVSDTQNIATVITNPNGKDELDHFNKNAYALIVALILHTLYVEKQKGAVTSLSKVG 293 Query: 303 KLVDTLLSIKIEKLRTYLRNSPAANLVEE------------------------------- 331 ++ ++ I + + + +P L E Sbjct: 294 DILKDPNTLDIYAMLSIMMTTPHMQLNSEQPIFAFGKADAESLQHCTKTDTHPIVLQTAA 353 Query: 332 ----KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDW-MRGVREDQKNGWLFISS 386 K EK SI + + E+ D+ +R++ + LFI Sbjct: 354 EMFKKPEKELGSIISTASEKFNLFLDPIVAENTSR----SDFHYDDLRDNIQPVSLFIQV 409 Query: 387 NADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKF 446 + ++P++ + L++ ++ R+ DE + KL L L R + Sbjct: 410 RDNDQERMRPLVRLILTLILKRTTEHKNPHKHRLLLLLDEFTGIGKLKALETSLHFLRGY 469 Query: 447 GGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS 506 G IQ QL YG ++ + A+ + G ++ + Sbjct: 470 GVKVYIIIQDNVQLYQTYGRD--ETITSGCEVTIALAPNKSETAQLLSTMTGIGTVVQET 527 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD-------------LTCYVTLPGPY 553 S +S G + + L++ + LP + + G + Sbjct: 528 LTTSGKKLSQGQNISRGIVEKSRPLLTVDECLRLPPAVKDESGTRIISAGKMLIFVRGYH 587 Query: 554 PAVKLSLKYQTRPKVAPEFIPRD 576 P + Y P FI R Sbjct: 588 PILGTQSLYFKDPI----FIARH 606 >UniRef50_Q2XV30 TraG/TraD family n=6 Tax=Staphylococcus aureus RepID=Q2XV30_STAAU Length = 548 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 78/533 (14%), Positives = 164/533 (30%), Gaps = 76/533 (14%) Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDAR 244 +N + G G+ KS + N + +V+ D SGE + + K + D R Sbjct: 31 NRNIFVVGGPGSYKSAG-YVIPNVIVKNQQSIVVTDPSGEVYEKTAN---IKRMQGFDVR 86 Query: 245 CAAW---------DLWKECLTQPDFDNTANTLIPMGTK---EDPFWQGSGRTIFAEAAYL 292 + + + D A +I W + + Sbjct: 87 VVNFKNFLASDRQNFFDYIDKDSDCSIVAELIIKSAGDSKINKDVWYKASVGLLNSLLLY 146 Query: 293 MR---NDPNRSYSKLVDTLLSIKIE-------KLRTYLRNSPAANLVEEKIE-------- 334 R R+ ++ + + K +L P + E E Sbjct: 147 ARYEFEPEKRTMGNIIKFIQNNKPNQDDEGSVELDNRFNELPKDHPARESYEFGFAVSEG 206 Query: 335 KTAISIRAVLTNYVKAIRYLQGIE----HNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 +T SI + +V +R E + F +RD + +++ Sbjct: 207 RTRASI---ILTFVADLRNYLDNEIRSYTSDSDFDLRD------VGLRKTIIYVML-PVL 256 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRR----VWFFCDELPTLHKLPDLVEILPEARKF 446 +++ + S++ S + L +G+ R V F DE P + +PD E L RK+ Sbjct: 257 GNTVQSLSSLFFSQMFQQLYRLGDENGARLPVPVDFLLDEWPNIGAIPDYEETLATCRKY 316 Query: 447 GGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS 506 G +QS +Q D Y + A ++ + ++ A++ E+G + Sbjct: 317 GISITTIVQSISQAVDKYNKDKANAIIGNHAVILCLGNVNNDTAKYIKEELGNATVEFET 376 Query: 507 EQYSYGADPVRDGVSTGKDM--ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 + S+ K++ + L++ +I ++ + P + L Y Sbjct: 377 SSEGSSSGKDSRSKSSNKNVSYTGRALLNEDEISNMQQDKAILITKNRNPKIIKKLAYFK 436 Query: 565 R-PKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSG---------- 613 P + +I N + +++ + E + + Sbjct: 437 MFPNLTETYI-APQNEYKRKKNQSMIDKHNRLREEWDKKQERIKQQKLEEYKEEQRQKEL 495 Query: 614 ----------EDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEE 656 ++ E + P + K +N ++LK K + Sbjct: 496 EEEQQPQEEQQNKKVKESKDKNNEPQEDKKDEQQKINESKKAFYEKLKQKQAK 548 >UniRef50_C8S1Z9 TRAG family protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Z9_9RHOB Length = 662 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 79/504 (15%), Positives = 164/504 (32%), Gaps = 43/504 (8%) Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF---VKSYYDPSID--KILNPL 241 + + AGK + +V+ D GE + D +P Sbjct: 136 HCLVVAPTRAGKGVG--YVIPNTLLFNGSIVVLDVKGEIFEATSRHRQAEGDAVYRFSPF 193 Query: 242 DAR--CAAWDLWKECLTQPDFDN-------TANTLIPMGTKEDP-FWQGSGRTIFAEAAY 291 D ++ + +F+ ++ + + K + GR +F A Sbjct: 194 DFEHPTHRYNPLERVARIENFEQRYTELAKISDYFLTVSDKGTAGDFLAEGRELFVAAGL 253 Query: 292 LMRNDPNRSYSKLVDTLL-SIKIEKL----RTYLRNSPAANLVEE---KIEKTAISIRAV 343 L + ++ L +++ +++ AA + ++T S +V Sbjct: 254 LAIERGKPTIGEISRILFGRGATQEVYGEHAKEVKHPNAAQTFRKFAGYSDRTLSSHASV 313 Query: 344 LTNYVKAIRYLQGIEH--NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 L + ++ +G F+ D ++ +++ NAD +L P++ ++ Sbjct: 314 LGGAGMTLWNNPAVDRATSGNDFSFADL------RKRPMSIYVVVNADDIRTLSPLVRLF 367 Query: 402 LSIAIRGLLAMGENRNRRVW---FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 I + + + W DE L +P + + L + G QS Sbjct: 368 FGELIATMRSTLPDPKSEPWPVMVMLDEFDQLGPMPIVEQALKQLAGHGARVSIITQSIP 427 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRD 518 L++IYGE SL + + + K A + +G+ L S+ S D ++ Sbjct: 428 GLDNIYGENVRLSLESAAGMKLYLAANDKKTAGEISDALGKTTKLSVSDSVSRDRDFMQR 487 Query: 519 GVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI----P 574 S + ME + L++ +++ L + P + + Y P F P Sbjct: 488 -RSVSRRMEERPLLTPDEVRRLNPDQAILIPERQNPLLVHRIVYFQDPTFKKLFEAQKGP 546 Query: 575 RDINPEMENRLSAVLAAREAEGRQMASLFEPD--VPEVVSGEDVTQAEQPQQPVSPAIND 632 P+ + + EA R++A D PE V E +AE A ++ Sbjct: 547 LPFPPKEAADVQVLTQRMEALERRLAERMVVDFVRPEKVKAEAPVEAEPKLAAEIVARDE 606 Query: 633 KKSDSGVNVPAGGIEQELKMKPEE 656 + + + Sbjct: 607 IGPEREATALNSDVLVPVSQPQAT 630 >UniRef50_A3SLA3 TRAG protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SLA3_9RHOB Length = 647 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 79/414 (19%), Positives = 154/414 (37%), Gaps = 50/414 (12%) Query: 197 GKSEVIRRLANYARQRGDMVVIYDRSGEF------VKSYYDPSIDKI-LNPLDARC-AAW 248 GK+ L G ++ D G+ + Y D I +NP + + W Sbjct: 129 GKTTSFI-LPALCHDFGASCIVADMKGDLAAQSADHRKSY-LGQDVIEVNPANQFGRSNW 186 Query: 249 --DLWK---ECLTQPDFDNTANTLI--------PMGTKEDPFWQGSGR--TIFAEAAYLM 293 + + + D + P G DPFW R +F A + Sbjct: 187 AYNPMQIVLDAYAYAPQDTISEARSMALQLHAPPPGGDRDPFWPNGTRKKLVFTVVAQCV 246 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR- 352 D + + V +LS + L ++ A++++ ++ A +I++V K Sbjct: 247 LRDAHDANIPRVYEVLSDDV-LFGELLDDAIASDVLGGELAAMARNIKSVWEENPKHFES 305 Query: 353 YLQGIEHNGEPF--TIR--------DWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 + +G + PF + R D+ R ++ L++ + P + + + Sbjct: 306 FREGALQSLAPFGPSGRLAPSMETCDF-RFSDLKKRKTTLYLICDYSRMDVFAPWLGLVI 364 Query: 403 SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 A+R L+ EN + V+F DE ++L L L +G +Q ++ Sbjct: 365 WAALRELVR--ENNDTPVYFLLDEFTN-YRLSGLPNALTALGSYGIRCWMLVQELDEISR 421 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 YG +A +++ + + FF S + A+ + +GE+E +SE + G V S Sbjct: 422 AYGREALSTILSQTDVKQFFGVASDQTAQLVSRMLGEEEL--SSESFGLG-HDVLGIPSL 478 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL------KYQTRPKVAP 570 + L++ I+ LP+ + + PA L + Y+ + K P Sbjct: 479 NLGRRSKPLLTADQIRRLPEDEQIIFIKNMRPAKLLKVGAHEIEPYRHQLKPNP 532 >UniRef50_C3RFV3 TraG family mobilization protein n=11 Tax=Bacteroidales RepID=C3RFV3_9BACE Length = 648 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 97/592 (16%), Positives = 189/592 (31%), Gaps = 94/592 (15%) Query: 22 FSQIANIMLYCLFIFF--WILVGLVLWIKIS--WQTFVNGCIYWWCTTLEGMRDLIKSQP 77 F I L + F I+ GL ++ W+ + + + + L P Sbjct: 10 FILILLSTLIGTAVLFQWAIVTGLYAPLRNPAMWERLMEKDTLFRFLYVILIGGLAFLFP 69 Query: 78 VYEIQYYGKTFRMNAAQVLHDKYMIWCSEQL--WSAFVLAAVVALVICLITFFVVSWILG 135 V +++ K + + ++ ++ +L W + V + L+ + + + Sbjct: 70 VGKVKDENKKWVYTSMTLVSASMLVIGFSRLSAWYNLFVFPTVFVAYTLLVIKTLPYFIR 129 Query: 136 RQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI--GDLPIIRDSEIQNFCLHGT 193 R QS++ + G L ++ R P++ QN + G Sbjct: 130 RH--AQSDDSIFG--------------LSREESAFYFRFETASGPLVIHKPQQNVYIDGG 173 Query: 194 VGAGKSEV-IRRLANYARQRGDMVVIYDRSGEFVKS------------------------ 228 G+GKSE I+ + +R +YD G+ K Sbjct: 174 PGSGKSESWIKGIIYQCAERNYAGFVYDWEGDPTKDKSPILSRIAYGSIEYFRAKGVETP 233 Query: 229 ------YYDPSIDKILNPLDARCA---AWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQ 279 + D S +N L + L+ + N + ++ FW Sbjct: 234 RFAYINFVDMSRTVRVNVLSPKYMSKGNESLFIRNIIITLMKNLEASW----KEKTDFWA 289 Query: 280 GSGRTIFAEAAYLM---RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAA-NLVEE---- 331 + AY R + ++ LS + A N+ Sbjct: 290 NNAINYVYSIAYKCFKERELGICTLPHVIALALSDSNLVFHWLSEDPEIALNMSSMLTAW 349 Query: 332 ---KIEKTAISIRA-----VLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLF 383 ++TA ++ + VL N L + ++ + + L Sbjct: 350 KLGAQQQTAGAVSSAQTPLVLLNNKYIFWVLSPLPEE-------EFSLDITNKEHPTLLC 402 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEA 443 + + ++ P IS S+ + M F DE PT+ L + + A Sbjct: 403 VGNAPTIKEAVSPAISCIGSVLMSQ---MNNPGKATSVFMVDEFPTI-LLQGIDTFIGTA 458 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 RK + +Q + Q YGEK+A L T+A+ + + K A+ +GEK Sbjct: 459 RKHNVATILAVQDFNQAVRDYGEKSANILKASCGTQAYGMTGNEKTAKDIENLLGEK--K 516 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPA 555 +A E YS+ S + ++++ ++ DI + G P Sbjct: 517 EAQESYSH---QTSGSGSVTESLQKEKVLKARDIAGQAAGHFIGKIAGGKPP 565 >UniRef50_Q5DY60 Protein VirD4 n=1 Tax=Vibrio fischeri ES114 RepID=Q5DY60_VIBF1 Length = 608 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 91/568 (16%), Positives = 184/568 (32%), Gaps = 75/568 (13%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD 166 + + V A ++ I +I ++ + E E G ++ + + Sbjct: 27 RYQKSLVTALLIGFGIAVIAPTLLFLFNTK------EKEELHGSARFATQDEIKKEGLTN 80 Query: 167 GKDSDIRIGDL--------PIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMV 216 I IG + + L +GK VI L Y + Sbjct: 81 NNGKGILIGQFNGFLGFFKTYLYFNSDSFILLIAPTRSGKGVGVVIPNLLVY----NQSM 136 Query: 217 VIYDRSGE---FVKSYYDPSID--KILNPL--DARCAAWDLWK-----ECLTQPDFDNTA 264 VI D E Y + NP + + ++ +C D Sbjct: 137 VILDLKQENFSITSKYRAKYGQQVFLFNPFTENGQTHRYNPLSYVREGDCKIG-DILTIT 195 Query: 265 NTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEK---LRTYLR 321 + P+ ++ FW +F A ++ P S + LL K L+ YL+ Sbjct: 196 ASFYPIDDLKNSFWNNQASNLFLGLALMISETP--SLPFTIGELLRQSSGKGKPLKEYLQ 253 Query: 322 N------SPAANL-------VEEKIEKTAISIRAVLTNYVKAI----RYLQGIEHNGEPF 364 ++ L + I T S+ VL ++ + L + F Sbjct: 254 GIMDDREKSSSPLSESCIDALNRFIALTDNSLSNVLASFNAPLTLWANPLFDAATSANDF 313 Query: 365 TIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMGENRNRRV 420 +R+ +K ++I D + +++++ S I + L + Sbjct: 314 DLREL------RKKKMTVYIGITPDYLEQAERILNLFFSQLININTKELPEHNPELKYQC 367 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 DE + ++ L + + +G + IQ+ +QL+ +YG++ A + + Sbjct: 368 LLVMDEFTAMGRIGILAKSVSYMAGYGLRLLTIIQAPSQLDSVYGKEEARTYKTNHAGQI 427 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 F ++ AE + IG K S + G D S +R+ ++ +I+ + Sbjct: 428 LFAPRENEDAEEYSKAIGYKTVKAKSNSKTRGELKQTDSTS----DQRRAVMLPQEIKEI 483 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 + + P ++Y P FI R E+ + L ++ + + A Sbjct: 484 GMWKEIICIENLKPIFCKKVQYFNDPV----FIDRL--KEVSSSLKSIEGIPTRDQLKNA 537 Query: 601 SLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 + E+ + E + P SP Sbjct: 538 ITNKELQIEIPTLERIDSKPTPTLFDSP 565 >UniRef50_C6BB42 TRAG family protein n=15 Tax=Alphaproteobacteria RepID=C6BB42_RHILS Length = 561 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 82/504 (16%), Positives = 160/504 (31%), Gaps = 50/504 (9%) Query: 103 WCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARM 162 + +W ++ V+ LI F I ++ G +++A + Sbjct: 69 HRGDVIWHIGDWVFMLFAVVLLIRFLSEPLITHFSTASDADTH---GTARFGGTREIAPL 125 Query: 163 LKKDGKDSDIRIGDL----PIIRDSEIQNFCLHGTVGAGKS--EVIRRLANYARQRGDMV 216 K +G + IG ++R + +GK +I L R + Sbjct: 126 TKAEG---GLLIGRANNSGRLLRYGGPAHLLTMAPTRSGKGVGTIIPNLLTADRS----I 178 Query: 217 VIYDRSGEFVKSYYDPSIDK----ILNPLD---ARCAAWDLWKE-----CLTQPDFDNTA 264 + D GE + D IL+P AA++ D A Sbjct: 179 ICIDPKGENAQIAGDARQKFGPVHILDPFGITGKPSAAFNPMNGFNPAGIDVAEDVSTLA 238 Query: 265 NTLI--PMGTKEDPFWQGSGRTIFAEAAYLM---RNDPNRSYSKLVDTLLSIKIEKLRTY 319 + L+ G D W + + A + + D R+ + L L E R Sbjct: 239 DALVFDEPGLSGDAHWNEEAKALIAGLLLHVLASQPDDRRTLTMLRHFLTLAP-EAFRAV 297 Query: 320 LRNSPAANLVEEKIEKTA--------ISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR 371 L A++ V I + A VL+ + +L + R R Sbjct: 298 LDEMQASDAVNGLIARAANRHLGKSDREASGVLSAAQRHTHFL-DSPRMTAVLS-RSDFR 355 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA---MGENRNRRVWFFCDELP 428 +F+ D A+ + + ++ ++ + + V + DE Sbjct: 356 FSDLKANKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPSPQPSAPPVLYLLDEFA 415 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 L L + + +G +Q QL YG+ A + F H Sbjct: 416 ALGHLAPIERAMGLMAGYGVQLWPIVQDIHQLRATYGQ-RAGTFLSNAGVLQVFGVNDHD 474 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVT 548 A + +G++ + + D R G+S + + L++ +++++ T + Sbjct: 475 SARLVSDLLGQETVVFNTAAR--ALDSERTGLSFAEQHVGRPLLTPDEVRNMHAETELLF 532 Query: 549 LPGPYPAVKLSLKYQTRPKVAPEF 572 + G P + L+Y P+ A F Sbjct: 533 IAGQRPIAAVKLRYYADPEFAGLF 556 >UniRef50_UPI0001C37912 TRAG family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37912 Length = 689 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 96/649 (14%), Positives = 198/649 (30%), Gaps = 124/649 (19%) Query: 99 KYMIWCSEQLWSAFVLAAVVALVICLITFFV--VSWILGRQGKQQSENEVTGGRQLTDNP 156 +M F L+ L V + + + K++ G + + Sbjct: 46 PFMSNLGVAFARIFPSLHPFDLLFGLGLAGVMRLVLYVKSKNKKKFRQGEEYGSAVWGSE 105 Query: 157 KDVARMLKKD--------GKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVI------ 202 KD+ + K + +G + + +N + G G+GK+ Sbjct: 106 KDIEPYMDLSCPENNVILTKTESLTMGKPSAPKFARNKNILVIGGSGSGKTRFFVKPNLM 165 Query: 203 --------------------RRLANYARQRGDMVVIY--DRSGEFVKSY-------YDPS 233 R L +R + V+Y D G ++K Y+P Sbjct: 166 QMHSSYVVTDPKGTVLVECGRMLERGRPKRVNGKVVYRRDDKGNYLKDKNGRYIPVYEPY 225 Query: 234 IDKILNPLD-ARCAAWDLWKECL---TQPDFDNTANTLIP-----MGTKEDPFWQGSGRT 284 K+ N +D A+ ++ + + D LI D FW + + Sbjct: 226 KIKVFNTIDFAKSMHYNPFAYISKKNREKDILKFVEVLIKNTSSSQQPSGDDFWVKAEKL 285 Query: 285 IFAE---AAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPA---------------- 325 ++ + M + ++ L+D + + + + +NS Sbjct: 286 LYTAYIALIFAMYPEDEWNFETLIDMINNSECREDDEEFKNSIDLEFEIVECWLNGTKHD 345 Query: 326 --------ANLVEEKIE----------------------KTAISIRAVLTNYVKAIRYLQ 355 A+L E K + KTA SI + + + Sbjct: 346 DPDVMEDYADLFETKPDAEQRRMGTFALKQFKAYKLAAGKTAKSILISCSTRLAPFAIDE 405 Query: 356 GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN 415 +E + + D+ + I S+ D A+ ++++ S L +N Sbjct: 406 VLEIT----SYDELHLDKLGDELSALFIIISDTD--ATFNFLVAIMYSQLFNLLCTKADN 459 Query: 416 RNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 V DE + ++P +++ R +Q+ +QL+ IY + A Sbjct: 460 SPGGKLTYHVRCLLDEFANIGEIPQFEKLIATIRSREISASIILQAKSQLKAIY-KDNAD 518 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 ++ +T F + + +G++ + + G + + Sbjct: 519 TIEGNCDTMLFLGGKEKSTLKEISESLGKETIDSFNTSTNRGQS---ESYGMNYQKLGKE 575 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEM---ENRLSA 587 L S ++ + C + L G P TR K P + D NPEM + + Sbjct: 576 LKSQDELAVMDGGKCILMLRGVRPFFSDKFDI-TRHKQYP--MLLDDNPEMGFNIEKYVS 632 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD 636 A + V +G++VT + + N +++D Sbjct: 633 DQKAMRLRLSRQEKFTGYGVDMTAAGQEVTTVSATETETADTQNSEETD 681 >UniRef50_C2HEY6 TraG/TraD family protein n=4 Tax=Enterococcus faecium RepID=C2HEY6_ENTFC Length = 634 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 71/477 (14%), Positives = 155/477 (32%), Gaps = 52/477 (10%) Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV----KSYYDPSIDK-ILN 239 +N + G G+GK+ + Q V+ D G + K + + I + Sbjct: 147 NKNIVVVGGAGSGKTR--FYVKPNLMQMHSSYVVSDSKGLLLMETGKMFEEAGYKIKIFD 204 Query: 240 PLDARCA-AWDLWKECLTQPDFDNTANTLI-----PMGTKEDPFWQGSGRTIFAEAAYLM 293 ++ + ++ +K + D N LI P D FW+ + + + Sbjct: 205 LINRKATDYYNPFKYIRNEDDILKIINNLIKNTTDPDKKGGDGFWEKAETALLMAIFSYL 264 Query: 294 RND---PNRSYSKLVDTLLSIKIEK--------LRTYLRNSPA----------ANLVEEK 332 + +R+ +++ + IE+ L + + + Sbjct: 265 IQEVVEEDRTLGSVIELVRLADIEEDVPNFVSPLDVLFQELEQKDPQNFAVAQYKIFKLS 324 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 KT SI L + I + + DQK + + DT Sbjct: 325 AGKTTKSILVSLGVRLAPF----DIPSVRQLVSKDTLALDSIGDQKTILYILLPDTDT-- 378 Query: 393 SLKPVISMWLSIAIRGLLAMGEN-RNRR----VWFFCDELPTLHKLPDLVEILPEARKFG 447 S + SM L+ +N R V DE + ++PD +++ R Sbjct: 379 SFNFLASMMYQQLFDMLVYKADNVYKGRLPVHVRCILDEFANIGQIPDFEKVISVVRSRE 438 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 +Q+ +QL+ +Y + ++ +T + E+ + +G++ + + Sbjct: 439 ISTSVILQNISQLKTLY-KNTWETIIGTSDTFLYLGGMEQSTHEYISKLLGKETIEQRNI 497 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL---KYQT 564 + GA+ + + L+ ++ SL C + + G +P + K++ Sbjct: 498 SVTKGANG---SFNESFQKLGRNLMDPDEVASLKGQECILKIRGAHPFLSSKYDITKHKN 554 Query: 565 RPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQ 621 K+ + + +L +E + L D E + D E+ Sbjct: 555 YKKLGDVTEKYMYTRDFSEQEEQLLPGQEELPYEPDELLLSDFDETLDESDDMIDEE 611 >UniRef50_Q0ACY8 TRAG family protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0ACY8_NITEC Length = 639 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 77/547 (14%), Positives = 163/547 (29%), Gaps = 101/547 (18%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 + + AF++ + V ++I ++ F +V + R ++ ++ T + ++ Sbjct: 57 FYQGAPDTYNYAFIIFS-VGVLIGMVAFVIVVGVKSRSSRKHTDVHGTAHFASIEEIQET 115 Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEI--------QNFCLHGTVGAGKSEVIRRLANYARQ 211 + K + + G + ++ C +GK + + Sbjct: 116 GLISKPGKRGQGVYCGAFDDPNGEKTYYLRHDGPEHICAIAPTRSGKGVGL--VIPTLLS 173 Query: 212 RGDMVVIYDRSGEFVKS----YYDPSIDKILNPLDA----RCAAWDLWKECLTQ-----P 258 V + DR GE + + + IL D W+ E + Sbjct: 174 WPHSVFVLDRKGENYAITAGWRREEAGNVILR-FDPAQPGESCGWNPLNEIRYKTRFQVS 232 Query: 259 DFDNTANTLIPMGTK--EDPFWQGSGRTIFAEAAYL------------------------ 292 D N A ++ K E ++ + + Sbjct: 233 DTQNIAYMVVDSDGKGIEGNHFRSAAYELLTGLILHSLYKSDGVGRFPSLSDCALMLTGV 292 Query: 293 -----------MRNDPNRSYSKL---------VDTLLSIKIEKLRTYLRNSPAANLVEEK 332 + D + L VD + +I++ + +++ Sbjct: 293 GDFAAPDTQDNLAEDADGDPKALNSLFAEMRDVDFPVKDQIDREAKLVIAGVGRRMLDTP 352 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIEHNGE-PFTIRDWMRGVREDQKNGWLFISSNADTH 391 + SI + + R E+ F+I D M + + L+ + Sbjct: 353 A-RELGSIISTANTALSLYRDPIVGENTSRSDFSISDLM----DHDRPVSLYFITTPRNA 407 Query: 392 ASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLVEILPEA 443 ++P+ + L++ + L E + R+ DE PTL +L L Sbjct: 408 DRMRPLARLLLTLIVSSLADRMEFDNGRSKTSHKHRLLLMLDEFPTLGRLEIFESALAFI 467 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 +G Q QL Y S+ + R + + AE+ + G+ + Sbjct: 468 AGYGMKAYIITQDVQQLYKAY--TNFESIISNCHVRVAYAPNKVETAEWMSKMAGQATVI 525 Query: 504 KASEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDIQSLP------------DLTCYVTLP 550 K S V + VS ++ L++ +I LP V + Sbjct: 526 KEQVNESGKRFGMVLEQVSRSFQEVQRPLMTTDEIMQLPGPKKDSKDNIVEPGEMLVFVA 585 Query: 551 GPYPAVK 557 G YP ++ Sbjct: 586 G-YPVIR 591 >UniRef50_B1BR15 ATPase involved in conjugal plasmid transfer n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BR15_CLOPE Length = 702 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 141/390 (36%), Gaps = 39/390 (10%) Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 Y+ + L D + + K N+ EK A + + L+ + Sbjct: 7 YITYEEGLEGLKALFDKIDNTHPAKQAWITFNTAT------GNEKVAAGVISGLSIKLDT 60 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 ++ I + + D +K + + DTHA+ + ++ + A L+ Sbjct: 61 LQ----IPSFRDLLSGNDIDLTAPGREKCAYFVVV--PDTHATFNFLAGLFFTFAFINLI 114 Query: 411 A----MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGE 466 +G+ V F DE P + K+PD + + R G Q+ QLE Y + Sbjct: 115 DFADKLGDALPYHVNFLLDEFPNIAKIPDFEKKISTVRSRGVSICVIFQTLLQLESRYSK 174 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE---QYSYGADPVRDGVSTG 523 + A+ + +++ F + A + + + + + YS+ D V GV+ Sbjct: 175 EVASEILGNCDSKVFLGANEIDTATYISKMLDDTTIKVKTTIKGAYSFFDDKVSTGVA-- 232 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP---KVAPEFIPRDINPE 580 ++ L ++ P YV L G P L + Y +V +I + P Sbjct: 233 ----KRELRKPGEVLKKPRTQSYVLLSGLDPIKALKMDYTKHSMGNEVKEHYIYDMLKPW 288 Query: 581 MENRLSAVLA---------AREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIN 631 L + + + + +V ++ E+ T ++ ++ ++ Sbjct: 289 SSKYHEKYLNEMCIQLRKAINKVDSAKDSDSEVKNVLNNIALENETIITNERERIAESLK 348 Query: 632 DKKSDSGVNVPAGGIEQELKMKPEEEMEQQ 661 + +++S N + +++ + E++ ++ Sbjct: 349 NIQNESLNNSSKNKL--KIRKRTEDDSTKE 376 >UniRef50_Q8E5A4 Putative uncharacterized protein gbs1128 n=3 Tax=Streptococcus RepID=Q8E5A4_STRA3 Length = 681 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 90/659 (13%), Positives = 211/659 (32%), Gaps = 81/659 (12%) Query: 72 LIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVS 131 L P ++ + ++ Y W + L +L+A+V + L+ + + Sbjct: 28 LYCMAPQADMTNLFAPYTYVFEKITEPPYFYWNTSPL---AILSALVGFFVGLLFYLKIR 84 Query: 132 W-ILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII-RDSEIQNFC 189 R G++ ++L + +R +++ + + + + +N Sbjct: 85 LDGNYRHGEESGSACFATAQELKGFQDEESRNNMIFSREAQMGLFNKRLPFERQLNKNVL 144 Query: 190 LHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS-----YYDPSIDKILNPLD-A 243 + G G GK+ + Q ++ D G V+ + KI + ++ Sbjct: 145 VAGLPGDGKTYT--YVKPNLMQMNSSFIVTDPKGLLVREVGTMLKENGYQIKIFDLVNLT 202 Query: 244 RCAAWDLWKECLTQPDFDNTANTLIPMGTKED----PFWQGSGRTI-------------- 285 ++ ++ ++ D D ++ K D FW + + Sbjct: 203 NSDMFNPFRYMRSELDIDRITEAIVEGTKKGDREGEDFWNQAKLLLNRALLGYLYFDSQV 262 Query: 286 ------FAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV----EEKIEK 335 + A L+RN + +L + + ++L L + A + Sbjct: 263 RHYEPNLSMVADLLRNLKRPNEKEL--SAVEKMFKQLEEKLPGNYACRQWELFNSNFEAE 320 Query: 336 TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 T + +++ + D M + + +F++ ++T+ + Sbjct: 321 TRTGVLSIVATQYSIFDHDAVTNLIK-----TDTMEMDTWNTEKTAVFVAI-SETNKAYS 374 Query: 396 PVISMWLSIAIRGL------LAMGENRN------RRVWFFCDELPTLHKLPDLVEILPEA 443 + S + ++ L + GE + V F+ DE K+P E+L Sbjct: 375 FLASTFFTVVFDQLTHSADAIIQGEKKGYELKDLLHVQFYFDEFANCGKIPHFNEVLASI 434 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 R IQ+ +QL+ +YG A S+ + T F + ++ + G++ + Sbjct: 435 RSREMSIKIIIQAISQLDSLYGVPARKSMVNNCATLLFLGTNDEDTMKYFSMRAGKQTII 494 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP------------G 551 + S G R +T + ++ L++ +I + V + Sbjct: 495 QTSYSEQRG---HRISGTTSRQAHQRDLMTPDEIARIGVDEALVFISKQNVFRDKKAMVS 551 Query: 552 PYPAV-KLSLKYQTRPKVA-PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPE 609 +P +L+ YQ + F+ + ++ ++ + M+ Sbjct: 552 NHPMKDRLANHYQDKTWYHYKRFME-EGAEFIDAVMTGQIPEDRIWAPDMSDYQAFLEEN 610 Query: 610 VVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISE 668 + E P N + S ++L E+ +LPP E Sbjct: 611 GFDNTRQSAPETSVHNQVPVTNPEMP-SESPSQTSETSKKLVDMDTGEI-FELPPEDRE 667 >UniRef50_A7VQG5 Putative uncharacterized protein n=12 Tax=Bacteria RepID=A7VQG5_9CLOT Length = 617 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 86/518 (16%), Positives = 177/518 (34%), Gaps = 65/518 (12%) Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 + M W+ + + ++ L ++ + R+ +++ G Q D + Sbjct: 66 SEAMNSPFSLHWTEYSVQCLL-LFTTGYGIIALTVVSNRKNRRRGTEH--GSAQWGDVFQ 122 Query: 158 DVARMLKKDGKDSDIRIG-----DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 R K ++ + L + N + G GAGKS + N Sbjct: 123 TAKRYRDKKNPKQNLILTQHFQMGLDGHKHKRNTNVLVIGGSGAGKSRS-YAIPNALNCG 181 Query: 213 GDMVVIYDRSGEFVKSY--------YDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTA 264 + + D E ++ ++ + +LNP DA ++ D Sbjct: 182 ECSMAVCDPKSEILRKTGTALKANGFEVRVFDLLNP-DA-SYCYNPLAYVRDDKDVLRLI 239 Query: 265 NTLI-----PMGTKEDPFWQGSGRTIF-AEAAYLMRNDP--NRSYSKLVDTLLSIKI-EK 315 TLI P DPFW S + A YLM P ++++ +++ L + ++ E+ Sbjct: 240 ETLIQSTTPPGAQTSDPFWTKSETALLQALVLYLMHEAPKEEQNFAMVMEMLEAAEVREE 299 Query: 316 LRTY------------LRNSPA-----ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 Y +RN + + + KT SI + + A Q Sbjct: 300 DDEYESPLDILFSRLEMRNPESIAVRQYRIFKMGAGKTLKSILISVGVRLSAFNLPQIA- 358 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR 418 T D + +K LF D+ SL ++ M I+ L + + + + Sbjct: 359 ----RLTYTDELLLEEMGEKKVALFCCI-PDSDKSLNYLVGMIFGQLIQTLYFVADRKYK 413 Query: 419 -----RVWFFCDELPTLHKLP--DLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 V DE P + LP + + L R + Q+ AQ++ ++ ++ S Sbjct: 414 GRLPVPVHLLIDEAPNI-ALPTDNFLPWLSTMRSRNIFCSYIAQNMAQIKALF-KEQWES 471 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV-STGKDMERQT 530 L + + + + ++ + +G + + +YG R G S + Sbjct: 472 LVGLCDEFLYLGGNEKETHKYVSELMG----RETLDTNTYGRSRGRSGSFSVNDQQTGRE 527 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 L++ +++ L + + + G P + P + Sbjct: 528 LLTPDEVRLLDNRKAILFVRGERPIMDDKYDLMRHPNI 565 >UniRef50_Q9PHI9 Conjugal transfer protein n=1 Tax=Xylella fastidiosa RepID=Q9PHI9_XYLFA Length = 656 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 75/494 (15%), Positives = 158/494 (31%), Gaps = 51/494 (10%) Query: 186 QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSID--KILNP 240 Q+ + +GK I + D VV D E +Y + NP Sbjct: 120 QHVSISAPTRSGKGVGI--VIPNLLSWPDSVVCSDIKIENFAITSAYRQKHGQECYLFNP 177 Query: 241 L--DARCAAWDLWKECLTQPDFD-----NTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 + + + ++ P F N L P D W + R++F ++ Sbjct: 178 VSTEYKTHRYNPLSYISEDPHFRIDDIQKIGNMLFPDVPGTDVIWTATPRSLFLGIVLML 237 Query: 294 RNDPNR--SYSKLVDTLLSIKIEKL-------RTYLRNSPAA--------NLVEEKIEKT 336 + ++ +++ L + +P + + + E T Sbjct: 238 LETQGKLVTFGQVLRETLQDGDGSVYFGKIINERAKAGNPYSGPCIRALNSYISIASENT 297 Query: 337 AISIRAVLTNYVK-AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 + + ++ + + +G F +RD +K +F+ D L Sbjct: 298 RSGVMTSFRSKLELWMNPIIDAATSGNDFDLRDL------RKKRMSVFVGVTPDNLKRLA 351 Query: 396 PVISMW----LSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 P+++++ + + R L + DE L KL L + + +G + Sbjct: 352 PLLNLFYQQLIDLNTRELPEHNPALKYQCLLMMDEFTALGKLDCLADGISFIAGYGLRLL 411 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFF--RSPSHKIAEFAAGEIGEKEHLKASEQY 509 QS AQ+ YGE AA + + + + K A + +G + SE Sbjct: 412 PIFQSPAQIVGKYGEAAAETFSTNHAAQIIYPPKVTEIKTAREISEWLGFQTVKGVSESK 471 Query: 510 SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 G + S +R+ L+ +I SL V + P + ++Y Sbjct: 472 GKGI-FTKKSESQSISDQRRALLLPQEITSLGSKRALVVVEDCPPILAKRIRYF----RE 526 Query: 570 PEFIPR--DINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 F+ R ++P + + + ++ + + VP + E + + Sbjct: 527 HVFMDRLKSVSPSLAKFGNKLPNEKQLKAIIESGELAVKVPVIDIDEHICMVSGSTVAQT 586 Query: 628 PAINDKKSDSGVNV 641 + + V+V Sbjct: 587 TVVVQSNGKTEVHV 600 >UniRef50_A7FC77 Conjugal transfer protein TraG n=7 Tax=Gammaproteobacteria RepID=A7FC77_YERP3 Length = 645 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 69/437 (15%), Positives = 140/437 (32%), Gaps = 79/437 (18%) Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV------KS 228 G L +R + ++ + +GK + + VI D GE + Sbjct: 150 GKLHYLRHNGPEHILTYAPTRSGKGVGL--VVPTLLSWPHSAVITDLKGELWAMTAGWRK 207 Query: 229 YYDPSIDKILNPLDAR-CAAWDLWKECLTQPDFD-----NTANTLI-PMGTKEDPFWQGS 281 Y + P A W+ E +++ N + ++ P G + WQ + Sbjct: 208 EYAKNKTIRFEPATLNGSARWNPLDEIRIATEYEVGDVQNLSTLIVDPDGKGLNDHWQKT 267 Query: 282 GRTIFAE----AAYLMRNDPNRSYSKLVDTLLSIKIEKLRTY----------------LR 321 + + A Y + + + +D +LS + + + Sbjct: 268 SQALIVGLILHALYKAKEEGTPATLPYIDRMLSDPNKDIAELWMEMSQYGHVNGENHPVV 327 Query: 322 NSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWMRGVREDQKNG 380 S A ++++ ++ A S+ + +Y+ R + + F I+D M Sbjct: 328 GSSARDMMDRPDDE-AGSVLSSAKSYLSLYRDPVVARNVSSSDFCIKDLMNH----DDPV 382 Query: 381 WLFISSNADTHASLKPVISMWLSIAIRGLLAMGE-------------------------- 414 L+I + + A L+P++ + ++ R L E Sbjct: 383 SLYIVTQPNDKARLRPLVRVMTNMIFRLLADKMEFERVQQKVPRWRQILAKFGFKQPALS 442 Query: 415 ------NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI---YG 465 R+ DE P+L KL L E L +G Q QL+ YG Sbjct: 443 YIRSKKTYKHRLLGMIDEFPSLGKLEILQESLAFVAGYGIKLYLICQDINQLKSRETGYG 502 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS-YGADPVRDGVSTGK 524 ++ + + + + AE + G+ +K S A + VS Sbjct: 503 PD--ETITSNCHVQNAYPPNRVETAEHLSKLTGQATVVKEQITTSGRRASAMLGQVSRTI 560 Query: 525 DMERQTLVSYSDIQSLP 541 ++ L++ + +P Sbjct: 561 QEVQRPLLTVDECLRMP 577 >UniRef50_Q6X3G3 TraG n=2 Tax=Gammaproteobacteria RepID=Q6X3G3_PSEAE Length = 840 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 70/446 (15%), Positives = 141/446 (31%), Gaps = 59/446 (13%) Query: 173 RIGDLPIIRDSEIQ---NFCLHGTVGAGKS--EVIRRLANYARQRGDMVVIYDRSGE--- 224 R+ D P D + + G+GK VI L +Y ++ D GE Sbjct: 403 RVSDAPAGLDQRFRFTGHVVTVAPTGSGKGIGAVIPNLLDYPGS----ALVLDVKGENAA 458 Query: 225 --------------FVKSYY-DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP 269 V + + N LD R W+ +C+++ A+ L+ Sbjct: 459 VTARARRALGQAVHVVDPFAVNGDGAAAFNVLD-RLDVWNP--DCVSES--ATLADCLVI 513 Query: 270 MGTK-EDPFWQGSGRTIFAEAAYL---MRNDPNRSYSKLVDTLLSIKIE--KLRTYLRNS 323 K E F+ S + + + R+ +L L + + E L + Sbjct: 514 GSEKAESKFFDESAKNLLQGLMLHVVSLDEPERRNLGELRRLLTTGEGEFFDLLGMMAAD 573 Query: 324 PAANL-----VEEKIEKTAISIRA-VLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQ 377 A I A R V++ +L + D+ + + Sbjct: 574 ETAAFGIPARAANTIMGMADKARGDVISTARTHTAFLDD-PRIAAALSRSDFDLSAIKSE 632 Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLV 437 +F+ A+ + +++ I + + RV F DE L + + Sbjct: 633 L-MTVFLVMPANRIGPNARFLRLFVGSIIAAITSSNVQPAHRVAFLLDEFGQLGYMKQIE 691 Query: 438 EILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEI 497 + + R +G + IQ +QL+ Y + + ++FF + + A++ + + Sbjct: 692 DAVSLLRGYGLAFWVFIQDLSQLKGTYPK--WQTFLANSA-KSFFGTDDYDTAKYISDSL 748 Query: 498 GEKEHLKASEQYSYGAD----------PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 G+ +E + T + + L++ ++ L V Sbjct: 749 GKATIEFETENTGKNSGSGLSGGGGSMNRGKSTGTSQQFTGRELLTPDEVMRLGPEHPIV 808 Query: 548 TLPGPYPAVKLSLKYQTRPKVAPEFI 573 + G P + L Y + A F Sbjct: 809 LVRGERPYLLDRLNYLADAEYAGLFD 834 >UniRef50_B4WW44 Putative uncharacterized protein n=2 Tax=Synechococcus sp. PCC 7335 RepID=B4WW44_9SYNE Length = 275 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 21/195 (10%) Query: 104 CSEQLWSAFVLAAVVALVIC---LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA 160 +Q + +++A + L I L F ++ ++L G+ V G+++ + ++ Sbjct: 77 TKQQRRTFYIIAGAIILFISVPPLPAFILLLFLLKPAGR------VIRGQEVV-SAAEMQ 129 Query: 161 RMLKKDGKDSD------IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGD 214 R L K K++ + IG + + D E G+ G+GK++ I+RL R R D Sbjct: 130 RQLDKRQKETPMPQLPLLEIGGVQLPNDLENLGVFAIGSPGSGKTQAIKRLLQTLRDRED 189 Query: 215 -MVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 V+++DR+GE ++S+Y+ DK+ NP DAR +W E + A ++P+ Sbjct: 190 FRVMVFDRNGELMESFYNEYTDKLFNPRDARLVSWSHLSEGQQP---ETMAVAMVPLPQN 246 Query: 274 EDP-FWQGSGRTIFA 287 ED F+ + R++ + Sbjct: 247 EDKAFFAQAARSLLS 261 >UniRef50_C8WMY2 TRAG family protein n=2 Tax=Coriobacteriaceae RepID=C8WMY2_EGGLE Length = 590 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 72/453 (15%), Positives = 143/453 (31%), Gaps = 77/453 (16%) Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP-----SIDKILN 239 +N + G G+GK+ + Q + D + + Sbjct: 137 NKNVMVVGGSGSGKTRYF--VKPNLLQMNCSYFVTDPKATLAAELREALESAGYRVVEFS 194 Query: 240 PLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGTKE-----DPFWQGSGRTIFAEAAYLM 293 +D A ++ + D LI + + DPFW+ + R ++ + Sbjct: 195 TIDMNGSAHYNPIAYVKNEADVLTFVECLIRNTSGDGEHSGDPFWEEAERLLYVALVSYL 254 Query: 294 --------RNDPN----------RSYSKLVDTLLSIKIEKLRTY---------------- 319 RN P R + + L I E+L Sbjct: 255 VFHCPEADRNVPGLLTLLGLAEAREEDEDFKSPLDIVFEELERGACFTQVGARNAFDAES 314 Query: 320 --------------LRNSPAA----NLVEEKIEKTAIS--IRAVLTNYVKAIRYLQGIEH 359 + N +A L K KTA +++++ + ++ L E Sbjct: 315 RGFDDAAGAWRWIGVANPVSAQEDFALSNYKAFKTAAGKTLKSIIISCNVRLKPLSVKEV 374 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL----SIAIRGLLAM-GE 414 + + + G D +S +DT+ + + ++ + L G Sbjct: 375 SAL-LSRDEMSLGSMGDAGQKTCVFASMSDTNPTFNFLFTLLMWQTVDALCNTALERHGG 433 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + V F DE + +LP+ + + R +QS+AQLE Y + A + D Sbjct: 434 SLPTHVHFVFDEFANIGELPNFEQTISTVRSRNISCSVIVQSFAQLEKRY-REGAEIIKD 492 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 +T F + K + + IG++ + S G + + + + L+ Sbjct: 493 NCDTTLFLGGKAVKTNKEISEAIGKETVSAMTVNDSRGQGS---STTRNRQIIERDLMQA 549 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 S++ LP V + G P + + P+ Sbjct: 550 SEVGRLPRDEAIVLIAGANPIRDKKYRLEGHPR 582 >UniRef50_B0T9Q1 TRAG family protein n=2 Tax=Caulobacter sp. K31 RepID=B0T9Q1_CAUSK Length = 658 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 94/602 (15%), Positives = 190/602 (31%), Gaps = 85/602 (14%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 + + + AF +AA++AL + ++ + + E T+ Sbjct: 58 WYGRFAARYQQAFDMAAMIALAAVFVPSMLLIGLTKSTRRAPR--EFGKDAWATEAHVRK 115 Query: 160 ARMLKKDGKDSDIRIGDL--PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVV 217 A+++ DG+ S +G + +++ + G +GK + Sbjct: 116 AKLVHGDGQISGRVLGRFNGKYLTYRGVEHAIIVGASRSGKGAG--HVVPTLIAWPQSAF 173 Query: 218 IYDRSGEF--VKSYYDPSIDKIL--NPLDARCAAWDLWKECLTQP----DFDNTANTLI- 268 +YDR GE + + + + + P D W+ E P D N L+ Sbjct: 174 VYDRKGELWHITADHRKTFSHVFYFAPTDPNTVRWNPLFEVRKGPMEIADIQNVVGILVD 233 Query: 269 PMGTKEDP--FWQGSGRTIFAEAAYLM---RNDPNRSYSKLVDTLLSIK----------- 312 P+G K FW S F + D ++ +++ L++I Sbjct: 234 PLGRKAGDLNFWDQSATDFFTAIILHVLYSEEDTKKNLAQVRRLLINIDPTLHAMKHTKH 293 Query: 313 --------------------IEKLRT--YLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 I ++ L + ++ E + RA L+ + Sbjct: 294 RHRPDLHAPGGLARGADGKPIAEVHPEILLGATALDSMDERVKSNVLATCRASLSLWADP 353 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 + F+I D + + +I + L ++ ++ I L+ Sbjct: 354 YVEYATSWSD---FSIGDLVC----SESPVTFYIITPQAHADRLAFLVRVFTRQTINSLM 406 Query: 411 ------AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY 464 + G + R+ DE P L LP L + E +G QS+ + Y Sbjct: 407 EREHFDSRGRRKAHRLLLLLDEFPKLGSLPFLENAMGEMAGYGITAHLICQSFNDVFSKY 466 Query: 465 GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV-STG 523 G+K +FD M+ A F + + G+ L+ E YS ST Sbjct: 467 GDKT--PIFDNMHITATFATSEPTSIDKVIRRAGKA--LEMRESYSDPRSIFGSSHRSTS 522 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP-----------KVAPEF 572 + + +++ ++ L D ++ + P ++Y P V ++ Sbjct: 523 QSEHERYILTEDRVRELDDDQQFLFVNNTKPIRAEKIRYYDEPFFKARTGDYFHGVPAKY 582 Query: 573 IPRDINPEMENRLSAV---LAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPA 629 R ++ + A E + + P PE + Q +P Sbjct: 583 EQRPGTADLPGPAQIDWLGVRAAEPAPAGLKGVVPPPAPEETDDGPQPAGDSGQGLHAPV 642 Query: 630 IN 631 + Sbjct: 643 SS 644 >UniRef50_A0P1U0 TRAG protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1U0_9RHOB Length = 621 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 72/511 (14%), Positives = 155/511 (30%), Gaps = 94/511 (18%) Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARM-----LKKDG--KD 169 ++ + FV +G + +E G + + AR +K+ G + Sbjct: 54 ILHPAYGGLASFVTLMFVGAIVASGARSETIFGGRKQKDIHGTARWAETRDVKESGLLSE 113 Query: 170 SDIRIGDLPIIRDSEI------QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 S + +G P+ R ++ ++ +GK + + + ++ D G Sbjct: 114 SGVVVGGWPMRRGVKMLRHDGPEHVLAFAPTRSGKGVGL--VLPTLLSWEESALVLDIKG 171 Query: 224 E---FVKSYYDPSIDKIL--NPL-DARCAAWDLWKECL-----TQPDFDNTANTLI-PMG 271 E + +I +P D ++ E D N A +I P G Sbjct: 172 ENYALTAGWRAAQGQRIFRFDPAADKGSVKYNPLAEIRFGTDHEIADCQNIAIMIIDPDG 231 Query: 272 TKEDPFWQG-----SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEK----------- 315 T FW I + +++ + V +SI ++ Sbjct: 232 TGLKDFWMQEGYGWLCTAILHVLYRIKKSENRTATLADVRAFMSIGDDEDSKSISQQAVA 291 Query: 316 ---------------------LRTYLRNSP---------------AANLVEEKIEKTAIS 339 L++ A + ++ Sbjct: 292 AAAKAAFGQKDGEPDDGEDDSFDRLLKDMERYEHGREVVNDEVRLGAARMRKRSSNERSG 351 Query: 340 IRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 + + T+ + + + F I D M G K L+I A L+P++ Sbjct: 352 VHSTGTSQLALYSDPIVARNISESDFRITDLMNG----DKPATLYIVIPPSDIARLRPLV 407 Query: 399 SMWLSIAIRGLLA--------MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 + L+ + L + ++ R+ DE ++ KL + + +G Sbjct: 408 RILLNQFLTRLTSHMAFEGGRSVKHYKHRMLLMLDEFTSVGKLEIFEKAIAFMAGYGLKA 467 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 +Q QL+ YG + S+ + R + + + A + G+ ++ S Sbjct: 468 FVIVQDLTQLQKTYGRE--QSIVSNCHVRIAYAPNTMETARVLSDMAGKTTLVQKKTSAS 525 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 + + S + L++ + SLP Sbjct: 526 HTTGKIGTNYSETLMEVARPLLTPDECMSLP 556 >UniRef50_C7GFT5 TraG family protein n=15 Tax=Bacteria RepID=C7GFT5_9FIRM Length = 730 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 82/515 (15%), Positives = 177/515 (34%), Gaps = 53/515 (10%) Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 D++ C+ + + V A+ I L + + + + + G + +NPK Sbjct: 42 DRFNEVCAVPFANYYNSNTVKAVAIALGIYAMAIVMYYTSQRNYMPGKEFGTARF-ENPK 100 Query: 158 DVARMLKKDGKDS-DIRIGDLPIIRDS----EIQNFCLHGTVGAGKS--EVIRRLANYAR 210 V ++L ++ I ++ + D N + G GAGK+ EV L Sbjct: 101 QVNKILADKDENFNRILSQNVKMSLDFRRLKLNGNILICGGSGAGKTFYEVKPNLMQ--M 158 Query: 211 QRGDMVVIYDRSGEFVKS-----YYDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTA 264 + D GE ++S + K++N L+ + ++ + + D Sbjct: 159 PHNCSFICTDPKGEILRSCGQMLKNNGYNLKVINLLEMDKSDCYNPFSYIREETDVVKLI 218 Query: 265 NTLI----PMGTK-EDPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIK---- 312 LI P G DPFW+ + Y + + R++ ++ L + Sbjct: 219 TNLISNTTPKGATPSDPFWEKAEGLFLQAIFYYVWLEVQPAKRNFETVLKLLGEAEVTEQ 278 Query: 313 ------------IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH- 359 +E+ N PA + + ++R+++ + + +L+ + Sbjct: 279 GKASKLDVRMKFLEESSPLGANHPAVKQYNKCMRGAGDTVRSIIISANSRLAFLENKQVL 338 Query: 360 ---NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL-----LA 411 + + + D GV D + D+ S +I + + + L Sbjct: 339 RLLSKDELNLSDIGIGVNGDGETKTALFCVIPDSDKSYNFIIGLLYTQIFQELYYQADFN 398 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 G V F DE + D +L R + IQ++AQL+ ++ + + Sbjct: 399 CGGRLPIHVTFMLDEFANVALPDDYCSLLSTMRSREISSIIIIQNFAQLKALF-KDTWET 457 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 + +T + ++ + +G+ K S + G S D+ + L Sbjct: 458 IPGNCDTFIYLGGNEQSTHKYVSELLGKGTIDKKSSGETKGRQGSS---SRNYDVLGREL 514 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 + +++ L + C + + G P + P Sbjct: 515 FTPDEVRKLDNKKCIIFIRGFDPIMDNKFIPFNHP 549 >UniRef50_D0ZHL9 Type IV secretory pathway component n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZHL9_EDWTE Length = 645 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 85/557 (15%), Positives = 173/557 (31%), Gaps = 64/557 (11%) Query: 110 SAFVLAAVVALVICLITFFVVSWILGRQ----GKQQSENEVTGGRQLTDNPKDVARMLKK 165 S ++ + L++ + V+ R+ K + ++ D+ V + Sbjct: 66 SWLTISGLGGLIVVCLPLLVIFSPAKRKLFGDAKWATTKDIAKAGLFADDGIIVGQKTSF 125 Query: 166 DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGK--SEVIRRLANYARQRGDMVVI----- 218 G + Q+ + +GK S VI L ++ G V++ Sbjct: 126 MGLSKRFLVYG-------GNQHALMSAPTRSGKGVSVVIPTLLTWS---GSTVILDLKQE 175 Query: 219 -YDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQP-----DFDNTANTLIPMGT 272 +D + F ++ L P + R W+ P D L P Sbjct: 176 NWDITSGFRSAHGQDCYLLNLAPRNHRTHRWNPLYYISDDPAFRINDIQKIGQMLFPKID 235 Query: 273 KEDPFWQGSGRTIFAEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLRN-SPAANLV 329 E P WQ S R+++ + + + + L E+L + + N + Sbjct: 236 NEAPIWQSSARSLWLGIVLYLIETDELPVTMGEALRQLTMGD-ERLAEIIEERQESDNPL 294 Query: 330 E-----------EKIEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQ 377 + +KT S+R T ++ + F +RD + Sbjct: 295 SRECYLALKEYLDTPDKTRGSVRKGFTAALELFYNPMIDAATAENDFDLRDL------RK 348 Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKL 433 K ++++ D L P+I+++ I R L + DE + K+ Sbjct: 349 KRMSVYVAITPDDLDRLAPLINLFFQQVIDQNTRELPEQNPELKYQCLLLPDEFTAMGKV 408 Query: 434 PDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFA 493 L + + +G + IQS AQL ++YG A + + + F + K+A+ Sbjct: 409 GILSKSISYIAGYGLRMLPIIQSPAQLREVYGADATETFMENHALQIIFAPKNIKVAKEI 468 Query: 494 AGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY 553 + +G S R S + L+ +++ + + + + Sbjct: 469 SETLGTTTVKNKSRTRQLVGKASR---SENASDHSRALLLPQEVKGIGEKAEILIMENTP 525 Query: 554 PAVKLSLK------YQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV 607 P + + R D P+ S + + R+M L Sbjct: 526 PIRCEKVTWYKEKVFSERGNNLKALEQGD--PDAIKWPSPEVPKLDPSSRKMGELDFRSN 583 Query: 608 PEVVSGEDVTQAEQPQQ 624 + V + Q Sbjct: 584 AVSEANRTVIERPVTAQ 600 >UniRef50_B8I7H6 TRAG family protein n=23 Tax=Bacteria RepID=B8I7H6_CLOCE Length = 606 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 86/515 (16%), Positives = 169/515 (32%), Gaps = 73/515 (14%) Query: 187 NFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDK--------- 236 + + G G GK+ + YA G + D G+ ++Y + D Sbjct: 102 HCLMIGAAGVGKTANFLYPNLEYACASGMSFLTTDTKGDLFRNYGSIAKDYYGYKVSVID 161 Query: 237 ILNPLDARCAAWDL------WKEC------------LTQPDFDNTANTLIPMGT------ 272 + NP R ++ + + + TA T++ G Sbjct: 162 LRNP--TRSDGNNMLHLVNKYMDAYLKDPDNLSLKARAERYAKITAKTIVNSGGMDAGAY 219 Query: 273 KEDPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTL----------LSIKIEKLRTY 319 ++ F+ + + ++ R + + + + L Sbjct: 220 GQNAFFYEAAEGLLTFVILIIAEYCPPEKRHIISVFKLIQDLLAPSGVKGKNQFQLLIEK 279 Query: 320 LRNSPAANLVEEKIEKTA-ISIRAVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQ 377 L A TA ++++VL+ + + +L F + Sbjct: 280 LPPEHKARWFAGAALNTAEQAMQSVLSTALSRLNAFLDSELEQILCFDTAVDAEEFCNTK 339 Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR----NRRVWFFCDELPTLHKL 433 +L + T IS+ + R +L++ + RV FF DE+ T+ K+ Sbjct: 340 HAVFLVMPEEDSTK---YFFISLIVQQLYREILSVADEAGGRLKNRVMFFLDEIGTIPKI 396 Query: 434 PDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR-SPSHKIAEF 492 + +R V IQS+AQLE YG++ AA + D F +P+ AE Sbjct: 397 DSAEMMFSASRSRRISIVAIIQSFAQLEKNYGKEGAAIIIDNCQLVLFGGFAPNSHSAEI 456 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 + +G K + S R+ S M ++ L++ ++++LP + G Sbjct: 457 LSQALGNKTVMSGSISRG------RNDPSQSLQMIQRPLMTTDELKTLPKGNFILAKTGC 510 Query: 553 YPA-VKLSLKYQTRPKVAPEFIPRDINPEMENRL----SAVLAAREAEGRQMASLFEPDV 607 YP L L ++ + +I + ++ L +G + D Sbjct: 511 YPMKTILKLFFKWGIVFNKVY---EITEKSSRKVAYADRMELEQEILKGHAACNYINEDE 567 Query: 608 PEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVP 642 PE +D Q+ + P D + + P Sbjct: 568 PEDTVLQDGFSHINKQRYIEPEQADTQQEQKSKPP 602 >UniRef50_C3RGR5 TraG family mobilization protein n=2 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3RGR5_9BACE Length = 449 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 107/316 (33%), Gaps = 41/316 (12%) Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIR-RLANYARQRGDMVVIYD---------------RS 222 I+ ++ + + G G+GKSE + L + ++YD Sbjct: 90 IVLNNPFRGVFVLGAAGSGKSESVGVPLLGQFIEHNYAGIVYDFKFPTLANDVEAFVKAK 149 Query: 223 GEFVKSYY----DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFW 278 ++ +Y +P +NPL+ + + Q L+ K+ FW Sbjct: 150 SARLRHFYLDFNNPLRSYRVNPLNPKYLPNTSYAREYAQA----IVANLLKESIKKPDFW 205 Query: 279 QGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV------- 329 S + + +R + + + S ++ L N+ A + Sbjct: 206 TRSATDLLTACIWYLREERPDICDLPHVFAMITSNDVDLLNLLQTNTQTAQMTMSIYNAM 265 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNAD 389 + K + + L + + + + F+ D+ V + Q L + S Sbjct: 266 QRKADGQVSGVIGTLQGAIAQLNTPELMY----IFSGDDFSLNVNDPQNPIVLTVGSYPT 321 Query: 390 THASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 + P+ S+ +++A + M + + DE PT+ +P+L + R Sbjct: 322 LTQTFAPLCSLVITVATKL---MNQPAKAPSFVLLDEAPTIF-VPNLEVLPNTGRSNKVA 377 Query: 450 YVFGIQSYAQLEDIYG 465 V Q AQL D YG Sbjct: 378 TVLMCQDLAQLTDGYG 393 >UniRef50_Q2Y574 TRAG protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y574_NITMU Length = 661 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 70/420 (16%), Positives = 128/420 (30%), Gaps = 76/420 (18%) Query: 173 RIGDLPIIRDSEIQNFCLHGTVGAGK--SEVIRRLANYARQRGDMVVIYDRSGE---FVK 227 + P + E+ N GAGK S V+ L + V+ D GE Sbjct: 46 TLNGRPFGWNEEM-NLLTCAGPGAGKGVSTVVPNLLEFPGS----AVVVDPKGELASMTA 100 Query: 228 SYYDP---SIDKILNP-------LDARCAAWDLWKECLTQPDFDNTANTLI------PMG 271 ++ +L+P D R ++ + E F TA +I P Sbjct: 101 AFRRDVLGQKVIVLDPARTAKVSEDLRGT-YNPFDELDADDPFVTTAAQVIASGIVVPNP 159 Query: 272 TKEDPFWQGSGRTIFAEAAYLMRNDPNRSYS--------------KLVDTLLSIKIEK-- 315 ++PFW + M + L D + K E+ Sbjct: 160 KAKEPFWDDNALDFIQSCILYMVRHYPPNLRTLMKLRETVSMGDSDLFDAYVRRKQEEDP 219 Query: 316 -------------LRTYLRNSPAANLVEEKIEK-------TAISIRAVLTNYVKAIR--- 352 L+ ++ E K T S+ + ++ ++ Sbjct: 220 DFMGSESDAFGLFLKEMFNTPDFGGVIRETAAKIGRMGENTKGSVLSTAATHLDFVKSPE 279 Query: 353 ---YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL 409 LQ F +R+ +R + + +++ D M +S I+ + Sbjct: 280 LWDVLQSNPDPSRTFRLRE----LRRNDRPLTVYLCLPVDMIPRQGRWFRMIISRIIQSI 335 Query: 410 LAMG--ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 + R+ V DE L +P + L +R FG +Q QL+ Y Sbjct: 336 ERSEFDKKRDHPVLMMIDEFFQLGPIPSITNTLTYSRSFGLRLWLIVQDLNQLKTNY-PD 394 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A ++ + FF A++ + IGE+E S + + S+ + Sbjct: 395 AWETILGSCGIKQFFGVNDLVTAKYVSELIGEEEIDIPSISLTKTSSGTESRNSSQTHSQ 454 >UniRef50_Q03BN9 Type IV secretory pathway, VirD4 component n=2 Tax=Lactobacillus casei RepID=Q03BN9_LACC3 Length = 819 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 99/542 (18%), Positives = 190/542 (35%), Gaps = 84/542 (15%) Query: 182 DSEIQNFCLHGTVGAGKSEVIRR-LANYARQRG--DMVVIYDRSGEFVKS----YYDPSI 234 D+ N G GK+ + + ++ + D V+I D GE ++S + Sbjct: 176 DTSGTNTVAVAGPGGGKTTLFSLPVLDFIMRASVHDSVIITDVKGEMLRSTKAEFEARGY 235 Query: 235 DKI-LNPLDAR-CAAWDLWKECLTQP---DFDN-------TANTLIPMGTKEDPFWQGSG 282 LN +D A++ + DFDN + ++ ++P W+ S Sbjct: 236 RVAALNLVDPTYSIAYNPLELVKQAYAAGDFDNAQMLCNTFSYSIFHNPNAKEPMWEQSS 295 Query: 283 RTIFAEAAYLM------RNDPNR----SYSKLVDTLLSIKIE----KLRTYLRNSPA--- 325 ++ + ++ P + + + ++ L + E KL + P+ Sbjct: 296 ISLLNALILAVCKVCFDQHTPEKITMYTVTTMLSELGANPDENGMTKLDKFFSKLPSGDP 355 Query: 326 ANLVEEKIE-KTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDW-MRGVREDQKNGWLF 383 A L I+ I+ + T + I+ + G D+ + + K F Sbjct: 356 AKLQYGTIQFSQGITRSGIFTGTMAGIKNYA-FSNIGRLTATNDFNIADLATGDKPVAFF 414 Query: 384 ISSNADTHASLKPVISMWLS-----IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVE 438 I D S +++ +LS +A LA RRV +EL L ++ L Sbjct: 415 IIY-PDYDNSNYSLVATFLSQVGYVLAKMATLAADSKLKRRVINLYEELGNLPRIEGLPH 473 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 L R G Y +QS AQLE YG++ AA + + + ++ AE+ + +IG Sbjct: 474 YLNVGRGRGLVYYLILQSIAQLEANYGKEGAAEIMGACGNKYDILADNYDDAEYFSKQIG 533 Query: 499 EKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP------ 552 + + S +GA P+ S G+ E + L+ ++ L + Sbjct: 534 QTTVIAPSR---HGA-PMDTDKSFGESQETRRLMMPDELLRLRKGEVVLIRSKQRSDLNN 589 Query: 553 -----YPAV---------KLSLKYQTRPKVAPEFI-------PRDINPEMENRLSAVLAA 591 +P S +Y TR F P + +++ L + Sbjct: 590 RSITAWPIHANPDEGTELPFSFEYLTRFNHQATFAELYGDKKPAHNDIDLKKLLLDITVT 649 Query: 592 REAEGRQMASLFEPDVPEVVSGEDV-TQAEQPQQPVS----PAINDKKSDSGVNVPAGGI 646 + P++ V+G + + ++PQ S A ++ PA G Sbjct: 650 TIEPQNENDD---PEITVKVNGHSLNAENDEPQVEQSASEPAATDENLEQKTEETPAAGS 706 Query: 647 EQ 648 ++ Sbjct: 707 QK 708 >UniRef50_A2RL04 Conjugal transfer protein TraD n=14 Tax=Lactobacillales RepID=A2RL04_LACLM Length = 612 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 87/575 (15%), Positives = 186/575 (32%), Gaps = 90/575 (15%) Query: 82 QYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFV---LAAVVALVICLITFFVVSWILGRQG 138 Y K + + +L +++LW F AA+V V+ + ++ G Sbjct: 42 SIYSKEIFLTSGDLLGYF-----NKELWHFFYHPSFAALVCGVVFFLVGMLMFVYNNDSG 96 Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI--------IRDSEIQNFCL 190 ++ E G +++ + + +++ I ++ + + + ++ + Sbjct: 97 IYRTNVEH--GSARLAKEEELEKYRDPEPENNKILSKNVQMGLFNDRLPQKVQKNKSDMV 154 Query: 191 HGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV--------KSYYDPSIDKILNPLD 242 G GA K+ + + Q VI D G V K+ Y+ I LN L Sbjct: 155 LGDSGAAKTLAL--IMTNIMQLNASFVITDPDGGLVYRVGAMLKKAKYNIKILD-LNTLT 211 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKED----PFWQGSGRTIFAEAAYLMRNDPN 298 ++++ T+ D D + D FW + + + D Sbjct: 212 -NSDTFNIFNYIKTELDIDRVLEAITEGTKSSDNQGEDFWVKAEALLVRAIIAYLWFDGK 270 Query: 299 RSY--------SKLVDTLLSIKIEK---LRTYLRNSPAAN----------LVEE-KIEKT 336 + S ++ L +K + + L + +T Sbjct: 271 DNNYTPHLGMISDMLRYLERDDPKKPSPVEELFDEQNKLHPDNYAYRQWSLFNDLYKSET 330 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED-----QKNGWLFISSNADTH 391 S+ + + + Q +RD +R D ++ +FI+ +T Sbjct: 331 RASVLGIAASRYSVFDHDQ----------LRDMIRHDSMDIESWNEEKTAVFIAI-PETS 379 Query: 392 ASLKPVISMWLSIAIRGLLAMGE------------NRNRRVWFFCDELPTLHKLPDLVEI 439 S + +++L+ + L A + + V F DE + K+ + E Sbjct: 380 KSFNFIANIFLATIMETLRAKSDRIRLGREQLAPGKKLLHVRFLIDEFANIGKIANFEEA 439 Query: 440 LPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGE 499 L RK ++ +QS AQL+ +Y + + D + + K EF + +G+ Sbjct: 440 LATFRKREMSFMVILQSLAQLKKMY-KNNWEEIVDNCASLIYLGGDDPKTLEFLSKRLGK 498 Query: 500 KEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS 559 + + G S +D + L+ +I ++ C V + L Sbjct: 499 QTISLRKHSI---SKGGSGGGSESRDKTGRDLMMGDEIATIDGDECLVFIKKERGF--LD 553 Query: 560 LKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREA 594 KY + + R+ + + E Sbjct: 554 RKYYAYEHPRADELARNPGDKNWFNYRRYMNEEEK 588 >UniRef50_A0M135 TraG/TraD family protein n=2 Tax=Flavobacteriaceae RepID=A0M135_GRAFK Length = 527 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 69/457 (15%), Positives = 157/457 (34%), Gaps = 56/457 (12%) Query: 162 MLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE-VIRRLANYARQRGDMVVIYD 220 + + D +IG++ + + G+ G+GK+E V+ + +Q VI+D Sbjct: 87 QVNFKTRGKDFKIGNIK-------RGASIIGSAGSGKTESVVYGFLKHFQQYNFCGVIHD 139 Query: 221 RSGEF------VKSYYDPSI-------DKIL---NPLDARC-AAWDLWKECLTQPDFDNT 263 +F + + I DKI+ NP+ R + E ++ +N Sbjct: 140 YK-DFELTEMAYPLFRNSDIPFKIISFDKIIHRVNPIAPRYMENEESVNEI-SRVLIENL 197 Query: 264 ANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLR 321 + F+ + + + ++ + L+ + E L +L Sbjct: 198 LEQKETGTSGTTKFFNDAAEGLIGGMIWKLKTSYPQYCTLPHLIAIYQFLDTESLIAFLD 257 Query: 322 NS------PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRE 375 ++ A + + E+ +++ L N +K I + D + Sbjct: 258 SNRTSRAMADAFISGKDSERQTAGVKSTLANALKRISTQSIFM----ALSADDVPLNINN 313 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPD 435 + + I +N +S PVI+ + + M + + +E PT+ +L + Sbjct: 314 PENPAVISIVNNPKFESSYSPVIAAIIHTITKQ---MSVRNSNPSFLLMEEAPTI-RLLN 369 Query: 436 LVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAG 495 + I R + ++ +Q Q + +YG+KA+ ++ ++ + F + A++ Sbjct: 370 MHRIPATLRSYDIATIYVMQDKIQNDMMYGDKASKAILSNLSYQFFGKVNDPDTAKYYER 429 Query: 496 EIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPA 555 + ++ S G + D + E + L G Sbjct: 430 FF--EIIKDPTKSVSSGHNLNFDTRVITGENEI-PKIRADVFFRLKQGEFITYADGKDKK 486 Query: 556 VKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAR 592 ++ L+ I R++ E++ A L A Sbjct: 487 IQFKLQR----------ILRELPEEIQEFSHAALEAN 513 >UniRef50_B6A5A8 TRAG family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A5A8_RHILW Length = 902 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 93/572 (16%), Positives = 182/572 (31%), Gaps = 69/572 (12%) Query: 19 IRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPV 78 + + +++ + +F G++++ + + G Q Sbjct: 119 LLHVRSVFSLIAHTALVFAAAYAGVIVYGVAFYLVATKAGEHAEIAGYYGNHLAAMYQAP 178 Query: 79 YEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQG 138 + ++ + Q + + F + A + Sbjct: 179 FGATDTAGIYQQPSRQTVLASLAGLAAAGALVGFPIGAAI-------------------- 218 Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGK 198 Q + GR KD A +D + + + ++R+ Q+ + G+ G GK Sbjct: 219 --QRRQRMIMGRARLATLKDAADFRLRDKRGIVLGLKQGLLLRNDGDQHVMVIGSPGQGK 276 Query: 199 SEVIRRLANYARQRGDMVVIYDRSGEFVKS----YYDPSIDKIL-----------NPLDA 243 S + ++ D SGE + D + L NPLD Sbjct: 277 SRGF--VIPTMMSFEGSQMVLDMSGELFEETSGYLKDKGYEVFLLAPGSKFTDGYNPLDL 334 Query: 244 RCAAWDLWKECLTQPDFDNTANTLIPMGTKED--PFWQGSGRTIFAEAAYLMRNDP--NR 299 + D L+P + D FW+ S R + + P + Sbjct: 335 VSTEPN-----QRITDLQKLTQMLLPERLRSDSSDFWEESARILLTAMLGFVLECPDTRK 389 Query: 300 SYSKLVDTLLSIKIE--KLRTYLRNSPAA---------NLVEEKIEKTAISIRAVLTNYV 348 S S+L L S+ E + L N A + EK I A + V Sbjct: 390 SLSELYRILNSMSDERKAIVQLLENYEAVLSDQTRMQLTKFAGRHEKLGEGIAAEI---V 446 Query: 349 KAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRG 408 + +LQ +I + ++ ++I ++ + + +ISM++ Sbjct: 447 AKLNFLQNPLVEALT-SITS-IPIDTIRKRKMVVYIQADWNAMQIYERLISMFIQQMADK 504 Query: 409 LLAMGE--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGE 466 L+ +G N V DE ++ ++ + P RK G +VF +Q AQLE +Y Sbjct: 505 LVQLGPLRNGEHEVLMMLDEFGNGGRIDTVLTLAPLIRKNGVRFVFILQDGAQLERLYQR 564 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 L + F + + A + G+ + EQ SY R S K Sbjct: 565 SGQKILMGASTIKLFMNFQNQEDATAVSLAAGKTT--EWVEQSSYSHRHGRRQRSISKVP 622 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL 558 L+ + + + + + G P +++ Sbjct: 623 VSVDLLPVNTLIMMKPEEAILQVTG-MPLMRI 653 >UniRef50_D1LZH1 TraG n=1 Tax=Rhizobium leguminosarum bv. viciae RepID=D1LZH1_RHILV Length = 906 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 124/747 (16%), Positives = 239/747 (31%), Gaps = 95/747 (12%) Query: 8 MTQGGQIASMR---IRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCT 64 M +GG+ S + + + +++ + IF G++++ G ++ Sbjct: 105 MLKGGRALSRKILYLLHVRSMFSLIAHTALIFTAAYAGVIVY----------GVAFYMVA 154 Query: 65 TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQV-LHDKYMIWCSEQLWSAFVLAAVVALVIC 123 T G I S Y + ++ + D Y + + +A A ++ Sbjct: 155 TKAGEHAEIAS---YYGNHLAAMYQAPFGAIDAADAYQKPSRQTVLAALAGLAAAGAIVG 211 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA--RMLKKDGKDSDIRIGDLPIIR 181 + Q + G+ KD A R+ K G ++ G ++R Sbjct: 212 FPIGAAI----------QKRQRMIMGKARLATLKDAADFRLRDKHGIVLGLKQG--LLLR 259 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS----YYDPSIDK- 236 + Q+ + G+ G GKS + V+ D SGE + D + Sbjct: 260 NDGDQHVMVIGSPGQGKSRGF--VIPTMMSFQGSQVVLDMSGELFEETSGYLKDKGYEIF 317 Query: 237 ILNPLDARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKED--PFWQGSGRTIFAEA 289 +L P ++ P D L+P + D FW+ S R + Sbjct: 318 LLAPGSKFTDGYNPVDLISDDPNQRITDLQKLTQMLLPERLRSDSSDFWEESARILLTAM 377 Query: 290 AYLMRNDP--NRSYSKLVDTLLSIKIE--KLRTYLRNSPAA---------NLVEEKIEKT 336 + P +S S+L L S+ E + L N + EK Sbjct: 378 LGFVLECPDTRKSLSELYRILNSMSDERKAIIQLLENYEPVLSDQTRMQLTKFAGRHEKL 437 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 I A + V + +LQ +I + ++ ++I ++ + + Sbjct: 438 GEGIAAEI---VAKLNFLQNPLVEALT-SITT-IPIDTIRKRKLVIYIQADWNAMQIYER 492 Query: 397 VISMWLSIAIRGLLAMGE--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 +ISM++ L+ MG N V DE ++ ++ + P RK G +VF + Sbjct: 493 LISMFIQQMADKLVQMGPLRNGEHEVLMMLDEFGNGGRIDTVLTLAPLIRKNGVRFVFIL 552 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD 514 Q AQLE +Y L + F + + A + G+ + EQ SY Sbjct: 553 QDGAQLERLYQRSGQKILMGASTIKLFMNFQNQEDATAVSMAAGKTT--EWVEQSSYSHR 610 Query: 515 PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL---------------S 559 R S K L+ + + + + + G P +++ Sbjct: 611 HGRRQRSISKVPVSVDLLPVNTLMMMKPEEAILQVTG-MPLMRIMKLDSGGERMFSKVRK 669 Query: 560 LKYQTRPKVAPEFIPRDINPEMENRLSAVLAARE--------AEGRQMASLFEPDVPEVV 611 K RP + P + I+ + + +G + + D Sbjct: 670 FKPAKRPCIEP--VEWTIDDSKSAAAAPASTGTDIDAVRFVVKDGVRHVYISSLDELRHR 727 Query: 612 SGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGE 671 D T+ ++ V + D PA G +++ M E ++ G+ E Sbjct: 728 LDLDETREAGVEEEVQAEKKKQSGDKRKRDPASG-QRKGGMPKTPEAARESDIGLDIDEE 786 Query: 672 VVDMAAYE-AWQQENHPDIQQQMQRRE 697 + Y + + Q + Sbjct: 787 KLSSNVYSGSPAHRSLRAKQANGPSDQ 813 >UniRef50_Q03N56 Type IV secretory pathway, VirD4 component n=2 Tax=Lactobacillaceae RepID=Q03N56_LACBA Length = 543 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 67/372 (18%), Positives = 132/372 (35%), Gaps = 30/372 (8%) Query: 204 RLANYARQRGDMVVIYDRSGEFVKS----YYDPSIDKILNPLDARCAAWDLWKECLTQPD 259 L ++ D E +K + + + +NP ++D T D Sbjct: 167 NLIPTLLTFQGNALVVDIKPELLKRTGHLHPNKEVLNFINPK----QSYDPLATLQTYTD 222 Query: 260 FDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRT 318 + A TLIP+ + ++P+++ S + I A A + +S+S++ + L + + + Sbjct: 223 VTDLAKTLIPISSDIKEPYFRESAQNILASACWEF--KGQKSFSEIAEFLTATPADAIIK 280 Query: 319 YLRNSPAA------NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH--NGEPFTIRDWM 370 L S + N V + S+ L N + ++ +I Sbjct: 281 QLSASSKSETRILINAVAGIKTEQLASVMNELRNTLVIFATDPVLKQLAGHSANSI---- 336 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTL 430 +D + W+++ +P +++ ++ R L E + DE P L Sbjct: 337 --QPQDIETNWIYLVLPESKLKVYQPYLALIVAQFTRYLTQRPEKSQPNLLLALDEFPRL 394 Query: 431 HKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIA 490 LP + + R + +QS AQL+ +Y E + D M+ + H Sbjct: 395 GYLPAFADAISTLRSRNVSVMILLQSLAQLDQLYQETGRKIIMDNMHYVVVHNALDHTSQ 454 Query: 491 EFAAGEIGEKEHLKASEQYSYGA-----DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 ++ + G K + S Y G D + ST + + L+ + +L Sbjct: 455 QYFSDRAGTKTAVAKSHSYGTGGSGGTIDALFGSSSTSYNQQSAPLIRPEEFATLKQPIL 514 Query: 546 YVTLPGPYPAVK 557 Y G P K Sbjct: 515 YAYQLGITPVDK 526 >UniRef50_C1XZF6 Type IV secretory pathway, VirD4 component n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZF6_9DEIN Length = 776 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 70/443 (15%), Positives = 146/443 (32%), Gaps = 52/443 (11%) Query: 133 ILGRQGKQQSENEVTGGRQLTDNPKDVAR-MLKKDGKDSDIRIGDLPIIRDSEIQNFCLH 191 + + ++ LT + +A + + + IG +P E+ + + Sbjct: 77 LYSALRARYADARELRRMTLTPANRALALPLARLSPDKGEPLIGSVPTPAKKELDHLLVV 136 Query: 192 GTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK--SYYDP---SIDKILNPLDARCA 246 GK IR+ G V+ D G+ + + +L+P + + Sbjct: 137 APTRGGKGLHIRQTLW---HWGGSAVVVDLKGDAYRETALRREELGGRCFLLDP-EGYGS 192 Query: 247 AWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVD 306 +D + E + + A ++ +DP + + YL + + S L+ Sbjct: 193 CYDPFSEMVRDESVASAAQLMMVSAQDKDPIFSERASYLMEAFIYLAQYRQESTTS-LMY 251 Query: 307 TLLSIKIEKL-----------------RTYLRNSPAAN---LVEEKIEKTAISIRAVLTN 346 L+S + + R L + A +K +K S + Sbjct: 252 GLMSRGEDAVYLEFKRLKQQPPLPDRPRELLEKAIARFNFFYGSDKDDKFRASCYGTFST 311 Query: 347 YVKAIRYLQ-GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 + + FT RD + ++ L+I + + K ++ + +S Sbjct: 312 RARPLVSEGVRAMTQRSDFTARDLI------ERPTTLYIRLSEENLDFTKGIVQILISTL 365 Query: 406 IRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 L + V F DE + +P + + +Q +QL Sbjct: 366 TGQLTRTIDREQGGYARVPVLFVFDEAKRIP-IPSIANGVSTWAGRNMYAAIYVQDMSQL 424 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 E YGE A ++ + +P+ + A++ + ++G E YSY A +DG Sbjct: 425 EGTYGEGDAKTVLANTAQIFYLGNPNLETAQYVSQKLGRIEVP----SYSYTAQRSKDGQ 480 Query: 521 STGKDMERQTLVSYSDIQSLPDL 543 S + + D+ S+ D Sbjct: 481 SRSMSYNLREV----DLLSVDDF 499 >UniRef50_Q8VW38 Putative transposase n=1 Tax=Klebsiella pneumoniae RepID=Q8VW38_KLEPN Length = 412 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 10/253 (3%) Query: 325 AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDW-MRGVREDQKNGWLF 383 +A + K E + + +++ R DW + + ++ L+ Sbjct: 19 SARELLNKSENERSGVLSTAMSFLGLYRDPVVARVTAR----CDWRIADLVGSRRPVTLY 74 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLAM--GENRNRRVWFFCDELPTLHKLPDLVEILP 441 + KP+I + L+ R L + R+ DE P L +L L Sbjct: 75 LVVPPSDINRTKPLIRLILNQIGRRLTEELTTSGKRHRLLLMLDEFPALGRLDFFESALA 134 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 +G QS Q+E YG A + D + R F + + A+ + +G Sbjct: 135 FMAGYGIKGFLIAQSLNQIERAYGPNNA--ILDNCHVRVSFATNDERTAKRVSDALGAAT 192 Query: 502 HLKASEQY-SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL 560 L+ S Y + P + + + L++ +I LP V + G P Sbjct: 193 ELRDSTNYAGHRLAPWLGHLMVSRQETARPLLTPGEIMQLPPTDEIVMVAGTPPIRATKA 252 Query: 561 KYQTRPKVAPEFI 573 +Y + + Sbjct: 253 RYFEDARFQERIL 265 >UniRef50_C9D4W2 Trag family protein n=2 Tax=Silicibacter sp. TrichCH4B RepID=C9D4W2_9RHOB Length = 1045 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 88/577 (15%), Positives = 188/577 (32%), Gaps = 52/577 (9%) Query: 115 AAVVALVICLITFFVVSWILGRQGKQ------QSENEVTGGRQLTDNPKDV--ARMLKKD 166 V L + ++W ++ Q++ E+ L K ++ Sbjct: 65 FGAVGLSSIGLGALALAWTWTKERDDYGSAHWQTKAELKKNDMLQAPGKGFVCGKLGAPH 124 Query: 167 GKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE 224 K I +P + + AGK VI L ++A VV+ D GE Sbjct: 125 SKAEFISSTMIP--------HVMMVAPTRAGKGVGFVIPNLLSFAGS----VVVLDVKGE 172 Query: 225 FVK-----SYYDPSIDKILNPLD--ARCAAWDLWKECLTQPDFDN-------TANTLIPM 270 + + +P D ++ P F A+ + Sbjct: 173 NFEKTARLRALNGDEVYRFSPFDWANATHRYNPLSRIAKAPSFAQRFTEVSILADLFLDK 232 Query: 271 GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLR-TYLRNSPAANLV 329 K+ + +G++IF A L + ++ + + + + + +++ Sbjct: 233 DNKQLDTFSEAGKSIFVAACLLAIQRGTPNLGEVNKIVAGGEYKNAQYKTYADEAEEDIL 292 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG----EPFTIRDWMRGVREDQKNGWLFIS 385 E A + +LT+ ++A+ + + D+ L+I+ Sbjct: 293 RELWTNAASASSRLLTSNIQALMTAGLKQWDNPAVRSATEASDFDFSTFRKTPQS-LYIA 351 Query: 386 SNADTHASLKPVISMWLS--IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEA 443 + D A+L P++ + + IA + G + V DE + +P L + Sbjct: 352 VSEDHIATLAPLLRLMFADLIASIRMNEPGPDEPWPVMMMIDEFQQMGAMPYLERAIHSL 411 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 +GG QS A L+ IYG + SL + + + + + + +G Sbjct: 412 ASYGGRVAMIAQSLASLDRIYGPEGRESLENGAGLKLYITPRDQRTVKEVSAAVGSTTRE 471 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 + Y + ST +E + L+S ++ + + + +P +KY Sbjct: 472 AVTRMYGRNKGFL-GATSTSARLEERPLLSETEARLMDPDEVIILASPQHPIKASRIKYY 530 Query: 564 TRPKVAPEFIPRDINPE-MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQP 622 P ++ P + V +G + + E ++ Sbjct: 531 DDPYFKAMLARQEGKPFPYPPSVQGVGPWDSVDGDAALAD-----EQAKPAERAPVRDRS 585 Query: 623 QQPVSPAINDKKSDSGVNVPAGG-IEQELKMKPEEEM 658 Q+ + A++ K ++G P +E+E + E E Sbjct: 586 QRRETRAMSLKTMEAGRGQPEPETLEREAAVPKEWEA 622 >UniRef50_C0BU69 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BU69_9BIFI Length = 611 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 72/530 (13%), Positives = 156/530 (29%), Gaps = 109/530 (20%) Query: 120 LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI 179 C + F + Q + E G +++A D + + + Sbjct: 67 GGACAVGLFHLYRWSTSQRNWRDGEEY--GSARWSTSREMAPYTDNDTRQNLQMTATEGL 124 Query: 180 IRDSEIQ----NFCLHGTVGAGKS--EVIRRLANYARQRGDMVVIYDRSGEFVKS----- 228 D++ N + G G+GK+ VI + + D GE Sbjct: 125 SLDAQATRRNLNTTVIGGSGSGKTATHVIPNILKGSMNYA----CTDPKGELYAKTSGKL 180 Query: 229 ----YYDPSIDKI-------LNP---LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKE 274 Y +D + NP +D + + D N + P + Sbjct: 181 KKMGYTVKQLDLVDLTSETKFNPMRYIDPDKPDVAIMRLVTNIMDNTNGST---PKEHQT 237 Query: 275 DPFWQGSGRTIFAEA---AYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVE- 330 D FW S R++ Y + +D + + + +R L S E Sbjct: 238 DDFWTKSERSLLTALTAFVYYLPDDILKDCLNIDAGQTLNAVADMRDLLEASEQDETKES 297 Query: 331 --EKIEKTAISIRAV----------------LTNYVKAIRYLQGIEHNGEPFT------- 365 + + +TA I L + + L+ PFT Sbjct: 298 QVDAVARTATEIYEETRAEWNRDGADHDDPDLREAWRLAQGLKFAARQYRPFTQGAGETK 357 Query: 366 ------------------IRDWMR------------------GVREDQKNGWLFISSNAD 389 +R+ + G + +F++ D Sbjct: 358 KGIIISLGVRLAPLTVGPVREILSDDNLGIDRIGGYADEHKGGYKHPNGKTAIFLAL-PD 416 Query: 390 THASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEAR 444 + + +++ ++ + F DE + ++P+ +++ R Sbjct: 417 EDPTFNFLAAIFYQCLFDSIIRRCRTYPGECLATPLHCFLDEFANVGRIPNFDKLIATIR 476 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 +Q+ AQL+ +Y + + ++ ++ F E+ + +G++ Sbjct: 477 SRKVSVSIILQTIAQLKTMY-KDSWETIVGNCDSVLFLGGNEQSTTEWLSKLLGKETIDI 535 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP 554 + S G V +T + L++ ++ L + C +L G +P Sbjct: 536 RTTSDSKG---VSGSHTTNYQRTGRELLTPDELAQLDNDKCIYSLRGLHP 582 >UniRef50_C3WQ29 Conjugal transfer protein traG n=7 Tax=Fusobacterium RepID=C3WQ29_9FUSO Length = 709 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 82/522 (15%), Positives = 175/522 (33%), Gaps = 98/522 (18%) Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE--FVKSY 229 G + I ++ + L AGK +I L N+ V + D GE + + Sbjct: 166 FGKVRYIIENLKTHIALIAPSRAGKGTGVIIPTLLNWLGS----VFVLDMKGENYQITAG 221 Query: 230 YDPS--IDKILN--PLD-ARCAAWDLWKECLTQPDFDNTANTLI------PMGTKEDPFW 278 Y IL P +++ E ++ T+I P K+ W Sbjct: 222 YRKHALKQTILKFKPYGLEDSISYNPLAEVRIGTAYEVKDATIIADILTDPGEGKKRDHW 281 Query: 279 QGSGRTIFAEAAY---LMRNDPNR--SYSKLVDTLLSIKI------------EKLRTY-- 319 S +F MR + ++ +VD L S + L Y Sbjct: 282 DMSATALFIGLILHVLYMRRREGKIGTFGDIVDFLTSTDKTLEQNFIDLMEYKHLEDYSV 341 Query: 320 --------------------LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 + + A L K E+ S+ + + + + ++ Sbjct: 342 WNDIYDSSQMKGINPGTHPIVARTAAEIL--NKDERERASVISTVMAKLSLFKDPIIRKN 399 Query: 360 NGE-PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL------AM 412 F I+D M + + +I A+ +L ++ + ++ I L + Sbjct: 400 TSRADFRIKDLM----DYKNPVSFYIVVEAEQMDTLSLLLRILVTQTIGILAPEMDFSSD 455 Query: 413 GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 ++ F DE P +P + L +G + Q+ Q++ YG S+ Sbjct: 456 KPIHKHKMLFLMDEFPAFGTIPLFEKALAYIAGYGMKALIIAQALNQIKKNYG--DRNSV 513 Query: 473 FDVMNTRAFFRSP--SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 FD T F+ + + + +G+K + SY A + + + + + Sbjct: 514 FDNCATTVFYSPTPLDTETPKQISEMLGDKTIKV--KNRSYKAFQIGSS-NISESNQARR 570 Query: 531 LVSYSDIQSLPDLTC---YVTLPGPYPAVKLSLKYQTRP----KVAPEF-IPRDINPEME 582 L++ ++++ + +++ G YP + + L+Y K+ + IP+ + Sbjct: 571 LLTPEEVRN--KVAGKWNIISVTGLYPRIGVKLEYFREKYFKSKIHKVYGIPK--TDYLT 626 Query: 583 NRLSAVLA--------AREAEGRQMASLFEPDVPEVVSGEDV 616 N + + + +E E ++ + E + E++ Sbjct: 627 NEILSDIKTINTTTDFMKEEEDNKLDKRIREEFLENIENENI 668 >UniRef50_D1CWC3 Conjugal transfer protein traG n=1 Tax=Brucella sp. 83/13 RepID=D1CWC3_9RHIZ Length = 617 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 84/501 (16%), Positives = 162/501 (32%), Gaps = 61/501 (12%) Query: 101 MIWCSEQLWSAFVLAAVVALVICLIT--FFVVSWILGRQGKQQSENEVTGGRQLTDNPKD 158 M+ + A L +L I L FF++ I + G + + Sbjct: 113 MVSTWNRFTEAQKLGLQTSLAIGLPVPLFFILRAISIAAPASSNRTSKQGPWRARWMNRS 172 Query: 159 VARMLKKDGKDSDIRIGDLPIIRDSEI--------QNFCLHGT-VGAGKSEVIRRLANYA 209 R L+ + + + ++R + + GT G G S VI + + Sbjct: 173 ELRQLRHNDTGLPLGLSGCAMLRYRPNPKTGWRAGHHVAIAGTRAGKGVSVVIPAIID-- 230 Query: 210 RQRGDMVVIYDRSGE--FVKSYYDPS---IDKILNPL---DARCAAWDLWKECLTQP--- 258 V + D GE V Y S +LNP + +++ Sbjct: 231 --HDGPVAVLDVKGENFAVTRRYRQSLGRQVVVLNPFGVIEPSKDSFNPLDYIRQAHLVR 288 Query: 259 DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM---RNDPNRSYSKLVDTLLSIKIEK 315 D + A L+ + +++ A ++ R + +R+ ++D L S E Sbjct: 289 DIEVIAEGLVRPEGGNGAHFAEMAKSMIAAVIEVVMTSRAEADRNLITVMDVLFSAGFET 348 Query: 316 -LRTYLRNSPAANL--------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI 366 L + E +I+ + R + + Sbjct: 349 TLTEWAGAPETFGTRPAAAAATFLAAGENERGAIKTTIKKAFDWARSDE----------L 398 Query: 367 RDWMRGVREDQKNGW-----LFISSNADTHASLKPVISMWLSIAIRGLLAMG--ENRNRR 419 R ++ +N + LF+ D + + + +I + + + + + Sbjct: 399 RSFLSTSTCSLENLFEGRADLFMVVPLDQVDAQAVFLRLLTNIILGMAVRLEGAKKPKKN 458 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 V DE L ++ L+ I A G +F Q Q+E +YG+ AS+ T Sbjct: 459 VLLVLDEFVRLGRMEKLINIANVAAGCGIEALFITQDKGQIESVYGKGDTASILGSCVTT 518 Query: 480 AFFRSP--SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 F + A +AA +G++ L ++Q S R T +RQ L++ I Sbjct: 519 RIFGLGRAEFETANWAANALGDQTVLTRTKQSSAKFGESRK---TSTTEQRQKLMTADQI 575 Query: 538 QSLPDLTCYVTLPGPYPAVKL 558 + + L G P + Sbjct: 576 LEMKTGKM-LLLTGSKPPALV 595 >UniRef50_Q91UW5 TraN protein n=1 Tax=Plasmid pIPO2T RepID=Q91UW5_9ZZZZ Length = 837 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 97/613 (15%), Positives = 182/613 (29%), Gaps = 101/613 (16%) Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSID--KILNPL- 241 L +GK I + + V+ D E + + NP Sbjct: 135 VLLAAPTRSGKGVGI--VVPNLLNFSESAVVLDVKLENFLITSKFRAKHGQEVFLFNPFS 192 Query: 242 -DARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN 295 + + ++ P + L P G +D F+ + R +F + Sbjct: 193 KNGQTHRYNPLGYISNDPRQRVTEILAIGYALYP-GGGKDTFFDDAARNLFLGLCLYLCE 251 Query: 296 DPN--RSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK--------------------- 332 P R+ +L+ S K + ++ YL++ A +E+ Sbjct: 252 TPALPRTIGELLRQ-SSGKGQPIKKYLQDLITARNFKEETTIGDDGEEVVTLVPIDQWDG 310 Query: 333 --------------------IEKTAISIRAVLTNYVK-AIRYLQGIEHNGEPFTIRDWMR 371 + T SI A + + L F +RD Sbjct: 311 QGLPPLSMECVDALNRFTSTSDNTLSSILASFNVPLTIWVSPLVDAATAANDFDVRD--- 367 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR----GLLAMGENRNRRVWFFCDEL 427 +K ++I A+ A + +I+++ S I LL DE Sbjct: 368 ---VRKKRMTIYIGIPANKLAEAELLINLFFSQLINLNTDDLLHSKPELKYSCLLLMDEF 424 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE----DIYGEKAAASLFDVMNTRAFFR 483 ++ + + +G + IQS Q+E YG ++A +L + + Sbjct: 425 AAPGRIGIIDKANAYMAGYGLRLLTIIQSPGQIEAEPRKGYGRESARTLITNHACQIIYT 484 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDL 543 K A + +G G G S + +++ L+ +++ + Sbjct: 485 PREQKDANEYSEMLGTYTFKAKGSSRQLG-GKAAGGRSESESDQKRALLMPQELKEMSQR 543 Query: 544 TCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR--DINPEMENRLSAVLAAREAEGRQMAS 601 + L P + Y F+ R + P + + ++ E + Sbjct: 544 QQIINLENTKPIKCEKIAYFQDHV----FMDRLKSVAPSLAKLGKKLPTKKQLEDSWGSG 599 Query: 602 LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD--------SGVNVPAG-GIEQELKM 652 DVP + + + + PA K D S V +P G GIE E Sbjct: 600 ECAVDVPYLNLDLHEAVVQARMRELKPADVAKGIDLRTLALDFSKVPLPEGAGIEPEQVE 659 Query: 653 K------PEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRR--EEVNINVH 704 + E+ EV D A E + + Q +E+ +N Sbjct: 660 AFVDGFFDALDAANSYDDS--EAPEVDDDGASERPSDDELAALDAQAADDDGQEIAVN-S 716 Query: 705 RERGEDVEPGDDF 717 E +D P D+ Sbjct: 717 VEHADDETPADEL 729 >UniRef50_UPI000196DA88 TRAG family protein n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI000196DA88 Length = 678 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 93/599 (15%), Positives = 180/599 (30%), Gaps = 84/599 (14%) Query: 91 NAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGR 150 V+ S +L +A +L V+ + VVS + + E+ G Sbjct: 39 TEPSVMLLPAYWAHSARLPAAMMLPLQVSTALAAAIPLVVSVLSLVAVFAKPRRELHGSA 98 Query: 151 QLTDNPKDVARMLKKDG----KDSDIRIG--DLPIIRDSEIQNFCLHGTVGAGKSEVIRR 204 + + + L K+ D+ +G +R S + L +GK I Sbjct: 99 RFANRSEIKKTGLLKEKFQPEDAPDLLVGKYGGQFLRWSSKEFAYLAAPTRSGKGVGI-- 156 Query: 205 LANYARQRGDMVVIYDRSGE---FVKSYYDPSID--KILNP------LDAR------CAA 247 + D VV+YD E + + NP + Sbjct: 157 VIPNLLHYRDSVVVYDPKMENFLITAGFRAKHGQEVFLFNPGGRMPEHERNPNAPLVSHR 216 Query: 248 WDLWKECLTQP-----DFDNTANTLIPM---GTKEDPFWQGSGRTIFAEAAYLMRN-DPN 298 W+ P D A + P F+ + R +FA + +P Sbjct: 217 WNPLTYVRRNPTYTYKDALGVAAIMYPDPVNAGGSAMFFAEAARKLFAGLLMYLIETEPE 276 Query: 299 RSYSKLVDTLLSIKI---------EKLRTYLRN-------SPAANL----------VEEK 332 R L + + + L ++R+ SP A L Sbjct: 277 RDLGLLENRTTMANLFRLCAPTNGKTLSEWIRDEIELRSRSPQAALSGNCITLLSDFANG 336 Query: 333 IEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 KT I A +T + + G+ F + D +K +++ Sbjct: 337 NAKTGADIVATVTAPLGIFIDPVVEAATGGDDFRLDD------VRKKRMTVYLGVLPTET 390 Query: 392 ASLKPVISMWLSIAIRGLLAMGENRNRR------VWFFCDELPTLHKLPDLVEILPEARK 445 A + +++ S+ + G N DE L +P + + Sbjct: 391 AVFARLTNLFFSLLANVNVYQGLPENNPGILKYQCLMLMDEFTALGVVPAIEHGVSYLAG 450 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 + + Q+ +Q+E +Y + + F + F AE + +G + Sbjct: 451 YNMRLLPIFQTPSQMEKLYQKTGMRTFFTNFGCQIVFPPRDQSDAEEYSRLVGYQTFKAK 510 Query: 506 SEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR 565 S + S +++ +++ +++ +P C ++L P + Y Sbjct: 511 SSSR---SHGKSSSRSNSVSDQKRAVMNPDELKMMPKEDCIISLGSSRPIYAQKIVYWQD 567 Query: 566 PKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSG---EDVTQAEQ 621 P ++ + N + L A + Q A E PE + G +D AE Sbjct: 568 PVLS-----KRANLTLPEVPVLQLDAPKRAAPQAAVKAEYLAPEELDGFHWQDGANAED 621 >UniRef50_B3PCB8 TraG/TraD family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCB8_CELJU Length = 561 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 91/523 (17%), Positives = 164/523 (31%), Gaps = 86/523 (16%) Query: 191 HGTVGAGKSEVIRRLANY----ARQRGD------MVVIYDRSGEFVK-------SYYDPS 233 G G+GK +R L Y + +++ D GE + + Sbjct: 53 IGGAGSGK---LRDLLAYSLCGIQHENYGWLAPPRLLVNDPRGELAAISVHNQVRFGKAA 109 Query: 234 IDKILNPL------DARCAAWDLWKECLT--QPDFDNTANTLIPMGTKED-PFWQGSGRT 284 +NP R WDL D N LIP+ + +++ GR Sbjct: 110 --YCINPFGLHGLPQHRLNPWDLIDPASPTFHADLTLLVNDLIPLSGSSNAEYFEIRGRQ 167 Query: 285 IFAEAAY-LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIR-- 341 A + L D + +++ L + AA+ + +TA I+ Sbjct: 168 WCEALAQDYAVTFGTVTLLALYDMVNAVEDPDAWPVLYDRMAASP-SMDVRRTATEIQNK 226 Query: 342 ---------AVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED-----QKNGWLFISSN 387 A++ K + +L TIRD + G Q++ +++ Sbjct: 227 RKKVPKEYSAIMGELFKYLGFLNDP-------TIRDTLSGSDFSLEVLCQRDCNVYLMIP 279 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 A+ L P++ + A+ L RV F DE TL + L+ R G Sbjct: 280 AEYIHQLAPMLRAIIGAAM--LYKQRNPSAPRVLFLVDEAATLGRFESLLRGYTYGRGMG 337 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 Q Q+ YG A + R FF A + +G + E Sbjct: 338 IRVWSIWQDIGQISRNYGRDALSGFIGSSQMRQFFGVRDLDTARMVSAMLGSQTLEYDQE 397 Query: 508 ---------------QYSYGADPVRDGVSTGKD--------MERQTLVSYSDIQSLPDLT 544 + G DP G++ + + L++ ++ ++P+ Sbjct: 398 LDQMRAQVAQAQIISELFSGGDPFAAGMNYSYQAQAAIHRVKQARLLMTPDEVLNMPEDK 457 Query: 545 CYVTLPGP--YPAVKLSLKYQTRPKVAPEFIPRDINPEMEN---RLSAVLAAREAEGRQM 599 + + G P ++Y T P +A F+P +P +++ A R ++ Sbjct: 458 QVIFISGKNLMPIHADKVRYFTNPDMAGAFMPNPYHPPVDSVQVMTEAGAKRRPVITERV 517 Query: 600 ASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVP 642 + F + +P P K D V P Sbjct: 518 PAEFAHYPQYESGNWSFIKGYRPANNKPPHKRRKWKDFIVPGP 560 >UniRef50_A6GUT0 Conjugal transfer protein TraG n=1 Tax=Limnobacter sp. MED105 RepID=A6GUT0_9BURK Length = 753 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 72/410 (17%), Positives = 134/410 (32%), Gaps = 64/410 (15%) Query: 186 QNFCLHGTVGAGKS--EVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKILNP 240 ++ +GK +VI L ++ V++D GE Y ++L Sbjct: 199 EHLLTFAPTRSGKGVGQVIPTLLSWP----HSTVVHDIKGEAWALTAGYRKAKGHRVLKF 254 Query: 241 L----DARCAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAA 290 D ++ +E D N A ++ P G W +G + + A Sbjct: 255 EPSEPDGSSVRFNPLEEVRLRTPREVADVQNIAQMIVDPDGKGMADHWAKTGHELLSAAI 314 Query: 291 ----YLMRN-----------DPNRSYSKLVDTLLSI--KIEKLRTYLR-------NS--- 323 YL DP R+ ++ +++L+ + ++ N+ Sbjct: 315 LHILYLGHTKTLRGLVSFFCDPARTIEQVAESMLTGQHDPHGAQGWIDLNTGEPTNTHPV 374 Query: 324 --PAANLVEEKIEKTAISIRAVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQKNG 380 +A K E +++ +Y+ R + F I D M Sbjct: 375 VAESARSFLNKSENERSGVQSTAMSYLSLYRDPIVAANTEVSEFRIHDLMNF----DDPV 430 Query: 381 WLFISSNADTHASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHK 432 L++ + A L+P+I + L+ R + R+ DE P L K Sbjct: 431 SLYLVVPPNDKARLRPLIRLVLNQIFRQTTEKMDFADGRSVAGYKHRLLMMLDEFPALGK 490 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 L + E L +G Q QL YG+ S+ + R + + AE Sbjct: 491 LELVQESLAFVAGYGIKCYLITQDLTQLYAAYGKD--ESILSNCHVRMAYAPNKVETAEL 548 Query: 493 AAGEIGEKEHLKASEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDIQSLP 541 + G K + YS +P+ V + ++ L++ + LP Sbjct: 549 LSKYCGVTTINKQTRSYSGSRLNPLLMHVMAAEQETQRPLLTADECLRLP 598 >UniRef50_D0T015 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0T015_ACILW Length = 641 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 82/541 (15%), Positives = 166/541 (30%), Gaps = 92/541 (17%) Query: 99 KYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKD 158 +Y + + L + L++ + F VV G + +NE G + Sbjct: 43 QYQVPTGQGLRPLLDKVVLKVLMLEGLAFLVVVITCGFITNSRRKNENIHGSAKWAEESE 102 Query: 159 VARMLK---KDGKDSDIRIGD-------LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANY 208 + +M K K + +G L ++ ++ +GK + + Sbjct: 103 LQQMGLAPPKGKKGEGVIVGGFRNKKGQLQYLKHDGPEHVIGIAPTRSGKGVGL--VVPT 160 Query: 209 ARQRGDMVVIYDRSGEFV------KSYYDPSIDKILNPL-DARCAAWDLWKECL-----T 256 +I D GE +S Y +I +P A+++ E Sbjct: 161 LLSWKHSAIISDMKGELWLMTSGWRSKYANNICIKFDPAATEGSASFNPLGEIRLGTKYE 220 Query: 257 QPDFDNTANTLI-PMGTKEDPFWQGSGRTIF-AEAAYLMRNDPNRSYS------------ 302 D N L+ P G + W + ++ A Y + + ++ Sbjct: 221 ISDTQNMVTILVDPEGKGLEDHWSKTSHSLLTAVVLYTLHHVKEKTLQIEDKKEKYRIAS 280 Query: 303 --KLVDTLLSIK--IEKL-RTYLRNS------------PAANLVEEKIEKT----AISIR 341 + TL + ++ L L + P V + ++ T S Sbjct: 281 LGDVAHTLSNPDQPLDDLWNAMLYQTYGRDRNDQPCTHPVMAAVAKDMQNTPEDERGSTI 340 Query: 342 AVLTNYVKAIR-YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 + +++ R + + FT+ D M + + L++ LKP+I + Sbjct: 341 STARSFLTLYRDPIVEANTSETDFTVGDLM----DHENPVSLYLVVRPGDKDRLKPLIRL 396 Query: 401 WLSIAIRGLL----------AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 L++ +R L+ + R+ DE P +L + LP +G Sbjct: 397 MLTLILRVLVKDGMELDESGSAKAAHKHRLLMMLDEFPGFGRLKVFEDTLPYIAGYGIKA 456 Query: 451 VFGIQSYAQLE--DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 Q QL D YG + ++ + R + + A++ + G K + Sbjct: 457 YLIAQDIEQLRASDAYGRE--ETISANCHVRVVYAPNKIETADWISKLSGTKTGHEEQIS 514 Query: 509 YSYGADPVRDG-VSTGKDMERQTLVSYSDIQSLP-------------DLTCYVTLPGPYP 554 S G V+ + L++ ++ L V + G P Sbjct: 515 TSGARFGAVTGHVNKSIHAFARPLLTPDEVLRLKAPKKSTDGKKIVESGDMLVFVAGNNP 574 Query: 555 A 555 Sbjct: 575 V 575 >UniRef50_B7RP33 TraG/TraD family protein n=2 Tax=Roseobacter sp. GAI101 RepID=B7RP33_9RHOB Length = 604 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 68/425 (16%), Positives = 133/425 (31%), Gaps = 54/425 (12%) Query: 186 QNFCLHGTVGAGK--SEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDK------- 236 ++ +GK S +I L Y ++ D GE + D Sbjct: 180 RHLLTSAPTRSGKGVSHIIINLLCY----QGSALVIDPKGENARITTDEREALGQEVMCV 235 Query: 237 ---------------ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGS 281 +NPLD W + + A++L+ +K D FWQ Sbjct: 236 DPWGIATDAMGRVSARINPLD-----WIKLGDVDATENAMLLADSLVQKNSKSDAFWQEE 290 Query: 282 GRTIFAEAAYLM---RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAA--NLVEEKIEKT 336 + + + R V LL + + + A+ +L+ ++ Sbjct: 291 AKALIQGLILFVCFDAAFDGRRNLGTVRDLLLLSGDDMIAMFEQMAASPHHLIASTGARS 350 Query: 337 AISIRAVLTNYVKAIR---YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 ++ N + + + ++ E + D+ + +K +F+ AD + Sbjct: 351 LQKEPKLMANVLASAQAETHMLDSARVRECLSESDFDFADLK-RKPMTIFLILPADRLET 409 Query: 394 LKPVISMWLSIAIRGLL-AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 + + + AI + + + V F DE+P L +L + + FG Sbjct: 410 FSRFLRLLVQQAITINARNIADKPKKPVLFILDEMPALGRLTMVEQAYGLMAGFGIQLWG 469 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 Q QL IYG+ S A+F SP AE+ + G S + Sbjct: 470 ITQDLCQLRRIYGQDY-ESFIANSGAVAYFGSPDKTSAEYFSAMCGVTTVWNFSSAIATA 528 Query: 513 ----------ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 + + + ++ L ++ L D + + P + LK+ Sbjct: 529 FSSSSGGNGGSSSRSSTTTDNRAATQRKLAYPDELMRLRDDQQLILIENTNPIMARKLKW 588 Query: 563 QTRPK 567 P Sbjct: 589 YEMPD 593 >UniRef50_Q0GU00 TraG n=1 Tax=Lactococcus lactis RepID=Q0GU00_9LACT Length = 611 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 79/490 (16%), Positives = 155/490 (31%), Gaps = 68/490 (13%) Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVIYDRSGEF---VKSYY 230 +P + +N L GAGK+E+ + + V+ D G+ Sbjct: 137 HSMPF-KYQRNKNILLIAGAGAGKTEMFVKPNLSQLHS---SYVVTDPKGKLLHETGKMM 192 Query: 231 DPSIDKI--LNPLD-ARCAAWDLWKECLTQPDFDNTANTLI-----PMGTKEDPFWQGSG 282 I N D + ++ +K + +I K +PFW S Sbjct: 193 AEHGYTIKCFNVNDFSNSNKFNPFKYIRDEVTLKRVIQCIIDATNGENSKKGEPFWDKSE 252 Query: 283 RTIFA----EAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAA------------ 326 + + Y +++ R+ K ++ ++ L L + Sbjct: 253 ELLLSSLFSMLYYNYKDEVERNPDKEIELPKLYEVSDLIRLLNRTDEETPSPLELAFEEF 312 Query: 327 --------------NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH--NGEPFTIRDWM 370 N + KT S+ A+ T L+ I + + I W+ Sbjct: 313 EEDFGSDNYAVTQFNSFKNYKGKTRSSVLAIATARFSMF-DLKDIREVLDDDELDIDSWI 371 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA-----MGENRNRRVWFFCD 425 K +++ D + + +M +A R L +N V F D Sbjct: 372 ------DKKTIVYLPI-PDMDTTFNFLTTMIFVLAFRTLEYKIDNIPPKNEYLHVRFILD 424 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF-RS 484 E L K+P++ E L R +Q+ QL +Y + S +T + S Sbjct: 425 EFANLGKIPNIKEALAVFRSREMSVNIILQNLNQLRALY-KDDWQSFVGNCDTIMYLSGS 483 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 + +F + G++ + + G S D+ + L++ ++ LP Sbjct: 484 TEPETEKFFSERAGKETIDMRKQTENRGGQG---SYSINHDVLGRDLITKDEVNRLPRDE 540 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE 604 C +++ P K K + E+ R N E V + + +L + Sbjct: 541 CLISIS-SMPIYKGKKFKFNGHKRSSEW-SRSSNDENWFDFKPVHKKKIVNVVEEETLKD 598 Query: 605 PDVPEVVSGE 614 + E + + Sbjct: 599 DEYVENIYSQ 608 >UniRef50_A6ASA7 Conjugal transfer protein TraK n=2 Tax=Vibrio harveyi RepID=A6ASA7_VIBHA Length = 592 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 87/550 (15%), Positives = 173/550 (31%), Gaps = 74/550 (13%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARML--- 163 + V+ V++ I L F + I+ Q+ E + TD + + Sbjct: 62 DIKKFLVIGVAVSIAITL--FPTLMAIVIAIASQEKEEIHGSAKFATDMDLANSGLFPDP 119 Query: 164 KKDGKDSDIRIGDLPIIR------DSEIQNFC-LHGTVGAGKSEVIRRLANYARQRGDMV 216 K K I +G +P R + E F + +GK I + D + Sbjct: 120 KAKNKKPSILLGKMPTGRFKGRFIELESSQFVEVPAPTRSGKGVGI--VIPNCVTYPDSL 177 Query: 217 VIYDRSGEFV--KSYYDPSI---DKILNP----LDA--------RCAAWDLWKECLTQPD 259 V D E + + + P +D R W+ + P Sbjct: 178 VCVDIKFENLVKSGGFRQQCGQAVFLFAPDGYAIDEQAREREELRTHQWNPYDYVRRSPV 237 Query: 260 FD-----NTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS--YSKLVDTLLSIK 312 F N AN+L P+ + W +F + M + + + L L Sbjct: 238 FRVSDVLNIANSLYPISGDKGDIWNELAGKLFKGLSCWMLDTESITGITPSLPYVLKLGG 297 Query: 313 IEK-LRTYLRNSPAANLVEEKI-----------EKTAISIRAVLTNYVKAIRYLQGIEH- 359 I+ LR ++R + V + E+T S+ + L + + Sbjct: 298 IDGGLRAWMRREIKNDYVSDDARFEFNNCLSMAEETYSSVESNLLSPLAIFSDRVTAAAV 357 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR 419 +G F R+ +K +++ + + +++ I + Sbjct: 358 SGSDFDFREL------RKKRMTIYVGCQPANLKNFGKLFNLFFEQLISENTRTLPEHDDT 411 Query: 420 VWF----FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 + + DE L ++ + + + + ++ Q QLE++YG + A ++ Sbjct: 412 LKYQCLGLLDEFTALGRVKQIEKAISYTAGYNLRFLTIYQDEGQLEEVYGRENAKNIRKN 471 Query: 476 MNTRAFFRSPSHKIA-EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 + + + +G K K S G R +T +D ++ L+ Sbjct: 472 HGVKVVYPPKEVDDNVRRLSDTLGTKTVKKRKVSRSTGKGSSR---TTSEDELKRALMMP 528 Query: 535 SDIQSLPDLTCYVTLPGPYPAVK-LSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAARE 593 +I L + +P K L +K + FI I E + + E Sbjct: 529 HEIVEL----GF----EKHPIAKELGIKTLILKENQRPFIAEKIIYFEEPVFAERVKYSE 580 Query: 594 AEGRQMASLF 603 A ++ L Sbjct: 581 ANIPEIPRLK 590 >UniRef50_C5A9B0 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9B0_BURGB Length = 1011 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 105/709 (14%), Positives = 220/709 (31%), Gaps = 126/709 (17%) Query: 30 LYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPV-------YEIQ 82 L + ++G V W V + WW + G + P+ +E Sbjct: 24 LIGSAVVGGAVIGTVAW-------AVAMGVEWWVASKTGALGGVSHMPLSKHALYWFETF 76 Query: 83 YYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQS 142 + + A + + +Q+ + A + + V ++I + + Sbjct: 77 LHREMRNRPFADNVAA--YQYGLDQMNWWLIKGK--AALATVPGLGVAAYITVKMNRVYC 132 Query: 143 ENEVTGGRQLTDNPKDVA----RMLKKDGKDSDIRIGDLPI-------IRDSEIQNFCLH 191 + G Q D V +L+ +G + LP+ + + + + Sbjct: 133 NSRHLSGMQFHDGKDAVKLAEQAVLELNGDQAPF----LPLHPELTWLSQQAWSTSAIIM 188 Query: 192 GTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV-------KSYYDPSIDK-ILNPLDA 243 G GAGKS ++ L A + +VI D G K S + ++P Sbjct: 189 GAAGAGKSAILAHLTYEAMVQNVFMVIMDAKGTQSHVIQTINKKLGRSSENVATISPFSD 248 Query: 244 RCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM---------- 293 R AAWD+ ++ + + D AN +P +DP W R I + Sbjct: 249 RDAAWDIGRDLVREEDATVFANAYVPAS--KDPMWSEGARGILRAIVLALIVEYRVACAR 306 Query: 294 -----RNDPNRS-YSKLVDTLLSIKIEKLRTYLRNSPA-ANLVEEKI-EKTAISIRAVLT 345 P + L ++S + + P A L+ + T S Sbjct: 307 AEALGVEKPKPWHWGHLSFRIMSAMKDIYAWAAEHDPGTAQLIADYEKSNTVKSFEVTFR 366 Query: 346 NYVKAIRYLQGIEHNG-------EPFTIRDWMRGVREDQKNG--WLFISSNADTHASLKP 396 + + I L ++R ++ V + G + + +N + + K Sbjct: 367 TFCQDIHKLGKAWGEPAEGQPKRRRVSLRLFVDRVERKGRKGVHQIVLRNNLEYKSLTKG 426 Query: 397 VISMWLSIAIRGLLAMGENRN----RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 + + +L++ +N R + F DE + K + + L R G +V Sbjct: 427 YLLAMHAFLTAKMLSLNDNPTDGTGRTLLFMEDEFTSQGKKESIFDALELGRSKGMVHVI 486 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 +Q+ L ++YG++ + + R+ + ++ A ++ Sbjct: 487 AVQTEDALIELYGQEGRGRISGNTTIKILGRAAAPEMGAQMAANFPKRTVQVTHPGRPAA 546 Query: 513 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 P + + P + PE Sbjct: 547 KGQ--------------------------------------PETPTTYESVEVPVIRPEV 568 Query: 573 IP--RDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS--- 627 + RD+ + + L A +A R A L+ P + + + ++ P++ Sbjct: 569 LSSTRDMGKQRASWLGRRPAGIKAVVRIGADLYHLLWPFIEKDKMPSASDASTPPLAAWL 628 Query: 628 -----PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGE 671 PA++D K V ++ + ++PP + + Sbjct: 629 VGGKVPALSDYKPMVQVE----KLKLDRDAAAAAAATAEIPPATTSTAP 673 >UniRef50_Q5CZF0 Putative plasmid transfer protein n=7 Tax=Bacteroides RepID=Q5CZF0_BACFN Length = 651 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 75/428 (17%), Positives = 140/428 (32%), Gaps = 51/428 (11%) Query: 186 QNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSG------EFVKSYYDPSIDKIL 238 + + GT G+GKS VI +G V+YD + + + KI Sbjct: 196 RGTFVIGTPGSGKSFSVINSFIRQHSAKGFAEVVYDFKFPELAKIAYYNYQKNKQLGKIP 255 Query: 239 NPLDARCAAWD----------LWKE-CLTQPDFDNTANTLIPM-------GTKEDPFWQG 280 N + L +E D TA L F++ Sbjct: 256 NNFKFNVINFSDIEYSRRINPLKREYIEILADATETAEALYESLQKGDKGSGGNSDFFKT 315 Query: 281 SGRTIFAEAAYLMRNDPNRSYSKLVDTL--LSIKIEKL-RTYLRNSPAANLVEEKIEKTA 337 S + A + Y N YS L L L+ + + L + +LV Sbjct: 316 SAVNLLAASIYFWSRYENGKYSDLPHVLAFLNQEYDVLFKVLFSEPELKSLVSPFEAAYK 375 Query: 338 ISIRAVLTNYVKAIRYLQGIEHNGEPF---TIRDWMRGVREDQKNGWLFISSNADTHASL 394 L + +++ E F + D+ V + +L I++N T + Sbjct: 376 SGAVDQLEGQMASLKVQLSRLATKESFWVFSGNDFNLKVSDKTDPSYLIIANNPKTQSMN 435 Query: 395 KPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 + ++ ++ R + N DE PTL+ L +L AR G+ Sbjct: 436 SALNALIINRLTRLV---NTKGNYPTSIIVDECPTLY-FYQLATLLSTARSNKVSICLGL 491 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD 514 Q QLE+ YG+ A ++ ++ ++ + + ++ G+ + +K G Sbjct: 492 QELPQLEEQYGKATAKTITSIIGNTLSGQAKAPETLDWLQKLFGKVKQVKE------GVT 545 Query: 515 PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP------GPYPAV----KLSLKYQT 564 R+ + + + ++ S I SL T + +P K +L + Sbjct: 546 IRRNETTINMNEQMDFVIPASKISSLQAGTLVGQVALDFGQEDNFPTATYHCKTNLDLKK 605 Query: 565 RPKVAPEF 572 K + Sbjct: 606 IKKEEEAY 613 >UniRef50_C6LA24 TraG/TraD family protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA24_9FIRM Length = 680 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 83/513 (16%), Positives = 177/513 (34%), Gaps = 52/513 (10%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 + D + L ++ +CL+ + V + G + Sbjct: 39 VRDLLVQALRSPLPVRITELTGKSVAVCLLVWGVGYIYYLASVGNYMPGKEYGTSRFIPA 98 Query: 156 PKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNF----CLHGTVGAGKSEVIRRLANYARQ 211 ARM+ + ++ +I + + +NF + G GAGKS + Q Sbjct: 99 SGISARMMDRKHPQNN-KILSEHLRISTAARNFNNNCLVIGGSGAGKS--FYVVKPNILQ 155 Query: 212 RGDMVVIYDRSGE-------FVKSYYDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNT 263 +V+ D GE ++++ ++LN +D A+ ++ ++ + D Sbjct: 156 CNASLVVTDPKGECLRDCGGYLEA--QGYRIRVLNLIDFAKSDHFNPFEYIRSDNDIIRL 213 Query: 264 ANTLIPMGT-----KEDPFWQGSGRTIFAEAAYL-MRNDPNRSYSKLVDTLLSIKIEK-- 315 I T + DP W+ + + Y P + + ++ +K + Sbjct: 214 ITNFIANTTPKQSMQSDPMWERAEGLLLQALMYYEWYEGPKQGRKPSIRGVMDLKNKAKV 273 Query: 316 ------------LRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH---- 359 LR PA E + +IR+VL + + L E Sbjct: 274 NDDGSPSETDILLRALPEEHPARIAYENVMAGAGDTIRSVLISLNARMALLNNPEILRIL 333 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR- 418 + + I GV E+ D S ++ M+ ++ + L + +++ Sbjct: 334 DSDDMDIAALGEGVYENPARKTAIFCVIPDNDKSYNFLVGMFYTLMFQELERIADHKYHG 393 Query: 419 ----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 V F+ +E + D +L R +Q+ AQL+ ++ + A ++ Sbjct: 394 TLPVPVAFWMEEFANVALPEDFCTVLSTMRSRNMSANIIVQNIAQLKVLF-KDAWENVTG 452 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 +T + ++ + +G++ K + + G S D+ + L+ Sbjct: 453 NCDTMVYLGGNEQGSHKYVSESMGKRTIGKRATGETRGEHG---NSSRNYDVLGRELLDA 509 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 ++++ L + C V + G P L KY+T K Sbjct: 510 AEVRKLDEKKCIVMIKGRDPV--LDEKYRTWEK 540 >UniRef50_B1Y1V4 TRAG family protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1V4_LEPCP Length = 677 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 81/463 (17%), Positives = 149/463 (32%), Gaps = 56/463 (12%) Query: 188 FCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKI--LNP 240 L +GK VI L N+ D VV+ D GE + S ++ P Sbjct: 155 VMLSAPTRSGKGVGVVIPNLLNWP----DSVVVLDIKGENHAVTAGFRAKSGQRVYAFAP 210 Query: 241 LD--ARCAAWDLWKECLTQP-----DFDNTANTLIP---MGTKEDPFWQGSGRTIFAEAA 290 D AR W+ T P D P GT + F+ R +F Sbjct: 211 FDDQARSHRWNPLTAVRTSPMHRVGDLLAIGQVFYPNDGSGTSSEAFFNDQARNLFLGLG 270 Query: 291 YLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK---------------- 332 L+ P R+ +L+ S K LR +L + ++ K Sbjct: 271 LLLLETPALPRTIGELLRQ-SSGKGRALRDHLADQIRGRRIDSKELGPALSDECIDALQR 329 Query: 333 ----IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNA 388 E T SI A + + D+ Q+ +++ Sbjct: 330 LLSNSENTLSSIVATFNAPLTIFADAVVDATT----SADDFRFEDVRRQRLS-IYVHIPP 384 Query: 389 DTHASLKPVISMWLSIAIRGLLAMGENRNRRV----WFFCDELPTLHKLPDLVEILPEAR 444 + S +P+++++ S + + + DE T+ ++ + Sbjct: 385 NRLTSARPLLNLFFSQLVSLNTQQLPEHDPSLTVQCLLVNDEFTTMGRVGVITMSAAFLA 444 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 + + +Q+ +QL+ +YG+K A + + F + A+ + +G Sbjct: 445 GYNLRLLTVVQAMSQLDAVYGDKEARTFATNHGLQILFAPREQRDADEYSAMLGHFTERG 504 Query: 505 ASEQYSYGADP-VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 S +S P VS + +R+ L+ + + L V P + ++Y Sbjct: 505 TSRGHSRSLGPNGSRSVSVNESEQRRALLLPQEFKELGSERLVVIAENCKPVLGEKIRYH 564 Query: 564 TRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPD 606 P +P P ++ L LA + R + PD Sbjct: 565 RDPAFTSRLLPPPEVPALDMDLH--LARVQQRWRLVEGDLAPD 605 >UniRef50_Q5EK30 Putative uncharacterized protein n=1 Tax=Vibrio cholerae RepID=Q5EK30_VIBCH Length = 595 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 65/413 (15%), Positives = 130/413 (31%), Gaps = 58/413 (14%) Query: 189 CLHGTVGAGKSEVI-RRLANYARQRGDMVVIYDRSGEF--VKSYYDP--SIDKI-LNPLD 242 C+ G G GK+ + +L +A + + D E + + I NP + Sbjct: 137 CIIGPPGTGKTAFLVNQLLAWA-ETKRSFICLDIKPEIYGITRHSLESIGYKVIAFNPTE 195 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR-NDPNRSY 301 + ++ + + + +I +E+ + S R + ++ P+ S Sbjct: 196 SGTWRYNPLDDLDSIEAIGELVSNMIANSGEENAVFFESARDLLDAMINHLKAEKPSVSL 255 Query: 302 SKLVDTLLSIK-IEKLRTYLRNSPAA---------NLVEEKIEKTAISIRAVLTNYVKAI 351 + D L + ++L LR S A +V K E+ SI A + +K + Sbjct: 256 PDVRDFLTTFDSPDELLDALRASKDAQAREIAAELRMVA-KNERLFGSILASMRAGMKFL 314 Query: 352 RYLQ-GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 RY + F++++ ++ +F+ L+ + ++ + +R L+ Sbjct: 315 RYPAIKAALSESDFSLKE-----LGGEQPVAIFLQFEESKSELLQRLTAVIIGHFMRYLI 369 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL----EDIYGE 466 V DE+ + L E L R QS AQ+ + G Sbjct: 370 D--HTNRSPVLLLLDEIGNAKGINGLTEKLNTIRSRNLPVWMYWQSVAQMTLYSDKATGA 427 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE------------------- 507 + + FR AE+ + IG + Sbjct: 428 DGRELIMGACDFVGVFRLNDKATAEYVSETIGTVNRVVRQTSFGTSSSSSNGSSSSSSSG 487 Query: 508 -----QYSYGADPVRDGVST---GKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 S G ST + ++ + +V ++ L D G Sbjct: 488 DGINASASGGNSYTNSDSSTFNESRTLQEEAVVKPHQLRELNDGEMVAWYRGE 540 >UniRef50_Q1IH60 CDS5 n=1 Tax=Mycoplasma agalactiae RepID=Q1IH60_MYCAA Length = 670 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 84/522 (16%), Positives = 177/522 (33%), Gaps = 98/522 (18%) Query: 187 NFCLHGTVGAGKSE--VIRRLANYARQR-GDMV--VIYDRSGEFVKS------------- 228 N + G VG+GK++ ++ + + R VI D E +K+ Sbjct: 150 NSVVIGGVGSGKTQRVILPNILYNSHLRPKYKASFVITDPKKEIIKAVGKKLSDQNYKIF 209 Query: 229 ---YYDPSIDKILNPL------------DARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 + +P NPL D + +++ + +N L P Sbjct: 210 AIDFSEPEYSNGWNPLYYVYKQAHLEYSDQKAYIENIY---KAFSEINNVIEQL-PWSDT 265 Query: 274 EDPFWQGSGRTIFAEAAYLM----------------------------RNDPNRSYSKLV 305 ++ FW + + + A + D N+ + +V Sbjct: 266 DEKFWTDNAKRVINTATKFLLLVSLERPDLVSAQDFNLISVGKLCVAPAWDANQDWISIV 325 Query: 306 DTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI---RYLQGIEHNGE 362 + + A L E K +T SI + +++ + ++Q + + Sbjct: 326 KLKADEDLIWKELWFE--VEALLSEAKNAQTFQSILSFVSSALAIFTNDEFVQRVIAQTK 383 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA----------- 411 F + + ++++ +FI D S +ISM + + L++ Sbjct: 384 SF----DLSLIAKEKQPVAIFIHY-PDHKPSHHFLISMLIDQIYQALVSQANENGKRKDE 438 Query: 412 ----MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 + E +R+ F DE L K+ +L + +R + F +Q Y QL+ + Sbjct: 439 YGIYLSEKLDRKWLFLLDEAGNLPKIINLDNKVTISRSRNIFFQFVLQDYNQLKKYNDKV 498 Query: 468 AA--ASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 ++ + F S + + +G+KE K S+ SY + T ++ Sbjct: 499 DGVDKTIRSNLQFTYFLNSNDEDTLKELSESLGKKEVKKISKSTSYDSRSKGSTSGTTEN 558 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYP-AVKLSLKYQTRPKVAPEFIPRDINPEMENR 584 +E + L+S S+I+S +++ G P +K L Y+ ++ E + Sbjct: 559 IEEKPLMSVSEIKSKNKDLAIISIIGYKPMLIKTKLAYKHFTNDN--YV--HQCDETSSE 614 Query: 585 LSAVLAAREAEGRQMASLFEPDVP-EVVSGEDVTQAEQPQQP 625 ++ + S+ E E + E + Q+ Sbjct: 615 ITKWSLSNLTNSEAQDSVSEEIEQSEDIDRETEINEKVRQEN 656 >UniRef50_B6JK53 Trag protein n=2 Tax=Bradyrhizobiaceae RepID=B6JK53_OLICO Length = 718 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 74/551 (13%), Positives = 165/551 (29%), Gaps = 78/551 (14%) Query: 109 WSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK 168 A + A A + I + + + + G + + + L Sbjct: 81 LEALIRAGYAAATVGAIGLAGALFAVINRRQMPY-----GAARFGTLMEAAKQGLTAKRG 135 Query: 169 DSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS 228 + + D E + + G +GK + V +D E ++ Sbjct: 136 IVLGTLSGATLRSD-EPAHILVVGPSRSGKGTGF--VLPNGYLWQGSAVFFDPKRENFEA 192 Query: 229 -------------YYDPSIDK--ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 + P + NPLD + ++ D A+ +IP K Sbjct: 193 LAEHRAAMGNKVFMFSPGSNDTHRYNPLDF------VRRDERMATDCLVVASFVIPE--K 244 Query: 274 EDPFWQGSGRTIFAEAAYLMRNDP-----------------NRSYSKLVDTLLSIKIEKL 316 D W G+GR + + + P + S ++ ++ + + L Sbjct: 245 ADDTWAGAGRLLLSALIGYVLASPLIAGAQHMRTVARMTTTGKDISSVLRAIVKTERQHL 304 Query: 317 RTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY-LQGIEHNGEPFTIRDWMRGVRE 375 ++ +S + E +T S + + L F IR+ R Sbjct: 305 PAWVVDSFNQYIALEP--ETRNSAVFNVNMAMSLWNNGLISAATETSDFDIRELRR---- 358 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIA--IRGLLAMGENRNRRVWFFCDELPTLHKL 433 + +FI + +P+I + + + G++ +V DE + ++ Sbjct: 359 --RPMTIFIGCTIAELSIFRPLIRILFQQIHDLMMVKIPGDDEPHQVLLMLDEFYHVGRM 416 Query: 434 PDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFA 493 L+ + + +G +Q AQL+++YG + + F + + ++F Sbjct: 417 DSLISKITISAGYGFRMAIVMQDIAQLDELYGRNTRITTVSGSQIKLFIQINDLETSDFV 476 Query: 494 AGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY 553 + +GE + + G V + L S +++ + + + Sbjct: 477 SEMLGETTQVYKTPIQRPGQGIFAPRV-WAPHYTPRPLRSPLELREMSARLSILMV---- 531 Query: 554 PAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSG 613 K + F I ++ A + + L E + G Sbjct: 532 -------------KNSRSFELTKIRHYLDKPYRAYYERAKGSSPALPKLRTWQ-DEALRG 577 Query: 614 EDVTQAEQPQQ 624 + PQ+ Sbjct: 578 AINPAPDTPQE 588 >UniRef50_A6Q5N4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5N4_NITSB Length = 571 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 75/440 (17%), Positives = 147/440 (33%), Gaps = 58/440 (13%) Query: 159 VARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI 218 + ++L + D + D + + G++G GK+E + + +VI Sbjct: 127 LNKILANRAEKQDR-----HMSWDMLKKGSLILGSMGQGKTEFLNNIIVQWIDTNRKMVI 181 Query: 219 YDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKE----CLTQPDFDNTANTLIPM-GTK 273 +D GEF YY D I+N LD R WD +++ + + I + G K Sbjct: 182 HDTKGEFTSWYYRKGKDYIINHLDRRGVYWDFFEDNEKGLPYPLISEFFQSYFIAVAGDK 241 Query: 274 EDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI 333 D FWQ F E ++ + + ++ L +L YL + + Sbjct: 242 GDKFWQEMAGKRFKEVFEELKLQNDVPSHEKMEILAK----ELLAYL------SYAKASG 291 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 KT SI + L + + N R + ++ +F+ + A Sbjct: 292 NKTEQSIASTLEASLDIFLKFAYMAKNER----RKILLTEFFKSEDSRIFLHTIAVGEKD 347 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVW--FFCDELPTLH-KL-PDLVEIL-PEARKFGG 448 P I+ +L++ +R L + + W + DE T K+ D+ + +AR +G Sbjct: 348 NAPFITAFLTVMMRYQLTYFDKAPKEQWILYVLDEYLTFFEKMSEDIRRSVHTKARSYGM 407 Query: 449 CYVFGIQ---SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 + +Q S +L+++ L + F + + G+ + Sbjct: 408 LLLPALQYLPSDEKLKEV--------LTGSIENMWIFAGTNSDTNDEIKKMTGKVQINDV 459 Query: 506 SEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS-LPDLTCYVTLP----------GPYP 554 S++ D +++ + +I + P Sbjct: 460 SKKKD-------DKYDETLYTQKEHYLLSDNILKEMEPGEHISFFPKKSVIYFGYTEQVE 512 Query: 555 AVKLSLKYQTRPKVAPEFIP 574 +S Y K FI Sbjct: 513 VKPISKDYIEEKKEENSFIQ 532 >UniRef50_A8LU08 TraG family protein/type IV secretion system protein VirD4 n=19 Tax=Alphaproteobacteria RepID=A8LU08_DINSH Length = 666 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 77/490 (15%), Positives = 144/490 (29%), Gaps = 30/490 (6%) Query: 187 NFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKI--LN 239 + + G GK+ VI L + V D GE + DK+ Sbjct: 135 HALIVAPTGRGKTTGFVIPNLLTW----QGSAVTLDVKGECFEATARHRAAQGDKVYRFA 190 Query: 240 PLD---ARCAAWDLWKEC-------LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEA 289 P D R ++ Q + A + G +F A Sbjct: 191 PTDWESKRTHRYNPLLRIYQLKDPARQQMELQLLATLFLQSDNDRVQGLLKGGIDLFVAA 250 Query: 290 AYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI-EKTAISIRAVLTNYV 348 L + ++ S ++ + R N + I + A + LT+YV Sbjct: 251 GLLAFQRKRPTLGEIYRIAASGGNKQKEYFARGHEVENRAAKLIFTRLASTNNDTLTSYV 310 Query: 349 KAIRYLQ----GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 + E + D+ +K +++ L P+I ++ S Sbjct: 311 SLLMTSGLDQWQNPAIDEATAVSDFDFRTIR-KKPFSVYLVVQPLMVKPLAPLIRLFFSD 369 Query: 405 AIRGLLAMGENRNRR--VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 + + + V DE L K+P +VE + R + G Q+ L++ Sbjct: 370 LLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVVTQTIPALDE 429 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 IYGE +L + + K E + +G+ + S G +P +G S Sbjct: 430 IYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVVTRSQSIGKNPF-EGRSQ 488 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEME 582 E +L+ + + LP + + P ++Y + Sbjct: 489 STRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAAQTGELPFP 548 Query: 583 NRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVP 642 + + + P S DV +A + +D V Sbjct: 549 EPGGGGPQGNLSLSMRAMPMTPPPDGPRGSEADVERAREVVDGQPSGQSDVVPKKTTPVV 608 Query: 643 AGGIEQELKM 652 I +E + Sbjct: 609 QAVIAEEQRQ 618 >UniRef50_A3VQZ2 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQZ2_9PROT Length = 612 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 63/422 (14%), Positives = 127/422 (30%), Gaps = 60/422 (14%) Query: 186 QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY-----YDPSIDKILNP 240 ++ + G+GKS + D G + + +L+P Sbjct: 116 RHMMMIAGTGSGKSVFLASQLA-VLNSSTSAFAIDPKGTLATTILPSQVRNGRTAHVLDP 174 Query: 241 LD---ARCAAWDLWKECL----------TQPDFDNTANTLIPMGTKEDPFWQGSGRTIFA 287 L + A+WD E + + D A + E PFW S R I++ Sbjct: 175 LRITKQQSASWDPLHELVALNARIGEDVSTLYLDKIAEACVEKHPSEKPFWPESARLIWS 234 Query: 288 EAAY--LMRNDPNRSYSKLVDTLLSIKIEKLRT------------YLRNSPAANLVEEKI 333 L R L+S+ +L N + V + Sbjct: 235 SILGHVLTTEPSERRNIVRARELVSVGYRELSDDPQEALDFLWIAMRDNPAFSGHVAKGG 294 Query: 334 EKTAIS-------IRAVLTNYVKAIRYLQ-GIEHNGEPFTIRDWMRGVREDQKNGWLFIS 385 + + A L K + + Q F + D + + + ++ Sbjct: 295 AFMLGASANGADDVLATLRAATKFLDHPQVRAISRNSTFNLCD-----LKGGADWVVCVA 349 Query: 386 SNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARK 445 + +L+P + A+ G + F DE+P+L +PD+ L R Sbjct: 350 PTTEIRGALRPWFRLLTMSALYGFEMIPGGLENPSLFAIDEMPSLGNMPDVEAALAVMRG 409 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 +G ++ Q L+ Y + AS + + A+F + ++G+ + Sbjct: 410 YGVRFLGVAQDIGNLKQAY-PTSWASFIGNADAVFWMGVNHPSTADFLSQQLGKATRKE- 467 Query: 506 SEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL---PDLTCYVTLPGPYPAVKLSLKY 562 G + + + + +++ ++ VT G P + Y Sbjct: 468 ---------KTGRGKNKHQFVNEREVMTPDQVRRFLNPKRGNMIVTRFGERPIRARLMPY 518 Query: 563 QT 564 Sbjct: 519 YK 520 >UniRef50_A6NS31 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS31_9BACE Length = 427 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 131/356 (36%), Gaps = 42/356 (11%) Query: 189 CLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY--YDPSI-----DKILNPL 241 + G GAGK+ + Q +V+ D G + + Y S + L Sbjct: 29 LIIGPSGAGKTRG--YVIPNILQAEGSLVVTDTKGNLCRQFRPYLESRGYQVMELNFARL 86 Query: 242 DARCAAWDLWKECL--------TQPDFDNTANTLIPMGTKEDPFWQGSGRTIF-AEAAYL 292 D ++ +Q D + +N + P+ T++DPFW S + A Y+ Sbjct: 87 DENAWGYNPLAAIRFDREQGEYSQQDIISLSNIIAPVLTRDDPFWDQSAQIYLQALVGYV 146 Query: 293 MRNDPNR-----SYSKLVDTLLSIKIEKL-RTYLRNSP--------AANLVEEKIEKTAI 338 + P R S +L + S+ ++++ R P + L +T Sbjct: 147 LECLPERERNLNSVCRLGGLIGSVTLDQMFRELGELKPDCFAVSRYRSMLTTRSASRTDA 206 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 IRA L ++ + Y F+ R + + +F++ + ++ + ++ Sbjct: 207 CIRAFLDRHLLPLSY----SGVSRMFSNRRQVSFESIGTRKTAVFLTVSDTDRSNDR-LV 261 Query: 399 SMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 +++ + A + L+AM + V F D+ T +PD ++ R Sbjct: 262 NLFYAQAFQQLVAMADRCPGSRLPVPVRFILDDFATNTVIPDFDNLISVIRSRELSVSLI 321 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 IQS +QLE +YG + ++ + + + + A+ + + + + Sbjct: 322 IQSLSQLESLYGRTKSQTIVNNCDNWLYLGGLDLQTAQEMSTRLNRTVQSVLNMSH 377 >UniRef50_C7WD59 TraG/TraD family protein n=1 Tax=Enterococcus faecalis JH1 RepID=C7WD59_ENTFA Length = 598 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 125/400 (31%), Gaps = 53/400 (13%) Query: 198 KSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQ 257 K ++ A +Q G + +++ + Y+P R E + Sbjct: 154 KGGILSDTAAIMQQNGYRIKVFNLNTMKNSDGYNPFHYI------RRT-------EGDCE 200 Query: 258 PDFDNTANTLI-----PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLV------- 305 D N L+ P D FW + R+ A +L+ L Sbjct: 201 IDILKVVNNLMKNTSDPNKKGGDSFWDDAQRSFLAAIFHLLILKGKPEEQNLGIVADLVR 260 Query: 306 ---------DTLLSIKI--EKLRTYLRNSPAANL---VEEKIEKTAISIRAVLTNYVKAI 351 + + SI + ++L + AA + KTA SI L + Sbjct: 261 RARVKEDDEEYISSIDLVFQELEQEQPSCFAAKQYQNFKMAAGKTAKSILISLGVRLSPF 320 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 + T D + + L+I DTH ++ + SM L+ Sbjct: 321 DV-----PDIRKLTSTDTLELDTIGDRKTVLYI-ILPDTHTTMNFLASMIYQQLFDTLVY 374 Query: 412 MGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGE 466 +N V DE ++PD ++ R G +Q+ Q+ + Sbjct: 375 KADNVYNGSLPIPVRCLLDEFANTGQIPDFENVIATTRSRGISVDVILQNLTQISKKLYK 434 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 + ++ ++ + ++ + ++G++ + S G + Sbjct: 435 DSWETIIGNCDSFLYLGGNEQSTHKYISTQLGKETIDVVTYNESRGTTG---SFTKNSQK 491 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 + + L+ ++++ + C L G P + K + P Sbjct: 492 QGRNLLDPNEVREIKGGKCIYMLRGTKPFLSDRFKLERHP 531 >UniRef50_C5J6F0 Putative uncharacterized protein MCJ_003530 n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6F0_MYCCR Length = 728 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 98/579 (16%), Positives = 205/579 (35%), Gaps = 98/579 (16%) Query: 88 FRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVT 147 F+ + + + + Y++ Q W A + +++++ L+ ++ + Q + Sbjct: 35 FKYDVSNIFNTYYLLM---QDWKALLWMIMISIIFSLLVSPLIILFFKKN-DQVYSKDFD 90 Query: 148 GGRQLTDNPKDVARMLK---------KDGKDSDIRIGDLPIIRDSEI-------QNFCLH 191 G D K + + K + K + I + + ++I + + Sbjct: 91 GSYMFYDELKKIGSLEKFNNKFLASQNEDKHNPGWIIKIEKAKKNKINYYVVSGMHTVIL 150 Query: 192 GTVGAGKSE--VIRRLANYA----RQRGDMVVIYDRSGEFVKSYYDP----SIDKIL--- 238 G +GK++ +I + +++ D GE V S D IL Sbjct: 151 GDTRSGKTQKFIIPSIKYNINLKNPNSRPNIMVIDPKGELVTSLKDELESNGYKVILFNF 210 Query: 239 ------NPLDARCAAWDLWK-----ECLTQPDFDNTANTLIPM----GTKEDPFWQGSGR 283 + ++ WD + E + ++LI G +E+ FW + + Sbjct: 211 KNLVKSDKINLLAPIWDKFHNKDGTEIENKSAASELLDSLIQSMHDWGKEENSFWVQTAK 270 Query: 284 TIFAEAA--YLMRNDPNRSYSKLVDTLLSIKIEKLRT-YLRNSPAANLVEEKIEK----- 335 I A +L + ++++ K + S + L L+ P + + K Sbjct: 271 DILFAIAWFFLFYSKEDKNFKKE-HFIFSNFNQFLNEKALKEGPWVKIAQNSKSKWMKYF 329 Query: 336 --------------TAISIRAVLTNYVKAI---RYLQGIEHNGEPFTIRDWMRGVREDQK 378 T A L +K +L + F + ++ + Sbjct: 330 YTNLFLPLIDIVPETLSGAIANLNTLMKKFIKPDFLLFSSKHEVDFN--NLIKNSELNYP 387 Query: 379 NGW---LFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR-----VWFFCDELPTL 430 N +FI+ +P IS ++ LL + E+++ R FF DE L Sbjct: 388 NSQPFAVFITFPLYQSRP-EPFISAIINNCYSSLLTIAESKHNRKLDRSFLFFGDEFGNL 446 Query: 431 HKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIA 490 + ++ L A + + +Q+ QLE Y ++ ++ + + F RS K Sbjct: 447 PTIKEMSNKLSTAAGYNIYFSLILQNIEQLEK-YKQEQ-RTILSNSSLKIFLRSNDLKSL 504 Query: 491 EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP 550 E + G+KE +K + V + + ++++ ++ D+ + +V L Sbjct: 505 EIFSKFAGKKETIKTT------YSNVDSKKTNTEAIQKENIIEPWDLSQMLMEETWVLLS 558 Query: 551 GPYPA-VKLSLKYQ--TRPKVAPE--FIPRDINPEMENR 584 G P +K YQ PK+A E + R+ E EN+ Sbjct: 559 GEKPIHIKSDFAYQIWDDPKIALEDLYKEREDLNEWENK 597 >UniRef50_UPI00016C48A6 Agrobacterium virulence virD4-like protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48A6 Length = 527 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 75/396 (18%), Positives = 139/396 (35%), Gaps = 49/396 (12%) Query: 201 VIRRLANYARQRGDMVVIYDRSGEFV----KSYYDPSIDKILNPLDARCAAWDLWK---- 252 ++ L Y R VV++D G+ + LNP A W+ Sbjct: 112 ILPILLEY---RRGSVVVFDTKGDLYQITARRRRRLGPVARLNPF-GTGARWNPLDTIPP 167 Query: 253 -ECLTQPDFDNTANTLIPMGTKE-DPFWQGSGRTIFAEAAYLMR---NDPNRSYSKLVDT 307 + L + + A L+ K DP W G + A L+ +R+ + + +T Sbjct: 168 GDPLLIDNVRSMACGLVVASVKAVDPHWDGKATQLVAAVLTLVAIKFPADSRNLNSVYET 227 Query: 308 L-----LSIKIEKLRTY--LRNSPAANLVEEKIEKTAISIRA--VLTNYVKAIRYLQGIE 358 + L E LR S A L ++ V++ ++ + +L Sbjct: 228 ICDPELLRSAAEALRAMGGFPGSQGAALGSLFDRGGTLTKEGTGVVSTALRHLDFLASPA 287 Query: 359 HNGEPFTI----RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 R+++R G L+++ A+ + ++ +W S L+ + Sbjct: 288 VAASVAASDIDPREFLRA------GGTLYLTIPESQLAAQQGLLRLWTST----LMRIRG 337 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + DE L LP L E L R G + QS AQ++ + EK +FD Sbjct: 338 GADGECLMLLDEASALGALPALEEALVRGRSSGLRLLLAYQSCAQVQAAFPEKPTL-IFD 396 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY-------GADPVRDGVSTGKDME 527 + + + S + AE + +G +S ++ GA G S + Sbjct: 397 NTSAHIYLGAASLETAERISKSLGNFTQAVSSYADNWSRTDPQDGAGSTTWGGSENTSVL 456 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPG-PYPAVKLSLKY 562 + L+ ++ LP + G P P + ++Y Sbjct: 457 GRPLLYPDEVLRLPVDLLIAFVAGLPGPILARRIQY 492 >UniRef50_C7WLP9 TraG/TraD family protein n=7 Tax=Bacteria RepID=C7WLP9_ENTFA Length = 551 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 64/483 (13%), Positives = 146/483 (30%), Gaps = 49/483 (10%) Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK-----SYYDPSIDKILN 239 +N + G G+ K++ L N R +V+ D GE + ++N Sbjct: 32 NRNIFVVGGPGSFKTQS-YVLPNVVNNRSTSIVVTDPKGEIYELTNEIKKAQGFKTVVIN 90 Query: 240 PLDAR-CAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIFAEAAYLMR-- 294 D + ++ D + AN ++ K FW + + + Sbjct: 91 FKDFLLSSRYNPLLYIRKSNDTNKIANVIVSAKNDPKRKDFWFNAQLNLLNTLIKYVYFE 150 Query: 295 -NDPNRSYSKLVDTLLSIKI-----------EKLRTYLRNSPAANLVEEKIEKTAISIRA 342 R+ ++D L E+ A + R Sbjct: 151 YEPSARTIEGILDFLEEFDPRYNEEGVSELDEQFERLPDGHEAKRSYYLGFRQAQSEARP 210 Query: 343 VLTNYVKAIRYLQG-IEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 + + + LQ ++ FT + L++ + + +++++ Sbjct: 211 NI--VISLLTTLQDFVDKEVSEFTSTNDFFFEELGTSKICLYVLISPLDR-TWDGLVNLF 267 Query: 402 LSIAIRGLLAMGENRNR----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSY 457 L +G+ N + DE L P L R + +QS Sbjct: 268 FQQMFTELYFLGDKHNAKLPVPLVMLLDEFVNLGYFPTYENFLATCRGYRISVSTILQSL 327 Query: 458 AQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK----ASEQYSYGA 513 Q ++YG+K ++ + AE+ + ++ + SE + Sbjct: 328 PQGFELYGDKKFKAIIGNHAIKICLGGVEETTAEYFSRQVNDTTIKVYTGGTSESKTSAK 387 Query: 514 DPVRDGV-STGKDMERQTLVSYSDIQSLPDLT----CYVTLPGPYPAVKLSLKY------ 562 R G S +++ L++ ++ +L V + G ++ + ++ Sbjct: 388 TTNRSGSKSESYGYQKRRLITEGEVINLQQEENGRKSIVLIDGKPYMLRKTPQFELFGNL 447 Query: 563 -QTRPKVAPEFI--PRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQA 619 + ++I + E L R+ + E + ++ +++ Sbjct: 448 LKKHEISQQDYISSQTEFAKEYIEELEKQHKQRKVQLASAPIFHEKKQEDDLNKKEINLP 507 Query: 620 EQP 622 EQP Sbjct: 508 EQP 510 >UniRef50_B7ABM1 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7ABM1_THEAQ Length = 814 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 149/443 (33%), Gaps = 38/443 (8%) Query: 155 NPKDVARMLKKDGKDSDIRIGDLPI--IRDSEIQNFCLHGTVGAGKSEVI---RRLANYA 209 KD+A L G ++G P+ + + + G G GK+ L + Sbjct: 126 TEKDLAPYLTPKGAGWYGQVGRRPLRVPEAQRVAHTLVVGKPGHGKTSGYYLPNLLLDA- 184 Query: 210 RQRGDMVVIYDRS----GEFVKS--YYDPSIDKI--LNPLDARCAAWDLWKECLTQPDFD 261 + G ++YD G +++ YY + P R + + Sbjct: 185 -KDGWGAIVYDLKFPDRGGLMEAMAYYAHHGRPVYPFTPWGERSFRINFLEGAEDITQAK 243 Query: 262 NTANTLIPMGTK---EDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRT 318 A +P K F+ G RT+ + + S + + L + L+ Sbjct: 244 LIAEIFVPRNPKVPDSKEFYPGLERTLLQGLIHAEGVEGRYSLAHIYRVLGDG-VAGLKA 302 Query: 319 YLR-----NSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGV 373 Y+ L+E + ++ A + + P + W R Sbjct: 303 YVEVRPYLQVELKTLLEMRQDQLAGILNGARNRLSIWLDPGLAACTEPGPMEV-PWDRFF 361 Query: 374 REDQKNGWLFISSNAD---THASLKPVISMWLSIA-IRGLLAMGENRNR---RVWFFCDE 426 E L+I + +AS ++ + I ++ L G + R + + DE Sbjct: 362 EE---PSLLYIGVPQELIGDNASGYVLLKLLKRIVDLKTLQYAGRHGGRLKVPLSVYWDE 418 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP- 485 P LP + E L R Y +Q+ Q +YG+ ++ R +F S Sbjct: 419 FPNFGFLPGIKENLGTMRSRRVAYHIAVQNTDQGRAVYGDDEWEAIEGTFAQRVYFLSGL 478 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYS-YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 S A + +G+ L+ + S G P G +TG+ + L+S +++ Sbjct: 479 SDNDAARLSEVLGQTTVLQEARGVSRKGVLPFPTGRTTGEREVARPLLSPEEMRMSRKGE 538 Query: 545 CYVTLPGPYPAVKLSLKYQTRPK 567 V L G P ++ L R + Sbjct: 539 AVVLLEG-TPPARIELFGMWRTE 560 >UniRef50_B3Q3U5 Conjugal transfer protein G n=5 Tax=Rhizobium etli RepID=B3Q3U5_RHIE6 Length = 639 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 61/405 (15%), Positives = 132/405 (32%), Gaps = 40/405 (9%) Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF------VKSYYDPSID 235 D + + G K+ + A + ++ D S E +++ Sbjct: 217 DFDSTHMLFFAGSGGYKTT--SNVVPTALRYTGPLICLDPSTEVAPMVVEHRTHALGREV 274 Query: 236 KILNPLDARCAAWDLWKECLT----QPDFDNTANTLIPMG----TKEDPFWQGSGRTIFA 287 +L+P + +++ T + D A+ L+ + ++Q + Sbjct: 275 MVLDPTNP-IMGFNVLDGIETSRQKEEDIVGIAHMLLSESVRFESSTGSYFQSQAHNLLT 333 Query: 288 EAAYLMRNDP---NRSYSKLVDTLLSIK----IEKLRTYLRNS------PAANLVEEKIE 334 + P R + + ++S + LR NS + E Sbjct: 334 GLLAHVMLSPEYAGRRNLRSLREIVSEPEPSVLAMLRDIQENSQSDFIRETLGVFTNMTE 393 Query: 335 KTAISIRAVLTNYVKAIRYLQGIEHN-GEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 +T + + + + + G+ F + G ++ +F++ A S Sbjct: 394 QTFSGVYSTASKDTQWLSLDSYAALVCGKAFKPSHIVSGRKD------VFLNIPASILRS 447 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 + + + I ++ RR F DE+ L + L E RK+G + Sbjct: 448 YPGIGRVIIGSLINAMMQADGAFRRRALFMLDEVDLLGYMRVLEEARDRGRKYGVSMMLM 507 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 QS QLE +G+ A S + ++ + A + + GE + G Sbjct: 508 YQSVGQLERHFGKDGATSWIEGCAFASYAAVKALDTARTVSAQCGEMTVEVKGSSRNLGW 567 Query: 514 DPVRDGVSTGKDM--ERQTLVSYSDI-QSLPDLTCYVTLPGPYPA 555 + G + + +R+ L+ +I QS+ + + G P Sbjct: 568 NSRNGGTRKSESVSFQRRPLIMPHEITQSMRKDEQIIIVQGHSPI 612 >UniRef50_Q48B00 Conjugal transfer protein n=11 Tax=Gammaproteobacteria RepID=Q48B00_PSE14 Length = 550 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 62/412 (15%), Positives = 126/412 (30%), Gaps = 60/412 (14%) Query: 188 FCLHGTVGAGK--SEVIRRLANYARQRGDMVVIYDRSG---EFVKSYYDPSIDKI--LNP 240 L G+ K S VI L +Y D +V+ D + + + K+ +P Sbjct: 44 VMLAAPPGSMKGVSAVIPNLLSYP----DSMVVNDPKFENWDITSGFRASAGHKVCRFSP 99 Query: 241 LDARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN 295 W+ P D A L ++ W +F+ + Sbjct: 100 ERLETHRWNPVSAISRDPLYRLGDIRTLARVLFVSDNPKNQEWYNKAGNVFSSILLYLME 159 Query: 296 DP------------------NRSYSKLVDTLLS-----IKIEKLRTYLRNSPAANLVEEK 332 P ++++ V L S + +E LR A+ Sbjct: 160 TPAMPCTLPQTYEIGSLGTGMGTWAQQVIELRSTGPNALTVETLRELNGVFEASKNKSSG 219 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 T +R VL+ Y + D + + ++ ++ S Sbjct: 220 WSTTVDIVRDVLSVYAEKTVAWAVS---------GDDIDFAKMREEKTTVYFSVTEGNLK 270 Query: 393 SLKPVISMWLSIAIRGLLAMGENRNRR-----------VWFFCDELPTLHKLPDLVEILP 441 P+++++ + AIR + + + DE + ++ + Sbjct: 271 KYGPLMNLFFTQAIRLNSKVIPEQGGNCADGTLRYKYQLALMMDEFAIMGRMEIMETAPA 330 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 R G + Q Q+ IYGE+AA + ++ F K+AE + +G Sbjct: 331 LTRGAGLRFFLIFQGKDQIRAIYGEEAANGIMKAIHNEIVFAPGDIKLAEEYSRRLGNTT 390 Query: 502 HLKASEQYSYGADPVR-DGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 ++ + V G + + + L+ ++ LP + + G Sbjct: 391 VRVHNQSLNRQKHEVGARGQTDSYSEQPRPLMLPQEVNELPFDQQLIFVQGN 442 >UniRef50_B3ESQ2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESQ2_AMOA5 Length = 597 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 78/458 (17%), Positives = 140/458 (30%), Gaps = 73/458 (15%) Query: 177 LPIIRDSEIQNFCLHGTVGAGKSE-VIRRLANYARQRGDMVVIYD--------------- 220 LPI + G G GK++ +I L +G V+YD Sbjct: 152 LPIPNPQ--SGIFIVGEPGCGKTKFLIEPLLAQMIYKGYAGVLYDYDFSPVPSENYSLTH 209 Query: 221 --------------RSGEFVK-SYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTAN 265 F+ ++ D + NP+ + + Sbjct: 210 LSYRALQEFDQKANIKRRFISINFQDLTTSARFNPIHPSY----IEDRKKLSHSINTFLL 265 Query: 266 TLIPMGTKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLRNS 323 L P D FW + + ++ N P + + L ++L L + Sbjct: 266 NLNPKLLAHDDFWNKNTYALLKSLIVMLSNKYPPYCTLPHAI-LLGLQPYKELMKTLESD 324 Query: 324 PAANLVEEK-------IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED 376 A + + + A ++ + + D V + Sbjct: 325 EEAAMYASPILDAYKLAPEQFAGVMASFKITLERLLDKNLFW----VLSGNDIPLIVNDP 380 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDL 436 + + + + + + PV+SM +++ M + + DE+PTL + PDL Sbjct: 381 KNPLVVCLGNTPTEKSVISPVLSMCMAVLGT---NMYAHDRVPSFNKADEIPTLVR-PDL 436 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 E RK+G V +Q+ AQLE Y A L D R S A++ + Sbjct: 437 SEAPATGRKYGISTVIALQNMAQLEKAYTAIGAKELQDTFGNHFIGR-GSLSSAQYISDL 495 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC---YVTLPGPY 553 +G++E S VS + + +++ D +L V G + Sbjct: 496 VGKQEEE------SISTTESDKNVSRTTHQKERVVITPQDTMTLKTGEFMGKIVYPKGGF 549 Query: 554 ------PAVKL--SLKYQTRPKVAPEFIPRDINPEMEN 583 P V L YQ + + DI E Sbjct: 550 FKMQLKPVVAYNKRLGYQYMKPLPTTYEKVDIEANFEA 587 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P22708 Protein traD n=73 Tax=root RepID=TRAD2_ECOLX 712 0.0 UniRef50_B6ICH4 TraD protein n=1 Tax=Escherichia coli SE11 RepID... 534 e-150 UniRef50_C8QEC7 Type IV conjugative transfer system coupling pro... 523 e-147 UniRef50_D1S138 Conjugal transfer protein TraD n=1 Tax=Serratia ... 521 e-146 UniRef50_A4WGU5 Type IV secretory pathway VirD4 components-like ... 507 e-142 UniRef50_B8EFQ3 Type IV conjugative transfer system coupling pro... 505 e-141 UniRef50_B2VB35 TraD protein n=1 Tax=Erwinia tasmaniensis RepID=... 497 e-139 UniRef50_Q5ZTT3 TraD n=1 Tax=Legionella pneumophila subsp. pneum... 483 e-134 UniRef50_A8QYR8 TraD protein n=8 Tax=Gammaproteobacteria RepID=A... 479 e-133 UniRef50_D0Z587 IncF plasmid conjugative transfer protein TraD n... 466 e-129 UniRef50_D2TZY7 Conjugal transfer protein TraD n=1 Tax=Arsenopho... 457 e-127 UniRef50_Q1NH25 TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25... 453 e-126 UniRef50_A1WDH0 TraD n=3 Tax=Burkholderiales RepID=A1WDH0_ACISJ 452 e-125 UniRef50_Q0HXY0 Putative uncharacterized protein n=1 Tax=Shewane... 451 e-125 UniRef50_B2I3X2 Type IV secretory pathway, VirD4 component n=1 T... 448 e-124 UniRef50_B7JCL9 Conjugal transfer protein TraD n=11 Tax=root Rep... 440 e-122 UniRef50_A4XE63 Type IV secretory pathway VirD4 components-like ... 435 e-120 UniRef50_Q2G6A0 Type IV secretory pathway VirD4 components-like ... 434 e-120 UniRef50_A3VMZ9 TraD n=1 Tax=Parvularcula bermudensis HTCC2503 R... 431 e-119 UniRef50_A0B526 Type IV secretory pathway VirD4 components-like ... 430 e-118 UniRef50_B0RKL6 TraD n=2 Tax=Yersinia RepID=B0RKL6_YEREN 427 e-118 UniRef50_Q6MB84 Putative conjugative transfer protein traD n=2 T... 421 e-116 UniRef50_D0SGZ6 Type IV secretory pathway protein n=1 Tax=Acinet... 418 e-115 UniRef50_Q1N8W8 Type IV secretory pathway VirD4 components-like ... 416 e-114 UniRef50_C4Z014 Putative conjugative transfer protein TraD n=1 T... 413 e-114 UniRef50_D1RMM8 Type IV conjugative transfer system coupling pro... 413 e-113 UniRef50_Q3HKI7 TraG n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 406 e-111 UniRef50_C5SIG6 Type IV secretory pathway VirD4 protein-like pro... 389 e-106 UniRef50_C9NPT6 Type IV secretory pathway VirD4 component n=1 Ta... 384 e-105 UniRef50_C9CRW4 TraG n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9... 380 e-103 UniRef50_B5YII5 Putative conjugative transfer protein TraD n=1 T... 371 e-101 UniRef50_A5CC23 Conjugative transfer protein n=48 Tax=cellular o... 370 e-101 UniRef50_A5G187 Type IV secretory pathway VirD4 components-like ... 360 9e-98 UniRef50_B8GZQ6 Bacterial conjugation protein, ATP binding domai... 356 1e-96 UniRef50_C6DZ92 Sigma 54 interacting domain protein n=1 Tax=Geob... 347 6e-94 UniRef50_Q2QCR0 TraJ n=1 Tax=Pseudomonas sp. CT14 RepID=Q2QCR0_9... 339 3e-91 UniRef50_B9MIL1 Putative type IV secretory pathway VirD4 compone... 335 3e-90 UniRef50_Q8R8F9 ATPase involved in conjugal plasmid transfer n=3... 333 2e-89 UniRef50_Q32X91 Probable TrwB n=1 Tax=Xanthomonas axonopodis pv.... 332 2e-89 UniRef50_B4S9K8 TRAG family protein n=1 Tax=Prosthecochloris aes... 330 1e-88 UniRef50_C7HYW0 Putative type IV secretory pathway VirD4 compone... 328 4e-88 UniRef50_A5FU76 Type IV secretory pathway VirD4 components-like ... 328 4e-88 UniRef50_D1ATC0 Type IV secretion system protein VirD4 n=53 Tax=... 327 8e-88 UniRef50_Q04230 TrwB n=5 Tax=Proteobacteria RepID=Q04230_ECOLX 323 1e-86 UniRef50_B2TH73 Type IV secretion system protein VirD4 n=1 Tax=B... 323 2e-86 UniRef50_Q7X127 TrwB n=8 Tax=Gammaproteobacteria RepID=Q7X127_XANCI 322 4e-86 UniRef50_Q3SHV9 Putative type IV secretory pathway VirD4 compone... 319 2e-85 UniRef50_Q2RLJ0 TRAG protein n=1 Tax=Moorella thermoacetica ATCC... 319 4e-85 UniRef50_D0L1A2 TRAG family protein n=4 Tax=Bacteria RepID=D0L1A... 314 7e-84 UniRef50_D1BL71 Type IV secretory pathway VirD4 protein-like pro... 313 1e-83 UniRef50_A9I2I0 Type IV secretion system protein VirD4 n=1 Tax=B... 312 3e-83 UniRef50_B9BFK1 TrwB protein n=1 Tax=Burkholderia multivorans CG... 312 4e-83 UniRef50_A3EW05 Putative plasmid transfer factor (TraG) n=1 Tax=... 310 1e-82 UniRef50_Q3SI88 Putative type IV secretory pathway VirD4 compone... 310 1e-82 UniRef50_C1F4S3 Conserved domain protein n=1 Tax=Acidobacterium ... 308 5e-82 UniRef50_A7HU67 TRAG family protein n=108 Tax=Bacteria RepID=A7H... 307 7e-82 UniRef50_A4XMT9 TRAG family protein n=2 Tax=Caldicellulosiruptor... 307 9e-82 UniRef50_B3ENB4 TRAG family protein n=1 Tax=Chlorobium phaeobact... 305 4e-81 UniRef50_A5V2N2 Type IV secretory pathway VirD4 components-like ... 304 1e-80 UniRef50_B6AM17 Plasmid coupling TrwB n=1 Tax=Leptospirillum sp.... 304 1e-80 UniRef50_B6AM16 Conjugation TrwB n=4 Tax=Leptospirillum sp. Grou... 302 4e-80 UniRef50_Q21BL2 Putative type IV secretory pathway VirD4 compone... 301 5e-80 UniRef50_B1L333 ATPase involved in conjugal plasmid transfer n=3... 299 3e-79 UniRef50_B9MP28 TRAG family protein n=1 Tax=Anaerocellum thermop... 299 3e-79 UniRef50_C1F5K1 Conserved domain protein n=2 Tax=Acidobacterium ... 298 5e-79 UniRef50_C6BT46 TRAG family protein n=1 Tax=Desulfovibrio salexi... 298 6e-79 UniRef50_Q0KKK9 VirD4 type IV secration protein n=1 Tax=Plasmid ... 292 3e-77 UniRef50_C9RCI6 TRAG family protein n=1 Tax=Ammonifex degensii K... 292 5e-77 UniRef50_A5N4W3 Plasmid transfer factor-related protein n=133 Ta... 291 8e-77 UniRef50_Q1JB76 TraG/TraD family n=13 Tax=Bacteria RepID=Q1JB76_... 290 9e-77 UniRef50_Q209N2 Conjugal transfer protein VirD4 n=2 Tax=Aeromona... 290 2e-76 UniRef50_B6ASB1 Conjugal transfer protein, TraB n=2 Tax=Leptospi... 289 4e-76 UniRef50_A5VH50 TRAG family protein n=2 Tax=Alphaproteobacteria ... 288 4e-76 UniRef50_A5EUP0 Putative type IV secretory pathway protein VirD4... 287 1e-75 UniRef50_B5UW87 Protein TrsK n=1 Tax=Bacillus cereus AH1134 RepI... 287 1e-75 UniRef50_A1VQA5 TRAG family protein n=2 Tax=Burkholderiales RepI... 287 1e-75 UniRef50_A9ATZ0 Type IV secretion system protein n=1 Tax=Burkhol... 285 3e-75 UniRef50_UPI0001B44E8D hypothetical protein CdifQCD-6_07437 n=1 ... 285 3e-75 UniRef50_UPI0001C35621 ATPase involved in conjugal plasmid trans... 284 1e-74 UniRef50_Q07GJ0 VirD4 protein, putative n=1 Tax=Roseobacter deni... 284 1e-74 UniRef50_C2BRH0 TraG/TraD family protein n=1 Tax=Mobiluncus curt... 284 1e-74 UniRef50_P18594 Protein virD4 n=16 Tax=Rhizobiales RepID=VIRD4_A... 282 3e-74 UniRef50_Q91UW5 TraN protein n=1 Tax=Plasmid pIPO2T RepID=Q91UW5... 281 5e-74 UniRef50_A6UMU5 TRAG family protein n=5 Tax=Rhizobiales RepID=A6... 281 5e-74 UniRef50_Q5I734 VirD4 n=1 Tax=Dichelobacter nodosus RepID=Q5I734... 281 8e-74 UniRef50_C6NY79 TraG n=1 Tax=Acidithiobacillus caldus ATCC 51756... 280 1e-73 UniRef50_C5SH52 TRAG family protein n=1 Tax=Asticcacaulis excent... 280 1e-73 UniRef50_A3ETT1 Probable conjugal transfer protein (TraD) n=1 Ta... 279 3e-73 UniRef50_Q9PHI9 Conjugal transfer protein n=1 Tax=Xylella fastid... 278 7e-73 UniRef50_A4TUK6 Conjugal transfer protein n=2 Tax=Magnetospirill... 278 7e-73 UniRef50_C8WH79 TRAG family protein n=1 Tax=Eggerthella lenta DS... 277 8e-73 UniRef50_C6XEP7 TRAG family protein n=1 Tax=Methylovorus sp. SIP... 275 3e-72 UniRef50_Q5DY60 Protein VirD4 n=1 Tax=Vibrio fischeri ES114 RepI... 275 3e-72 UniRef50_Q07GD2 VirD4 protein, putative n=6 Tax=Bacteria RepID=Q... 275 4e-72 UniRef50_A6GUT0 Conjugal transfer protein TraG n=1 Tax=Limnobact... 275 5e-72 UniRef50_B7JB37 TraG/TraD family protein n=3 Tax=Acidithiobacill... 274 8e-72 UniRef50_D2UFC9 Putative type iv secretory pathway, conjugal tra... 274 9e-72 UniRef50_C7GFT5 TraG family protein n=15 Tax=Bacteria RepID=C7GF... 274 1e-71 UniRef50_D0ZHL9 Type IV secretory pathway component n=1 Tax=Edwa... 273 2e-71 UniRef50_B1I2W3 TRAG family protein n=1 Tax=Candidatus Desulforu... 273 2e-71 UniRef50_A3T2K0 Type IV secretion system coupling protein n=6 Ta... 273 2e-71 UniRef50_B2T050 TRAG family protein n=12 Tax=Burkholderia RepID=... 273 2e-71 UniRef50_O87219 TrsK protein (TraK) n=9 Tax=Lactobacillales RepI... 272 2e-71 UniRef50_A6NYJ8 Putative uncharacterized protein n=1 Tax=Bactero... 272 3e-71 UniRef50_A4VV00 Type IV secretory pathway, VirD4 component n=20 ... 272 3e-71 UniRef50_A4X0P9 TRAG family protein n=2 Tax=Rhodobacteraceae Rep... 271 6e-71 UniRef50_B4SNC9 TRAG family protein n=17 Tax=Proteobacteria RepI... 270 9e-71 UniRef50_D1PK86 TraG family protein n=8 Tax=Firmicutes RepID=D1P... 270 2e-70 UniRef50_Q0ACY8 TRAG family protein n=1 Tax=Nitrosomonas eutroph... 269 2e-70 UniRef50_Q0ACU1 TRAG family protein n=1 Tax=Nitrosomonas eutroph... 269 2e-70 UniRef50_D1PJ06 TraG family protein n=41 Tax=Bacteria RepID=D1PJ... 269 3e-70 UniRef50_Q5ZW42 LvhD4 n=6 Tax=Legionella RepID=Q5ZW42_LEGPH 269 3e-70 UniRef50_C6M7A4 Protein VirD4 n=1 Tax=Neisseria sicca ATCC 29256... 268 5e-70 UniRef50_C5D068 TRAG family protein n=1 Tax=Variovorax paradoxus... 267 1e-69 UniRef50_B9JPS9 TRAG protein n=1 Tax=Agrobacterium radiobacter K... 266 2e-69 UniRef50_Q17U09 TraJ n=11 Tax=root RepID=Q17U09_ECOLX 266 2e-69 UniRef50_D0UIQ5 Conjugal transfer protein TraG/VirD4 n=1 Tax=Agg... 266 3e-69 UniRef50_C9LC04 ATPase n=12 Tax=Bacteria RepID=C9LC04_RUMHA 265 3e-69 UniRef50_C6RJZ5 Putative uncharacterized protein n=1 Tax=Acineto... 265 4e-69 UniRef50_Q00184 Conjugal transfer protein traG n=32 Tax=root Rep... 265 5e-69 UniRef50_A0P1U0 TRAG protein n=1 Tax=Labrenzia aggregata IAM 126... 264 8e-69 UniRef50_A7VQG5 Putative uncharacterized protein n=12 Tax=Bacter... 263 2e-68 UniRef50_C5F2H7 Conjugal transfer protein TraG n=1 Tax=Helicobac... 263 2e-68 UniRef50_A7FC77 Conjugal transfer protein TraG n=7 Tax=Gammaprot... 263 2e-68 UniRef50_A5ZXL8 Putative uncharacterized protein n=2 Tax=Ruminoc... 262 4e-68 UniRef50_C9M9B4 Conjugal transfer protein TraG n=1 Tax=Jonquetel... 262 5e-68 UniRef50_A4IU07 TrsK n=4 Tax=Geobacillus RepID=A4IU07_GEOTN 261 6e-68 UniRef50_C9D4W2 Trag family protein n=2 Tax=Silicibacter sp. Tri... 261 6e-68 UniRef50_C2ZYM5 TraG/TraD n=2 Tax=Bacillus cereus RepID=C2ZYM5_B... 260 1e-67 UniRef50_A4J2S8 TRAG family protein n=1 Tax=Desulfotomaculum red... 260 1e-67 UniRef50_C2BD69 TraG/TraD family protein n=1 Tax=Anaerococcus la... 260 2e-67 UniRef50_Q981R7 Component of type IV secretion system n=1 Tax=Me... 259 2e-67 UniRef50_B5E5D6 Tn5253 TraG protein n=7 Tax=Streptococcus pneumo... 259 2e-67 UniRef50_UPI000196DA88 TRAG family protein n=1 Tax=Neisseria muc... 258 7e-67 UniRef50_Q6LGU8 Putative uncharacterized protein n=1 Tax=Photoba... 257 9e-67 UniRef50_B8KYV9 Putative type IV secretory pathway VirD4 compone... 257 9e-67 UniRef50_C7N7M2 Type IV secretory pathway, VirD4 component n=2 T... 257 1e-66 UniRef50_D1AV80 TRAG family protein n=2 Tax=Streptobacillus moni... 257 1e-66 UniRef50_D1LZH1 TraG n=1 Tax=Rhizobium leguminosarum bv. viciae ... 257 2e-66 UniRef50_C8S1Z9 TRAG family protein n=1 Tax=Rhodobacter sp. SW2 ... 257 2e-66 UniRef50_C4GHF7 Putative uncharacterized protein n=1 Tax=Kingell... 256 2e-66 UniRef50_C9R835 TRAG family protein n=1 Tax=Ammonifex degensii K... 256 2e-66 UniRef50_C6LA24 TraG/TraD family protein n=1 Tax=Bryantella form... 254 1e-65 UniRef50_C6BB42 TRAG family protein n=15 Tax=Alphaproteobacteria... 254 1e-65 UniRef50_UPI0001C37912 TRAG family protein n=1 Tax=Ruminococcus ... 253 2e-65 UniRef50_A7VXU9 Putative uncharacterized protein n=1 Tax=Clostri... 252 2e-65 UniRef50_Q8ZSH1 Alr7539 protein n=6 Tax=Nostocaceae RepID=Q8ZSH1... 252 3e-65 UniRef50_C5EJN7 Predicted protein n=1 Tax=Clostridiales bacteriu... 252 3e-65 UniRef50_B2TS91 Type IV secretory pathway, VirD4 component n=1 T... 252 4e-65 UniRef50_Q2ESM6 Hypothetical conjugation protein n=6 Tax=Bacillu... 252 4e-65 UniRef50_Q8E5A4 Putative uncharacterized protein gbs1128 n=3 Tax... 251 6e-65 UniRef50_A7GI48 TraG/TraD family protein n=4 Tax=Clostridium bot... 251 8e-65 UniRef50_B7KK02 Transfer complex protein TrsK-like protein n=4 T... 251 8e-65 UniRef50_B0T9Q1 TRAG family protein n=2 Tax=Caulobacter sp. K31 ... 250 1e-64 UniRef50_A5CZ99 Type IV secretory pathway, VirD4 components n=1 ... 250 2e-64 UniRef50_B0KAV4 TRAG family protein n=6 Tax=Thermoanaerobacteral... 250 2e-64 UniRef50_Q7WZN4 Putative transfer protein n=1 Tax=Stenotrophomon... 249 2e-64 UniRef50_A1WSU8 TRAG family protein n=2 Tax=Proteobacteria RepID... 249 2e-64 UniRef50_D0T015 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 249 3e-64 UniRef50_B1Y1V4 TRAG family protein n=1 Tax=Leptothrix cholodnii... 248 7e-64 UniRef50_A4J358 TRAG family protein n=2 Tax=Desulfotomaculum Rep... 248 8e-64 UniRef50_C2HEY6 TraG/TraD family protein n=4 Tax=Enterococcus fa... 247 1e-63 UniRef50_B5TTP2 TraN n=3 Tax=environmental samples RepID=B5TTP2_... 247 1e-63 UniRef50_B4B5T3 Putative uncharacterized protein n=1 Tax=Cyanoth... 247 1e-63 UniRef50_A8LU08 TraG family protein/type IV secretion system pro... 247 1e-63 UniRef50_C8WMY2 TRAG family protein n=2 Tax=Coriobacteriaceae Re... 246 2e-63 UniRef50_C7CWB6 Predicted protein n=2 Tax=Enterococcus faecalis ... 246 2e-63 UniRef50_Q7NIZ2 Glr2040 protein n=1 Tax=Gloeobacter violaceus Re... 245 4e-63 UniRef50_B6A5A8 TRAG family protein n=1 Tax=Rhizobium leguminosa... 244 7e-63 UniRef50_B4W828 TraG/TraD family n=1 Tax=Brevundimonas sp. BAL3 ... 244 8e-63 UniRef50_UPI00016C4AF4 Agrobacterium virulence virD4-like protei... 243 1e-62 UniRef50_C8W0M1 TRAG family protein n=1 Tax=Desulfotomaculum ace... 243 1e-62 UniRef50_Q6G2A8 Type IV secretion system-coupling protein virD4 ... 243 2e-62 UniRef50_D2L4F4 TRAG family protein n=1 Tax=Desulfovibrio sp. FW... 243 2e-62 UniRef50_Q2XV30 TraG/TraD family n=6 Tax=Staphylococcus aureus R... 243 2e-62 UniRef50_B7RP33 TraG/TraD family protein n=2 Tax=Roseobacter sp.... 243 2e-62 UniRef50_D1KAH2 TraG protein n=1 Tax=Bacteroides sp. 3_1_33FAA R... 242 3e-62 UniRef50_Q6X3G3 TraG n=2 Tax=Gammaproteobacteria RepID=Q6X3G3_PSEAE 242 3e-62 UniRef50_A6ASA7 Conjugal transfer protein TraK n=2 Tax=Vibrio ha... 241 6e-62 UniRef50_B2TSI9 TraG/TraD family protein n=3 Tax=Enterobacteriac... 239 4e-61 UniRef50_C0BU69 Putative uncharacterized protein n=1 Tax=Bifidob... 236 2e-60 UniRef50_B4WV81 Putative uncharacterized protein n=1 Tax=Synecho... 235 5e-60 UniRef50_C3WQ29 Conjugal transfer protein traG n=7 Tax=Fusobacte... 235 6e-60 UniRef50_B6JK53 Trag protein n=2 Tax=Bradyrhizobiaceae RepID=B6J... 234 7e-60 UniRef50_B7KLU0 Transfer complex protein TrsK-like protein n=3 T... 234 9e-60 UniRef50_B9D155 VirD4 n=1 Tax=Campylobacter rectus RM3267 RepID=... 234 1e-59 UniRef50_B5Z5X5 TrsK protein n=3 Tax=Bacillus cereus group RepID... 233 2e-59 UniRef50_D1CWC3 Conjugal transfer protein traG n=1 Tax=Brucella ... 232 3e-59 UniRef50_Q44346 Conjugal transfer protein traG n=28 Tax=Bacteria... 232 4e-59 UniRef50_D0UIW1 ATPase n=2 Tax=Aggregatibacter actinomycetemcomi... 232 5e-59 UniRef50_A3W6B6 Type IV secretion system coupling protein n=1 Ta... 231 8e-59 UniRef50_B6JNL0 VirD4 coupling protein n=10 Tax=Helicobacter Rep... 230 1e-58 UniRef50_A2RL04 Conjugal transfer protein TraD n=14 Tax=Lactobac... 230 1e-58 UniRef50_B2JXV0 TRAG family protein n=1 Tax=Burkholderia phymatu... 230 2e-58 UniRef50_A7HZT7 Cmgd4 n=14 Tax=Campylobacterales RepID=A7HZT7_CAMHC 230 2e-58 UniRef50_B1F9B8 TRAG family protein n=1 Tax=Burkholderia ambifar... 228 4e-58 UniRef50_B8I7H6 TRAG family protein n=23 Tax=Bacteria RepID=B8I7... 228 6e-58 UniRef50_C7WD59 TraG/TraD family protein n=1 Tax=Enterococcus fa... 228 7e-58 UniRef50_B8HZ08 Putative uncharacterized protein n=1 Tax=Cyanoth... 227 1e-57 UniRef50_A8S5W9 Putative uncharacterized protein n=4 Tax=Clostri... 227 1e-57 UniRef50_A3IXB1 Transfer complex protein TrsK-like n=2 Tax=Cyano... 227 1e-57 UniRef50_C6X7V8 Type IV secretory pathway VirD4 protein-like pro... 227 2e-57 UniRef50_B7Q9R6 Coupling protein TraD, putative (Fragment) n=1 T... 226 2e-57 UniRef50_B3Q3U5 Conjugal transfer protein G n=5 Tax=Rhizobium et... 226 3e-57 UniRef50_Q2Y574 TRAG protein n=1 Tax=Nitrosospira multiformis AT... 226 3e-57 UniRef50_C7WLP9 TraG/TraD family protein n=7 Tax=Bacteria RepID=... 225 3e-57 UniRef50_B1V6Z4 TraG/TraD family n=1 Tax=Clostridium perfringens... 225 4e-57 UniRef50_C7CN76 TraG conjugal transfer protein n=2 Tax=Methyloba... 224 1e-56 UniRef50_A5ESM8 Putative uncharacterized protein n=1 Tax=Bradyrh... 224 1e-56 UniRef50_A4JFK6 Type IV secretory pathway VirD4 components-like ... 223 2e-56 UniRef50_B2FKA6 Putative type IV secretory protein conjugation p... 223 2e-56 UniRef50_B1M954 TRAG family protein n=1 Tax=Methylobacterium rad... 223 2e-56 UniRef50_Q48B00 Conjugal transfer protein n=11 Tax=Gammaproteoba... 223 2e-56 UniRef50_UPI0001C37D75 putative conjugal transfer protein n=1 Ta... 222 3e-56 UniRef50_B7I163 Conjugation protein, TraG/TraD family n=31 Tax=B... 222 3e-56 UniRef50_C1XZF6 Type IV secretory pathway, VirD4 component n=1 T... 222 4e-56 UniRef50_A6BIV1 Putative uncharacterized protein n=2 Tax=Clostri... 222 6e-56 UniRef50_Q0GU00 TraG n=1 Tax=Lactococcus lactis RepID=Q0GU00_9LACT 221 6e-56 UniRef50_Q9F531 TraK protein n=8 Tax=Gammaproteobacteria RepID=Q... 221 7e-56 UniRef50_Q8GJE7 VirD4 n=1 Tax=Campylobacter jejuni subsp. jejuni... 221 7e-56 UniRef50_A7BSA0 TraG/TraD family protein n=1 Tax=Beggiatoa sp. P... 221 9e-56 UniRef50_A7ICP8 TRAG family protein n=1 Tax=Xanthobacter autotro... 221 1e-55 UniRef50_Q8VRC7 TraK-like protein n=2 Tax=Haemophilus influenzae... 220 1e-55 UniRef50_A8ZL40 Putative uncharacterized protein n=2 Tax=Acaryoc... 220 1e-55 UniRef50_D2QVF5 Type IV secretory pathway VirD4 protein-like pro... 219 2e-55 UniRef50_A3SLA3 TRAG protein n=1 Tax=Roseovarius nubinhibens ISM... 219 3e-55 UniRef50_B1X2K3 Putative uncharacterized protein n=1 Tax=Cyanoth... 219 3e-55 UniRef50_C2HF17 Putative uncharacterized protein n=1 Tax=Finegol... 218 8e-55 UniRef50_A7B3W9 Putative uncharacterized protein n=3 Tax=Clostri... 216 2e-54 UniRef50_D2P3C7 Putative uncharacterized protein n=1 Tax=Listeri... 216 3e-54 UniRef50_Q2K8S6 Probable transport secretion system IV, VirD4 pr... 215 4e-54 UniRef50_A8ZPT9 Putative uncharacterized protein n=1 Tax=Acaryoc... 215 5e-54 UniRef50_C8WMX7 TRAG family protein n=1 Tax=Eggerthella lenta DS... 215 5e-54 UniRef50_B3PCB8 TraG/TraD family n=1 Tax=Cellvibrio japonicus Ue... 215 6e-54 UniRef50_A7VRX1 Putative uncharacterized protein n=1 Tax=Clostri... 215 7e-54 UniRef50_Q03BN9 Type IV secretory pathway, VirD4 component n=2 T... 214 8e-54 UniRef50_B5EWG0 Conjugal transfer protein n=2 Tax=Enterobacteria... 214 9e-54 UniRef50_D0QMN9 TaxB n=15 Tax=Enterobacteriaceae RepID=D0QMN9_ECOLX 214 1e-53 UniRef50_Q82XL2 TRAG protein n=2 Tax=Nitrosomonas RepID=Q82XL2_N... 214 1e-53 UniRef50_Q1QQL5 TRAG protein n=1 Tax=Nitrobacter hamburgensis X1... 214 1e-53 UniRef50_Q8YK80 All8037 protein n=3 Tax=Nostoc RepID=Q8YK80_ANASP 214 1e-53 UniRef50_A4ZYV8 VirD4-like protein n=1 Tax=Bacillus subtilis Rep... 213 2e-53 UniRef50_A5P8K4 Putative uncharacterized protein n=1 Tax=Erythro... 211 1e-52 UniRef50_B8EPQ9 TRAG family protein n=1 Tax=Methylocella silvest... 211 1e-52 UniRef50_D2Q3V4 Type IV secretory pathway VirD4 protein-like pro... 210 1e-52 UniRef50_A5TXL7 Possible conjugal transfer protein TraG n=3 Tax=... 210 2e-52 UniRef50_C7N9P1 TRAG family protein n=1 Tax=Leptotrichia buccali... 208 7e-52 UniRef50_Q7M994 CONJUGAL TRANSFER PROTEIN (TRAG) n=1 Tax=Wolinel... 208 8e-52 UniRef50_C5RQH6 TRAG family protein n=1 Tax=Clostridium cellulov... 207 9e-52 UniRef50_B9NX87 TraG/TraD family protein n=1 Tax=Rhodobacteracea... 207 1e-51 Sequences not found previously or not previously below threshold: >UniRef50_P22708 Protein traD n=73 Tax=root RepID=TRAD2_ECOLX Length = 738 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 698/741 (94%), Positives = 708/741 (95%), Gaps = 27/741 (3%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWIL+GLVLW+KISWQTF+NGCIY Sbjct: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILIGLVLWVKISWQTFINGCIY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 WWCT+LEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWC EQLWSAFVLA+VVAL Sbjct: 61 WWCTSLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVAL 120 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII Sbjct: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP Sbjct: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS Sbjct: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 YSKLVDTLLSIKIEKLRT+LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN Sbjct: 301 YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 G+PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV Sbjct: 361 GDPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA+LFDVMNTRA Sbjct: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRA 480 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL Sbjct: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 PDLTCYVTLPGPYPAVKLSLKYQ RPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA Sbjct: 541 PDLTCYVTLPGPYPAVKLSLKYQARPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 Query: 601 SLFEPDVPEVVSGEDVTQAE------------------------QPQQPVSPAINDKKSD 636 SLFEP EV SGEDVTQAE QPQQPVS INDKKSD Sbjct: 601 SLFEP---EVASGEDVTQAEQPQQPQQPQQPQQPQQPQQPQQPQQPQQPVSSVINDKKSD 657 Query: 637 SGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRR 696 +GV+VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQ MQRR Sbjct: 658 AGVSVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQHMQRR 717 Query: 697 EEVNINVHRERGEDVEPGDDF 717 EEVNINVHRERGEDVEPGDDF Sbjct: 718 EEVNINVHRERGEDVEPGDDF 738 >UniRef50_B6ICH4 TraD protein n=1 Tax=Escherichia coli SE11 RepID=B6ICH4_ECOSE Length = 728 Score = 534 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 312/731 (42%), Positives = 444/731 (60%), Gaps = 25/731 (3%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS + K +TQGGQ+ S + MF Q+ + + L FF I + L W+++ W+T NG +Y Sbjct: 1 MS-STKHITQGGQVFSYMLNMFMQVNKRVSFWLIWFFVIFLPLFFWLRLPWETIRNGGLY 59 Query: 61 WW-CTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVA 119 WW T G + L + PVY+I + G+ + Q+L D YM+W LA A Sbjct: 60 WWLSLTARGEKALYRVPPVYDIPWNGQVLHATSEQILKDDYMVWAGNMFLQELYLALFWA 119 Query: 120 LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI 179 V + F++ L R G++Q+++E GGR+LTD+ K VAR +++ G+ S I I LP+ Sbjct: 120 SVAVGVLAFLIFRFLRRLGEKQAQDERIGGRELTDDVKAVAREMRRRGEASSICIDKLPL 179 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILN 239 + +SE+Q ++GT GAGKS + +L R RGDM +IYD+ +K ++ D +LN Sbjct: 180 LLNSEVQYLMMYGTPGAGKSNTLNKLLKQIRARGDMAIIYDKGCSLIKKHFSEQDDVLLN 239 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR 299 LD RCA WD+++E + PDFD+ A+TLIPMGTKEDPFWQ S RTIF+ AY + + Sbjct: 240 ALDRRCAYWDMFREFESIPDFDSAASTLIPMGTKEDPFWQSSARTIFSAVAYRQKKNGIH 299 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 SY+ L+ TLL+I ++ LR YL + A+NLVEEK+EKTAISIR+VLTNYVKA+RYLQGIE Sbjct: 300 SYNALLRTLLAIDLKALRDYLTGTEASNLVEEKVEKTAISIRSVLTNYVKALRYLQGIER 359 Query: 360 NG-EPFTIRDWMRGVREDQ--KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 G PFTIR+WM V + Q ++GWL+++SNA H SLKP+ISMWL+ A LL MGEN+ Sbjct: 360 TGRRPFTIREWMSTVNDPQITRHGWLWVTSNARQHESLKPLISMWLAQAANCLLGMGENQ 419 Query: 417 NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 +RR+WF DELP+L+KLP+L +L EARKFGGC+V G Q+ AQ++ YG++ A ++ ++ Sbjct: 420 HRRIWFIYDELPSLNKLPELPGVLAEARKFGGCFVLGFQAKAQMDYTYGKEFADAMLGLV 479 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 NTR FFRSPS AE+ EIG++ SEQYSYGAD VRDGVS K E + LV+Y+D Sbjct: 480 NTRYFFRSPSSTEAEWVQREIGQRRDKVFSEQYSYGADTVRDGVSFSKVEEDRYLVNYTD 539 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 IQ LP+L CYVT PG YPAV++ + Y+ A E + RDIN ++ + + + RE E Sbjct: 540 IQKLPNLHCYVTFPGEYPAVRMRMSYEKIKDCAEELLLRDINDSLDPEIESEITRREDED 599 Query: 597 RQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQE--LKMKP 654 +A+L + V +D PQ + ++N+ + V A + P Sbjct: 600 GDIAALLDRIAQGNVRKDDEQNKTAPQPEQAESLNNPVLAAAVTQVAAAAVTGGTGESNP 659 Query: 655 EEEMEQQLPPGISESGEVVDMAAYEAWQQENH--------PDIQQQMQRREEVNI----- 701 EE ++E E+VD E ++ Q+ R++E N+ Sbjct: 660 VEEKTP-----VTELTEIVDKETGEILYPDDERYDELCRDTCHAQEAMRQDERNLVSHQT 714 Query: 702 NVHRERGEDVE 712 N RE+ +D E Sbjct: 715 NEAREQDDDRE 725 >UniRef50_C8QEC7 Type IV conjugative transfer system coupling protein TraD n=2 Tax=Pantoea sp. At-9b RepID=C8QEC7_9ENTR Length = 880 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 271/662 (40%), Positives = 399/662 (60%), Gaps = 16/662 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSF K++TQGGQ+ + R+RMF Q++N + + + + F V ++ W+ NG Y Sbjct: 1 MSFTPKNLTQGGQMTAYRLRMFGQVSNWIFHWILLLFIAAVAVLFWLTTPDDVLRNGFWY 60 Query: 61 WWCTTLEGMRDLIK--SQPVYEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAF 112 W + L + ++I ++ T +M Q+L D +M + ++ Sbjct: 61 WAAWPSHSLLGLAPGTTTATWDILWHCGDGTSLCTTKMTPVQLLADPWMQAMGDAFVASL 120 Query: 113 VLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDI 172 A V + + +++W +GR GK++SE+E G LTD PK+V R+LKK G+ SD+ Sbjct: 121 KFLATVCGITAFALWCLIAWFVGRIGKKESEDEFISGMTLTDQPKEVNRLLKKAGEKSDL 180 Query: 173 RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP 232 +IG L +++++E+ NF +HGT+G GKS +IR L +Y R+RGD +IYD G F++++Y+P Sbjct: 181 QIGGLHMVKNAEVMNFLIHGTIGVGKSTLIRWLLDYIRRRGDRAIIYDSGGTFIETHYNP 240 Query: 233 SIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYL 292 DKILNP D+RC W LW+EC D++N L+P+ DPFW S RTIF++ A Sbjct: 241 RRDKILNPHDSRCENWVLWRECREVVDYENLTAALMPVEGDSDPFWVSSSRTIFSDGAMQ 300 Query: 293 MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 DP RS + TLLSI ++ LR +L+N+P+ANLVEEKIEKTAISIR+VLTNY K++R Sbjct: 301 FAADPARSIETFLKTLLSIDLKSLREFLKNTPSANLVEEKIEKTAISIRSVLTNYAKSLR 360 Query: 353 YLQGIEHNGEP-FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 YLQG++ G+P F+IR+WM G + D WLFIS+ A +++P+ISMWLS+A L + Sbjct: 361 YLQGLDKEGKPEFSIREWMTGAQYDS--SWLFISTTARHRRAVRPLISMWLSLATLLLQS 418 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 MGEN RRVWF DE+ +L K+P+L E L EARKFGGC+V G+Q+ QL IYG + A + Sbjct: 419 MGENSGRRVWFIGDEIASLQKIPELNETLAEARKFGGCFVLGVQNIPQLVHIYGREMAKA 478 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 +FD++NTRA+ RSPS ++A+ E+G + +A EQ SYG D VRDG+S KD + + Sbjct: 479 IFDLLNTRAYGRSPSAEVAKMVEEELGHQRRREAREQNSYGLDQVRDGISISKDKVNEPV 538 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 V Y I +P+L Y+ LPG YP VKLSLKY+ + K I RD + L ++ + Sbjct: 539 VDYDLIMKMPNLRFYMRLPGEYPVVKLSLKYRKQRKSHRALIERDFRDRLSPELERIIES 598 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQ----AEQPQQPVSPAINDKKSDSGVNVPAGGIE 647 E + A + P E++ +V E P SP K +D+ I Sbjct: 599 NE-RSARAADISFPTGEEILEAGNVQSVQKVPEPVAVPASPVTVRKVTDTTPAPGGADIA 657 Query: 648 QE 649 ++ Sbjct: 658 RD 659 >UniRef50_D1S138 Conjugal transfer protein TraD n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S138_SEROD Length = 786 Score = 521 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 286/696 (41%), Positives = 404/696 (58%), Gaps = 19/696 (2%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS + K++TQGGQI + + RMF QI N + + +F+ F I+ GL +++ +T NG Y Sbjct: 1 MSMSTKNITQGGQILAYQYRMFLQINNKIGFWIFMMFLIITGLGVFLVTPLETIQNGSWY 60 Query: 61 WWCTTLEGMRDLIKSQPV-YEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAFV 113 W+ + L ++ Y+I+Y+ T +M Q+L D YMI E+LW+ Sbjct: 61 WFANINKSFLFLSENDTTTYDIKYFYAPTKVMYTLKMTMTQMLGDPYMIAMGEKLWNRIT 120 Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 ++ + + F +++W +G+ GK+QS +E+ G +LTD+PK V ++LK++G+ SD+ Sbjct: 121 YTSMFSGGFSISVFCLITWYIGKIGKEQSSDEILSGMELTDDPKVVNKLLKENGECSDLS 180 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 + L +++ SEI N +HGT+ GKS +IR L R+RGD +I+D FV+S Y P Sbjct: 181 VYHLHLVKQSEILNLLMHGTISVGKSTIIRYLLKQIRERGDRAIIWDSGCTFVESNYRPD 240 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAAYL 292 D ++NP D RCA W LW EC PD+DN AN+LIP G DPFW S RTIF+ AA Sbjct: 241 KDFLMNPYDERCANWHLWGECSNMPDYDNMANSLIPVEGESTDPFWVSSARTIFSSAASQ 300 Query: 293 MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 M DP +S K + LLS+ I+ LR+YL ++ AA+LV+EKIEKTAISIR+V+TNY K++R Sbjct: 301 MDTDPEQSIEKFLRVLLSLSIKNLRSYLEHTEAASLVDEKIEKTAISIRSVITNYAKSLR 360 Query: 353 YLQGIEHNGEP-FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 YLQG++ +G+P FTIRDWM WLFIS+NA +SL+P+ISMWLS+A L++ Sbjct: 361 YLQGLDRSGKPRFTIRDWMTNPAMSD--SWLFISANAQQKSSLRPLISMWLSLATINLMS 418 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 MG++ RRVWF DELP L KLP+L ++ EARKFGGC+V GIQ+ QL IYG S Sbjct: 419 MGQDAKRRVWFILDELPGLQKLPELPGVMAEARKFGGCFVIGIQNMPQLIQIYGRNMGES 478 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 LFD++NTR + RSPS +A+ E+G + +A EQYSYG D +RDGVS KD R+ + Sbjct: 479 LFDLLNTRFYGRSPSATVAKLVEAELGMQRRKEAKEQYSYGPDQIRDGVSLAKDKVREPI 538 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 V Y I LP+L YV LPG YP KL LKY P I R+ N + + L Sbjct: 539 VDYDQIMRLPNLNFYVRLPGEYPVTKLKLKYLDSKNTQPALILRNFNESLNPEIEK-LVQ 597 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELK 651 A+L P P G+ VT P+ + + P + + Sbjct: 598 HNERAASAANLIFPINPYEEGGDTVTAKPIPEPMPA-------VNVEQQQPDPSLAPISE 650 Query: 652 MKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHP 687 P + + I S EV+D Q + P Sbjct: 651 APPLQSISPVRSDVIQPSAEVLDKVMSTPVSQASVP 686 >UniRef50_A4WGU5 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGU5_ENT38 Length = 840 Score = 507 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 278/680 (40%), Positives = 402/680 (59%), Gaps = 15/680 (2%) Query: 14 IASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLI 73 + + R RMF Q+ N + + +FI F +L + + +I +T NG ++W+ DL+ Sbjct: 1 MTAYRWRMFLQVNNWIGFWIFILFAVLASAIFFWRIPQETLDNGSLWWFAWMNSSFIDLM 60 Query: 74 KS--QPVYEIQYYGK------TFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLI 125 + +Y+I Y+ +M AQ+ D YM +Q+ S A + + V + Sbjct: 61 PASAPKLYDIHYWYAPTQTPMVLKMTLAQIFTDPYMTAMGDQVLSELQWAGLASGVFSMA 120 Query: 126 TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEI 185 F V+W + G+++SE+E G LTD DV ++L+++G+ SD+R+GDL ++R +E+ Sbjct: 121 VFLAVTWYIVGIGRRESEDEYLSGMTLTDKAADVNQLLRRNGELSDLRVGDLHMVRMAEV 180 Query: 186 QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARC 245 NF +HGT+G GKS +IR L +Y R+RGD +IYD F +++Y+P D ILN D RC Sbjct: 181 MNFLMHGTIGVGKSTLIRWLLDYIRKRGDRAIIYDSGCTFTETHYNPDTDFILNAHDDRC 240 Query: 246 AAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLV 305 A W LW EC+ D+DN A++LIP+ + DPFW S RTIFA+ A M DP+RS K + Sbjct: 241 ANWQLWGECVDAVDYDNMASSLIPVEGESDPFWVSSSRTIFADLAIRMSVDPDRSIEKFL 300 Query: 306 DTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE-PF 364 TLLS+ ++ LR YL N+P+ANLVEEKIEKTAISIR+V+TNY K++RYLQG++ + PF Sbjct: 301 KTLLSLSMKSLREYLANTPSANLVEEKIEKTAISIRSVVTNYAKSLRYLQGLDDGVKPPF 360 Query: 365 TIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFC 424 TIR+WM D WLFIS+ A S++P+IS+W+S+A L +MGEN +RRVWF Sbjct: 361 TIREWMTKEEHDS--SWLFISTQARHRKSVRPLISLWVSLATMMLQSMGENSDRRVWFIY 418 Query: 425 DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS 484 DE+P+L ++P+L E L EARKFGGC+V G+Q+ AQL +YG + A S+FD+MNTR + RS Sbjct: 419 DEIPSLQRIPELAETLAEARKFGGCFVLGMQNMAQLVHVYGRELAKSIFDLMNTRMYGRS 478 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 PS ++A+ E+G + K EQ SYG D VRDGVS GKD +V Y + LP+L Sbjct: 479 PSAEMAKVVEEELGNQRKRKIREQNSYGLDQVRDGVSLGKDEVNNPIVDYEQVMRLPNLN 538 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE 604 YV LPG YP V+L LKY+ + K P I R+I+ + L V+ A E +A L Sbjct: 539 FYVRLPGEYPVVRLKLKYREQKKHHPGLIERNIHDALSPELEKVIQANE-RAASVAGLAF 597 Query: 605 PDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPP 664 P EV+ E + +E +PA + V A I Q+ + + P Sbjct: 598 PTGDEVL--EKGSNSETATTINTPATVRQTPVVAKPVTASAISQKP-APAVTAVNKPDEP 654 Query: 665 GISESGEVVDMAAYEAWQQE 684 + V A E + Sbjct: 655 VLPVKHSPVTPPATEPEKNN 674 >UniRef50_B8EFQ3 Type IV conjugative transfer system coupling protein TraD n=14 Tax=Gammaproteobacteria RepID=B8EFQ3_SHEB2 Length = 708 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 245/718 (34%), Positives = 391/718 (54%), Gaps = 26/718 (3%) Query: 1 MSFNAK-----DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFV 55 M+ N K + T+GGQI +RMF QI +++ IL L+ ++ I T Sbjct: 1 MTLNPKRTKGSNYTRGGQILFHNLRMFLQINAVLIRWTCYGVLILTALLCFLFIDKDTLT 60 Query: 56 NGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLA 115 YW T+ R V + ++ G + L + +I + + W + Sbjct: 61 GAYYYWINQTVSMFR---PESHVMQTEWQGTVYTSTLGSQLQNPILIAANSRFWLWSQIY 117 Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 +++ VI + V W ++G +Q+E G Q PK++A+ LKKD + SD ++ Sbjct: 118 FLISCVIGFVFLSVAMWFFKKKGDEQTEEHFIRGMQKA-TPKELAKQLKKDKRQSDFKLD 176 Query: 176 DLPIIRDS-EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 + I ++ E+Q+ L GT GAGKS +R+ + R+RGD +IYD+ FV +Y+P+ Sbjct: 177 GIGIFKERFEVQHLLLDGTTGAGKSVALRKFLTWIRERGDKAIIYDKGCTFVSKFYNPAT 236 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR 294 D +LNP D RCA WD+W + DF+N A+ LIP + DPFW S RTIF+ A+ M+ Sbjct: 237 DVLLNPFDERCAYWDVWCDAHEPSDFENMASALIPQHGEGDPFWVQSARTIFSSTAFKMQ 296 Query: 295 NDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIR 352 ++P N++ +L++ +L+ ++E L YL+ + +A+LV +KI+KTAISI++VL Y+K++R Sbjct: 297 DEPKMNQTTERLLELMLTSELESLSEYLKGTESASLVSDKIQKTAISIKSVLAAYIKSLR 356 Query: 353 YLQGIEH-------NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 +L G++ F+IR+W++ D +NG+LF+SSNA HASL+P+ISMWLSIA Sbjct: 357 FLAGLDEKDGQGKLLRRKFSIREWVKN---DAENGFLFLSSNAQQHASLRPLISMWLSIA 413 Query: 406 IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 +L E+ +RR+W DE P+LHKLP+L E + E RKFGGCYV GIQS+AQL+ +YG Sbjct: 414 STAILEQDEDPDRRIWVLMDEAPSLHKLPELAETIAEVRKFGGCYVIGIQSFAQLKKVYG 473 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 E AA +FD++NTR FFRSPS+++A+ ++ ++GE+E + EQYSYGA+ +RDGVS G Sbjct: 474 ENAALEMFDLLNTRLFFRSPSNEMAKISSHDLGEQEVDVSKEQYSYGANEIRDGVSLGHQ 533 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINP-EMENR 584 + +V+ S+I L DL ++ PG YP V++ L++ + FI R+ P E + Sbjct: 534 TITRPVVTPSEIMQLEDLQFWLRTPGNYPVVRVDLEFNQMRSLCAPFIKRNYTPSENIKQ 593 Query: 585 LSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAG 644 + L + Q + + + E + + A K + A Sbjct: 594 IEWSLNYHQFSAVQHVDKADKTKLQSIHDTMYEGDENNDERSAEAQRMTKLAEKTDAVAQ 653 Query: 645 GIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNIN 702 + K KP E L + + + + QQ EE++++ Sbjct: 654 SLIDAKKAKPTE---LALKDAQKKKAAEKQKTNDQHIEDAQRLEEQQIASVHEEISLD 708 >UniRef50_B2VB35 TraD protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB35_ERWT9 Length = 788 Score = 497 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 251/722 (34%), Positives = 381/722 (52%), Gaps = 44/722 (6%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSF D+T+GGQI + R++MF+Q+ N + + L ++ + NG Y Sbjct: 1 MSFRPSDITKGGQITAYRVKMFNQVNNWFSFWIVTVLMGASLLAFFLVTPPEIISNGLTY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEI-------QYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFV 113 W + E L+ + + VL + M + Sbjct: 61 WIARSSESFLGLVVNDTAKAFSYAIYRGDLKLSEVPLTLGDVLRSQIMRDVGDVFLIRLE 120 Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 + A V + LI +F++ + + R GK+++ +E G TD+PK V +ML ++ S I+ Sbjct: 121 MYAGVGATLSLIIYFILMFGVARIGKKETADEYISGMTRTDSPKVVNKMLAQNRALSPIK 180 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPS 233 IG L +++++EIQNF +HGT+G GKS +IR L +Y R+RGD +++D G F+K++++ Sbjct: 181 IGPLHMVKNAEIQNFLIHGTIGTGKSTIIRYLLDYIRKRGDRFIVFDPGGTFIKTHFNAR 240 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 D IL+P DARCA WDLW EC T D++N A++LIP+ DPFW S RTI A+ A M Sbjct: 241 RDFILDPHDARCANWDLWHECQTVVDYENFASSLIPIEGNSDPFWVSSSRTICADTAMRM 300 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 N + + T+LS+ ++ LR +L+N+P+ANLVEEKIEKTAISIR+V TNY KA+R+ Sbjct: 301 SRKENPTIEDFLHTILSLSLKSLREFLKNTPSANLVEEKIEKTAISIRSVTTNYAKALRF 360 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 +QG+ + F+IR+W++ Q + LFIS+N S + +ISMWLS+A L +MG Sbjct: 361 MQGVNQGQDKFSIREWIQD--NRQSHSGLFISTN--FLRSTRSLISMWLSMATTLLQSMG 416 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 E+RNRRVWF DE+ +L K+P E L +ARK+GGC+V GIQ+ AQ+ D YG A ++ Sbjct: 417 EDRNRRVWFIYDEVASLQKIPGFRETLADARKYGGCFVLGIQNMAQMSDTYGRDNAKAVL 476 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 D++NTR + RSPS +A E+G + ++ EQ S+G D VRDG+S G+D + +V Sbjct: 477 DLVNTRIYGRSPSSDMATDVQNELGYQRRWESKEQNSFGLDQVRDGISIGRDKVHEPVVD 536 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAARE 593 +I SLPDL + LPG YP +KL++ Y+ PK A +I R + + + ++ E Sbjct: 537 KEEIMSLPDLRFFFRLPGEYPVIKLAVPYRDLPKKAESYIERSFHDSLSPLIEKIIEHNE 596 Query: 594 AEGRQMASLFEPDVPEVVSGEDVTQAEQPQQ----------------------------P 625 +E + + F P G+ EQP Sbjct: 597 SE---IPADFTEATPAQAVGQSKAAQEQPATADELPDMPVPAPSVPAPGAAKADTAAPDN 653 Query: 626 VSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQEN 685 V+ K P E+ P E + P S + AA + Sbjct: 654 VTDIFARVKDKVPQTQPGQSAAAEITPPPVREA--EPGPAARVSEPAQNPAASAEPAPVS 711 Query: 686 HP 687 P Sbjct: 712 KP 713 >UniRef50_Q5ZTT3 TraD n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTT3_LEGPH Length = 630 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 201/622 (32%), Positives = 334/622 (53%), Gaps = 13/622 (2%) Query: 1 MSFNA-KDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCI 59 M+ N K +GGQI +RMF+Q+ + + I F+I + + S G Sbjct: 2 MAVNPTKLFIRGGQIFLHNVRMFTQVGKKVSLAMLIVFFIFSVIAFYFNTSAYQRYIGQQ 61 Query: 60 YWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVA 119 + + ++ G+++ + +AQ++ +I QL A + + + A Sbjct: 62 WVKAQAMTLIQ---SKAKQVVRMPTGESYPVYSAQIVKAPMVIGIVNQLKQALLKSMIEA 118 Query: 120 LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI 179 L ++ V+ L ++G+ QS+ ++ G +L D + + +KK + S RIG + + Sbjct: 119 LFASVMMLIVMVKWLQKRGENQSKAKIIRGSELVD-ENTLQKCIKKTSRISPYRIGGVSL 177 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILN 239 SE Q+ + GT G+GK+ IR L + RG+ +IYD+ G ++ +Y D ILN Sbjct: 178 PFGSETQHIQIVGTTGSGKTVAIRDLLTTIQARGERAIIYDKGGTYLSRFYREHQDVILN 237 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPM--GTKEDPFWQGSGRTIFAEAAYLMRNDP 297 PLD R +W++W EC + D + A ++PM DPFW + R IF A ++NDP Sbjct: 238 PLDTRGHSWNVWAECEDKADLEALAEAIMPMPINNTMDPFWIKAARMIFVSTANELKNDP 297 Query: 298 NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 RS L+ LL+ + ++ LR++ + +LV +K++KTA++++ V+ Y+K++ YL+ Sbjct: 298 KRSNLMLLQYLLTADLGRIHHLLRHTESESLVSDKVQKTALNVKTVMATYLKSLLYLKD- 356 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 +G+ F+IRDW+ Q N LF+SS+ H +++P+IS W++ A + LL++ + N Sbjct: 357 --DGDIFSIRDWILNE---QNNSCLFVSSDGRKHPTIRPLISAWINTATKELLSLAPDDN 411 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RRVWF DEL TLH LP L + E+RKFGGC++ G +QL IYG AASL ++ + Sbjct: 412 RRVWFILDELATLHALPFLAAVKSESRKFGGCFLLGHHGASQLRTIYGNDGAASLSNLCS 471 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 TR F R P H AE A+ IG E + +E SYGA+ +RDG+S + + + LV + I Sbjct: 472 TRLFLRLPEHTDAEHASRNIGTYEIEEVNESISYGANTMRDGISVSRQTKEKQLVLPTQI 531 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGR 597 Q + DL Y+ + G +PA K+ L Y P + EFI RDI+P+ + L ++ Sbjct: 532 QVINDLQGYLRVKGEFPAAKIKLNYVDYPLIHEEFIARDIDPDPLRQKVEQLVDTYSDPI 591 Query: 598 QMASLFEPDVPEVVSGEDVTQA 619 AS + + +D+T+ Sbjct: 592 LAASHDDALEAATSTKKDITKP 613 >UniRef50_A8QYR8 TraD protein n=8 Tax=Gammaproteobacteria RepID=A8QYR8_9GAMM Length = 621 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 235/624 (37%), Positives = 359/624 (57%), Gaps = 9/624 (1%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWC 63 N K T+GGQI+ +RM+ QI + IF+ + + +W IS + + I+++ Sbjct: 6 NFKHYTRGGQISFHNLRMWDQITKTLSMICLIFWIVFTLVFVWFFISLEKITHAVIFYYA 65 Query: 64 TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC 123 LE + + +E+ ++GKT++ +L+ Y + + + +A+ A + Sbjct: 66 QFLEI----VGQKHTFELSFHGKTYKQTVDSILNYAYYQDNANHVIHSLGKSALWAFCLS 121 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDS 183 I +++ ++GK QS+++ G Q + V + + +D SDI I P+I++S Sbjct: 122 FILGLCLAYYFIKRGKAQSDSQFVRGSQF-KHSNVVKKKILRDKAHSDITIDTFPLIKNS 180 Query: 184 EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDA 243 E+Q+ +HGTVG GKS++I ++ + R+RGD V++YD+ F+ YY D ILNP D Sbjct: 181 EVQHVLVHGTVGTGKSQLIMKIMDCLRKRGDRVIVYDKGCSFIAHYYQDESDVILNPFDK 240 Query: 244 RCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSK 303 RCA WD+W E DF+N A + IPM + DPFW + RT+F+ +MR+ +RS K Sbjct: 241 RCANWDMWLEAPRDSDFENMAESSIPMHGESDPFWVNASRTVFSCLGSVMRHHSDRSVEK 300 Query: 304 LVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP 363 L+ +L+ + L YL+ +PAA LV KIEKTAISIRA LT Y+K+ L + G+P Sbjct: 301 LLKLILTDEFSDLEEYLQGTPAATLVSSKIEKTAISIRATLTTYLKSFSALAELNQEGKP 360 Query: 364 -FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWF 422 F+IRD++ ++Q+ GWLFISSN +TH SLKP+ISMWL+ A LL++ +RNRR+WF Sbjct: 361 PFSIRDYIL---DEQQKGWLFISSNGETHKSLKPLISMWLAQASLALLSLTPDRNRRIWF 417 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF 482 CDELP+LHKLP L E + E RKFGGC++ G+QS++QL +YG+ +FD++NTR FF Sbjct: 418 ICDELPSLHKLPLLGETIAEVRKFGGCFLLGMQSFSQLTKVYGQAGGREIFDLLNTRFFF 477 Query: 483 RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD 542 RSPS +A A E+GE+E ++ E YSYGA+ +RDG+S G + +VSY I L D Sbjct: 478 RSPSSDMARLVASELGEEEIEESRENYSYGANSIRDGISLGAQRVTRPIVSYPQIMELKD 537 Query: 543 LTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASL 602 L C+V LPG YP +L+L R FI R++ + G Sbjct: 538 LHCFVRLPGHYPITQLTLDLGFRTIKTNGFIERNMPTTFNFSQLTSIDEDWESGTDGHVG 597 Query: 603 FEPDVPEVVSGEDVTQAEQPQQPV 626 + ++ E E +P+ Sbjct: 598 SKQPNKNKINAEHQCIEELNLEPL 621 >UniRef50_D0Z587 IncF plasmid conjugative transfer protein TraD n=3 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z587_LISDA Length = 711 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 219/723 (30%), Positives = 353/723 (48%), Gaps = 30/723 (4%) Query: 2 SFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYW 61 N K T+GGQI +RM+ QI ++ + +I L + I + Y Sbjct: 10 KSNTKAFTRGGQITFHNLRMYFQILAVIGSWSMVIAFIFTALFAYFLIDIDQLLALKYY- 68 Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 + L + Y G+ + A ++L + + ++ LA + + Sbjct: 69 -----FHAKYLALPDTKIMVMYQGQEYPYTAEKLLSSERFNASVDDVFLDIQLAFIFSFF 123 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI-I 180 +I F V+ ++G++Q+++ + G ++ P+++ R LKKD S ++ L + Sbjct: 124 AVMIAFMKVTKYFEKKGEEQTQDYLIRGTEIA-TPQELERRLKKDKNTSPFKLDGLSLLP 182 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 + EI++ G+ G GKS IR+L R RGD +IYD+ FV +YD D ILNP Sbjct: 183 NNFEIRHLSFSGSTGTGKSVAIRKLLREIRARGDKAIIYDKGCTFVSRFYDEHKDYILNP 242 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR- 299 D R W +W + DF++ + LI DPFW S RT+F AY M D Sbjct: 243 FDERSVDWKIWYDAQEFSDFESLSTALIADSGHGDPFWIESARTLFTNTAYQMTQDGKPL 302 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 + +L+D +L LR +L+ + A+ + +EK +K AIS++++L Y+K++RYL+G++ Sbjct: 303 TNERLLDYILKTPTSVLREFLKGTMASAITDEKADKIAISVKSILAAYIKSLRYLEGLDQ 362 Query: 360 N------GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 + F++RDW+ E G+LF++SNA H SL+P+ISMWLS A +L + Sbjct: 363 QDKNGKRRKAFSVRDWVLDDNE---KGFLFLTSNAQQHVSLRPLISMWLSTASTAILGLD 419 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 E+ RR+W DELP+LH+LPDL L E RK GGCY+ G QS+AQ IYG AA ++ Sbjct: 420 ESTTRRIWVITDELPSLHRLPDLASTLAEVRKHGGCYLVGFQSFAQFVKIYGRDAAEEMY 479 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVS 533 D++NTR +FR+PS AE ++ ++GE+E + EQYSYGA+ VRDG+S G + V Sbjct: 480 DLLNTRFYFRNPSAPQAEKSSKDLGEQEIEISKEQYSYGANSVRDGISLGHQTITRPAVM 539 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN-PEMENRLSAVLAAR 592 S+I +L DL C+ G YP +++ K+ VA FI R + + R+ LA Sbjct: 540 TSEIMALDDLQCWYRTFGGYPITRINFKFDDMASVAVPFIKRVYDSSDTMKRIDGELAHY 599 Query: 593 EAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKM 652 + + V + + Q + D + + E+ K Sbjct: 600 QMGALLALPDEDKQVLLNIHK---ARHNNEQGDCDQSSYDNECEQMKETVKENNERIEKE 656 Query: 653 KPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGEDVE 712 +PE+E + I + + ++ + Q + EE IN D+ Sbjct: 657 QPEKEKSRNDDQDIEKQKMKEEQELKRQMSADDQTE--QAFRETEETMIN------NDMT 708 Query: 713 PGD 715 P D Sbjct: 709 PFD 711 >UniRef50_D2TZY7 Conjugal transfer protein TraD n=1 Tax=Arsenophonus nasoniae RepID=D2TZY7_9ENTR Length = 687 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 253/689 (36%), Positives = 378/689 (54%), Gaps = 21/689 (3%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS +A++MTQGGQ+ + MF QIANI+ + + I ++ + ++I + ++G Y Sbjct: 3 MSLDARNMTQGGQVIKYMVAMFMQIANIVAFWVIIATVMVFFATIAVQIPLEKMIHGLAY 62 Query: 61 WWCTTLEG---MRDLIKSQPVYEIQYYGKT------FRMNAAQVLHDKYMIWCSEQLWSA 111 W L + + F A +V D+Y I+C L A Sbjct: 63 WAIDKLVIPLQEAIGTSEGGTFTFHWLNPRTGQVIEFEKTAREVRLDRYFIYCYVLLKEA 122 Query: 112 FVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD 171 A VA + V W LG++G QQ +NE+ GGR L ++ K++ + LK GK S Sbjct: 123 AFWAWGVASFTFVGLIVAVFWWLGKKGAQQRKNEIIGGRYLANSVKEINQFLKAKGKLSS 182 Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 ++IGDL ++ +SE QN LHGTVG GKS VI L R++ ++YD+ F+ +Y Sbjct: 183 LKIGDLHLVENSEQQNIGLHGTVGTGKSTVINDLLTQVRKQRKRAIVYDKGNNFIPLFYR 242 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 D ILNP+DARC WDLW+EC + DF+ A L P DPFW S R +F A Sbjct: 243 EGKDIILNPMDARCPNWDLWRECQDRADFETFALPLFPDAKSGDPFWLMSARLLFVATAE 302 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 MR+ P+RS KL+ LLSI + +L +++ + AANLV+ IEKTA++IR VL+ YVKA+ Sbjct: 303 HMRSHPDRSIKKLLQRLLSISLAELHDFVQGTDAANLVDGSIEKTAMTIRTVLSAYVKAL 362 Query: 352 RYLQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 RY QG+E + PF+IR+W++ ED W+FISS+ H +LKP+IS WL++ ++ +L Sbjct: 363 RYCQGLEKESKPPFSIREWVQNANED---AWIFISSDGRLHTALKPLISTWLNLTMQSVL 419 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 A+ +R R+W DELP+LHKLP + + L EARKFGG + GIQ+++QLE YG A Sbjct: 420 ALTPSRESRIWTVLDELPSLHKLPVISDYLSEARKFGGATLIGIQNFSQLEANYGAHDAR 479 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 +++D+ NT +FR+PS +AE+ E+GE LK +QYSYG D +RDGV+ K+ R+ Sbjct: 480 NIWDLANTSLYFRAPSGSVAEWVQKELGETRLLKFRDQYSYGVDTIRDGVNFSKEDTREK 539 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLA 590 +VS+SDIQ+L DL C+V+L G P VKL+L+++ +A I RD++ +N++ L Sbjct: 540 IVSFSDIQNLDDLECFVSLRGNVPIVKLTLEHKPYETIAAGKIERDVSAVFDNQIEQELN 599 Query: 591 AREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD-------SGVNVPA 643 E ++ L + ++P + + P Sbjct: 600 KSGIE-NKVDKLVTGRRNQSNQSNQNQTNNPQTMEITPPEQTHYVEPVNYYGTAKTGKPV 658 Query: 644 GGIEQELKMKPEEEMEQQLPPGISESGEV 672 E+ P +E L S EV Sbjct: 659 LEAEENNLDNPAQETNNNLRHEKSTDKEV 687 >UniRef50_Q1NH25 TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25_9SPHN Length = 668 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 174/678 (25%), Positives = 312/678 (46%), Gaps = 32/678 (4%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKIS-WQTFVNGCIYWW 62 T+GGQ +RM +Q+ F +L G+ +W+ + W N Y Sbjct: 8 TLGSWTRGGQAIVHNVRMTTQV---------FFQTLLAGIAVWVGGTIWYVLENSTDYQR 58 Query: 63 CTTLEGMRDLIKSQ-----PVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAV 117 ++ + +KS PV G+ + + +L + + + V A Sbjct: 59 FVAVKIVEATLKSDVPGGAPVLFRTPSGRQYWTTSDALLGSRIAKKTLQAMEHHLVYGAA 118 Query: 118 VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL 177 +A L+ + R G+ N+ G + + + R+L + ++ IG + Sbjct: 119 LAGAFALLMLAWAWFYFTRTGRGLGSNQFLRGARF-GTARQLRRLLWRS-RNGSFAIGGV 176 Query: 178 PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKI 237 P+ E ++ + G G GK+ +I ++ + R++G ++YD +G FV+ +Y P+ D + Sbjct: 177 PVPDAFEPEHILICGAPGTGKTNIIVKMLDGMRKQGKRAIVYDTAGTFVEKFYRPNHDIL 236 Query: 238 LNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP 297 LNPLDAR W W + +D A + IP DPFW + R + Sbjct: 237 LNPLDARADCWSPWVDVPRDYHYDQIAESTIPE-KGGDPFWAKAARGTLVAVLRKLARHE 295 Query: 298 NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 S L++T+L ++ L ++ + AA + + ++T+ IRA L + +++ YL Sbjct: 296 RTLISVLLETVLRTPLKTLASFAEGTDAAAFISMEGDRTSAGIRAELASVMRSFSYLDD- 354 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 + F+IRDW+ ++ + WLFI+ AD SL+P++++WL IAI ++++ +R Sbjct: 355 --TADGFSIRDWV---ANEEDDSWLFITVKADQLPSLRPLVTVWLDIAISAIMSLPPDRK 409 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RR++ DELPTL KLP L + L ARK+GGC + G QSY QLE YG + AA++ + Sbjct: 410 RRLYCVIDELPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCS 469 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 T R+ A+ + +G+ E ++A+E SYG + +RDGV+ + + LV ++++ Sbjct: 470 TWVALRANDTPTAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRTQVTRPLVMHTEV 529 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR-----DINPEMENRLSAVLAAR 592 +LP+L ++ P V+ + +Y P F+ R ++PE E ++ + Sbjct: 530 TNLPNLAGFLRFGRNLPVVRFTDRYNVLPSPQAAFVERLVPPVRLDPEAEGESASKPSGS 589 Query: 593 EAEGRQMASLFEPDVP-EVVSGEDVTQAE-QPQQPVS-PAINDKKSDSGVNVPAGGIEQE 649 + R+ + P++P EV Q E PQ P S PA D + G Sbjct: 590 PPKRRRPKKMEAPELPLEVDDSRSPAQDEVSPQGPSSGPAEGDIGNADRGLPKLLGRASG 649 Query: 650 LKMKPEEEMEQQLPPGIS 667 +++ Sbjct: 650 FRLRQHGRASGDRNDARP 667 >UniRef50_A1WDH0 TraD n=3 Tax=Burkholderiales RepID=A1WDH0_ACISJ Length = 665 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 175/669 (26%), Positives = 295/669 (44%), Gaps = 23/669 (3%) Query: 2 SFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVL--WIKISWQTFVNGCI 59 +A ++G ++ + R+F ++ + IL GL + + T Sbjct: 7 KGSAGSFSRGAELWMHQARLF-----VVAIWTVVLISILAGLAVTTAYFWNATTADEKYA 61 Query: 60 YWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVA 119 L + E+ G+ +M ++V +E W + Sbjct: 62 LERNVLAHTRDALYMTAGKMELNVNGELRKMEVSEVAL--LTDEMAEDAWRKLRNGGMFG 119 Query: 120 LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI 179 L+ + F++S G+++ ++ G +L + K++AR+++ + S I +P+ Sbjct: 120 LLTSIGVVFLISLYWWGYGRERMQDNQLRGAKLVEG-KELARLIRHRDEASPYEIAGVPM 178 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILN 239 SE + G G GKS+ L R RG +++YD +GEF +++Y D ++N Sbjct: 179 RVKSETLHTLFAGAQGTGKSQQFFALMKQVRARGKRMIVYDPTGEFTQAFYREGKDILMN 238 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR 299 PLD+R W++W E FDN AN LIP + DPFW +GR + + ++ + R Sbjct: 239 PLDSRSPNWNIWNEIAKDYHFDNMANGLIPDPAESDPFWALAGRMVLKDVIAVLGREGRR 298 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 + L + + ++ + L+ + A V+ E+T +S++ + N ++A R+L Sbjct: 299 TNRDLYNAIAKSNLDAMHALLQGTAGATYVDPTTERTGMSLKMTVQNQLEAFRFLPD--- 355 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR 419 GE F+IR W+ + + W+FI++ +LKPV+S+W+ AI+ +L + R Sbjct: 356 EGESFSIRKWVHE----EGDSWMFITAREAMREALKPVLSLWIDTAIKAVLDLEPIHRER 411 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 +WF DELPTL KL L L RK+G C V G+Q ++QL +IYG A ++ T+ Sbjct: 412 LWFCIDELPTLQKLDILKLALTNTRKYGLCMVLGVQDFSQLYEIYGHDLAKTIISGCQTK 471 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 R A+ A +G+ E + E SYG RDGVS + + LV S+I + Sbjct: 472 LLLRVTDGAAAKLLAELMGQAEVDEKDETLSYGLSSQRDGVSVMARRQMRDLVLTSEILT 531 Query: 540 LPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQM 599 LPD+T Y+ +PG YP ++ Y K A FI RD + AA A Sbjct: 532 LPDMTGYLLVPGDYPIARVKYGYVPTEKQANGFIERDG--FAISFKPTTAAAAPAPAPSA 589 Query: 600 ASLFEPDVPEVVSGEDVTQAEQPQ-QPVSPAINDKKSDSGVNV---PAGGIEQELKMKPE 655 A + +P PE D + P V N D PA + + Sbjct: 590 AEVQQPAAPEQGDMLDDDDMDAPATVEVMRNENGDVIDKATGEIIKPAEKVSRAKDDADA 649 Query: 656 EEMEQQLPP 664 + Q P Sbjct: 650 KSAGQGKKP 658 >UniRef50_Q0HXY0 Putative uncharacterized protein n=1 Tax=Shewanella sp. MR-7 RepID=Q0HXY0_SHESR Length = 657 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 187/649 (28%), Positives = 306/649 (47%), Gaps = 17/649 (2%) Query: 6 KDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLV-LWIKISWQTFVNGCIYWWCT 64 D +G +M + I ++ + I+ GL+ LWI N Y W Sbjct: 10 GDFVRGADTWLHSQQMLLF-SGIWIFLPGVLLAIVGGLLYLWIDADKCVLQNTSTYLWAQ 68 Query: 65 TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL 124 L+G+ S V + ++ V+++ + +L +F A V+ L Sbjct: 69 -LKGLVQPFSSVTVGTCVALDGRESLPSSVVINEPLFQEAAVKLLKSFGWAFSSLFVLYL 127 Query: 125 ITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE 184 + ++GK+ E++ G +L + K +++K G SD+ +GD P+ Sbjct: 128 PIGVYLVVKAVKRGKEIKEDKYIRGAKLVSSEKLKGEIVEKHG-ASDLTLGDFPLPTGFS 186 Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDAR 244 ++ + GT GAGKS + L R RGD V+YD+ GEFV+ +Y +D ILNP D+R Sbjct: 187 KKHTLISGTTGAGKSTALTHLLKAIRARGDRAVVYDKKGEFVEMFYRDGVDHILNPADSR 246 Query: 245 CAAWDLWKECLTQPDFDNTANTLIPMGT--KEDPFWQGSGRTIFAEAAYLMRNDPNRSYS 302 W W+E ++ D D A TLIP DPF++ S R +F+ + D RS + Sbjct: 247 SHQWTPWEEMVSPFDADWIAETLIPESKSNGGDPFFRDSPRHVFSAVLQKLYLDGFRSLT 306 Query: 303 KLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 L+ +E L + +PA E EKT SIR+ L N V +R L+ + G Sbjct: 307 TLLQATAWSDLELLTELVAGTPAETHFSEGNEKTLASIRSTLVNGVLPLRLLKECDSRGF 366 Query: 363 PFTIRDWM-RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 F+IRDW+ +G + + WLF+ KP+IS W+ +GL+A G N +R +W Sbjct: 367 -FSIRDWIAQGDEQGADDSWLFLPVRESEIEIQKPLISTWIQSVAKGLMACGVNNDRTLW 425 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 DELP+L K+P L ++ E R FG V GIQ QLE+ +G+ + ++ + +T+ Sbjct: 426 IVVDELPSLKKIPALSMLMAEGRGFGAAVVLGIQEINQLEEEFGKNTSKTILGLCSTQLH 485 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 FR + AE+ + +GE E + E +Y AD +RDGV + + +V S+I LP Sbjct: 486 FRLNNADTAEWVSKVLGEAEREEVDEDLNYSADDIRDGVRVSSKRQNRKIVLPSEIMDLP 545 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 DL+C+ + G ++ + + PK+A FI D N + RL L A A + + Sbjct: 546 DLSCFAKIWGVESKARIDIPFLRLPKIADGFIQGDENETVGMRL---LNAARALKMEADT 602 Query: 602 LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL 650 F P G +V++ PA++D + + + G++ +L Sbjct: 603 DFAPKELSNKHGTEVSKG------QLPALSDIEQEVHSVLGTDGMDDDL 645 >UniRef50_B2I3X2 Type IV secretory pathway, VirD4 component n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X2_ACIBC Length = 719 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 184/708 (25%), Positives = 333/708 (47%), Gaps = 40/708 (5%) Query: 2 SFNAKDMTQGGQIASMRIRMF-SQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 + A + T+G +I + RMF S + N++++ L I I+ L+IK+ F+ + Sbjct: 6 NSKAIEFTRGSEIWIHQFRMFISSMMNVIVFGLMITIGIVCA-FLYIKLKDVHFLALSVQ 64 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + L+ + + ++ ++ + + ++ AQ + + Y ++ AF+L +++ Sbjct: 65 YDIW-LKSVFNNPDARVALKLNGVVRDYTLDQAQHIINPYFNQLKFYVFRAFILGILLSS 123 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 + + + GK+ +E G +L N + ++ G S +I ++P++ Sbjct: 124 FL----VGGLIYYWFTYGKEVMSDEQIRGSELVSNDALIYKIQSTKG-FSPYKISNIPMV 178 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 +++E N + G G+GKS++ R + R ++YD SGEF +Y P ID ILNP Sbjct: 179 KNTEGTNVGIFGAPGSGKSQIFRDHLSQVRNNKRKAIVYDPSGEFTSEFYRPGIDIILNP 238 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 D R W + E FD+ AN +P+ K DP++ +GRT+ AE + + S Sbjct: 239 FDERMPYWSPFFEIRHDEHFDSIANAFVPVEGK-DPYFGEAGRTVLAEVMRELHANGIHS 297 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 L DT+ IE++ + L + A+ V++K EKTA+++ + N ++A RYL + Sbjct: 298 NKTLHDTIAHFTIEEISSVLEGTAASKHVDKKAEKTALAVLTTVQNKLRAFRYLPD---S 354 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 G F+IRDW+ +++ W+F+S + +++P+I++W SI I+ ++ + + Sbjct: 355 GTQFSIRDWVS---RPEEDSWIFLSLREEQKTTIEPLITLWFSIFIKAVMNLEPIHRELL 411 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 W +CDE PTL K+ DL L RKFG C+ G+Q QLE+ YGEK A S+ + T+ Sbjct: 412 WMYCDEFPTLPKMDDLPLSLTNTRKFGLCHFLGLQDIPQLEEKYGEKIARSIISALQTKV 471 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 F+R ++ A+ + +G+ E + + S G + RDG S + +V S+I L Sbjct: 472 FYRVNENETAKRMSEILGQMEVAEKNMSRSMGVNDSRDGDSFITQRRERFIVLPSEIMKL 531 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA 600 PDLT Y+ +PG YP K++ KY K P FI R E +SA A E + + Sbjct: 532 PDLTGYLRVPGDYPVTKITQKYHPHLKNVPAFIER----ENMGFISAFAVAEALESQSNS 587 Query: 601 SLFEPDVPEVVSGEDV---------------------TQAEQPQQPVSPAINDKKSDSGV 639 EP V + + ++ P+ + + Sbjct: 588 DGKEPLVEQQNEEGNFFGNSTVPLVGNSSFFGKSNTTSENIYENSPLDLFHSQTEDSDLS 647 Query: 640 NVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHP 687 GI+ + + E+E + + + A E+ Q+N+ Sbjct: 648 LNEKNGIQPDEIIPDEDEKPKVVNNDRLHTFASYLAATDESSVQKNND 695 >UniRef50_B7JCL9 Conjugal transfer protein TraD n=11 Tax=root RepID=B7JCL9_ECOLX Length = 432 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 408/416 (98%), Positives = 415/416 (99%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MSFNAKDMTQGGQIASMRIRMFSQIANI+LYCLFIFFWILVGLVLW+KISWQTFVNGCIY Sbjct: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIILYCLFIFFWILVGLVLWVKISWQTFVNGCIY 60 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 WWCTTLEGMRDLI+SQPVYEIQYYGKTFRMNAAQVLHDKYMIWC EQLWSAFVLA+VVAL Sbjct: 61 WWCTTLEGMRDLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVAL 120 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 VICLITFFVVSWILGRQGKQQSENE+TGGRQLTDNPK+VARMLKKDGKDSDIRIGDLPII Sbjct: 121 VICLITFFVVSWILGRQGKQQSENEITGGRQLTDNPKEVARMLKKDGKDSDIRIGDLPII 180 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP Sbjct: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS Sbjct: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 YSKLVDTLLSIKIEKLRT+LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN Sbjct: 301 YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR Sbjct: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 >UniRef50_A4XE63 Type IV secretory pathway VirD4 components-like protein n=5 Tax=Sphingomonadaceae RepID=A4XE63_NOVAD Length = 776 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 176/731 (24%), Positives = 300/731 (41%), Gaps = 47/731 (6%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 M NA + T+G Q+ + M+ A + L F F I + +VL + + + V + Sbjct: 25 MPRNAGNFTRGSQLITHEFLMWFSSAKMPLLVWFFTFLIALSIVLALLL-HEHEVQMILM 83 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + + + G+ + + ++ +L A + ++L Sbjct: 84 RIYAEGWSFMEFSPRKILNLTLPSGRVIPAPVSMIASHPDVVIAWNKLMRAIWGSLFISL 143 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN------------------------- 155 + + + ++GK E G L D Sbjct: 144 FVAVPLSVWFIDLSRKRGKAILEERHQRGAMLVDAKELAAVINQHNSAALAQEIAERMPG 203 Query: 156 ------PKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYA 209 K K G I + SE + + G+ G GK+ +R + Sbjct: 204 KTMDDVMKMSFAERKAAGIHHVYNIAGVSFPWRSEQAHTIMIGSTGTGKTTQMRDMIAQM 263 Query: 210 RQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP 269 R R D V++D +G +V+++Y+P D ILNP+D RC +W L+ E DF A+ ++P Sbjct: 264 RVRQDRAVVFDLTGAYVEAFYNPETDTILNPMDERCPSWSLFDEGKNYADFTAIASAILP 323 Query: 270 -MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANL 328 G DPFW RT+F + + + + L L+ +E++ LRN+ A L Sbjct: 324 TDGGGSDPFWMLGARTLFVQTCVQLMKLGQATNAALAYRLMMADLEEVHELLRNTIAEPL 383 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNA 388 + A S+RAVL +A+ + I EPF+I DW+R D+ LFI+S+ Sbjct: 384 TAPVAARMAESVRAVLNTNAQALLF---IPEGKEPFSICDWIRHQ--DKPGSILFITSSH 438 Query: 389 DTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGG 448 + + ++S+W+++A+ L+ + R+ R WFF DE+ LH+LP + + L AR FGG Sbjct: 439 NELVLNRALLSLWMNLAVHTLMRLPRTRSLRTWFFFDEVHALHRLPAIEDGLQTARGFGG 498 Query: 449 CYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 +V GI S+A+L + YG++ A +L + T+ + AE + IG +E E Sbjct: 499 AFVLGIHSFAKLAETYGKEGAQNLASLARTKLILAAADRDTAEHCSDYIGHREVRMMDEA 558 Query: 509 YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 YSYG +RD + E Q LV DI LP L ++ P + A ++ L Y+ PKV Sbjct: 559 YSYGYSNIRDAATITPRSEVQPLVIPDDIMRLPSLRGFLVFPEGFDAARIRLTYKDYPKV 618 Query: 569 APEFIPRDINP--EMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPV 626 A +I R+ E + E GR + E + G D P Sbjct: 619 AEGYILRENVEPIEFISMPKGDDEVAETGGRDRSGEPELEPRGEDLGRDPAVPLSPALEP 678 Query: 627 SPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENH 686 + D P+ G + +++ + E+ + D + + Sbjct: 679 DANAPEIMPDGPNPDPSVGKQMAFRLEQAPQNER-------TNSREQDPSQKAEKSSASK 731 Query: 687 PDIQQQMQRRE 697 P Q+ + RE Sbjct: 732 PAAQRTVGSRE 742 >UniRef50_Q2G6A0 Type IV secretory pathway VirD4 components-like protein n=7 Tax=Sphingomonadales RepID=Q2G6A0_NOVAD Length = 798 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 173/731 (23%), Positives = 296/731 (40%), Gaps = 53/731 (7%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 M N + T+G Q+ FS + L I +++ W IS + Sbjct: 1 MKRNLVNFTRGSQLLGH----FSFMFAAGLKGPLIVAALVISWTSWWTISAGLTDHEVYL 56 Query: 61 WWC---TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAV 117 W + G + ++ + +G T + AQ+ ++ E+L + A Sbjct: 57 VWMRIYAAIYGFMEFDAAKRITLETAFGATIQFPIAQLESYPPVVHAWEKLTALLTSALW 116 Query: 118 VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS------- 170 + + + F V W R G + E + G L P+ V + + ++ Sbjct: 117 RSGFLLVPVFAVFYWFAERFGGRSKERKHERGAMLVTLPELVDELTAHNRRERTRELDSA 176 Query: 171 --------------------DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR 210 I + E + L GT G GK+ I + AR Sbjct: 177 LGWKWRLSLPREIARVFPYRPSHIATVSYPWRLEQSHAMLIGTTGMGKTVAISDMIAEAR 236 Query: 211 QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP- 269 +G V++D +G F++ ++ D ILNPLDARC W L+ EC ++ +F A+ L+P Sbjct: 237 AKGQRCVVFDLTGAFIEHFHAAHCDIILNPLDARCPQWSLFDECRSEGEFWAAADALVPH 296 Query: 270 MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV 329 G E FW + R +F E + + + L L++ + ++ +R + A L Sbjct: 297 DGGGEAQFWVIAARALFVEFCLKLVAEGRATNDALARELMTADLSRVHAMMRGTIADPLT 356 Query: 330 EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRE--DQKNGWLFISSN 387 + + A SIRAV KA++ L G F++R W+ + + LFIS+ Sbjct: 357 APEAARMAESIRAVFNVNAKALKLLPTA---GPRFSVRQWIEDGADSATSEGSILFISAR 413 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + ++++WL A+ L+ M R+ + WFF DEL LH+LP L + L AR FG Sbjct: 414 YVDMSVCAQLLTLWLDTAMNTLMTMPRTRDLKCWFFVDELGALHRLPALEKGLQTARNFG 473 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 G V G+ +YA+L+++YGE A +L + T+ + + A + + IG ++ E Sbjct: 474 GAIVLGLHAYAKLKEVYGENMAMTLASLARTKLILGTADRETATWCSDFIGHRQVRDMEE 533 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 Y+YG + RD VS + L+ + +LP L+ Y+ P +PA + LK RPK Sbjct: 534 GYTYGYNNARDAVSLTPRKHIEPLLLPDQLMNLPRLSGYIKFPDGFPAAPIKLKPVDRPK 593 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 A FI R ++ A + Q P E S D + Sbjct: 594 RAETFIAR-----VKESPKARVTVPHPAAEQAEQKAAPTGSEHPSSNDDGAGKPVVPKQG 648 Query: 628 PAINDKKSDS----GVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQ 683 D+ + + PA I + ++ P + +++ P S D A +Q Sbjct: 649 ELALDQGPKAAPRQEPDAPAKDIGRAVEHPPGKTSKEREPAARSGQ----DKAGKARKEQ 704 Query: 684 ENHPDIQQQMQ 694 N + + Sbjct: 705 SNTRTDARARK 715 >UniRef50_A3VMZ9 TraD n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VMZ9_9PROT Length = 679 Score = 431 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 163/663 (24%), Positives = 295/663 (44%), Gaps = 28/663 (4%) Query: 1 MSFNA----KDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVN 56 MS NA K +GGQ+ +RMF Q+ + + + ++ + + + + Sbjct: 1 MSGNASGPFKTFLRGGQVTLHTLRMFGQVMRFLSFAMVSLMLVIAWAGVMVNTAPEDRHY 60 Query: 57 GCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAA 116 + +S + G +L + ++ + Sbjct: 61 AMKRYEAWAYRAA-GFRESLELNMRTADGSHAPFPIGTILTHPAVAEHEKRFRRQLFVWG 119 Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNP----------KDVARMLKKD 166 + + F +++ + +G + V G + + A K+ Sbjct: 120 RIGGLGGGFGFLLLTGLFVGRGSTLTRTNVKRGAAMASAQELKAQIGAHNRWTAMKRKEL 179 Query: 167 GKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV 226 + +P SE+Q+ + GT+G+GK++ I L + R+ GD V++D +G F+ Sbjct: 180 RGRPRYALAGIPYPVGSEVQHTGISGTIGSGKTQAIAALLDQIRKAGDRAVVFDLTGGFI 239 Query: 227 KSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIF 286 +Y D ILNPLD R AW ++ E T+ FD A +IP K DP W S R +F Sbjct: 240 APFYREDRDTILNPLDRRAPAWSVFDEAKTKAGFDAIAAAMIPRAQKADPVWADSARMVF 299 Query: 287 AEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTN 346 + A L+ D S +LVD LL+ ++ L + +PAA+++ + S+R +L+ Sbjct: 300 STAGQLLLGDGRASNKELVDLLLNAELRTLAPFFAGTPAASIISADTPRMTNSVRMMLST 359 Query: 347 YVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI 406 Y+ +R L G+ F+I +W+ D+ LF+SS AD H +L+P++++W+ A+ Sbjct: 360 YLDGLRLL---PSRGDRFSITEWIEN---DRAGSTLFLSSRADMHETLRPLLTVWMDTAV 413 Query: 407 RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGE 466 R L++ + NRR+WF DE+ L +LP +++ L R+FG +V GIQ+ +QL DIYG Sbjct: 414 RALMSRPRDPNRRIWFIMDEVAALQELPSIMDGLARGRQFGAAFVLGIQAQSQLRDIYGP 473 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 A +L V T+ + A++ A +G +E +++E S+GA+ +RDGV + Sbjct: 474 DGAQTLSSVCRTKLILAASDADTAKWYADFLGRQETSRSNENVSFGANTIRDGVMLARQE 533 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLS 586 + LV +I +L L Y+ +P +P K+ + R P F+PR+ + R Sbjct: 534 RIEHLVIPEEIMNLRSLEGYLKMPEGFPLAKVKVPLVLREDREPAFLPREDQGLLITRAR 593 Query: 587 AVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGI 646 A + + P G+ +E + + I+ + G+ Sbjct: 594 APHTVKAMQATA-------HRPGSEDGQRDMFSEAERDGIDELIDPDTGEVSATTRVEGV 646 Query: 647 EQE 649 Q+ Sbjct: 647 AQD 649 >UniRef50_A0B526 Type IV secretory pathway VirD4 components-like protein n=3 Tax=Burkholderia RepID=A0B526_BURCH Length = 702 Score = 430 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 185/675 (27%), Positives = 297/675 (44%), Gaps = 13/675 (1%) Query: 7 DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTL 66 ++G + + ++ + ++ + + G L+ S +T + L Sbjct: 12 TFSRGTALWWQQAKLLTSAIVAVVIAAILVGALAGGAYLYFVTSAETRYLTIKHVEAEIL 71 Query: 67 EGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLIT 126 + + P + A L + +++ + AA+ A++ + Sbjct: 72 TVVP---MANPNVSFHLGNDDTALPPAAALS--FTEDAADEFFIYARNAALYAVLTAIAV 126 Query: 127 FFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQ 186 F+ G+ + ++ G +L K++ + L+ S RI +P+ + +E+ Sbjct: 127 TFLSVLFWMEYGRGKLTDKQVRGAKLVK-AKELIKELEARDDASPYRIAGVPMRKKAEVL 185 Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCA 246 G G+GKS+ L + R R ++YD SGEF +YY D ILNPLDAR Sbjct: 186 GTLFSGAQGSGKSQQFFALMDQVRARKKRAIVYDPSGEFTAAYYREGKDVILNPLDARSP 245 Query: 247 AWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLV 305 W+ W+E ++ +D A LIP+ DPF+ +GR +F A + D R+ + L Sbjct: 246 NWNAWREIQSEIHYDGLAEGLIPIPPNVADPFFAIAGRMVFKGAIRALGGDNKRTNAALY 305 Query: 306 DTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFT 365 + +E+L L N AA V+ E+T +S++ + N + RYL GEPF+ Sbjct: 306 KAIAHSNLEELHAILANESAATYVDPVTERTGMSLKMTVQNQLDCFRYLHD---EGEPFS 362 Query: 366 IRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCD 425 IR+W++ ED WLFI+ N + +L P+IS+W IAIR LL + R+W+F D Sbjct: 363 IREWIQNEDEDDD-SWLFITVNEEQKTALLPLISLWCDIAIRSLLTLKPIHRERLWYFYD 421 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 ELPTL KL + + RK+GGC+V GIQ ++QL IYGE A ++ T+ R Sbjct: 422 ELPTLQKLEIMKLAVTNIRKYGGCFVLGIQDFSQLFQIYGEHLARTIISGCQTKLLLRVT 481 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 A+ A IG+ + + E + G D RDG+S + LV S+I LPD+ Sbjct: 482 DGDAAKALANAIGQADLDEKEESLNLGIDERRDGMSVFARRNLRDLVLSSEILHLPDMQG 541 Query: 546 YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP 605 Y+ P YP ++ +Y P+ FIPR +A E RQ +L P Sbjct: 542 YLVTPSDYPVARVKYEYVPHPQTVTPFIPRQTYDLWLPAGAAADRPAAPE-RQSTALPSP 600 Query: 606 DVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPG 665 P G D + + P S A DS N + G + Sbjct: 601 PSPTARFGSDPSPSHSPSPNPSGAPTTAAEDSATNAASAGPAVGAPAPNTSGCVARPSNV 660 Query: 666 IS-ESGEVVDMAAYE 679 IS +GE+VD E Sbjct: 661 ISLSTGEIVDGDTGE 675 >UniRef50_B0RKL6 TraD n=2 Tax=Yersinia RepID=B0RKL6_YEREN Length = 690 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 170/680 (25%), Positives = 301/680 (44%), Gaps = 23/680 (3%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWC 63 + ++T+GGQ + +RM QI + + + +++ + + +S +T + + Sbjct: 10 SLVELTRGGQTLTHFLRMLYQILSRYIKI-VLLAYVIGSVGIGYFLSSETDLKMGSQYAI 68 Query: 64 TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC 123 + L K+ I GK+ + Q++ M E + L A+ +L + Sbjct: 69 SAFRVEYLLDKNVKTQLILPSGKSVTVTHGQIVSSPTMKNHFEIIKGKIYLGAIASLFLS 128 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV---ARMLKKDGKDSDIRIGDLPII 180 + + L ++GK +++E G + + + + LK S + ++P++ Sbjct: 129 ALVAVFLFRYLRKRGKNDAKDEHIRGAAIGNKEELISAVKEKLKTAHLPSRYSLNNVPLL 188 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 E + L G+ G GKS VIR + R D VIYD SGEF K +Y D ILNP Sbjct: 189 PAQECTSILLAGSPGVGKSTVIRDILRQGRIHNDKAVIYDISGEFTKRFYRKGFDVILNP 248 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN-R 299 D R +W LW E + ++ + IP K DPFW + + +F+ + N Sbjct: 249 FDKRTHSWTLWNEGRNEIAYNRLSQAAIPPVDKGDPFWSMAPQLVFSSIMDELGNRSETP 308 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 S+ L++ +L + +KL + + A + +EK A S+RAV+T Y + ++YL + Sbjct: 309 SHEHLMNIILRMSDDKLAQVVAHQDARTVFNLDVEKMAGSLRAVITAYTRNLKYLSHM-- 366 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR 419 G F+ RDW R + + W+F++ D ++ ++MW+ A +L++ + RR Sbjct: 367 TGPQFSFRDWARNEDDRR---WVFLTVRDDLKVTMMSALTMWIESACSAILSLEPSDVRR 423 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 + DE+PTLH +P L++ RKFG + G QS +QL + YGE +L D Sbjct: 424 ILCAFDEIPTLHPIPSLLDFSGTGRKFGAVPILGFQSNSQLLEKYGEHRTKTLTDAAGVF 483 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 F A + A ++G E +A+E +S GA VRD + + + + L+ YS IQ Sbjct: 484 MGFSIKGSDGASWIAKQLGNSEIEEATENFSIGAADVRDTTNVNRTTQERELLLYSQIQG 543 Query: 540 LPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD------------INPEMENRLSA 587 L DL C + + P KL K+ P +A D I E + + + Sbjct: 544 LEDLHCLIRMGNGLPVTKLEYKHDNMPTIANAIEETDIFKAQTFQTEFHIEKETDAKSTV 603 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIE 647 + A+ + L + + + + +Q S + + N P IE Sbjct: 604 EGVIKHAKANNINDLLSWEAHKAIKEKQDAARKQATTGNSSTTDSDSENKPFNSPQNKIE 663 Query: 648 QELKMKPEEEMEQQLPPGIS 667 + + K EE+ + P I+ Sbjct: 664 EAI-SKAAEEVNKNASPSIT 682 >UniRef50_Q6MB84 Putative conjugative transfer protein traD n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB84_PARUW Length = 556 Score = 421 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 174/566 (30%), Positives = 281/566 (49%), Gaps = 18/566 (3%) Query: 5 AKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCT 64 + +T+GGQ+ + +RMF Q+ + F+ WI+V L ++ N + Sbjct: 4 FQTITEGGQLTTHSVRMFKQVTKTSFFITFVL-WIIVFLYQMRDVNTFYLQNVLYFEQAR 62 Query: 65 TLEGMR-DLIKSQPVYEIQYYGKTFRMNAAQV---LHDKYMIWCSEQLWSAFVLAAVVAL 120 + + D IK P + +Q + + L Y F +A AL Sbjct: 63 FYQVLHIDTIKVDPSFGLQRGSQDVKEYTTDQVLRLTKPYADRFYRITKQRFQHSAFWAL 122 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 + F + + +G+Q + G L+ + LK + S I IG LP+I Sbjct: 123 APLSVVFAIFFF----RGRQSIKKHHLKGNTLSSVWLTRWK-LKLSRRASPISIGSLPLI 177 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 + +E Q+ + G G+GK+ + L RQ+ +I D +G + YY D +LNP Sbjct: 178 KGTETQHIMITGGTGSGKTNCLHHLLKSVRQQKQRAIIVDTTGLLTERYYRAGKDILLNP 237 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRNDPNR 299 LD+R A W W EC+ + + A + IP + D +W+ S R + +++ + Sbjct: 238 LDSRGAPWHPWIECIDKTSYATMAESFIPQSLSDSDNYWRTSARIVLGSLFEQLKD--IQ 295 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 S L D +L +++L +++ + AA+L++ EKTA SIRAV++N++ L + Sbjct: 296 KNSTLADKILRDPLQELCDFVQGTKAASLIDMNSEKTAASIRAVMSNFLTCFELLANTDQ 355 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR 419 PF+IR+W++ WLFIS + A+L P++S WLS+A+R LLA+ N RR Sbjct: 356 ---PFSIREWIQQEDPIDN--WLFISCKTNERAALNPLLSCWLSVAVRSLLALPPNFERR 410 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 +W+ DELPTL++L DL +L E+RK+GGC V +QS AQLE IYG+ A +L T+ Sbjct: 411 LWYIIDELPTLNRLRDLDMLLAESRKYGGCAVLALQSPAQLEAIYGQAVAQTLIGNCATK 470 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 F + A A GE+E + + SYGA+ +RDGVS + Q L++ +DIQ Sbjct: 471 IVFAEQNPLHAGRLADMFGEQEIREYQKGLSYGANDIRDGVSLNQQTRYQQLITKTDIQF 530 Query: 540 LPDLTCYVTLPGPYPAVKLSLKYQTR 565 L +V LP P V+L++ R Sbjct: 531 LSRNQAFVRLPDNCPIVRLNVPILPR 556 >UniRef50_D0SGZ6 Type IV secretory pathway protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGZ6_ACIJO Length = 657 Score = 418 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 165/653 (25%), Positives = 297/653 (45%), Gaps = 17/653 (2%) Query: 42 GLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYM 101 GL L++K+ N Y T LE + P EI+ + + ++ + Sbjct: 2 GLFLYLKVD-----NTQFYAIKTELEIAYKSTLNVPNKEIELFINGVPEKVSIKEAEQII 56 Query: 102 IWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR 161 W A A ++ L++ + + W G+ E+E G +L + K + Sbjct: 57 EPYLSSFWWAVERALLIGLILSISIVGGLIWYWYNYGRDVMEDEQLRGAKLVEKEKLI-E 115 Query: 162 MLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDR 221 +L + + + I +PI + +E N C G +GKS+ IR L R RG V+YD Sbjct: 116 LLNQRDEANHYTIAGVPIRKGTEGNNICCVGAPQSGKSQAIRALLAQIRARGKKAVVYDP 175 Query: 222 SGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGS 281 SGEF + ++ D ILNP D RC W +W E D+ + LIP+ D F+ + Sbjct: 176 SGEFTQEFFREGKDIILNPFDERCPQWSVWNEVEEDHHIDSIGDGLIPITPTGDQFFPPA 235 Query: 282 GRTIFAEAAYLM-RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISI 340 R + ++ ++ +N+ ++ +L +++ +++L L + A V+ K EKT I+I Sbjct: 236 ARRLISDVIRVLGQNEATKTNKRLFESISLSTLQELHEMLAGTSGATYVDPKTEKTGINI 295 Query: 341 RAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 + + NY+ R+L+ GE F+IR+W+R + + W+FI++ + ++KP+IS+ Sbjct: 296 KMQILNYLTPFRFLKD---EGEKFSIREWVRE----EDDSWVFITTKEEQKEAIKPIISL 348 Query: 401 WLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 W+S I+ +++ R+W DE+PTL K+ DLV L RK+G C++ G+Q ++Q Sbjct: 349 WISTVIKATMSLPAIHKERMWLCIDEMPTLQKMDDLVLSLTNTRKYGLCHLIGLQDFSQS 408 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 YG+ ++++ + T+ R AE + IG+ E + + S G RDG Sbjct: 409 VHTYGKDVSSTIISTLQTKLILRVTDSDSAEKLSKIIGQMEVDEKNMSRSMGVTDGRDGD 468 Query: 521 STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDI--- 577 S + + +V ++I +LP+L Y+ + G YP K+ +Y K + FI R Sbjct: 469 SFYGQRKERNVVMAAEIMNLPNLVGYLKIVGDYPVTKVITEYVPHTKNSEPFIARKKAYN 528 Query: 578 NPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDS 637 + + LA EA+ +Q S + E + E++T Q +S SDS Sbjct: 529 EEVVSELTNVNLAQEEADRKQKESAIVQNTEEKLEDENLTIDSPVIQNISDESVVVDSDS 588 Query: 638 GVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQ 690 ++Q+ + E + D+ + + + Q Sbjct: 589 ESKTETLVLDQKTGDGEDSEQLLCDEKLAKDQNLSNDIVVNKDDKSKVVNAYQ 641 >UniRef50_Q1N8W8 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8W8_9SPHN Length = 762 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 165/735 (22%), Positives = 310/735 (42%), Gaps = 52/735 (7%) Query: 3 FNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWI--LVGLVLWIKISWQTFVNGCIY 60 NA D T+G Q+ ++MF + + Y + F + + L++W +Y Sbjct: 25 RNANDFTRGSQLFVHELQMFGEGLKVPFYIILSIFALSAVTALMIWYSHKEFYLAFMRVY 84 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + + +PV GK V + +L + + + ++ Sbjct: 85 SALWSYF---EFDPEKPVELHLLNGKIGHTTMQYVSLVPEVRQSWNRLLNVLFSSFMFSV 141 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTD-------------------------- 154 +I ++G + ++ G L D Sbjct: 142 MIGYPASIWFVQHSKKRGNEILQDHHERGALLVDQTILDTNVRSYNSRQAFVEWEREDPA 201 Query: 155 ------NPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANY 208 K R ++G + LP +E+ + G+ G+GK+ + + Sbjct: 202 NRTAAKWAKMSNRERHQEGVHFPYLLAGLPYPYKTEMAHTMFIGSTGSGKTVQMLTMIEQ 261 Query: 209 ARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI 268 +++RG+ V++D +G++V+ +Y+P D ILNP D RC +W ++ +C + AN L+ Sbjct: 262 SKKRGNKAVVFDLTGQYVERFYNPETDIILNPFDVRCPSWTIFNDCPGYVEMTAAANALV 321 Query: 269 P-MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN 327 P G +PFW + RT+F E +R++ + + L++ ++ + LRN+ A+ Sbjct: 322 PSDGGTGEPFWVQAARTLFVEMCEKLRSEGRTTNRDIARRLMTADLKTIHESLRNTIASP 381 Query: 328 LVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 + + + A SIR+ +A+R+L G+ F+I +W+ D LFISS Sbjct: 382 ITSTEAARMAESIRSTFVTNAQALRFLPDA---GKRFSITEWL---ASDVPGSTLFISST 435 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + ++++WL IA++ LL M R R WFF DE+ LH+LP + L AR +G Sbjct: 436 YSDLQLTRQLLTLWLDIAVQRLLIMPRTRQLRSWFFFDEIHALHRLPAIENGLQTARGYG 495 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 G +V G+ S+ +L + YGEK+A +L + T+ + AE + IG +E + E Sbjct: 496 GAFVLGLHSFDKLAETYGEKSANTLAALARTKLILTTADTTTAETCSAFIGSREVRQMDE 555 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 YSYG +RDG + + + LV D+ +LP L+ YV +PA ++S ++ P Sbjct: 556 GYSYGISKMRDGSTVTPTTKVEPLVLPDDLMNLPSLSGYVKFAEGFPAARISYPFKDWPV 615 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 AP F+ R + + A+ E + PD G ++ +Q + Sbjct: 616 QAPGFLRR----QNIRPIEAMYELGRTEQTANSFGTPPDA--NAEGGLTSKPDQLIGVPT 669 Query: 628 PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQ-ENH 686 A++ D + + E++ + P E+M ++ ++ ++ + N Sbjct: 670 DALDIMGGDDNMPLFEEY-ERQQREAPVEQMRGNAEERRTDPETTLEQQQSDSSRDHANQ 728 Query: 687 PDIQQQMQRREEVNI 701 D + E + Sbjct: 729 TDFARDRTSSERAQL 743 >UniRef50_C4Z014 Putative conjugative transfer protein TraD n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z014_9RICK Length = 659 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 173/654 (26%), Positives = 287/654 (43%), Gaps = 40/654 (6%) Query: 7 DMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY------ 60 D T+GGQI ++RMF Q+ + + F+ +LV + + Y Sbjct: 4 DYTRGGQIFIHKVRMFRQVIGVSSFWSFVIAALLVIFLTMPQYKAINMFAAKTYMRASFI 63 Query: 61 --WWCTTLEGMRDLIKSQP---VYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLA 115 W T + D + +P +Y++ + + A +L+ L V Sbjct: 64 DFVWDITPKISEDSKQREPRIDIYDMSIDRASRSVKVATILNTPKYKQSYMILKHYIVST 123 Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 A++A + F+V + + GK + G + +V + LKK IG Sbjct: 124 ALLAAGSTVFLVFLVFVVWSKFGKTARATKHISGSTI-KTASEVKKYLKKHNLIGMFYIG 182 Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI- 234 D+P+I+++E ++F + G+ G+GK+ +I L R ++ D++GE ++ YYDPS Sbjct: 183 DMPLIKNTETRHFLVTGSTGSGKTNLINTLLPQVRTAKHPAIVVDQTGEMIERYYDPSRG 242 Query: 235 DKILNPLDARCAAWDLWKECLT-------QPDFDNTANTLIP-----MGTKEDPFWQGSG 282 D I NPLDAR +WD W++ + P + A L G+ D FWQ S Sbjct: 243 DIIFNPLDARSHSWDFWQDATSNVAIGEVDPRLEKFAKVLFSFDKRSTGSGNDQFWQNSS 302 Query: 283 RTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRA 342 +F + R+ + L L + + L + L+ + AA ++ TA SI + Sbjct: 303 EILFISCVESLIKKDCRTITSLKKILTKVNRQDLASLLQGTRAARYFSKQNTTTAESILS 362 Query: 343 VLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 V+T V+ I LQ + + F+++ + + E N WLF++S+ P+++ L Sbjct: 363 VMTTGVRPICLLQD---SKQQFSLKQYFYNI-EKGSNSWLFLASSPSQREVTLPLLACIL 418 Query: 403 SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 +A+ L+ G N RR+WF DEL +L +L L +L E+RK+GGC + QS QL D Sbjct: 419 ELAVSYLIESGINEQRRMWFVIDELASLGRLNSLSSLLAESRKYGGCVMAATQSLNQLFD 478 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 YG A ++LFD T+ FRS A G E+ + SYGA RDGVS Sbjct: 479 KYGHYAGSTLFDQFATKFMFRSTDPSTARLITDIFGNVEYASQQKNTSYGAHEHRDGVSY 538 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPG-PYPAVKLSLKYQTRPKVAPEFIPRDINPEM 581 + +R++L++ +DI SL DL C+V LP KL L ++P ++ E Sbjct: 539 TEQEKRKSLITTNDIASLKDLECFVGLPDPQIRITKLQLSPAQVEHKNKGYVPLSLSEEA 598 Query: 582 ENRLSAVLAAREAE----------GRQMASLFEPDVPEVVSGEDVTQAEQPQQP 625 + + + D+ E+ E + E Q Sbjct: 599 ALEQALKEKVQSHDVDTDNTQLGSMASTGHDINDDINEISDAESEAELEHTQPS 652 >UniRef50_D1RMM8 Type IV conjugative transfer system coupling protein TraD n=2 Tax=Legionella RepID=D1RMM8_LEGLO Length = 665 Score = 413 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 196/659 (29%), Positives = 333/659 (50%), Gaps = 23/659 (3%) Query: 4 NAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGC----- 58 N GGQI + +M Q++N + + + F +L +++ S + + Sbjct: 8 NMWQFMSGGQIFDYKTKMMIQVSNRIFHWAVLGFVVLFSMIMAFYASSELKLVALHHISR 67 Query: 59 IYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVV 118 E + + +Y K+ + A+ L E +W ++ + Sbjct: 68 FLVKFHNGEYVLWTNLNGSKITAFFYQKSPLIQASVHLAQ-------ETIWRKAQISLIF 120 Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKD-SDIRI-GD 176 + L+ + S + G++ ++++ G +L D+PK+ + + + + SDI++ Sbjct: 121 GGAVYLLITLLFSRFFIKLGEKYTKDQFISGTRLADSPKETIKSVNESQRGASDIKLLNR 180 Query: 177 LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDK 236 LP+ + SE Q HGT GAGK++ + L R G+ +IYD+ ++D ID Sbjct: 181 LPMPKFSEKQGMLFHGTTGAGKTQAMMMLLEQIRALGEPAIIYDKECTIKPYFFDERIDV 240 Query: 237 ILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRN 295 LNP+ CA W +W+EC +F + A LIP DPFW S RTIF A+ +R+ Sbjct: 241 ELNPVSKLCANWKMWRECANPLEFGSFATYLIPKSVQGSDPFWVDSARTIFTSMAWKIRD 300 Query: 296 DPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQ 355 + L+ LL+ +E++R L+ + + NLV ++IEKTAISI++VL Y KA+R+L+ Sbjct: 301 YAEKDPVFLLQLLLTTSLEEIRNILKGTESENLVSKEIEKTAISIKSVLATYTKALRFLE 360 Query: 356 GIEHNG-EPFTIRDWMRGVREDQK--NGWLFISSNADTHASLKPVISMWLSIAIRGLLAM 412 G+E +G E F+I++W+ + +K GWLFI+S + H +KP+IS+WL +A++G+ ++ Sbjct: 361 GLEKSGKEDFSIKEWIENTADPKKYNKGWLFITSRSKYHKEIKPLISLWLGLAMQGVQSL 420 Query: 413 GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 N R+W DEL +LH+L + + L + RKFGGC GIQS AQL+ IYG A ++ Sbjct: 421 VANNKGRIWLVMDELASLHRLETISDTLADIRKFGGCVAIGIQSIAQLDFIYGTHEAGAI 480 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 D++NT +FRSP K+A++ + ++G + + E SYG D VRDG + G ++ V Sbjct: 481 ADLLNTSIYFRSPKSKVAKWVSEDLGPQVINEMKESQSYGPDSVRDGNTVGSQRTKRNTV 540 Query: 533 SYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAR 592 DI +L D+ CYV L G +P +L +Y R ++ I R IN + +++ Sbjct: 541 EEGDIMTLDDMECYVRLVGNHPITRLKNQYIERKEICVPLIERTINFDALEKVNHRALMV 600 Query: 593 EAEGRQMAS-----LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGI 646 + ++ FE EV + V +P A +K + + I Sbjct: 601 QNNPQRSDDVKKIHQFETLAHEVSDKDLVPPESPYAEPQDQAATNKNDIDAIELREASI 659 >UniRef50_Q3HKI7 TraG n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3HKI7_RHOS4 Length = 760 Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 163/629 (25%), Positives = 287/629 (45%), Gaps = 26/629 (4%) Query: 5 AKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCT 64 +GGQ RM +Q+ L+ F + ++ + W T Sbjct: 9 PTQFVRGGQTTQHWWRMAAQVVRTSLFVALAAFTLTYTALVLANYELRYMRETFASW--T 66 Query: 65 TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL 124 +R + + + + + A Q+ D M +++ L A ALV Sbjct: 67 AHYNVRLGRPEKIISYVDHLDRRLERTAGQIAADHRMNALADEYRRNASLFAWYALVPAA 126 Query: 125 ITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD------------GKDSDI 172 + + I G++ +NE G +L D +D+AR + K Sbjct: 127 AALLISTAIFAWAGQRVGQNEHVRGSRLIDQ-RDLARWSMRKWKAYQKRFGLGLKKGPRY 185 Query: 173 RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP 232 I +P ++ + GTVG GK+ I+ L R + +IYDR G V+ +YDP Sbjct: 186 TIAGIPFPPNAVEAQTGIFGTVGVGKTNAIKELLTTIRAQNGRAIIYDRMGGLVRDFYDP 245 Query: 233 SIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK-EDPFWQGSGRTIFAEAAY 291 + D I+NP DAR W + E T A +IP DPFW + R +F +A Sbjct: 246 ATDIIINPFDARSHIWSPFGEASTPEALAQIAEVMIPQRPGQNDPFWSQTARLVFEYSAR 305 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 + + + L +++I E+L L +P A+ + +EKT+ SIRA N + + Sbjct: 306 SLLRAKRPTNADLRRAIMTISAEELEKLLAGTPGAHFFGKHVEKTSASIRA---NMIAEL 362 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 R+L+ + +GE F+ R+W++ ++ G++F++ +A+ A+ + +IS + ++ L+ Sbjct: 363 RFLEFLRDDGELFSAREWVKS----ERPGFVFLTGDAEHSAATRNIISTIIEVSANALMT 418 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 E+R+ +VWFF DE+P+L++LP L L E R+FGG +V G Q +AQLEDIYGEK A + Sbjct: 419 CEESRDPKVWFFLDEVPSLNRLPFLQSKLAEIRQFGGAFVLGYQVFAQLEDIYGEKGAQA 478 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 + +N R F +P + A+ + +G ++ ++ E S+GA RDGV+ + + Sbjct: 479 IAGNLNNRIVFNTPDARTAKLFSESLGFEDVVEQRENLSFGAHESRDGVAFMSQRTERPI 538 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD---INPEMENRLSAV 588 V+ S+IQ+LP + P ++ + A + +P + + A Sbjct: 539 VTASEIQALPQFEALIRFAYDAPTARVRFEPVQVEPKAEKIVPYQGGGFALDAMDPHKAP 598 Query: 589 LAAREAEGRQMASLFEPDVPEVVSGEDVT 617 A A+ +A+ + P++ V E Sbjct: 599 APAPAADEASLATRYAPELLGKVQEERRA 627 >UniRef50_C5SIG6 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIG6_9CAUL Length = 871 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 135/579 (23%), Positives = 253/579 (43%), Gaps = 26/579 (4%) Query: 140 QQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS 199 +S+ ++ + ++ + ++ RI + + +S Q+ + G+ G+GKS Sbjct: 283 AKSDADIVHDLTIRARAAGLSDIYERFSDYEHHRIVGVELPINSLYQHSLVVGSPGSGKS 342 Query: 200 EVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPD 259 + I L R + +IYD E+++++Y D ILNP D+R A+W + + Sbjct: 343 QAIHGLIESINHRRECAIIYDPELEYIRAHYKAGRDVILNPFDSRTASWSPFNDLADYAS 402 Query: 260 FDNTANTLIPMGTKE-DPFWQGSGRTIFAEAAYLM-----RNDPNRSYSKLVDTLLSIKI 313 ++ A L P+ DP+W + R I+ A Y + ++ + + + L+ Sbjct: 403 WEQAAADLFPLPKGSQDPYWTLASRQIYCNAGYKLGVIKRQHFNEKPTIEELIWLIIGDF 462 Query: 314 EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGV 373 E L +L+N+PA + EK + S+R+V+ N + + +L E F+I +W+ Sbjct: 463 ETLHYFLKNTPAERTLGEKEGLRSESLRSVIVNGITRMMHLLN---GREDFSIAEWI--- 516 Query: 374 REDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV-WFFCDELPTLHK 432 Q +G LF+S ASL P+I+ W SIAI L +++++ DE +L K Sbjct: 517 NSPQTHGLLFLSRPQHLEASLSPLIAHWSSIAITTLFTRTPAQSKKITHIILDEFHSLGK 576 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 + L + RK+GG + G+Q +QL+DIYG+K A ++ + T+ R A F Sbjct: 577 VEILADAPARLRKYGGSIIMGMQQVSQLDDIYGDKKAQTIIGQLATKLILRCQDPDTARF 636 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG- 551 A +IG++E + E SYGA +RDGVS + + + +I + P + + Sbjct: 637 MAEQIGQREVSRTQENTSYGAHQLRDGVSLNTKEQTEFVFMPEEIMNFPMFQGVLRVSNV 696 Query: 552 ----PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAARE--------AEGRQM 599 P+P + +Y+ R F+PR ++ + ++ + Q Sbjct: 697 REGRPFPVAPVKFRYRERSTGTEGFMPRLGPDPIDEFMKKDRSSSKLYALLDKIKAEGQG 756 Query: 600 ASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEME 659 A E ++ S V+ + A +D+ D+ GI + E + Sbjct: 757 ADNREVTAQDLSSSRSVSTPDGKSVSSGAAHSDEGFDAQNPEKRAGIAEGFLAPDATEAK 816 Query: 660 QQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREE 698 +++P ++ V + A + QQ + EE Sbjct: 817 REVPDSEIDTRPVAEEGARSQPSPSDTTAAQQNSKSDEE 855 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 2/164 (1%) Query: 8 MTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLE 67 +GGQ S + M +IA L + + + + + + G + L Sbjct: 16 WLRGGQTVSHTVEMVWEIAKKFL-IMLALWGVFCIYSVNRHATDDEQLYGGL-AIVAKLC 73 Query: 68 GMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITF 127 Q V Q G + ++ + Y+ ++ A ++ Sbjct: 74 RFFGAPLPQQVTVKQPDGTSVVVSVSDYESLPYVAGVLDRYGELLFYAGLLFFAGAAALL 133 Query: 128 FVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD 171 + + + RQG+Q+ E++ G+ + ++ K + + Sbjct: 134 ALATILFIRQGQQKLEDKELRGQTIASVASLRQQIQKFNADEIR 177 >UniRef50_C9NPT6 Type IV secretory pathway VirD4 component n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT6_9VIBR Length = 604 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 180/572 (31%), Positives = 291/572 (50%), Gaps = 18/572 (3%) Query: 15 ASMRIRMF---SQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRD 71 +R Q+ + L + ++V +S + YW L + Sbjct: 7 LFYALRTVQFNGQLGATLTIALGVEMMMVVAFHALTSVSGDLWRLEGWYWRVHALYWL-- 64 Query: 72 LIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVS 131 +Q + + + ++ ++ + W FV A +A+ + L+T Sbjct: 65 GASTQQIVAVSDASQAHTWTLGTLMRSPFIELGHARFWRQFVPALELAVGVGLLTMMSFV 124 Query: 132 WILGRQGKQQSENEVTGGRQLTDNPKDVARMLKK--DGKDSDIRIGDLP-IIRDSEIQNF 188 I+ R G S + + G + + M + + + +G + E Q+ Sbjct: 125 IIMIRLGVTASRDRLIRGGKQVPPAQLEREMHRGTSSPSRAPLCLGGFDVLHPHFERQHV 184 Query: 189 CLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAW 248 + GT G+GKS +IR + R RGD V+YD+ FV ++Y P D +LNP DAR W Sbjct: 185 RIEGTTGSGKSVLIREFLAWIRARGDRAVVYDKGCSFVGTFYRPETDVLLNPYDARSVNW 244 Query: 249 DLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR-SYSKLVDT 307 DLW + DF++ A+ LIP + DPFW S R++FA A +RN+ + +L+ Sbjct: 245 DLWADATDAADFEHQASALIPASPQGDPFWNESARSVFASVARQLRNESRPPTTERLLAL 304 Query: 308 LLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP---- 363 L + + L +L N+ AA V + I+KTA+SI+ VLT Y +++R LQG++ P Sbjct: 305 LTTSDLTTLSNFLANTEAATYVSKDIKKTALSIQTVLTTYARSLRCLQGLDRQDRPAHLR 364 Query: 364 --FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVW 421 F+I DW+R +D G++F++S+A H +L+P+IS+WL+IA +L + E+ RR+W Sbjct: 365 QRFSITDWVR---DDSATGFMFLTSHARHHVALRPLISLWLAIASNAILGLSESHERRLW 421 Query: 422 FFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 DELP+L +LP+L L E RKFGGC+V +QS+AQL YG A ++ D++N+R F Sbjct: 422 VILDELPSLQQLPELASTLAEVRKFGGCFVISLQSHAQLIKNYGAHDAQAICDLLNSRFF 481 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 FRSPSH +A+ A+ E+GE++ + RD S + +++ + IQ+LP Sbjct: 482 FRSPSHAMAKVASQELGEQDIDVVRHGQTLTPRARRDARSRNLQRLTRPIITPTQIQALP 541 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 DL C+V PG KL L Y T K P+F+ Sbjct: 542 DLHCFVRSPGTDWVAKLVLPYVTVEKAEPDFV 573 >UniRef50_C9CRW4 TraG n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRW4_9RHOB Length = 758 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 170/704 (24%), Positives = 301/704 (42%), Gaps = 23/704 (3%) Query: 21 MFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYE 80 M +Q+ + F + ++ Y W + + + + + Sbjct: 1 MATQVLKYSISMAAAAFSVTYIYLVAQNYEIDKVRLTGTY-WLSKFNVEQRGTEERLLSY 59 Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQ 140 I G+ +A Q+ D+ + ++ +L + + + F VV I G+ Sbjct: 60 IDDDGRRVERSAGQIYADREIAEIYDEYADNALLFMYYSFIPAALAFAVVFGIFAMVGRN 119 Query: 141 QSENEVTGGRQLT-----------DNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFC 189 E E G +L + R K K + + +S Sbjct: 120 LQEEEYIRGARLVTAKELKAWSKRKWREYEKRFGKGSKKGPRYTLAGIEFPPNSVEAQIG 179 Query: 190 LHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWD 249 + GTVG GK+ + L N R+ G +IYDR G ++ +YDP D ILNP D R W Sbjct: 180 ITGTVGVGKTNAMHELLNTIREAGGRAIIYDRMGGLLRDHYDPEKDIILNPFDERSVGWS 239 Query: 250 LWKECLTQPDFDNTANTLIPMGTKE-DPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTL 308 + E ++ F A +IP D FW + R +F A + ++S L + Sbjct: 240 PFNEVVSPEGFAQIAEVMIPDHPGSLDSFWTQAARLVFQYTARELAKKGHKSNDALRKAI 299 Query: 309 LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD 368 ++I E+L + +P A+ E + KT+ SIRA N + +R+L+ + + EPF+IRD Sbjct: 300 MNIPSEELAEIVAPTPGAHFFGEHVAKTSGSIRA---NMITELRFLEYLRDDAEPFSIRD 356 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELP 428 W+ + + G++F++ NA+ A+++ ++S +A L+ E+R+ ++WFF DE+P Sbjct: 357 WV----VNDRPGFVFLTGNAEQSAAVRNIVSTVFEVAANALMTTEESRDPKIWFFLDEVP 412 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 TL+KLP L + L E R+FGG +V G Q ++QLEDIYG+KAA ++ V+N R F +P + Sbjct: 413 TLNKLPFLPKSLAEIRQFGGAFVVGYQVFSQLEDIYGDKAAETISGVLNNRVVFNTPDYN 472 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVT 548 A+ ++ +GE++ ++ E + GA RDGV ++ +V+ ++IQSLP Y Sbjct: 473 TAQRSSRSLGEEDVIEQQENITLGAHDTRDGVGIVGRRTQRAIVTPAEIQSLPQFVAYFR 532 Query: 549 LPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLS-AVLAAREAEGRQMASLFEPDV 607 P K+ + A +FIP + N E + + L EG + F Sbjct: 533 PAYDAPTAKVIFEPVPTTATAAKFIPYNGNGFDEGGMRVSALNVEIREGTALVEGFASLD 592 Query: 608 PEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVN--VPAGGIEQELKMKPEEEMEQQLPPG 665 + E ++ + S I +++ S + + + +E G Sbjct: 593 ADEQKTEFFRWLDRVRPDGSAGIEAERNQSERDWYWQHFATARVRGLFAKEIAPPDPYAG 652 Query: 666 ISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGE 709 + +G P E ++ E + Sbjct: 653 FAGNGTNQQRETAFVPYPGTLPASPPHAPVEEPETLDASDEADQ 696 >UniRef50_B5YII5 Putative conjugative transfer protein TraD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YII5_THEYD Length = 570 Score = 371 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 127/560 (22%), Positives = 235/560 (41%), Gaps = 21/560 (3%) Query: 51 WQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWS 110 W + T + + P + + QV Y+ + L Sbjct: 17 WFHELQMSFKMHVYTFMIVLLIHLLIPAVYMILFQPKLLGTVIQVFTGFYVQLWPKALEV 76 Query: 111 AFVLAAVVALVIC--LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK 168 F + L+ + + ++ + K ++E G+++ + + ++ + + + Sbjct: 77 LFKKGFWIFLLATPVWLLYPILLTKFKLKAKAIVKDEHMRGQRIVEPSELISLIRRDHPQ 136 Query: 169 DSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS 228 IG +PI + E +F + G G+GK+ ++ ++ RQ+ VIYD G+++ Sbjct: 137 IGIFHIGRIPIPKQYETTHFFVVGKSGSGKTTMLNQVIEKIRQKKHKAVIYDTKGDYIAK 196 Query: 229 YYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM--GTKEDPFWQGSGRTIF 286 +Y+P D I NPLD+R W+++ E D ++ A +LIP ED ++ R +F Sbjct: 197 FYNPEKDLIFNPLDSRTLHWNIFDELYLVSDIESFAYSLIPPVPSGHEDEYFITGAREVF 256 Query: 287 AEAAYLMRNDPNRSYSKLVDTLLSIK---IEKLRTYLRNSPAANLVE-----EKIEKTAI 338 Y + R+ S L T+ + IE L+T + + + E EK Sbjct: 257 YSILYYLYATNQRTMSALWQTVSQGEAGVIETLKTAVNHYKLDDCKRGLGLLEGYEKGVK 316 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 S +++ K + +EH+ F I+DW+ Q +G+LF+ + LKP+ Sbjct: 317 SASDIISTMKKYSNCFKYVEHHQSSFKIQDWLT----KQDSGFLFLVNYDKIKNVLKPLA 372 Query: 399 SMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 S+ L L + ++R RR++F DE +L ++P V+ L R G Q Sbjct: 373 SVLLEQLGNAALTLPDDRERRLFFVLDEFASLQRMPKFVDFLERGRSKGISLWIATQDIN 432 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRD 518 Q+E YG + ++ + T F +E+ + +G++E L+ E S G +RD Sbjct: 433 QIEKEYGNRTMNTIINNCTTTVAFAVQDVNTSEYLSKFLGDREILETDESLSMGPADLRD 492 Query: 519 GVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 G+S + + L+ S+ LP Y+ + G YP K + + P P +IP Sbjct: 493 GLSLTRRRKTDRLILPSEFALLPVFHFYIKI-GEYPISKSRIDLKIYPDTQPSYIP---- 547 Query: 579 PEMENRLSAVLAAREAEGRQ 598 E R++ V E Q Sbjct: 548 DENRFRIATVSEQSEQAQEQ 567 >UniRef50_A5CC23 Conjugative transfer protein n=48 Tax=cellular organisms RepID=A5CC23_ORITB Length = 585 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 172/586 (29%), Positives = 285/586 (48%), Gaps = 50/586 (8%) Query: 1 MSF-NAKDMTQGGQIASMRIRMFSQ-IANIMLYCL-FIFFWILVGLVLWIKISWQTFVNG 57 M+F N + T+G Q+ + ++RMF Q AN+ L FWI+ L Q Sbjct: 2 MNFQNQGNFTRGSQLFAHKLRMFGQGSANVFTIGLGLSIFWIICRLY-------QKVFLS 54 Query: 58 CIYWWCTTLEGMRDLIKSQPVYEIQYYGKTF---------RMNAAQVLHDKYMIWCS--- 105 +Y++ L + Y+I G F +NA LH+ Y Sbjct: 55 SLYYFAIERYVQLKLTIGEHFYDIDQIGIVFYSLRFKKWIHLNAQDFLHEFYTGQHGFKI 114 Query: 106 EQLWSAFVLAAVV-ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLK 164 +QLW + +A++ L++ I + QGK+ G +++A+MLK Sbjct: 115 QQLWEFLINSALLEGLIVFAIGVIISIVFFTAQGKKTIIKAKIRGADFV-RSRNLAKMLK 173 Query: 165 KDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS--------EVIRRLANYARQRGDMV 216 K S I G LP++++SE + + ++ L R + D Sbjct: 174 SAKKASKICFGGLPLVKNSERLHILIT--------GTTGTGKTNMLNELLPQIRSQQDRA 225 Query: 217 VIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP 276 +I D +G F ++D DK+LNPL+ W W +C DF + A++ + D Sbjct: 226 IIIDLTGAFTDRFFDSKCDKLLNPLEKNSEQWLPWNDCFEAADFHDIASSFSNYTHRIDD 285 Query: 277 FWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKT 336 F+ + + +EA L ++D + KL+ T++ + RN+ + ++ E +T Sbjct: 286 FFAKNAELVLSEALKLYQDD--KDIIKLIHTIIYSDNRQFVKAFRNTAVSGIISESAPET 343 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 + I++ L + +++YL+ G F+I++W E GWLFI++ A+L+P Sbjct: 344 SAGIQSTLGKNITSLQYLKP----GGNFSIKEWFSNSAE---TGWLFITATPSQRATLQP 396 Query: 397 VISMWLSIAIRGLLAMGENRNRR-VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 +IS W+SIAI+ L+ N + + +WF DELP L K+ L L E+RK+GGC+V G+Q Sbjct: 397 LISAWISIAIKALMCRNPNHDNKNIWFILDELPALQKVSSLPVALAESRKYGGCFVAGLQ 456 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 + QLE IYG AS+ D+ N++ FR A +A +GE+E ++ E SYG++ Sbjct: 457 NIHQLEAIYGSAECASMLDLFNSKFIFRVSDQVTAYKSALTLGEEEIIETQENLSYGSNT 516 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 +RDGV+ ++ LV S+I +LPDLTCYV L G +P KL++K Sbjct: 517 MRDGVNMNNVERKKLLVMPSEIMNLPDLTCYVKLVGNFPITKLTMK 562 >UniRef50_A5G187 Type IV secretory pathway VirD4 components-like protein n=3 Tax=Alphaproteobacteria RepID=A5G187_ACICJ Length = 616 Score = 360 bits (924), Expect = 9e-98, Method: Composition-based stats. Identities = 136/563 (24%), Positives = 243/563 (43%), Gaps = 10/563 (1%) Query: 46 WIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCS 105 ++ S V Y + + P I++ G+++R + + + Sbjct: 45 YLMTSPTQAVQVVDYMAADVAANLMKFVPINPEMTIEWRGRSYRTGVKEWAAFPPLRDQT 104 Query: 106 EQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKK 165 + L + ++ + RQ + + V G +L ++AR+ Sbjct: 105 FDALENLAAGGAIGLAAGWVGLWLSAGRRRRQMEAILADRVVRGTKLV-TEAELARLNAN 163 Query: 166 DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF 225 ++ G + + E ++ + GT G GK+ V+R+ + RG+ ++YD SGEF Sbjct: 164 HATKPLLKFGSVTLPSQLENRHIAIIGTTGVGKTTVLRQQLDVIEARGEAALVYDTSGEF 223 Query: 226 VKSYYDPSI-DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED-PFWQGSGR 283 + +YY+P+ D ILNP D R W + E + D D + LI ED W + R Sbjct: 224 LANYYNPARGDIILNPFDQRGVFWSPFAEIIHPADCDRISRYLITETGDEDKDIWLETSR 283 Query: 284 TIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAV 343 + A + + + L++ L ++ ++L +L N+ +A E+ E+ S+ + Sbjct: 284 NLVANMIRNLWREGRGTLEALLNALQAMPRQELERWLANTSSARTFEKDAERATASVLFM 343 Query: 344 LTNYVKAIRYLQGIEHNGE-PFTIRDWMRGVREDQ-KNGWLFISSNADTHASLKPVISMW 401 L V + +L+ +GE F+I + + + +++ + W+F+ D S+KP++++W Sbjct: 344 LVKAVNMLMFLRKAPRDGELAFSISSFFKHIGQNKGRKPWIFVPRKEDYFESMKPLMALW 403 Query: 402 LSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE 461 L A +L + + +RVWF DEL L ++ +L +LP+ RKFG C V QS Q+ Sbjct: 404 LECAASAMLGLSTSPTQRVWFLLDELADLPRVQNLERLLPQGRKFGACAVLSFQSIGQMR 463 Query: 462 DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVS 521 YG A +L NT+ F + H E+AA IG+ E + + + S Sbjct: 464 ARYGHDGAEALLGCCNTKLFLQMSDHASREWAAANIGKVEVEIPLMTETVDPETGKLQQS 523 Query: 522 TGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR----PKVAPEFIPRDI 577 E + V SD+ LP T Y+ LP P ++ L P +FIP DI Sbjct: 524 FTTARETRPAVIESDL-RLPKHTGYLMLPDGLPVARIKLTNDHIVARGPARQLDFIPADI 582 Query: 578 NPEMENRLSAVLAAREAEGRQMA 600 L A+ AE + Sbjct: 583 AEAFWGVLQEAQKAKTAERLEAP 605 >UniRef50_B8GZQ6 Bacterial conjugation protein, ATP binding domain trwB n=1 Tax=Caulobacter crescentus NA1000 RepID=B8GZQ6_CAUCN Length = 605 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 124/608 (20%), Positives = 256/608 (42%), Gaps = 11/608 (1%) Query: 1 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY 60 MS + +++++G + + + S ++ Y L G + Sbjct: 1 MSSHHQNLSRGQALFAGALG--SIVSRWRAYILTCLATATCGAYAGFSQLPLSTQRAAQD 58 Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + L + S E ++A ++ + +E+ A +V + Sbjct: 59 YAHAKLMLELLVSVSDTTVERYTPTGPEPVSAQGLVSHAFYQAAAERGLDALQWGGLVGV 118 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII 180 + + + ++++ R G+ +E+ G + + +AR+ +K IR+ +P+ Sbjct: 119 LFGVTLCAIWAYLVIRWGETAAEDNARRGASVV-TERTLARLTRKRAGPDAIRLASIPLP 177 Query: 181 RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI-DKILN 239 E ++ L GT G+GK+ +R++ + +RGD ++YD SGEF+ YY P D ILN Sbjct: 178 TTLETRHIALIGTTGSGKTTTLRQMLDAIDKRGDTAIVYDTSGEFISHYYRPERGDIILN 237 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED-PFWQGSGRTIFAEAAYLMRNDPN 298 DAR A W + E D D+ A L+ + W + R + A+ + + Sbjct: 238 AFDARGAFWSPFDEIHHPADADHIARQLVASTGAAEQDIWLDAARILVADVLRKLHAEGR 297 Query: 299 RSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 S L++TL + ++L+ +L ++ +A + E+ E+ + S+ +L V+ ++YL+ Sbjct: 298 TDLSTLIETLGRLSRDQLKDWLADTSSARMFEQGAERASGSVLFMLARCVQLLQYLRASP 357 Query: 359 HNGEPFTIRD-WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 + F+ R + + + W+F+ A+++P+++ +L A +L + + + Sbjct: 358 EDATVFSFRAHFEALDQRTGERPWIFVPRQEQYFAAMRPLLACFLECAATAILGLSPHPS 417 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RR+W DEL L K+ +L +LP RKFG V Q+ Q+ + YG+ A +L N Sbjct: 418 RRIWLMLDELADLPKVDNLARLLPLGRKFGASVVVTFQALGQMRERYGKDGAEALLANTN 477 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 T+ F + ++A+ +G E + + S G + L+ S Sbjct: 478 TKLFLQLADPDTRQWASQAVGTVETEIRGASENLDHQVGKGRTSIGSSRQILPLLLESQF 537 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLK----YQTRPKVAPEFIPRDINPEMENRLSAVLAARE 593 LP Y+ LP +P +++++ F+ D++ + + Sbjct: 538 -RLPPFHGYLQLPDAFPVARVTIRNDHIIARGRAKQQAFVAIDLDKTLWGAARSPAVEPA 596 Query: 594 AEGRQMAS 601 + Sbjct: 597 SNLSDGGP 604 >UniRef50_C6DZ92 Sigma 54 interacting domain protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ92_GEOSM Length = 672 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 117/616 (18%), Positives = 234/616 (37%), Gaps = 40/616 (6%) Query: 60 YWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVA 119 + W L + + P + I + Y+ + L + V+ Sbjct: 76 FLWKYPLAHLARSFRLDPTFHIYAPRRLAGWPHD---AQGYVAMRAHDLVQNVLYGEVLK 132 Query: 120 LVICLITFFVVSW---------ILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS 170 + F +SW + R + + E G +L + + + + Sbjct: 133 AYRFPLAFSFLSWVCVWPMAIRYVRRVTARIKDQEHIRGARLITE-----KEIHSESDGT 187 Query: 171 DIR-IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY 229 I + + I D ++ + G G+GKS V+ + + + D GE V+ + Sbjct: 188 GILPVASIRIPEDLSRRHILIAGQTGSGKSTVLIQHLAAIQNATRRAIANDFKGELVERF 247 Query: 230 YDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEA 289 Y P D ILNP+DAR W L+ E ++PD +LIP ED FW + + + Sbjct: 248 YRPEKDLILNPIDARGVGWTLFNELKSKPDLTAVTGSLIPPAKGEDRFWSAAAQDVLRGV 307 Query: 290 AYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN----LVEEKIEKTAISIRAVLT 345 R+ ++L L S K+ ++ + + + + +++ K A + AVL Sbjct: 308 MAYCYETNKRTNAELWKALTS-KLHEITEMCQATESGHAGYTYIQDASSKQAAGVIAVLM 366 Query: 346 NYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 +YV + + PF++R W + +FI++ + ++P +S++ +A Sbjct: 367 SYVSWLEF-----AFDGPFSLRRWAEEAGDK----MVFITNTDEVANIMRPYLSLFADLA 417 Query: 406 IRGLLAMGE--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 + L + E + ++ DEL + +LP + +L R G GI + +E + Sbjct: 418 GKRFLTLPESTEPEKNIYLILDELGNMQRLPSVKRLLTAGRSKGIVVEVGIPDFTSIESV 477 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 YG + A ++ + ++ + A F + E+E ++S YS R G + Sbjct: 478 YGREDAHTIINSCGSKLILNLGDPEAARFFSDLASEEECWESSTYYSISEHDHRGGENHN 537 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ---TRPKVAPEFIPRDINPE 580 + + + ++ ++I L + Y LPG P ++ + + P V FI R Sbjct: 538 RQVRTRKVIMPAEIMRLAVGSGYFMLPGGNP-AQVEIPWSEANKLPVVHKPFILRPG--L 594 Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVN 640 + L A +++ + P+ +V + +P V +D++ S Sbjct: 595 SLDELEAKDQEVSIMAQKVLNGPAPEELKVQVAHNAASGVRPPLNVEETSSDREQISVRP 654 Query: 641 VPAGGIEQELKMKPEE 656 EE Sbjct: 655 ENVLNTATVEADLSEE 670 >UniRef50_Q2QCR0 TraJ n=1 Tax=Pseudomonas sp. CT14 RepID=Q2QCR0_9PSED Length = 512 Score = 339 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 141/513 (27%), Positives = 230/513 (44%), Gaps = 22/513 (4%) Query: 70 RDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFV 129 ++ P++ + K Q D+ + A+V +I I V Sbjct: 11 LAVMVLVPLFAWFFTAKLMYGIEKQGARDRVFYLAKNTFTLWPLAVALVGGLILAIALCV 70 Query: 130 VSWILGRQ-GKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNF 188 + L + ++ G QL +++ R+ K+ + I I +P+ +E +F Sbjct: 71 LIVKLSKTTFAGAHFDKYFRGSQLVSQ-RELKRLTKEKEEQ--ITIAGVPVPIAAEATHF 127 Query: 189 CLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAW 248 + G G GKS + R + QR D +VI D GEF+ ++Y DKILNP DAR W Sbjct: 128 SVGGATGTGKSTIFREMMYGCMQRKDRMVILDPDGEFLSTFYRKG-DKILNPYDARTEGW 186 Query: 249 DLWKECLTQPDFDNTANTLIPMGTKED-PFWQGSGRTIFAEAAYLMRND-PNRSYSKLVD 306 + + E + DF+ A ++I + D W GR +FAE A + N N ++ Sbjct: 187 NFYNEIRSHYDFERYAKSIIQVSDSNDSEEWNQYGRLLFAEVAKKLYNTTRNPGMREVFR 246 Query: 307 TLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI 366 E L+ +++ + A +L E E+ S+R VL+N + + F++ Sbjct: 247 WTNECDSETLQAFVKGTRAVSLFTE-NERATGSVRFVLSNKL-----PAHFDMPPGNFSL 300 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDE 426 R W ED G LFI+ + + +L+P+IS W+ +L M N RR+W F DE Sbjct: 301 RQW----CEDPNGGNLFITWDENMREALRPLISCWVDTIFTSILGMKSNPKRRIWTFLDE 356 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP- 485 L +L +LP L ++L RK GGC V G QSY QLE +YGEK A ++ T Sbjct: 357 LESLQRLPTLGDMLTRGRKKGGCVVSGYQSYTQLESVYGEKLAETMLANHRTMVALAVGR 416 Query: 486 -SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 AE + + E E L+ E S S +D++ + +V S+I +L +L Sbjct: 417 MGTATAERMSKALSEHEVLRTKEGRS-SRWGDWGTRSENEDVKPERIVMSSEIMALNNLE 475 Query: 545 CYVTLPGPYPAVKLSLKY--QTRPKVAPEFIPR 575 +++ PG P ++++ TR P +P Sbjct: 476 GFLSFPGSIPIARVTIDPINFTRTNPVPGIVPN 508 >UniRef50_B9MIL1 Putative type IV secretory pathway VirD4 component n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MIL1_DIAST Length = 571 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 129/576 (22%), Positives = 236/576 (40%), Gaps = 22/576 (3%) Query: 54 FVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFV 113 N +Y L + + Y + F A + Sbjct: 1 MTNILLYSITAILAAAAFWVLRGRENRVLMYLRHFAAALAVASVVIAFEGKEAYSIGKLL 60 Query: 114 LAAVVALVICLITFFVVS-WILGRQGK---------QQSENEVTGGRQLTDNPKDVARML 163 LAA V L + + G GK + E G +L N + + ++L Sbjct: 61 LAAAVGLGLFFYAPINIFNKFRGGLGKIGISFGETSGSAGGEYIRGAKLV-NGQQLQKIL 119 Query: 164 KKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 KK+ + +G I E ++F L G+ G GKS I + + RGD V I D G Sbjct: 120 KKES--GSLTVGGQKIPERLEARHFMLAGSTGVGKSVAISEMLDGIAARGDRVFIADAGG 177 Query: 224 EFVKSYYDPSI-DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSG 282 F+K+YYD D ILNPLD+R +W E D D A +++P G W Sbjct: 178 NFLKNYYDEERGDIILNPLDSRAVSWSPLAEMEGPWDADLIAKSIVPDGDGGSKEWNQYA 237 Query: 283 RTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRA 342 + I + + + + + IE+LR +PA LV E EK SIR Sbjct: 238 QVITSAVLKHCW-QNDLTNFDIFRLAIIANIEELRMVFEGTPAQPLVAEGNEKMFGSIRG 296 Query: 343 VLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 ++ Y+ +YL F+++ + ++ WLF + +++ P+I+ Sbjct: 297 IVGTYISPFQYLDPAAGANNGFSLKSIVE---DNGAKNWLFFNYPDKQISTVAPIIAAMT 353 Query: 403 SIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 I + +L++ + NR+ W DE ++ ++ +++ L +ARK GG + G+Q+ +QL+ Sbjct: 354 DIVSKSILSLEADNNRKFWLIIDEFASVGRISSILDFLTKARKNGGRAIIGVQTISQLKS 413 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 YG A++L ++++ FR P A+ + +G+++ + + + ++ G S Sbjct: 414 AYGVNDASTLMSCLSSQIVFRVPDPDTADIMSRLLGDQQISRVIQSGGESSQSMQIGGSK 473 Query: 523 GK----DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 + + +V +I + PDL + G PA + +++ R KVA F Sbjct: 474 SENWSQQITTDRIVMTGEIMNFPDLYGILNFAGDIPAAPIEVEWMERHKVAEHFQATTRK 533 Query: 579 PEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGE 614 + ++ + ++ + D+P V S + Sbjct: 534 EIKIAAPAKPAEIQKPTETENTAVSDSDLPGVESDD 569 >UniRef50_Q8R8F9 ATPase involved in conjugal plasmid transfer n=3 Tax=Clostridia RepID=Q8R8F9_THETN Length = 667 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 101/695 (14%), Positives = 218/695 (31%), Gaps = 63/695 (9%) Query: 36 FFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQV 95 F + L W+ + T + + + + Sbjct: 1 MFLLYAFLTAWLFVPLIKTFQLLSQLNPQTSS----------KIDFTPIKQMYTNPLLSL 50 Query: 96 --LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLT 153 L + L + + + I ++ + QG + ++ T G Sbjct: 51 KELTNP------ATLKAYLIFLLISIPAIAVLVILARATDYRTQGVKYLRDDGTHGTANW 104 Query: 154 DNPKDVARMLKKDGKDSDIRIGD-----LPIIRDS-EIQNFCLHGTVGAGKSEV-IRRLA 206 ++ ++L G + + +G + + DS +N + G+ G+ KS IR Sbjct: 105 MTVQEAKKILGI-GTNKGLILGRIGSKVVTLPPDSFLNRNVAIFGSPGSMKSRAYIRTNI 163 Query: 207 NYARQRGDMVVIYDRSGEFVKSYY-----DPSIDKILNPLDAR-CAAWDLWKECLTQPDF 260 + G +VI D GE + K+ N ++ + W+ + D Sbjct: 164 LQLAKEGQSMVITDPKGEIFRDMAEFLKNRGYTIKVFNLVNMKHSDRWNPIETIQDDIDA 223 Query: 261 DNTANTLIPMGT-----KEDPFWQGSGRTIFAEAAYLM---RNDPNRSYSKLVDTLLSIK 312 +I DPFW + + + A + + R+ + + L S + Sbjct: 224 QLFVEVIISNTKVATTKSGDPFWDRAEQNLLKALALYVAMEYPEHERNLASVYSLLASAE 283 Query: 313 IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI---RDW 369 + + + P ++ + A + V T + + + N I D Sbjct: 284 PRAVDSVFKTLPNSHPAKMPYNIYAQANETVRTGIIIGLGTRLQVFQNKMVQKITETSDI 343 Query: 370 MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR----NRRVWFFCD 425 + +K + ISS+ D ++ + ++ S L + N V+F D Sbjct: 344 DLELPGREKCAYFCISSDTD--STFDFLAGLFFSFLFIKLTRYADMNGGTLNPNVYFLLD 401 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E P + +PD + + R G Q+ +QL++ Y A + +TR F Sbjct: 402 EFPNIGAVPDFTKKISTMRSRGIHSSVVFQNISQLKNRYPNDAWQEIIGNCDTRLFLGCT 461 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 A+F + +G+ + + G + + D + +++ L++ +I L Sbjct: 462 DVATAQFVSDLLGQATVEARTFRKHAGLEGLFDFGDISLNTQKRPLLTPDEILRLDHRNA 521 Query: 546 YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP 605 V L G P + + Y P + + V EP Sbjct: 522 IVILRGQKPLMVEKMDYIKHP--------------LSKEIRPVPITEYIPEWAKEETREP 567 Query: 606 DVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPG 665 + V ++ + E + S I++ N G ++ + E +++ Sbjct: 568 EPKPVDELKNELKKEHKNESASKPISEPAETVENNRKPAGSIKDREEPSENIAAEEVFFI 627 Query: 666 ISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVN 700 S + ++ + + E N Sbjct: 628 SSTFSTSENGQLKINETDNIKEPSAEKEKTKGEKN 662 >UniRef50_Q32X91 Probable TrwB n=1 Tax=Xanthomonas axonopodis pv. glycines RepID=Q32X91_9XANT Length = 510 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 121/462 (26%), Positives = 203/462 (43%), Gaps = 16/462 (3%) Query: 112 FVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD 171 V + + + F+ + V G ++ K + G+ Sbjct: 57 LVFSGLGISYGTALLVFLYLKAQSDPAAAAAAGNVLRGSRVEAGGK------GRKGQAGA 110 Query: 172 IRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD 231 I I + I R E Q+F GT G GK++ I + R RG VI D G F + Sbjct: 111 IEIAGVEIPRQLEAQHFLFTGTTGTGKTQAINSMLRTIRSRGQRAVIADPGGGFYSRFGR 170 Query: 232 PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAY 291 D + NP D R W + + D + A ++P G + W ++ A Sbjct: 171 TG-DVLFNPFDGRTVDWSPFADIENDYDCERIAKAIVPDGVGDGMQWHHYSQSFVAAVLR 229 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 M RS +L+ L + + ++L L +PAA L + E+ S RA+L++YV Sbjct: 230 SMHAKGERSIKRLLYWLTTAEPKELADMLAGTPAAALCAKGNERMLASTRAILSSYVGVF 289 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 YL + F++R+W R + GWLF++ D L+ +++ L +AI L+ Sbjct: 290 PYLA----DEGTFSVREWTRNAMGE---GWLFVTYRDDQMGMLRGLVATMLELAIVEGLS 342 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 + E+++R +WF DE+ +L K+ L L + RK+GG + G+Q+ AQL YG A + Sbjct: 343 LSEDQDRGLWFVMDEVDSLGKVTSLRAGLTKLRKYGGRCILGLQTVAQLRTTYGRDEAQT 402 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP-VRDGVSTGKDMERQT 530 L +T+ R+ + A E+G++E + + S + S + RQ+ Sbjct: 403 LLANCSTKLVLRAGDAETARTMEDELGQQEIERTTLSDSTSKGEFFKGSTSASQQYTRQS 462 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 V S+I L DL Y+ +PG +++L Y P+V P F Sbjct: 463 AVMASEIMGLLDLHGYLKMPGET-IHRVALDYVGMPEVQPTF 503 >UniRef50_B4S9K8 TRAG family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9K8_PROA2 Length = 723 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 110/696 (15%), Positives = 222/696 (31%), Gaps = 59/696 (8%) Query: 39 ILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLI-KSQPVYEIQYYGKTFRMNAAQVLH 97 + GL+ + +W G +I PVYE + F + Sbjct: 14 VATGLLFMLLGTWAATQYVAFLLGYQPQLGEPLMIIGGYPVYE--PWAWMFWSYHFEPYA 71 Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLI---------TFFVVSWILGRQ----GKQQSEN 144 + S +++F A V +V+ ++ T+ W ++ G E Sbjct: 72 PHVFEYASRITYASFFAMAGVMVVLSILRAKRQRQAGTYGTARWATEKELDEAGILAEEG 131 Query: 145 EVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRR 204 V + V+R + ++ I+R + ++ +GK + Sbjct: 132 IVLAQTRDARYASAVSRHNGEAEVKWVMKKPGAAILRHNGPEHVFCFAPTRSGKGVGL-- 189 Query: 205 LANYARQRGDMVVIYDRSGEFVKS----YYDPSIDKILNPLDARCAAWDLWKECL----T 256 + V+YD E + S P ++ E Sbjct: 190 VIPTLLAWKGSCVVYDIKKENWAATAGWRRQFSHCWCFEPTSPHSVRFNPLMEIRQGDNE 249 Query: 257 QPDFDNTANTLIPMGTKED--PFWQGSGRTIFAEAAYL-MRNDPNRSYSKLVDTLLSIKI 313 D N A+ L+ +D W+ +G + A + + +++ S + L + Sbjct: 250 VRDVQNVADILVDPEGVKDRLDHWEKTGHALLVGAILHVLYAEEDKTLSGVAGFLANPGR 309 Query: 314 ---EKLRTYLRNSPA-----------ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 E L L + A + K E + + +++ R Sbjct: 310 SIEETLGMMLSHHHLEGHPHPVVASCAREMLNKSENELSGVLSTAMSFLGLYRDPVIARS 369 Query: 360 NG-EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM----GE 414 F I D M+ + L++ KP+I + L+ R L + Sbjct: 370 TAVSDFRISDLMQ----GDRPVSLYLVVPPSDIDRTKPLIRLMLNQMGRRLTEKIGFGKK 425 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + R+ DE P+L +L L +G + QS Q+E +YG+ A + D Sbjct: 426 HYRHRLLMMLDEFPSLGRLGFYETELAYMAGYGIKCIMIAQSLNQIEKVYGQNNA--ILD 483 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA-DPVRDGVSTGKDMERQTLVS 533 + R + + + A+ + +G+ + Y+ P V + + L++ Sbjct: 484 NSHVRITYGALDERTAKRISDLLGQATEKRQQLNYAGNRLAPWLGHVMQSEQESPRPLLT 543 Query: 534 YSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP-EFIPRDINPEMENRLSAVLAAR 592 +I LP V + G P L Y + + P PE + + A Sbjct: 544 PGEILQLPGDDALVMIGGLPPYRAKKLMYYQDRRFEGMAWRPAPDTPEEQQKELPEHVAP 603 Query: 593 EAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL-- 650 A + E + P A +D +S+ ++ ++ + Sbjct: 604 PAWMDYASERNETRYDTSYIDASGCSCGEGSGPGMSAHDDDESEEHQDLQHDHEQEHVLE 663 Query: 651 KMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENH 686 +M PE+E+ + + P +E E + ++ E+ Sbjct: 664 RMHPEDELYEGIIPEHAEDDE-ASVPGHQQPADESE 698 >UniRef50_C7HYW0 Putative type IV secretory pathway VirD4 component n=1 Tax=Thiomonas intermedia K12 RepID=C7HYW0_THIIN Length = 535 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 121/520 (23%), Positives = 208/520 (40%), Gaps = 13/520 (2%) Query: 95 VLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTD 154 +L M + +L+A V + + +S G G + Sbjct: 23 ILVAGLMAVGVSGFFLKPILSAAVFVPFAYFAYKYLSKNFGAGTGSGKNINHLRGAAMVG 82 Query: 155 NPKDVARMLKKDGKD--SDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 + ++ + GK D+ I + I R+ E + F G G GKS I + + QR Sbjct: 83 GAELDNLVIARYGKRQTGDLHIAGIRIPREFETRGFMFAGAPGTGKSVAITSMLDIIYQR 142 Query: 213 GDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGT 272 GD I DRSG + YY+P D ILNP+DAR W E ++ D + A ++IP Sbjct: 143 GDAAFIADRSGIYAARYYNPQRDIILNPIDARAHEWSPLAEMRSEYDSETIAKSIIPDAP 202 Query: 273 KEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK 332 + W +TI A + S + + +L+ L + L++ Sbjct: 203 GDAAEWNHYAQTILAGILLHAWRAGL-NNSAITRLAQRADMAELKEILADHAGIGLLQN- 260 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 EK SIR +L Y + L + + F++ W+ Q + F +D Sbjct: 261 -EKMFGSIRGILATYTIGLARLLP-QAGRDGFSLSAWVHE----QPAAFAFFPYLSDQMK 314 Query: 393 SLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 ++ +I+ + +L + + NRR+W DE +L ++ + L ARK GGC + Sbjct: 315 PMRGIIAALADVYADAVLTLPPDANRRLWLVLDEFASLGRVDSMENFLTNARKHGGCSIL 374 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 G+Q+ +Q+ +YG A S+ ++TR R+P + AE+ + +G+K+ ++ S Sbjct: 375 GMQALSQVHSLYGRDNATSMLSSISTRLTLRAPDAETAEYLSRGLGDKQVVRTMRSGSRS 434 Query: 513 ADPVRDG--VSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK-YQTRPKVA 569 + S + + + LV ++I PDL Y+ + G P + L RP A Sbjct: 435 SSKQGGSNTESWNQQIATERLVLPAEIMRTPDLVGYLQIAGDLPVGHIRLSLPPQRPDAA 494 Query: 570 PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPE 609 F PR P + + D E Sbjct: 495 HAFTPRAAAPTPTPEPAPAPELTPTPDATPENENPLDGLE 534 >UniRef50_A5FU76 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FU76_ACICJ Length = 604 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 133/599 (22%), Positives = 237/599 (39%), Gaps = 43/599 (7%) Query: 16 SMRIRM-FSQIANIMLYCLFIFFWI---LVGLVLWIKISWQTFVNGCIYWWCTTLEGMRD 71 R+ M F+ I +L F F W+ L + + VN + + Sbjct: 12 VYRVAMGFTMIYAALLTFGFWFAWLRAESAYLFILQSSAASIIVNVGLPAIANMARNQVE 71 Query: 72 LIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVS 131 + A KY+ W+A+ +VA ++ L+ F+ Sbjct: 72 RRQIFHRALSLVVVLGIVNFAGLYYGSKYLYETGFPGWAAWFTTILVAGMVTLLATFITL 131 Query: 132 WILGRQGKQQSENEVTG----GRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQN 187 + + G G + K A + + +G +P+ D E+Q+ Sbjct: 132 GAPSIEKQIMEIPPHIGALRPGEKWLRGAKIEAAPQGQIIDRGRLSVGGIPLEWDREVQH 191 Query: 188 FCLHGTVGAGKSEVIRRLANYARQR--------GDMVVIYDRSGEFVKSYYDPSIDKILN 239 L+G G GK++V R+R V+I D G + + D +LN Sbjct: 192 TFLNGAAGTGKTQVAEGFLRAIRERALLPYIKKSPRVIILDPGGAYYSRFGQDG-DVLLN 250 Query: 240 PLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR 299 P DAR AW + E DF+ A +P+ + W GR A+ M + + Sbjct: 251 PFDARSVAWSPFAEIKRPQDFNRVAAAFVPLAEGPNKEWSEFGRKTMADTMRAMVRNDEK 310 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 S +L LL E L YL N+ L E+ K + +A + ++ +YL+ Sbjct: 311 SPQELFR-LLDGSAENLAFYLNNAEIYGLTGEENMKMFSNAKATIAPNIEIFQYLKPD-- 367 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR--- 416 F++RDW+R E +GWLFI+ D L+ ++ +AI L++ N Sbjct: 368 --GNFSVRDWLRKGDEANDSGWLFITYRDDQMKLLRQFVAAMADLAILEGLSLPSNEGLP 425 Query: 417 ---NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 +RR+++F DEL ++ + +L + L + RKFGGC V G+Q+ +QL +YG ++ Sbjct: 426 AEEHRRLFYFMDELDSIGAVSELKDALIKLRKFGGCCVLGLQTISQLRAVYGRDTTRAIL 485 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV------------- 520 + T R + AE +G+++ + + YS A R G+ Sbjct: 486 GNVATNVVLRPQDGETAEEMEKLLGDQDIERETVTYSQSAGNSRSGMFGNGHSNTSTGRT 545 Query: 521 -STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 + + + + V S++Q++ +L + P P +L Y P++ F+ + Sbjct: 546 ANQQRQIVTRKCVLASELQNMENLHGILMRPAS-PHHPFTLDYVEMPRINAPFVEHEYA 603 >UniRef50_D1ATC0 Type IV secretion system protein VirD4 n=53 Tax=cellular organisms RepID=D1ATC0_ANACI Length = 808 Score = 327 bits (838), Expect = 8e-88, Method: Composition-based stats. Identities = 121/719 (16%), Positives = 222/719 (30%), Gaps = 59/719 (8%) Query: 24 QIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQY 83 +N + L FF + L IS FV W L S + ++ Sbjct: 3 SSSNHIRNILVFFFGMFFLLEFCFYISGALFVLSM---WGLEYLDFNALNPSISDFPMRL 59 Query: 84 YGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSE 143 + F D + L AA + +V F + + + + Sbjct: 60 WPTIFNYIHGWW-ADPKLYGVPNSLKLWLSFAAPLCIVGT---VFWNLRHILLEWRPFRK 115 Query: 144 NEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIR 203 E G + +D+ ++ + K + + Q+ L G+GK Sbjct: 116 KEALHGDSRWASERDIRKIGLRSRKGLLLGKDQRGYLVADGYQHALLFAPTGSGKGVGF- 174 Query: 204 RLANYARQRGDMVVIYDRSGE---FVKSYYDP--SIDKILNPL--DARCAAWDLWKECLT 256 + D +V++D E + + NP D ++ Sbjct: 175 -VIPNLLFWEDSLVVHDIKLENYDITSGWRKKIGQEVYVWNPAQPDGISHCYNPLDWISK 233 Query: 257 QP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR--SYSKLVDTLL 309 +P D AN ++P E FW R++F + P + S+ ++V T+ Sbjct: 234 KPGQMVDDVQKIANLIMP----EQDFWYNEARSLFVGVVLYLLAVPEKVKSFGEVVRTMR 289 Query: 310 SIKIEK-----LRTYLRN-SPAANL----VEEKIEKTAISIRAVLTNYVKAI-RYLQGIE 358 S + L T + P A + +K +K + + + + ++ L Sbjct: 290 SDDVVYNLAVVLDTIGKKIHPVAYMNIAAFLQKADKERSGVVSTMNSSLELWANPLIDTA 349 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR 418 F I+++ +K +++ D L+P++ ++ A L + + Sbjct: 350 TASSDFNIQEF------KKKKITVYVGLTPDNLTRLRPLMQVFYQQATEFLCRALPSDDE 403 Query: 419 R--VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 V F DE PTL K+ + R + IQ QL+ IY E S Sbjct: 404 PYGVLFMMDEFPTLGKMEQFQTGIAYFRGYRVRLFLIIQDTEQLKGIYEEAGMNSFLSNS 463 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 R F + + + A + IG K + S D S ++ L+ + Sbjct: 464 TYRITFAANNIETANLISQLIGNKTVSQESLNRPKFLDLNPASRSLHISDTQRALLLPQE 523 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 + LP + + YP +KY + + P E Sbjct: 524 VIMLPKDEQILLIESTYPIKSKKIKYYEDKFFTKKLLKSTFVPTQEPY-------DPDAA 576 Query: 597 RQMASLFEPDVPEVVSGEDVT--QAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKP 654 R DVP GE E+ Q ++G + + Sbjct: 577 RGGVDTVAEDVPTSEEGEQQAAIAHEESAQEAQQPQEQHGDEAGYDEFGDYPQDYDYSSE 636 Query: 655 EEEMEQQLPPGISE----SGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGE 709 ++E + L E +GE +D E E+H + + E + GE Sbjct: 637 DDEYMEGLDDIEGEDVPLNGEGLDDIGDEDGYPEDHVSDEGHPEEDELLAYEEEHTDGE 695 >UniRef50_Q04230 TrwB n=5 Tax=Proteobacteria RepID=Q04230_ECOLX Length = 507 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 122/461 (26%), Positives = 207/461 (44%), Gaps = 21/461 (4%) Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 + ++ ++++ + + G ++ K + RM ++ K + + +P+ R Sbjct: 63 VGVLFVWLLNSVGQGEFGGAPFKRFLRGTRIVSGGK-LKRMTREKAKQ--VTVAGVPMPR 119 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPL 241 D+E ++ ++G G GKS ++R LA RGD +VI D +G+ + + D ILNP Sbjct: 120 DAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGR-DKDIILNPY 178 Query: 242 DARCAAWDLWKECLTQPDFDNTANTLIPMGTKED-PFWQGSGRTIFAEAAYLMRNDPNRS 300 D R W + E D+ A +++P G ++ W GR + E A + S Sbjct: 179 DQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPS 238 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLV--EEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 +L + LR +L + A +L + K S R VL++ + + + Sbjct: 239 MRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKL-----PEHVT 293 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR 418 F+IR W+ ED G LFI+ D +L+P+IS W+ + +L++ E R Sbjct: 294 MPDGDFSIRSWL----EDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKR 349 Query: 419 RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNT 478 R+W F DEL +L KL L + L + RK G V G+QS +QL+D+YG K A +L + Sbjct: 350 RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRS 409 Query: 479 RAFFRSP--SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 K E + +GE E + + G + R+ +V ++ Sbjct: 410 LVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHH---STGRALERVRERVVMPAE 466 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDI 577 I +LPDLT YV G P K+ L+ + P F+ I Sbjct: 467 IANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGTI 507 >UniRef50_B2TH73 Type IV secretion system protein VirD4 n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH73_BURPP Length = 562 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 132/543 (24%), Positives = 219/543 (40%), Gaps = 16/543 (2%) Query: 86 KTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE 145 + F + A L + + A + VA L+ V+ + Sbjct: 32 RLFVLPPAIFLAAWRAAKVTPDVP-AIWVPTAVAFSYGLLVMGVIFGYFKSGFEGADYVM 90 Query: 146 VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRL 205 G ++ + + + + + +RI +PI E +F + G+ GAGKS VI Sbjct: 91 YLRGARMVGHARL--KDMTRKFFYKHLRIAGVPIPEWLEALHFRVIGSTGAGKSVVISDY 148 Query: 206 ANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTAN 265 A R + ++ D +G+F++ +Y D I+NP +AR W ++ E T D + + Sbjct: 149 IESALARRERMICIDPNGQFMEKFYREG-DIIINPFEARTKFWGIFNEIRTPYDVASYSI 207 Query: 266 TLIPMGTKED-PFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSP 324 +LIP + W RTI +E + LV L E+L L ++ Sbjct: 208 SLIPKSPSTEQEIWNAMARTISSEVMLKLWRLGIGDTDHLVYWLTIASNEQLMEMLADTA 267 Query: 325 AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFI 384 A + E+T S+RAVLT Y+ +YL IE F++R+W+ EDQ N W+ Sbjct: 268 ARGMFH-GAEETIGSVRAVLTRYITPHKYLSDIETVEGYFSLREWIDSNAEDQPNVWII- 325 Query: 385 SSNADTHASLKPVISMWLSIAIRGLLAMG-ENRNRRVWFFCDELPTLHKLPDLVEILPEA 443 D ASLKP+IS +A L+ + DE+ +L KL LV + Sbjct: 326 -WREDQLASLKPLISCMFDVACNAALSKPITDETVATHLVVDEVDSLEKLNYLVPAATKG 384 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK--IAEFAAGEIGEKE 501 RK G+QS AQL+ G+ A ++ + + T AE + +GE E Sbjct: 385 RKHRLHICAGMQSDAQLDGTNGKDDAMTVRNSLRTTVALGIAEGDTYTAEQLSKGLGEHE 444 Query: 502 HLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 ++ S S G+++ ++ +V S I LP+LT Y+ L G +P K ++ Sbjct: 445 VIRQRTTASDTGRD-----SHGQEVIKERVVIPSQITGLPNLTGYLKLAGDWPICKFTMP 499 Query: 562 YQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQ 621 Y+ R V FI M+ + A + + A+ E Sbjct: 500 YKKRKAVTEAFIMAQNRWTMDAEAANEQARMDFSRAKRAATDVDARDVDDDDSPSPALES 559 Query: 622 PQQ 624 + Sbjct: 560 SRP 562 >UniRef50_Q7X127 TrwB n=8 Tax=Gammaproteobacteria RepID=Q7X127_XANCI Length = 524 Score = 322 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 119/516 (23%), Positives = 207/516 (40%), Gaps = 33/516 (6%) Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQ--- 137 + G AA V + + L + +V V+ + + L + Sbjct: 17 LPIAGWLAGTYAANVPLSPFPQALTAALHATPNNPFMVGGVVAGLGLAATTGYLFHEYGD 76 Query: 138 --GKQQSENEVTGGRQLTDNPKDVARML--------------KKDGKDSDIRIGDLPIIR 181 + G Q+ + +++ + I IG +P+ Sbjct: 77 DGFRGAPYRRWMRGSQMANWHSVKSKVNAANRRENRRRRAEQRGAKDLPPIMIGPMPMPL 136 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPL 241 E +N + ++GAGKS + + + A +R D + + D +G F + P D ILNP Sbjct: 137 HLENRNTLICASIGAGKSVALESMISSAVKRRDKMAVIDPNGTFYSKFSFPG-DTILNPF 195 Query: 242 DARCAAWDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRNDPNRS 300 D R + W L+ E DFD A ++IP D W R + A+ + N Sbjct: 196 DRRSSGWTLFNEIKGVHDFDRMAKSVIPPQIDPSDEQWCAYARDVLADTMRKLVETNNPD 255 Query: 301 YSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 LV+ L+ E +R +L N+ + E EK SI+ ++ YV+ +R++ Sbjct: 256 QDTLVNLLVREDGEVIRAFLANTDSQGYFRENAEKAIASIQFMMNKYVRPLRFM-----T 310 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN--- 417 F++ W+ D G LFI+ D A+ +P+++ W+ +L++ ++ Sbjct: 311 KGDFSLHKWV----HDPNAGNLFITWREDMRAAQRPLVATWIDTICATILSISDDAQHLS 366 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RR+W F DEL +L KL V + RK G IQ +AQL++ YG+ AA +L Sbjct: 367 RRLWLFLDELESLGKLESFVPAATKGRKHGLRMAASIQDWAQLDETYGKDAAKTLLGCFR 426 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 F + + A+ A+ +G++ + + G + +V S+I Sbjct: 427 NYLIFGASNALNADKASEILGKQHVERIQITTNAGGSGGGGRSRHVVASPPEPVVLDSEI 486 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 +L DL YV +P K+ L Y P A Sbjct: 487 SNLKDLGGYVMFAEDFPIAKIKLPYVKYPHRAAAID 522 >UniRef50_Q3SHV9 Putative type IV secretory pathway VirD4 component n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHV9_THIDA Length = 565 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 108/470 (22%), Positives = 194/470 (41%), Gaps = 20/470 (4%) Query: 102 IWCSEQLWSAFVLAAVVALVICLITFFVVSW--ILGRQGKQQSENEVTGGRQLTDNPKDV 159 ++ ++ LAA ++ +W R G + + G+QL ++ Sbjct: 52 LYVYQRAPGMLGLAAFGGAFGLGWIAWMFAWRPGAARPGDADDDADNLRGQQLV-TVAEI 110 Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIY 219 + ++ + + IG +PI E F L G+ G GKS+ ++ + + G VI Sbjct: 111 KKQIRSAKTKTRLEIGGVPIPIYVEDGGFLLTGSPGTGKSQATTKMLDTLQAGGHRAVIA 170 Query: 220 DRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQ 279 D G F Y + NPLD R +W E + D A +LIP G + W Sbjct: 171 DAEGIFYSR-YAGDGAVLFNPLDRRSVSWSPLAELKSPQDCSALAKSLIPDGHGAEASWN 229 Query: 280 GSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAIS 339 + +T+ ++ ++L IE+L+ L + A +V + Sbjct: 230 DAAQTVLEGLLRRCWETS-KTNAELYRLACVADIEELQQLLAGTAAMTVV--GNARYFGE 286 Query: 340 IRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 +R L Y++ +L F++RD++ ++ GWLFIS + A+L P+I Sbjct: 287 VRPGLGRYLRCFEHLDPAAGRAS-FSVRDFIT-----EETGWLFISYTQEQRAALLPLIQ 340 Query: 400 MWLSIAIRGLLAMGENRN-----RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 L +A R +L++ RR W DELP L ++ L+ +L K G + Sbjct: 341 CTLDVASRAILSLPHTTGDRSKLRRTWLVLDELPLLGRIMSLIPLLTNGSKHGAAVIATA 400 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD 514 Q+ A + YG A ++ + T R + AE+ + +G++E + S G + Sbjct: 401 QTIALFREAYGHDATQTILATLGTWLTLRVSDAETAEYMSKSLGDEEVRRVV--ASGGKN 458 Query: 515 PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 + + + +V S +Q+LP L Y+ + GP P ++L Y Sbjct: 459 DSGKSDNWSEQHSTRRVVMPSQLQNLPRLHGYLNISGPLPVCAVTLPYAD 508 >UniRef50_Q2RLJ0 TRAG protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLJ0_MOOTA Length = 661 Score = 319 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 117/680 (17%), Positives = 213/680 (31%), Gaps = 77/680 (11%) Query: 21 MFSQI----------ANIMLYCLFIFF----WILVGLVLWIKISWQTFVNGCIYWWCTTL 66 MF++I I L+ L + F +L + +W+ W L Sbjct: 1 MFNKIFAGLTEKTGNNGIGLFLLAVGFITSLAVLYIIDVWLLGPVAAIFAAAYKWLAGGL 60 Query: 67 EGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLIT 126 G + + + Q+ T R L + L ++A + AL Sbjct: 61 HGHPNY--TAAWWYFQHPVATARAWLGGHLSQPEVRSWWFGL--NVLIAVMWALRRIAWQ 116 Query: 127 FFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL--------P 178 F I G + +++ T G D+AR+ G I +G L P Sbjct: 117 FDWT--ISKNPGIKIKKDDATYGSARWAVKSDLARVCDF-GFGPGIVLGALGAAPVRIPP 173 Query: 179 IIRDSEIQNFCLHGTVGAGKSEV-IRRLANYARQRGDMVVIYDRSGEFVKSYY-----DP 232 + ++ + G G+GKS +R A + G+ V++ D GE +S Sbjct: 174 KPKTWMNRHVLVVGAPGSGKSRGYVRPNIFAAVRSGESVLVTDPKGELYRSMACWLKSKG 233 Query: 233 SIDKILNPLD-ARCAAWDLWKECLTQPDFDNTANTLIP-----MGTKEDPFWQGSGRTIF 286 K N + + W+ E T D D A +I D FW + + + Sbjct: 234 YTVKGFNLVQMGQSDHWNPLAEIRTPLDADVFAQVVINTTETGPKKGGDAFWDRAEQNLL 293 Query: 287 AEAAYLMRND---PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLV-------EEKIEKT 336 A + + R++ L D L + E++ P + + Sbjct: 294 KALALYVTTELPADKRNFGSLYDILAAGDFEQVDALFAKLPPGHPAKGPYNVYAMAGDNV 353 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 + L ++ + G D + K + DTH + Sbjct: 354 KGGVVIGLGTRLQVFQQEMVRRITG------DSDIDLTLPGKGKCAYFIITPDTHGAFDF 407 Query: 397 VISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 + S+ + L+ + + +V F DE + +P+ + + R G Sbjct: 408 LASLLFTFLFVRLVEVADTSPNGRLPVQVRFLLDEFANIVSIPEFEKKIATVRSRGLDCH 467 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS- 510 +QS QLE YG + +T+ A + + +GE S Sbjct: 468 VIVQSIPQLERKYGR-TWEEIMACCDTKLIIGVKDDTTARYVSRMLGESTVETRSSTREV 526 Query: 511 ---YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS-LKYQTRP 566 +G D S G + + L++ +IQ + C V LP P KL L Y+ P Sbjct: 527 NPIWGQGLFDDKRSLG--ITGRELMTPDEIQKMRSKFCLVFLPDGTPPAKLKVLDYEQFP 584 Query: 567 KVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPV 626 + ++ ++ D + + + V E+ Sbjct: 585 EAKEL-------KKVIVTEKKEEEKELETEDELNDGGNEDYHDTIDRQLVEDGEEKLMEE 637 Query: 627 SPAINDKKSDSGVNVPAGGI 646 + D+ + N G I Sbjct: 638 NIKEGDRVIVTENNTSNGKI 657 >UniRef50_D0L1A2 TRAG family protein n=4 Tax=Bacteria RepID=D0L1A2_HALNC Length = 823 Score = 314 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 110/739 (14%), Positives = 215/739 (29%), Gaps = 87/739 (11%) Query: 36 FFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQV 95 + GL++ + T Y + + V Sbjct: 26 LMGVAAGLLMLFTVMVVTTQ----YLASALDYQAALGSPLIGKLYAPWMFAIWLWQYGNV 81 Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 K +++ A+VL A V + + W + G ++ G + Sbjct: 82 PTLKSIVFI------AYVLLIGGAAVAVIGAALISYWYRRKFGNVGMDS--LHGSAHWAS 133 Query: 156 PKDVARMLKKDGKDSDIR-----IGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR 210 ++ M D I GD+ +R ++ +GK + + Sbjct: 134 EDEIKEMGVFDSAGVFIGAWKNPCGDVQYLRHDGPEHVMAFAPTRSGKGVGL--VLPTLL 191 Query: 211 QRGDMVVIYDRSGE---FVKSYYDPS---IDKILNPLDAR-CAAWDLWKECL-----TQP 258 ++YD GE + + +P D A+++ E Sbjct: 192 AWRHSALVYDIKGENYALTAGWREKEANNRIIRFSPTDITGSASYNPLNEVRLGTQREIA 251 Query: 259 DFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLR 317 D N ++ P G W +G + + + V T LS L Sbjct: 252 DIQNLVTMIVDPDGKGMTDHWAKTGHALLVGTVLHVMYSEEDKTLRGVATFLSDPSRTLE 311 Query: 318 TYLRN---------------SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNG 361 L + +A + K + + + +++ R + Sbjct: 312 ESLAEMINTNHLGDRPHPVVAASARDMMNKADNERSGVLSTAMSFLTLYRDPIVASNTDK 371 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE------- 414 F + D M ++ L++ LKP+I + ++ IR L E Sbjct: 372 SDFAVADLMNA----EQPVSLYLVVPPSDKDRLKPLIRLMINQIIRNLTESMEFKDGRSV 427 Query: 415 -NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 R+ DE P+L +L E L +G Q +QL YG+ S+ Sbjct: 428 AGYKHRLLLMIDEFPSLGRLDIFQEALAFIAGYGMKAYLITQDLSQLYAAYGKD--ESIM 485 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP-VRDGVSTGKDMERQTLV 532 + R + + AE + G +K E +S G + D +ST ++ L+ Sbjct: 486 SNCHIRIAYAPNKIETAELLSKMSGTTTIIKRQESFSGGRTKLMLDQISTSIQEVQRPLL 545 Query: 533 SYSDIQSLP------------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPE 580 + + LP + + G P + Y P F+ R P Sbjct: 546 TPDEALRLPGPQKDGQGNIMEAGDMLIFVAGKAPIYGKQILYFKDP----LFLARAKFPA 601 Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVN 640 +A A A++ E D + A P + + ++ Sbjct: 602 ----PNARPVAAALSAPAHAAVAEIDEQTPQQPAPLKAAPNSVAPPLGKGQTGVAFAPLS 657 Query: 641 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRR-EEV 699 + +E M ++ + + E + + + + + EE+ Sbjct: 658 PTSSSENRETSAVQTTPMTASTSATLNSATFAPAHSPAEESKPHENITAEPESESHGEEM 717 Query: 700 NIN---VHRERGEDVEPGD 715 + V E +D+ P D Sbjct: 718 TADGFAVIPEETQDLLPAD 736 >UniRef50_D1BL71 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL71_VEIPT Length = 638 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 113/627 (18%), Positives = 225/627 (35%), Gaps = 47/627 (7%) Query: 28 IMLYCLFIFFWILVGLVLWIKISWQTFVNGCIY--WWCTTLEGMRDLIKSQPVYEIQYYG 85 + IL+G++L ++ +Y + + + + Y Sbjct: 19 TLAIWKKYLRNILIGVLLLQTLASGGLFYSFLYQSENIISTQNIYVTKEVVLNYINPIKP 78 Query: 86 KTFRMNAAQVLHDKYMIWCSEQ-----------------------LWSAFVLAAVVALVI 122 T++ Q + + L + ++ L++ Sbjct: 79 DTYKTQIGQFIASHTFDFEVNPNNKIPFKNYKDVIDHLTNNQLYTLKENYKKYWLITLLL 138 Query: 123 CLITFF-VVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 L + + G QL + L K + IG++ I Sbjct: 139 SLGISLYWNYSQYLKDTSISKKALHKRGMQLLSQKQI---SLYTKNKPHVLSIGNINIPT 195 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV------VIYDRSGEFVKSYYDPSID 235 D+E ++ + G G+GKS ++ + N +I D EFV + +P D Sbjct: 196 DTECKHILVFGASGSGKSVLLSQFLNQINTYSQKYNDKRHYIITDVKPEFVGKFAEPD-D 254 Query: 236 KILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN 295 I P D R +W ++ + D+D A+ L +DPFW + IFA+ + Sbjct: 255 YIFCPFDKRSISWSIFNDIDDISDYDTFASILFEQEGAKDPFWGLAAGAIFADGLKYLDL 314 Query: 296 DPNRSYSKLVDTLLSIKIEKLRTYLRNSP----AANLVEEKIEKTAISIRAVLTNYVKAI 351 ++ +++ E L + + P + + T SI A L + +K Sbjct: 315 QGRKTNRDILEFF-KQSTEYLTEAINSLPPTLITSKQYLNAPDNTFTSILATLASGLKPF 373 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGW--LFISSNADTHASLKPVISMWLSIAIRGL 409 +L+ N PF+ + ++R + L++ A+ + P++S+ + I I Sbjct: 374 MHLKDSTDNNTPFSFKQYIREEYQRTDGTIPNLYLLVPANRQRIMAPLLSLVMDIMINEA 433 Query: 410 LAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAA 469 L + E++N R++F DE+ +++K+ L +++ + R +G + Q L + YG + Sbjct: 434 LTLPESQNCRLYFIIDEIGSVNKIQLLPDLITKGRSYGISILALTQDPGLLREKYGPQVM 493 Query: 470 ASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQ 529 S + T+ R A+ A G +E ++ E + S +D + Sbjct: 494 QSFLNNFGTQIVLRINDATTAKELADNFGVEEIIEYKESIQLPQNG-SPIPSISQDTTTK 552 Query: 530 TLVSYSDIQSLPDLTCYVTLPGPYP--AVKLSLKYQTRPKVAPEFIPRDINPEMENRLSA 587 +L+ S +QSLP Y + G P V L + P + F P D + + Sbjct: 553 SLILPSQLQSLPPFKGYGKILGFNPFNLVIPQLFFSENPNI-KHFDPIDRKTVNSFKPNI 611 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGE 614 + + E + + GE Sbjct: 612 QPHRIKFNEYKEHRYGEDLINKYKRGE 638 >UniRef50_A9I2I0 Type IV secretion system protein VirD4 n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2I0_BORPD Length = 548 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 123/505 (24%), Positives = 210/505 (41%), Gaps = 47/505 (9%) Query: 103 WCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN----------EVTGGRQL 152 W ++ W +L ++ + +V + ++ G + Sbjct: 41 WNAQTFWHFMILTPQYPVLYGALGIGLVLALALILLIGRTTRTEGFEGAAYKRFVRGTR- 99 Query: 153 TDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRL------- 205 T + K +A ++ GK I +G +P+ +E + + G G+GKS ++R + Sbjct: 100 TTSAKSLALQCEESGKQ-QIDVGGIPMPTANENLHLLITGATGSGKSVLLRNMAASVLRR 158 Query: 206 ---------ANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLT 256 +R D +++ D +G+ + ++ P+ D ILNP DAR W + E Sbjct: 159 SRHTMNNRLLGQMPERNDRMIVIDPNGDLLSKFWQPN-DVILNPYDARSQGWSFFNEVRA 217 Query: 257 QPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKI 313 D+ A++++PM K W GR + E A + S L Sbjct: 218 DYDWKRLAHSMVPMSQDKNAEEWNDFGRLLLRETAKKLHQLQGNEASIMDLFRLCTIEDP 277 Query: 314 EKLRTYLRNSPAANLV--EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR 371 + L+ +L + A +L + K S R VL+N + + F+IRDW+ Sbjct: 278 KVLKQFLEGTLAESLFVGSSEASKALSSARFVLSNKLS-----EHTGMKPGRFSIRDWLS 332 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLH 431 G L+I+ D +S+KP++S W + I +L+M E+ + R W F DEL +L Sbjct: 333 ----KPNGGNLYINWREDMMSSMKPLVSSWADVFITSILSMPESTHLRWWLFIDELASLE 388 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP--SHKI 489 LP L L + RK G V G+QS +QLE IYG A ++ A + Sbjct: 389 ALPSLEAGLTKGRKSGLRVVAGLQSTSQLEHIYGRTMATTIRASFRNLAVLGGSRTDPQT 448 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTL 549 A+ + +G+ E + S D S D + +V+ + IQ+LP L YV L Sbjct: 449 AKDMSESLGKHEVERPKYSISRSVD--HRNTSDNMDRTTEDVVTAAQIQALPPLGGYVAL 506 Query: 550 PGPYPAVKLSLKYQTRPKVAPEFIP 574 G +P ++SL ++ A F Sbjct: 507 AGDFPIARVSLPFRQFGSSAIAFQE 531 >UniRef50_B9BFK1 TrwB protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFK1_9BURK Length = 529 Score = 312 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 115/510 (22%), Positives = 204/510 (40%), Gaps = 34/510 (6%) Query: 85 GKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQG-----K 139 G M + + + + SAF + + + R+ + Sbjct: 21 GAFASMALSGHVPLPFPAGTVRAVRSAFHEPLALWGALPGTCLAAYVAHVCRERLFDGFE 80 Query: 140 QQSENEVTGGRQL----------TDNPKDVARMLKKDGKDS--DIRIGDLPIIRDSEIQN 187 G ++ + K R+ K+ G + +++ + + D E QN Sbjct: 81 GARYARFIRGTRMLNRYQLDAKIRAHNKRYQRVAKQRGDEPRPPVKVCGVEMPTDLETQN 140 Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAA 247 + G G GKS+ I+ L A RGD +V D +G ++ P D I+NP D RC Sbjct: 141 IMIVGAPGTGKSQAIQGLIASALDRGDRMVTVDPNGSLCARFFLPG-DIIINPYDRRCVG 199 Query: 248 WDLWKECLTQPDFDNTANTLIPMG-TKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVD 306 W L+ E DFD +++ IP + W G R++ ++ + ND LVD Sbjct: 200 WSLFNEAGHDFDFDRLSHSSIPPQVDAQAEEWAGYARSLLSDTMTRLHNDDMPDMRVLVD 259 Query: 307 TLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI 366 + E L +L + +A + E+ SI L Y++ + + F+I Sbjct: 260 LTTRERREVLSKFLEQTGSAGFFAKDAERATASIIFTLNKYIRPLIKIPD-----GDFSI 314 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDE 426 R WMR D+ G ++I+ D +L P I +WL + +L+ + +RR+W DE Sbjct: 315 RKWMR----DESAGNIWITWREDQRTALGPTIPIWLDLVFAMILSDAPSFSRRLWVNMDE 370 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPS 486 L ++ +L + + RK G C V G+Q QL G A ++ + + Sbjct: 371 LASIGRLYSFEPAVSKGRKHGLCVVGGLQDVVQLRMNLGHDPADAVLACFRSMLALGGAN 430 Query: 487 HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQ--TLVSYSDIQSLPDLT 544 + A +G + + + G + ++T + + LV+ S + +LPDL Sbjct: 431 AVTTKTLAAMLGSHDVER----HPIGVNQQWWNLNTRERKIDRDEPLVTPSQLANLPDLQ 486 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 Y+ +P K+ + P PEF+P Sbjct: 487 GYLKYGKDWPLTKVKFTARDYPVRHPEFVP 516 >UniRef50_A3EW05 Putative plasmid transfer factor (TraG) n=1 Tax=Leptospirillum rubarum RepID=A3EW05_9BACT Length = 657 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 86/632 (13%), Positives = 188/632 (29%), Gaps = 82/632 (12%) Query: 82 QYYGKTFRMNAAQVLHDKYMIWCSEQLW-----SAFVLAAVVALVICLITFFVVSWILGR 136 G F L+ + + + + +LA + + + W + Sbjct: 36 PALGAPFLSLHGFGLYSPWAFFGWFRFLFVPEAAPPLLAGTIIFMTGGVVATGGLWYVVN 95 Query: 137 QGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL------PIIRDSEIQNFCL 190 + G P+++ + +S + +G + +R ++ Sbjct: 96 RSNMAERKSTLHGSAHWARPEEIRKTGLLS--ESGVYVGAITDGSRTRYLRHDGPEHLLA 153 Query: 191 HGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSI---DKILNPLDAR 244 +GK + + V+++D GE + + +P DA Sbjct: 154 FAPTRSGKGVGL--VIPTLLTWPHSVLVHDIKGENWALTAGWRQKELGSLCLKFDPTDAS 211 Query: 245 --CAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYL-MRN 295 ++ E D N A ++ P G + W +G + A + Sbjct: 212 GGSCRFNPLSEIRIGTDREIQDVQNIATMIVDPDGKGLNDHWAKTGFALLVGAILHVLYA 271 Query: 296 DPNRSYSKLVDTLLSIKIEKLRTYLRN----------------------------SPAAN 327 + +++ + + + +L + +A Sbjct: 272 EKDKTLRGVARFISNPSAASDTEFLETMKSTRHDHEYSRGWFDRNGGPTATHPVVAESAQ 331 Query: 328 LVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISS 386 + K + + + +++ R + F + D M K L+I Sbjct: 332 EMLNKADNERSGVISTAMSFLSLYRDPVVAKNTEVSDFMLTDLMNA----DKPVSLYIVV 387 Query: 387 NADTHASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLVE 438 LKP++ + ++ +R L R+ DE P L KL E Sbjct: 388 PPSDKDRLKPLVRLVINQTVRRLTETMAFSDGRSVAGYKHRLLLMIDEFPALGKLDIFSE 447 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 L +G Q +QL Y ++ + R F + A+ + G Sbjct: 448 ALAFIAGYGLKAYLITQDLSQLYAAYTRD--EAILSNCHIRIAFAPNKPETAKLLSEMCG 505 Query: 499 EKEHLKASEQYSYGADPV-RDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVK 557 + +A+ +S G + G+ + L++ + SLP V + G P Sbjct: 506 KTTVFRATTSFSGGRFSWILKSKTIGEQEFGRDLLTLDEAMSLPAEESLVFVAGQSPIRG 565 Query: 558 LSLKYQTRPKVAP--EFIPRDINPEMEN------RLSAVLAAREAEGRQMASLFEPDVPE 609 ++Y P+ + P D + + RL V G A P+ Sbjct: 566 RKIRYYEDPEFSRRARISPPDRSDRLREVLPPGSRLPGVAPESRLSGDPGADPIRPEQSG 625 Query: 610 VVSGEDVTQAEQPQQPVSPAINDKKSDSGVNV 641 + + + ++P+ P +D ++ + Sbjct: 626 LPLPPEDGENDEPENRKFPDSSDSGTNVEETL 657 >UniRef50_Q3SI88 Putative type IV secretory pathway VirD4 components n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SI88_THIDA Length = 784 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 137/690 (19%), Positives = 255/690 (36%), Gaps = 52/690 (7%) Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 W L+ +P G+ LHDK + + + +A V + Sbjct: 41 WGWVLQSQGLGFHVEPALHHLLPGRQL----GDRLHDKTVAFMQAEHPAALKALEVGPQI 96 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS-DIRIGDL--P 178 L+ +V W++ +++ GR+ +A +K +G+ + +RI P Sbjct: 97 AGLLAGGLVFWMVYGDVVIATQDRHIRGRRRLKGAAALAAWVKDEGEAADGLRIHPKLPP 156 Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY-----YDPS 233 I + E ++ + G VG+GK++ + L AR+RGD +I+D G+F + Sbjct: 157 ISKSRETRHILIVGGVGSGKTQTLLPLMRAARERGDRAIIFDFKGDFTPDFPSCTARHKG 216 Query: 234 I-----DKILNPLDARCAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIF 286 D I P D+R W + ++ T A +I P G P W + R + Sbjct: 217 RAIEVEDVIFAPWDSRSTLWAVARDVDTLSAAREFAARMIVEPGGGSGSPMWANAARQVL 276 Query: 287 AEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN---LVEEKIEKTAISIR 341 +++ + ++ LV L +++L R L + + T I+ Sbjct: 277 VACLVELQSTKPGDWGFADLVAGLTR-PVDQLTEAARRYFPEAVKALGDGQQNVTTAGIQ 335 Query: 342 AVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 L +Y+ I L F+IR+W+ V ++ + + + + S Sbjct: 336 INLMSYLAVIFDLARAWPGPGIFSIREWLTEV-GARRVKTVILQHDGRFETLARAFNSAV 394 Query: 402 LS---IAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 L I+ L +++ R++W F DE P L K+ ++ + R G V G+Q + Sbjct: 395 LGLAGQLIKSNLVR-DSKERKLWLFLDEFPELGKVETVLSLAAVGRSKGIRVVLGLQDIS 453 Query: 459 QLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAG-EIGEKEHLKASEQYSYGADP-- 515 Q++ IY E S+ ++ T+ + + A++ A IG+++ + + GA Sbjct: 454 QVKKIYSEHDTNSIVSMVGTQVIAQVSPGETAKYIAENLIGDRDLERLGVSITSGAGRAP 513 Query: 516 ---VRDGVSTGKDMERQTL-VSYSDIQSLPDLTCY----VTLPGPYPAVKLSLKYQTRPK 567 G T K +++ L V S++ L V + G V L + P Sbjct: 514 GIFTSGGNRTSKWEDKRELVVLPSELLQLGPDLDLGGVKVWMSGIGEDVLEVLIPFSDPN 573 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 F P + + + +A A Q S P E + DV P S Sbjct: 574 ---HFRPSSVIADWTRYPNQPIAPAVATPAQEPSQPVPSWAEEAAEADVA--PLLVTPTS 628 Query: 628 PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPP-GISESGEVVDMAAYEAWQQENH 686 PA+ + ++ + + P E P + GE + A ++ Sbjct: 629 PAVTPVANPWADDIDGDEAGEGEESAPAPETTTATDPLAFLDDGESTEKTAAAEFETRML 688 Query: 687 P-----DIQQQMQRREEVNINVHRERGEDV 711 P Q Q +EE ++ E + V Sbjct: 689 PIATPLSSQLADQAKEEATESIAGELAQQV 718 >UniRef50_C1F4S3 Conserved domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4S3_ACIC5 Length = 674 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 122/530 (23%), Positives = 218/530 (41%), Gaps = 27/530 (5%) Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTD----NPKDVARMLKKDGKDSDI--RI 174 +I I F++ Q ++ GR+L +P+ R+++ DG ++ R Sbjct: 155 IISGILVFILPLPYWIGRDIQRRKQIKYGRRLRGPILVSPRTFNRLVRGDGVGFNVSSRG 214 Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY-DPS 233 L I R +E ++ + G G+GK+ +I +L ++RG ++YD + EF++ +Y + Sbjct: 215 QPLRIPRAAEDRHIEIIGDTGSGKTTLIMQLLRQVQERGHPAIVYDPACEFIQRFYSEKR 274 Query: 234 IDKILNPLDARCAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIFAEAAY 291 D +LNPLD RC W +E + + + A +L P + F+ + + IFA+ Sbjct: 275 HDIVLNPLDRRCPYWGPSEELVRRSEARTLAASLFQHPDERTKHEFFIETPQKIFAKLLL 334 Query: 292 LMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 + + +L++ + + ++ ++ + A ++ + + L + Sbjct: 335 DL-----PTPQQLIEWMSNE--AEIDKRVQGTELAAMIHPSAPQQRSGVLGSLNLVADSF 387 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 R L + +T R+W + + GW+FI S A +L+P+ S W+ + + LL Sbjct: 388 RLLPSKDEAKREWTAREWSKH-----RQGWIFIPSQASEREALRPLHSFWIDMLVLRLLT 442 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 VWF DEL TL KLP L + E RK G V G Q AQLE IYG A Sbjct: 443 APSPNQPPVWFVLDELATLQKLPQLHTAITENRKSGNPLVLGFQGKAQLEVIYGH-LAEV 501 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 + TR F ++ + A++ + IG E + E +G G + D + + L Sbjct: 502 MLSQPATRIFLKTGEPEAAQWVSRAIGNVEVERVKETRYHGGGM---GQNFTVDRQIEPL 558 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 V S+I + + Y+ + P P+FI R + + Sbjct: 559 VLDSEISGMEPMRAYLKHGNY--VARFGFHPVKIPDDKPKFIERLHSDYIVRDAKPDAQN 616 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNV 641 A EP P V + Q + + D + D + Sbjct: 617 EPAGQSNGNHSREPVSPPEVEESNGVQKGARKSGTANKPKDDRIDKQTEL 666 >UniRef50_A7HU67 TRAG family protein n=108 Tax=Bacteria RepID=A7HU67_PARL1 Length = 687 Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats. Identities = 105/641 (16%), Positives = 193/641 (30%), Gaps = 70/641 (10%) Query: 33 LFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNA 92 I F I++ L +W W G + + + + + Sbjct: 11 ALIVFAIVI-LGVWTAT-----------QWAAFALGFQARLGAPWFILLSWPVYYPWRLF 58 Query: 93 AQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQL 152 + A ++ VA I S RQGK + T G Sbjct: 59 EWWYAYEAYAPGVFTRAGAIAASSGVAGCAVAIAG---SLWRARQGKLVT----TYGSSR 111 Query: 153 TDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 ++ R + +R ++ +GK + + Sbjct: 112 WAKRGEIERAGLFRAAGVFLGRLGEQYLRHDGPEHVMAFAPTRSGKGVGL--VVPTLLSW 169 Query: 213 GDMVVIYDRSGE---FVKSYY-DPSIDKILNPLDARCAAWDLWKECLTQP----DFDNTA 264 VI+D GE + S + NP D R A ++ E P D N A Sbjct: 170 TGSAVIHDIKGENWQLTAGWRSRFSHCLLFNPTDPRSARYNPLLEVRKGPDEVRDVQNIA 229 Query: 265 NTLIPMGTKED--PFWQGSGRTIFAEAAYL-MRNDPNRSYSKLVDTLLSIKI---EKLRT 318 + L+ + W+ + + A + + ++ +++ L + LR Sbjct: 230 DILVDPEGALERRNHWEKTSHALLVGAILHVLYAEEEKTLARVATLLSDPRRSFEHTLRA 289 Query: 319 YLRN---------------SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP 363 + + AA V K + + + +++ R Sbjct: 290 MMATNHLGTPEHPEVHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPIVAATI--- 346 Query: 364 FTIRDW-MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM--GENRNRR- 419 + DW + + + + L++ + KP+ + L+ R L G+ RR Sbjct: 347 -SACDWRIADLVDAARPVSLYLVIPPADISRTKPLARLVLNQIGRRLTEKLEGDPAKRRR 405 Query: 420 --VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 + DE P L +L L +G QS Q+ YGE A + D + Sbjct: 406 YGLLMMLDEFPALGRLDFFETALAFMAGYGIRAYLIAQSLNQISKAYGENNA--ILDNCH 463 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY-SYGADPVRDGVSTGKDMERQTLVSYSD 536 R F S + A+ + +G L+A Y + P V + + L++ + Sbjct: 464 VRIAFSSNDERTAKRISDALGTATELRAQRNYAGHRLAPWLSHVMVSRQETARPLLTPGE 523 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLA------ 590 + LP V + G P L+Y P + E R Sbjct: 524 VMQLPSADELVLVSGLAPIRAKKLRYYEDKNFTERVKPAPVLAENGYRDRPAPRPDDWSG 583 Query: 591 AREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIN 631 ++A+ PD P+ E+ +Q + P PA Sbjct: 584 QVRGLDHRLATASVPD-PDAGLAEEEGGLQQQRHPGRPAKE 623 >UniRef50_A4XMT9 TRAG family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMT9_CALS8 Length = 628 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 105/648 (16%), Positives = 219/648 (33%), Gaps = 66/648 (10%) Query: 30 LYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFR 89 F++L G ++ + + + + + + I++ P+ Sbjct: 8 FVAAVALFYLLTGYIIGMLTDFLKMNQESFF--FSPEKAQQIKIQTDPIKA--------- 56 Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGG 149 L + + ++ W F ++A ++ L+ + +L + + T G Sbjct: 57 ------LKNVFANPDIQKAWLGFTTFILIAGILMLLPYKERMKLLFGN-QAAKDPRGTYG 109 Query: 150 RQLTDNPKDVARMLKKDGKDSDIRIGD-----LPIIRDSE-IQNFCLHGTVGAGKSE--V 201 K+ ++L + + +G + + S ++ + G GAGKS + Sbjct: 110 TSDWMTEKEARKVLGFNK--PGLILGKISNELVTLPFSSRFNKHVMVLGATGAGKSRTFI 167 Query: 202 IRRLANYARQRGDMVVIYDRSGEFVKSYYD-----PSIDKILNPLDAR-CAAWDLWKECL 255 I + + G +VI D SGE ++ Y K LN +D W+L Sbjct: 168 IPNVI-ALAEAGHSMVITDPSGEILEHTYKYLLKKGYFVKALNLVDFTLSDPWNLLDSIE 226 Query: 256 TQPDFDNTANTLIPMG----TKEDPFWQGSGRTIFAEAAYLMRND------PNRSYSKLV 305 + D A+ +I DPFW + + +++ ++ +K+ Sbjct: 227 NEEDAQVFADIVIKNTEAGRKSGDPFWDRAELNLLKALVLYVKDKDGYVPVEKQNMAKVY 286 Query: 306 DTLLSIKIEKLRTYLRNSP-------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 D L S + N P A NL + EK + L ++ + Sbjct: 287 DLLASKDPAMIAKLFENLPDDKAAKMAYNLYSQVNEKVKSGVVMGLGTRLQLFQNKLV-- 344 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN--- 415 + + + QK + I D H++ + S++ S L+ + + Sbjct: 345 --RRITSYSEIDLLAPKLQKTAYFCII--PDQHSAYNFMSSLFFSFLFIKLVKLHDTTDN 400 Query: 416 ---RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 RNR V+F DE + ++PD + + RK IQS QLED Y + Sbjct: 401 KDIRNRHVYFLLDEFCNIGEIPDFTKKISTIRKRNLHCQIVIQSIPQLEDRYPGGQWKEI 460 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 +T AE+ + +G K S + + + + + + ++ L+ Sbjct: 461 IGNCDTFLCLGVNDPDTAEYVSTLLGIKSIQTRSTSHPGDFNAIFETERITQSVGKRLLL 520 Query: 533 SYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP-EFIPRDINPEMENRLSAVLAA 591 + +++ V L G P + + + + EFI + E S Sbjct: 521 NPDEVKKFDADKNIVLLRGKNPLITEKVFFDRMKQAKELEFISLANYKQKELSSSQTPEQ 580 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGV 639 + +++ F + E Q+ + ++ DS + Sbjct: 581 SYYQQQKLQQEFSCEAQAKEQKEKEQAV-AAQEAKALPEEAQEEDSEL 627 >UniRef50_B3ENB4 TRAG family protein n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ENB4_CHLPB Length = 756 Score = 305 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 113/760 (14%), Positives = 216/760 (28%), Gaps = 117/760 (15%) Query: 39 ILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHD 98 + GLV + W + G I + + Sbjct: 14 VSAGLVFTLLGMWCSTQYVAYALGYQPALGKPVFILNG-------------YPLYEPWLW 60 Query: 99 KYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKD 158 Y + E A F + +L + + G N K+ Sbjct: 61 MYWAYHFEPYAPQVFDMASWITYTSFFVMFGLMVVLAIRRARYRSASGVYGTARWANRKE 120 Query: 159 VARMLKKDGKDSDIRIG--------------------------DLPIIRDSEIQNFCLHG 192 + R+ + K + G ++R + ++ Sbjct: 121 LERVGLLEDKGVILAQGNDAKFHSVVKTDASGDVNVQWVMDREGKEVLRHNGPEHVFCFA 180 Query: 193 TVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF---VKSYYDP-SIDKILNPLDARCAAW 248 +GK + + V+YD E + S P + Sbjct: 181 PTRSGKGVGL--VIPTLLTWTGSCVVYDIKKENWAATSGWRRKFSHCLRFEPTTPGSVRF 238 Query: 249 DLWKECL----TQPDFDNTANTLIPMGTKED--PFWQGSGRTIFAEAAYL-MRNDPNRSY 301 + E D N A+ L+ + W + TIF A + + ++S Sbjct: 239 NPLLEIRKGLYEVRDAQNIADILVDPEGSLERRDHWDKTAHTIFVGAILHILYAEKDKSI 298 Query: 302 SKLVDTLLSIKI---EKLRTYLR-----NSPA------ANLVEEKIEKTAISIRAVLTNY 347 + LV L E L L N+P A K + + + Sbjct: 299 AGLVGFLSDPDRSIEETLHYMLNTQHLTNAPHPVVASCAREALNKSPNELSGVISTAMTF 358 Query: 348 VKAIRYLQGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI 406 + R E+ F I D M ++ L+I KP+I + L+ Sbjct: 359 LALFRDPIIAENTAVSDFHIEDLM----NSRRPVSLYIVVPPSDIDRTKPLIRLILNQMG 414 Query: 407 RGLLAMG--------------------------------ENRNRRVWFFCDELPTLHKLP 434 R L E R+ DE P+L +L Sbjct: 415 RRLTEKMTFRQMKSGKDASALNVLLKNMQRPNDKLTAQKEQPKHRMLLMLDEFPSLGRLS 474 Query: 435 DLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAA 494 L +G + QS Q+E YG+ S+ D + R + + + A+ + Sbjct: 475 FFETELAYLAGYGIKCIMISQSLNQIEKAYGQN--NSILDNSHVRITYGALDERTAKRIS 532 Query: 495 GEIGEKEHLKASEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY 553 +G+ + ++ P V + + L++ +I LP + + G Sbjct: 533 DLLGQATEKRRQMNFAGSRLAPWLGHVMETEQESPRPLLTPGEILQLPGDDALLMVGGIP 592 Query: 554 PAVKLS-LKYQTRPKVAPEFIPRDINPEME-----NRLSAVLAAREAEGRQMASLFEPDV 607 P + YQ ++P E + + + R +AS+ Sbjct: 593 PYRAKKVMYYQDDRFKERAWLPAPDTDEEQVAELFKSQTLRNDWCIDDDRDVASMQNQPN 652 Query: 608 PEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGIS 667 +V + +TQ + + + + + + + EE++ S Sbjct: 653 KDVRDDDGITQPDHSGSAIGGKECETGQEDQKWEKDLE-KDAILLALEEKVLSD----ES 707 Query: 668 ESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRER 707 E + A EA +N +Q++M+R +E N ++ R Sbjct: 708 EQKALFASANEEAELSQNQKVLQEKMRRAQERNRSIELSR 747 >UniRef50_A5V2N2 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2N2_SPHWW Length = 578 Score = 304 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 114/455 (25%), Positives = 197/455 (43%), Gaps = 17/455 (3%) Query: 115 AAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI 174 + +A+++ F+ + R G ++ L + + Sbjct: 134 SWPLAVMMPATFAFLGGAVAARLAAPPRRVRHLRGTKMRPAVSAWRGRLWAR-LTGGLTL 192 Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 +P+ R+ E + G G+GKS + L A +RGD ++ D G + +++ Sbjct: 193 AGVPLSREDETMHVAAIGATGSGKSTALHGLMAGALRRGDRHIVADPEGAAMSAFFADG- 251 Query: 235 DKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAAYLM 293 D +L+P DARCA WDL E + D+ A++L+P +GT + W + + A+ Sbjct: 252 DILLDPFDARCARWDLLAEIESPSDYAFLASSLLPHLGTGDHDQWISYAQRLLADTMENF 311 Query: 294 RNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY 353 S S V L S +I +L+ + +A EE E+ SI L V +R Sbjct: 312 VTLELGSTSDYVALLGSARIAELKELCAGTSSARYFEEGGERMLASILGTLAPAVAHLRL 371 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 + +GE F++R W+R + G L++ A+ A+++ ++S W++IAI L++ Sbjct: 372 IAMA--SGEVFSLRRWIR-----EGRGSLWMPYAANQVAAMRGLVSCWMNIAILETLSLP 424 Query: 414 ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLF 473 +R+RR+WF DEL L ++ L + RK GGC G QS+AQ++ +YGE AA ++ Sbjct: 425 ASRDRRIWFHIDELDALGRIEGLKDAQARLRKVGGCVAIGFQSFAQVKHVYGE-AAHTIV 483 Query: 474 DVMNTRAFFRS---PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMER-- 528 + R A A IGE+E + S ST R Sbjct: 484 ENCGNLLILRCGGGGDESTANLANELIGEREAERDDLSRSQSRG-RNASQSTSVQSRRSV 542 Query: 529 QTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 V S+I LP+ +V ++ ++ Sbjct: 543 DPAVLASEIMQLPNREGFVKRALDPRWQRVRFPFR 577 >UniRef50_B6AM17 Plasmid coupling TrwB n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AM17_9BACT Length = 425 Score = 304 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 106/430 (24%), Positives = 192/430 (44%), Gaps = 27/430 (6%) Query: 165 KDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQ------RGDMVVI 218 K RI + R +E+++ + T G+GKS++I +L N + + +I Sbjct: 6 FGKKTIPFRIPGIEFPRGAELEHILIPATTGSGKSQLIHQLLNRVLEGIDTAPDREKALI 65 Query: 219 YDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP--MGTKEDP 276 D +G+F ++ + D++LNP D R W+ + E + D+ A IP G ++ Sbjct: 66 TDPNGQFAETRGYKN-DRVLNPFDRRSMKWNPFSEIKNEYDYKLLAAAAIPSADGKGDET 124 Query: 277 FWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKT 336 W+ + + A+ + ++ L + E LR YL + + +L+ ++ Sbjct: 125 EWRKYAQDMLADLMKGLHRAEKTDPREVQRLLSMVDPEALRPYLSGTSSESLLSGPNDRY 184 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 S+ VL+N + A +L+ F+IR+W+R G LF++ +++P Sbjct: 185 FGSVIGVLSNALAAWEFLEPD----GEFSIREWVRA-----GKGCLFLTYTDAQIEAMRP 235 Query: 397 VISMWLSIAIRGLLAMGENRN------RRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 ++ WLS+AIR L++ + RRVWF CDEL +L + L + L RK G Sbjct: 236 LLGCWLSLAIRETLSLPIEVDDRGLALRRVWFVCDELDSLGTVHGLSDALSRGRKPGLAV 295 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ-- 508 + IQS AQL YG+ +A+L + R + A + +G+ E S Sbjct: 296 ISAIQSIAQLRTRYGKDGSAALLACYVNKLVMRQGDFEDARHWSDYLGQTEEEWISRTWG 355 Query: 509 -YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 S G + + E + L+ S++Q +P Y + G + ++ PK Sbjct: 356 HSSSGGGHASENQTLAARREIRQLLLPSELQEIPKFCGYARISGLSGIRPFRFEPRSFPK 415 Query: 568 VAPEFIPRDI 577 VA F+P+++ Sbjct: 416 VAEAFLPKEV 425 >UniRef50_B6AM16 Conjugation TrwB n=4 Tax=Leptospirillum sp. Group II RepID=B6AM16_9BACT Length = 647 Score = 302 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 106/433 (24%), Positives = 187/433 (43%), Gaps = 20/433 (4%) Query: 184 EIQNFCLHGTVGAGKSEVIRRLAN---YARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP 240 ++ + G G+GK++ I R+ + + G+ ++ D G+F + S D +LNP Sbjct: 78 PTKHMIIGGGTGSGKTQAIHRVLDRVFWGVSNGEKAIVTDSGGQFFSTRSRKS-DLLLNP 136 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPF---WQGSGRTIFAEAAYLMRNDP 297 D R +W+ + E Q D+++ A TL+P + W R + + + + Sbjct: 137 FDGRSVSWNPFSEIENQWDYESLAETLVPGKSGPGAMADDWIRYARGLISSIMKGLAEEG 196 Query: 298 NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 N ++ + LL +EKL YL +P L+ ++ S+ V + ++ +YL Sbjct: 197 NPDPRRVPE-LLRGDMEKLAPYLAGTPEEALLNPASDRFLGSVVGVASLALRPWQYLSPD 255 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 F+IR W+R D G LFI+ + +K +I WL IAI +L + + Sbjct: 256 ----GDFSIRKWIR----DGAGGTLFITYKDAQMSLMKDLIGAWLGIAITEVLDLSPDFE 307 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 RRVW DEL +L + L RK+G C + IQS AQL++ YG+ +L + Sbjct: 308 RRVWLVEDELDSLGTVAGLANANTRGRKYGLCSIGAIQSIAQLDEKYGQLGGQTLLSTFS 367 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV---SY 534 ++ FR S K +E+ + E+G++E + S D ST + + ++ Sbjct: 368 SKIIFREGSWKDSEYWSNELGQREITEQSITK-ASTSSRHDNSSTETVAQTRKVIQTVLP 426 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREA 594 S++ LPD T Y PG K+ + + + P F+P + + + Sbjct: 427 SELAELPDRTAYCRFPGMEGIHKIEFEIRKYKPIRPAFLPPGEPEPSFDDPKLEIVEKPV 486 Query: 595 EGRQMASLFEPDV 607 P Sbjct: 487 PEEPSRIPILPVA 499 >UniRef50_Q21BL2 Putative type IV secretory pathway VirD4 components n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BL2_RHOPB Length = 602 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 117/614 (19%), Positives = 232/614 (37%), Gaps = 33/614 (5%) Query: 21 MFSQIANIMLYCLFIFFWILVGLVL--WIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPV 78 M + I F G + V + + + + Sbjct: 1 MTRHLRIITFVAAMSCFAFAAGSYQLGFEVWPLGVTVADGTTVPYRSAQVHACVSQRILG 60 Query: 79 YEIQYYGKTFRMNAAQVLHDKYMIWCSE-QLWSAFVLAAVVALVICLITFFVVSWILGRQ 137 + G+ + + Q L + E + W+ F + +A ++ L F + + Sbjct: 61 WFGDRNGEAYWLLCRQQLSQSRALDGFEIRFWTVF--GSSIAALVALFGFALSLRLDSPA 118 Query: 138 GKQQSENE-VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGA 196 K GG L + A + G+ + + +PI R+ E ++F + G+VG Sbjct: 119 LKIIRGARLHAGGPGLKAFARAAAVECRIHGEGVAL-VPAIPIGREREARHFLILGSVGG 177 Query: 197 GKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLT 256 GK++ + L + A RGD +++ D G+ + ++ P D R WD+ +C Sbjct: 178 GKTQTMLNLIDGANARGDGILVLDTKGDMMGGLPAQGDPLLVAPHDRRSLVWDVAADCSI 237 Query: 257 QPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY-SKLVDTLLSIKIEK 315 + D A IP + DP W + + IF ++ + + ++ +++ +++ Sbjct: 238 KQDARELAARFIPPSS--DPMWSQAAQEIFVACIVHLQATRGQDWGWADLEAVVTADVDQ 295 Query: 316 LRTYLRNSP--AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP--FTIRDWMR 371 L + ++ A L+ + KT SI +++ + L + F+IR W+ Sbjct: 296 LTVFAKDHNPNALRLLNQPDSKTTQSILTTFQTHMRIVSVLAEAWPDRSAERFSIRAWLH 355 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL--LAMGENRNRRVWFFCDELPT 429 + L + + + I L + + + E+R RRVW F DE P Sbjct: 356 KPIPYRP---LILQHDPGYPELSRIWIGSMLGLLASAVGSPTLSESRQRRVWLFLDEFPQ 412 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 L + L R G V G Q AQ+ +YG+ A S F + T+ R + + Sbjct: 413 LPPIKQFATFLELGRSKGVAVVIGAQDTAQIRAVYGQDQAKSWFGMTGTKIITRINASEA 472 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS-LPDLTC--- 545 AE + IG++E ++++ + + V+ E + +V+ S++ S L Sbjct: 473 AEDISRLIGDQEVERSTQSATRTSGKT--SVTESIQREIRRVVTASELASHLGPTKGGVR 530 Query: 546 YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP 605 + + +L L Y + PK+ +P D + AR ++ ++ EP Sbjct: 531 VLFIGLGEDVYELELPYLSLPKLREPIMPAD--------WTQPSVARASKTDSGETIPEP 582 Query: 606 DVPEVVSGEDVTQA 619 P +D+ Sbjct: 583 SPPPSRLTKDLADK 596 >UniRef50_B1L333 ATPase involved in conjugal plasmid transfer n=3 Tax=Clostridium botulinum RepID=B1L333_CLOBM Length = 648 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 91/611 (14%), Positives = 203/611 (33%), Gaps = 39/611 (6%) Query: 47 IKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSE 106 +K + + IY + + V + K + +++ Sbjct: 7 LKKALKKSTRKIIYTVLYIFSMIYATTPAILVTKNMLDPKNKGKITEVLKYNELYKKPFT 66 Query: 107 QLWSAFVLAAVVALVICLITFFVV------SWILGRQG----KQQSENEVTGGRQLTDNP 156 L F+ ++ V +I + +QG + ++ T G + Sbjct: 67 TLKYFFINPSLWLSVFSIIIIAAILIVIIVFLNKEKQGINNNVKYLKDNGTHGTANWMDE 126 Query: 157 KDVARMLKKDGKDSDIRIG-----DLPIIRDSE--IQNFCLHGTVGAGKSEV-IRRLANY 208 ++ ++L + I G ++ + D+ +N + G G GKS +R + Sbjct: 127 EESKQLLNIGNRVDGIIYGALNGKNVALPFDTWKFNKNVAIFGAPGTGKSRFYLRTVVCQ 186 Query: 209 ARQRGDMVVIYDRSGEFVKSYY-----DPSIDKILNPLD-ARCAAWDLWKECLTQPDFDN 262 Q +VI D GE ++ K+ N ++ W+ E Sbjct: 187 LVQNKKSIVITDPKGELMRDLKVFLESQGYDVKVFNLVNMKNSHRWNPLNEVADDLSAQV 246 Query: 263 TANTLI----PMGTKEDPFWQGSGRTIFAEA-AYLMRNDPN--RSYSKLVDTLLSIKIEK 315 + T+I P+G+K D FW+ + + Y++ P R+ ++ L +++ Sbjct: 247 FSQTIIDNTKPVGSKGDEFWEKGEQNLLKALTLYVIYELPESERNLREMYSLLAGKDVKE 306 Query: 316 LRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR-GVR 374 + P + ++ + + S V + + + + N + + + Sbjct: 307 MDRLFSALPGDHPAKQPYKLFSQSADNVRSGMIIGLGTRLQVFQNQLVQALTETSDIDLS 366 Query: 375 EDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE----NRNRRVWFFCDELPTL 430 K + +D ++ + ++ S L+ + + V+F DE P + Sbjct: 367 APAKKPCAYFCITSDMTSTFDFLSGLFFSFLFINLVNYADLHSGKCDPEVYFMLDEFPNI 426 Query: 431 HKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIA 490 +PD + + R G Q+ AQL++ Y + + +++ F A Sbjct: 427 ASIPDFQKKISTMRSRGVHCHVIFQNIAQLQNRYPNFGWSEIIGNCDSKLFLGCTDLLTA 486 Query: 491 EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP 550 EF + +G +S S G + + D ++ L++ +I P + L Sbjct: 487 EFVSKLLGITTVEDSSNSKSGGLEGLFDFGKNTTRATKRNLLNPDEILQFPTDKEILMLK 546 Query: 551 GPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEV 610 G P + Y+ P ++ F P +I + + EP Sbjct: 547 GQKPLILDKRSYEFHP-LSKNFKPIEITDFEPEWSKGKDFSYHKK--SPIDDIEPISSIN 603 Query: 611 VSGEDVTQAEQ 621 E++ + Sbjct: 604 KDIENMIKDNN 614 >UniRef50_B9MP28 TRAG family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP28_ANATD Length = 625 Score = 299 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 92/631 (14%), Positives = 190/631 (30%), Gaps = 55/631 (8%) Query: 53 TFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAF 112 + Y L GM SQ +E GK+ ++ V+ + S Sbjct: 8 VAILVIYYLIMAYLIGMFSGAISQDAWEQIMAGKSPKI----VIQTDPVAALGSVFHSPA 63 Query: 113 VLAAVVALVICLITFFVVSWILGRQ-------GKQQSENEVTGGRQLTDNPKDVARMLKK 165 VL + + L+ V R + ++ T G + ++ K Sbjct: 64 VLRIWLGVATVLLVVAGVFIFAYRDELKIHFGKEVPADERNTYGSADWMKQSEAKKVFKF 123 Query: 166 DGKDSDIRIGDLP-----IIRDSE-IQNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVI 218 + I +G + + D++ ++ + G G GKS R + G +++ Sbjct: 124 GSEQKGILLGKVKGQRVVLPADTKYNKHIAIFGAPGTGKSRTFARPNIVQIAKMGQSMIV 183 Query: 219 YDRSGEFVKSY-----YDPSIDKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMG- 271 D GE + K LN ++ W+ D A+ +I Sbjct: 184 TDPKGELFEDMSVWLEKQGYDVKALNLVNIECSDRWNPLDAVADDMDATVFADVVIRNTQ 243 Query: 272 -----TKEDPFWQGSGRTIFAEAAYLMRNDP---NRSYSKLVDTLLSIKIEKLRTYLRNS 323 DPFW + + ++ ++ +L L + + L++ N Sbjct: 244 AGMRKAGGDPFWDRAELNLLKALVLYIKETRPAQGQNLGELYRLLATTNMAGLQSMFMNI 303 Query: 324 P-------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED 376 P A N+ + E+ + L ++ + + + D + Sbjct: 304 PNDRASKMAYNIFAQASEQVRTGVIIGLGTRLQVFQNRLVQKMTE----VSDIDLEAPKR 359 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIA----IRGLLAMGENRNRRVWFFCDELPTLHK 432 +K + I S+ S + + E R R V+F DE P + + Sbjct: 360 RKVAYFCIISDTHRAFSFLSSLFFSFLFIKLVNLHDTTTDPEIRAREVYFLLDEFPNIGE 419 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 +PD E + R QS QLE IY ++ +T+ F + K AE+ Sbjct: 420 IPDFQEKIATIRSRRLHCSIIFQSLGQLEKIYPLD-WENIIGCCDTKFFLGANDLKTAEY 478 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 + +G K S G + + + + + ++ L++ ++ + V + G Sbjct: 479 VSELLGTKSIHTRSVSRQGGLEGLTEIERITQSVGKRQLLTQDEVLRFENEKAIVMVRGH 538 Query: 553 YPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVS 612 P + + + I AA + + ++ Sbjct: 539 KPLIVEKVDISELKESKQLTI------RAIKDYLRPWAAEVTGNTTAGQVCDAGAQSQIN 592 Query: 613 GEDVTQAEQPQQPVSPAINDKKSDSGVNVPA 643 + + ++ Sbjct: 593 ADQSQNRFTTPPENNADGSEGNEQKETGEDE 623 >UniRef50_C1F5K1 Conserved domain protein n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5K1_ACIC5 Length = 666 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 129/519 (24%), Positives = 221/519 (42%), Gaps = 20/519 (3%) Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLP 178 A + ++ F V+ + RQ + + G +LT + A G +D + Sbjct: 161 AGLFLILLPFAVTLDVKRQKALKYGRRLKGPERLTPQAFNRAVKGDGIGFKTDDMKEMIR 220 Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI-DKI 237 I +E Q+ + G GAGKS ++ ++ R R D ++YD + EFVK +YDPS D I Sbjct: 221 IPAKAEAQHMQIIGDTGAGKSAMLFQVLRQVRGREDSAIVYDPAREFVKRFYDPSRGDVI 280 Query: 238 LNPLDARCAAWDLWKECLTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMRND 296 LNP D RC W L +E ++ + A +L P ++ F+ S + IFA Sbjct: 281 LNPFDKRCPYWGLAEELRSRSEAKALAASLFQPPQDRKGEFFIESPQKIFAFLMAY---- 336 Query: 297 PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQG 356 + +LV + + ++ L+ + A+L++ + + + L ++R L Sbjct: 337 -GPTPDELVQWMSNPD--EIDRRLKGTEHAHLIDPRAHQQRAGVLGSLALVADSLRLLPK 393 Query: 357 IEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 +T +W ++ GW+FI+S +L+P+ S+W+ + LL Sbjct: 394 KGEGNGRWTATEWAE-----KRQGWIFITSLPAEREALRPLQSLWIDWLVLRLLNEPTKE 448 Query: 417 NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 +RVWF DEL +L KLP L + E+RK V G Q AQLE +YG A + Sbjct: 449 QKRVWFVIDELASLQKLPQLHTAITESRKSRNPVVLGFQGKAQLEYLYGH-LAEVMLSQP 507 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 T + + E+ + IG+ E + E + D R G + + + + LV S+ Sbjct: 508 ATSVWLTTKEPNAGEWVSKFIGKVEIERLRETH---FDGTRSGHNFTIERQVEPLVLESE 564 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 I LPDL ++ S Y P+VA F R+ + L + Sbjct: 565 ISGLPDLHAFMKYQNY--VTYFSFPYFDMPEVAKPFELRERTDDKLPYDPTALREGRPQA 622 Query: 597 RQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKS 635 P + ++A QP+ +PA ++++ Sbjct: 623 ELKQEPEAPVPAPEPNEPVASEAIQPELSAAPADQEEQN 661 >UniRef50_C6BT46 TRAG family protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BT46_DESAD Length = 648 Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 88/612 (14%), Positives = 182/612 (29%), Gaps = 98/612 (16%) Query: 91 NAAQVLHDKYMIWCS------EQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN 144 A + + +MI+ + + +++ V I + + + K + Sbjct: 53 TAYEQFYWPWMIFNWVKIVQPSEYLDRIISTSLIIFVAPQILVLGLVALFSGKPKGVDD- 111 Query: 145 EVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD------LPIIRDSEIQNFCLHGTVGAGK 198 G K++ + +G S + +G L +R + ++ +GK Sbjct: 112 --IHGTAHWAEKKEIKKAGLLEG--SGVYVGGWQDKKVLRYLRHNGPEHIMAFAPTRSGK 167 Query: 199 SEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKI--LNPLD--ARCAAWDLW 251 + + ++ D GE + K+ +P D A ++ Sbjct: 168 GVGL--VLPTLLSWEGSTIVLDIKGENWALTSGWRKAQGHKVMKFDPTDTTGSSARYNPL 225 Query: 252 KECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAY-------------- 291 E PD N A+ ++ P G +W + + Sbjct: 226 SEIRLGGPHAIPDAQNIASMIVDPDGKGLRDYWNKAAFSFLGGTILHCLIYFRINAGTHA 285 Query: 292 ------LMRNDPNRSYSKLVDTLLSIK-IEKLRTYLRN--------------SPAANLVE 330 LM D NR S+L + +L+ + +L + AA + Sbjct: 286 TLNDLSLMLADENREMSELFEEMLNEDHVAQLEELFGEEMDHDSKVAIRKFIAAAAREML 345 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNAD 389 K + + + + R +G F I D M ++ L++ Sbjct: 346 NKADAELSGVVSTAVANMALYRDPVVSRSTSGCDFRITDLM----NSEQPVSLYLVIRPS 401 Query: 390 THASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLVEILP 441 L+P++ + L+I +R L E R+ DE +L K+ L Sbjct: 402 DIDRLRPLVRLILNIVLRRLTEEMEFSNGAVKAGYKHRLLLMLDEFTSLGKMEIFERALA 461 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 +G +Q QL+ YG++ S+ + R + + A+ + GE Sbjct: 462 FMAGYGIKAYIIVQDLTQLQSAYGKE--ESIMSNCHLRMAYAPNKIETAQVLSKMTGEAT 519 Query: 502 HLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP------------DLTCYVTL 549 ++ S + ++ L++ + LP + Sbjct: 520 VVQRKTSISGTRAGRLSRANVSVSEAKRALLTPDECMRLPGAEKDHNGMITKSGDMLIFP 579 Query: 550 PGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPE 609 G P + + PK F+ R P + E ++ E Sbjct: 580 AGFAPIYGKQILFFLDPK----FLERSKIPAPDKSDKLNEQIEETPAPNEPAIDLDAEME 635 Query: 610 VVSGEDVTQAEQ 621 + V + E+ Sbjct: 636 ELEEGTVYEDEE 647 >UniRef50_Q0KKK9 VirD4 type IV secration protein n=1 Tax=Plasmid pLB1 RepID=Q0KKK9_9ZZZZ Length = 638 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 82/575 (14%), Positives = 178/575 (30%), Gaps = 53/575 (9%) Query: 99 KYMIWCSEQLWSAFVLAAVVALVICLITFFVVSW---ILGRQGKQQSENEVTGGRQLTDN 155 + + A AV+ + + ++ +V L + + E E+ Sbjct: 52 FWYYRHDPVVTEALWRGAVIGVPLPVLLMAIVLRPKKNLHGEARFAREGEIRKAGLRAKK 111 Query: 156 PKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM 215 + R+ ++ + +G + + L G+GK I + Q D Sbjct: 112 GIVLGRVRNGFFRNGFLMVGKME--------HVLLEAPTGSGKGVGI--VIPNLLQWPDS 161 Query: 216 VVIYDRSGE---FVKSYYDPS--IDKILNPLDA--RCAAWDLWKECLTQP------DFDN 262 VV+ D E + + NP D R A ++ + Sbjct: 162 VVVLDIKRENYEITAGFRRKGGQKVVLFNPTDREGRTARYNPLSYINRADPIEVLVELQK 221 Query: 263 TANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYS--KLVDTLLSIKIEKLRTYL 320 A L K + FW S RT F A + R +S ++ T+ ++ + Sbjct: 222 IATMLFVPPEKGEAFWTESARTAFVGIASWIAAKSERPFSFGEIYRTITMPG---MKAFF 278 Query: 321 RNSPAANLVEEK-----------IEKTAISIRAVLTNYVK-AIRYLQGIEHNGEPFTIRD 368 + + E + T I +T+ + I + F++ D Sbjct: 279 AKEAGDSALSEGCRAALSDFTSSADNTFTGIIQTVTSKLNLWINPIVDRATAESDFSLTD 338 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR--VWFFCDE 426 R +++ + D + P+ +++ I + + + V DE Sbjct: 339 LRRI------PTSIYLGVSPDELDRVAPLYNLFFQQLIDLNTRQLPDESEKLSVLLILDE 392 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPS 486 L + + R +G + IQS +QL ++YGE A + F Sbjct: 393 FARLGRAQVIANAFSYVRGYGLRLLPVIQSRSQLRNVYGEHGADEIVSNCGVEIAFTPKE 452 Query: 487 HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCY 546 ++A+ + +G + +E S + S +R+ L+ ++ LP+ Sbjct: 453 LRVAKELSERLGY--LGQDAESRSLTIHGLLANRSKTISEQRRALMLPQELMQLPEDDIL 510 Query: 547 VTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPD 606 V G ++Y P + ++ ++ + ++A+ + Sbjct: 511 VIRGGIPVIRGKKIRYFKDSVFRSRLTTAPAVPALPKPVAPIVPVDDLSDEELAAFNDYS 570 Query: 607 VPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNV 641 +D+ + P + K + Sbjct: 571 ALADDQVQDIPEDVLALDRDMPNLTVKDGSMAFDE 605 >UniRef50_C9RCI6 TRAG family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RCI6_AMMDK Length = 673 Score = 292 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 88/532 (16%), Positives = 162/532 (30%), Gaps = 55/532 (10%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG----GRQLTDNPKDVARM 162 L + V + L +CL + W G+ V G +P + Sbjct: 91 DLTAPAVFRVWLVLSLCLAVGAALVWYRLMYGEALVGEAVGRSTPGGTARWSSPFALREY 150 Query: 163 LKKDGKDSDIRIGDLPIIRDSE----------IQNFCLHGTVGAGKSEV-IRRLANYARQ 211 +G +P+ +N + G G KS IR A Sbjct: 151 FGFSWSTPGYVLGGVPVGIGVRPVVLKEDAPGNRNVAVFGPPGRMKSVGPIRCNLFQAAV 210 Query: 212 RGDMVVIYDRSGEFVKSYYD-----PSIDKILNPLD-ARCAAWDLWKECLTQPDFD---- 261 G VV+ D GE V+ + + K+ N + W+ E + D Sbjct: 211 SGTSVVVTDPKGELVRDFRRFFEKNGYVVKVFNLVSMLNSDRWNPLSEVKSGLDAQLFTS 270 Query: 262 -NTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIKIEKLR 317 ANT +P DPFW + + + ++ R+ L L S + L Sbjct: 271 VVIANTQVPGRKGGDPFWDRAEMNLLKALVLYVVSEVPRAQRNLGTLYRVLASGDSKALD 330 Query: 318 TYLRNSPAAN-------LVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM 370 + P + L E + L ++ + + D Sbjct: 331 RTFQALPPDHPAKLPYNLFLETSGTVRSGVIIGLGTRLEVFQDRLV----CALTSASDID 386 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCD 425 + ++ + + DT ++ + S++ S L + + + V F D Sbjct: 387 LELPGKERCAYFCVL--PDTDSAFNFLASLFYSFLFIKLTRLADRQPGGRLPVPVHFLLD 444 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E + ++P+ + + R G Q+ QL ++YG+ + + Sbjct: 445 EFCNIPQIPEFEKKISTMRGRGIGVTVVFQNIPQLMNLYGQGLWEIILGDCDYWLVLGGV 504 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRD--GVSTGKDMERQTLVSYSDIQSLPDL 543 A + + +G K +EQ G D + +ER L++ S++ L Sbjct: 505 ERSTAAYVSDILGHTSVKKVTEQRPKGIMKWLDPWEGRETEGVERAPLMNLSEVTRLGLD 564 Query: 544 TCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAE 595 C V + L Y P + R++ P A E Sbjct: 565 ECLVRVADGRVVKLRKLPYWRHP------LYRELEPAHVLEYRPAWAESWRE 610 >UniRef50_A5N4W3 Plasmid transfer factor-related protein n=133 Tax=Bacteria RepID=A5N4W3_CLOK5 Length = 610 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 95/622 (15%), Positives = 197/622 (31%), Gaps = 72/622 (11%) Query: 67 EGMRDLIKSQPVYEIQYY----GKTFRMNAAQVLHDKYMIW------CSEQLWSAFVLAA 116 + R +I + P + ++ G +R+ A +K + FVL+ Sbjct: 4 KIRRYVIPNVPYLLVLWFCLKLGTAYRLAAGADFGNKLVGMIKTISPAFASFAPGFVLSD 63 Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD 176 + + + +V W + K+ + V G KD+ + ++ I G Sbjct: 64 WLIGLAGAVILRLVVWYKVKNAKKFRRD-VEYGSARWGTAKDIKPFIDPKFSNNVILTGT 122 Query: 177 LPI--------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS 228 + ++ N C+ G+ G+GK+ L Q V+ D G ++ Sbjct: 123 ELLTMNTRPANPANARNLNCCIIGSSGSGKTRF--WLTPQLLQAHSSYVVVDPKGGILEQ 180 Query: 229 -----YYDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTANTLIPMGTK----EDPFW 278 K+ N +D AR ++ T+ D N LI DPFW Sbjct: 181 VGSFLKKQGYKIKVFNSIDFARSMHYNPLAYLKTESDILKFVNALIENTKGDGKEGDPFW 240 Query: 279 QGSGRTIFAEAAYLMRNDP---NRSYSKLVDTLLSIKIEKLRTYLRNSPAANL------- 328 + ++ + + R + LVD L S++ + +N+ Sbjct: 241 TKAETLLYCALIGYIVLEGPEEERHINTLVDMLNSMETREDDENFKNAVDYMFLGLEKRN 300 Query: 329 -----------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQ 377 + KT+ SI + I E + + D+ Sbjct: 301 PNHFAVRQYKKFKLASGKTSKSILISCGARLAPF----DIGQLREIMSYDEMELDRMGDK 356 Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR-----NRRVWFFCDELPTLHK 432 K FI S DT+ + ++++ S L +++ V DE + Sbjct: 357 KTATFFIIS--DTNTTYNFIVALAFSQMFNLLCERADSKYGGRLPHHVRVLWDEAANTGQ 414 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 +P L +++ R +Q+ +QL+ +Y + A ++ M++ F H + Sbjct: 415 VPQLEKLVAVIRSREISLCLFLQAQSQLKALY-KDHAETIMGNMDSVIFLGGREHSTIKE 473 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 + +G++ +E + G + L++ ++ ++P C + L G Sbjct: 474 LSEVLGKETISMQTESRTRGQSE---SYGQNLQRLGKELMTMDELTTMPGNKCILQLRGL 530 Query: 553 YPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVS 612 +P + + P + N A + + Sbjct: 531 HPFLSPKYDLKQHPNYR-----YTAEADKRNAFDASKLVNRRMKKLNPNEQYTVYEVNAD 585 Query: 613 GEDVTQAEQPQQPVSPAINDKK 634 E E ++D + Sbjct: 586 EETAAIDENEDILNYDDVDDPE 607 >UniRef50_Q1JB76 TraG/TraD family n=13 Tax=Bacteria RepID=Q1JB76_STRPB Length = 597 Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats. Identities = 74/547 (13%), Positives = 170/547 (31%), Gaps = 53/547 (9%) Query: 64 TTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC 123 + + P+ + + + I + +V +++ Sbjct: 7 QKTSLILAVCGILPIVWFALLTVPYVDGGLVEIIENLPIAMNNPFHITVCEDSVKTVLLF 66 Query: 124 LITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRD- 182 L+ + + I K E G + + + K+ + + ++ I D Sbjct: 67 LLAYGMGIGIYLSTRKNYRRREEHGSAKWGNASAINKKYQDKNPSANKLLTQNVRIGLDG 126 Query: 183 ---SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY-----YDPSI 234 N G GAGK+ + A Q +V+ D GE V+ Sbjct: 127 KKHRRNLNILCCGGSGAGKTRFFCK--PNAMQCNTSMVVLDPKGEIVRDVGGLLEKKGYE 184 Query: 235 DKILNPLDA-RCAAWDLWKECLTQPDFDNTANTLIP-----MGTKEDPFWQGSGRTIFAE 288 ++L+ ++ + ++ + D L +DPFW + + Sbjct: 185 VRVLDLINMHKSHCYNPFVYLKNDNDVQRLVTNLFKATTPKGSQSQDPFWDTAASMLLLS 244 Query: 289 AAYLMRND---PNRSYSKLVDTLLSIKIEK--------LRTYLRNSPAANL--------- 328 + ++ + +++ +++ L + ++ + L N Sbjct: 245 LVFYLKYEAPRDEQNFPMVMELLRAGEVHEDDDSYISPLDELFDRLEMENPDHIAVKYYK 304 Query: 329 -VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 KT SI+ L ++ T D + +K LF Sbjct: 305 DYHSGSAKTLKSIQITLAARLEKFNLESVAA-----LTATDELDLPSLGEKKVALFALI- 358 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENR-----NRRVWFFCDELPTLHKLPDLVEILPE 442 D S ++S+ + + L + +++ F DE + D +IL Sbjct: 359 PDNDTSFNFLVSILYTQIFQQLFYLADHKYGGSLPVHCHFIMDEFANVSLPDDFDKILSV 418 Query: 443 ARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 R G +Q+ AQL+ ++ EK S+ + + ++ + +G++ Sbjct: 419 MRSRGVSVSIILQNLAQLKALF-EKQWESICGNCDEFLYLGGNEQSTHKYVSELLGKETI 477 Query: 503 LKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 + S G ST + + L++ +++ L + + + G P + L Sbjct: 478 DTNTYGKSSGRSG---NYSTNYQISGRELLTPDEVRMLDNRYALLFIRGERPVMDLKYDI 534 Query: 563 QTRPKVA 569 P + Sbjct: 535 LKHPNLK 541 >UniRef50_Q209N2 Conjugal transfer protein VirD4 n=2 Tax=Aeromonas RepID=Q209N2_AERHY Length = 641 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 95/647 (14%), Positives = 203/647 (31%), Gaps = 78/647 (12%) Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + L + + + ++ + Y ++ + AA +L Sbjct: 16 LFGVPLFILAWVWLAGAIFMAGNGLNAKEATPLTLYQYWYYYGDIKKTQAWITGAAFGSL 75 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA--RMLKKDGKDSDIRIGDLP 178 +I L+ F+ + E G K++ + +DG ++ Sbjct: 76 LILLLPVFLYF---------MPKKESLFGDARWATEKEIKDSGLYSEDGIIVGVKTAFFG 126 Query: 179 IIRDSE----IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYD 231 +I+ Q+ + +GK I + D VV+ D E + Sbjct: 127 LIKKYLIFGGAQHVLMAAPTRSGKGVSI--VIPNLLSWKDSVVVLDIKQENWDITSGFRA 184 Query: 232 PSID--KILN--PLDARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSG 282 +LN P D R W+ P D L P E P WQ S Sbjct: 185 KHGQECYLLNLAPRDYRSHRWNPLFYISDDPNFRINDIQKIGQMLFPKVENEAPIWQSSA 244 Query: 283 RTIFAEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLR-NSPAANLVEEK------- 332 R+++ + + + + L E+L + + N + ++ Sbjct: 245 RSLWLGLVLYLIETEELPVTMGEALRQLTMGD-ERLAEIVEQRQESDNPLSDECYLALKE 303 Query: 333 ----IEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 +KT S+R T ++ + +G F +RD ++ +++ Sbjct: 304 YLDTPDKTRGSVRKGFTASLELFYNPVIDAATSGNDFDLRDL------RKRRMSVYVGIT 357 Query: 388 ADTHASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEA 443 D L P+I+++ I R L + DE + K+ L + + Sbjct: 358 PDDLDRLAPLINLFFQQVIDLNTRELPEQNPDLKHSCLLLMDEFTAMGKVGILSKGISYI 417 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 +G + IQS AQL + YG AA + D + F + K+A+ + +G K Sbjct: 418 AGYGLRMLPIIQSPAQLRETYGADAAETFIDNHALQIVFAPKNIKVAKEISDSLGTKTVK 477 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 S + S + L+ +++ + + L P + + Sbjct: 478 NKSRSRQL---TGKTSRSENASDTGRALLMPQEVKQIGQKAEILLLENCPPIKCSKITWY 534 Query: 564 ---------------TRPKVAPEFIPRDINPE-----MENRLSAVLAAREAEGRQMASLF 603 P A + + P+ N++ + + + ++ Sbjct: 535 ADQTFNERGNGRDGVKFPSPAVPLVDPNNRPKGEVSFHSNKIEDAETSEKTVVERDITVA 594 Query: 604 EPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL 650 + + + ++ +D + + +I+D D V+ G+ + Sbjct: 595 DIENIDNLNLDDFSCDFSKIEIPEGSISDDAMDDLVSQFFNGLAEAA 641 >UniRef50_B6ASB1 Conjugal transfer protein, TraB n=2 Tax=Leptospirillum RepID=B6ASB1_9BACT Length = 701 Score = 289 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 138/695 (19%), Positives = 271/695 (38%), Gaps = 59/695 (8%) Query: 38 WILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLH 97 +L G V+++ +S +++ T L VY + G + A+ L Sbjct: 18 LLLAGAVMFVLVSLGSWIAWMKLTRGITPGLSVPLWIEVTVYLLPP-GHVVSLGPAKSLA 76 Query: 98 --DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 D + W V+ ++F +V R K G QL + Sbjct: 77 EMDPGLAHSLLTTWK----------VLSAVSFVLVGIAAMRLAKGPQPVRHKRGDQLRSD 126 Query: 156 PKDVARMLKKD-GKDSDIRIG-DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRG 213 + + ++ G I + + I E+++F L G+ G+GK+ V+ + ++A RG Sbjct: 127 AGTIRKQIRARYGVTDGIFVHPGIRIPETLEVRSFSLVGSPGSGKTTVLNGMVDHAIARG 186 Query: 214 DMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 D +I+D G+F + + IL+P DAR L + ++ + LIP+ + Sbjct: 187 DRALIFDFKGDFTERIPN-GKKIILSPWDARAVRLALGSDVSSEVQARLLSECLIPINPR 245 Query: 274 E-DPFWQGSGRTIFAEAAYLMRNDPNRSY-------SKLVDTLLSIKIEKLRTYLR--NS 323 + P W + R I + + + ++ + L D L + ++ ++ N Sbjct: 246 DTQPMWGNASRAILRAELHRLMAERQGAWGFHELGDALLADILCPYSDQVVQNLVKRYNP 305 Query: 324 PAANLVEEKIEKTAISI----RAVLTNYVKAIRYLQGIEHNGEPF-TIRDWMRGVREDQK 378 A+ +V++ KT +S+ A L + + R+ ++ G PF ++R ++ G +++ Sbjct: 306 EASRIVQDLTSKTTLSVLIDQSAALGDTILLSRFDLELKKGGRPFLSLRSYLSGETREKR 365 Query: 379 NGW-LFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN--RRVWFFCDELPTLHKLPD 435 N + + + D+ +S +++ + + + RR+WFF DE+P ++P Sbjct: 366 NPLPVILPVHPDSKTLTSAFVSAVFTLSSSIVTNFPDAKPNARRIWFFLDEVPQAGRIPP 425 Query: 436 LVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAG 495 + + L AR G V G Q+ AQ+ + YGEK + + + F + S + ++ + Sbjct: 426 ITDFLVTARSKGCRTVLGFQTPAQVAETYGEKTLEIWDNATSVKVFLQCVSPEAKKYVSQ 485 Query: 496 EIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL----PDL-TCYVTLP 550 IGE+E L + + G P G +T ER+ LVS + SL + T V + Sbjct: 486 SIGEREILAFKKSDNIGIAPTHTGHTTNWVDEREKLVSPDEAASLLGPGKNGVTGIVQIA 545 Query: 551 GPYPAVKLSLKYQTRPKVAPE----------FIPRDINPEMENRLSAVLAAREAEGRQMA 600 G P L+ ++ PK A + D E+ + + Sbjct: 546 GCDP-ALLTWPFRNYPKAAEARQLVALPLRGTLAPDSPEGEESERERIPENEVYQPETRQ 604 Query: 601 SLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQ 660 + EP + V + P + D +S V AG E Sbjct: 605 NTKEPGQMKGPEPASVRITPLSKPPEASGEKDGGEESPVGEIAGE---------ALEHMA 655 Query: 661 QLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQR 695 L P ++ + ++ A+ + Q ++ Sbjct: 656 GLDPTVTVLKILAELTAHAPPAAGIRAEGQTAAKK 690 >UniRef50_A5VH50 TRAG family protein n=2 Tax=Alphaproteobacteria RepID=A5VH50_SPHWW Length = 670 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 84/573 (14%), Positives = 164/573 (28%), Gaps = 61/573 (10%) Query: 99 KYMIWCSEQLWSAFVLAAVV--------ALVICLITFFVVSWILGRQGKQQSENEVTGGR 150 M + W + + AL+ I F ++ IL R E Sbjct: 44 PRMQISAIPAWLWYYRGDPLLHLWLKRGALISGAIAFVILLIILKRGRTLHGEARFARES 103 Query: 151 QLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR 210 ++ + K + ++ L AGK + + Sbjct: 104 EIRREHLRSNSGIIVGQKGGRYLVFG-------GTEHVLLEAPTRAGKGVGV--VIPNLL 154 Query: 211 QRGDMVVIYDRSGE---FVKSYYDPSI--DKILNPLDA--RCAAWDLWKECLTQPD---- 259 D VV+ D E + + +PLD R A ++ D Sbjct: 155 SWADSVVVLDVKRENWDITAGFRARHGQAVYLFDPLDPEGRSARYNPLSFIDRLDDTDVI 214 Query: 260 --FDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLSIKIE- 314 L P K DPFW + R F L+ +P + ++ L + + Sbjct: 215 NELQKIGGMLFPAPEKADPFWAEAARAAFVGVGALVAANPALPFTIGEIYRRLTAGDPKV 274 Query: 315 KLRTYLRNSPAANL------------VEEKIEKTAISIRAVLTNYVK-AIRYLQGIEHNG 361 +L + + + T I+ +T+ + + + Sbjct: 275 ELPKVVEEAQQRGQRLSQACVSALSDFTSASDNTFSGIKQTITSKLNLWLNPYVDAATSE 334 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR--NRR 419 F +R ++ +++ + D + PV +++L I Sbjct: 335 TDFDLRQ------VRRERISIYLGVSPDNIDRIAPVYNLFLQQLIDLNTRELPENGGRVP 388 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 V DE L K P + +G + IQS +Q IYG + Sbjct: 389 VLILLDEFARLGKAPVIASAFSYVAGYGLRLLPVIQSRSQPRGIYGVDVTDEIIANCGLE 448 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 F K+A + +G S+ + + S + +R+ L+ ++ Sbjct: 449 IVFTPKELKVASELSERLGYFTMNVKSKSRTI--HGLLANRSISESDQRRALMMPQELMQ 506 Query: 540 LPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQM 599 +P + G P ++Y + P++ R A+ A A Sbjct: 507 MPKGELLLMRGGIPPVRGRKIEYFRSKRFTSRI---SDPPKVAPRPIAINAMSSATKLAG 563 Query: 600 ASLFEPDVPEVVSGEDVT--QAEQPQQPVSPAI 630 + + + +S + +Q P A Sbjct: 564 EASSSDPLAQALSAKKAALLSDDQATAPTERAE 596 >UniRef50_A5EUP0 Putative type IV secretory pathway protein VirD4 n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EUP0_BRASB Length = 648 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 83/517 (16%), Positives = 155/517 (29%), Gaps = 47/517 (9%) Query: 147 TGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLA 206 G + +++ + + + D ++ ++ ++ AGK + Sbjct: 94 LHGSARFASEREIKAAGLRSKQGVLLGRKDGALLCFGGSEHVLVYAPTRAGKGVG--YVI 151 Query: 207 NYARQRGDMVVIYDRSGEFV---KSYYDPSI--DKILNPLDAR--CAAWDLWKECLTQP- 258 D VV+ D E + + +PL+ A ++ + P Sbjct: 152 PNLLNWPDSVVVLDVKKENWDRSAGFRAAHGQEVYLFDPLEEHGCTARYNPLGYVRSDPA 211 Query: 259 ----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR--SYSKLVDTLLSIK 312 D A L P T+ DPFW + R+ F + P + +++ L + Sbjct: 212 DLYDDLQRIAVMLFPAETRGDPFWFEAARSAFVAIGGYVAETPGLSLTIGEILHQLSAAP 271 Query: 313 IEKLRTYLRNSPAANLVEE----------------KIEKTAISIRAVLTNYVK-AIRYLQ 355 L+ + AA E T S+R +T + + Sbjct: 272 --DLKAHFEKIIAARKFGSSPLSRHCIAALNDFLAASENTMNSVRKTVTARLGLWLNPRI 329 Query: 356 GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLA 411 F +R QK +++ D + P+++++ + R L Sbjct: 330 DAATTTNDFDLR------HLRQKPMSIYLGVTPDNLDRMAPLLNLFFQQVVDLNTRELPE 383 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 NR+V DE P L + L + +G + IQS AQL IYG A + Sbjct: 384 QNPKLNRKVLLLLDEFPALGNVNVLARSVAFIAGYGIRLLTVIQSPAQLRGIYGIDTARN 443 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 F +A + IG S G S R+ L Sbjct: 444 FMTNHAVEVVFAPKEQDVANELSERIGYDTVKARSRSGPKGLAMR--STSETISEHRRAL 501 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 + +++ LP ++ G P + + Y +P R +A+L A Sbjct: 502 MLPQELKLLPKTKAFILGTGIPPIIADKIVYYEDKAFLRRLLPAPTPEMPNGRSNALLDA 561 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 E R + ++ + Sbjct: 562 EIKELRSAVAELRAAFRSRPMTDEEVADPSTIPADAS 598 >UniRef50_B5UW87 Protein TrsK n=1 Tax=Bacillus cereus AH1134 RepID=B5UW87_BACCE Length = 842 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 98/708 (13%), Positives = 228/708 (32%), Gaps = 68/708 (9%) Query: 63 CTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVV---A 119 TL + ++ + + + + ++ + + M +A + V Sbjct: 12 AITLSLLVTIVVEWLLATVFVWMPKAKEISSFDVVWEDMQDPIPLFQNALEVEPFVKMQL 71 Query: 120 LVICLITFFVVSWILGRQGKQQSENEVTGGRQ----------LTDNPKDVARMLKKDGKD 169 V + +FVV + GK ++ + G + + DN V + K Sbjct: 72 AVAFIFIYFVVRFYKVLNGKGTYKDASSYGSEGTVRESKTTEVFDNVNFVKKTFNKKNSF 131 Query: 170 SDI---------RIGDLPIIR----DSEIQNFCLHGTVGAGKSEVIRRLANYAR-QRGDM 215 ++ + + P+I D +N + G+ G+GK++ + +R Sbjct: 132 KNLENHEGLIFGLLDNKPVILHEKTDIPNRNVFVVGSPGSGKTQS--YILTNIIFERNRS 189 Query: 216 VVIYDRSGEFVK-----SYYDPSIDKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLIP 269 +V+ D GE + +++N + ++ + + + A T++ Sbjct: 190 IVVTDPKGEIYESTAKYKMQQGYEARLINFKEMTISDRYNPIDYINKEIEAEQVATTIVY 249 Query: 270 MG--TKEDPFWQGSGRTIFAEAAYLM-RNDPNRSYSKLVDTLLSIK---IEKLRTYLRNS 323 ++ FW + + + PN ++ V +L+ E + + + Sbjct: 250 SSLQGQKPDFWTKAEVALLKTLLLYVKYECPNEAHLYKVKQVLTEHGRTPELMDEFFSHL 309 Query: 324 PAAN-------LVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRED 376 + +V +K SI L + + FT Sbjct: 310 EPEHPAYSAYTIVRMAEDKVRASIFVSLAITLSKFD-----PKDVRRFTETSDFLLDDIG 364 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR----VWFFCDELPTLHK 432 +K +++ ++ +P+ + + + + L + + + V DE P L K Sbjct: 365 KKKMVVYVVLPVAD-STWEPLTANFFTQMFQRLYDVADRNFNKLPVFVNLLLDEFPNLGK 423 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 + E L R +G IQS QL D Y ++ A ++ + R A + Sbjct: 424 IEGYEETLATCRSYGISCSTIIQSIGQLIDKYNKEKAEAIIGNCSLRILLGVGDKLTANY 483 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 + IG+ S D S + ++L + ++ LP + + G Sbjct: 484 FSELIGKTTIEIQQTSVSKNERGGSDSKSNNY--KGRSLFTPDELTRLPRNEAILLVSGR 541 Query: 553 YPAVKLSLKYQTRPK-------VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP 605 YP T K F + E N + +A ++ + Sbjct: 542 YPIRLKKAYQFTFFKGILNEDNKTSRFDYLKLKAEFANNDATEVAEELVLTKKEHVPEKK 601 Query: 606 DVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPG 665 ++ + + + N+ ++ N+ A L + + + P Sbjct: 602 EIIIEKETMTIEEMMMEEVQEKSHENEIGPENEQNLTAAIFFSGLDEIDKNLNQLENPVN 661 Query: 666 ISE-SGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGEDVE 712 + E ++ + E + E+ + + + +EV + G++ E Sbjct: 662 EIDLEMEYLNNSYAELQKNESELVLDEGPEVEQEVTTEIDLPMGDESE 709 >UniRef50_A1VQA5 TRAG family protein n=2 Tax=Burkholderiales RepID=A1VQA5_POLNA Length = 661 Score = 287 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 91/634 (14%), Positives = 174/634 (27%), Gaps = 116/634 (18%) Query: 33 LFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNA 92 F+ F ++ L + + G + Q + Sbjct: 26 AFLIFGLVTALTFVL-----VTQYTAWQFRFHPTLGSPAAMLGQTRIYWPWDV------L 74 Query: 93 AQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQL 152 + + L ++A F V+++ R K + E G Sbjct: 75 IWIFRYFRPDSSPDVLSVIKTAQLMLASGAMTSIVFPVAYVFRRTRKLKDERNDLHGSAH 134 Query: 153 TDNPKDVAR--MLKKDGKDSDIRIGDLPII------------------RDSEIQNFCLHG 192 +++ +L + +G + I R S ++ + Sbjct: 135 WAVAEEIEAAGILPTPANVGGVMLGAVDIPVKNSGFNPFSAKAKTVYLRHSGPEHILVFA 194 Query: 193 TVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYD---PSIDKILNPLDARCA 246 +GK I + + V+++D GE + + +P + A Sbjct: 195 PTRSGKGVGI--VVPTLLSWSESVLVHDIKGENWALTSGFRERVLKQRCLRFSPSETDSA 252 Query: 247 AWDLWKECLTQ----PDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMR-----ND 296 ++ E D N + ++ P G W +G + + D Sbjct: 253 RFNPLSEIRLDDNLVKDVQNVSTMIVDPDGKGLQDHWAKTGFDLMTGVIIFVLVSDELED 312 Query: 297 PNRSYSKLVDTLLSI-KIEKLRTYLRN--------------------------------- 322 R+ S + L + +L L Sbjct: 313 SQRNLSTVQAILSDGGPVRELAERLAADKDTDADEKTKIAEGFRAVMEYIRDIGYERIGA 372 Query: 323 --------------SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIR 367 S AA K A + + +++ R + FTI Sbjct: 373 GHCTDVELVAWKTASQAAQSFLNKASNEASGVLSTALSFLSLYRDPIVAANTSASDFTIE 432 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE---------NRNR 418 M Q+ L++ LKP++ + ++ +R L E Sbjct: 433 SLM------QRRTSLYLVVPPSDKDRLKPLLRLVINQVVRRLTEKMEFDETGASRSRFPH 486 Query: 419 RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNT 478 ++ DE P L KL E L +G + Q +QL Y S+ + Sbjct: 487 KMLLLIDEFPALGKLEIFEEALAFIAGYGLKALLITQDLSQLTKAYSRD--ESILSNCHI 544 Query: 479 RAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDI 537 R F + AE + G +S V + VST + + ++ L++ + Sbjct: 545 RIAFAPNKIETAELLSKMSGASTVAHTQRNFSGSRLSVVLNNVSTNEQLSQRPLLTPDET 604 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 LP V + G P + Y T P + Sbjct: 605 MRLPPADELVFVAGHAPIYCQKIIYYTDPALVKR 638 >UniRef50_A9ATZ0 Type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ATZ0_BURM1 Length = 675 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 121/587 (20%), Positives = 226/587 (38%), Gaps = 30/587 (5%) Query: 14 IASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLI 73 + M + + L +W+ + + ++ + +RD + Sbjct: 22 LTVHAASMAFFVGALPAMVLPSVWWMNTLTAHDVDLVKANILSHVVDQEVPRRWRIRDGV 81 Query: 74 KSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWS---AFVLAAVVALVICLITFFVV 130 + + + AQ L L AF A V++ + ++ V Sbjct: 82 GEKKILTVVKSDGEL----AQWLTPPQFRNVVPDLARPVTAFRYVAWVSVGLGAAGYYAV 137 Query: 131 SWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCL 190 L R G++ EN+ G + +++++ ++++ + + D+ + R + +Q Sbjct: 138 WRSLARLGRRARENKRVDGALDVVSAEELSKAVRRE-EAGPYTVLDVALPRSAPMQGIMF 196 Query: 191 HGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDL 250 G G GKS I L RG VIYD +GE+ ++YY P D NP W + Sbjct: 197 VGAQGTGKSLGIHDLMGQVFARGRKSVIYDHAGEYFRAYYRPGKDLFFNPALLGSVPWSM 256 Query: 251 WKECLTQPDFDNTANTLIPMGT----KEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVD 306 + E D D A+ +P F++ + R +F+ A +R + + Sbjct: 257 FMEMENTYDSDTLAHAFLPPKAGVVHGASAFFEDAARVLFSVMALRLRQRGAVYTRLISE 316 Query: 307 TLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTI 366 +LS+ ++L ++NS A++ V + + + + Y+ I +Q +T+ Sbjct: 317 AILSMPEDELELLIKNSVASSAVGGDSKGQRQGVISSIAIYLNGIAAVQD-----GTWTL 371 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE-NRNRRVWFFCD 425 R++ + + LF+ DT+A P+ + +++A + + A E R WFF D Sbjct: 372 REFYEKDDDTR----LFLIGTEDTYAMFAPLFRLLITMAFQTIAARREIRHEDRYWFFLD 427 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E L + L E RK+G C GIQ+ Q G A +L + NT R Sbjct: 428 ETHVLGDIK-LDARQAELRKYGVCVAAGIQADKQFNTSMGADRAETLMNCFNTTVTLRLN 486 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + E A +G+ E + RDG +D + +V S I L + Sbjct: 487 EPNMQERMARRLGKSETAVVRAGQAIAVTDWRDGGQLSQDEREKWVVMPSKIGLLKNCMA 546 Query: 546 YVTLPGPYPAVKLSLK------YQTRPKVAPEFIPRDINPEMENRLS 586 YV + G +P ++ + Y+ P F R +P + R Sbjct: 547 YVQVAGDFPPALVNYRHWLPRWYRPWP-RTLRFRERQPDPPRDPRFK 592 >UniRef50_UPI0001B44E8D hypothetical protein CdifQCD-6_07437 n=1 Tax=Clostridium difficile QCD-63q42 RepID=UPI0001B44E8D Length = 625 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 85/576 (14%), Positives = 181/576 (31%), Gaps = 68/576 (11%) Query: 104 CSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARML 163 A + ++ + F ++ + + K+ +E G + PKD+ Sbjct: 66 AFSDFSPGLNPADWLIGIVGAVAFRLLIYFKSKNAKKYRRDEEYGSSR-WGCPKDIQPFA 124 Query: 164 KKDGKDSDIRIGDLPI--------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM 215 +++ I G + ++ N C+ G+ G+GK+ L Q Sbjct: 125 DPKFENNVILTGTERLTMNTRPKNPANARNLNACIIGSSGSGKTRF--WLTPQLLQAHSS 182 Query: 216 VVIYDRS-------GEFVKSYYDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTANTL 267 V D G F++ K+ N +D ++ ++ + D N L Sbjct: 183 YVCVDPKSSVLSQVGSFLQG--RGYKIKVFNSIDFSKSMHYNPLAYIKNEADILKFVNAL 240 Query: 268 IPMGTK----EDPFWQGSGRTIFAEAAYLMR---NDPNRSYSKLVDTLLSIKIEKLRT-- 318 I DPFW + ++ + + R+ + LVD + S+++++ Sbjct: 241 ISNTKGEGKEGDPFWTKAETLLYCALLGYIIFEGAEEERNMNTLVDMISSMEVKEDDEDF 300 Query: 319 ------YLRNSPAANL----------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 + + KTA SI + I E Sbjct: 301 LNAVDYMFKGLEQRKPDCFAVKQYKKYKLSSGKTAKSILISCGARLAPF----DIPQLRE 356 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN-----RN 417 + + D++ F S+ D ++ ++++ S L +N Sbjct: 357 IMSYDELELDRMGDRRTATFFCISDTD--STYNFLVALAFSQMFNLLCERADNVHGGRLP 414 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 V DE ++P L +++ R V Q AQ + IY + A ++ M+ Sbjct: 415 HHVRVLWDEAANTGQVPGLEKLVAVIRSREVSLVLLYQQLAQCKAIYDKH-AETILGNMD 473 Query: 478 TRAFFRSPSHKIAEFAAGE-IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 + F + + +G+ ++ + G S + L++ ++ Sbjct: 474 SVIFLGGRESSTIKEISENWLGKATISMQTDGRTRGQSE---SYSQNNQRLGRELMTTAE 530 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 + ++P C + L G P + P R + + + L Sbjct: 531 LATMPGDRCILQLRGLPPFYSKKYDLKQHPNY------RYTAEADKQKNAFDLDKLINRR 584 Query: 597 RQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIND 632 R+ E +V E ++ E ++D Sbjct: 585 RRPGLAEECEVYEATVPDEALMDEDEDILNYDDLDD 620 >UniRef50_UPI0001C35621 ATPase involved in conjugal plasmid transfer n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35621 Length = 642 Score = 284 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 90/594 (15%), Positives = 192/594 (32%), Gaps = 52/594 (8%) Query: 110 SAFVLAAVVALVICLITFFVVSWILG-------RQGKQQSENEVTGGRQLTDNPKDVARM 162 L+ VV ++ T G + R+ Sbjct: 55 HGIKTTVFTILLFFAFAGIVVFQGSISDTSGEDKERNFTYSKLGTYGTAGYMEDAERRRV 114 Query: 163 LKKDGKDSDIR--IGDLPI---------IRDSEIQNFCLHGTVGAGKSEVI-RRLANYAR 210 LK+D + I L + + +N + G+ G+ KS R + Sbjct: 115 LKEDKDIRKVEGIIFGLEMMSGNVLSLPVDSKLNRNIAVCGSQGSMKSRAFARNMILQCV 174 Query: 211 QRGDMVVIYDRSGEFVKSY-----YDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTA 264 +RG+ + I D E + + N +D AWD E D Sbjct: 175 RRGESMFITDPKSELYEDMVAYLKAQRYTVRQWNLIDLENSDAWDCLAEIDEGGLIDIFV 234 Query: 265 NTLI-PMGTKEDPFWQGSGRTIFAEAAYLMR---NDPNRSYSKLVDTLLSIKIEKLRTYL 320 + +I K D F+ + + D +R++++ L++ +E + Sbjct: 235 DVVIRNTTDKFDHFYDNVEMDLLKALCLYVYHEYKDKDRTFAESYKILINQSLEAIDGIF 294 Query: 321 RNSPAANLVEE------KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVR 374 P ++ + K EK + L ++ ++ E + + ++ + Sbjct: 295 DRLPTSHPAKGPYRLFAKAEKVKGNAVLGLGTRLQIMQN----EKVQKITSHKEIDLTLP 350 Query: 375 EDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPT 429 +K + I+S+ D ++ + ++++S L+ + + V F DE P Sbjct: 351 GREKCAYFCITSDQD--STYDVLATLFVSFLCIKLIRYADRQKNRKLPVPVHFILDEFPN 408 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 + +PD + L AR Q+ QL++ Y + + + F Sbjct: 409 IGIVPDFKKKLATARGRNIGMSIIYQNIPQLQNRYPDGQWEEILGGCDMSLFLGCNDMTT 468 Query: 490 AEFAAGEIGEKEHLKASEQYSYGADPVRD---GVSTGKDMERQTLVSYSDIQSLPDLTCY 546 A + + GE +S + + + + S + ++ L+ +I P Sbjct: 469 AMYFSNRSGEVTVSVSSVRKNLNTVRMSNYVPDYSETSSVGKRMLLLPDEILRFPLDQAL 528 Query: 547 VTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPD 606 V + G + Y P + E R L A + + + E + Sbjct: 529 VIIRGQRILRVRKMDYTMHPDAKKLIQEKTDCHVPEWRREEELRAEQDSKVRQEDIGEQE 588 Query: 607 ---VPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEE 657 + SG+D+ + ++ Q+ N+K GI ++++ +E Sbjct: 589 SGFEQGIWSGKDLKKEDESQEVGKSKANEKNIQEEPTERKLGIIEKVEDLFTDE 642 >UniRef50_Q07GJ0 VirD4 protein, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q07GJ0_ROSDO Length = 721 Score = 284 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 83/648 (12%), Positives = 185/648 (28%), Gaps = 47/648 (7%) Query: 95 VLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVS---WILGRQGKQQSENEVTGGRQ 151 + ++ E +A + V LV + + + E ++ Sbjct: 48 LYFAPWITGSIEPFKTAALAGGAVWLVSVIAAVAIGYRPQLASHGSARWAEERDLKKAGL 107 Query: 152 LTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQ 211 + + + K G + R + +EI + + G+GK I + Sbjct: 108 VAPLAEVQGPVFAKFGSPNKRR----AYLTSTEIPHSLIAAPTGSGKGIGI--VIPTLLT 161 Query: 212 RGDMVVIYDRSGEF---VKSYYDPSIDKIL--NPLDA--RCAAWDLWK------ECLTQP 258 VV D GE + D + P D R ++ + Sbjct: 162 YNGSVVCLDVKGENFETTSRHRAAMGDAVFKFAPYDKDGRTHRYNPIDIVTHVADRRRFT 221 Query: 259 DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLS-----IKI 313 + A++LI +K + R IFA + + + + D + Sbjct: 222 EARRLASSLIIAKSKSAEGFLEGAREIFAASVVYAIEQETPTIAAVHDLISQHGQAHSNF 281 Query: 314 EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY---LQGIEHNGEPFTIRDWM 370 E + + A ++ + A + L+ Y+ + + T + Sbjct: 282 ETMAAKAQAPEAVSIF----NRMASTDIRTLSAYLSVLSDGGLSLWADPAVRDATAQSDF 337 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR--VWFFCDELP 428 ++ ++ + L +I + A+ + V F DE Sbjct: 338 TFTNLRRQPASIYFVVGPNDLDPLSSLIRLMFQQAVAITQREMPKADEPFPVLFLLDEFA 397 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 +L ++ L + + R +GG + +QS + L+ IYG+ A + + F Sbjct: 398 SLGRMDALSQAITTLRGYGGRLMIIVQSLSNLQ-IYGQDGAQNFLANCRLQLFMAPADKD 456 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVT 548 ++ + IG+ S+ + + + E L+ +++ L + T Sbjct: 457 TPDYISRAIGDFTRRARSKSWQTNDFMKS---NVQEREEGARLIRPEELRKLGEDTIVAL 513 Query: 549 LPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP--D 606 + P +KY ++ P F P E + R + +P Sbjct: 514 IQNQDPVRTDKVKYYEDKELCPIF-EAQTGPLPEPPSLFEGDEADTRIRLFVAAHDPGLI 572 Query: 607 VPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGI 666 + + + +PA E + + + P Sbjct: 573 DDTEARRKHLPAPDPSSTKEAPAKVILLPPPDAPASPPPSEPDYDA----STRKDVGPTQ 628 Query: 667 SESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGEDVEPG 714 V + + + ++ + ED+E Sbjct: 629 PTPAPVATETTNSVPKPLSKRMRAIARAKAASKARSLDEDMDEDLEAA 676 >UniRef50_C2BRH0 TraG/TraD family protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRH0_9ACTO Length = 613 Score = 284 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 98/633 (15%), Positives = 189/633 (29%), Gaps = 83/633 (13%) Query: 66 LEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLI 125 L +I + +T + D + L + A + A + ++ Sbjct: 2 FIAFLGLAAFWAANKIAFQVRTTWNKGLAFVQDHVLDDFHSPLHVSMYTADLGAGLGAIV 61 Query: 126 TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE- 184 F+V W GK G P D+ KD ++ + G + DS Sbjct: 62 LMFLV-WAYHNVGKMSQRVGEEHGSAQWAKPSDMKPFTDKDKRNQLLFTGSEALSLDSRK 120 Query: 185 ---IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD-----PSIDK 236 N + G+ G+GKS + Q I D GE ++ + Sbjct: 121 TQRNLNALVIGSSGSGKSRYF--VMPNLAQANTSFAITDPKGELLRLTGQSLKNAGYRIR 178 Query: 237 ILNPLD-ARCAAWDLWKEC---LTQPDFDNTANTLIPMGTK-----EDPFWQGSGRTIFA 287 + N +D A+ ++ + D I D FW+ + R + Sbjct: 179 VFNLVDFAQSDQFNPLAYFNPHQAEVDCTVLTENFITNTNGQKPTSGDGFWEKAERALLN 238 Query: 288 EAAYLMRND--PNRSYSKLVDTLLSIK-------------------IEKLRTYLRN---- 322 + S +VD L ++ EK+ Y + Sbjct: 239 ALISYVYFTQGGEGSLVDVVDLLARMQASEEDENAESDIDLIFEAVNEKIAEYDADPADW 298 Query: 323 --------------SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD 368 + N + +T S+ L + + Q + D Sbjct: 299 GSEAVSGIDGLRFAAAQYNTYLQGAGETKKSVIISLGVRMAPLHMAQMRKLLAA-----D 353 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR-----NRRVWFF 423 + + + LF+ DTHA+ + S++ L + ++ +V F Sbjct: 354 TIGLDKIGTEKTALFLVI-PDTHAAFNFIASIFYEQLFETNLYLADHNETGRLKFQVQCF 412 Query: 424 CDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR 483 DE + K+P + R G +Q+Y+Q + +Y + ++ ++ F Sbjct: 413 MDEFANIGKMPSFERKIAVMRSRGISTAIIMQNYSQGKAMY-KDDWETIVGNCDSLLFLG 471 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDL 543 E+ + +G++ + S G S + + L++ ++ LP Sbjct: 472 GNEKSTTEYISKVLGKQTIMSEETSQSKGRTG---SFSQSQRKLGRELLTADELGRLPGG 528 Query: 544 TCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLF 603 C L G P L AP F + S + A A + Sbjct: 529 ECIYILRGVRPFRSKKLP-------APSFTE-NYTYTPTMPASLAMPATPASLAEEDGDI 580 Query: 604 EPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD 636 E D E + + +P +++ D Sbjct: 581 EVDWEPGEPEESLLTDQSTCEPARSDDKEQEHD 613 >UniRef50_P18594 Protein virD4 n=16 Tax=Rhizobiales RepID=VIRD4_AGRT5 Length = 668 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 95/675 (14%), Positives = 201/675 (29%), Gaps = 67/675 (9%) Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 + + + + +Y +G + + + V +A+ Sbjct: 11 LAVSIVCSLAAGFCAASLYVTFRHGFNGEAMMTFSVFAFWYETPLYMGHATPVFYCGLAI 70 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA-----RMLKKDGKDSDIRIG 175 V+ ++S ++ E G + + R + G G Sbjct: 71 VVSTSIVVLLSQLIISFRNH----EHHGTARWAGFGEMRHAGYLQRYNRIKGPIFGKTCG 126 Query: 176 DLPIIRDS---EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF---VKSY 229 E + + AGK + + V+ D GE Sbjct: 127 PRWFGSYLTNGEQPHSLVVAPTRAGKGVGV--VIPTLLTFKGSVIALDVKGELFELTSRA 184 Query: 230 YDPSIDKIL--NPLDA--RCAAWDLWKECLTQP------DFDNTANTLIPMGTKEDPFWQ 279 D + +PLD R ++ + P + A LI K + Sbjct: 185 RKAGGDAVFKFSPLDPERRTHCYNPVLDIAALPPERQFTETRRLAANLITAKGKGAEGFI 244 Query: 280 GSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIE-----KLRTYLRNSPAANLVEEKIE 334 R +F + + D + L RN A + + Sbjct: 245 DGARDLFVAGILTCIERGTPTIGAVYDLFAQPGEKYKLFAHLAEESRNKEAQRIF----D 300 Query: 335 KTAISIRAVLTNYVKAI---------RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFIS 385 A + +LT+Y + L + F++ D +K +++ Sbjct: 301 NMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDL------RRKRTCVYLC 354 Query: 386 SNADTHASLKPVISMWLSIAIRGLLAMGENRNRR--VWFFCDELPTLHKLPDLVEILPEA 443 + + + P++ + + L ++ R V F DE L KL + + Sbjct: 355 VSPNDLEVVAPLMRLLFQQVVSILQRSLPGKDERHEVLFLLDEFKHLGKLEAIETAITTI 414 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 + G ++F IQS + L IY + + + F + + + + IG+ Sbjct: 415 AGYKGRFMFIIQSLSALTGIYDDAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFK 474 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 S YS + + L+ ++ L D V + G P ++Y Sbjct: 475 ARSTSYSQ---ARMFDHNIQISDQGAPLLRPEQVRLLDDNNEIVLIKGHPPLKLRKVRYY 531 Query: 564 TRPKVAPEFI-PRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQP 622 + + F PE + + + R+ + + + + + + + Sbjct: 532 SDRMLRRLFECQIGALPEPASLMLSEGVHRDGQDLSQQAAVT-EAQGLGDIDSIPNNMEA 590 Query: 623 QQPVSPAINDKKSDSGV--NVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEA 680 P + ++D++ +VP G IE + E+++ + + G +MA Sbjct: 591 ATPQNSEMDDEQDSLPTGIDVPQGLIESD-------EVKEDAGGVVPDFGVSAEMAPAMI 643 Query: 681 WQQENHPDIQQQMQR 695 QQ+ I QR Sbjct: 644 AQQQLLEQIIALQQR 658 >UniRef50_Q91UW5 TraN protein n=1 Tax=Plasmid pIPO2T RepID=Q91UW5_9ZZZZ Length = 837 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 114/751 (15%), Positives = 222/751 (29%), Gaps = 111/751 (14%) Query: 51 WQTFVNGCIYWWCTTL-EGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLW 109 W +V G + + T+ + +GKT + + + Sbjct: 6 WLKWVLGVVVFIAATVGAVWLAGFFFFAFSKTNPFGKT---DFSTWWTYWQFYQADPVIA 62 Query: 110 SAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKD 169 ++ +VA V+ V R+ + G N ++ + + Sbjct: 63 KRLKVSGIVAAVVAYGAPIVALIAAMREVRS------LHGEARFANAGEIEKAGLFG--N 114 Query: 170 SDIRIGDL--PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE--- 224 + I IG L + + +Q L +GK I + + V+ D E Sbjct: 115 TGIIIGKLKNRFLMFAGMQFVLLAAPTRSGKGVGI--VVPNLLNFSESAVVLDVKLENFL 172 Query: 225 FVKSYYDPSI--DKILNPL--DARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKED 275 + + NP + + ++ P + L P G +D Sbjct: 173 ITSKFRAKHGQEVFLFNPFSKNGQTHRYNPLGYISNDPRQRVTEILAIGYALYP-GGGKD 231 Query: 276 PFWQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK- 332 F+ + R +F + P R+ +L+ S K + ++ YL++ A +E+ Sbjct: 232 TFFDDAARNLFLGLCLYLCETPALPRTIGELLRQ-SSGKGQPIKKYLQDLITARNFKEET 290 Query: 333 ----------------------------------------IEKTAISIRAVLTNYVK-AI 351 + T SI A + + Sbjct: 291 TIGDDGEEVVTLVPIDQWDGQGLPPLSMECVDALNRFTSTSDNTLSSILASFNVPLTIWV 350 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRG--- 408 L F +RD +K ++I A+ A + +I+++ S I Sbjct: 351 SPLVDAATAANDFDVRD------VRKKRMTIYIGIPANKLAEAELLINLFFSQLINLNTD 404 Query: 409 -LLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE----DI 463 LL DE ++ + + +G + IQS Q+E Sbjct: 405 DLLHSKPELKYSCLLLMDEFAAPGRIGIIDKANAYMAGYGLRLLTIIQSPGQIEAEPRKG 464 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 YG ++A +L + + K A + +G G G S Sbjct: 465 YGRESARTLITNHACQIIYTPREQKDANEYSEMLGTYTFKAKGSSRQLG-GKAAGGRSES 523 Query: 524 KDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMEN 583 + +++ L+ +++ + + L P + Y + + P + Sbjct: 524 ESDQKRALLMPQELKEMSQRQQIINLENTKPIKCEKIAYFQDHVFMDRL--KSVAPSLAK 581 Query: 584 RLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD------- 636 + ++ E + DVP + + + + PA K D Sbjct: 582 LGKKLPTKKQLEDSWGSGECAVDVPYLNLDLHEAVVQARMRELKPADVAKGIDLRTLALD 641 Query: 637 -SGVNVPA-GGIEQELKMK------PEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPD 688 S V +P GIE E + SE+ EV D A E + Sbjct: 642 FSKVPLPEGAGIEPEQVEAFVDGFFDALDAANSYDD--SEAPEVDDDGASERPSDDELAA 699 Query: 689 IQQQMQRR--EEVNINVHRERGEDVEPGDDF 717 + Q +E+ +N E +D P D+ Sbjct: 700 LDAQAADDDGQEIAVN-SVEHADDETPADEL 729 >UniRef50_A6UMU5 TRAG family protein n=5 Tax=Rhizobiales RepID=A6UMU5_SINMW Length = 699 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 78/567 (13%), Positives = 195/567 (34%), Gaps = 42/567 (7%) Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVIC-LITFFVVSWILGRQGK 139 +Q + + R+ + + + +Q W A+ + + ++ + + ++ G Sbjct: 29 LQLFYRDGRILETTITSNPF--APIQQFWHYKTSPALQKVALGSMLPALLAAGLVACIGL 86 Query: 140 QQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS 199 + + + + + +K G I+R + ++ + G +GK Sbjct: 87 KPTSSPLGDAAFQDLASLRRRKWFRKQGHIFGRV--GRNILRTKDDRHHLIIGPTRSGKG 144 Query: 200 EVIRRLANYARQRGDMVVIYDRSGEFVK-----SYYDPSIDKILNPLDARCAAWDLWKEC 254 + A +++ D GE K + S + P + +++ Sbjct: 145 AG--YVIPNALMHEGSMIVTDLKGEVFKATAGYRRQNGSQVFLFAPGSEKTNSYNPLDFI 202 Query: 255 LTQ-----PDFDNTANTLIPM-GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTL 308 + D N A+ L+P E+ WQ + + + A + P + + + Sbjct: 203 RPERGNRTTDIQNIASILVPENTESENSVWQATAQQVLAGVISYITESPFYKDRRNLAEV 262 Query: 309 LS-----IKIEKLRTYLRNSPAA---------NLVEEKIEKTAISIRAVLTNYVKAIRYL 354 S + ++ L Y++ N E+ A S + ++ + Sbjct: 263 NSFFNSGVDLQALMKYIKEKEPYLSKFTVESFNSYVALSERAAASALLDIQKAMRPFKNE 322 Query: 355 QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 + + M ++ ++++ N L+P++++++ + L + Sbjct: 323 RIVAATNVT-----DMDLRAMKRRPISIYLAPNITDITLLRPLLTLFVQQVMNILTLEHD 377 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + V+F DE L ++ +++ LP + F IQ L++IYGE + SL Sbjct: 378 PNSLPVYFLLDEFRQLKRMDEIMTKLPYVAGYNIKLAFIIQDLKNLDEIYGETSRHSLLG 437 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 + + AE+ + +G++ SE + + + + + + L+ Sbjct: 438 NCGYQLVLGANDQATAEYVSRALGKRTIRYQSESRTIELMGLPR-RTKVEQIRERDLMMP 496 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR--PKVAPEFIPRDIN--PEMENRLSAVLA 590 +++ +P+ + + G P L++ K A F +I PE++ + Sbjct: 497 QEVRQMPENKMILLIEGQRPIFGEKLRFFQTQPFKSAEAFSQANIPQVPEVDYLSPKPVP 556 Query: 591 AREAEGRQMASLFEPDVPEVVSGEDVT 617 A E + E+ Sbjct: 557 ATTPEYASGGDPSVEIPSPAPAKEEKP 583 >UniRef50_Q5I734 VirD4 n=1 Tax=Dichelobacter nodosus RepID=Q5I734_DICNO Length = 656 Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats. Identities = 79/589 (13%), Positives = 193/589 (32%), Gaps = 71/589 (12%) Query: 32 CLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMN 91 + + IL + S+ V I LE + + K Sbjct: 8 FVLMIIIILFVISFLTCASFAFRVLMSIPAGTNYLEALL-------KHHFVLNNKVSSFP 60 Query: 92 AAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQ 151 + +L Y + F A ++ + L F ++ I ++ + ++ Sbjct: 61 HSIIL---YQLKYGAHYAGQFKAAWYISGALHLCIFMILVKIFEQKQSLYGDARFATLKE 117 Query: 152 LTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNF--------CLHGTVGAGKSEVIR 203 +T + K+ ++ + G+ I+ + L +GK + Sbjct: 118 ITKAGLLID--TKQVKENKGLFAGNKIIVGKIGTRYIALGGQLFAYLAAPTRSGKGVGV- 174 Query: 204 RLANYARQRGDMVVIYDRSGEFVK--SYYDP---SIDKILNPLDA--RCAAWDLWKEC-- 254 + +V+ D E + + Y + +P + R A W+ Sbjct: 175 -VIPVGLSYEHSMVVSDIKQELFEITAAYRAQCGHDVYLFDPFNPEGRTARWNPLSYVSR 233 Query: 255 ---LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN----------RSY 301 D + A LIP +D F++ S R +F + + Sbjct: 234 SAEQRVDDLNQIAICLIPDSGGDDSFFEESARKLFLGLGLYCLDKEAFWQKDNLVYVPTI 293 Query: 302 SKLVDTLLSIKIEKLRTY---LRNSPAANLVEE-------KIEKTAISIRAVLTNYVK-A 350 +++D + + + ++++ + + + +KT SI A LT + Sbjct: 294 KEILDLATQFSGDAIAHFSSLMQDTFISTIASQTINSAVSAGDKTFASILATLTANLTPW 353 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 + +G+ F +RD +K +++ + +I+++ S I Sbjct: 354 LSQPVSDATSGDDFDLRD------VRRKKMTIYLGIQPKDLSKASKIINLFYSQLINENT 407 Query: 411 AM----GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL--EDIY 464 ++ + + DE ++ L + + + +F QS AQL +Y Sbjct: 408 SVLPQNDPDLKYQCLMLMDEGTAAGRIAILEKAVSYMAGYNLRLLFIAQSPAQLADRKVY 467 Query: 465 GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGK 524 GE ++ + + ++ + +E + +G+ + + S G+S + Sbjct: 468 GEHGTRNILTNIALKILYKPNDVQDSESYSKLLGKITVREDT---SQSRGGGNRGISRTE 524 Query: 525 DMERQTLVSYSDIQSLPDLTCYVTLPG-PYPAVKLSLKYQTRPKVAPEF 572 ++++ L+ +++++P + G +P + Y P + Sbjct: 525 TLQQRDLMMPQELRAMPTTKEIILFEGLSHPIIAEKNCYFKDPVFIERY 573 >UniRef50_C6NY79 TraG n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NY79_9GAMM Length = 857 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 98/724 (13%), Positives = 205/724 (28%), Gaps = 125/724 (17%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 Y W + A +A +A V L R + Q + ++ G + V Sbjct: 85 YAEWQYPMMQKATEIAGAIAAVPTLAMGIWQFVRSQRLWQSQYQTDLHGSAHWASRDEIV 144 Query: 160 ARMLKKDGKDSDIR----------IGDLP-------IIRDSEIQNFCLHGTVGAGKSEVI 202 L D + +G +P ++ + ++ +GK + Sbjct: 145 KMALLPDKGLHPAKGQKPSKRVCYVGGIPNERDETDYLQHAGAEHIICFAPTRSGKGVGL 204 Query: 203 RRLANYAR-QRGDMVVIYDRSGE---FVKSYYDPSIDKIL----------NPLD------ 242 + + VV++D GE + KIL +PL+ Sbjct: 205 --VLPTLLGGWQESVVVHDIKGENYLLTAGWRKSIGQKILKFNPGFGMAADPLNGMEADN 262 Query: 243 -------ARCAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEA 289 +C ++ +E D N A ++ P G + WQ +G + Sbjct: 263 NGDLGTKEQCCHFNPLEEVRVGTPFEVKDVMNIATMIVDPDGKGLNDHWQKTGFALLTSV 322 Query: 290 AYL-MRNDPNRSYSKLVDTLLSIKIEKLRTYLRN-------------------------- 322 + +P+++ + L ++E + Sbjct: 323 ILHVLYAEPDKTMRGVAAFLNDPELEDVDQAFDKMMDTQHRPSNPVLLKQWTALYGNATV 382 Query: 323 ----SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG-EPFTIRDWMRGVREDQ 377 + +A ++ K + + + +++ R E F I D Sbjct: 383 HPAIAQSAKEMKNKAPNEKSGVISTMMSFLSLYRDPIVAEWTEYSDFHITDLQDADA--- 439 Query: 378 KNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE----------NRNRRVWFFCDEL 427 L++ ++ + LKP+I + +++ A + DE Sbjct: 440 -PVSLYLVTSPEDKNRLKPLIRLVINLIASKFTAEDRLIPKDGRMICKGKHPLLLLLDEF 498 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI---YGEKAAASLFDVMNTRAFFRS 484 P+L K+ + + + QS +QLED YG+ + + + + R F+ Sbjct: 499 PSLGKMDIFQDAIAFFAGYNVKLFLITQSKSQLEDEGRGYGKSGGSVIIENCHVRIFYAP 558 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGAD--PVRDGVSTGKDMERQTLVSYSDIQSL-- 540 AE+ + +G+K + + S P G S + + + L++ ++ L Sbjct: 559 NDVTTAEWLSKMLGKKTVVLENVTQSLEGSVLPSPKGQSRSLNYQARDLLTPDEVLRLRG 618 Query: 541 ---------PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE--FIPRDINPEMENRLS--- 586 V + G P + Y P P + E+ R Sbjct: 619 PIKRGSNIVKAGDMIVMVAGFAPVYGRQILYFKNPTFLERAQIPPPATSDEISARAKDYY 678 Query: 587 ------AVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVN 640 + E+ + E D + P D D + Sbjct: 679 AKLLGHDKPTSIESTKPDFDTFEESDYTDTPPAGSSAADGSPADGSPAGPADGSLDPTNS 738 Query: 641 VPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVN 700 A + P + G S++ + + E+ Sbjct: 739 DTAPRSGADGSSAPRSGAPRSGADGTSDTRSGDQNGGGGGGLDTGTILEEGADEDAEDGT 798 Query: 701 INVH 704 ++V Sbjct: 799 LDVE 802 >UniRef50_C5SH52 TRAG family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SH52_9CAUL Length = 677 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 94/657 (14%), Positives = 188/657 (28%), Gaps = 64/657 (9%) Query: 89 RMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG 148 + + E + + A + LV +I F ++ L + +N Sbjct: 43 EFTPLLWISLWRVADDIEPMKPGLIRALGLGLVPVVIVLFALAHALTG---KYGQNIHGA 99 Query: 149 GRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANY 208 R T + + G ++R + + GK + + Sbjct: 100 ARFATLTEMRRRGLFSRKGIIVGRCAA--TLLRYPGEEFVMIAAPTRTGKGVGV--VVPN 155 Query: 209 ARQRGDMVVIYDRSGE---FVKSYYDP--SIDKILNPL--DARCAAWDLWKECLTQP--- 258 +++ D E + + +P A+ W+ P Sbjct: 156 LLDFEGSILVVDIKFEHFQLTSAVRKAMGQEVFLFHPFAAGAQTHRWNPLDTIRRDPEHR 215 Query: 259 --DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND-PNRSYSKLVDTLLSIKIEK 315 D A+ L P +D FW R +F L+ P R V + E Sbjct: 216 VNDILAIAHVLYPHAKDKDGFWNEQARNLFLGVVLLLMEQAPERVNMANVFAEAGGRGEA 275 Query: 316 LRTYLRNS--------------PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HN 360 +TYL A E T SI A + + + Sbjct: 276 PKTYLARKSTELKPGPFTQICIDALARFCLTSENTLTSILATFNGPLTVFSDPKVASSTS 335 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR-- 418 F ++D +K +++ ++++++S I+ + + Sbjct: 336 TSDFNLQDL------RKKRMTIYLGIGPAELLPGALILNLFVSRLIQQNVDRQPADDPTL 389 Query: 419 --RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 DE L K+ L + +G + IQS +QL+ +YGE A +L Sbjct: 390 CVPCLLILDEFAALGKVEVLAKASAYIASYGLRLLTVIQSQSQLDSLYGEHDARTLRTNH 449 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 F A+ + +G + + + V S +++++ L + Sbjct: 450 ALHIHFAPRDPLDAKRLSERLGYFQVEETARSRMVRNGTV--ASSQWTNIQKRALRLPQE 507 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 +Q + + L G P Y P F+ R + L ++ R +G Sbjct: 508 LQLMGPDEAILILDGIAPIKAQKAYYYKNPV----FLQRLRSA--SAYLQSLPRGRFTQG 561 Query: 597 RQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKM---- 652 + + ++ + P P + + P G + K Sbjct: 562 QLQRAACTDLFLKLPVSSTLPAEP-PLVPQAMEAQAQGEVVLSGAPKGPRQPAWKKWAKK 620 Query: 653 -KPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERG 708 PP ++ + + Q+ RR++V I E+ Sbjct: 621 TSNASGTNDAPPPASTDPAVSAERDKTPDPPPQR----QKARPRRKKV-IETDPEKL 672 >UniRef50_A3ETT1 Probable conjugal transfer protein (TraD) n=1 Tax=Leptospirillum rubarum RepID=A3ETT1_9BACT Length = 697 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 135/646 (20%), Positives = 252/646 (39%), Gaps = 50/646 (7%) Query: 38 WILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVL- 96 + G+++ + S ++ + L +Y I G R+ A+ L Sbjct: 18 LLFAGVLVTVLTSLGGWIAWMKMTHGYPVRLSVPLWAEAALY-ILPPGHVVRLGPAKGLD 76 Query: 97 -HDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 + + W + V + I ++ R + G QL + Sbjct: 77 EINPVLAHSLLLTWKVVSSLSFVFVGIAVM----------RLARGPEPVRHKRGDQLRKD 126 Query: 156 PKDVARMLK-KDGKDSDIRIGD-LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRG 213 + + ++ + G+ I + + I E+++F L G+ G+GK+ V+ + + A QRG Sbjct: 127 AVTIRKQIRTRYGRPDGIFVHPEIRIPEPLEVRSFSLVGSPGSGKTTVLNGMVDQAIQRG 186 Query: 214 DMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 D +I+D G+F + D +IL+P DAR W L + T+ + LIP+ + Sbjct: 187 DRSLIFDFKGDFTERIPD-GKKRILSPWDARAVRWALGSDVSTEVQARLLSECLIPINPR 245 Query: 274 EDP-FWQGSGRTIFAEAAYLMRNDPNRSY------SKLVDTLLSIKIEKLRTYL---RNS 323 + W + R I + + + ++ L+ +L +++ L N Sbjct: 246 ANEQMWGNASRAILRAELHKLMAERRGTWGFHELGDALLADILCPDSDRVVQTLVTRFNP 305 Query: 324 PAANLVEEKIEKTAISI----RAVLTNYVKAIRYLQGIEHNGEPF-TIRDWMRGVREDQK 378 A+ +V++ KT +S+ A L + + R+ + ++ G PF +R ++ G Sbjct: 306 EASRIVQDLTSKTTLSVLIDQSAALGDALLLSRFDRELKKAGRPFLPLRSYLSGEIRGTP 365 Query: 379 NGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN--RRVWFFCDELPTLHKLPDL 436 + + + D+ +S +++ + + RR+WFF DE+P ++P + Sbjct: 366 PP-VILPVHPDSRTLTSAFVSAVFALSSSIVTHFPDAEPSARRIWFFLDEVPQAGRIPPI 424 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 + L AR G V G Q+ AQ+ + YGEK + + F + S + ++ + Sbjct: 425 TDFLVTARSKGCRTVLGFQTPAQVAETYGEKTLEIWDNATGVKIFLQCVSPEAKKYVSQS 484 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL----PDL-TCYVTLPG 551 IGE+E L + + G P G +T ER+ LVS + SL + T V + G Sbjct: 485 IGEREVLAFKKSENVGIAPAHTGHTTNWVDEREKLVSPDEAGSLLGPGKNGVTGIVQIAG 544 Query: 552 PYPAVKLSLKYQTRPKVAPEF------IPRDINPEMENRLSAVLAAREAEGRQMA----S 601 PAV L+ ++ PK A + + PE R + EG Sbjct: 545 CDPAV-LTWPFRNDPKAAEARRLLTLPLRGTLAPEAPGRSGSERERVPEEGIDRPETRRE 603 Query: 602 LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIE 647 EP V QP P A +D+ + A Sbjct: 604 AKEPGRRIRPEPASVRVTPQPSAPGKEAGDDESPVGEIAQEALASA 649 >UniRef50_Q9PHI9 Conjugal transfer protein n=1 Tax=Xylella fastidiosa RepID=Q9PHI9_XYLFA Length = 656 Score = 278 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 86/657 (13%), Positives = 193/657 (29%), Gaps = 56/657 (8%) Query: 73 IKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSW 132 + ++ + + K + + +Q +++ ++L + L Sbjct: 16 YLAGGIFLMAFGHKFEESTPLTLYQYWFYYGAEKQAKKWLYISSGISLAVLLAPLLFFF- 74 Query: 133 ILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHG 192 + G +++ + + + + Q+ + Sbjct: 75 --------SHAEKSLFGDARFAKLREIKNAGLMGKRGIILGLYMNTYLLFGGSQHVSISA 126 Query: 193 TVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSID--KILNPL--DARC 245 +GK I + D VV D E +Y + NP+ + + Sbjct: 127 PTRSGKGVGI--VIPNLLSWPDSVVCSDIKIENFAITSAYRQKHGQECYLFNPVSTEYKT 184 Query: 246 AAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR- 299 ++ P D N L P D W + R++F ++ + Sbjct: 185 HRYNPLSYISEDPHFRIDDIQKIGNMLFPDVPGTDVIWTATPRSLFLGIVLMLLETQGKL 244 Query: 300 -SYSKLVDTLLSIKIEKLR--TYLRNSPAA-------------NLVEEKIEKTAISIRAV 343 ++ +++ L + + A + + E T + Sbjct: 245 VTFGQVLRETLQDGDGSVYFGKIINERAKAGNPYSGPCIRALNSYISIASENTRSGVMTS 304 Query: 344 LTNYVK-AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 + ++ + + +G F +RD +K +F+ D L P+++++ Sbjct: 305 FRSKLELWMNPIIDAATSGNDFDLRDL------RKKRMSVFVGVTPDNLKRLAPLLNLFY 358 Query: 403 SIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYA 458 I R L + DE L KL L + + +G + QS A Sbjct: 359 QQLIDLNTRELPEHNPALKYQCLLMMDEFTALGKLDCLADGISFIAGYGLRLLPIFQSPA 418 Query: 459 QLEDIYGEKAAASLFDVMNTRAFF--RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV 516 Q+ YGE AA + + + + K A + +G + SE G Sbjct: 419 QIVGKYGEAAAETFSTNHAAQIIYPPKVTEIKTAREISEWLGFQTVKGVSESKGKGIF-T 477 Query: 517 RDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD 576 + S +R+ L+ +I SL V + P + ++Y + Sbjct: 478 KKSESQSISDQRRALLLPQEITSLGSKRALVVVEDCPPILAKRIRYFREHVFMDRL--KS 535 Query: 577 INPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD 636 ++P + + + ++ + + VP + E + + + Sbjct: 536 VSPSLAKFGNKLPNEKQLKAIIESGELAVKVPVIDIDEHICMVSGSTVAQTTVVVQSNGK 595 Query: 637 SGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQM 693 + V+V I + L S + D EA ++ +Q Sbjct: 596 TEVHVFERLITPADMPNLAKIALANLNIDFSAVEKAKDGQLDEAALHSYVENLSKQS 652 >UniRef50_A4TUK6 Conjugal transfer protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUK6_9PROT Length = 602 Score = 278 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 79/563 (14%), Positives = 160/563 (28%), Gaps = 71/563 (12%) Query: 63 CTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVI 122 Q + + L + A + + Sbjct: 9 AIASAVFALFTVWQEFFAFHALQSDSWAWVWKYLQA--YGHVPGFIQWGIFGATAGTIAL 66 Query: 123 CLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLP---- 178 L+ + I G+ + + G DV + + + +G P Sbjct: 67 ILLIQAIAMRIGGQTRHGSYDEKNLHGSARWARKADVKEAGLL--RKTGVVVGGWPKWRG 124 Query: 179 --IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPS 233 +R ++ +GK + + V++ D GE + Sbjct: 125 AKTLRHDGPEHILTFAPTRSGKGVGL--VLPTLLSWPSSVLVLDIKGENWRLTSGWRASQ 182 Query: 234 IDKI--LNPL-DARCAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRT 284 +I +P + ++ E D N A +I P G FWQ SG Sbjct: 183 GQRILKFDPTAEEGSCHYNPLAEVRIGTGHEVADAQNIATMIIDPDGKGLADFWQKSGYA 242 Query: 285 IFAEAAYLMRNDPNRSYSKL-----VDTLLSIKIEKLRTYLRNS---------------P 324 A R +++ +D +L+ E L + L + Sbjct: 243 WLTGAILYTLYKIRRDENRIASLPDIDAVLTAVGEGLDSLLADMVSVEAGTEAATRLIQA 302 Query: 325 AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWMRGVREDQKNGWLF 383 AA + ++ + +++ + R + +G F + + M + L+ Sbjct: 303 AAQEMRDRAAQERSGVQSSSKVDLSLYRDPMIARNISGSDFRLDELM----NSEAPLSLY 358 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLL-----AMGENRNRRVWFFCDELPTLHKLPDLVE 438 I L+P++ + L++ +R L+ R+ DE ++ KL Sbjct: 359 IIIPPSDIDRLRPLLRIILNLFMRRLMQNVGADGRATHKHRLLLMLDEFTSIGKLEIFER 418 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 L +G IQ QL+ YG++ S+ + R + A+ + G Sbjct: 419 SLAFMAGYGLKAFLIIQDLLQLQGTYGKE--NSIMGNCHIRIAYAPNDVTTAKTLSDMCG 476 Query: 499 EKEHLKASEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDIQSLP--------------DL 543 + ++ S A + V+ + L++ + L Sbjct: 477 KATIVQTKRSRSRRALQVIGGNVTDNVSEVGRPLLTPDECMRLKAARKSRRDPEKIVEAG 536 Query: 544 TCYVTLPGPYPAVKLSLKYQTRP 566 V G P + L Y Sbjct: 537 DMLVFSAGAPPILGRQLLYFFDK 559 >UniRef50_C8WH79 TRAG family protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WH79_EGGLE Length = 610 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 90/561 (16%), Positives = 170/561 (30%), Gaps = 92/561 (16%) Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIR 173 +A V L+ I + V + L R G + E G K+ + + K ++I Sbjct: 55 MALAVGLMAACIPWAVWARSLVRAGTYRQGEEH--GSARWGTLKEGRAFMDRKDKANNIL 112 Query: 174 IGD---LPI------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE 224 + L + ++ +N C+ G G+GK+ + Q ++ D G Sbjct: 113 LSRDFALALKPKRFDLKHDRNRNVCVLGGPGSGKTR--YYVKPNLMQANADFLVTDPKGT 170 Query: 225 FVKS----YYDPSIDKI-LNPLD-ARCAAWDLWKECLTQPDFDNTANTLIPMG-----TK 273 + D D + D +R ++ Q D LI Sbjct: 171 LLGDVGWMLEDAGYDIRTFDTTDFSRSMHYNPLSYVKDQADILVFVECLIKNTTPDDRKG 230 Query: 274 EDPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIKIEK--------LRTYLRN 322 DPFW+ S R ++ + R + L+ L + + L Sbjct: 231 SDPFWENSERLLYTALVAYLVYHARPEERDLNSLMLLLSLAEAREEDESYMSPLDLIFEE 290 Query: 323 SP--------------------------------------------AANLVEEKIEKTAI 338 + KT Sbjct: 291 LETGMRFMERGRGREAREERPFDDGGDWGWVRIAEPRDPEEDFALSNYRAFKVAAGKTLK 350 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 SI +K + + + + +S +D+ ++ + Sbjct: 351 SIIISCNVRLKPLSVDAVSDLVAYD----EMALDSLGSGEGSHAIFASMSDSDSTFDFLF 406 Query: 399 SMWLSIAI-----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 ++ + A L G + R V F DE + +PD ++ AR + Sbjct: 407 ALLMWQATSVLYKTALARFGGSLKRPVHFLLDEFGNIGTVPDFERVIATARSRNVSFSII 466 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 +QS +QLE Y ++ A ++ D +T F S + E + +G++ +E S GA Sbjct: 467 LQSASQLERAYKKEGAKTILDCCDTVVFLGGKSTETNEMISKMVGKQTVKVLTESDSRGA 526 Query: 514 DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI 573 + + ++ + L++ ++ LP V + G YP + + P PE Sbjct: 527 N---RSTTQNYNVIERDLMTPDEVGRLPRDESIVLISGTYPLKGAKYRIEEHPSY-PEVD 582 Query: 574 PRDINPEMENRLSAVLAAREA 594 P E R Sbjct: 583 PGHAGARHEERFDFKEYRERR 603 >UniRef50_C6XEP7 TRAG family protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEP7_METSD Length = 819 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 117/739 (15%), Positives = 217/739 (29%), Gaps = 114/739 (15%) Query: 32 CLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMN 91 I F+ + +V S + + + R + Sbjct: 14 WWVISFFFICLVVSSFITSQFVAYKFAYQPALGNPWFSLGVFPIYGASD--WIHWMLRWS 71 Query: 92 AAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQ 151 L D+Y+ F ++L++C R + + + + G Sbjct: 72 DETGLIDEYLTQGM----YIFDAGVAISLLLCAFI------NYVRTRNKGTPDHLHGSAH 121 Query: 152 LTDNPKD------------VARMLKKDGKDSDIRIGDLP--IIRDSEIQNFCLHGTVGAG 197 + + + + KD S G I+RD + + + +G Sbjct: 122 WASDEEIRATGLVAKDGVCIGAVDMKDTSLSGKIFGRWHRMILRDDQKTHILMAAPTRSG 181 Query: 198 KSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKILNPL----DARCAAWDL 250 K + + +++D E + + ILN D A W+ Sbjct: 182 KGVGL--VLPTLLSWRYSTLVHDVKMENFALTSGFRHKAGQLILNFSPTNKDGTAARWNP 239 Query: 251 WKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMR---NDPNRSY 301 E D N A + P + W + + + D R+ Sbjct: 240 LDEIRTWSMDDVRDAQNIAAMVADPDAKGMEDHWVSTSYKLLTGVFLHIVYSGKDGERNL 299 Query: 302 SKLVDTLLSIKIEKLRTYL------------------------RNSPAANLVE----EKI 333 + E ++ L + P LV +K Sbjct: 300 PAAAKFIADSSFEDVKQMLSFMLGYEHDPDGRMNWRDESGRPTKTHPEVLLVASEMLKKE 359 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 EK S+ + + + F +RD M + + Sbjct: 360 EKELGSVISSAVTKLGLFSEPIVAMNVAVSDFRVRDLMNLT----QPVSCYYIVPPADKE 415 Query: 393 SLKPVISMWLSIAIRGLLAMG--------ENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 L+P+ ++ + IR L E R+ DELP+L KL L + L Sbjct: 416 RLRPLSRLFFAFVIRRLTEEMKFEGGKSIEGYKHRLLLMIDELPSLRKLDVLQDGLAYIA 475 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 +G V IQ QL+D YG+K S+ + R + + + A + +G+K Sbjct: 476 GYGLKAVMIIQDMIQLKDAYGDK--ESVSAGCHIRVAYAPNTMEEARPLSEMLGKKTVEY 533 Query: 505 ASEQYSYGADPVRDG-VSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 S S G VS + + L++ S++ LP + G P LKY Sbjct: 534 ESRNLSGSRTTHALGQVSLSTQLVGRELMTPSELLELPPSDSIIKAAGFAPIRAKKLKYY 593 Query: 564 TRPKVAPE------------FIPRDINPEME-------NRLSAVLAAREAEGRQ-MASLF 603 P FI + ++ +L + R+ + ++ Sbjct: 594 EMPVFQSRAEISPPARCSIQFIKDGSVVTLWAMLLVEKDKQGNLLVWINLKDRELLPPVY 653 Query: 604 EPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLP 663 E+V + E+ + D + + N P I + ++ E + + Sbjct: 654 AVIRQELVDDGQLISKERKF-----DLIDDQGNIRSNGPFK-IANKFRLLSRESDDLDMN 707 Query: 664 PGISESGEVVDMAAYEAWQ 682 S S +VD AAY+ Q Sbjct: 708 DEFSVSLRLVDPAAYKQPQ 726 >UniRef50_Q5DY60 Protein VirD4 n=1 Tax=Vibrio fischeri ES114 RepID=Q5DY60_VIBF1 Length = 608 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 77/584 (13%), Positives = 174/584 (29%), Gaps = 61/584 (10%) Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGG 149 + ++ + + V A ++ I +I ++ E E G Sbjct: 10 VTPYTIIEQWIYYSEDMRYQKSLVTALLIGFGIAVIAPTLLFLF------NTKEKEELHG 63 Query: 150 RQLTDNPKDVARMLKKDGKDSDIRIGDL--------PIIRDSEIQNFCLHGTVGAGKSEV 201 ++ + + I IG + + L +GK Sbjct: 64 SARFATQDEIKKEGLTNNNGKGILIGQFNGFLGFFKTYLYFNSDSFILLIAPTRSGKGVG 123 Query: 202 IRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSI--DKILNPL--DARCAAWDLWKEC 254 + + +VI D E Y + NP + + ++ Sbjct: 124 V--VIPNLLVYNQSMVILDLKQENFSITSKYRAKYGQQVFLFNPFTENGQTHRYNPLSYV 181 Query: 255 LTQP----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTL 308 D + P+ ++ FW +F A ++ P + +L+ Sbjct: 182 REGDCKIGDILTITASFYPIDDLKNSFWNNQASNLFLGLALMISETPSLPFTIGELLRQ- 240 Query: 309 LSIKIEKLRTYLRNS----------------PAANLVEEKIEKTAISIRAVLTNYVKAI- 351 S K + L+ YL+ A N + + ++ A + Sbjct: 241 SSGKGKPLKEYLQGIMDDREKSSSPLSESCIDALNRFIALTDNSLSNVLASFNAPLTLWA 300 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI----R 407 L + F +R+ +K ++I D + +++++ S I + Sbjct: 301 NPLFDAATSANDFDLREL------RKKKMTVYIGITPDYLEQAERILNLFFSQLININTK 354 Query: 408 GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 L + DE + ++ L + + +G + IQ+ +QL+ +YG++ Sbjct: 355 ELPEHNPELKYQCLLVMDEFTAMGRIGILAKSVSYMAGYGLRLLTIIQAPSQLDSVYGKE 414 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME 527 A + + F ++ AE + IG K S + G D S + Sbjct: 415 EARTYKTNHAGQILFAPRENEDAEEYSKAIGYKTVKAKSNSKTRGELKQTDSTS----DQ 470 Query: 528 RQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSA 587 R+ ++ +I+ + + + P ++Y P + + + Sbjct: 471 RRAVMLPQEIKEIGMWKEIICIENLKPIFCKKVQYFNDPVFIDRLKEVSSSLKSIEGIPT 530 Query: 588 VLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIN 631 + A + + P + + S T + P P + Sbjct: 531 RDQLKNAITNKELQIEIPTLERIDSKPTPTLFDSPLNQPLPLSD 574 >UniRef50_Q07GD2 VirD4 protein, putative n=6 Tax=Bacteria RepID=Q07GD2_ROSDO Length = 469 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 73/466 (15%), Positives = 148/466 (31%), Gaps = 53/466 (11%) Query: 148 GGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLAN 207 G N K++ ++ ++DG ++ + AGK + Sbjct: 16 HGSARFANRKELKKLQRQDGLLIGRNPHTGRLLHYDGPAHLITLAPTRAGKGVG--TVIP 73 Query: 208 YARQRGDMVVIYDRSGEFV----KSYYDPSIDKILNPLDARCAA---WDLWKECLTQ--- 257 V++ D GE ++ +L+P + ++ Sbjct: 74 NLLAAERSVLVIDPKGENARIAGEARRRFGTVYVLDPFEVSGHPSAAYNPLDRLTPDSLD 133 Query: 258 --PDFDNTANTLIPMGTKE--DPFWQGSGRTIFAEAAY--LMRNDPNRSYSKLVDTLLSI 311 D + L+ + + W + I + D +R V L++ Sbjct: 134 LGEDAASLTEALVMDPPGQVTEAHWNEEAKAILGGLIMFCVCHEDRDRRSLATVREYLTL 193 Query: 312 KIEKLRTYLRNSP-----------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-H 359 EKLR L AAN K ++ A S+ + + + + Sbjct: 194 PPEKLRALLELMQDSDEAGGLIARAANRFLGKADREAASVLSNAQRHTHFLDSPRIARCL 253 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR--- 416 F D + +F+ + + + + +S A++ + E Sbjct: 254 ARSDFAFSDL------RHRITSVFLVLPPNRMDAYSRWLRLLVSQALQDVARDAERPQGA 307 Query: 417 --------NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 F DE L +L + + +G +Q +QL+D+YG Sbjct: 308 SDGHSQRLKTPALFMLDEFAALGRLEAVERAMGLMAGYGLQLWPILQDMSQLKDLYG-DR 366 Query: 469 AASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMER 528 A + + F + A++ + IG++ ++ + G DG S ++ Sbjct: 367 ANTFIANAGVQQVFGVNDFETAKWLSQMIGQETAGFQTDSFKPG-----DGPSFSNNLTG 421 Query: 529 QTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIP 574 + L++ +I LP + + G AV L+Y P+ A F P Sbjct: 422 RDLLTPDEIMQLPPDRQLLRVQGQATAVAQKLRYFADPEFAGLFTP 467 >UniRef50_A6GUT0 Conjugal transfer protein TraG n=1 Tax=Limnobacter sp. MED105 RepID=A6GUT0_9BURK Length = 753 Score = 275 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 96/729 (13%), Positives = 181/729 (24%), Gaps = 123/729 (16%) Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVAL 120 W T + + + G + AF V+ Sbjct: 37 WIATQVAAHMLGYQPALGEPLARLGSYALYTPIDYFLWLLKFGNVQGTEDAFFYGEVILF 96 Query: 121 VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK----------------------- 157 + + V + R K + ++ G + Sbjct: 97 ALHFLFVPAVWLAVRRAKKIGGKTDLHGSARWAKKEDIYTATLLRRPVSALRKLAHKYID 156 Query: 158 ----DVARMLKKDGKDSDIRI----------GDLPIIRDSEIQNFCLHGTVGAGKSEVIR 203 + D + G+ + ++ +GK Sbjct: 157 VNKFSFMKFFLGDKPPKNFGCYIGAWIDPDSGEYHYLAHDGPEHLLTFAPTRSGKGVG-- 214 Query: 204 RLANYARQRGDMVVIYDRSGE---FVKSYYDP--SIDKILNP--LDARCAAWDLWKEC-- 254 ++ V++D GE Y P D ++ +E Sbjct: 215 QVIPTLLSWPHSTVVHDIKGEAWALTAGYRKAKGHRVLKFEPSEPDGSSVRFNPLEEVRL 274 Query: 255 ---LTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMRN--------------- 295 D N A ++ P G W +G + + A + Sbjct: 275 RTPREVADVQNIAQMIVDPDGKGMADHWAKTGHELLSAAILHILYLGHTKTLRGLVSFFC 334 Query: 296 DPNRSYSKLVDTLLSI--KIEKLRTYLRN------------SPAANLVEEKIEKTAISIR 341 DP R+ ++ +++L+ + ++ + +A K E ++ Sbjct: 335 DPARTIEQVAESMLTGQHDPHGAQGWIDLNTGEPTNTHPVVAESARSFLNKSENERSGVQ 394 Query: 342 AVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 + +Y+ R F I D M L++ + A L+P+I + Sbjct: 395 STAMSYLSLYRDPIVAANTEVSEFRIHDLMNF----DDPVSLYLVVPPNDKARLRPLIRL 450 Query: 401 WLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 L+ R + R+ DE P L KL + E L +G Sbjct: 451 VLNQIFRQTTEKMDFADGRSVAGYKHRLLMMLDEFPALGKLELVQESLAFVAGYGIKCYL 510 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 Q QL YG+ S+ + R + + AE + G K + YS Sbjct: 511 ITQDLTQLYAAYGKD--ESILSNCHVRMAYAPNKVETAELLSKYCGVTTINKQTRSYSGS 568 Query: 513 A-DPVRDGVSTGKDMERQTLVSYSDIQSLP-------------DLTCYVTLPGPYPAVKL 558 +P+ V + ++ L++ + LP + G P Sbjct: 569 RLNPLLMHVMAAEQETQRPLLTADECLRLPGAVKSQDGKNILEPGDMLIFPAGSPPIYGK 628 Query: 559 SLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQ 618 + Y P F R L + R P Sbjct: 629 QILYFKDPI----FDARSKIKAPLESDRLHLRVTKNISRTHVVEPAPVAKNTTETASTAS 684 Query: 619 AEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAY 678 A + E+EL+ E + I S E + Sbjct: 685 AATTAPVAP---------AIAAAAVQYSEEELEQLNAEADDTDDLDLIFTSDEEEPTSPA 735 Query: 679 EAWQQENHP 687 +A + Sbjct: 736 QAPESSKES 744 >UniRef50_B7JB37 TraG/TraD family protein n=3 Tax=Acidithiobacillus ferrooxidans RepID=B7JB37_ACIF2 Length = 834 Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats. Identities = 81/579 (13%), Positives = 175/579 (30%), Gaps = 103/579 (17%) Query: 137 QGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR--------------- 181 +G + + + K+ A K+ + R+ ++P Sbjct: 192 KGLKGGSDWARWQERREKRKKEAAEWRKRRAEREKKRLSEIPEPTVFDRFDSPHVCYVGA 251 Query: 182 -----------DSEIQNFCLHGTVGAGKSEVIRRLANYARQ-RGDMVVIYDRSGE---FV 226 + ++ + +GK + + D VV++D GE Sbjct: 252 FVENGAATPLQHTGAEHILVFAPTRSGKGVGL--VLPTLLDGWMDSVVVHDIKGENFHLT 309 Query: 227 KSYYDPSIDKI--LNP--LDARCAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDP 276 Y I +P + ++ D N A ++ P G + Sbjct: 310 AGYRKAMGHHILKFSPGSVSEEGCHFNPLDAVRVGTQYEVKDVMNIATMIVDPDGKGLND 369 Query: 277 FWQGSGRTIFAEAAYL-MRNDPNRSYSKLVDTLLSIKIEKLRTYLRN------------- 322 WQ +G + + P+++ + L +E + Sbjct: 370 HWQKTGFALLTSIILHVLYAMPDKTLRGVAAYLNDPTLESVDVAFERMMQTEHDPDEQYG 429 Query: 323 ---------------SPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI-EHNGEPFTI 366 + +A + K E + + + +++ R F I Sbjct: 430 WRDGNGQCSRVHPVIAQSAREMLNKAENEKSGVISTMMSFLSLYRDPIVAKWTEYSDFRI 489 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE----------NR 416 D ++ ++ L++ ++ + LKP+I + L+ A Sbjct: 490 ADL----QDAEQPVSLYLVTSPEDKNRLKPLIRLVLNQIASQFTAEERLEAKDGRIVAKG 545 Query: 417 NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI---YGEKAAASLF 473 R+ DE P+L KL ++ + + Q AQLED YG+ A ++ Sbjct: 546 KHRLLLLLDEFPSLGKLDVFLDSIAFLAGYNVKLYLITQDIAQLEDEGHGYGKAGAKTII 605 Query: 474 DVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD--PVRDGVSTGKDMERQTL 531 + RA + + A++ + +G + ++ S+ G ST + + L Sbjct: 606 GNCHIRAAYAPNQVETAKWISDMLGTRTVTMENDNQSFDGSLFGQNKGYSTSLSYQSRPL 665 Query: 532 VSYSDIQSLP-----------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPE 580 ++ ++ +L V G +P L Y P+ R + Sbjct: 666 LTADEVMTLRGPEKEGANIKTPGDMLVFAAGFHPIYGQQLLYFKNPEWLDRASMR-WPEK 724 Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQA 619 ++ A + G +L P + + G+D + Sbjct: 725 SDSIPGARKDYKAILGESGGTLPIPHIEKKPEGQDPVEE 763 >UniRef50_D2UFC9 Putative type iv secretory pathway, conjugal transfer protein n=4 Tax=Xanthomonas albilineans RepID=D2UFC9_XANAL Length = 564 Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 91/527 (17%), Positives = 160/527 (30%), Gaps = 57/527 (10%) Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 +Y + W + +A + ++ I+ + E+ G + Sbjct: 45 WRYWQVVDQPAWHPYAPKIKLAGICGFGLPVMLYLIMVYAMLRTKAQELYGNARWARRDD 104 Query: 158 DVARMLKKDGKDSDI--RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM 215 + KD I R G I S ++ L + GK + + + Sbjct: 105 LSRHDVLKDDPRGLIACRFGRRFIRIQS--KHLLLAASTRGGKGVSV--VIPNLLAWLES 160 Query: 216 VVIYDRSGEFVKS----YYDPSIDKILNPL--DARCAAWDLWKECLTQP-----DFDNTA 264 VI D E + + +P D W+ P D A Sbjct: 161 AVILDVKREAWEKTAGQRAKYGQVYMFDPFSDDGSTDRWNPLGYVRLDPNHRNGDIVAIA 220 Query: 265 NTLIPMGTKEDPFWQGSGRTIFAEAAYLMR-----------NDPNRSYSKLVDTLLSIKI 313 +TL E+PFW GR F A + + + L + Sbjct: 221 STLYKEMRGENPFWPAMGRKTFVAACECLFDDYASKKGTAFETGLPTLGGVYRLLAGAHL 280 Query: 314 E-------KLRTYLR--------NSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 + L LR + NLV E +I L + Sbjct: 281 KPGQSMQHYLGELLRQPTLGTHARTGLNNLVGLAPETFTSAIETALAPLNIFSNPIVDAA 340 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMGE 414 + F + + V+ +++ + K V++++ AI R L Sbjct: 341 TSDNDFDLSKLRKTVQ------SIYVGVSPAKLIEAKGVLNLFFEQAIKLNGRELPEHNP 394 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + F DE L ++ + + +G V IQS AQLE +YG A L Sbjct: 395 ELKYQCMFMLDEFTALGRVEIVPVAVGWVAGYGIRIVIVIQSIAQLESVYGADTARGLIT 454 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 + R F + AE + +GE + SYG S + ++R+ L++ Sbjct: 455 NLGVRIVFTPREQRDAEEYSKMLGETTVRRRQRTQSYGQG---SSHSYTEVIDRRPLMNP 511 Query: 535 SDIQSLPDLTCYVTLPG-PYPAVKLSLKYQTRPKVAPEFIPRDINPE 580 +++ L V + G YP + + Y P + P Sbjct: 512 DEVKGLSPDKAIVFIEGVGYPILANKIFYYKDSYFKPLLLKAPQVPR 558 >UniRef50_C7GFT5 TraG family protein n=15 Tax=Bacteria RepID=C7GFT5_9FIRM Length = 730 Score = 274 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 87/671 (12%), Positives = 215/671 (32%), Gaps = 61/671 (9%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 D++ C+ + + V A+ I L + + + + + G + +N Sbjct: 40 FMDRFNEVCAVPFANYYNSNTVKAVAIALGIYAMAIVMYYTSQRNYMPGKEFGTARF-EN 98 Query: 156 PKDVARMLKKDGKD-SDIRIGDLPIIRDSE----IQNFCLHGTVGAGKSEVIRRLANYAR 210 PK V ++L ++ + I ++ + D N + G GAGK+ + Sbjct: 99 PKQVNKILADKDENFNRILSQNVKMSLDFRRLKLNGNILICGGSGAGKT--FYEVKPNLM 156 Query: 211 QRGD--MVVIYDRSGEFVKSYY-----DPSIDKILNPLD-ARCAAWDLWKECLTQPDFDN 262 Q + D GE ++S + K++N L+ + ++ + + D Sbjct: 157 QMPHNCSFICTDPKGEILRSCGQMLKNNGYNLKVINLLEMDKSDCYNPFSYIREETDVVK 216 Query: 263 TANTLIPMGTKE-----DPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIK-- 312 LI T + DPFW+ + Y + + R++ ++ L + Sbjct: 217 LITNLISNTTPKGATPSDPFWEKAEGLFLQAIFYYVWLEVQPAKRNFETVLKLLGEAEVT 276 Query: 313 --------------IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE 358 +E+ N PA + + ++R+++ + + +L+ + Sbjct: 277 EQGKASKLDVRMKFLEESSPLGANHPAVKQYNKCMRGAGDTVRSIIISANSRLAFLENKQ 336 Query: 359 H----NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 + + + D GV D + D+ S +I + + + L + Sbjct: 337 VLRLLSKDELNLSDIGIGVNGDGETKTALFCVIPDSDKSYNFIIGLLYTQIFQELYYQAD 396 Query: 415 -----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAA 469 V F DE + D +L R + IQ++AQL+ ++ + Sbjct: 397 FNCGGRLPIHVTFMLDEFANVALPDDYCSLLSTMRSREISSIIIIQNFAQLKALF-KDTW 455 Query: 470 ASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQ 529 ++ +T + ++ + +G+ K S + G S D+ + Sbjct: 456 ETIPGNCDTFIYLGGNEQSTHKYVSELLGKGTIDKKSSGETKGRQG---SSSRNYDVLGR 512 Query: 530 TLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVL 589 L + +++ L + C + + G P + P +++ Sbjct: 513 ELFTPDEVRKLDNKKCIIFIRGFDPIMDNKFIPFNHPMFNQT--ADGKGEPYVHQIRGAD 570 Query: 590 AAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQE 649 ++ ++ + + + D + ++ ++ Sbjct: 571 NLIGPPFEILSGKAVKYYEKLKDKGENVYIDSLTYEQFMMLGDAELSRRFSMQDEAEQKA 630 Query: 650 -LKMKPEEEMEQQLPPGISESGEVVDMAAYEAW-----QQENHPDIQQQMQRREEVNINV 703 + + E+E S++ E + + A E + ++ + Sbjct: 631 KIDREQANELEYVDESQKSDAAESANASNGSAGGKPVRNPEREKPKWEDTITNRMLHWSY 690 Query: 704 HRERGEDVEPG 714 E+ E++ Sbjct: 691 TPEQKEELRKA 701 >UniRef50_D0ZHL9 Type IV secretory pathway component n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZHL9_EDWTE Length = 645 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 83/617 (13%), Positives = 177/617 (28%), Gaps = 58/617 (9%) Query: 47 IKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSE 106 + +S ++ + + + S Y + Y + Sbjct: 3 LNLSDAKWLKIVLLLAVPIIAIVGWAWLSGYFYLELAGLDGRAATPWTLYQYWYYYGEDK 62 Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQ----GKQQSENEVTGGRQLTDNPKDVARM 162 S ++ + L++ + V+ R+ K + ++ D+ V + Sbjct: 63 ATQSWLTISGLGGLIVVCLPLLVIFSPAKRKLFGDAKWATTKDIAKAGLFADDGIIVGQK 122 Query: 163 LKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRS 222 G + Q+ + +GK + + VI D Sbjct: 123 TSFMGLSKRFLVYG-------GNQHALMSAPTRSGKGVSV--VIPTLLTWSGSTVILDLK 173 Query: 223 GE---FVKSYYDPSID--KILN--PLDARCAAWDLWKECLTQP-----DFDNTANTLIPM 270 E + +LN P + R W+ P D L P Sbjct: 174 QENWDITSGFRSAHGQDCYLLNLAPRNHRTHRWNPLYYISDDPAFRINDIQKIGQMLFPK 233 Query: 271 GTKEDPFWQGSGRTIFAEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLRN------ 322 E P WQ S R+++ + + + + L E+L + Sbjct: 234 IDNEAPIWQSSARSLWLGIVLYLIETDELPVTMGEALRQLTMGD-ERLAEIIEERQESDN 292 Query: 323 ------SPAANLVEEKIEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVRE 375 A + +KT S+R T ++ + F +RD Sbjct: 293 PLSRECYLALKEYLDTPDKTRGSVRKGFTAALELFYNPMIDAATAENDFDLRDL------ 346 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLH 431 +K ++++ D L P+I+++ I R L + DE + Sbjct: 347 RKKRMSVYVAITPDDLDRLAPLINLFFQQVIDQNTRELPEQNPELKYQCLLLPDEFTAMG 406 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 K+ L + + +G + IQS AQL ++YG A + + + F + K+A+ Sbjct: 407 KVGILSKSISYIAGYGLRMLPIIQSPAQLREVYGADATETFMENHALQIIFAPKNIKVAK 466 Query: 492 FAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG 551 + +G S + S + L+ +++ + + + + Sbjct: 467 EISETLGTTTVKNKSRTRQL---VGKASRSENASDHSRALLLPQEVKGIGEKAEILIMEN 523 Query: 552 PYPAVKLSLKYQTRPKVAPE----FIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV 607 P + + + +P+ S + + R+M L Sbjct: 524 TPPIRCEKVTWYKEKVFSERGNNLKALEQGDPDAIKWPSPEVPKLDPSSRKMGELDFRSN 583 Query: 608 PEVVSGEDVTQAEQPQQ 624 + V + Q Sbjct: 584 AVSEANRTVIERPVTAQ 600 >UniRef50_B1I2W3 TRAG family protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2W3_DESAP Length = 648 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 85/595 (14%), Positives = 185/595 (31%), Gaps = 71/595 (11%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 + + + + LV ++ + R + + + D Sbjct: 58 FQNPLLAAVTVPFQGTLPWWLGLNLVFGFFGYWYYLQLRARFPDTFNPRDEVD--FMRDP 115 Query: 156 PKDVARMLKKDGKDSDIRIG-------------DLPIIRDSEIQNFCLHGTVGAGKSEVI 202 +R L + + + G + + +N + G+ G+ K+ + Sbjct: 116 SCGTSRWLDRRNAEKVLSFGHGPGFLFGTMEGDPVRLHGSDLNRNVIVFGSPGSRKTRSL 175 Query: 203 RRLANYARQR---GDMVVIYDRSGEFVKSY--YDPSIDKILNPLDA----RCAAWDLWKE 253 + Q G+ VI D GE ++ Y S + +N + R W+ E Sbjct: 176 --VIPNILQAVVSGESCVITDPKGEILRYTLGYLQSRNYNVNVFNLVEMHRSDRWNPLAE 233 Query: 254 CLTQPDFDNTANTLIPMGT-------KEDPFWQGSGRTIFAEAAYLMRND---PNRSYSK 303 T D + +I DPFW + + + A + N+ R+ Sbjct: 234 IQTGLDAQLFSEVVIANTAVPGIRKMGGDPFWTRAEQNLLKALALYVVNEMPPEQRNLES 293 Query: 304 LVDTLLSIKIEKLR----TYLRNSPA---ANLVEEKIEKTAISIRAVLTNYVKAIRYLQG 356 L L +++L + + PA N+ + + L ++ ++ + Sbjct: 294 LYAVLSCGSLDRLDITFGSLAPDHPAKAPYNVFSHADKPVKGGVIIGLGTRLQVVQNPEV 353 Query: 357 IEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR 416 + D ++ + +DT + + S++ + L + +++ Sbjct: 354 ----KRLTSTSDIDLRAPGLERCA--YFGIVSDTDTTFDFLASLFFTFLFIKLTRLADSK 407 Query: 417 NRR----VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 V F DE + +PD + + R G V QS AQL++ Y + + Sbjct: 408 GGPCPVRVNFILDEFCNIGSIPDFKKRIATVRSRGLNCVLITQSVAQLKNRYPDDEWQEI 467 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 ++R F + A++ + +G + S Q+ D V G + L+ Sbjct: 468 ISCCDSRLLFGANEPMTAKYFSDLLGVGTVNRVSRQH---KVTALDPVKLGHAPSPRNLL 524 Query: 533 SYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK---------------VAPEFIPRDI 577 + +I L + L PA+ L + P+ Sbjct: 525 NLDEILRLNREKAVLCLASFPPAMIEKLDFTGYPEGGSLPDAADLGGVVYRPAHLDETPP 584 Query: 578 NPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIND 632 +E +V + G+ +P+ ++ + P P + D Sbjct: 585 EVIVEYSGCSVPRTEKLNGKTKKKKDDPEDGAELAEDPFDPFRDPFAPELDSEED 639 >UniRef50_A3T2K0 Type IV secretion system coupling protein n=6 Tax=Rhodobacterales RepID=A3T2K0_9RHOB Length = 646 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 94/659 (14%), Positives = 182/659 (27%), Gaps = 42/659 (6%) Query: 43 LVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMI 102 L LW + I + L +++ K + Sbjct: 5 LPLWAAVPIGAVCGAVIGTIIASFYLTLALKVGFSNFDMLAVWKAGEATK---------L 55 Query: 103 WCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARM 162 E AF + + +W R+ + +L N Sbjct: 56 AHPEAFKVAF---GAIGFGAIGLGVLAFAWTFQRERSEYGTAHWQSKAELKKNDMLQDAG 112 Query: 163 LKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRS 222 P I + I + + AGK + VV+ D Sbjct: 113 RGFVCGKIGKPNSKGPFISSTVIPHVMMVAPTRAGKGVGF--VIPNLLGFAGSVVVLDVK 170 Query: 223 GEFVK-----SYYDPSIDKILNPLD--ARCAAWDLWKECLTQPDFDN-------TANTLI 268 GE + +P D ++ P F A+ + Sbjct: 171 GENFDKTSRLRALNGDEVYRFSPFDWSNATHCYNPLIRIAKAPSFAQRFTEVSILADLFL 230 Query: 269 PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLR-TYLRNSPAAN 327 K + +G++IF A L + ++ + + + Sbjct: 231 DKDNKTLDTFSEAGKSIFVAACLLAIQRGRATLGEVNRIVAGGDYKNAQYKAYAEEAEEP 290 Query: 328 LVEEKIEKTAISIRAVLTNYVKAIRY---LQGIEHNGEPFTIRDWMRGVREDQKNGWLFI 384 +V E A + +LT+ ++A+ Q T R + +K L+I Sbjct: 291 VVRELWTNAASASSRLLTSNIQALMTAGLKQWDNPAVRAATRRSDIDFSIFRKKPQSLYI 350 Query: 385 SSNADTHASLKPVISMWLSIAIR--GLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPE 442 + D A+L P++ + + I L GE+ V DE + +P L + Sbjct: 351 VVSEDHIATLAPLLRLLFADLIASLRLNEPGEDEPWPVMIMIDEFQQMGAMPYLERAIHS 410 Query: 443 ARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 +GG QS A L+ IYG + SL + + + + + +G Sbjct: 411 LASYGGRVAMIAQSLASLDRIYGPEGRESLENGAGLKLYITPRDQRTVREVSAAVGSTTR 470 Query: 503 LKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 + Y V ST +E + L+S ++ + + + +P +KY Sbjct: 471 EAVTRMYGRNKG-VLGATSTSSRLEERPLLSETEARLMDPDEVIILASPQHPIKAQRIKY 529 Query: 563 QTRPKVAPEFIPRDINPE-MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQ 621 P ++ + V E E +Q + E + Sbjct: 530 YDDPLFKELVEKQEGRAFPYPPNVEGVGPWEEVEPKQGKNDAAGGTSEQAKPASPPEDRN 589 Query: 622 PQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEA 680 + + + + + + PE E + E + +D E Sbjct: 590 ALREARAMMLGQDASGETEDLHPTPHPDEPLPPEWE------DVLLEQSDFLDALMEEQ 642 >UniRef50_B2T050 TRAG family protein n=12 Tax=Burkholderia RepID=B2T050_BURPP Length = 594 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 82/543 (15%), Positives = 158/543 (29%), Gaps = 63/543 (11%) Query: 178 PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSI 234 +R + Q L +GK I + D VV+ D E + Sbjct: 24 RYLRFAGQQFVLLAAPARSGKGVGI--VVPNLLSYPDSVVVLDIKQENFHLTAGFRRAHG 81 Query: 235 --DKILNPL--DARCAAWDLWKECL----TQPDFDNTANTLIPMGTKEDPFWQGSGRTIF 286 + NP D R ++ D L P+G D FW+ R +F Sbjct: 82 HDVYLFNPFAEDGRTHRYNPLSAISGGVFRVGDILAIGYALYPVG-GHDDFWKDQARNLF 140 Query: 287 AEAAYLMRNDPNR-------------SYSKLVD----------TLLSIKIEKLRTYLRNS 323 L+ + + +++ L + + R L + Sbjct: 141 LGIVLLLCEWRDARRAGNTDAPDCPVTMGEVLRQSSGNGMPVKAYLQQALLQNRRRLSGA 200 Query: 324 --PAANLVEEKIEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNG 380 A N +K SI A + + + F +RD ++ Sbjct: 201 CIDALNRFLANDDKVLASILATFNAPLTIFANPIVDAATSANDFDLRD------VRRRRM 254 Query: 381 WLFISSNADTHASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDL 436 +++ D ++++ S + + L + DE ++ K+ + Sbjct: 255 SVYVGITPDHLTEAALLVNLLFSQLVNLNTKELPQDNPALKIQCLLLMDEFTSVGKIHII 314 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 + + + +QS +QLE +YG A + + + K A + Sbjct: 315 ARAVAYMAGYNLRLLSIVQSVSQLESVYGRADARTFVTNHAMQIIYAPREQKDANEYSEM 374 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAV 556 +G S S R G S +R+ L+ +++ L + L P + Sbjct: 375 LGTFTDRSRSVSRSNAIFGGRGGSSESFSEQRRPLLLPQELKELGREKEIILLENTKPIL 434 Query: 557 KLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE-------PDVPE 609 + Y P P M+ R Q + E P+ E Sbjct: 435 AERICYWRDPVFTSRLAAAPAIPAMDLVRFTAQVERRLRDLQPDDMDEAGVLHVSPEYLE 494 Query: 610 VVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISES 669 V+ D P++ + ++ V I + K ++L P + Sbjct: 495 VLQTWD------PRELPRHLNDISDEEAAAYVERHFILLGVPAKGVAVAARRLSPSDLDV 548 Query: 670 GEV 672 E+ Sbjct: 549 AEL 551 >UniRef50_O87219 TrsK protein (TraK) n=9 Tax=Lactobacillales RepID=O87219_9LACT Length = 530 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 70/513 (13%), Positives = 159/513 (30%), Gaps = 43/513 (8%) Query: 184 EIQNFCLHGTVGAGKSEVIRRLANYA-RQRGDMVVIYDRSGEFVKS-----YYDPSIDKI 237 +N + G G+ K++ + + + + +V+ D GE + + Sbjct: 22 PNRNVMVIGGSGSYKTQSV--VITNLFNETKNSIVVTDPKGELYEKTAGIKLAQGYEVHV 79 Query: 238 LNPLD-ARCAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIFAEAAYLMR 294 +N + A ++ + ++ A ++ + W + R + + Sbjct: 80 VNFANMAHSDRYNPFDYIERDIQAESVATKIVQSENAEGKKDVWFSTQRQLLKALILFVM 139 Query: 295 ND---PNRSYSKLVDTLL-----------SIKIEKLRTYLRNSPAANL-----VEEKIEK 335 + R+ + +++ L + ++ L L+ + A + ++ Sbjct: 140 KERSPEQRNLAGVINVLQTFDSEPINKDENSDLDNLFLALKITHPARIAYELGFKKAKGD 199 Query: 336 TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 SI + L + E +I D+ +K L++ + + Sbjct: 200 MKASIISSLLATISKFTD----EEVSNFTSISDF-HLQDIGRKKIVLYVIIPV-MDNTYE 253 Query: 396 PVISMWLSIAIRGLL----AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 I+++ S L + G + V F DE L K P E L R +G Sbjct: 254 SFINLFFSQMFDELYKLASSNGAKLPQEVDFILDEFVNLGKFPKYEEFLATCRGYGIGVT 313 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 Q+ QL+ +YG++ A S+ + + + A++ + +G+ + S Sbjct: 314 TICQTLTQLQSLYGKEKAESILGNHAVKICLNASNEATAKYFSELLGKSTVKVETGSEST 373 Query: 512 GADP-VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 S + L++ +I +PD + P A Sbjct: 374 SHSKETSTSKSDSYSYTSRQLMTPDEIIRMPDTQSLLIFTNQKPIKATKAFQFKLFPDAD 433 Query: 571 EFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI 630 + + N + + L + + V+ E+ + A+ Sbjct: 434 SKVKLEQNKYVGITSKSQLEKYNDLSVKWEEKLQSLKNITVTEEEEKDLQDNIDSDLEAM 493 Query: 631 NDK--KSDSGVNVPAGGIEQELKMKPEEEMEQQ 661 N++ D+ E E K EE Sbjct: 494 NNENSGVDNSTTETDKIAETEAKEVQAEEKNFD 526 >UniRef50_A6NYJ8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYJ8_9BACE Length = 680 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 91/700 (13%), Positives = 190/700 (27%), Gaps = 80/700 (11%) Query: 10 QGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGM 69 +G + M S+ L + + L IS T Sbjct: 7 RGRRQTKGVDAMKSKSVRAAGIVLAVILGVAALFYLGGLISQLTIGYQKW---------- 56 Query: 70 RDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFV 129 + G T + + W S S A++ + FV Sbjct: 57 -----------LADGGMTGKATMGTIYFSPLACWRSAMTGSGLKCTFFTAVLAGGLFAFV 105 Query: 130 VSWILGR-----QGKQQSENEVTGGRQLTDNPKDVARMLKKDG--KDSDIRIGD------ 176 T G + K++ +L+ G + I +G Sbjct: 106 RLQNRFGSNDYDPRNFTRSKRGTYGTSGWMSEKEMRSVLEVAGPERAKGIILGKTERGSV 165 Query: 177 LPIIRDSE-IQNFCLHGTVGAGKSE-VIRRLANYARQRGDMVVIYDRSGEFVKSYYD--- 231 + + D+ ++ + G G KS VIR + +RG+ VV+ D E + Sbjct: 166 ICLPEDTRLNKHIAVFGASGTMKSRGVIRPALFQSIRRGESVVVADPKSEMFADTAELFK 225 Query: 232 --PSIDKILNPLDAR-CAAWD-LWKECLTQPDFDNTANTLIPMGTK---EDPFWQGSGRT 284 + N L +W+ ++ + +I D FW Sbjct: 226 KHGYKVWVYNLLQPEYSDSWNCMFDLGGDTLMAQILTDVIISNTKGDEKGDHFWDNGESN 285 Query: 285 IFAEAAYLMRND-----PNRSYSKLVDTLLSIKIEKLRTYLRNSPAAN-------LVEEK 332 + + D R+ + + L ++L P + L + Sbjct: 286 LLKSLILYVDLDSTRTPEERNLAAVYQMLTQHTEKELTMLFDRLPIGHPAKGPYSLFSQA 345 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 + I L ++ ++ D K + I D ++ Sbjct: 346 SDTVRAGIVLGLGTRLQVLQSEAVRRITRS----SDIDLSEPGWSKCAYYIIL--DDQNS 399 Query: 393 SLKPVISMWLSIAIRGLLAMGE-----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 SL+ + +++ + L+ + V DE+ + + D L R Sbjct: 400 SLEFLSALFFAFLFIKLVRYADSTPEQRCKVPVNIILDEMNNIGTIKDFGRRLSTIRSRA 459 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK--- 504 + QS QL++ Y A L +T+ + AE+ + G+ Sbjct: 460 LQVIMCSQSLPQLQNRYPNNLWAELLGNADTQIMLGATDDVTAEYFSARSGDMTVEVNST 519 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 + + S V + + R+ +++ ++ LP+ + L G + Sbjct: 520 MTTRQSLALAQVIPQYRYTEGIGRRRVLTPDEVLRLPNDELLIILRGQKVLRAKKFDFTE 579 Query: 565 RPKVAP-------EFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVT 617 P + + + + A + + V + Sbjct: 580 HPYAKECERTSIQRYQTDPAPAQPPEPPAQSMPAEPDMDKPPGPAPAAAAKQPVKAKPPQ 639 Query: 618 QAEQPQQPVSPAINDKKSDSG-VNVPAGGIEQELKMKPEE 656 + P +P+ + S+ E P + Sbjct: 640 AKPKAPVPKTPSSGGQPSELPAKPAKRPKTLYESSRPPAD 679 >UniRef50_A4VV00 Type IV secretory pathway, VirD4 component n=20 Tax=Streptococcus RepID=A4VV00_STRSY Length = 605 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 90/600 (15%), Positives = 190/600 (31%), Gaps = 82/600 (13%) Query: 54 FVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWS-AF 112 + ++C L + D + + P E Y L + + LW AF Sbjct: 12 LLGLAFGYFCHRLTLLYDSLTNAPPMERFAY-----------LLGEGLNQVFNPLWLFAF 60 Query: 113 VLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD------ 166 +++A ++ ++T +V + K E E G + + + K Sbjct: 61 TQKSLLAFILGVLTMTLVYLYVSTGQKVYREGEEYGSARFGTSKEKRNFYSKNPFNDTIL 120 Query: 167 GKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV 226 +D + + + +N + G GAGK+ R + Q ++ D Sbjct: 121 ARDVRLTLLEKKKPLFDRNKNLIVIGGSGAGKT--FRFVKPNLIQLNCSNIVVDPKDHLA 178 Query: 227 KS-----YYDPSIDKILNPLDA-RCAAWDLWKECLTQPDFDNTANTLIPM----GTKEDP 276 + + K+L+ ++ ++ ++ T+ D + G++ DP Sbjct: 179 EKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRMLTVYFNNTRGSGSRSDP 238 Query: 277 FWQGSGRTIFAEAAYLMRNDPNRS---------------------YSKLVDTLLSIKIEK 315 FW + T+ A + + N KL+ L + Sbjct: 239 FWDEASMTLVRAIASYLVDFYNPPGSSKQEQEARRKRGRYPAFSEIGKLIKLLSKGDNQD 298 Query: 316 ---LRTYLRNSPAA-----------NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 L + + +KT S+ AV T I Sbjct: 299 KSVLEVLFEDYAKKYGHENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVI---- 354 Query: 362 EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE---NRNR 418 T RD M + +++ D + + + +++ S L + Sbjct: 355 -DLTQRDTMDLKTWGTQKTMVYLVI-PDNDTTFRFLSALFFSTVFSTLTRQADVDFKGQL 412 Query: 419 RVWF--FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG-EKAAASLFDV 475 + + DE + ++PD E R V +Q+ AQL+ +Y ++A ++ Sbjct: 413 PIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGN 472 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 ++ + + +F +G +G++ S S+G ST + L++ Sbjct: 473 CDSLLYLGGNDEETFKFMSGLLGKQTIDVRSTSRSFGQTG---SSSTSHQKIARDLMTAD 529 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAE 595 ++ ++ C V + G P + KY +++ E E E Sbjct: 530 EVGNMKRDECLVRIAGV-PVFRTK-KYFPLKHKNWKWLADKETDERWWHYHINPLTAEEE 587 >UniRef50_A4X0P9 TRAG family protein n=2 Tax=Rhodobacteraceae RepID=A4X0P9_RHOS5 Length = 713 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 76/500 (15%), Positives = 157/500 (31%), Gaps = 53/500 (10%) Query: 179 IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSI- 234 ++ ++ L+ +GK + + D V+ D E + Sbjct: 164 LLVYGGPEHMLLYAPTRSGKGVGV--VVPNLLNWPDSAVVLDIKKENWQLTAGFRKAGGQ 221 Query: 235 -DKILNPLDA--RCAAWDLWKECLT-----QPDFDNTANTLIPMGTKEDPFWQGSGRTIF 286 + +PLD R W+ D A+ IP+ +K DPF+ + +T F Sbjct: 222 EVFLFDPLDPEGRTHRWNPLASVRRGTAFQVEDLQRLADLFIPVASK-DPFFDRAAQTAF 280 Query: 287 AEAAYLMRNDPN--RSYSKLVDTLL---------SIKIEKLRTY-----LRNSPAANLVE 330 + P + +L L +I++ L+ N Sbjct: 281 VGVGGYLAETPELPFTLGELYRQLTLTPNFVRTFKARIDERAEAGRPLSLQTIATLNDFL 340 Query: 331 EKIEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNAD 389 K E T S+++ +T + L F D +K +++ + Sbjct: 341 SKSENTFESVKSTITANLGLFANPLLDRATAASDFDFADL------RRKRMTIYVGITPN 394 Query: 390 THASLKPVISMWLSIA----IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARK 445 L P+++++ ++ L RV DE + +LP + Sbjct: 395 NLGRLGPLLNLFFQSCVDANMQELPEHNPALKHRVLLCMDEFAAVGELPAFKRGIGYFAG 454 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 +G + +Q+ AQL DIYG A + D F K A + +G Sbjct: 455 YGLKVLTIVQTPAQLADIYGSDGAEAYMDNAGITVVFTPKGLKEARNLSERLGTYGAEAI 514 Query: 506 SEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ-- 563 S S R+ + +++ L+ ++ L + G P +++ Sbjct: 515 STSRSK-LLASRNPPTISVSEQKRALMMPQELLQLDQSGAIILAAGHPPIRAKKIRFYAE 573 Query: 564 ----TRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP----DVPEVVSGED 615 R ++ P IP + + + +++L + ++ + Sbjct: 574 EAFLERSRIPPPEIPASRADATADDVRRLRDENRRMREDLSALTDEVRRIAALKLAQAAN 633 Query: 616 VTQAEQPQQPVSPAINDKKS 635 V + + P++ K Sbjct: 634 VAAGQPAEVPMTDEEIAKPE 653 >UniRef50_B4SNC9 TRAG family protein n=17 Tax=Proteobacteria RepID=B4SNC9_STRM5 Length = 559 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 73/526 (13%), Positives = 161/526 (30%), Gaps = 60/526 (11%) Query: 98 DKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 +Y + + FV A + +V + G + + G Sbjct: 46 YQYFNALGQPQVAPFVGKIKWAGYLGFGLPLLVLLVTGLVLLLKKDKRSLHGDARFATSA 105 Query: 158 DVARMLKKDGKDSDIRIG--DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM 215 D+++ I +G ++R Q L +GK + + + G+ Sbjct: 106 DLSKHGMFKKTGQSIVVGSHGGKLVRLDGQQFVILAAPTRSGKGVGV--VIPNLLEYGES 163 Query: 216 VVIYDRS---GEFVKSYYDPSID--KILNPL--DARCAAWDLWKECLTQP-----DFDNT 263 +V+ D + + + NP D R W+ P D + Sbjct: 164 LVVLDIKQENFDLTSGWRASQGQEIYLFNPFAEDRRTHRWNPLSYVSDDPAFRVSDLMSI 223 Query: 264 ANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN-------------DPNRSYSKLVDTLLS 310 A L P G ++ FW R F + + + L S Sbjct: 224 AAMLYPDGAEDQKFWVSQARNAFMAFTLYLFENWDDERSSGFPGGSGTPTLGAVYR-LSS 282 Query: 311 IKIEKLRTYLRNSPAANLVEE-----------KIEKTAISIRAVLTNYVK-AIRYLQGIE 358 L+ YL+ + + + ++T SI + I + Sbjct: 283 GDGSDLKKYLKALSERSFLSSNARSAFANMLSQADETFASILGTFKEPLNAWINPVLDKA 342 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMGE 414 + F + D +K ++I + A + +I+++ S I + L Sbjct: 343 TSSNDFLLTD------VRKKKMTIYIGIQPNKLAESRLIINLFFSQLINLNTKELPKSNP 396 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 + + DE ++ K+ + + + + IQS +QL+ YG + + ++ Sbjct: 397 DLKYQCLLLMDEFTSIGKVEIIASAVSYMAGYNIRLLPIIQSMSQLDATYGREVSRTIIT 456 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 + + + A + +G K + ++ + ER+ L+ Sbjct: 457 NHALQILYAPREQQDANDYSDMLGYTTIRKKNVTHAREK-------THSFTEERRALMLP 509 Query: 535 SDIQSLPDLTCYVTLPG-PYPAVKLSLKYQTRPKVAPEFIPRDINP 579 +++++ G P+P ++Y +P+ P Sbjct: 510 QELKAMGPDKEVFLYEGIPHPVKCDKIRYYKDRYFTSRLLPKVDVP 555 >UniRef50_D1PK86 TraG family protein n=8 Tax=Firmicutes RepID=D1PK86_9FIRM Length = 609 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 81/613 (13%), Positives = 183/613 (29%), Gaps = 81/613 (13%) Query: 47 IKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSE 106 + + +N + + + + + +F L + Sbjct: 4 LNVKKLVLLNLPYFLLGLFATNLGEAWRLAVGADASAKMLSFFSTLPVALGSWWPSLHPL 63 Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD 166 L A+ +C ++ L + ++ + V G D+A + Sbjct: 64 DL----------AVGLCCGAGLRLAVYLHGKNAKKYRHNVEYGSARWGTHDDIAPYIDPV 113 Query: 167 GKDSDIRIGDLPI--------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI 218 +++ I + + + +N + G G+GK+ L Q V+ Sbjct: 114 FQNNVILTQTERLTMSSRPKNPKYARNKNVLVIGGSGSGKTRF--WLKPNLMQMHSSYVV 171 Query: 219 YDRSGEFV--------------------------KSYYDPSIDKILNPLD-ARCAAWDLW 251 D G + K Y+P K+LN ++ + ++ + Sbjct: 172 TDPKGTILVECGKMLQRGAPKLGKDGKPVKDKNGKVIYEPYQIKVLNTINFKKSMHYNPF 231 Query: 252 KECLTQPDFDNTANTLIPMGTK----EDPFWQGSGRTIFAEAAYLMRND---PNRSYSKL 304 ++ D TLI D FW + ++ + + +++S L Sbjct: 232 SYIHSEKDILKLVTTLIANTKGEGKAGDDFWVKAETLLYCALIGYIHYEAPVEEQNFSTL 291 Query: 305 VDTLLSIKI---------------EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVK 349 ++ + S+++ ++L+ N A + + +++L + Sbjct: 292 IEMINSMEVREDDEEFKNAVDLMFDELKEREPNHFAVRQYAKYKLAAGKTAKSILVSCGA 351 Query: 350 AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL 409 + E T D + + LF+ +DT S +ISM + L Sbjct: 352 RLAVFDIAEL--REVTAYDELELDTLGDRRTALFL-IMSDTDDSFNFLISMCYTQLFNLL 408 Query: 410 LAMGE-----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY 464 + V DE + ++P L +++ R +Q+ +QL+ IY Sbjct: 409 CEKADDVYGGRLPVHVRCLIDECANIGQIPKLEKLVATIRSREISACLVLQAQSQLKAIY 468 Query: 465 GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGK 524 + A ++ M++ F + A +G++ + S G + S Sbjct: 469 -KDNADTIIGNMDSSIFLGGKEPTTLKELAAVLGKETIDTYNTGESRGRE---TSHSLNY 524 Query: 525 DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENR 584 + L+S ++ + C + L G P + P N Sbjct: 525 QKLGKELMSQDELAVMDGGKCILQLRGVRPFLSDKYDITQHPNYKYTADADPKNAFSIED 584 Query: 585 LSAVLAAREAEGR 597 + Sbjct: 585 FLRARLKLKPNQV 597 >UniRef50_Q0ACY8 TRAG family protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0ACY8_NITEC Length = 639 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 76/585 (12%), Positives = 158/585 (27%), Gaps = 98/585 (16%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 + + AF++ + V ++I ++ F +V + R ++ ++ T + ++ Sbjct: 57 FYQGAPDTYNYAFIIFS-VGVLIGMVAFVIVVGVKSRSSRKHTDVHGTAHFASIEEIQET 115 Query: 160 ARMLKKDGKDSDIRIGDLPII--------RDSEIQNFCLHGTVGAGKSEVIRRLANYARQ 211 + K + + G R ++ C +GK + + Sbjct: 116 GLISKPGKRGQGVYCGAFDDPNGEKTYYLRHDGPEHICAIAPTRSGKGVGL--VIPTLLS 173 Query: 212 RGDMVVIYDRSGE---FVKSYYDPS---IDKILNPLDA-RCAAWDLWKECLTQP-----D 259 V + DR GE + + +P W+ E + D Sbjct: 174 WPHSVFVLDRKGENYAITAGWRREEAGNVILRFDPAQPGESCGWNPLNEIRYKTRFQVSD 233 Query: 260 FDNTANTLIPMGTKE--DPFWQGSGRTIFAEAAYLMRNDPN-----RSYSKLVDTLL--- 309 N A ++ K ++ + + + S S L Sbjct: 234 TQNIAYMVVDSDGKGIEGNHFRSAAYELLTGLILHSLYKSDGVGRFPSLSDCALMLTGVG 293 Query: 310 ---------------SIKIEKLRTYLRN--------------------SPAANLVEEKIE 334 + L + + + + Sbjct: 294 DFAAPDTQDNLAEDADGDPKALNSLFAEMRDVDFPVKDQIDREAKLVIAGVGRRMLDTPA 353 Query: 335 KTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 + SI + + R E + F+I D M + L+ + Sbjct: 354 RELGSIISTANTALSLYRDPIVGENTSRSDFSISDLMDH----DRPVSLYFITTPRNADR 409 Query: 394 LKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLVEILPEARK 445 ++P+ + L++ + L E + R+ DE PTL +L L Sbjct: 410 MRPLARLLLTLIVSSLADRMEFDNGRSKTSHKHRLLLMLDEFPTLGRLEIFESALAFIAG 469 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKA 505 +G Q QL Y S+ + R + + AE+ + G+ +K Sbjct: 470 YGMKAYIITQDVQQLYKAYT--NFESIISNCHVRVAYAPNKVETAEWMSKMAGQATVIKE 527 Query: 506 SEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDIQSLP------------DLTCYVTLPGP 552 S V + VS ++ L++ +I LP V + G Sbjct: 528 QVNESGKRFGMVLEQVSRSFQEVQRPLMTTDEIMQLPGPKKDSKDNIVEPGEMLVFVAGY 587 Query: 553 YPAVKLSLKYQTRPKVAPE--FIPRDINPEMENRLSAVLAAREAE 595 + Y P P ++N + Sbjct: 588 PVIRGRQILYFRDPVFRKRSEIEPPKYTDTVKNSQRITGNFPPKK 632 >UniRef50_Q0ACU1 TRAG family protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0ACU1_NITEC Length = 666 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 95/647 (14%), Positives = 185/647 (28%), Gaps = 58/647 (8%) Query: 45 LWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWC 104 ++ ++ + ++ I S V ++ + N + D Sbjct: 7 VFADMTPKKWIGVMIGLLSLGGLVYCAFWVSGMVLYASFHENPLKANIHTIF-DATASIE 65 Query: 105 SEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLK 164 + + + + V +CL F + R + GR D + Sbjct: 66 THRQKVKVIGSYFVGFFLCLAIPFGMIMAYRRH----DPDVYGKGRFANRKDIDNEGLFA 121 Query: 165 KDGKDSDIRIGDL-PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 + G DL + + L GK + + V+ D G Sbjct: 122 ERGICLGRFAQDLMHLP---GYEFVLLAAPTRTGKGVGF--VIPNLLTFRESTVVLDIKG 176 Query: 224 E---FVKSYYDPS---IDKILNPLDARCAAWDLWKECLTQP-----DFDNTANTLIPMGT 272 E ++ NP W+ P D A + Sbjct: 177 ENYNLTSAFRRKHLGNEIFYFNPFSETTHRWNPLSYVSENPLFRVNDLRALAAIIFKTPE 236 Query: 273 KEDPFWQGSGRTIFAEAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTYLRNSPAANL-- 328 + DPFW S R +F A L+ P + +++ S K + YLR A Sbjct: 237 RSDPFWSDSARNLFVAIALLVLETPRLPHTMGEILRQ-ASGKGKDTALYLREVIAVRQNT 295 Query: 329 --------------VEEKIEKTAISIRAVLTNYVKAIRYLQ-GIEHNGEPFTIRDWMRGV 373 + T +I + T+ + + + F +RD Sbjct: 296 AKPLSRECKDAINRFLNGSDDTLKNILSTFTSALGVFSSPVTDKATSADDFDLRDI---- 351 Query: 374 REDQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPT 429 ++ ++I +A + + +++ S I + L + DE Sbjct: 352 --RKRKMSIYIHISAGEVMQAQFITNLFFSQLINENVKELPEQNPALKYQCLLMMDEFTA 409 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 K+ L + + + IQ+ +QLE YG++ A S+ D M + F+ K Sbjct: 410 ARKIEILAKGVGFMAGYNMRLALVIQNNSQLESTYGKEDAHSIMDNMGVKIFYTPSQVKE 469 Query: 490 AEFAAGEIGEKEHLKASEQYSYGA--DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYV 547 AE + +G + S Q+S + R S + + L+ ++ L V Sbjct: 470 AEEYSKMLGNITAIAQSTQHSNIGPLNVGRYSKSETDTLVSRALMLPQELMQLDKEKELV 529 Query: 548 TLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEME----NRLSAVLAAREAEGRQMASLF 603 G ++Y F +++ ++ L R Sbjct: 530 HRSGIPIIFGNKIRYYEDDYFMRRFTAVEMHKVSIGGEVRKVPLPLPLPNTNWRLYRGQV 589 Query: 604 EPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL 650 + V S D VS ++ P ++ Sbjct: 590 QRSDYYVDSQLDDLAHPAETNSVSMLVDIVNMVEDDPNPQDAALRDA 636 >UniRef50_D1PJ06 TraG family protein n=41 Tax=Bacteria RepID=D1PJ06_9FIRM Length = 609 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 78/534 (14%), Positives = 169/534 (31%), Gaps = 78/534 (14%) Query: 101 MIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA 160 + + W + ++ + C + ++ + K+ + G +D+A Sbjct: 50 LPGALQSFWPSLHPLDLLVGLCCGAGLRLAVYLKSKNAKKYRHG-MEYGSARWGTSEDIA 108 Query: 161 RMLKKDGKDSDIRIGDLPI--------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 + +++ I + + + +N + G G+GK+ L Q Sbjct: 109 PYIDPVFQNNVILTKTESLTMNSRPKDPKTARNKNVLVIGGSGSGKTRF--WLKPNLMQM 166 Query: 213 GDMVVIYDRSGEFV--------------------------KSYYDPSIDKILNPLDAR-C 245 V+ D G + K Y+P K+LN ++ R Sbjct: 167 HSSYVVTDPKGTILVECGKMLQRGAPKLGKDGKPMKDKHGKVIYEPYRIKVLNTINFRKS 226 Query: 246 AAWDLWKECLTQPDFDNTANTLIPMGTK----EDPFWQGSGRTIFAEAAYLMRND---PN 298 ++ + ++ D TLI D FW + ++ + + Sbjct: 227 MHYNPFAYIHSEKDILKLVTTLIANTKGEGKAGDDFWVKAETLLYCALIGYIHYEAPVEE 286 Query: 299 RSYSKLVDTLLSIKIEKLRTYLRN---------------SPAANLVEEK---IEKTAISI 340 +++S L++ + ++++ + +N A ++ KTA SI Sbjct: 287 QNFSTLIEFINAMEVREDDEEFKNPVDLMFDALESEKPNHFAVRQYKKYKLAAGKTAKSI 346 Query: 341 RAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 + + E D + + LF+ +DT S +ISM Sbjct: 347 LISCGARLAVFDIAELREVTAY-----DELELDTLGDRKTALFL-IMSDTDDSFNFLISM 400 Query: 401 WLSIAIRGLLAMGE-----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 + L + V DE + ++P L +++ R +Q Sbjct: 401 CYTQLFNLLCEKADDVYGGRLPVHVRCLIDECANIGQIPKLEKLVATIRSREISACLVLQ 460 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 + +QL+ IY + A ++ M+T F + A +G++ + S G + Sbjct: 461 AQSQLKAIY-KDNADTIIGNMDTSIFLGGKEPTTLKELAAVLGKETIDTYNTGESRGRE- 518 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 S + L+S ++ + C + L G P + P Sbjct: 519 --TSHSLNYQKLGKELMSQDELAVMDGGKCILQLRGVRPFLSDKYDITRHPNFK 570 >UniRef50_Q5ZW42 LvhD4 n=6 Tax=Legionella RepID=Q5ZW42_LEGPH Length = 691 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 79/560 (14%), Positives = 171/560 (30%), Gaps = 49/560 (8%) Query: 37 FWILVGLVLWIKISWQTFVNGCIY-WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQV 95 I G+ + F+ Y + + + + + Y F + + Sbjct: 107 TAIASGITALLMSCVVGFLKQGFYRYLSFLISSILLGGMVVFLLGFELYSWIFLSSVQSL 166 Query: 96 ---LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQL 152 + ++ + +LW F+ + ++ + + + + + N Sbjct: 167 SGLMELAFLRYQEPELWHLFLTVEGIVFILTFLAIALYLFHWLKPNNKALGNAHFSNGFE 226 Query: 153 TDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 T R +D + P+ + ++ + G+GK+ I Sbjct: 227 TKKAGFFER---QDQSIVIGKKYGAPLYSN-GFEHVLVFAPTGSGKTRSIG--IPNLFNY 280 Query: 213 GDMVVIYDRSGEFVK--SYYDP----SIDKILNPLDAR--CAAWDLWKECLTQ-----PD 259 VV D + S Y P D ++ D Sbjct: 281 PYSVVCNDVKLTLFRTTSGYRERVLGHRCFCWAPADENRITHCYNPLSLISEDKIQRLTD 340 Query: 260 FDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR--SYSKLVDTLLSIKIEK-L 316 A+ L+P K DP WQ + R +F A + + P R + ++ + + L Sbjct: 341 IQRIAHILMPDNKKSDPIWQQASRKLFKVAVLYLLDTPERPTTLGEINRLVKQAGFDDWL 400 Query: 317 RTYLRNSP---------AANLVEEKIEKTAISIRAVLTNYVKAIRYL-QGIEHNGEPFTI 366 + L + + + EKT SI + Y + F + Sbjct: 401 ASVLEETNHLDPEFYRNGYSYLNNH-EKTRSSILETFSGYFELFDDPTIDAATARSDFDL 459 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA---MGENRNRRVWFF 423 R ++ ++I D L P+++++ I ++ + + Sbjct: 460 RQL------RREKITIYIGFTDDDMERLSPLLTLFWQQLISVMIKNIPDPVDEPYPLLCL 513 Query: 424 CDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR 483 DE +L ++ L L R++ V +Q AQ + Y A + F + T+ F Sbjct: 514 IDEFSSLGRIERLRRSLKLLREYRVRCVLIMQYIAQTYEQYTHDEAKA-FTNIKTKIAFA 572 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDL 543 + AE+ + +G + ++ S + S L+ ++ LP+ Sbjct: 573 TEDIFDAEYVSKLLGTRTVKVSAGSTSTQTQGYSESKSYNYQAI--PLLRPDEVMRLPED 630 Query: 544 TCYVTLPGPYPAVKLSLKYQ 563 + G P + + Sbjct: 631 QTLIMRTGHAPVKAEQMVWY 650 >UniRef50_C6M7A4 Protein VirD4 n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M7A4_NEISI Length = 683 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 91/655 (13%), Positives = 194/655 (29%), Gaps = 88/655 (13%) Query: 44 VLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIW 103 +L + T + +Y L + + + Y + F D+ Sbjct: 8 ILVSLLLAITTICVGLYLGAVVYSKWLGLKTAPSLSLLYAYWQHF---------DRLPQG 58 Query: 104 CSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSE---NEVTGGRQLTDNPKDVA 160 L + +AA + +V ++ V ++ S L DNP Sbjct: 59 MVFPLKVSTAVAAAIPVVGLIMLLISVLRGKRKELHGSSRFASEREIRKSGLLDNPSA-- 116 Query: 161 RMLKKDGKDSDIRIGDLP--IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI 218 + KK D+ +G +R S L +GK + +V+ Sbjct: 117 KKRKKGKDVPDLILGKYKGKYLRWSNDGFLYLAARTRSGKGIGF--VIPNCLHYRHSMVV 174 Query: 219 YDRSGE---FVKSYYDPSIDKIL--NP------------LDARCAAWDLWKECLTQP--- 258 D E + K+ NP W+ P Sbjct: 175 NDIKKENFLITAGFRAKHGQKVFFFNPSGTMPYHTEEPDAPLISHRWNPLTYVRRDPVYT 234 Query: 259 --DFDNTANTLIPMGTKEDP---FWQGSGRTIFAEAAYLMRNDPNR----------SYSK 303 D + A P+ + FWQ + + +F + + + Sbjct: 235 YKDALSVAAIFYPLKNDDKDGSNFWQEAAQKLFTGLLLYLIETEKERDLNLMQNMTTMTN 294 Query: 304 LVDTLLSIKIEKLRTYLRNSPAANLVE-----------------EKIEKTAISIRAVLTN 346 L + L+ ++ + + +K +K A S+ + + Sbjct: 295 LFRLTSPANGKTLKEWINDELELRAISSTASLSRNCVFLLRDFLQKADKEAASVLSTMNA 354 Query: 347 YVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI 406 + D R R + +++ + ++ ++ S Sbjct: 355 PLSIFLDPAVEAATSG-----DDFRLDRLRMEPTTIYLGVAPNELKIYSTLLKLFFSQLC 409 Query: 407 -----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE 461 +GL + + DE L +P + + + +G + Q+ +Q+E Sbjct: 410 DVNVQQGLPSDNPKLKYQCLLLLDEFTALGNIPAIEKGVGYLAGYGIRPILVFQTPSQVE 469 Query: 462 DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVS 521 ++YG A + F R F AE + IG + + + Sbjct: 470 EVYGSTARQTFFSNFAIRMIFAPREQNDAEELSKLIGFYTYKAK---GTSRSRGKSSSSG 526 Query: 522 TGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA-PEFIPRDINPE 580 +++ +++ +++ +P+ C +++ G + Y P + F+P PE Sbjct: 527 VSISDQKRAVMNPDELKVMPNSDCIISMAGMSAIYAEKIIYDEDPALKDRAFLPIPHVPE 586 Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKS 635 L+ + A++ + P+ E + D AE+ + V AI S Sbjct: 587 ----LNVHIEAKKPVEVSKPAYVSPEEMESFNWRDAVNAEELARSVLEAIIPAGS 637 >UniRef50_C5D068 TRAG family protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D068_VARPS Length = 651 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 89/538 (16%), Positives = 175/538 (32%), Gaps = 49/538 (9%) Query: 120 LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPI 179 L+ L+ + L + G + + L + R+G+ + Sbjct: 68 LIASLVGSQGLMLGLVGIAMLPRRRPLHGNARFASRREIARSGLLNEHGIILGRLGNRYL 127 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF---VKSYYDPSI-- 234 + Q L +GK + + +I D GE + Sbjct: 128 VLP-GQQGVALEAPPRSGKGVGV--VIPNLLNWPGSAIISDIKGENFMRTAGFRAAHGQQ 184 Query: 235 DKILNPLDAR--CAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFA 287 + +PL R A W+ P D L P DPFW S R++F Sbjct: 185 VHLFDPLSERERSARWNPLGYVSETPYRCIDDLQRIGTMLFPDPQAGDPFWTSSARSLFL 244 Query: 288 EAAYLMRNDPN--RSYSKLVDTLLSIKIEKLRTY--------------LRNSPAANLVE- 330 A + R+ +++ ++ E + + L +L + Sbjct: 245 GIALYLFETKGATRTLGEILRQGMASDAEGFQKHWKRVIDACERAGYPLSQEAVQSLYDV 304 Query: 331 -EKIEKTAISIRAVLTNYVK-AIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNA 388 + TA SIR T+ + + + + F +R + +++ N Sbjct: 305 IDLAPTTASSIRKTFTSRLDLWLNPMIDATTSANDFDLR------ALRKHPISIYVQINP 358 Query: 389 DTHASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 D A L+P+++++ AI R L +V DE P L ++P + + Sbjct: 359 DNIARLQPLLNLFFQQAIGLQTRELPENNPELRHQVLLMLDEFPALGRIPVIADSTAFLP 418 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 + V +QS +QL + YG + A S+ ++ R F ++ AE + E+G + Sbjct: 419 GYNVRAVIIVQSNSQLIEKYGIEGAKSIRKMLAARIVFPPKEYEDAEAISRELGTYTVRQ 478 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 + + + + L+ +++ L + G P + + Y Sbjct: 479 KNISR-PMWGGANKEPTVTISEQPRRLLLPQEVKELGPDRMILFYEGLRPVLAHRILYFR 537 Query: 565 RPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQP 622 F PR++ P + +L+ A A L + ++ A P Sbjct: 538 D----RLFAPRELPPPLVPKLNVDKPGGAATTVPAAMLDDRKDTSGTGPGSLSNATPP 591 >UniRef50_B9JPS9 TRAG protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPS9_AGRRK Length = 787 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 104/622 (16%), Positives = 205/622 (32%), Gaps = 62/622 (9%) Query: 44 VLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIW 103 V+ + Y W + L+ + G M A Q ++ Sbjct: 7 VVALVAGPIVGAGAAFYTWSASYAAGSYLMLKSSTMWKSFAGGDVLMPAKQ-----AWVY 61 Query: 104 CSEQLWSAFVLAAVVA-LVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARM 162 + + + A ++ L + + ++ + R + + + G + + Sbjct: 62 LGNPIVTKLISVATISTLALSAVVAVAITLAIKRPWQVRPPAD---GSRFATLKDLESAG 118 Query: 163 LKKDGKDSDIRIGDLPIIRD------SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV 216 L + +G R+ S +F ++G +GK + + V Sbjct: 119 LLGGAPGKSVLLGTFGKGRNAVDVRYSGDSHFFVNGPSRSGKGRGF--VMPNLLEYEGSV 176 Query: 217 VIYDRSGEFV-----KSYYDPSIDKILNPLDARCAAWDLWKECLTQP----DFDNTANTL 267 ++ D E + P A W+ P D N A TL Sbjct: 177 IVLDVKLENYTLTGPARMAMGQRCYVFAPGSAHSHRWNPLDFVRDWPERSTDLINLAATL 236 Query: 268 IPMGTKEDPFWQGSGRTIFAEAAYLMRN----DPNRSYSKLVDTLLSIKI---------- 313 +P+G KE+ +W+ + R + A A + + R+ ++ L + + Sbjct: 237 LPIGEKEEAYWKQTARGLLAGALGYVLESASMEGRRNLRSVLRLLSTGRPFSAVLQEIID 296 Query: 314 --EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWM 370 +L ++ S +L + E+ S +T + A L E +G F IR Sbjct: 297 NEPELDQFILGSFRQHLGRD--EEQRPSFEGHVTTALAAFNNLLIAEACSGSDFDIRSL- 353 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA--MGENRNRRVWFFCDELP 428 +K LFI++ +++P+I + + +L G + ++ DE Sbjct: 354 -----RRKPFSLFIAAPVSDFGTVEPIIRLLIQQIHDVMLRSLPGADEPHKILMMLDEFY 408 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 +LP++++ P +G Q+ QL++ YG++ +L M+ + Sbjct: 409 QFERLPEIIKRAPLVAGYGLTIALVAQNIPQLDERYGQQTRNALLGNMDVKLSIAVGDDA 468 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVT 548 A+ + +G K + G + ++ E L+ +Q L D + Sbjct: 469 TAKIVSDNLGRKYVEREGWGRQTGL--LFGKQASSGRFELVPLIDPGSVQRLDDSNTVLQ 526 Query: 549 LPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVP 608 + G Y A+ L + FI R E + L E + LF P P Sbjct: 527 VRGGYGAILNKLNFYGDI----RFIARRREVEGW---KSELVIPEIRIQTEWPLFAPQPP 579 Query: 609 EVVSGEDVTQAEQPQQPVSPAI 630 E+ Q EQ Q Sbjct: 580 ELAVELPAVQDEQRQSSDIDHE 601 >UniRef50_Q17U09 TraJ n=11 Tax=root RepID=Q17U09_ECOLX Length = 509 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 128/525 (24%), Positives = 228/525 (43%), Gaps = 32/525 (6%) Query: 52 QTFVNGCIYWWCTTLEGMR-DLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWS 110 G + + TL + + ++ Y I + + ++ + + +W LWS Sbjct: 2 DDRERGLAFLFAITLPPVMVWFLVAKFTYGIDPSTAKYLIPY--LVKNTFSLW---PLWS 56 Query: 111 AFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDS 170 A + + + LI F + R K + ++ G +L + ++ + Sbjct: 57 ALIAGWFIGVG-GLIAFIIYDK--SRVFKGERFKKIYRGTELVRARTLADK--TRERGVN 111 Query: 171 DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY 230 + + ++PI +E +F + GT G GK+ + L + RG + D +G F+K++Y Sbjct: 112 QLTVANIPIPTYAENLHFSIAGTTGTGKTTIFNELLFKSIIRGGKNIALDPNGGFLKNFY 171 Query: 231 DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED-PFWQGSGRTIFAEA 289 P D ILN D R W + E D++ N+++ W G GR IF+E Sbjct: 172 RPG-DVILNAYDKRTEGWVFFNEIRRSYDYERLVNSIVQESPDMATEEWFGYGRLIFSEV 230 Query: 290 AYLMRN-DPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYV 348 + + + + +++ ++ +KL+ +L +PA + EK S R VL+ + Sbjct: 231 SKKLHSLYSTVTMEEVIHWACNVDQKKLKEFLMGTPAEAIFS-GSEKAVGSARFVLSKNL 289 Query: 349 KAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRG 408 ++ F++RDW+ D K G LFI+ + SL P+IS WL Sbjct: 290 AP-----HLKMPEGNFSLRDWLD----DGKPGTLFITWQEEMKRSLNPLISCWLDSIFSI 340 Query: 409 LLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 +L MGE +R + F DEL +L LP+L + L + RK G C G Q+Y+QL +YG Sbjct: 341 VLGMGEKESR-INVFIDELESLQFLPNLNDALTKGRKSGLCVYAGYQTYSQLVKVYGRDM 399 Query: 469 AASLFDVMNTRAFFRSP--SHKIAEFAAGEIGEKE-HLKASEQYSYGADPVRDGVSTGKD 525 A ++ M + + + + +GE E ++ E VR +D Sbjct: 400 AQTILANMRSNIVLGGSRLGDETLDQMSRSLGEIEGEVERKESDPQKPWIVRKR----RD 455 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 ++ V+ ++I LP+LT Y+ LPG P K K+ + P Sbjct: 456 VKVVRAVTPTEISMLPNLTGYLALPGDMPVAKFKAKHVKYHRKNP 500 >UniRef50_D0UIQ5 Conjugal transfer protein TraG/VirD4 n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=D0UIQ5_AGGAD Length = 633 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 81/660 (12%), Positives = 194/660 (29%), Gaps = 98/660 (14%) Query: 24 QIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQY 83 Q I ++ + F I V + NG ++ ++ IQ+ Sbjct: 8 QKTAIKVFIPIVVFGIYALSVCVLIAMLSDLGNGNVF--------------TKLNNAIQF 53 Query: 84 YGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSE 143 + + + +LA ++ + + F + KQ + Sbjct: 54 IQSRYSLTL-------PFKAIGQGFILEPILAFLMTTIFLVFVGFALHIG----AKQAKK 102 Query: 144 NEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL-PIIRDSEIQNFCLHGTVGAGKSEVI 202 G+ ++ + +D K + + + Q + +GK I Sbjct: 103 QREIFGKAEWSGEAEIRKNGLRDTKGIIVGKDNKGKFLIFGGQQFASVGAPTRSGKGVGI 162 Query: 203 RRLANYARQRGDMVVIYDRSGE---FVKSYYDPS---IDKILNPLDARCAAWDLWKECL- 255 + + +++ D E Y + + +P ++ + Sbjct: 163 --VIPNLLTWENSLIVLDVKQECFSITSKYREQGLGQKVFLFDPFSFNTHRYNPLEYLDF 220 Query: 256 ----TQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSI 311 + AN+L P G F+ + +F YLM TL S+ Sbjct: 221 NAPDIELQIQGLANSLYPAGKGGKDFFILQAQAVFVSCVYLMGKLNQIDLLGSSFTLTSL 280 Query: 312 ------------------------------KIEKLRTYLRNSPAANLVE----EKIEKTA 337 + K L ++ A + + + Sbjct: 281 AGALQGIKVQMWDSEKERFVVNTYPLQETVETAKRMGLLSDTIYAKFLSFFDQMEAKDQF 340 Query: 338 ISIRAVLTNYVKAIRYLQ-GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 ++A +K + + + F RD ++ ++I + ++ +P Sbjct: 341 TGVKASFETPLKVFQDPLFEMATSTNDFDFRDL------RKEKITIYIGITPENISTARP 394 Query: 397 VISMWLSIAIRGLLAMG-----ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 ++++ S I + G + + DE ++ + + + + Sbjct: 395 ILNLMFSQLIYENIRQGLPDTNPDLKHGILMLMDEFTSIGFMEQYQVAIAYMAGYNIRSL 454 Query: 452 FGIQSYAQLEDI----YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 Q+ QL + YG+K + +L + + +R + K AE + IG + ++ Sbjct: 455 IIYQNQTQLAENPPLGYGDKGSQTLLENHSCNIIYRPKNPKTAEEISKRIGNITIINKNK 514 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 ++ G G ST + ++ LV +I L D + + P Sbjct: 515 SHNKG------GTSTSDNTTQRALVLPQEIMDLKDDEEIIFC-NSAKIKCKKAFFYNDPF 567 Query: 568 VAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 + ++P +++ + + + + ++P Q E+ Q Sbjct: 568 FIDRL--KLVSPSLKDLGDKIPTKEQLDNAYQRKECQIELPNQYEAYQAQQREKAQMEAE 625 >UniRef50_C9LC04 ATPase n=12 Tax=Bacteria RepID=C9LC04_RUMHA Length = 668 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 83/599 (13%), Positives = 187/599 (31%), Gaps = 67/599 (11%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVT-------GGRQLTDNPKDV 159 + ++ L+TF ++ R G+ + G P ++ Sbjct: 65 DFPYNLYGIFLCLVLFGLLTFLLMRMGYDRNGEISDHDRNLNYSTKGTYGTSGFMTPDEM 124 Query: 160 ARML------KKDGKDSDIRIGD--LPIIRDSE-IQNFCLHGTVGAGKSEVI-RRLANYA 209 ++L KK+ ++ + + + +N ++G G+ KS R + Sbjct: 125 MKVLELTGDVKKNKGTILGKLNGKAVCLPYKTRMNKNIAVYGASGSMKSRAFARNMIFQC 184 Query: 210 RQRG--------DMVVIYDRSGEFVKSY----YDPSIDK----ILNPLDARCAAWDLWKE 253 RG + ++I D E +S + ++NP +W+ E Sbjct: 185 VARGQEGNNASGESLIITDPKSELYESMSAYLENEGYVVKAFNLVNP--ENSDSWNCLGE 242 Query: 254 CL-TQPDFDNTANTLIPM--GTKEDPFWQGSGRTIFAEAAYLMRN---DPNRSYSKLVDT 307 + A+ +I K D FW + + + R+ ++ Sbjct: 243 INGQETMAQVFADVIIQNTGSGKGDHFWDNAEMNLLKALVLYVDQGFPPEARNIGQVYKL 302 Query: 308 LLSIKIEKLRTYLRNSPAAN-------LVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 L ++L + P ++ + ++ + + L ++ + Sbjct: 303 LTMSSEKELNSLFDLLPVSHPAKVPYCIYKQASDTVRSGVIIGLGARLQVFQNKLI---- 358 Query: 361 GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR- 419 + + + + QK + I+S+ D ++ + S++++ L+ + Sbjct: 359 RQITSYDEIDLTLPGKQKCAYFCITSDQD--STFDFLSSLFMTFIFIKLVRYADKYGEEG 416 Query: 420 -----VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 V DEL + +L + + R Q+ Q+++ Y + Sbjct: 417 KLPVAVHILADELANTGAILELNKKISVIRSRNLSISCIFQNLPQMQNRYPYNQWQEIIG 476 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDME---RQTL 531 +T+ F A F + G+ +SE + V D + + ++ L Sbjct: 477 NCDTQLFLGCTDEVTATFISNRSGDVTVGVSSEAKQLNSWRVSDYTPEYRQTKSIGKRKL 536 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAA 591 ++ +I LP T V L G Y P A + PR + E + Sbjct: 537 LTPDEILRLPLDTALVILRGQKVLKVEKYDYTLHPD-AKKLTPRKAS-EHIPEWRKNGSL 594 Query: 592 REAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDS-GVNVPAGGIEQE 649 E + R S S + ++P P + D ++ ++ Sbjct: 595 EETDYRPQPSFGSAKRKRRSSSASIA-KQKPHFTSEPVYQEPTPDDFMEDLLQENFIED 652 >UniRef50_C6RJZ5 Putative uncharacterized protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJZ5_ACIRA Length = 506 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 125/509 (24%), Positives = 215/509 (42%), Gaps = 47/509 (9%) Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITF---------FVVSWILGRQGKQ 140 + A VL K+ I EQ A + A + L +V++W + K Sbjct: 22 ITAWVVLLPKFFIIPQEQKVKAILYALPLTFKTPLYVLILLVVLVISWVIAWFYFQNNKT 81 Query: 141 QSENE----VTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGA 196 E V G QL P ++ + G IR +P+ +D + ++F L G G Sbjct: 82 PFAGERYVKVLRGLQLVS-PYKFKKLTTEKGYQ--IRFCGMPVPKDLKYKHFLLTGGTGQ 138 Query: 197 GKSEVIRRLANYA---RQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKE 253 GKS I + + +++ D +G + +Y D I NP DAR +W + E Sbjct: 139 GKSVSISDFLDSCVSDARSKTRLIVVDPNGSYTSLFYKKG-DVIFNPFDARSVSWSIINE 197 Query: 254 CLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSK----LVDTL 308 D + + TLIP + + RTI A + P+ S S +DTL Sbjct: 198 VRNPYDIETYSATLIPKSSDAKHENFNSMARTIIKSAMSKVLEMPDISKSAKAQLFLDTL 257 Query: 309 LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD 368 L+ ++LR +L +PA +L+ + ++R+++T Y+ + ++ F+ RD Sbjct: 258 LNSSDDQLRDFLMGTPAFSLLGNT--ELVGTLRSIITTYLTPHTH-----NSIGDFSFRD 310 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELP 428 +++ G +FI+ D +L+P++S + LL+ +N + V F DEL Sbjct: 311 YLKNGE-----GNIFITWREDQLTALQPLVSCITDVVCSSLLSDFDNYSDFV-FCLDELG 364 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP--S 486 +L++L L +L + RK + GIQS AQL IYG+K + +L ++ Sbjct: 365 SLNRLSYLEAVLTKGRKHRLIALAGIQSLAQLITIYGDKFSITLRGCFSSFGVCAVNAQD 424 Query: 487 HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCY 546 + G E L+ + +D S E++ +V +I SL L Y Sbjct: 425 TYTPQEYEKSFGAIEVLRKMKS------SHKDAKSE-LVKEKENVVKAEEISSLQPLHFY 477 Query: 547 VTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 + G YP + +KY++ KVA + Sbjct: 478 LKFSGHYPPTLVKMKYRSYAKVAASYQQN 506 >UniRef50_Q00184 Conjugal transfer protein traG n=32 Tax=root RepID=TRAG5_ECOLX Length = 637 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 85/585 (14%), Positives = 169/585 (28%), Gaps = 87/585 (14%) Query: 65 TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL 124 L+ Y + A + W Q + A + +++ Sbjct: 35 GLQAATQFFAHTFAYHATLGPNVGHVYAPWSILHWTYKW-YSQYPDEIMKAGSMGMLVST 93 Query: 125 ITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI---------- 174 + V+ NE G KD+ + + + I Sbjct: 94 VGLLGVAVAKVVTSNSSKANEYLHGSARWAEKKDIQAAGLLPRERNVLEIVTGKAAPTAT 153 Query: 175 -----------GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 G+ +R S ++ + +GK + + G VI D G Sbjct: 154 GVYVGGWQDKDGNFFYLRHSGPEHVLTYAPTRSGKGVGL--VVPTLLSWGASSVITDLKG 211 Query: 224 EFV------KSYYDPSIDKILNPLD-ARCAAWDLWKECL-----TQPDFDNTANTLI-PM 270 E + + + P + W+ E D N A ++ P Sbjct: 212 ELWALTAGWRQKHAKNKVLRFEPASTSGGVCWNPLDEIRLGTEYEVGDVQNLATLIVDPD 271 Query: 271 GTKEDPFWQGSGRTIFAEAA----YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSP-- 324 G D WQ + + Y ++D + VD +L+ + Sbjct: 272 GKGLDSHWQKTAFALLVGVILHALYKAKDDGGTATLPSVDAMLADPNRDIGELWMEMATY 331 Query: 325 -------------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWM 370 AA + ++ E+ A S+ + +Y+ R + + F I+ M Sbjct: 332 GHVDGQNHHAIGSAARDMMDRPEEEAGSVLSTAKSYLALYRDPVVARNVSRSDFRIKQLM 391 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWF 422 L+I + + A L+P++ + +++ +R L + + R+ Sbjct: 392 HE----DDPVSLYIVTQPNDKARLRPLVRVMVNMIVRLLADKMDFEGGRPVAHYKHRLLM 447 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI---YGEKAAASLFDVMNTR 479 DE P+L KL + E L +G Q QL+ YG S+ + + Sbjct: 448 MLDEFPSLGKLEIMQESLAFVAGYGIKCYLICQDINQLKSRETGYGHD--ESITSNCHVQ 505 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYS-YGADPVRDGVSTGKDMERQTLVSYSDIQ 538 + + AE + G+ +K S + VS ++ L++ + Sbjct: 506 NAYPPNRVETAEHLSRLTGQTTVVKEQITTSGRRTAAMLGQVSRTYQEVQRPLLTPDECL 565 Query: 539 SLP------------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 +P + + G Y P + Sbjct: 566 RMPGPKKNAQGEIEEAGDMVIYVAGYPAIYGKQPLYFKDPVFSAR 610 >UniRef50_A0P1U0 TRAG protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1U0_9RHOB Length = 621 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 67/559 (11%), Positives = 147/559 (26%), Gaps = 101/559 (18%) Query: 104 CSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARML 163 ++ + + + V S + + G +DV Sbjct: 50 FPPEILHPAYGGLASFVTLMFVGAIVASGARSETIFGGRKQKDIHGTARWAETRDVKESG 109 Query: 164 KKDGKDSDIRIGDLPI------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVV 217 +S + +G P+ +R ++ +GK + + + + Sbjct: 110 LLS--ESGVVVGGWPMRRGVKMLRHDGPEHVLAFAPTRSGKGVGL--VLPTLLSWEESAL 165 Query: 218 IYDRSGEFVK-----SYYDPSIDKILNPL-DARCAAWDLWKECL-----TQPDFDNTANT 266 + D GE +P D ++ E D N A Sbjct: 166 VLDIKGENYALTAGWRAAQGQRIFRFDPAADKGSVKYNPLAEIRFGTDHEIADCQNIAIM 225 Query: 267 LI-PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR------SYSKLVDTLLSIKIEK---- 315 +I P GT FW G A + + + + + + E Sbjct: 226 IIDPDGTGLKDFWMQEGYGWLCTAILHVLYRIKKSENRTATLADVRAFMSIGDDEDSKSI 285 Query: 316 ---------------------------LRTYLRNSPA---------------ANLVEEKI 333 L++ A + ++ Sbjct: 286 SQQAVAAAAKAAFGQKDGEPDDGEDDSFDRLLKDMERYEHGREVVNDEVRLGAARMRKRS 345 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 + + T+ + + + F I D M K L+I A Sbjct: 346 SNERSGVHSTGTSQLALYSDPIVARNISESDFRITDLM----NGDKPATLYIVIPPSDIA 401 Query: 393 SLKPVISMWLSIAIRGLLAMG--------ENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 L+P++ + L+ + L + ++ R+ DE ++ KL + + Sbjct: 402 RLRPLVRILLNQFLTRLTSHMAFEGGRSVKHYKHRMLLMLDEFTSVGKLEIFEKAIAFMA 461 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 +G +Q QL+ YG + S+ + R + + + A + G+ ++ Sbjct: 462 GYGLKAFVIVQDLTQLQKTYGRE--QSIVSNCHVRIAYAPNTMETARVLSDMAGKTTLVQ 519 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP------------DLTCYVTLPGP 552 S+ + S + L++ + SLP + + G Sbjct: 520 KKTSASHTTGKIGTNYSETLMEVARPLLTPDECMSLPGIQVGSSGKVTRAGDMLIFVAGR 579 Query: 553 YPAVKLSLKYQTRPKVAPE 571 + Y + Sbjct: 580 PAIYGRQVLYFQNEDLQAR 598 >UniRef50_A7VQG5 Putative uncharacterized protein n=12 Tax=Bacteria RepID=A7VQG5_9CLOT Length = 617 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 86/630 (13%), Positives = 190/630 (30%), Gaps = 71/630 (11%) Query: 36 FFWILVGLVLWI---KISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNA 92 FF L GL L++ +I + + WW L + + G Sbjct: 3 FFPGLRGLFLFLAKGRIFFDSISTRKTPWWVWLLP-----LPIVWWLALLTAGSWRAGTN 57 Query: 93 AQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQL 152 L + + + +V L++ + +++ + K + G Q Sbjct: 58 LVELLARLSEAMNSPFSLHWTEYSVQCLLLFTTGYGIIALTVVSNRKNRRRGTEHGSAQW 117 Query: 153 TDNPKDVARMLKKDGKDSDIRIG-----DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLAN 207 D + R K ++ + L + N + G GAGKS Sbjct: 118 GDVFQTAKRYRDKKNPKQNLILTQHFQMGLDGHKHKRNTNVLVIGGSGAGKSRS--YAIP 175 Query: 208 YARQRGD-MVVIYDRSGEFVKS-----YYDPSIDKILNPLDAR-CAAWDLWKECLTQPDF 260 A G+ + + D E ++ + ++ + L+ ++ D Sbjct: 176 NALNCGECSMAVCDPKSEILRKTGTALKANGFEVRVFDLLNPDASYCYNPLAYVRDDKDV 235 Query: 261 DNTANTLI-----PMGTKEDPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIK 312 TLI P DPFW S + + ++ ++++ +++ L + + Sbjct: 236 LRLIETLIQSTTPPGAQTSDPFWTKSETALLQALVLYLMHEAPKEEQNFAMVMEMLEAAE 295 Query: 313 IEK--------LRTYLRNSPA----------ANLVEEKIEKTAISIRAVLTNYVKAIRYL 354 + + L + + KT SI + + A Sbjct: 296 VREEDDEYESPLDILFSRLEMRNPESIAVRQYRIFKMGAGKTLKSILISVGVRLSAFNLP 355 Query: 355 QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 Q T D + +K LF D+ SL ++ M I+ L + + Sbjct: 356 QIAR-----LTYTDELLLEEMGEKKVALFCCI-PDSDKSLNYLVGMIFGQLIQTLYFVAD 409 Query: 415 NR-----NRRVWFFCDELPTLH-KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 + V DE P + + + L R + Q+ AQ++ ++ ++ Sbjct: 410 RKYKGRLPVPVHLLIDEAPNIALPTDNFLPWLSTMRSRNIFCSYIAQNMAQIKALF-KEQ 468 Query: 469 AASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMER 528 SL + + + + ++ + +G + + S G S Sbjct: 469 WESLVGLCDEFLYLGGNEKETHKYVSELMGRETLDTNTYGRSRGRSG---SFSVNDQQTG 525 Query: 529 QTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV-------APEFIPRDINPEM 581 + L++ +++ L + + + G P + P + AP + Sbjct: 526 RELLTPDEVRLLDNRKAILFVRGERPIMDDKYDLMRHPNIRLAEDGGAPPYDYTQAKDAA 585 Query: 582 ENRLSAVLAAREAEGRQMASLFEPDVPEVV 611 ++ + + E E + + Sbjct: 586 DDLDYSPEQYGDFELLDPEDFLEEKPRKKL 615 >UniRef50_C5F2H7 Conjugal transfer protein TraG n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F2H7_9HELI Length = 607 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 86/600 (14%), Positives = 162/600 (27%), Gaps = 96/600 (16%) Query: 53 TFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAF 112 +Y + I SQ + + + + L + WS Sbjct: 4 QTNQALVYTLGLIGIFLTFTIISQIATQYLAKSFNYSPSLGETLLYGFYNPFKWISWSYA 63 Query: 113 VLAAV------------VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA 160 + + C I F +V R+ K E G ++V Sbjct: 64 YYSFYPDFFKKFFMAMFAGVAFCFIVFILVKLAFLRKAKAI---ENLHGSAHWATLEEVK 120 Query: 161 RMLKKDGKDSDIRIGD------LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGD 214 D + IG L +R ++ L +GK + L G+ Sbjct: 121 ESGVFDKDK-GVYIGGFEHKKTLHYLRHDGPEHVMLFAPTRSGKGVSL--LLPTLLSWGE 177 Query: 215 MVVIYDRSGEFV------KSYYDPSIDKILNP--LDARCAAWDLWKECLTQP-----DFD 261 +I+D GE + Y + L+P LD +++ +E + D Sbjct: 178 SALIFDIKGELWALTAGWRQKYAKNKVLKLDPTCLDDSAVKFNILEEIRLETMHEVKDTQ 237 Query: 262 NTANTLI--------PMGTKEDPFWQGSGRTIFAEAAYLM-----RNDPNRSYSKLVDTL 308 N A LI +++ N + Sbjct: 238 NIAINLIFKGETPPTNPTQGSTSYFKSEAGNFLVSIILYALHLKKYRGENTPNLTDIYKF 297 Query: 309 LSIKIEKLRTYLRNSPA-----------------ANLVEEKIEKTAISIRAVLTNYVKAI 351 ++ + + L + ++ K + + + + Sbjct: 298 INDPNQSIDELLEEMVECDISTMDKNTQEIIQSISRSMKNKATQELSGVVGTASEALNLY 357 Query: 352 RYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 + F I+D M + L++ L+P ++ ++ R L Sbjct: 358 IDPILAKNTAKSDFKIKDLM----NYESPISLYLIIPPGQKDRLRPFFNLLINQIFRTLT 413 Query: 411 AMG---------ENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE 461 + ++ DEL KL L E L +G + IQ QL Sbjct: 414 DDSLNFKNGENIKRYKHKMLVLADELTMFGKLGVLEENLAYMAGYGMKFYGSIQDIQQLY 473 Query: 462 DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS-EQYSYGADPVRDGV 520 IYGEK ++ + R F + A+ + G +K S + V Sbjct: 474 SIYGEK--ETIISNCHIRIAFAPNKIETAKLLSEMGGITTIIKKSLTSSGKRTAVMLGNV 531 Query: 521 STGKDMERQTLVSYSDIQSLP------------DLTCYVTLPGPYPAVKLSLKYQTRPKV 568 S ++ L++ + LP + + G P + Y P Sbjct: 532 SETIQEVQRPLITADECMRLPSAKKDKDDKIIAPGDMLIFIAGQAPIYGKQILYFKDPAF 591 >UniRef50_A7FC77 Conjugal transfer protein TraG n=7 Tax=Gammaproteobacteria RepID=A7FC77_YERP3 Length = 645 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 83/585 (14%), Positives = 160/585 (27%), Gaps = 100/585 (17%) Query: 79 YEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWS-----AFVLAAVVALVICLITFFVVSWI 133 + + ++ + ++ + I+ W F A V ++ + I Sbjct: 43 FAYAFNYQSVLGSNLNQIYPPWAIYTWWDKWHDIYPTYFTTAGSVGTMVGAAGLIGCALI 102 Query: 134 LGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI------GDLPIIRDSEIQN 187 NE G KD+ + G L +R + ++ Sbjct: 103 KMISSHSSKANEHLHGSARYAEKKDILEAGLLGNNEGVYVGAWEDDKGKLHYLRHNGPEH 162 Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSY------YDPSIDKILNPL 241 + +GK + + VI D GE Y + P Sbjct: 163 ILTYAPTRSGKGVGL--VVPTLLSWPHSAVITDLKGELWAMTAGWRKEYAKNKTIRFEPA 220 Query: 242 DAR-CAAWDLWKECLTQP-----DFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAA---- 290 A W+ E D N + ++ P G + WQ + + + Sbjct: 221 TLNGSARWNPLDEIRIATEYEVGDVQNLSTLIVDPDGKGLNDHWQKTSQALIVGLILHAL 280 Query: 291 YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI---------------EK 335 Y + + + +D +LS + + V + + Sbjct: 281 YKAKEEGTPATLPYIDRMLSDPNKDIAELWMEMSQYGHVNGENHPVVGSSARDMMDRPDD 340 Query: 336 TAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASL 394 A S+ + +Y+ R + + F I+D M L+I + + A L Sbjct: 341 EAGSVLSSAKSYLSLYRDPVVARNVSSSDFCIKDLM----NHDDPVSLYIVTQPNDKARL 396 Query: 395 KPVISMWLSIAIRGLLAMGE--------------------------------NRNRRVWF 422 +P++ + ++ R L E R+ Sbjct: 397 RPLVRVMTNMIFRLLADKMEFERVQQKVPRWRQILAKFGFKQPALSYIRSKKTYKHRLLG 456 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI---YGEKAAASLFDVMNTR 479 DE P+L KL L E L +G Q QL+ YG ++ + + Sbjct: 457 MIDEFPSLGKLEILQESLAFVAGYGIKLYLICQDINQLKSRETGYGPD--ETITSNCHVQ 514 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYS-YGADPVRDGVSTGKDMERQTLVSYSDIQ 538 + + AE + G+ +K S A + VS ++ L++ + Sbjct: 515 NAYPPNRVETAEHLSKLTGQATVVKEQITTSGRRASAMLGQVSRTIQEVQRPLLTVDECL 574 Query: 539 SLP------------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 +P V + G Y P Sbjct: 575 RMPGPKKDAEGQITDAGDMVVYVAGYPTIYGKQPLYFKDPIFTAR 619 >UniRef50_A5ZXL8 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A5ZXL8_9FIRM Length = 577 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 86/528 (16%), Positives = 173/528 (32%), Gaps = 40/528 (7%) Query: 149 GRQLTDNPKDVARMLKKDGKDSDIRIGD-------LPIIRDSE-IQNFCLHGTVGAGKSE 200 G T K++ + + + I G L + DS +N + G+ G+ KS Sbjct: 41 GFMGTQEQKEILQADRGMEQIKGIIFGRELSNGNILSLPVDSRLNRNIAVCGSQGSMKSR 100 Query: 201 VIRRLAN-YARQRGDMVVIYDRSGEFVKSY----YDPSIDKI-LNPLDA-RCAAWDLWKE 253 R+ +RG+ + I D E + + LN + AW+ E Sbjct: 101 AFARVMALQCVRRGESMYITDPKSELYEDLCAYLKEEGYVVKQLNLIQLTHSDAWNCLAE 160 Query: 254 CLTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLL 309 D + +I K D F+ + + + +++ + LL Sbjct: 161 IEDGELIDVFCDVVIRNTTDKFDHFYDNVEMDLLKALCLYVFEEYPQEQKTFPEAYKLLL 220 Query: 310 SIKIEKLRTYLRNSPAANLVEE------KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP 363 + +E L + P + + K EK + L ++ ++ + + Sbjct: 221 NKSVEMLDSIFERLPTDHPAKGPYQLFSKAEKVKGNAVLGLGTRLQILQN----KMVQQI 276 Query: 364 FTIRDWMRGVREDQKNGWLFISSNAD-THASLKPVISMWLSIAIRGLLAMGENR--NRRV 420 + D + QK + I+S+ D T+ L + + +LSI + L E R V Sbjct: 277 TSHTDIDLSLPGKQKCAYFCITSDQDSTYDMLATLFTSFLSIKLVRLADRTEERVLPVPV 336 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 F DE P + +PD + L AR Q+ QL++ Y + + + Sbjct: 337 SFILDEFPNIGVVPDFKKKLATARSRRIGMSILFQNIPQLQNRYPDNQWEEILGGCDFSI 396 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV---STGKDMERQTLVSYSDI 537 F A + + GE AS + ++ D V S + + ++ L+ +I Sbjct: 397 FLGCNDMTTATYYSDRTGEITVSVASIRKNFFTIRATDYVPEYSESRSIGKRQLLLPDEI 456 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGR 597 P + + G + Y + + + + ++ E + Sbjct: 457 LRYPLDQGILIIRGHNVLRFKKMDYTEHADAGKLKMEKVV--DHIPNWYRKWEKQQQEFQ 514 Query: 598 QMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGG 645 + + E+ + Q+P+ + N G Sbjct: 515 ILDEQVYEASDPLEKNENPIKENDVQEPL---TVNGAVQKPKNKKRTG 559 >UniRef50_C9M9B4 Conjugal transfer protein TraG n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9B4_9BACT Length = 652 Score = 262 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 92/656 (14%), Positives = 187/656 (28%), Gaps = 104/656 (15%) Query: 35 IFFWILVGLVLWIKISWQTFVNGCIY--WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNA 92 + + V L L IS ++ I W +R + P + ++ + Sbjct: 23 LLGALSVLLFLGTMISTTQYMAWNIGHNRWSGHFYTLRGVRLYPPWAFVDWF-----ITI 77 Query: 93 AQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQG--KQQSENEVTGGR 150 + AL + S G + +++ Sbjct: 78 RKSFDTTRYRGVRPAASMLLAGMGFSALCCLTALYLKSSRYSTLHGSARFADLDDIKSAG 137 Query: 151 QLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR 210 L V + + +R + ++ +GK + + Sbjct: 138 LLVKTGVYVGGWMNGKEQI---------YLRHNGKEHIIAFAPTRSGKGVGL--VIPTLV 186 Query: 211 QRGDMVVIYDRSGE---FVKSYYDPSIDKIL--NPLD---ARCAAWDLWKECL-----TQ 257 V+ D GE + + ++ +P D R ++ + Sbjct: 187 GWDQSAVVLDIKGENWALTSGWRKQNGQYVMRWDPTDTVEGRSVRYNPLEAIRIRTKDEV 246 Query: 258 PDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAY---LMRNDPNR--SYSKLVDTLLSI 311 D N A L+ P G FW + A M R + +++ L + Sbjct: 247 ADVQNVATLLVDPNGEGIKTFWDIEACNLLTGAILHVLYMARSEGRVGTLGEVLQALTTT 306 Query: 312 ----------------KIEKLRTY----------------LRNSPAANLVEEKIEKTAIS 339 + + Y + + AA + E TA S Sbjct: 307 GCTDAASIVNPWLSFKHLSENDEYKFINAQGEEIPDRTHPVVKTVAAGIFAAPAE-TAGS 365 Query: 340 IRAVLTNYVKAIRYLQGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 I T+ + + +++ F I D M K L+I N L+P+I Sbjct: 366 ILKTATSKLDLYKDPTVVKNTAHSDFKIEDLMDAN----KPVSLYIVLNPKELGRLRPLI 421 Query: 399 SMWLSIAIRGLL--------AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 ++LS + L+ +M ++ DE P+L L + L + Sbjct: 422 RIFLSQLLFTLMPEMKFKDGSMKPPFKHKLLLLLDEFPSLGNLGIFEQALAYMGGWNIKC 481 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 Q QL YG++ ++ + + AE+ + G + +E S Sbjct: 482 YLICQDTDQLSKAYGKE--ETITSNCHVTIAYAPNKVPTAEYLSKRTGVMTVVGTNESVS 539 Query: 511 YGADP--VRDGVSTGKDMERQTLVSYSDIQSLP-----------DLTCYVTLPGPYPAVK 557 Y + VS ++ +++ ++ +LP + G P Sbjct: 540 YSGSGLFSKKSVSKSIQETQRPVMTVDEVMTLPGALKDGENIVSPGDMLIFAAGFPPVYG 599 Query: 558 LSLKYQTRPKVAPE-FIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVS 612 + + ++ IP P ++L +E + + A + E S Sbjct: 600 KQILFFRDSYMSDATKIP---APSQSDKLKTEPDGKEEKNKTQAKPEKETSSEEKS 652 >UniRef50_A4IU07 TrsK n=4 Tax=Geobacillus RepID=A4IU07_GEOTN Length = 711 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 100/718 (13%), Positives = 225/718 (31%), Gaps = 82/718 (11%) Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 + + + + ++ + G + + ++ E L + F LA V L Sbjct: 12 FASVVLTVIAAYVLMGLFYMIGNGGDLKEILLRPKELITFVYTEENLKTVFSLAPFVILA 71 Query: 122 ICLITF----------FVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD 171 L TF + + L + + +EV G+ + N + + Sbjct: 72 ALLYTFRSSIIVPKLEYASDFGLHGTSRWGTPDEVIDGKMFSKNNSYTKDPVDAFQMEKG 131 Query: 172 IRIGDLP-------IIRDS--EIQNFCLHGTVGAGKS----------EVIRRLANYARQR 212 I +G +P I R++ + +N + V + N Sbjct: 132 IIVGKVPKKRELLIIPRNTTIDNRNVLVI--------GSSGSGKGQSFVFPNMIN---HT 180 Query: 213 GDMVVIYDRSGEFVKSYYD-----PSIDKILNPLDA-RCAAWDLWKECLTQPDFDNTANT 266 + +++ D GE ++ + ++ ++ C ++ D ANT Sbjct: 181 EETIIVTDPKGEIYEATHQIKRDQGYKVYQVDFINFVNCDRYNPLDYVEDDEDARAIANT 240 Query: 267 LIPMG--TKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEK--LRTYL 320 + + FW S + ++ + +V+ + ++ L + Sbjct: 241 IASNSVDEGKRDFWSESAVAFLSAFILYVKEKYKDKANMRHVVEMVARAGKDEEYLDEII 300 Query: 321 RN----SPAANLV---EEKIEKTAISIRAVLTNYVKAIRYLQGI-EHNGEPFTIRDWMRG 372 +N PA ++ T I A L + + F D Sbjct: 301 KNMSPDHPAYHMFTLANMSSGNTRAGIMATLAQQISIFAMQKIAKMTAKSDFKFHDL--- 357 Query: 373 VREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR----RVWFFCDELP 428 ++ L+I D + + + I L + + + F DE Sbjct: 358 ---QKEKSVLYIKIRMDE-NPFVQLTATFFEQLIAVLYDIADKNHSKLPIPTIFLLDEFA 413 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE--DIYGEKAAASLFDVMNTRAFFRSPS 486 + + +L R G + IQ QLE YG + A S+ + +T+ F R+ Sbjct: 414 NIGTINKYPRVLATCRGLGMAMMTIIQDIGQLEDKKRYGPEMARSIINNHDTQLFLRTKD 473 Query: 487 HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCY 546 K A++ + GE + SYG S + +++L++ ++ ++ TCY Sbjct: 474 TKTAKYFSELAGETTVKHKQKSASYGRKE--GSKSISEQYVKRSLITPGELMNMDKNTCY 531 Query: 547 VTLPGPYPAVKLSL----KYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASL 602 + + G YP Y ++ R V ++ + + + Sbjct: 532 LFVSGAYPMKLEKAWQFDIYGDLLSNYEKYRSRLGYTAPLWNGEWVWDEEDSAAQDIQEV 591 Query: 603 FEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQL 662 + V + E + + + + ++ + E E + Sbjct: 592 KQELEESDVVLLNEMIDEINKIDEEEEDEEITEEELRVLLGNVEDENEDEENESEEVGEA 651 Query: 663 PPGISESGEVVDM-AAYEAWQQE-NHPDIQQQMQRREEVNINVHRERGEDVEP-GDDF 717 S E+ + A++ + E D+ + ++ E + + E+ E + D+ Sbjct: 652 EELQSILDEIEEELDAFDEMEDEITEEDLMEIIEEFSEFSDDSEGEQEESNQKIADEL 709 >UniRef50_C9D4W2 Trag family protein n=2 Tax=Silicibacter sp. TrichCH4B RepID=C9D4W2_9RHOB Length = 1045 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 83/665 (12%), Positives = 192/665 (28%), Gaps = 68/665 (10%) Query: 25 IANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYY 84 + + + F ++ G V+ ++ ++ L+ +++ Sbjct: 1 MTKTLPLWAALLFGVICGAVIGTIVAA--------FYLTLALKTGFASFDMLTLWKASAA 52 Query: 85 GKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN 144 + E F + ++ + + ++ Sbjct: 53 TR---------------AGHPEAFKVGFGAVGLSSIGLGALALAWTW----------TKE 87 Query: 145 EVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDL-------PIIRDSEIQNFCLHGTVGAG 197 G ++ + G L I + I + + AG Sbjct: 88 RDDYGSAHWQTKAELKKNDMLQAPGKGFVCGKLGAPHSKAEFISSTMIPHVMMVAPTRAG 147 Query: 198 KSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD-----PSIDKILNPLD--ARCAAWDL 250 K + VV+ D GE + +P D ++ Sbjct: 148 KGVGF--VIPNLLSFAGSVVVLDVKGENFEKTARLRALNGDEVYRFSPFDWANATHRYNP 205 Query: 251 WKECLTQPDFDN-------TANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSK 303 P F A+ + K+ + +G++IF A L + + Sbjct: 206 LSRIAKAPSFAQRFTEVSILADLFLDKDNKQLDTFSEAGKSIFVAACLLAIQRGTPNLGE 265 Query: 304 LVDTLLSIKIEKLR-TYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY---LQGIEH 359 + + + + + + +++ E A + +LT+ ++A+ Q Sbjct: 266 VNKIVAGGEYKNAQYKTYADEAEEDILRELWTNAASASSRLLTSNIQALMTAGLKQWDNP 325 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR--GLLAMGENRN 417 T + L+I+ + D A+L P++ + + I + G + Sbjct: 326 AVRSATEASDFDFSTFRKTPQSLYIAVSEDHIATLAPLLRLMFADLIASIRMNEPGPDEP 385 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 V DE + +P L + +GG QS A L+ IYG + SL + Sbjct: 386 WPVMMMIDEFQQMGAMPYLERAIHSLASYGGRVAMIAQSLASLDRIYGPEGRESLENGAG 445 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 + + + + + +G + Y ST +E + L+S ++ Sbjct: 446 LKLYITPRDQRTVKEVSAAVGSTTREAVTRMYGRNKG-FLGATSTSARLEERPLLSETEA 504 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGR 597 + + + +P +KY P ++ P + Sbjct: 505 RLMDPDEVIILASPQHPIKASRIKYYDDPYFKAMLARQEGKPFPYPPSVQGV----GPWD 560 Query: 598 QMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGG-IEQELKMKPEE 656 + + E ++ Q+ + A++ K ++G P +E+E + E Sbjct: 561 SVDGDAALADEQAKPAERAPVRDRSQRRETRAMSLKTMEAGRGQPEPETLEREAAVPKEW 620 Query: 657 EMEQQ 661 E Sbjct: 621 EAALD 625 >UniRef50_C2ZYM5 TraG/TraD n=2 Tax=Bacillus cereus RepID=C2ZYM5_BACCE Length = 622 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 102/634 (16%), Positives = 220/634 (34%), Gaps = 73/634 (11%) Query: 89 RMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG 148 Q++H ++ ++ + +VA++ ++ F+ + ++ ++ ++ E+ Sbjct: 12 SFYVTQMIHTDFLKELIDRNFEHIQTFIIVAVIHIVLLVFLSIKLFRKKQRKLADGELLS 71 Query: 149 --------GRQLTDNPKDVARMLKKDGKDSDIRIG-DLPIIRDSEIQNFCLHGTVGAGKS 199 Q S I I +L + ++ L G G+GKS Sbjct: 72 WKDLKAEQDTQEAKGSFHTRNQRSFKKDKSGILISRNLKLSTKKSYEHVLLLGPTGSGKS 131 Query: 200 -EVIRRLANYARQRGDMVVIYDRSGEFVK---------SYYDPSIDKILNPLDAR-CAAW 248 + + +++ D GE + Y I+ +P + + Sbjct: 132 AQFFKPSLRTI--DNTSLIVTDPKGELHRDTKDFLEAKGYRVLHINFNTDPDEEVFSHNY 189 Query: 249 DLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTL 308 L C ++++ E W +T+ +L R+ +S + + + Sbjct: 190 SLLGNCTDDSSVRKIGDSILANTEGE---WGNLSKTLLLAFLFLERDMGEQSLNNVARNI 246 Query: 309 LS--IKIEKLRTYLRNSPAANLVEEKIEKTA------ISIRAVLTNYVKAIRYLQGIEHN 360 S +++L SP A L ++ KTA S+ A + + +K Y + + + Sbjct: 247 GSFPDDLDELEAIFSASPEALLQFKQFRKTARGDGYVSSVYATIQSVMKVFEYDKVKQVD 306 Query: 361 -GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL-------AM 412 F+ D + LF+S +P +S + I + + Sbjct: 307 SKSDFSPGDL------RTQKTALFLSYPTKDSKIYQPYLSSFYFQLISEIEAHPSMDESK 360 Query: 413 GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 + V F+ DE + +P E L R ++ G+QS AQL+ Y + + L Sbjct: 361 PGKKGYGVVFYMDEFANIGIIPSFAEFLTTVRSKNMSFILGVQSIAQLKANY-KDTFSIL 419 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 + TR H+ A+F + +GE+E+ S S + VST + +++ ++ Sbjct: 420 IENTKTRIALPGLIHETAKFFSDLVGEEEYNALSISSS-----AKSDVSTSESKQKKNVL 474 Query: 533 SYSDIQSLPDLTCYVTLPGPYPAVKLSLKY--------QTRPKVAPEFIPRDINPEMENR 584 S I+ LP P + + Y P+FI + + Sbjct: 475 SPDQIRRLPSNQLICVFNNLRPILDIVNYYYLDELDFKYKYEWKYPKFIATPLYKFLRKA 534 Query: 585 LSAVLAAREAEGRQMAS-LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPA 643 + E +++A+ E ++Q + P Sbjct: 535 TPNGIQVEEERVKELAAKFKEKHEETKEKAHSISQKRISENPE-----------ERKEAQ 583 Query: 644 GGIEQELKMKPEEEMEQQLPPGISESGEVVDMAA 677 +++E+++ EEE++ Q P + E+++ Sbjct: 584 RIMKEEIQILKEEELKPQQPIKQQDQNEILNSIK 617 >UniRef50_A4J2S8 TRAG family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2S8_DESRM Length = 682 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 100/678 (14%), Positives = 207/678 (30%), Gaps = 76/678 (11%) Query: 18 RIRMFSQIANIMLYCLFIFFWILVGLVLWIKISW----QTFVNGCIYWWCTTLEGMRDLI 73 M+ + ++ L + F +L + L + ++W + I + G+ Sbjct: 8 NAAMYL-VLAVVFGALVLIFPVLALVFLCMMVAWWAGGKVLYTPAIVFVTAISLGLTAGY 66 Query: 74 KSQPVYEIQYYGKTF---------RMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL 124 + V ++ + + ++ K + + VL + + Sbjct: 67 GMKCVQQVPRFDMSSGEWVKSDVQALSIRSWFSAKELSNPGNRAGRTGVLLGSLGGLGVA 126 Query: 125 ITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE 184 + F V G + K+ A++ + G + + + + Sbjct: 127 VAFKRRGKKRLHGPGIVQGRPVVKGG--WGDEKEAAKICEFGPPKPGKYGGGVVLGKLNG 184 Query: 185 ------------IQNFCLHGTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSY 229 + + G GAGK+ + G +VI D GE V Sbjct: 185 RILRVIIGRMAIAAHTAIFGATGAGKT--FGWVLPNIVSTAHDGWSMVISDPKGELVAGK 242 Query: 230 YDPSIDK----------------ILNPLDAR--CAAWDLWKECLTQPDFDNTANTLIPMG 271 ++ S + ILN D W+ E +F +I Sbjct: 243 WNASGEYEPGIADWLKKQGYEIIILNFKDPSQGSHRWNPLFEAKDDAEFRQVCEAMILSA 302 Query: 272 TKEDPFWQGSGRTIFAEAAYL-----MRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAA 326 KE+PF+ G +F L D R ++ LLS +EKL + Sbjct: 303 GKENPFFAGGESNLFTALMGLTRYGSFLKDEMRHMRTVLS-LLSWPVEKLDETFEKEYRS 361 Query: 327 NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE--PFTIRDWMRGVREDQKNGWLFI 384 + + + + N+ ++ + +G T + + +K LF Sbjct: 362 GQIPVYFYEKWRAAAGMFNNFATGVQSKVAVMTDGPLAALTAGHDINLLALSKKKTALFC 421 Query: 385 SSNADTHASLKPVISMWLSIAIRGLLAMGENRNR----RVWFFCDELPTLHKLPDLVEIL 440 T LKP+++ + + + L+ E N V F DE + ++P+ + Sbjct: 422 ILP--TIGDLKPLLTAFYYLLFKRLVEYAEANNNRLPIPVRFILDEFANIGRIPNFSNRI 479 Query: 441 PEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEK 500 R G CY + IQ+ QL +YG A + + R R K A + ++G Sbjct: 480 SFDRGLGICYNYIIQNRTQLNSLYGSDVAETFLGNTDIRMALRVNDDKTAGYFTRQLGSA 539 Query: 501 EHLKASEQYSYG-ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS 559 + SE+ + + ++ L+ + T V +P P + Sbjct: 540 DVWDISERKDVTWPWKRMEITKKTESKKKLDLLYPWQFYEMEFYTAVVRVPTCRPFYLDT 599 Query: 560 LKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQA 619 + + + E+ + A + + P E + Sbjct: 600 VAFSDLKEF----------KELSREPKTITDFAPAVPNHVPTPAIPSAEEEDEAPTPPKR 649 Query: 620 EQPQQPVSPAINDKKSDS 637 ++ ++ P + Sbjct: 650 QRKRKESHPDPAPDVASV 667 >UniRef50_C2BD69 TraG/TraD family protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD69_9FIRM Length = 679 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 81/489 (16%), Positives = 158/489 (32%), Gaps = 56/489 (11%) Query: 184 EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD----PSIDK-IL 238 N + G G GKS + ++ D SGE ++S+ D + Sbjct: 198 RNNNIIVIGGSGTGKSRYFAK--PNLLNANASYIVTDPSGELLQSHGKYLQSMGYDIKVF 255 Query: 239 NPLDAR-CAAWDLWKECLTQPDFDNTANTLI-----PMGTKEDPFWQGSGRTIFAEAAYL 292 N +D ++ + + +T I + DPFW+ + + + +L Sbjct: 256 NLVDMDLSHTYNPFSYIRDENGVYQMISTFILNTTPSGQSSSDPFWENAEKMLLTAICFL 315 Query: 293 MRN--------DPNRSYSKLVDTLLSIKIEK------LRTYLRNSPAANL---------- 328 + + +++++ + EK L + AN Sbjct: 316 LYESYVDDDGNKIDGTFAEVTRLIGYAIPEKEGKETKLDLIFKEVEKANPESIALFNYRN 375 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNA 388 ++ TA SI + + + + D ++K I +A Sbjct: 376 FKQAAGDTAKSIVISAQARL----FPFSLPKIKNLTSSNDINLETIGERKTALFAILPSA 431 Query: 389 DTHASLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEA 443 DT + ++S+ S L E+R V F DE + K+PD L Sbjct: 432 DT--TFNWIVSLMYSQLFETLYYKAEHRASKSLAIPVRFILDEFANIGKIPDFTNKLATM 489 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 RK+ +Q+ QLE +Y EK SL +T F S E+ + +G Sbjct: 490 RKYDISCSVILQNLNQLEKMY-EKDHKSLVGNCDTTVFLGSGEKDTMEYFSKILGSTTIY 548 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ 563 K S S G + S +D+ ++ L++ +I + + +T+ G P Y+ Sbjct: 549 KKSTGESLGRNK---SYSRNEDVIKRELMTPDEIGVMDNELSIITIRGERPFKDEKFPYE 605 Query: 564 TRPKVA----PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQA 619 P +NPE+ ++ + + ++ + + Sbjct: 606 KHPMYKYCGDGGGQELFLNPEVIKEMAKAYEINKELPSNNDEEIKKIDEQLSDYKTIKDW 665 Query: 620 EQPQQPVSP 628 + Sbjct: 666 SNEDINIVD 674 >UniRef50_Q981R7 Component of type IV secretion system n=1 Tax=Mesorhizobium loti RepID=Q981R7_RHILO Length = 775 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 96/693 (13%), Positives = 202/693 (29%), Gaps = 54/693 (7%) Query: 36 FFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQV 95 F L+GL + + + + W L Y+ + + A Q Sbjct: 9 LFLGLMGLAAFFALWSLAYELVATWRWNPALPSEGASRWGLLKYQNAQRSLSGLLVAWQH 68 Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 + + + Q + A A+V+ + + + ++ R+ K G + Sbjct: 69 FSQR-LAYRPTQGETIIRGAIAAAVVVAIGVGLIFASLINRKPK------HYGDARFGTI 121 Query: 156 PKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDM 215 + L ++G I D + + G +GK + Sbjct: 122 MDAERKNLLAKQGLILGKMGGATIRSDDPA-HVLVVGPTRSGKGVSF--VIPNGYMWRGS 178 Query: 216 VVIYDRSGEFVKSYYD-----PSIDKILNPLDARCAAWDLWKECLTQP----DFDNTANT 266 V +D E +++ +P + ++ D ++ Sbjct: 179 SVWFDPKRENFEAFGAHRQALGDKVFFFSPGERDSHRYNPLDFIRPDARMPTDCAVVSSF 238 Query: 267 LIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP---NRSYSKLVDTLLSIKIEKLRTY--LR 321 +IP T W +GR + + P + + + V LLS ++ LR +R Sbjct: 239 IIPEATGSSEIWARAGRQLLTAMIGYVLTSPRYEGQRHLRAVAMLLSTGVDFLRVLTNIR 298 Query: 322 NSPAANL----------VEEKIEKTAISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWM 370 N L ++T S LT + L F I Sbjct: 299 NDEEKYLPSWVVQGLNQFIALEKETRNSAYFNLTAALNPWTNDLVAAATASTDFDISKL- 357 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR--VWFFCDELP 428 + LFI + +P+I + + L+A + V DE Sbjct: 358 -----RKDPTALFIGCSVAQLDVFRPIIKILVQQIHDVLMASLPGPDEPYQVLVMIDEFR 412 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK 488 L K+ +V L +G V +Q AQL+++YG+ + + F R + Sbjct: 413 QLGKMESIVSKLAINAGYGFRMVLVLQDLAQLDEVYGKATRQTTVSACQVKLFIRMNDVE 472 Query: 489 IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVT 548 +E+ + +G + G + + + L + ++++ +P V Sbjct: 473 TSEYVSVMLGPTTIEVPTPIIRAGQG-IFGARDKSLSYQERPLRTAAELRQMPAKQAVVL 531 Query: 549 LPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVP 608 +P + + Y + E +R V + + SL + + Sbjct: 532 VPSAPGFMVRKVTYYKDAPYKATYQ------EFRHRRLKVPPLSRWQDLPLRSLADVEAA 585 Query: 609 EVVSGEDVTQAEQPQQPVSPAINDKK----SDSGVNVPAGGIEQELKMKPEEEMEQQLPP 664 + + +P +P DK + A G++ + Sbjct: 586 AHTAPAAPFELREPDTVEAPVSGDKAFADAAPPATGAAADGVDPVGPKPKVDSDSAGASR 645 Query: 665 GISESGEVVDMAAYEAWQQENHPDIQQQMQRRE 697 + G A + + + + Sbjct: 646 ALPSPGLRASGEAEAKSEDAAEVSELKPKRTDQ 678 >UniRef50_B5E5D6 Tn5253 TraG protein n=7 Tax=Streptococcus pneumoniae RepID=B5E5D6_STRP4 Length = 625 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 73/566 (12%), Positives = 166/566 (29%), Gaps = 92/566 (16%) Query: 109 WSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK 168 W+ A + ++ ++ GK+Q V G K+ K+ Sbjct: 55 WNVSFTGKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYGKEFL 114 Query: 169 DSDIRIGDLPI-------IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDR 221 I D+ + + +N + G G+GK+ R + Q ++ D Sbjct: 115 HDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKT--FRFVKPNLIQMNSSNIVVDP 172 Query: 222 SGEFVKS----YYDPSIDK-ILNPLD-ARCAAWDLWKECLTQPDFDNTANTLIPMGTKE- 274 + + + +L+ ++ ++ ++ T+ D + Sbjct: 173 KDHLAEKTGKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSG 232 Query: 275 ---DPFWQGSGRTIFAEAAYLMRNDPNRS------------------------------- 300 DPFW + T+ A + + N Sbjct: 233 SRSDPFWDEASMTLVRALASYLVDFYNPPKTREQLIEESRLSQKEYKNLLKRQKKEVEER 292 Query: 301 -----------YSKLVDTLLSIKIEK---LRTYLRNSPAA-----------NLVEEKIEK 335 SKL+ L + ++ L N + +K Sbjct: 293 KKRGRYPSFAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYKDK 352 Query: 336 TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 T S+ AV T + T RD + ++ +++ D ++ + Sbjct: 353 TLDSVIAVTTAKFALFNI-----QSVMDLTKRDTLDMKTWGKEKSMVYLVI-PDNDSTFR 406 Query: 396 PVISMWLSIAIRGLLAMGE-----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 + +++ S + L + V + DE + ++PD E R Sbjct: 407 FLSALFFSTVFQTLTRQADIDFKGQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSL 466 Query: 451 VFGIQSYAQLEDIYG-EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 V +Q+ AQL+ +Y ++A ++ ++ + +F +G +G++ + Sbjct: 467 VPILQNIAQLQGLYKEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSR 526 Query: 510 SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 S+G S + L++ ++ ++ C V + P Sbjct: 527 SFGQTG---SGSLSHQKIARDLMTPDEVGNMKRHECLVRIANMPVFKSKKYNSTKHPNW- 582 Query: 570 PEFIPRDINPEMENRLSAVLAAREAE 595 ++ + E + E Sbjct: 583 -RYLANQESDERWWNYQINPLNQNQE 607 >UniRef50_UPI000196DA88 TRAG family protein n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI000196DA88 Length = 678 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 91/619 (14%), Positives = 177/619 (28%), Gaps = 76/619 (12%) Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQ 140 + Y V+ S +L +A +L V+ + VVS + Sbjct: 29 VVYTQWLGLKTEPSVMLLPAYWAHSARLPAAMMLPLQVSTALAAAIPLVVSVLSLVAVFA 88 Query: 141 QSENEVTGGRQLTDNPKDVARMLKKDG----KDSDIRIG--DLPIIRDSEIQNFCLHGTV 194 + E+ G + + + L K+ D+ +G +R S + L Sbjct: 89 KPRRELHGSARFANRSEIKKTGLLKEKFQPEDAPDLLVGKYGGQFLRWSSKEFAYLAAPT 148 Query: 195 GAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSI--DKILNPLDA------ 243 +GK I + D VV+YD E + + NP Sbjct: 149 RSGKGVGI--VIPNLLHYRDSVVVYDPKMENFLITAGFRAKHGQEVFLFNPGGRMPEHER 206 Query: 244 ------RCAAWDLWKECLTQP-----DFDNTANTLIPM---GTKEDPFWQGSGRTIFAEA 289 W+ P D A + P F+ + R +FA Sbjct: 207 NPNAPLVSHRWNPLTYVRRNPTYTYKDALGVAAIMYPDPVNAGGSAMFFAEAARKLFAGL 266 Query: 290 AYLMRNDPNR----------SYSKLVDTLLSIKIEKLRTYLRN-------SPAANL---- 328 + + + L + L ++R+ SP A L Sbjct: 267 LMYLIETEPERDLGLLENRTTMANLFRLCAPTNGKTLSEWIRDEIELRSRSPQAALSGNC 326 Query: 329 ------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWL 382 KT I A +T + G D R +K + Sbjct: 327 ITLLSDFANGNAKTGADIVATVTAPLGIFIDPVVEAATGG-----DDFRLDDVRKKRMTV 381 Query: 383 FISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR------VWFFCDELPTLHKLPDL 436 ++ A + +++ S+ + G N DE L +P + Sbjct: 382 YLGVLPTETAVFARLTNLFFSLLANVNVYQGLPENNPGILKYQCLMLMDEFTALGVVPAI 441 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 + + + Q+ +Q+E +Y + + F + F AE + Sbjct: 442 EHGVSYLAGYNMRLLPIFQTPSQMEKLYQKTGMRTFFTNFGCQIVFPPRDQSDAEEYSRL 501 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAV 556 +G + S S+G R +++ +++ +++ +P C ++L P Sbjct: 502 VGYQTFKAKSSSRSHGKSSSRSNS---VSDQKRAVMNPDELKMMPKEDCIISLGSSRPIY 558 Query: 557 KLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDV 616 + Y P ++ PE+ + A P+ + +D Sbjct: 559 AQKIVYWQDPVLSKR--ANLTLPEVPVLQLDAPKRAAPQAAVKAEYLAPEELDGFHWQDG 616 Query: 617 TQAEQPQQPVSPAINDKKS 635 AE + + A+ S Sbjct: 617 ANAEDFARSILAALVPPGS 635 >UniRef50_Q6LGU8 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LGU8_PHOPR Length = 620 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 76/565 (13%), Positives = 160/565 (28%), Gaps = 103/565 (18%) Query: 100 YMIWCSE--QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPK 157 +M+W + Q F +V L + LI ++ +++ K + N+ + G + Sbjct: 57 WMLWSIKFTQFKLYFREVWLVHLAL-LIGGTLIFYLVTLTRKVATGNKTSQGTARWATRE 115 Query: 158 DVARMLKKDGKDSDI-----RIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR 212 D+ + +G+ + + L +R + ++ + G+GK + Sbjct: 116 DIKQAGLLNGRGVYVGAFESKKNTLEYLRHNTNEHVLCYAPTGSGKGVSF--VLPTLLSW 173 Query: 213 GDMVVIYDRSGEFVKSY------YDPSIDKILNPLDARCAAWDLWKECLT---------- 256 +V+ D E + + +I +P ++ +E T Sbjct: 174 PASMVVLDNKPELYEETAGWRSQHANNICLKFDPARRDSVKFNPLEEIRTNDYDASGRCT 233 Query: 257 -----QPDFDNTANTLIPMGTKED-PFWQGSGRTIFAEAAYLMRN--------------- 295 D N A + K++ + + + Sbjct: 234 LGDFEVSDTQNIATVITNPNGKDELDHFNKNAYALIVALILHTLYVEKQKGAVTSLSKVG 293 Query: 296 --DPNRSYSKLVDTLL--------------------SIKIEKL--------RTYLRNSPA 325 + + + L E L + + A Sbjct: 294 DILKDPNTLDIYAMLSIMMTTPHMQLNSEQPIFAFGKADAESLQHCTKTDTHPIVLQTAA 353 Query: 326 ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFI 384 +K EK SI + + E + F D + + LFI Sbjct: 354 EMF--KKPEKELGSIISTASEKFNLFLDPIVAENTSRSDFHYDDLRDNI----QPVSLFI 407 Query: 385 SSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 + ++P++ + L++ ++ R+ DE + KL L L R Sbjct: 408 QVRDNDQERMRPLVRLILTLILKRTTEHKNPHKHRLLLLLDEFTGIGKLKALETSLHFLR 467 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 +G IQ QL YG ++ + A+ + G ++ Sbjct: 468 GYGVKVYIIIQDNVQLYQTYGRD--ETITSGCEVTIALAPNKSETAQLLSTMTGIGTVVQ 525 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD-------------LTCYVTLPG 551 + S +S G + + L++ + LP + + G Sbjct: 526 ETLTTSGKKLSQGQNISRGIVEKSRPLLTVDECLRLPPAVKDESGTRIISAGKMLIFVRG 585 Query: 552 PYPAVKLSLKYQTRPKVAPEFIPRD 576 +P + Y P FI R Sbjct: 586 YHPILGTQSLYFKDPI----FIARH 606 >UniRef50_B8KYV9 Putative type IV secretory pathway VirD4 component n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYV9_9GAMM Length = 636 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 106/626 (16%), Positives = 214/626 (34%), Gaps = 53/626 (8%) Query: 42 GLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYM 101 GL+ I+ T+ W + G + + Sbjct: 30 GLLSGACIAALTYPVALWLGWQIPSSHSLMNYGQALTGSLAALGNLATGTIS--FREPAA 87 Query: 102 IWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR 161 + A V +T + +W+ R+ +S GG QL + +A Sbjct: 88 AFWEVAKEQATFGTLARVGVAAGLTGWTSAWVTRRELAPRSNMWHIGGNQLLSGKEAIAE 147 Query: 162 MLKKD--GKDSDIRIGDLPIIRDS------EIQNFCLHGTVGAGKSEVIRRLANYARQRG 213 ++ K+ + L + RD ++ ++G+VG+GKS +++ L + Sbjct: 148 ARRRSLTKKEQRDELHALSLHRDWTVSKKLLARHMFIYGSVGSGKSVILKHLLEQVVKLD 207 Query: 214 DMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 IYD G+F + P+ I+ P D R WD+ ++ TQ + ++IP Sbjct: 208 KKAFIYDIKGDFTSIFERPA---IVCPFDKRSWIWDVGQDVATQTQAAAFSQSIIPPEEG 264 Query: 274 EDPFWQGSGRTIFAEAAYLMRNDPNRSY-SKLVDTLLSIKIEKLRTYLRNSP--AANLVE 330 FW + + + ++ +++ + L++ E + L AA L+ Sbjct: 265 SGAFWASAAQALLEGCVRELQATKGKNWGWADLAALVARPAEPMAKALSLYYPRAAALIA 324 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP---FTIRDWMRGVREDQKNGWLFISSN 387 T S AVL N I L +P F++ DW++ E +K + + S Sbjct: 325 NPDSNTTSSCMAVLANGTAVIERLALAWPERKPDCMFSMLDWIKDSYEGRKQ--VIVQSG 382 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMG---ENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 D + IS +++A+ +++ + R + FF DEL ++ +L + +L R Sbjct: 383 PDEV-LARSYISAMINVAVPEIISPSLPDDESGRFLGFFFDELSSVGQLK-IEPLLALGR 440 Query: 445 KFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 G +Q ++Q+E +YG+K A + ++ T + + E + +G++ Sbjct: 441 SKGVVACMAVQDWSQVEKVYGDKTAQAFSGLVGTHIICQLQVGETREKISRNLGKRTVAW 500 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI---QSLPDLT----------CYVTLPG 551 + E +++V + V G Sbjct: 501 RTHDDKA-----------TVHEESKSVVPPGRLTDDLGFRKGKAYGKERWGIRAIVQTTG 549 Query: 552 PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVV 611 + L + PKV R + R ++ + A + Sbjct: 550 D--LLLLDWPGVSYPKVREG-QKRARWTKQGARPVEQKPMSPSDAQSAAEVQRVLKMTAD 606 Query: 612 SGEDVTQAEQPQQPVSPAINDKKSDS 637 Q P A++D + ++ Sbjct: 607 QAAAELQKRGATPPKLRAVSDDELEA 632 >UniRef50_C7N7M2 Type IV secretory pathway, VirD4 component n=2 Tax=Slackia RepID=C7N7M2_SLAHD Length = 627 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 83/572 (14%), Positives = 162/572 (28%), Gaps = 97/572 (16%) Query: 115 AAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI 174 AA+ ++ +V G+ + E G ++ R + +++ + Sbjct: 61 AALATGLVAACAVWVAWAYAISHGRAERSGEE-HGSARWGTRREGRRFMDLKDPRNNLIL 119 Query: 175 ---GDLPIIRDS------EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF 225 + + R +N + G G+GK+ + Q ++ D GE Sbjct: 120 TEHYGMAMSRPDHDRRYERNRNVLVIGGSGSGKTRG--YVEPNIMQMNASYLVTDPKGET 177 Query: 226 VKSYYDP-----SIDKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGT-----KE 274 + N +D ++ + D LI T + Sbjct: 178 LPRMGRMLEANGYEVASFNTVDFSASMHYNPLAYIKDEADILEFVTCLIENTTCEGRQAQ 237 Query: 275 DPFWQGSGRTIFAEAAYLMRND---PNRSYSKLVDTLLSIKIEK--------LRTYLRNS 323 DPFW+ + R ++ + +RS S LV L K ++ L Sbjct: 238 DPFWENAERLLYVALIGYLVYHCPARDRSLSGLVTLLSLAKAKESDEDFKSPLDLLFEEI 297 Query: 324 PA-------------------------------------------------ANLVEEKIE 334 + ++ Sbjct: 298 ETGVRLVADDSAGEAGFDPARRGSFSPSGAGVRRVRVADPVDVDSDFCLLHYKMFKDAAG 357 Query: 335 KTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASL 394 KT SI ++ Q E + + D + +DT + Sbjct: 358 KTLKSILVSCNTRMEPFAIPQVRELV----SYDEMALDRLGDPGAKRAVFAVMSDTSSLY 413 Query: 395 KPVISMWLSIAIRGLLAM-----GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 + ++ L + L G + V DE + KLPD+ ++ R Sbjct: 414 SFLFAIMLWQTMNMLCERALKEYGGSLPTPVHLVLDEFANIGKLPDVERMVAVIRSRNIS 473 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 +QS +QL+ Y E +A++ D +T F S + + + +G++ + Sbjct: 474 MSVILQSMSQLKARY-EDDSATIVDCCDTTLFLGGKSTETVKEISETVGKETVGTVTWSE 532 Query: 510 SYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 S GA P + + + LV +++ LP V + G P + P Sbjct: 533 SRGAMP---SSTRNWNTIERDLVQGAEVAKLPRDEAIVLITGTDPLKDKKYDIASHPMWP 589 Query: 570 PEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 + P RE + Sbjct: 590 QAY-PGHPGALFSEPYDFAARLREMREGREDG 620 >UniRef50_D1AV80 TRAG family protein n=2 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV80_STRM9 Length = 630 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 87/566 (15%), Positives = 175/566 (30%), Gaps = 85/566 (15%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 +K+M + +A A L + ++ F + + R T + Sbjct: 68 YPNKFMYLALSKTPNAARWAKYEYLALQVLIFIPYIILCFPIKWIPKDTSHGSARWATFD 127 Query: 156 PKDVARMLKKD----------GKDSDIRIGDL--PIIRDSEIQNFCLHGTVGAGKSEVIR 203 ++ L +DS + +G++ +IRD+ + L GK + Sbjct: 128 DLGLSGFLTPRISAKAFELNLLEDSGVVLGEVDGRLIRDNGKTHILLSAPTRTGKGVSV- 186 Query: 204 RLANYAR-QRGDMVVIYDRSGE---FVKSYYDPSID---KILNPLDARCAAWDLWKECL- 255 + D V + D GE + + +PL +++ KE Sbjct: 187 -IIPTLVDSWKDSVFVLDIKGENYQMTAGWRQKEFNNTIFKFSPLSIDSCSFNPMKEVRY 245 Query: 256 ----TQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYL--MRNDPNRSYSKLVDTLL 309 D A ++ DPFW +G + + + S +V + Sbjct: 246 LTPDEIDDAKTIAQIIVIDEGSSDPFWGLAGSDLATTLILYELYKGKGEANLSNVVKFIT 305 Query: 310 SI---------------------KIEKLRTYLR---------------NSPAANLVEE-- 331 E L L + + + Sbjct: 306 DPTGPLELRLKKLINKPIFDPDRDEEILEKLLEIYTAQDDQEQIKRGIHPFIDRGIADAL 365 Query: 332 -KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDW-MRGVREDQKNGWLFISSNAD 389 K EKT SI A + + + +I D+ + + K L+I Sbjct: 366 GKGEKTLQSIVATAKSKLSIFESPNV----EKNTSISDFRILDLMAADKPISLYIVVPPG 421 Query: 390 THASLKPVISMWLSIAIRGLLAMGE--------NRNRRVWFFCDELPTLHKLPDLVEILP 441 L P++ + + ++ L + R+ DE P + K+ L + + Sbjct: 422 QIQPLAPLLRILIIQCVQLLTPEMDYSGNSNKIKFKHRLLMLLDEFPAIGKMEILEKAIG 481 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 +G + +QS QL IY E T+ F+ + +K AE+ + IG++ Sbjct: 482 FVAGYGMKMMLVVQSLDQLNKIYSENNM--FMGNCQTQVFYTANDNKTAEYISKTIGQET 539 Query: 502 HLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 + S G + VS K + L+ +++ P + + G P + Sbjct: 540 VISKSVSSDGGGFFSKKNVSVSKS--GRDLIRPDEMRRFPLDKILLLVGGKPPIKSNKVL 597 Query: 562 YQTRPKVAPEF-IPRDINPEMENRLS 586 + + + +P + P M+ + Sbjct: 598 FFKDKRFKDKVKLPINPTPAMQREIE 623 >UniRef50_D1LZH1 TraG n=1 Tax=Rhizobium leguminosarum bv. viciae RepID=D1LZH1_RHILV Length = 906 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 111/742 (14%), Positives = 227/742 (30%), Gaps = 85/742 (11%) Query: 8 MTQGGQIASMR---IRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCT 64 M +GG+ S + + + +++ + IF G++++ + + Sbjct: 105 MLKGGRALSRKILYLLHVRSMFSLIAHTALIFTAAYAGVIVYGVAFYMVATKAGEHAEIA 164 Query: 65 TLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL 124 + G Q + ++ + Q + + F + A + Sbjct: 165 SYYGNHLAAMYQAPFGAIDAADAYQKPSRQTVLAALAGLAAAGAIVGFPIGAAI------ 218 Query: 125 ITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE 184 Q + G+ KD A +D + + ++R+ Sbjct: 219 ----------------QKRQRMIMGKARLATLKDAADFRLRDKHGIVLGLKQGLLLRNDG 262 Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS----YYDPSIDK-ILN 239 Q+ + G+ G GKS + V+ D SGE + D + +L Sbjct: 263 DQHVMVIGSPGQGKSRGF--VIPTMMSFQGSQVVLDMSGELFEETSGYLKDKGYEIFLLA 320 Query: 240 PLDARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKED--PFWQGSGRTIFAEAAYL 292 P ++ P D L+P + D FW+ S R + Sbjct: 321 PGSKFTDGYNPVDLISDDPNQRITDLQKLTQMLLPERLRSDSSDFWEESARILLTAMLGF 380 Query: 293 MRNDPN--RSYSKLVDTLLSIKIEK--LRTYLRNSPAA---------NLVEEKIEKTAIS 339 + P+ +S S+L L S+ E+ + L N + EK Sbjct: 381 VLECPDTRKSLSELYRILNSMSDERKAIIQLLENYEPVLSDQTRMQLTKFAGRHEKLGEG 440 Query: 340 IRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 I A + + ++ + ++ ++I ++ + + +IS Sbjct: 441 IAAEIVAKLNFLQNPLVEALTSITT-----IPIDTIRKRKLVIYIQADWNAMQIYERLIS 495 Query: 400 MWLSIAIRGLLAMGE--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSY 457 M++ L+ MG N V DE ++ ++ + P RK G +VF +Q Sbjct: 496 MFIQQMADKLVQMGPLRNGEHEVLMMLDEFGNGGRIDTVLTLAPLIRKNGVRFVFILQDG 555 Query: 458 AQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVR 517 AQLE +Y L + F + + A + G+ YS+ R Sbjct: 556 AQLERLYQRSGQKILMGASTIKLFMNFQNQEDATAVSMAAGKTTEWVEQSSYSHRHG--R 613 Query: 518 DGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL---------------SLKY 562 S K L+ + + + + + G P +++ K Sbjct: 614 RQRSISKVPVSVDLLPVNTLMMMKPEEAILQVTG-MPLMRIMKLDSGGERMFSKVRKFKP 672 Query: 563 QTRPKVAPEFIPRDINPEMENRLSAVLAAREA------EGRQMASLFEPDVPEVVSGEDV 616 RP + P D + ++ +A +G + + D D Sbjct: 673 AKRPCIEPVEWTIDDSKSAAAAPASTGTDIDAVRFVVKDGVRHVYISSLDELRHRLDLDE 732 Query: 617 TQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMA 676 T+ ++ V + D PA G +++ M E ++ G+ E + Sbjct: 733 TREAGVEEEVQAEKKKQSGDKRKRDPASG-QRKGGMPKTPEAARESDIGLDIDEEKLSSN 791 Query: 677 AYE-AWQQENHPDIQQQMQRRE 697 Y + + Q + Sbjct: 792 VYSGSPAHRSLRAKQANGPSDQ 813 >UniRef50_C8S1Z9 TRAG family protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Z9_9RHOB Length = 662 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 92/654 (14%), Positives = 205/654 (31%), Gaps = 46/654 (7%) Query: 67 EGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLIT 126 G+ + + + G+ VL ++ + + +V L T Sbjct: 14 SGLLVGLIAGGLVLNLILGRDPNATGIFVLIAEFPGFARLTSVPWVLPWQIVGASTVLFT 73 Query: 127 FFVVSWILGRQGKQQSENEVTGGRQLTDNP--KDVARMLKKDGKDSDIRIGDLPIIRDSE 184 V+ +Q + + + G ++ N + + + + + + Sbjct: 74 VAAVALTFRQQLTEYGQAKFQGRAEMKANGLLQPLGAGMVFGKLGAPSKTAPYVSATFQK 133 Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF---VKSYYDPSID--KILN 239 + + AGK + +V+ D GE + D + Sbjct: 134 FPHCLVVAPTRAGKGVG--YVIPNTLLFNGSIVVLDVKGEIFEATSRHRQAEGDAVYRFS 191 Query: 240 PLDAR--CAAWDLWKECLTQPDFDN-------TANTLIPMGTKEDPF-WQGSGRTIFAEA 289 P D ++ + +F+ ++ + + K + GR +F A Sbjct: 192 PFDFEHPTHRYNPLERVARIENFEQRYTELAKISDYFLTVSDKGTAGDFLAEGRELFVAA 251 Query: 290 AYLMRNDPNRSYSKLVDTL-LSIKIEKL----RTYLRNSPAA---NLVEEKIEKTAISIR 341 L + ++ L +++ +++ AA ++T S Sbjct: 252 GLLAIERGKPTIGEISRILFGRGATQEVYGEHAKEVKHPNAAQTFRKFAGYSDRTLSSHA 311 Query: 342 AVLTNYVKAI--RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 +VL + +G F+ D ++ +++ NAD +L P++ Sbjct: 312 SVLGGAGMTLWNNPAVDRATSGNDFSFADL------RKRPMSIYVVVNADDIRTLSPLVR 365 Query: 400 MWLSIAIRGLLAMGENRN---RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 ++ I + + + V DE L +P + + L + G QS Sbjct: 366 LFFGELIATMRSTLPDPKSEPWPVMVMLDEFDQLGPMPIVEQALKQLAGHGARVSIITQS 425 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV 516 L++IYGE SL + + + K A + +G+ L S+ S D + Sbjct: 426 IPGLDNIYGENVRLSLESAAGMKLYLAANDKKTAGEISDALGKTTKLSVSDSVSRDRDFM 485 Query: 517 RDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFI--- 573 + S + ME + L++ +++ L + P + + Y P F Sbjct: 486 QR-RSVSRRMEERPLLTPDEVRRLNPDQAILIPERQNPLLVHRIVYFQDPTFKKLFEAQK 544 Query: 574 -PRDINPEMENRLSAVLAAREAEGRQMASLFEPD--VPEVVSGEDVTQAEQPQQPVSPAI 630 P P+ + + EA R++A D PE V E +AE A Sbjct: 545 GPLPFPPKEAADVQVLTQRMEALERRLAERMVVDFVRPEKVKAEAPVEAEPKLAAEIVAR 604 Query: 631 NDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQE 684 ++ + + + E ++ + + ++ + Q+ Sbjct: 605 DEIGPEREATALNSDVLVPVSQPQATP-EPEVDLADLKPPITIAVSKMSKFSQK 657 >UniRef50_C4GHF7 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHF7_9NEIS Length = 780 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 97/682 (14%), Positives = 198/682 (29%), Gaps = 138/682 (20%) Query: 86 KTFRMNAAQVLHDKYMIWCSE---QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQS 142 + + A+ + +Y + + +AF+ + +A +I L ++ + K++ Sbjct: 36 QALKTPASLGVLPRYFAHTHQMSPTMHTAFIASCALAGIITLAPALMILVATFMKPKREL 95 Query: 143 ENEVTGGRQ-------LTDNPKDVARMLKKDGKDSD------IRIGDLP--IIRDSEIQN 187 + L + PK K++ K +D + +G ++R + Sbjct: 96 HGSARFANRAEIFQAGLLNKPKIGKPADKRNQKQTDQAEYPALLLGKYKGQLLRWMDNGF 155 Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYD--PSIDKILNP-- 240 + AGK I + D +V+YD E + + NP Sbjct: 156 VLVAARTRAGKGVSI--IVPNCLNYRDSMVVYDPKFENFLLTAGFRAQAGQKVFLFNPGG 213 Query: 241 ---------LDAR----------------------------CAAWDLWKECLTQP----- 258 + R W+ + P Sbjct: 214 LMPGISKAAFEERDEHGNIVSDADHVAQLAQQAEKLSQNICSHRWNPFTYISRNPLFTYR 273 Query: 259 DFDNTANTLIPMGTKE---DPFWQGSGRTIFAEAAYLMRNDP-NRSYSK----------- 303 D N A + PM + FW S R +F + M R Sbjct: 274 DLSNMAAIMYPMDGGGKNGNAFWIESARKLFVGLSLYMIETEAERPTRDADYKQRSSLGY 333 Query: 304 LVDTLL-------------SIKIEK----LRTYLRNSPAANL----------------VE 330 L S E+ L+ +L++ Sbjct: 334 LYRLATQTHSVSHSSNQQESDSNEETSNNLQAWLKSELDYRAQSEAPLSDACHTLLADFA 393 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 KT I + T + E T D R + +++ Sbjct: 394 NGNAKTNADIISTFTQPLGIFLDPIV-----EAVTSDDDFRLDDIRRCRMTVYLGIKPTE 448 Query: 391 HASLKPVISMWLSIAIRGLLAMG------------ENRNRRVWFFCDELPTLHKLPDLVE 438 + + +++ S I + G + DE L +P +++ Sbjct: 449 TGTFARLTNLFFSQLINVNVEQGLPENNLNPATGKTTLPHQCLLLMDEFTALGNVPAIMD 508 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 + +G + +QS AQ+E +YG + A + F R F A+ + +G Sbjct: 509 GVSYVAGYGLRLMIIVQSPAQIEAVYGRENARTFFTNFACRVMFTPRDQTEAKEYSEILG 568 Query: 499 EKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL 558 + S+ S G S +++ L+ ++I+ +P C + + P Sbjct: 569 NETVKAKSKSRSTGRG---TSHSQSISEQKRALMYDTEIKQMPMDKCILDMAAMPPIYAD 625 Query: 559 SLKYQTRPKVAP-EFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVT 617 ++Y P IP P +E LS V + ++ L + ++ + Sbjct: 626 KIRYYDDPLFKERAKIPPPTIPIVEPTLSKVRYVVPKKEKKAKPLKQHEIQIETANNKDP 685 Query: 618 QAEQPQQPVSPAINDKKSDSGV 639 A+ ++ ++ +D Sbjct: 686 FAQHLVNELALGMSQNLADFPN 707 >UniRef50_C9R835 TRAG family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R835_AMMDK Length = 663 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 104/660 (15%), Positives = 206/660 (31%), Gaps = 74/660 (11%) Query: 22 FSQIANI-MLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYE 80 F+ +A Y L + + V W + + LI + Sbjct: 24 FTLVAGFCWSYPLLLLWAGAVAWTAWQRRKDAVLACLLPWLLAALFYNAGALI-----FS 78 Query: 81 IQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQ 140 + K M AA+ ++ ++ A +V + + + + Sbjct: 79 LAALAKGGAMPAAKFWDWGWLGLAPLSPPDSWARAGLVVGMPASLLLGRL------RRTT 132 Query: 141 QSENEVTGGRQLTDNPK-------------DVARMLKKDGKDSDIRIGDLPI-------- 179 + + G ++ D+P DV + +G L Sbjct: 133 RHDERHVHGLRVADSPAKGTGRWGSDRDVADVCEFGPPGPGHGGVVLGKLKGRIVRAVPE 192 Query: 180 --IRDSEIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGEFVK------SY 229 + G GK+ V+ + A G+ +++ D GE Sbjct: 193 KAPTVKRPAHALAVAGSGGGKTFCFVVPNVIAGACD-GESLIVTDPKGELTPLLAPWLRK 251 Query: 230 YDPSIDKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLI---PMGTKEDPFWQGSGRTI 285 + N D R + W+ EC T + A L+ K PF+ Sbjct: 252 RMGYKVFVFNLADPRHSSFWNPLLECRTPVETYQAAQVLVLNAQERGKGSPFFTALEIQA 311 Query: 286 FAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAV 343 L+R D ++++ + V +LLS +L+ ++ A ++ + + + Sbjct: 312 LTALMSLLRADFPEDQAHLRSVLSLLSWPKNRLKERFDSAYRAGKLDVEGHEAFRGAYSH 371 Query: 344 LTNYVKAIRYLQGIEHNGEPFTI--RDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 N V + + + + + R + ++ LF L+P+++++ Sbjct: 372 WENAVAGLTSKLALFRDPDLARLLSRQELDLEAFGKEKAALFCVLPVG-SDYLRPILAVF 430 Query: 402 LSIAIRGLL-----AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 + L + G+ V DE + ++P EI+ AR G ++ +Q Sbjct: 431 YHFLLDRLYTLARSSPGQRLPVPVRLILDEFANIGRIPKFQEIMATARGLGIKVLYVLQE 490 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG-ADP 515 QL+D Y + S+ + + E+ + E+GE +E+ Sbjct: 491 LQQLKDNYPGEDM-SILGNTFVKVYLGGSEKPTREYFSRELGEAAVYVETERQDVTHPWN 549 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 + + + R+ L+ ++ LP+ C L G YP + P+ Sbjct: 550 RLEAPKRTRTVVRRALMEADELGRLPEKNCVALLQGHYPLYLEKCGWTELPQARE----- 604 Query: 576 DINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKS 635 L+ A E R L P PE GED Q+P + D Sbjct: 605 ------IRELAGRTVADVVEARPDVQLQLPPYPE---GEDEDGKPGNQEPRVRSGADDGD 655 >UniRef50_C6LA24 TraG/TraD family protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA24_9FIRM Length = 680 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 74/514 (14%), Positives = 167/514 (32%), Gaps = 44/514 (8%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 + D + L ++ +CL+ + V + G + Sbjct: 39 VRDLLVQALRSPLPVRITELTGKSVAVCLLVWGVGYIYYLASVGNYMPGKEYGTSRFIPA 98 Query: 156 PKDVARMLKKDGKDSDIRIGD-LPIIRDSEI--QNFCLHGTVGAGKSEVIRRLANYARQR 212 ARM+ + ++ + + L I + N + G GAGKS + Q Sbjct: 99 SGISARMMDRKHPQNNKILSEHLRISTAARNFNNNCLVIGGSGAGKS--FYVVKPNILQC 156 Query: 213 GDMVVIYDRSGEFVKSY-----YDPSIDKILNPLD-ARCAAWDLWKECLTQPDFDNTANT 266 +V+ D GE ++ ++LN +D A+ ++ ++ + D Sbjct: 157 NASLVVTDPKGECLRDCGGYLEAQGYRIRVLNLIDFAKSDHFNPFEYIRSDNDIIRLITN 216 Query: 267 LIPMGT-----KEDPFWQGSGRTIFAEAAYLMRNDP-----NRSYSKLVDTLLSI----- 311 I T + DP W+ + + Y + S ++D Sbjct: 217 FIANTTPKQSMQSDPMWERAEGLLLQALMYYEWYEGPKQGRKPSIRGVMDLKNKAKVNDD 276 Query: 312 -KIEKLRTYLRNSPAANLVEEKIEK-------TAISIRAVLTNYVKAIRYLQGIEH-NGE 362 + LR P + E T S+ L + + + + + + Sbjct: 277 GSPSETDILLRALPEEHPARIAYENVMAGAGDTIRSVLISLNARMALLNNPEILRILDSD 336 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR---- 418 I GV E+ D S ++ M+ ++ + L + +++ Sbjct: 337 DMDIAALGEGVYENPARKTAIFCVIPDNDKSYNFLVGMFYTLMFQELERIADHKYHGTLP 396 Query: 419 -RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 V F+ +E + D +L R +Q+ AQL+ ++ + A ++ + Sbjct: 397 VPVAFWMEEFANVALPEDFCTVLSTMRSRNMSANIIVQNIAQLKVLF-KDAWENVTGNCD 455 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 T + ++ + +G++ K + + G S D+ + L+ +++ Sbjct: 456 TMVYLGGNEQGSHKYVSESMGKRTIGKRATGETRGEHG---NSSRNYDVLGRELLDAAEV 512 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 + L + C V + G P + + + + Sbjct: 513 RKLDEKKCIVMIKGRDPVLDEKYRTWEKKEYLEA 546 >UniRef50_C6BB42 TRAG family protein n=15 Tax=Alphaproteobacteria RepID=C6BB42_RHILS Length = 561 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 71/500 (14%), Positives = 152/500 (30%), Gaps = 42/500 (8%) Query: 103 WCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARM 162 + +W ++ V+ LI F I + + T G +++A + Sbjct: 69 HRGDVIWHIGDWVFMLFAVVLLIRFLSEPLITHFS---TASDADTHGTARFGGTREIAPL 125 Query: 163 LKKDGKDSDIRIGDL----PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI 218 K +G + IG ++R + +GK + ++ Sbjct: 126 TKAEG---GLLIGRANNSGRLLRYGGPAHLLTMAPTRSGKGVG--TIIPNLLTADRSIIC 180 Query: 219 YDRSGEFVKSYYDP----SIDKILNPLD---ARCAAWDLWKE-----CLTQPDFDNTANT 266 D GE + D IL+P AA++ D A+ Sbjct: 181 IDPKGENAQIAGDARQKFGPVHILDPFGITGKPSAAFNPMNGFNPAGIDVAEDVSTLADA 240 Query: 267 LIPMGTK--EDPFWQGSGRTIFAEAAYLMRN---DPNRSYSKLVDTLLSIK---IEKLRT 318 L+ D W + + A + D R+ + L L L Sbjct: 241 LVFDEPGLSGDAHWNEEAKALIAGLLLHVLASQPDDRRTLTMLRHFLTLAPEAFRAVLDE 300 Query: 319 YLRNSPAANLVEEKIEKTAISIRAVLT---NYVKAIRYLQGIEHNGEPFTIRDWMRGVRE 375 + L+ + + + + + + D+ R Sbjct: 301 MQASDAVNGLIARAANRHLGKSDREASGVLSAAQRHTHFLDSPRMTAVLSRSDF-RFSDL 359 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA---MGENRNRRVWFFCDELPTLHK 432 +F+ D A+ + + ++ ++ + + V + DE L Sbjct: 360 KANKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPSPQPSAPPVLYLLDEFAALGH 419 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 L + + +G +Q QL YG++ A + F H A Sbjct: 420 LAPIERAMGLMAGYGVQLWPIVQDIHQLRATYGQR-AGTFLSNAGVLQVFGVNDHDSARL 478 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 + +G++ + + + D R G+S + + L++ +++++ T + + G Sbjct: 479 VSDLLGQETVVFNTAARA--LDSERTGLSFAEQHVGRPLLTPDEVRNMHAETELLFIAGQ 536 Query: 553 YPAVKLSLKYQTRPKVAPEF 572 P + L+Y P+ A F Sbjct: 537 RPIAAVKLRYYADPEFAGLF 556 >UniRef50_UPI0001C37912 TRAG family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37912 Length = 689 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 89/684 (13%), Positives = 195/684 (28%), Gaps = 122/684 (17%) Query: 66 LEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLI 125 ++ + + S I + +T N Q +M F L+ L Sbjct: 13 IKAVPYVAFSYVGNLIGFAYRTAEGNGFQEKILPFMSNLGVAFARIFPSLHPFDLLFGLG 72 Query: 126 T--FFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD--------GKDSDIRIG 175 + + + K++ G + + KD+ + K + +G Sbjct: 73 LAGVMRLVLYVKSKNKKKFRQGEEYGSAVWGSEKDIEPYMDLSCPENNVILTKTESLTMG 132 Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE-------FVKS 228 + + +N + G G+GK+ + Q V+ D G ++ Sbjct: 133 KPSAPKFARNKNILVIGGSGSGKTRFF--VKPNLMQMHSSYVVTDPKGTVLVECGRMLER 190 Query: 229 ------------------------------YYDPSIDKILNPLD-ARCAAWDLWKECL-- 255 Y+P K+ N +D A+ ++ + Sbjct: 191 GRPKRVNGKVVYRRDDKGNYLKDKNGRYIPVYEPYKIKVFNTIDFAKSMHYNPFAYISKK 250 Query: 256 -TQPDFDNTANTLIPMGTK-----EDPFWQGSGRTIFAE---AAYLMRNDPNRSYSKLVD 306 + D LI + D FW + + ++ + M + ++ L+D Sbjct: 251 NREKDILKFVEVLIKNTSSSQQPSGDDFWVKAEKLLYTAYIALIFAMYPEDEWNFETLID 310 Query: 307 TLLSIKIEKLRTYLRNS------------------------PAANLVEEKIE-------- 334 + + + + +NS A+L E K + Sbjct: 311 MINNSECREDDEEFKNSIDLEFEIVECWLNGTKHDDPDVMEDYADLFETKPDAEQRRMGT 370 Query: 335 --------------KTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNG 380 KTA SI + + + +E D + + + Sbjct: 371 FALKQFKAYKLAAGKTAKSILISCSTRLAPFAIDEVLEITSY-----DELHLDKLGDELS 425 Query: 381 WLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN-----RRVWFFCDELPTLHKLPD 435 LFI +DT A+ ++++ S L +N V DE + ++P Sbjct: 426 ALFIII-SDTDATFNFLVAIMYSQLFNLLCTKADNSPGGKLTYHVRCLLDEFANIGEIPQ 484 Query: 436 LVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAG 495 +++ R +Q+ +QL+ IY + A ++ +T F + + Sbjct: 485 FEKLIATIRSREISASIILQAKSQLKAIY-KDNADTIEGNCDTMLFLGGKEKSTLKEISE 543 Query: 496 EIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPA 555 +G++ + + G + L S ++ + C + L G P Sbjct: 544 SLGKETIDSFNTSTNRGQSE---SYGMNYQKLGKELKSQDELAVMDGGKCILMLRGVRPF 600 Query: 556 VKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGED 615 + + + A + V +G++ Sbjct: 601 FSDKFDITRHKQYPMLLDDNPEMGFNIEKYVSDQKAMRLRLSRQEKFTGYGVDMTAAGQE 660 Query: 616 VTQAEQPQQPVSPAINDKKSDSGV 639 VT + + N +++D Sbjct: 661 VTTVSATETETADTQNSEETDEKE 684 >UniRef50_A7VXU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXU9_9CLOT Length = 661 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 86/544 (15%), Positives = 169/544 (31%), Gaps = 53/544 (9%) Query: 136 RQGKQQSENEVTGGRQLTDNPKDVARMLK-----------KDGKDSDIRIGDLPIIRDSE 184 ++ + +E T G N ++ ++L D+ +G ++ Sbjct: 105 KERGFEILSEGTHGTSGWLNKSEIEKILNVSSLNSMTETLFGKLDNGGYVGMKELL--GM 162 Query: 185 IQNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVIYDRSGEFVKSY----YDPSIDKI-L 238 +N ++G G GKS A +RG+ +VI D EF + Y + Sbjct: 163 SKNIMVYGAPGTGKSRGFVMPFIMQAVKRGESMVICDSKAEFYEMYSEYLRNEGYFVRSY 222 Query: 239 NPLDAR-CAAWDLWKECLTQPD-FDNTANTLIPMGTKE---DPFWQGSGRTIFAEAAYLM 293 N LD + W+ + + + A +I + + + FW + + + + + Sbjct: 223 NLLDLQASDGWNCLMDSADDVNLVQHIAEVIIRNTSADSEREDFWSKAEKNLLMALIHYV 282 Query: 294 RND-----------PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRA 342 ++ RS + L S + ++ R P + + Sbjct: 283 QSLTYPNSDKLLPPEERSLGTIYRLLASTSVAEMDARFRALPPGHPALPPYGIFRQAPHN 342 Query: 343 VLTNYVKAIRYLQGIEHNGEPFTI---RDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 + N + + + N +I + +K + I S+ D + + + S Sbjct: 343 IWGNIMIGLGSRLNVFQNKLADSITKYNEIDLEEPGKRKCAYFCIISDQD--DTYRFLSS 400 Query: 400 MWLSIAIRGLLAMGENRNRR-----VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 M+ S+ L R V DE + LP+ + L +R Sbjct: 401 MFFSLLFIKLFDFARKSENRRLPVRVNVLMDEFCNI-DLPNSKKYLSVSRSRNIDIQCVA 459 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS---- 510 QS +QL D Y L + + F A+F + + G S Sbjct: 460 QSVSQLADRYPRTEWQELVGDCDYQLFLGCNDTMTADFISSQCGNITVRVNSASIPMTPM 519 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 + S GK+ + L+ +I+ LP + + G P + + + P Sbjct: 520 FSLSSNHARYSQGKNSAGRPLMMPDEIRRLPKDKAILLVRGAKPLMLYKIVPEEHPDFKK 579 Query: 571 -EFIPR-DINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQ-PVS 627 F D P+ R E + E ++ + Sbjct: 580 LRFCKAVDYVPDWRKRECERQNVISKEDTDKKENTFQIRIKEADIESAEYVPNEEELELH 639 Query: 628 PAIN 631 P+IN Sbjct: 640 PSIN 643 >UniRef50_Q8ZSH1 Alr7539 protein n=6 Tax=Nostocaceae RepID=Q8ZSH1_ANASP Length = 608 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 89/501 (17%), Positives = 167/501 (33%), Gaps = 32/501 (6%) Query: 154 DNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQR 212 D+ + K +G+ G +P+ + + G G+GKS I + A + Sbjct: 112 DSASLYIGVHKYNGQKLPQGSGGVPVYIPDVQRGTAVIGAPGSGKSFSAINPMIYSAIDQ 171 Query: 213 GDMVVIYDRS----GEFVKSYYDPSIDK-ILNPLDARCAAWDLWKECLTQPDFD---NTA 264 G +V+YD + D I P + D + A Sbjct: 172 GFGIVLYDFKYASQAKIASYAKSKGYDVHIFAPGFPESEVCNPIDFLRDSSDAETARQLA 231 Query: 265 NTLIPM-----GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIK------- 312 + ED F+ +G + L + + + +LS + Sbjct: 232 TVINKNFRLLGNASEDAFFGPAGDQLTQAILMLTKEFGDHADIMTAAAILSSEKMVERLM 291 Query: 313 IEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRG 372 +L ++R + EKT I + + T+ Sbjct: 292 AAELNPWIRIAFGQLFSSAGSEKTVAGIAGSASLMFTRFMARGTLGCFVGKTTL------ 345 Query: 373 VREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHK 432 E ++ + + + ++ P+++ L + + +A + + DELP++ Sbjct: 346 PLEVKRKQMIIFGLDRERRDAVSPLMTSILHMVVSRSIAKKRKEDGPLVVCLDELPSIF- 404 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEF 492 LPDL L E+R G C + G Q+ QLE IYG++ + ++ T+ F + A Sbjct: 405 LPDLFRWLNESRSEGFCGILGWQNMGQLEKIYGKEISKAILGACGTKFVFNPGEEESARL 464 Query: 493 AAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGP 552 + +GE+E + S G S + + L + LP C P Sbjct: 465 FSAYLGEEEIKYKQKSRSTGGGK--SSTSISEQERTRKLFEPAQFLKLPPGKCLFINPAY 522 Query: 553 YPAVKLSLKYQTRPKVAPEFI-PRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVV 611 + S+ K+ + I N ++L LA + + + + V EV Sbjct: 523 SNKNEGSVPLLKNIKIPKQIIGLEQENDANWDKLIKELARKSTQKKPTQEDLDLRVKEVA 582 Query: 612 SGEDVTQAEQPQQPVSPAIND 632 + QA Q +P D Sbjct: 583 RKFPIPQAP-VQAGNAPLPVD 602 >UniRef50_C5EJN7 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJN7_9FIRM Length = 539 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 80/520 (15%), Positives = 169/520 (32%), Gaps = 51/520 (9%) Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVL--AAVVALVICLITFFVVSWILGRQGKQQSENEVT 147 + + ++ + ++ LV+ T F WI+ +GKQ E + Sbjct: 12 LAFTGLYLPPFLCLFLPHIIPGISSRQIMIINLVLIAWTSFNNFWIVACEGKQLDEIHIG 71 Query: 148 GG-------------RQLTDNPKDVARMLKKDGKD---SDIRIGDLPIIRDSEIQNFCLH 191 G +++ PK ++L K+ + + + + ++C+ Sbjct: 72 DGLVPETGLKKESPQKRIAMYPKVPPKLLSKEPEGIILGKYKNQYVRVPLKDIY-HYCIL 130 Query: 192 GTVGAGKS--EVIRRLANYAR--QRGDMVVIYDRSGEFVK---SYYDPSIDKILNPLDAR 244 G G GKS ++ L + G D GE + ++P +++P + Sbjct: 131 GGTGVGKSSGVLLNSLLANFAGGKNGFTSFSIDIKGELHEVSSPMFNPD-VIVVDPENRD 189 Query: 245 CAAWDLWKECLTQPD-------FDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP 297 WD++ P + + LI +D F+ + +T Sbjct: 190 SCGWDVYYRLHNHPSNDLILAAIEEISEGLIVSTNSKDFFFVENAKTALTGLLVYYYMRG 249 Query: 298 NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK----IEKTAISIRAVLTNYVKAIRY 353 + L S + +++S ++L + KTA S++ + T ++ Sbjct: 250 ESFIDSVNRILESDTASLITEIIKDSEPSDLWYKYLAKFNGKTAESVQDIFTEMCTSLS- 308 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQ--KNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 + F RD + + +F+S D + K ++ + + L Sbjct: 309 --VFSKDSVRFCFRDNYQKASPYSLLEGKSVFLSIKEDMLETYKAIMRLCTVQVFKELER 366 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 + + + + DE + ++ + L R + QS AQ E IYG+ A Sbjct: 367 RPKEQKKPILLIIDEFARIGEIKGVFNALYTLRSRNVMVLLAFQSLAQAEQIYGDDGARI 426 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 L D + K + + G + E + G + + E + + Sbjct: 427 LMDNCRVKVILECNDPKTQKAISDWCG--TYRDKKETLNGGKNRHK-----SYTYEDKPI 479 Query: 532 VSYSDIQSL-PDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 V +D+ L + L G + Y K+ Sbjct: 480 VDANDLIKLAGKGEEILVLGGIGYLRTIKCPYFRDEKLKA 519 >UniRef50_B2TS91 Type IV secretory pathway, VirD4 component n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TS91_CLOBB Length = 739 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 97/750 (12%), Positives = 237/750 (31%), Gaps = 101/750 (13%) Query: 43 LVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMI 102 L + +K ++ + + + + + K Sbjct: 7 LKMLMKNDNESNKEMKLLQFLANQKLILLSTLIVFFLVTVLANLLSNAVMYLIGGSKSFS 66 Query: 103 WCSEQLWSAFVLAAVVALV---ICLITFFVVSWILGRQGKQQSENEVTGGRQLT-DNPKD 158 + + + +V I + V + + ++ + R T + K Sbjct: 67 FLVSAFKFKLLSFPIFYIVMYSFTAILLWKVFFNFKASFRTINDGQKGTSRFTTIEELKA 126 Query: 159 VARMLKKDGKDSDIRIGDLPIIR-------DSEIQNFCLHGTVGAGKSE--VIRRL-ANY 208 R + + ++ D + G +PI R D N + GT +GK E + + Sbjct: 127 QYRSIPEKTEEFDGK-GGVPISRYKNKIFIDDSPVNNIIIGTTRSGKGEMFIFPTIDIYS 185 Query: 209 ARQRGDMVVIYDRSGEFVKS-----YYDPSIDKILNPLDA-RCAAWDLWKECLTQPDFDN 262 + ++I D GE + + ++LN L +++ + + N Sbjct: 186 RAKEKASLIINDPKGELIAASQDTLKKRGYRIELLNLLKPMNSMSYNPLQLIIDAYKKKN 245 Query: 263 TANT----------LIPMGTKEDPFWQGSGRTIFAEAAYLM------------------- 293 + L +DPFW S + + Sbjct: 246 YSEAQSLCSTLTYTLYYDPNPKDPFWMNSAMGLVNALILAVIDECFKKSDEIEKEMEKLD 305 Query: 294 --------------RNDPNRSYSKLVDTLLSIKIEK-------LRTYLRNSPAANLVEEK 332 + + + + L + ++ L Y ++ + + Sbjct: 306 KNHKEFKVLEERKDKELSKMTLYTVANMLSELGSKEDEFQRNELDNYFSKLDPSSAAKMQ 365 Query: 333 IEK-------TAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFI 384 T I + + ++ + + + ++D +++K LFI Sbjct: 366 YATSNFSKGTTRGGIFSTAMSKLQIFTLDEIAKMTSMNSINLKDIGFKNNDNEKPTALFI 425 Query: 385 SSNADTHASLKPVISMWLSIAIRGL-----LAMGENRNRRVWFFCDELPTLHKLPDLVEI 439 D S + S+++ L L +R V F DE + + + I Sbjct: 426 -VTPDYDVSNHVIASIFIRQLYYVLAKESSLNDSGKCDREVIFLLDEFGNMPPIEGMANI 484 Query: 440 LPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGE 499 + G + IQ+Y+QL+ +YG+ ++ + + + ++ AE + IGE Sbjct: 485 ITVCLSRGIRFNCVIQAYSQLKKLYGDDK-ETILGNCGNQIYILTNENETAEEFSKLIGE 543 Query: 500 KEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS 559 + + YS + + + ++ + L+ +++SL + V L Sbjct: 544 ETIV----TYSRSGEILDSTKHQTESVDSRRLLRAEELRSLNEGETVV-------VRALK 592 Query: 560 LKYQTRPKVAPEFIPRDINPEMENRLSAVLAARE-AEGRQMASLFEPDVPEVVSGEDVTQ 618 + K+ P I I + + + E + +++ + E V +++ Sbjct: 593 RRDLKNNKITPRPIFNSIKTTTDMKYRYEYLSDEIDNSKSFSTVKVESLHESVDLKELLL 652 Query: 619 AEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAY 678 + S ++ +D+ N+ I + + E+ + +S + E+ + Sbjct: 653 FNNNNKSESLENSNNDTDNNKNI---IISEVFDVDEISEIRNIIRKYLSTAFEIELDTPF 709 Query: 679 EAWQQENHPDIQQQMQRREEVNINVHRERG 708 + +++ + +Q+ + E IN E G Sbjct: 710 DLFRKFCENENNEQLMKFAEKGINRITEMG 739 >UniRef50_Q2ESM6 Hypothetical conjugation protein n=6 Tax=Bacillus thuringiensis RepID=Q2ESM6_BACTU Length = 638 Score = 252 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 83/614 (13%), Positives = 188/614 (30%), Gaps = 86/614 (14%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN-----EVTGGR 150 L +I+ L ++ ++ ++ W R K + +N E +GG Sbjct: 32 LTTFSVIYPWVILKQSYGTFYLILQGFVATAIVLIIWKENRGIKNKMKNGIGGPEASGGG 91 Query: 151 QLTDNPKDVARMLKKDG-----KDSDIRIGDLPIIRD---------SEIQNFCLHGTVGA 196 Q + + + + I+ + + D SE ++ + GT G+ Sbjct: 92 QFGTSRWQTEKERDANNSVWKYEKEPIKTAGIVLGADLKKKKVWLVSEDEHTLIIGTTGS 151 Query: 197 GKSE-VIRRLANYARQRGDMVVIYDRSGEFVKSYY-----DPSIDKILNPLDAR--CAAW 248 GK+ +I + G+ +++ D GE + +L+ + W Sbjct: 152 GKTRRIIYPAIWTLAKAGESMILTDPKGELYAATKKFLEEQGYEVIMLDFRKPKASTHHW 211 Query: 249 DLW----------KECLTQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMRNDP 297 + E N AN ++ DP W ++ A + + Sbjct: 212 NPIKAVVDALKEDDESKASEAAWNIANMIVYQKERTGDPVWATGAESVIAALILYIAIES 271 Query: 298 NRSYSKLV---------------DTLLSIKIEK---LRTYLRNSPAANLVE-------EK 332 + K + + +E+ L + + +L + Sbjct: 272 KKDSQKHMASVFQLLVEYGVVKKREIGDGMMEEYVPLLELIESLERGHLAKLAFATAGMA 331 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHA 392 EK S A + ++ + +D ++K I D Sbjct: 332 PEKMRGSFFASVAADLRLFADPSIAYMT----SFQDHDLKQPGEKKTATFLII--PDEVK 385 Query: 393 SLKPVISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFG 447 + + ++++ L+ + +R R DE + ++ D + +R G Sbjct: 386 TRHFLATLYIDQTYFELVNLANSRPEGRIAIRTSCLLDEFGNMPRISDFDTKITVSRSRG 445 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 Y +Q Q+++ YG+ A ++ + + ++ AE + ++G A++ Sbjct: 446 VRYNIVVQGLDQIKEKYGK-LANTITGNCRVWLYLLTGDNETAEVISKKLGTYTV--ATD 502 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPA---------VKL 558 YS S +++ ++ L++ ++ PD V Y + Sbjct: 503 GYSATTRTKDFSASYSQNLSKRELLTPDEVMRFPDFEAIVIRQRQYATRVPTPDISKYPI 562 Query: 559 SLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQ 618 R + + I D+ + + L A E + + E D+T Sbjct: 563 KFIPIERGDLEKKDIRFDVFDPFKAQWEGELEAIEKANKTNDLEETAETEEFEETMDITN 622 Query: 619 AEQPQQPVSPAIND 632 + D Sbjct: 623 EPIDVAEQKESYMD 636 >UniRef50_Q8E5A4 Putative uncharacterized protein gbs1128 n=3 Tax=Streptococcus RepID=Q8E5A4_STRA3 Length = 681 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 85/658 (12%), Positives = 200/658 (30%), Gaps = 75/658 (11%) Query: 70 RDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFV 129 L P ++ + ++ Y W + L +L+A+V + L+ + Sbjct: 26 YVLYCMAPQADMTNLFAPYTYVFEKITEPPYFYWNTSPL---AILSALVGFFVGLLFYLK 82 Query: 130 VSW-ILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII-RDSEIQN 187 + R G++ ++L + +R +++ + + + + +N Sbjct: 83 IRLDGNYRHGEESGSACFATAQELKGFQDEESRNNMIFSREAQMGLFNKRLPFERQLNKN 142 Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS-----YYDPSIDKILNPLD 242 + G G GK+ + Q ++ D G V+ + KI + ++ Sbjct: 143 VLVAGLPGDGKTYT--YVKPNLMQMNSSFIVTDPKGLLVREVGTMLKENGYQIKIFDLVN 200 Query: 243 A-RCAAWDLWKECLTQPDFDNTANTLIPMGTKED----PFWQGSGRTIFAEAAYLMRNDP 297 ++ ++ ++ D D ++ K D FW + + + D Sbjct: 201 LTNSDMFNPFRYMRSELDIDRITEAIVEGTKKGDREGEDFWNQAKLLLNRALLGYLYFDS 260 Query: 298 -----NRSYSKLVDTLLSIK-------------IEKLRTYLRNSPAANLV----EEKIEK 335 + S + D L ++K ++L L + A + Sbjct: 261 QVRHYEPNLSMVADLLRNLKRPNEKELSAVEKMFKQLEEKLPGNYACRQWELFNSNFEAE 320 Query: 336 TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLK 395 T + +++ + D M + + +F++ + T+ + Sbjct: 321 TRTGVLSIVATQYSIFDHDAVTNLIK-----TDTMEMDTWNTEKTAVFVAISE-TNKAYS 374 Query: 396 PVISMWLSIAIRGLLAMGE------------NRNRRVWFFCDELPTLHKLPDLVEILPEA 443 + S + ++ L + V F+ DE K+P E+L Sbjct: 375 FLASTFFTVVFDQLTHSADAIIQGEKKGYELKDLLHVQFYFDEFANCGKIPHFNEVLASI 434 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 R IQ+ +QL+ +YG A S+ + T F + ++ + G++ + Sbjct: 435 RSREMSIKIIIQAISQLDSLYGVPARKSMVNNCATLLFLGTNDEDTMKYFSMRAGKQTII 494 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL--- 560 + S G R +T + ++ L++ +I + V + Sbjct: 495 QTSYSEQRG---HRISGTTSRQAHQRDLMTPDEIARIGVDEALVFISKQNVFRDKKAMVS 551 Query: 561 ----------KYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEV 610 YQ + + + ++ ++ + M+ Sbjct: 552 NHPMKDRLANHYQDKTWYHYKRFMEEGAEFIDAVMTGQIPEDRIWAPDMSDYQAFLEENG 611 Query: 611 VSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISE 668 + E P N + S ++L E+ +LPP E Sbjct: 612 FDNTRQSAPETSVHNQVPVTNPEMP-SESPSQTSETSKKLVDMDTGEI-FELPPEDRE 667 >UniRef50_A7GI48 TraG/TraD family protein n=4 Tax=Clostridium botulinum RepID=A7GI48_CLOBL Length = 541 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 77/495 (15%), Positives = 168/495 (33%), Gaps = 44/495 (8%) Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQ--RGDMVVIYDRSGEFVKS--YYD 231 ++ + + + G GK+ +V YD GE + ++ Sbjct: 59 NIKLEEKIAFEGTVIIAPTGGGKTTSF--FIPNLLNPNLKGSIVAYDPKGELYEKTSWFQ 116 Query: 232 P---SID-KILNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGT----------KEDP 276 D + PL+ ++L ++C + A+TLI G+ Sbjct: 117 KNICGRDIVVFAPLEPSISCKYNLLEQCKDTTEVLQLASTLITNGSLAIELQTGKKTGGT 176 Query: 277 FWQGSGRTIFAEAAYLMRNDPNR--SYSKLVDTLLSIKIEKLRTYLRNSPAA-----NLV 329 W +F+ A + + ++ +++L T NS ++ Sbjct: 177 EWDNMATPLFSAALLYCKAQGLPVSTIENAFRLIIEKSLQELDTLFSNSTEDCRTQWDIF 236 Query: 330 E--EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSN 387 ++T SI+ LT +K + + + +K+ ++I S Sbjct: 237 NSVGDADRTIGSIKITLTTALKIFGD----KKICKVLSGTSTFNPAHLRKKSTCIYIISE 292 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + + PV++ + S +L + V+FF DE L L ++ R Sbjct: 293 ERRSSYVSPVMASFFSQLFDKVLDSYNKNSLPVYFFLDEFANLGMLNNMSVNCATVRSRE 352 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF-RSPSHKIAEFAAGEIGEKEHLKAS 506 +QS +QLE IYG+ A S+ + + T+ F K ++ + G + + Sbjct: 353 ISLNICLQSISQLEQIYGKDNALSILNNLKTKIAFSGLSDLKTLDYISQLCGNTQIQVCN 412 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 + +D + + L + DI+ L + + + P + Y T+ Sbjct: 413 TSIT------KDNTTKSYSYTTKKLFNKEDIRCLNEDDMLIVMHNKQPILDKKNIYYTQE 466 Query: 567 KVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPV 626 K + P N + + +++ + +LF+ ++ V + Q E Sbjct: 467 KYNSKI---KETPLKINLPTNNIIKNKSDEEKYINLFKENIKLKVEHKIKEQEENLILEG 523 Query: 627 SPAINDKKSDSGVNV 641 +++ ++ V Sbjct: 524 IKKLDNSSTNRLVEE 538 >UniRef50_B7KK02 Transfer complex protein TrsK-like protein n=4 Tax=Cyanothece RepID=B7KK02_CYAP7 Length = 569 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 105/578 (18%), Positives = 197/578 (34%), Gaps = 59/578 (10%) Query: 97 HDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE-VTGGRQLTDN 155 D+ + + + + L+ CL +++ + GK+ + GGR Sbjct: 11 ADEPFARAFDNMSRSISPGQGMMLLACLGFVGLLALMGKTGGKKGKLAKGYFGGRSEKSA 70 Query: 156 PKDVARMLKKDGKDSDIR----------IGDLPIIRDSEIQNFCLHGTVGAGKSE-VIRR 204 K VA + K + + +G P+ + + G G GK+ VI + Sbjct: 71 AKRVALKQMRHKKKNAVSVWVGTPTQNPLGKSPLYLPDAQRGMAVLGAPGTGKTVSVIDQ 130 Query: 205 LANYARQRGDMVVIYDRSG-EFVKSY-----YDPSIDKILNPLDARCAAWDLWKECLTQP 258 +A ++G ++++D + I P + + + Sbjct: 131 VAISVIEQGFPLILWDFKFPTQTSRLAAYAVKNGYELHIFAPGYSESEVCNPLEFLKDDT 190 Query: 259 D---FDNTANTLIPM-----GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLS 310 D A + T ED F+ +G + L R Sbjct: 191 DSMMARQFAEVMNQNFKRSGQTSEDGFFGPAGDQVTEAIMMLARGTEFPDLMMCQALASR 250 Query: 311 IKI--------EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGE 362 + +KL ++ S + + EKT SI A + Sbjct: 251 TDLAAQIIKHKDKLNPWVLASFGQLISSAQSEKTVSSILATANINFTRFMKADVLPAFCG 310 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWF 422 TI ++ + L + + + L P+I+ L + + ++ R+ ++ Sbjct: 311 KTTIPTFL------EGKQMLVLGLDREKRDVLAPLIAAILHLLVNRNVSR--KRSDPLFL 362 Query: 423 FCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF 482 DE+PTL+ LP L L E R+ G C V G Q+ Q+E +YGE A ++ T+ F Sbjct: 363 LADEVPTLY-LPGLHHWLNENREDGLCTVLGFQNLVQMEKMYGEDLARAIIGGCATKIIF 421 Query: 483 RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPD 542 A+ + +G KE + S G + + + ++ + L SD LP Sbjct: 422 NPQDQDSAKLFSDYLGLKEVKFKQK--SKGRSGGKASTNISEQIQTKPLFEASDFLQLPT 479 Query: 543 LTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAE-GRQMAS 601 C + + R K A +IP + ++ N +L E + Sbjct: 480 GRCILLN-----------PHFKRGKSA--YIPLLESIDLSNDYQTILKWSETRWDKVRGG 526 Query: 602 LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGV 639 L ++GED+ Q Q + P +K +S + Sbjct: 527 LQGRSTQTPITGEDLAARYQLAQNMFPGGKNKGEESEL 564 >UniRef50_B0T9Q1 TRAG family protein n=2 Tax=Caulobacter sp. K31 RepID=B0T9Q1_CAUSK Length = 658 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 90/599 (15%), Positives = 175/599 (29%), Gaps = 79/599 (13%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 + + + AF +AA++AL + ++ + + E T+ Sbjct: 58 WYGRFAARYQQAFDMAAMIALAAVFVPSMLLIGLTKSTRRAPR--EFGKDAWATEAHVRK 115 Query: 160 ARMLKKDGKDSDIRIGDL--PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVV 217 A+++ DG+ S +G + +++ + G +GK + Sbjct: 116 AKLVHGDGQISGRVLGRFNGKYLTYRGVEHAIIVGASRSGKGAG--HVVPTLIAWPQSAF 173 Query: 218 IYDRSGEFVKSYYDPSI----DKILNPLDARCAAWDLWKECL----TQPDFDNTANTLI- 268 +YDR GE D P D W+ E D N L+ Sbjct: 174 VYDRKGELWHITADHRKTFSHVFYFAPTDPNTVRWNPLFEVRKGPMEIADIQNVVGILVD 233 Query: 269 PMGTKEDP--FWQGSGRTIFAEAAYLMR---NDPNRSYSKLVDTLLSIKIEKLRTY---- 319 P+G K FW S F + D ++ +++ L++I L Sbjct: 234 PLGRKAGDLNFWDQSATDFFTAIILHVLYSEEDTKKNLAQVRRLLINIDP-TLHAMKHTK 292 Query: 320 ------------LRNSPAANLVEE--------------KIEKTAISIRAVLTNYVKAIRY 353 L + E E+ ++ A + Sbjct: 293 HRHRPDLHAPGGLARGADGKPIAEVHPEILLGATALDSMDERVKSNVLATCRASLSLWAD 352 Query: 354 L-QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL-- 410 + F+I D + + +I + L ++ ++ I L+ Sbjct: 353 PYVEYATSWSDFSIGDLVCS----ESPVTFYIITPQAHADRLAFLVRVFTRQTINSLMER 408 Query: 411 ----AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGE 466 + G + R+ DE P L LP L + E +G QS+ + YG+ Sbjct: 409 EHFDSRGRRKAHRLLLLLDEFPKLGSLPFLENAMGEMAGYGITAHLICQSFNDVFSKYGD 468 Query: 467 KAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 K +FD M+ A F + + G+ ++ S ST + Sbjct: 469 KTP--IFDNMHITATFATSEPTSIDKVIRRAGKALEMRESYSDPRSIFG-SSHRSTSQSE 525 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE-----------FIPR 575 + +++ ++ L D ++ + P ++Y P + R Sbjct: 526 HERYILTEDRVRELDDDQQFLFVNNTKPIRAEKIRYYDEPFFKARTGDYFHGVPAKYEQR 585 Query: 576 DINPEMENRLSAVLAAREAEGRQMASLF---EPDVPEVVSGEDVTQAEQPQQPVSPAIN 631 ++ A A L P PE + Q +P + Sbjct: 586 PGTADLPGPAQIDWLGVRAAEPAPAGLKGVVPPPAPEETDDGPQPAGDSGQGLHAPVSS 644 >UniRef50_A5CZ99 Type IV secretory pathway, VirD4 components n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZ99_PELTS Length = 655 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 89/584 (15%), Positives = 175/584 (29%), Gaps = 54/584 (9%) Query: 36 FFWILVGLVLWIKISWQTFVNGCIY-WWCTTLEGMRDLIKSQPVYEI-----QYYGKTFR 89 ++ V++ + + Y +W G + + + Sbjct: 11 LIALVTAAVIFTYPAACLVLGAAAYGYWRGGHRGAGLALTLAAAGGLLASAPFALAGAVK 70 Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG- 148 + V+A L VS G +G + E V G Sbjct: 71 GTGGFHPAAWLAGGALADMADRAGRLGVIAG--SLFGALAVSLGWGAKGMKHDEKHVHGL 128 Query: 149 --------GRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSE--------------IQ 186 G + KD+A + + G + R Q Sbjct: 129 KVAENAAKGTRRWAGDKDLAHVAEFGPPKEGKFGGGTLVGRLDRRIVRLQPEKCRPPLPQ 188 Query: 187 NFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGEFVKS-----YYDPSIDKILN 239 + C+ GAGKS I A + G+ +V+ D GE I N Sbjct: 189 HTCVVAGTGAGKSFSFAIPNAVAAAME-GESIVMTDPKGELACLLAPWLRERGYKVYIFN 247 Query: 240 PLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGTKEDP-FWQGSGRTIFAEAAYLMRNDP 297 + + W+ EC + A ++ K+ ++ + YL+R D Sbjct: 248 LAYPQWSSYWNPVMECRDDEEITAFATAIVLNAAKDSSGYFVMKEIQLLKALVYLLRADF 307 Query: 298 --NRSYSKLVDTLLSIKIEKLRTYLRNSPAA-NLVEEKIEKTAISIRAVLTNYVKAIRYL 354 +++ + +LLS +E L + L + E+ ++ + N + Sbjct: 308 PVEQAHLRSALSLLSWPVEALDERFARAFQEGRLSQTGYEEWRGAVSSNYENACSGLTAK 367 Query: 355 QG---IEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL- 410 G E + ++ +K + LKPV+S + R L Sbjct: 368 LGVVRAEPVARLLSRQEIDLSAMGREKAVLFCVL--PIASGHLKPVLSTFYYFFFRRLYG 425 Query: 411 ---AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEK 467 G F DE + ++P VE++ AR G F +Q QL+D YG Sbjct: 426 LAAEHGGKLPNPTRFILDEFANVGQIPGFVEVISTARSLGIKIQFILQGLKQLQDQYGGP 485 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY-SYGADPVRDGVSTGKDM 526 + ++ + F + + +GE +E+ + + + + Sbjct: 486 ESEAILSNCPVQLFLGGDDATTTRYFSQRLGEAAVYAETERRETTMPWNRLEIPKKSESV 545 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 R+ L+ ++ + + + PA + + P+ Sbjct: 546 TRRALMEPEELSGMDPMAAVALVRWTLPAYLQKVGWTELPQANE 589 >UniRef50_B0KAV4 TRAG family protein n=6 Tax=Thermoanaerobacterales RepID=B0KAV4_THEP3 Length = 610 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 84/604 (13%), Positives = 186/604 (30%), Gaps = 76/604 (12%) Query: 47 IKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSE 106 +I + + + L K E + + + ++ + S Sbjct: 3 FRIIVAVLILMLDFLFAPFLLIFPLYAKDYGFKEGLPKWEAY-------IKERPLSGISL 55 Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVT---------GGRQLTDNPK 157 L + + L + + +++ +E+ G K Sbjct: 56 LLKKEDIKTTWLWLQPAVFAALISVLFPIYGRRKRKTDELGLPEAAGQGQHGTARWRTEK 115 Query: 158 DVARML-----KKDGKDSDIRIG----DLPIIRDSEIQNFCLHGTVGAGKSE-VIRRLAN 207 ++++ + +G + D+ + + G +GKS +I Sbjct: 116 EISKTFTVWNTNNNPPKGGFVVGFNSSNSKAWLDTGDTHGLVIGATRSGKSRRIILPTIW 175 Query: 208 YARQRGDMVVIYDRSGEF----VKSYYDPSIDKIL----NPLDARCAAWDLWKECLTQ-- 257 + G+ +++ D GE K + IL NP R W+ E T+ Sbjct: 176 TLARAGESMIVSDPKGELHSYSFKYLKELGYKVILIDLRNPY--RGNQWNPVLEIATKLE 233 Query: 258 --------PDFDNTANTLIPMGT--KEDPFWQGSGRTIFAEAAYLMRNDPNR------SY 301 + + AN + DP W S ++ A + + S Sbjct: 234 IGDYSTASQNAWDIANIITNQQPHIGVDPIWPQSQESLTAALILAVASSAPHEAKHLGSV 293 Query: 302 SKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI-------EKTAISIRAVLTNYVKAIRYL 354 +++ L + E L Y R+ P + ++ SI ++ Sbjct: 294 YEILHRLGADGGELLDKYFRSVPREHPAASAYGVAALSEDRLRSSIFTGTAAQLRLWSDP 353 Query: 355 QGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 I T ++ +FI D ++ + ++++S A + L+ + Sbjct: 354 AVIW-----LTSDQDHELDAVGKEKAAVFIVI-PDERSTRNVLATLYISQAYQALVDLAN 407 Query: 415 NRNRR----VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 R V F DE L +PD + + A G ++ +Q +Q++ Y + A Sbjct: 408 KNGGRLAQRVNFVLDEFGNLPPIPDFDKKITVAAGRGMRFLLAVQDISQIKAKY-RELAQ 466 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 ++ + + + A +G+ G+ +E YS T + + + Sbjct: 467 TITGNCAVWVYILTTDLETARIISGKTGQYTI--RTESYSSQVKHTDYSHGTTEGLTGRP 524 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLA 590 L+ ++ P + PA+ P + + IP E++ + +V Sbjct: 525 LLLPDEVLRWPQDRALILQARQNPAILPLPDLSMWP-ASKDLIP-SALEELKKEVMSVPV 582 Query: 591 AREA 594 Sbjct: 583 WIPE 586 >UniRef50_Q7WZN4 Putative transfer protein n=1 Tax=Stenotrophomonas maltophilia RepID=Q7WZN4_STEMA Length = 641 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 80/594 (13%), Positives = 175/594 (29%), Gaps = 76/594 (12%) Query: 77 PVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGR 136 P + + + K+ + +V + I L + + + R Sbjct: 43 PALGEPLFAHFYAPWSWFSWQAKFYNSAPATFNNTYV-GFLSGAGIGLGAYVLTHGLKNR 101 Query: 137 QGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD-------LPIIRDSEIQNFC 189 + KQ + T ++ + + K + + +G L +R + ++ Sbjct: 102 KLKQHLDAHGTAHFAKRAEIEEAGLLPAEGKKGTGVFVGGWRDEKGVLRYLRHNGPEHVA 161 Query: 190 LHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV------KSYYDPSIDKILNPLDA 243 + +GK I N D VV+ D E +S Y + P Sbjct: 162 VVAPTRSGKGISIVN--NTLLSWPDSVVVGDLKEELFNGTAGWRSKYAKNRILKFAPSSP 219 Query: 244 RCA-AWDLWKECL-----TQPDFDNTANTLIPMGTKEDP---FWQGSGRTIFAEAAYLMR 294 ++ E D N ++ K ++ + + + Sbjct: 220 TSPTRFNPLAEVRLGTPYEVGDVQNITTVIVDPSGKGMDRLGHFEKTAQQFLVGLVLHVL 279 Query: 295 ---NDPN---RSYSKLVDTLLS---IKIEKLRTYLRNSPAANLVEEKIEKTA-------- 337 D + + D + + E + N+ V + K Sbjct: 280 YQVRDGEGRCANLGDVSDAMSNPQRAHTELYEEMMNNTHLNGQVHMAVAKQGRTQADRPE 339 Query: 338 ---ISIRAVLTNYVKAIRYLQGIEHNG-EPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 S+ + ++ + F + D M L++ + + Sbjct: 340 EEQGSVLSTAQSFFSLYDDPIVRGNVAHSDFQVMDLMNA----DDPITLYLCPSPENKDR 395 Query: 394 LKPVISMWLSIAIRGLLAMG---------ENRNRRVWFFCDELPTLHKLPDLVEILPEAR 444 +KP+I + S +R LL RR+ DELP+ KL L E L Sbjct: 396 MKPLIRLVKSQILRVLLRPSIQMVNGREVSPHKRRLLLLFDELPSFGKLEVLQENLAYMA 455 Query: 445 KFGGCYVFGIQSYAQL--EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEH 502 +G + +Q ++QL + YG + + + A F + A+ + G + Sbjct: 456 GYGIKAMLIMQDFSQLRSREAYGPE--EQIIANCHILAAFAPNRPETADILSKMTGTSTY 513 Query: 503 LKASEQYSYGA-DPVRDGVSTGKDMERQTLVSYSDIQSLP------------DLTCYVTL 549 +K S + VS + +++ L++ +I++LP + + Sbjct: 514 MKEKTTLSGKRMAAMHQNVSVSIEEQQRPLMTADEIRTLPGAKKTKEGRVIAPGEMLIFV 573 Query: 550 PGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLF 603 G + Y P+++ + +P + + + Sbjct: 574 AGTAVIRGVQSVYFLDPQMSKRWGLPYESPAWSAPAPLLAPDEDNPYLEDGHDQ 627 >UniRef50_A1WSU8 TRAG family protein n=2 Tax=Proteobacteria RepID=A1WSU8_VEREI Length = 758 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 79/538 (14%), Positives = 166/538 (30%), Gaps = 59/538 (10%) Query: 115 AAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKK----DGKDS 170 V+ALV + ++ ++G + E+ G + + V L + D K Sbjct: 62 FGVIALVASIGLPVLLFGLVGYAALTPKKRELHGSARFATRQELVKGGLLQPDQADDKYP 121 Query: 171 DIRIG--DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---F 225 I +G D + Q L +GK I + D VV+ D GE Sbjct: 122 SIVVGKQDKDFLLFRGQQFMFLAAPTRSGKGVGI--VIPNLLHYRDSVVVLDIKGENFEI 179 Query: 226 VKSYYDP--SIDKILNPLDAR--CAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDP 276 + P D A W+ P D N L P D Sbjct: 180 TSGFRAKCGQEVHKFAPDDENFQTACWNPLAYVRDDPRFRISDLMGITNILYPPS---DD 236 Query: 277 FWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIK-----IEKLRTYLRNSPAANLVEE 331 W + ++F A + + S + T+ ++ ++ ++ + E Sbjct: 237 VWASTAESLFLGLALYIMDTSKLHGSFNMATIKKMRVGLGCLKDEEAFMAHVKERKPFEP 296 Query: 332 KIE--------------KTAISIRAVLTNYVKAIRYLQGIEHNG-EPFTIRDWMRGVRED 376 E K SI + + F +RD Sbjct: 297 LSEDCITHLRSFAQTSDKLRNSIGISFDQPLGIFSDPITAKATASNSFDMRD------VR 350 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIA----IRGLLAMGENRNRRVWFFCDELPTLHK 432 +K +++ ++++ + L + + DE P + + Sbjct: 351 KKRMSIYVVVKPANIDKFGKFLNLFFQQLLVLNMDKLPQDDPSLKYQCLLLLDEFPAMGR 410 Query: 433 LPDLVEILPEARKFGGCYVFGIQSYAQLE--DIYGEKAAASLFDVMNTRAFFRSPSHKIA 490 + + + + + QS +Q++ +Y E A ++ M + + A Sbjct: 411 IAIIEKASAYMAGYNMRLLLVFQSKSQVKDRKLYDETGAQTMLTNMALQVVYAPRDDDDA 470 Query: 491 EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP 550 + + IG S+ GA + G S + +R+ ++ +++++ +++ Sbjct: 471 KDYSEMIGYMTEKGLSKSRQLGA---KSGRSESESDQRRAVMLPQEVKAIGMAKEIISME 527 Query: 551 GPYPAVKLSLKYQTRPKV-APEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV 607 PA+ + + P A +P+ P+ L+ + A + A E Sbjct: 528 NMPPALVDKIFWYQEPIFQARANLPQPAVPDQSELLNTIEPAPPSPVLHFAGAVEEQA 585 >UniRef50_D0T015 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0T015_ACILW Length = 641 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 82/607 (13%), Positives = 174/607 (28%), Gaps = 92/607 (15%) Query: 82 QYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQ 141 +G+ + + +Y + + L + L++ + F VV G + Sbjct: 26 PLFGRIYNPFKFLQWYLQYQVPTGQGLRPLLDKVVLKVLMLEGLAFLVVVITCGFITNSR 85 Query: 142 SENEVTGGRQLTDNPKDVARML---KKDGKDSDIRIGDLP-------IIRDSEIQNFCLH 191 +NE G ++ +M K K + +G ++ ++ Sbjct: 86 RKNENIHGSAKWAEESELQQMGLAPPKGKKGEGVIVGGFRNKKGQLQYLKHDGPEHVIGI 145 Query: 192 GTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF------VKSYYDPSIDKILNP-LDAR 244 +GK + + +I D GE +S Y +I +P Sbjct: 146 APTRSGKGVGL--VVPTLLSWKHSAIISDMKGELWLMTSGWRSKYANNICIKFDPAATEG 203 Query: 245 CAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYL-MRNDP 297 A+++ E D N L+ P G + W + ++ + + Sbjct: 204 SASFNPLGEIRLGTKYEISDTQNMVTILVDPEGKGLEDHWSKTSHSLLTAVVLYTLHHVK 263 Query: 298 NRS---------------------------------YSKLVDTLLSIKIEKLRTYLRNSP 324 ++ + L T + ++ T+ + Sbjct: 264 EKTLQIEDKKEKYRIASLGDVAHTLSNPDQPLDDLWNAMLYQTYGRDRNDQPCTHPVMAA 323 Query: 325 AANLVEEKIEKTAISIRAVLTNYVKAIRYLQG-IEHNGEPFTIRDWMRGVREDQKNGWLF 383 A ++ E S + +++ R + FT+ D M + L+ Sbjct: 324 VAKDMQNTPEDERGSTISTARSFLTLYRDPIVEANTSETDFTVGDLMDH----ENPVSLY 379 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLAMGEN----------RNRRVWFFCDELPTLHKL 433 + LKP+I + L++ +R L+ G R+ DE P +L Sbjct: 380 LVVRPGDKDRLKPLIRLMLTLILRVLVKDGMELDESGSAKAAHKHRLLMMLDEFPGFGRL 439 Query: 434 PDLVEILPEARKFGGCYVFGIQSYAQLE--DIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 + LP +G Q QL D YG + ++ + R + + A+ Sbjct: 440 KVFEDTLPYIAGYGIKAYLIAQDIEQLRASDAYGRE--ETISANCHVRVVYAPNKIETAD 497 Query: 492 FAAGEIGEKEHLKASEQYSYGADPVRDG-VSTGKDMERQTLVSYSDIQSLPD-------- 542 + + G K + S G V+ + L++ ++ L Sbjct: 498 WISKLSGTKTGHEEQISTSGARFGAVTGHVNKSIHAFARPLLTPDEVLRLKAPKKSTDGK 557 Query: 543 -----LTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGR 597 V + G P + + +N R ++ + + Sbjct: 558 KIVESGDMLVFVAGNNPVYGEQSLFFLDEVFVDRSKVKALNESQVVRKRLLIKSENRSDQ 617 Query: 598 QMASLFE 604 F Sbjct: 618 SQVKDFS 624 >UniRef50_B1Y1V4 TRAG family protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1V4_LEPCP Length = 677 Score = 248 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 91/605 (15%), Positives = 178/605 (29%), Gaps = 55/605 (9%) Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD--GKDSDIRI 174 ++A + ++ Q + G + + L I I Sbjct: 80 LLASMTASGIGLLLVLPGALLVAAQPRRRLHGDARFATTAEITRAGLLGGSTDGRPGILI 139 Query: 175 GDLP--IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSY 229 G I S + L +GK + + D VV+ D GE + Sbjct: 140 GRHRGQFISLSGQLSVMLSAPTRSGKGVGV--VIPNLLNWPDSVVVLDIKGENHAVTAGF 197 Query: 230 YDP--SIDKILNPLD--ARCAAWDLWKECLTQP-----DFDNTANTLIPM---GTKEDPF 277 P D AR W+ T P D P GT + F Sbjct: 198 RAKSGQRVYAFAPFDDQARSHRWNPLTAVRTSPMHRVGDLLAIGQVFYPNDGSGTSSEAF 257 Query: 278 WQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK--- 332 + R +F L+ P R+ +L+ S K LR +L + ++ K Sbjct: 258 FNDQARNLFLGLGLLLLETPALPRTIGELLRQ-SSGKGRALRDHLADQIRGRRIDSKELG 316 Query: 333 -----------------IEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRE 375 E T SI A + + + T D R Sbjct: 317 PALSDECIDALQRLLSNSENTLSSIVATFNAPLTIF-----ADAVVDATTSADDFRFEDV 371 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR----RVWFFCDELPTLH 431 ++ +++ + S +P+++++ S + + + DE T+ Sbjct: 372 RRQRLSIYVHIPPNRLTSARPLLNLFFSQLVSLNTQQLPEHDPSLTVQCLLVNDEFTTMG 431 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 ++ + + + +Q+ +QL+ +YG+K A + + F + A+ Sbjct: 432 RVGVITMSAAFLAGYNLRLLTVVQAMSQLDAVYGDKEARTFATNHGLQILFAPREQRDAD 491 Query: 492 FAAGEIGEKEHLKASEQYSYGADP-VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLP 550 + +G S +S P VS + +R+ L+ + + L V Sbjct: 492 EYSAMLGHFTERGTSRGHSRSLGPNGSRSVSVNESEQRRALLLPQEFKELGSERLVVIAE 551 Query: 551 GPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEV 610 P + ++Y P +P P ++ L + + + V Sbjct: 552 NCKPVLGEKIRYHRDPAFTSRLLPPPEVPALDMDLHLARVQQRWRLVEGDLAPDETVSIE 611 Query: 611 VSGEDVTQ-AEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISES 669 D+ Q + + + + D D A ++ +EE E+ Sbjct: 612 RLAHDINQLPDHFTELSAQQMADACLDFFSEKEAQPSGGTVEAAADEEGVLISNDVAREA 671 Query: 670 GEVVD 674 D Sbjct: 672 APTPD 676 >UniRef50_A4J358 TRAG family protein n=2 Tax=Desulfotomaculum RepID=A4J358_DESRM Length = 912 Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 89/576 (15%), Positives = 183/576 (31%), Gaps = 43/576 (7%) Query: 166 DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGE 224 + K + +P + +G GAGKS ++ G +V+ D GE Sbjct: 216 ERKIIRVNFEKVPDDTPKTAPHLLAYGGTGAGKSYSLVSGNIISGVSDGQSLVLIDPKGE 275 Query: 225 FVKSYY----DPSI--DKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGTKEDP- 276 K++ LN + + W+ EC + +TL +P Sbjct: 276 LFKTFAKWLNAMGYENVWALNFMTPQHSHRWNSVIECQDDAEISEMVDTLSINTVGPNPS 335 Query: 277 FWQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIE 334 ++Q + L++ D + + + ++TL + +EKL + + A + I Sbjct: 336 YFQLKAMELMEAIIGLLKGDFPVEQQHMRAINTLAAWPLEKLDARFKEAYQAERISATIY 395 Query: 335 KTAISI----RAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 + + + + A+ + ++ +K I Sbjct: 396 ERWRGVAKENYGYAVSNLTAVLKNLTTSPLAALMSEKEIDLSEIGRKKTALFLIIPTGGE 455 Query: 391 HASLKPVISMWLSIAIRGL-----LAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARK 445 LKP++SM+ + L + GE V DE+ + +P L EI+ AR Sbjct: 456 GVYLKPILSMFYKFLFKRLDKLAFTSPGERLPVPVRNVWDEMANVGVIPGLPEIISTARS 515 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR--SPSHKIAEFAAGEIGEKEHL 503 G + +Q+ QLE +YG A ++ T +A+ + +G Sbjct: 516 KGIHIMMILQTPTQLESLYGRDDAKTITGNCPTVMMIGIAPADRDLAKMFSEILGTAAVE 575 Query: 504 --KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 K SE + + K + + L++ S+I + C L P + Sbjct: 576 AYKVSEDRTVPGKHWFEFSKKTKTVIERPLMTMSEIFKIDPRYCIALLQWSNPVYLKKVG 635 Query: 562 YQTRPKVA----------PEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVV 611 + P+ E+IP + + E + E ++P Sbjct: 636 WTKLPQAKDIRRCGMLPIKEYIPARSFDISLPGDDILSSNNEELSLAFINQDEQEIPSQK 695 Query: 612 SGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGE 671 +P++ +K + E+ +++ P ++ E Sbjct: 696 VELSKVPGTKPEKEFISTKGEK--IISLGSFLNNWEKA--PPDNKQINGDTPTAVTNEIE 751 Query: 672 V-----VDMAAYEAWQQENHPDIQQQMQRREEVNIN 702 V A E + + ++ E + + Sbjct: 752 VTAPGAAPPTASEQISGDIVEITWNENKQEEMIQED 787 >UniRef50_C2HEY6 TraG/TraD family protein n=4 Tax=Enterococcus faecium RepID=C2HEY6_ENTFC Length = 634 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 75/544 (13%), Positives = 164/544 (30%), Gaps = 64/544 (11%) Query: 129 VVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRI--------GDLPII 180 + K NE G D+ + K + + G + I Sbjct: 81 LFVLYKTFDTKNTRPNEE-YGSARWGKAGDIRPFIDKKKDFNILLTKTESLSLSGRMKIT 139 Query: 181 RDS---EIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV----KSYYDPS 233 + +N + G G+GK+ + Q V+ D G + K + + Sbjct: 140 KRDNFNRNKNIVVVGGAGSGKTRF--YVKPNLMQMHSSYVVSDSKGLLLMETGKMFEEAG 197 Query: 234 IDK-ILNPLDAR-CAAWDLWKECLTQPDFDNTANTLI-----PMGTKEDPFWQGSGRTIF 286 I + ++ + ++ +K + D N LI P D FW+ + + Sbjct: 198 YKIKIFDLINRKATDYYNPFKYIRNEDDILKIINNLIKNTTDPDKKGGDGFWEKAETALL 257 Query: 287 AEAAYLMRND---PNRSYSKLVDTLLSIKIEK--------LRTYLRNSPA---------- 325 + + +R+ +++ + IE+ L + Sbjct: 258 MAIFSYLIQEVVEEDRTLGSVIELVRLADIEEDVPNFVSPLDVLFQELEQKDPQNFAVAQ 317 Query: 326 ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFIS 385 + + KT SI L + + + D + + L+I Sbjct: 318 YKIFKLSAGKTTKSILVSLGVRLAPFDIPSVRQLVSK-----DTLALDSIGDQKTILYIL 372 Query: 386 SNADTHASLKPVISMWLSIAIRGLLAMGEN-----RNRRVWFFCDELPTLHKLPDLVEIL 440 DT S + SM L+ +N V DE + ++PD +++ Sbjct: 373 L-PDTDTSFNFLASMMYQQLFDMLVYKADNVYKGRLPVHVRCILDEFANIGQIPDFEKVI 431 Query: 441 PEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEK 500 R +Q+ +QL+ +Y + ++ +T + E+ + +G++ Sbjct: 432 SVVRSREISTSVILQNISQLKTLY-KNTWETIIGTSDTFLYLGGMEQSTHEYISKLLGKE 490 Query: 501 EHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL 560 + + + GA+ + + L+ ++ SL C + + G +P + Sbjct: 491 TIEQRNISVTKGANG---SFNESFQKLGRNLMDPDEVASLKGQECILKIRGAHPFLSSKY 547 Query: 561 KYQTRPKVAP---EFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVT 617 + + +L +E + L D E + D Sbjct: 548 DITKHKNYKKLGDVTEKYMYTRDFSEQEEQLLPGQEELPYEPDELLLSDFDETLDESDDM 607 Query: 618 QAEQ 621 E+ Sbjct: 608 IDEE 611 >UniRef50_B5TTP2 TraN n=3 Tax=environmental samples RepID=B5TTP2_9BACT Length = 773 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 82/611 (13%), Positives = 183/611 (29%), Gaps = 94/611 (15%) Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYY--DPSIDKILNPL- 241 L +GK I + D VV+ D E + + + +P Sbjct: 24 VLLAAPTRSGKGVAI--VIPNLLNYSDSVVVLDLKLENFLLTSKFRAKNGQKVYLFSPFS 81 Query: 242 -DARCAAWDLWKECLTQPDFD-----NTANTLIP-MGTKEDPFWQGSGRTIFAEAAYLMR 294 D + W+ + +F + P G + FW + +F A + Sbjct: 82 EDLKSHKWNPFDTVSHDENFRVGEILAIGRSFYPVTGDAKTDFWNDNANNLFLGLALYLF 141 Query: 295 NDPN----------------RSYSKLVDTLLSIKIEKLRTYLRN-SPAANLVEEKIEKTA 337 + + + +++ + + + A N + T Sbjct: 142 ETEDLPVTMGEVLRQSSGKGKPIQDHIRSIIDERAQSDKPLSDTCLDALNRFLSSPDNTL 201 Query: 338 ISIRAVLTNYVKAI-RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 +I + T+ + + + F + D ++ ++ + K Sbjct: 202 GNIISTFTSPLTIFANPIVDAATSSSDFKLED------VRRQRMSIYFGVQPNRLGDAKN 255 Query: 397 VISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 +I+++ S+ I + L + + DE + K+ + + + + Sbjct: 256 LINLFYSLLIDVNLKTLPQQDSSLKYQCLVVNDEATAVGKVAKIADANSFIAGYNIRLLT 315 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 IQS QLED+Y + L + + + A + +G S+ S Sbjct: 316 IIQSIGQLEDVY-KTQTRGLVTNHALQIVYPPREQRDANEYSEMLGYFTFKAKSKGQSRS 374 Query: 513 -ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA-- 569 A S + +R+ L+ +++ L + + P + KY Sbjct: 375 MAWGQGGSNSENESDQRRALMLPQELKELSQDKEIIFMENTKPIMCEKAKYFNDSAFVDR 434 Query: 570 ----------------------------------PEFIPRDINPEMENRLSAVLAAREAE 595 P+ + ++E R++ + +AE Sbjct: 435 LKSVSPSMKAIKGFPTHKQLEKIAFEDLELSIPIPDLDVKLHKAKIEKRITEITTVEQAE 494 Query: 596 GRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDK---KSDSGVNVPAGGIEQELKM 652 ++SL P+ + E PQ + D+ + + A I + Sbjct: 495 QIDISSLVIPEF--KLDKTVFEDPENPQPEECLQVVDQFFGAVEWEEDTEAQNIVDDFFS 552 Query: 653 KPEEEMEQQL-------PPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHR 705 + E E + P +E+ VD + + EN + + Q V ++ Sbjct: 553 QVEASAENPIENLVAVDEPEQTENLIAVDDTEFSHDEMENLVAVDEPEQAENLVAVD-EP 611 Query: 706 ERGEDVEPGDD 716 E+ E++ D+ Sbjct: 612 EQVENLVAADE 622 >UniRef50_B4B5T3 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5T3_9CHRO Length = 641 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 93/505 (18%), Positives = 178/505 (35%), Gaps = 42/505 (8%) Query: 186 QNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDK-----ILN 239 + + G G+GK+ VI R A ++G +++YD+ G+ V+ + + + Sbjct: 139 RGILVIGAPGSGKTASVIDRAIESAMRQGHSILVYDKKGDQVRLHAALATRYGYSVEVFA 198 Query: 240 PLDARCAAWDLWKECLTQPD---FDNTANTLIPMG----TKEDPFWQGSGRTIFAEAAYL 292 P + + D +K + F++ +G + L Sbjct: 199 PGYSYSGVINPLDFVTGPEDTTMAGEIGKIFTSSSRTGESKGNEFFETAGEMLARGLVQL 258 Query: 293 MRNDPNRSYSKLVDTLLSIKIEK---------------LRTYLRNSPAANLVEEKIEKTA 337 + R +++ + + + ++ S + + + EKT Sbjct: 259 AKASNYRDLAQVYAFIQLPNFVERIYHSIYRPDKHPLKMNPWIAPSFSQLMSSKDAEKTV 318 Query: 338 ISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPV 397 I+A A + TI + ++ LF + + L P+ Sbjct: 319 AGIKATAEMVYSAFIQRDLLRAFIGKSTI------PIKLKEKQILFFQLDDERRTVLAPL 372 Query: 398 ISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSY 457 I+ L + I L+ R +F DE P++ +LP V + E R GG V GIQS Sbjct: 373 IAAALHLCIVSNLSQ--KRTNPFCYFLDEFPSIGRLPRTVNYVNEYRSNGGVPVLGIQSL 430 Query: 458 AQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY--SYGADP 515 QL D YGE+ ++ ++T F + AE + GE E + S SYG Sbjct: 431 EQLYDTYGERQGKAIASALSTHVLFYPGDYNTAEQYSKRYGETEVVIRSRSTGNSYGGSQ 490 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQ-TRPKVAPEFIP 574 + + + ++ L+S +I P C +T P + Y+ P EF Sbjct: 491 TSRSTNWSEQIHKKPLLSPDEILRFPQGECVITSPAYGSGKEALFPYKLKIPIEQREFKR 550 Query: 575 RDINPE-MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQP--VSPAIN 631 + ++ + L R ++ L E ++ ++ P ++ + Sbjct: 551 ASESEALWDSVIRPQLEQRAFNWAKLQELDEENLHLEITKRIEEAFRMLPMPGELADGVV 610 Query: 632 DKKSDSGVNVPAGGIEQELKMKPEE 656 DK + + Q LK P + Sbjct: 611 DKNNSDYKEQMKKIVAQTLKKLPID 635 >UniRef50_A8LU08 TraG family protein/type IV secretion system protein VirD4 n=19 Tax=Alphaproteobacteria RepID=A8LU08_DINSH Length = 666 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 83/616 (13%), Positives = 170/616 (27%), Gaps = 42/616 (6%) Query: 66 LEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLI 125 + G + V Q G ++ A + + Y+ + A ++ ++ Sbjct: 16 VTGAMGYTIASAVLTYQDLGFGAEIDFAYIAQN-YLAILDRRPEDAQLIHLIIGSFAAAG 74 Query: 126 TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEI 185 ++ + G+ +++ + +G L Sbjct: 75 MMLSLALSGSALTRF--------GQTHWQTSREMKANGFFGAPGTGFILGKLGAPGSRAN 126 Query: 186 -------QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD-----PS 233 + + G GK+ + V D GE ++ Sbjct: 127 YICSTVFPHALIVAPTGRGKTTGF--VIPNLLTWQGSAVTLDVKGECFEATARHRAAQGD 184 Query: 234 IDKILNPLD---ARCAAWDLWKECLTQPD-------FDNTANTLIPMGTKEDPFWQGSGR 283 P D R ++ D A + G Sbjct: 185 KVYRFAPTDWESKRTHRYNPLLRIYQLKDPARQQMELQLLATLFLQSDNDRVQGLLKGGI 244 Query: 284 TIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKI-EKTAISIRA 342 +F A L + ++ S ++ + R N + I + A + Sbjct: 245 DLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQKEYFARGHEVENRAAKLIFTRLASTNND 304 Query: 343 VLTNYVKAIRYLQ----GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 LT+YV + E + D+ +K +++ L P+I Sbjct: 305 TLTSYVSLLMTSGLDQWQNPAIDEATAVSDF-DFRTIRKKPFSVYLVVQPLMVKPLAPLI 363 Query: 399 SMWLSIAIRGLLAM--GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 ++ S + + G + V DE L K+P +VE + R + G Q+ Sbjct: 364 RLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVVTQT 423 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV 516 L++IYGE +L + + K E + +G+ + S G +P Sbjct: 424 IPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVVTRSQSIGKNPF 483 Query: 517 RDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRD 576 +G S E +L+ + + LP + + P ++Y + Sbjct: 484 -EGRSQSTRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAAQT 542 Query: 577 INPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD 636 + + + P S DV +A + +D Sbjct: 543 GELPFPEPGGGGPQGNLSLSMRAMPMTPPPDGPRGSEADVERAREVVDGQPSGQSDVVPK 602 Query: 637 SGVNVPAGGIEQELKM 652 V I +E + Sbjct: 603 KTTPVVQAVIAEEQRQ 618 >UniRef50_C8WMY2 TRAG family protein n=2 Tax=Coriobacteriaceae RepID=C8WMY2_EGGLE Length = 590 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 71/523 (13%), Positives = 146/523 (27%), Gaps = 92/523 (17%) Query: 128 FVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD------LPIIR 181 V++ G + G ++ D++I + +P Sbjct: 71 VWVAYANHLMGSAGTRKGEEHGSSRWATKAEMRAFADAKDSDNNIILTQNCALALVPRRF 130 Query: 182 D---SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDP-----S 233 D +N + G G+GK+ + Q + D + Sbjct: 131 DQKTDRNKNVMVVGGSGSGKTRYF--VKPNLLQMNCSYFVTDPKATLAAELREALESAGY 188 Query: 234 IDKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGTK-----EDPFWQGSGRTIFA 287 + +D A ++ + D LI + DPFW+ + R ++ Sbjct: 189 RVVEFSTIDMNGSAHYNPIAYVKNEADVLTFVECLIRNTSGDGEHSGDPFWEEAERLLYV 248 Query: 288 EAAYLMRND---PNRSYSKLVDTLLSIKIEK--------LRTYLRNSPA----------- 325 + +R+ L+ L + + L Sbjct: 249 ALVSYLVFHCPEADRNVPGLLTLLGLAEAREEDEDFKSPLDIVFEELERGACFTQVGARN 308 Query: 326 -----------------------------------ANLVEEKIEKTAISIRAVLTNYVKA 350 + KT SI +K Sbjct: 309 AFDAESRGFDDAAGAWRWIGVANPVSAQEDFALSNYKAFKTAAGKTLKSIIISCNVRLKP 368 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI---- 406 + + + + G D +S +DT+ + + ++ + + Sbjct: 369 LSVKEVSA----LLSRDEMSLGSMGDAGQKTCVFASMSDTNPTFNFLFTLLMWQTVDALC 424 Query: 407 -RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 L G + V F DE + +LP+ + + R +QS+AQLE Y Sbjct: 425 NTALERHGGSLPTHVHFVFDEFANIGELPNFEQTISTVRSRNISCSVIVQSFAQLEKRY- 483 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 + A + D +T F + K + + IG++ + S G + + Sbjct: 484 REGAEIIKDNCDTTLFLGGKAVKTNKEISEAIGKETVSAMTVNDSRGQG---SSTTRNRQ 540 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 + + L+ S++ LP V + G P + + P+ Sbjct: 541 IIERDLMQASEVGRLPRDEAIVLIAGANPIRDKKYRLEGHPRY 583 >UniRef50_C7CWB6 Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7CWB6_ENTFA Length = 753 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 108/737 (14%), Positives = 242/737 (32%), Gaps = 97/737 (13%) Query: 33 LFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNA 92 + I F + ++++ ++ I+ + +LEG+ + E GK F + Sbjct: 17 MLIIFGFVFTMIIFFGVNL-------IFNFILSLEGIIG-----RIKEYAATGKQFPVAF 64 Query: 93 AQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQL 152 + L ++ W F V+ + L+ ++ R + + G + Sbjct: 65 S--LSWFFIPKKLSGFWVYFCYGGVIGI---LLGKMLIKLYEIRIAFKDINLKTKGSERF 119 Query: 153 TDNPKDVARMLKKDGKDSDIR-IGDLPI-------------------IRDSEIQNFCLHG 192 T + + +K D + +P+ D + N G Sbjct: 120 TTKKELDQQYVKVALDDKEYEGSSGIPVATTVETVREKGKKVKKTFVYIDRKNTNSATIG 179 Query: 193 TVGAGKSEVI-RRLANYARQRG--DMVVIYDRSGEFVKSYYD-----PSIDKILNPLDA- 243 +GK+ + + + D V++ D G+ +K+ D LN +D Sbjct: 180 GTQSGKTSLFSYPFLDLIMRAKEKDSVIVNDLKGDMLKNTKDSFEKFGYDVYCLNLVDPT 239 Query: 244 RCAAWDLWKECL----------TQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM 293 ++ Q ++ + +L ++P W+ + ++ + Sbjct: 240 NGIHYNPLDLVKQAYLKGDTTKAQMLANSLSFSLYHNPNAKEPMWEEASISLLNALILAI 299 Query: 294 RNDPNRS----------YSKLVDTLLSIKIEK----LRTYLRNSPAANLVEEKIEK---- 335 + + +++ L + EK L T+ + P ++ ++ Sbjct: 300 CEIGIETKQTQIINMYAVTSMLEELGAYPDEKGNTALDTFFNDLPPTSVARKQYGTIKFS 359 Query: 336 ---TAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 T I +K Y F + D +K LFI D + Sbjct: 360 QGITRSGIFTGTMAKLKNYTYDAIARLTLDSDFNLEDL----GYGEKPIALFIVY-PDWN 414 Query: 392 ASLKPVISMWLSIAIRGLLAM----GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 S +IS +LS L G+ RRV + +E + + L + Sbjct: 415 DSNYSIISTFLSQVNEVLAERATLTGKGVKRRVRYLLEEAANIPPIDGLSRSMNVGLGRN 474 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 Y IQSYAQL+D YG+K + ++ + + S + A++ A ++GEK + Sbjct: 475 LIYHLVIQSYAQLDDKYGDKMSKAITAACGNQIYIMSDEYDDADYFAKKLGEKTVIAPDR 534 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS--LKYQTR 565 DP+ S G+ + + L++ ++++ L + V ++ Y Sbjct: 535 ----HGDPMSIDKSFGEREDGRQLLTANELRDLKEGEWVVDRTKMRRDLRGQKITPYPIF 590 Query: 566 PKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQP 625 V R + R E + + V +V ++ E Q+ Sbjct: 591 ANVNDGTEMRFHYEYLLPRFDGKKNLTELKLSKEQHSSIDLVDYIVKWDEYEVDENDQR- 649 Query: 626 VSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISES--GEVVDMAAYEAWQQ 683 P+ +++ + +++ ++ + P + E V + A++ Sbjct: 650 -IPSKEEQQQKRQEKEEERYMAEQVAAIDSVSLDTNIKPTLREQLGESVFEEFFLAAYKD 708 Query: 684 ENHPDIQQQMQRREEVN 700 + ++++ + N Sbjct: 709 NLSENEKEKLSTFTDEN 725 >UniRef50_Q7NIZ2 Glr2040 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NIZ2_GLOVI Length = 538 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 86/439 (19%), Positives = 156/439 (35%), Gaps = 34/439 (7%) Query: 135 GRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTV 194 G+ E R+ ++ K + + G+ I + + G Sbjct: 32 SASGRWAGAKEREHARRTARRQQEQRAKNKVALQINPGGRGERVIPVPHAERGVLVMGQP 91 Query: 195 GAGKS-EVIRRLANYARQRGDMVVIYDRS------GEFVKSYYDPSIDKILNPLDARCAA 247 G+GK+ I L A ++G +V+YD F + + ++ P + A Sbjct: 92 GSGKTYSAIDPLIRSALRQGFPLVLYDFKYPTQTRRLFAYARHLGYTVQVFAPGLPQSAV 151 Query: 248 WDLWKECLTQPD---FDNTANTL------IPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN 298 ++ ++ D A L ED F+ +G + + P Sbjct: 152 FNPLDLLVSAEDSETARQLAEVLNRNFKLAQQKGGEDAFFGPAGDQLAEAVLLTAKASPY 211 Query: 299 RSYSKLVDTLLSIKI-------EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 + L ++ E L ++++ S L EKTA SI A + Sbjct: 212 PDLLMVQSLLSLDQLPQRLQTAEHLSSWVKASYGQFLSAASSEKTAASIVATASALFTRF 271 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 Q P + D+ L + + + P+++ L + I+ Sbjct: 272 LKPQVARSFAGP-SAIDFDLS-----GKKLLVLGVDRTRRDVVLPLVATLLHMLIQ--FN 323 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 E R + DELPTL LP LV L E R+ G V G+Q+ AQLE YG++ A + Sbjct: 324 THERRTEPLVLALDELPTLF-LPALVNWLNENREDGLVSVLGLQNLAQLERTYGKETAQA 382 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 +F T+ F A++ + +G++ L+ S + G + + + + L Sbjct: 383 IFGACATKFLFNPGEKDSAQYISDMLGQESILQRSISRNTGKGGP--SRTHSESEKTRPL 440 Query: 532 VSYSDIQSLPDLTCYVTLP 550 + S + L C + P Sbjct: 441 LEASGLLKLGQGHCILLNP 459 >UniRef50_B6A5A8 TRAG family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A5A8_RHILW Length = 902 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 87/570 (15%), Positives = 179/570 (31%), Gaps = 58/570 (10%) Query: 19 IRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPV 78 + + +++ + +F G++++ + + G Q Sbjct: 119 LLHVRSVFSLIAHTALVFAAAYAGVIVYGVAFYLVATKAGEHAEIAGYYGNHLAAMYQAP 178 Query: 79 YEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQG 138 + ++ + Q + + F + A + Sbjct: 179 FGATDTAGIYQQPSRQTVLASLAGLAAAGALVGFPIGAAI-------------------- 218 Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGK 198 Q + GR KD A +D + + + ++R+ Q+ + G+ G GK Sbjct: 219 --QRRQRMIMGRARLATLKDAADFRLRDKRGIVLGLKQGLLLRNDGDQHVMVIGSPGQGK 276 Query: 199 SEVIRRLANYARQRGDMVVIYDRSGEFVKS----YYDPSI-DKILNPLDARCAAWDLWKE 253 S + ++ D SGE + D +L P ++ Sbjct: 277 SRGF--VIPTMMSFEGSQMVLDMSGELFEETSGYLKDKGYEVFLLAPGSKFTDGYNPLDL 334 Query: 254 CLTQP-----DFDNTANTLIPMGTKED--PFWQGSGRTIFAEAAYLMRNDPN--RSYSKL 304 T+P D L+P + D FW+ S R + + P+ +S S+L Sbjct: 335 VSTEPNQRITDLQKLTQMLLPERLRSDSSDFWEESARILLTAMLGFVLECPDTRKSLSEL 394 Query: 305 VDTLLSIKIEK--LRTYLRNSPAA---------NLVEEKIEKTAISIRAVLTNYVKAIRY 353 L S+ E+ + L N A + EK I A + + ++ Sbjct: 395 YRILNSMSDERKAIVQLLENYEAVLSDQTRMQLTKFAGRHEKLGEGIAAEIVAKLNFLQN 454 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 +I + ++ ++I ++ + + +ISM++ L+ +G Sbjct: 455 PLVEALT----SITS-IPIDTIRKRKMVVYIQADWNAMQIYERLISMFIQQMADKLVQLG 509 Query: 414 E--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 N V DE ++ ++ + P RK G +VF +Q AQLE +Y Sbjct: 510 PLRNGEHEVLMMLDEFGNGGRIDTVLTLAPLIRKNGVRFVFILQDGAQLERLYQRSGQKI 569 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 L + F + + A + G+ YS+ R S K L Sbjct: 570 LMGASTIKLFMNFQNQEDATAVSLAAGKTTEWVEQSSYSHRHG--RRQRSISKVPVSVDL 627 Query: 532 VSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 + + + + + + G + L Sbjct: 628 LPVNTLIMMKPEEAILQVTGMPLMRIMKLD 657 >UniRef50_B4W828 TraG/TraD family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W828_9CAUL Length = 512 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 75/455 (16%), Positives = 144/455 (31%), Gaps = 47/455 (10%) Query: 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK--SYYDPSIDKIL--NPLDA 243 + G +GK + V+ +D GE + + + L NP + Sbjct: 18 TLVTGGTRSGKGRG--HVVPTLLSWTGSVLTHDPKGELFALSAGWRATFSHALSINPRNP 75 Query: 244 RCAAWDLWKECL----TQPDFDNTANTLIPMGTKEDP--FWQGSGRTIFAEAAYLM---R 294 A W+ E L G D W + I + Sbjct: 76 ASARWNPLAEISPGPGELAQVQRLVAILSDPGGARDDEAIWDKAASEILEAVILHILYTA 135 Query: 295 NDPNRSYSKLVDTLLSIK------IEKLRTYLRNSP---------AANLVEEKIEKTAIS 339 +D +++ K+ + L + ++ L N A ++ S Sbjct: 136 DDADKTLLKVRELLADLDDVADVMVKTLHRPGPNGEPETHPFIKTAVKGYAAMHDRFRTS 195 Query: 340 IRAVLTNYVKAIRYLQGIEHNGEPFTIRDW-MRGVREDQKNGWLFISSNADTHASLKPVI 398 ++ +Y+K + E + D+ M + + L++ A+L+P++ Sbjct: 196 VQGTARSYLKWLA----GEDVERCLSASDFRMGDLMCAKAPVSLYVQVAPADAAALRPLV 251 Query: 399 SMWLSIAIRGLLAM------GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 + A + L A G ++ ++ DE P L +L + L +G +F Sbjct: 252 RLLFYAAAQSLTAHEKTDATGRPKHHKLLMLMDEFPLLGRLAFFEKSLRLMSGYGIKTMF 311 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 QS + + YG ++ D + F + + + G + S G Sbjct: 312 VAQSLNDIVETYGPH--NTILDNCHVYTAFAALDPLTQDKVSKLTGTVTETRTSRSGPAG 369 Query: 513 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 R VS + + L+ +I++LPD V + G P LKY R Sbjct: 370 LGAGRSSVSRSE--VERPLMEPGEIRALPDDDQLVFVAGFKPLRTKKLKYDRREPFRSR- 426 Query: 573 IPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV 607 + P+ R+ A + A P+ Sbjct: 427 -AKLPPPDQVARIDTPGRAPHPWAGRRALGENPEA 460 >UniRef50_UPI00016C4AF4 Agrobacterium virulence virD4-like protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4AF4 Length = 595 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 75/442 (16%), Positives = 144/442 (32%), Gaps = 46/442 (10%) Query: 187 NFCLHGTVGAGK-SEVIRRLANYARQRGDMVVIYDRSGE----FVKSYYDPSI-DKILNP 240 + G GK + +I + D VVIYD GE +S+ D +L+P Sbjct: 132 HLAAFAPTGVGKGTSLILPFLLGLIR--DSVVIYDPKGEACNLTAQSFRDRGYQVVVLDP 189 Query: 241 LDARC---AAWDLWKECLTQP-----DFDNTANTLIPMGTKE-DPFWQGSGRTIFAEAAY 291 ++ A ++ E DP W S A Sbjct: 190 YQVATKTPDGFNPLAMIDKDSPLVIDHARAMAAEMVVRTGNEPDPHWNDSAEAFIAAMIA 249 Query: 292 LMRNDP---NRSYSKLVDTLLSIKI--EKLRTYLRNSPAANLVEEK-------IEKTAIS 339 L NRS + L + ++ + ++ + ++ +K S Sbjct: 250 LTCLYGDGANRSLQAVRSLLTDPERMQAAIKVMVGDTAMSGMIARMGHQLATLKDKELAS 309 Query: 340 IRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 + + +++ + E + +K +F+ D + + Sbjct: 310 VLSTTNRHMRWLDTPAIANSTREST-----FDPLDLTKKPLAVFVVLPVDQMKAQAGYLR 364 Query: 400 MWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQ 459 + + +R +A G +V F DE +L ++ L + L R +G QS Q Sbjct: 365 LVMGSLLRACVAGGLQEQHKVHFVLDEAASLGEMDALEQALNIGRGYGIRIQLYYQSTGQ 424 Query: 460 LEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV--- 516 L+ +G + T+ FF AE+ + +GE+ S + G Sbjct: 425 LKKCWGVDGGDQVVLSNTTQIFFGVRDKDTAEYVSAMLGEETIWVESSGSNSGDSTSVNR 484 Query: 517 ---------RDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 G +TG + + L+ ++ +L + T PG P ++Y P Sbjct: 485 NDPGGSFSVSRGRNTGLQQQARKLLKPEEVVALDERTAITLTPGVKPIATTLVRYYEEPL 544 Query: 568 VAPEFIPRDINPEMENRLSAVL 589 R + +E L+++L Sbjct: 545 GNGAGRWRRLRIRVEVWLASIL 566 >UniRef50_C8W0M1 TRAG family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0M1_DESAS Length = 511 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 81/495 (16%), Positives = 162/495 (32%), Gaps = 36/495 (7%) Query: 166 DGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKS--EVIRRLANYARQRGDMVVIYDRSG 223 DGK + G P S + + G G+GK+ VI + + +VI D G Sbjct: 27 DGKIIRVIPGKAPKGMPSLAGHAAIFGGTGSGKTYSFVINNIISSVAD-EQSIVIIDPKG 85 Query: 224 EFVKSYYD-----PSIDKILNPLDA-RCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP- 276 E + KI N + W+ E + + + I K+D Sbjct: 86 ELAEITSAWLKSKGYEVKIFNLSNPAFSNRWNPILESVDDAEISEMSACFINNAAKDDSG 145 Query: 277 FWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEK-I 333 ++ + L++ + + + + V +L S E L + + + Sbjct: 146 YFVSKEIQLLEALVGLLKGEFPQEQKHMRAVMSLTSWDKEDLDVRFKTAYQTGKISATIY 205 Query: 334 EKTAISIRAVLTNYVKAIR---YLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 E+ S A + V + + E + ++ G +K + Sbjct: 206 ERWRGSASANYDHAVSGLSAKLKILTTEPLAALLSEQEINLGDVGQKKTALFCVLPVRGE 265 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNR----RVWFFCDELPTLHKLPDLVEILPEARKF 446 + LKP++S + + L + + NR V DE + ++P EI+ AR Sbjct: 266 NKVLKPILSTFYLFLFKRLYELADRNNRKLPVPVRMLLDEFANIGQVPGFSEIISTARSL 325 Query: 447 GGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR--SPSHKIAEFAAGEIGEKEHLK 504 G F +Q +QL+D+YG A ++ T + AE + +G+ Sbjct: 326 GIHIQFILQGRSQLDDVYGRDEAKNILANCPTILLLGVAPGDMETAEMFSSILGKVAVEG 385 Query: 505 ASEQYSYGADPVRDGV--STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKY 562 E V K + +L+ +I L L C + YP + + Sbjct: 386 KFESEDLTVPLVHHFKLAEKTKKTAKISLMEPDEIIRLHPLECIALVQWCYPLRMKKVGW 445 Query: 563 QTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQP 622 P+ + + + + + P + + + E ++ P Sbjct: 446 DKLPQAKEI------------KQLGEIPMVKLAPSRSFDVSLPSIKDESTSEVPSKKIVP 493 Query: 623 QQPVSPAINDKKSDS 637 ++ I ++ + Sbjct: 494 RKGGGEIIEEEWHEK 508 >UniRef50_Q6G2A8 Type IV secretion system-coupling protein virD4 n=20 Tax=Rhizobiales RepID=VIRD4_BARHE Length = 639 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 77/585 (13%), Positives = 162/585 (27%), Gaps = 54/585 (9%) Query: 32 CLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMN 91 F+ L+ S +N Y + L P+ + Sbjct: 75 ITFVSTAFFCITALYYIGSEIKRLNP--YVGQQGITWGYALKFMDPMVVFGVILGFVLLA 132 Query: 92 AAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQ 151 ++ F AA + L F I+ + + ++ V Sbjct: 133 IQVIITSPRTSNVKRAKKGIFGDAAWMNLKEAARIFPSNGQIVIGERYRVDQDNV-RNIP 191 Query: 152 LTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQ 211 K G + + L D + G K+ + Sbjct: 192 FAPGNKTTW----GKGGTAPL----LTFNLDFGSTHMIFFAGSGGYKTTS--TVVPTCLT 241 Query: 212 RGDMVVIYDRSGEFVK--SYYDP----SIDKILNPLDARCAAWDLWK--------ECLTQ 257 +V D S E + IL+P +++ + Sbjct: 242 YTGPIVCLDPSTEIAPMVKFARKKMGNRNVIILDPNSLLTKNFNVLDWLLDENIPRTRRE 301 Query: 258 PDFDNTANTLIPMGTKED---PFWQGSGRTIFAEAAYLM-----RNDPNRSYSKLVDTLL 309 + + + L+ E+ ++ + + D R+ L L Sbjct: 302 ANIVSFSKLLLSEKKSENSSAEYFSTQAHNLLTALLAHVIFSDKYEDSERNLKTLRAILS 361 Query: 310 SIKIE---KLRTYLRNSPA------ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN 360 + +LR +P+ + E ++T + + + + + Sbjct: 362 QSETAVVNQLRMIQETTPSPFIREMVGIFTEMADQTFSGVYTTASKDTQWLSLSNYADLV 421 Query: 361 -GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR 419 G F D +F++ A S + + + + ++ N +R Sbjct: 422 CGNDFASSDIAN------GKTDVFLNLPASILNSYPAIGRVIIGAFLNAMVTADGNYKKR 475 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 V F DE+ L + L E RK+G + QS QL + +GE A S F+ + Sbjct: 476 VLFVLDEVDLLGYMNILEEARDRGRKYGTSLMLFYQSSGQLVNHFGEAGARSWFESCSFV 535 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD-IQ 538 ++ + A+ + G+ S G + + ++ L+ + IQ Sbjct: 536 SYAAIKDLQTAKDISERCGQMTIEVTGTSKSRGLSLTKGSQNINYQ--QRALILPHEIIQ 593 Query: 539 SLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMEN 583 + + + G P Y R ++ P+ + Sbjct: 594 EMRQDEQIILMQGHPPLRCGRAIYFRRKEMLAATEKNRFAPQAKK 638 >UniRef50_D2L4F4 TRAG family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4F4_9DELT Length = 670 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 97/671 (14%), Positives = 201/671 (29%), Gaps = 117/671 (17%) Query: 23 SQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQ 82 S+I L ++FF +++ L + + + G I ++I Sbjct: 13 SKIRRRTLRWGYLFFMVVLALASMSRATQLVASHFGPQAALGQPWGQALGITWYAPWKIL 72 Query: 83 YYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQS 142 + + + + + Q F++ V L L+ ++ Sbjct: 73 SW-------HSWGVEHEAVKQAESQAQMLFLVPQFVVLGFALLGM-----------RKPK 114 Query: 143 ENEVTGGRQLTDNPKDVARMLKKDGKDSDI-----RIGDL---------------PIIRD 182 G +++ M DG+ + R + +R Sbjct: 115 AGRDIHGSAHWATEQEIQEMGLLDGRGVYLGGWVKRFEGISALYRRLCGYASETQRYLRH 174 Query: 183 SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDKI-- 237 + ++ L+ +GK + + D VV+ D GE + K+ Sbjct: 175 NGPEHVLLYAPTRSGKGVGV--ILPTLLSFPDSVVVLDIKGENWALTSGWRQSQGQKVLQ 232 Query: 238 LNPLDAR--CAAWDLWKECLTQ-----PDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEA 289 +P DA +++ E PD N A ++ P G W +G A A Sbjct: 233 FDPSDAGGGSVSFNPLDEVRLDTLLAIPDVQNIATMVVDPEGKGLQDHWSKAGFAFIAGA 292 Query: 290 AYL--------------------MRNDPNRSYSKLVDTLLSIK---------------IE 314 M D +RS L + +L + Sbjct: 293 LLHCLVMVRHREKRTATLHDLGTMLADESRSIDDLFEEMLKTDHAAKVKECFPKDPTGGD 352 Query: 315 KLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGI-EHNGEPFTIRDWMRGV 373 ++ T++ +S L K A + + + R + F ++D M Sbjct: 353 EIHTFIASSAREML--NKAPNEASGVVSTALVNLALYRDPVVALNTSRSDFRVQDLM--- 407 Query: 374 REDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE-------NRNRRVWFFCDE 426 + L++ + L+P+I + L++ I + E RR+ DE Sbjct: 408 -NHETPVSLYLVMSPADVNRLRPLIRLILNLIISRICEKMEFIEGVQVKPKRRLLLLLDE 466 Query: 427 LPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPS 486 ++ K+ + + + +G Y+ IQ+ QL D YG++ + + R + + Sbjct: 467 FTSIGKMEIVNKSIAYTAGYGINYLIVIQNIEQLNDTYGKENG--IKGNCHVRVAYAPNT 524 Query: 487 HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLP----- 541 + A + G+ + S S + L++ + LP Sbjct: 525 LETARELSEMTGKTTVVSEKTSLSGSRSGHLKNASVSLSETARPLLTSDECLRLPGLQKK 584 Query: 542 ------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAE 595 + + G + Y P + + P + L +A +EA+ Sbjct: 585 GDRVVKAGDVLIFVAGRSAIYGRQILYFLDPVFSKRV--KVPAPAKSDSLCPAVAGQEAK 642 Query: 596 GRQMASLFEPD 606 E + Sbjct: 643 PAMQTEQPEAE 653 >UniRef50_Q2XV30 TraG/TraD family n=6 Tax=Staphylococcus aureus RepID=Q2XV30_STAAU Length = 548 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 73/530 (13%), Positives = 160/530 (30%), Gaps = 68/530 (12%) Query: 184 EIQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI-----DK 236 +N + G G+ KS VI + + +V+ D SGE + + + Sbjct: 30 PNRNIFVVGGPGSYKSAGYVIPNVI---VKNQQSIVVTDPSGEVYEKTANIKRMQGFDVR 86 Query: 237 ILNPLDA-RCAAWDLWKECLTQPDFDNTANTLIPMGTK---EDPFWQGSGRTIFAEAAYL 292 ++N + + + D A +I W + + Sbjct: 87 VVNFKNFLASDRQNFFDYIDKDSDCSIVAELIIKSAGDSKINKDVWYKASVGLLNSLLLY 146 Query: 293 MRND---PNRSYSKLVDTLLSIKIE-------KLRTYLRNSPAANLVEEKIE-------- 334 R + R+ ++ + + K +L P + E E Sbjct: 147 ARYEFEPEKRTMGNIIKFIQNNKPNQDDEGSVELDNRFNELPKDHPARESYEFGFAVSEG 206 Query: 335 KTAISIRAVLTNYVKA-IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 +T SI ++ + + F +RD + +++ + Sbjct: 207 RTRASIILTFVADLRNYLDNEIRSYTSDSDFDLRD------VGLRKTIIYVMLPV-LGNT 259 Query: 394 LKPVISMWLSIAIRGLLAMGENR----NRRVWFFCDELPTLHKLPDLVEILPEARKFGGC 449 ++ + S++ S + L +G+ V F DE P + +PD E L RK+G Sbjct: 260 VQSLSSLFFSQMFQQLYRLGDENGARLPVPVDFLLDEWPNIGAIPDYEETLATCRKYGIS 319 Query: 450 YVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY 509 +QS +Q D Y + A ++ + ++ A++ E+G + Sbjct: 320 ITTIVQSISQAVDKYNKDKANAIIGNHAVILCLGNVNNDTAKYIKEELGNATVEFETSSE 379 Query: 510 SYGADPVRDGVSTGK--DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTR-P 566 + S+ K + L++ +I ++ + P + L Y P Sbjct: 380 GSSSGKDSRSKSSNKNVSYTGRALLNEDEISNMQQDKAILITKNRNPKIIKKLAYFKMFP 439 Query: 567 KVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSG------------- 613 + +I N + +++ + E + + Sbjct: 440 NLTETYIA-PQNEYKRKKNQSMIDKHNRLREEWDKKQERIKQQKLEEYKEEQRQKELEEE 498 Query: 614 -------EDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEE 656 ++ E + P + K +N ++LK K + Sbjct: 499 QQPQEEQQNKKVKESKDKNNEPQEDKKDEQQKINESKKAFYEKLKQKQAK 548 >UniRef50_B7RP33 TraG/TraD family protein n=2 Tax=Roseobacter sp. GAI101 RepID=B7RP33_9RHOB Length = 604 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 84/574 (14%), Positives = 172/574 (29%), Gaps = 69/574 (12%) Query: 42 GLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYM 101 GL + +I+ G + L + + + AA +L + Sbjct: 45 GLFMMWRIAMMALSTGAGFLLGWFLSPEAKEFR-----------RIVTLIAAGLLVFVAI 93 Query: 102 IWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVAR 161 + WSA LA+++ + L + LGR K + T G + + + Sbjct: 94 MSNGVLGWSAAWLASMLGFLGALG------YWLGRGVKALMDVPTTFGSSKWADGQHMNE 147 Query: 162 MLKKDGKDSDIRIGDL----------PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQ 211 I +G + ++ +GK + Sbjct: 148 KGLFGSD--GIILGSAFDDSVNGAVEKVFSYKGDRHLLTSAPTRSGKGVS--HIIINLLC 203 Query: 212 RGDMVVIYDRSGEFVKSYYDPSI-----DKILNPLD-------ARCAAWDLWK-----EC 254 ++ D GE + D ++P A + + Sbjct: 204 YQGSALVIDPKGENARITTDEREALGQEVMCVDPWGIATDAMGRVSARINPLDWIKLGDV 263 Query: 255 LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLM---RNDPNRSYSKLVDTLLSI 311 + A++L+ +K D FWQ + + + R V LL + Sbjct: 264 DATENAMLLADSLVQKNSKSDAFWQEEAKALIQGLILFVCFDAAFDGRRNLGTVRDLLLL 323 Query: 312 KIEKLRTYLRNSPAA--NLVEEKIEKTAISIRAVLTNYVKAIR---YLQGIEHNGEPFTI 366 + + A+ +L+ ++ ++ N + + + ++ E + Sbjct: 324 SGDDMIAMFEQMAASPHHLIASTGARSLQKEPKLMANVLASAQAETHMLDSARVRECLSE 383 Query: 367 RDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA-MGENRNRRVWFFCD 425 D+ +K +F+ AD + + + + AI + + + V F D Sbjct: 384 SDF-DFADLKRKPMTIFLILPADRLETFSRFLRLLVQQAITINARNIADKPKKPVLFILD 442 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E+P L +L + + FG Q QL IYG+ S A+F SP Sbjct: 443 EMPALGRLTMVEQAYGLMAGFGIQLWGITQDLCQLRRIYGQDY-ESFIANSGAVAYFGSP 501 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSY----------GADPVRDGVSTGKDMERQTLVSYS 535 AE+ + G S + G+ + + ++ L Sbjct: 502 DKTSAEYFSAMCGVTTVWNFSSAIATAFSSSSGGNGGSSSRSSTTTDNRAATQRKLAYPD 561 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA 569 ++ L D + + P + LK+ P + Sbjct: 562 ELMRLRDDQQLILIENTNPIMARKLKWYEMPDLR 595 >UniRef50_D1KAH2 TraG protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1KAH2_9BACE Length = 554 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 83/505 (16%), Positives = 171/505 (33%), Gaps = 47/505 (9%) Query: 104 CSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARML 163 L AF + A +A++ + + G E + + Sbjct: 16 MYLALIYAFPMLAALAVLPLGVVYLCFRAGEIGNGLFVLAVEAGAVYLFIKYKRKGKKEE 75 Query: 164 KKDGKDSDIR---IGDLPIIRDSEIQNFCLHGTVGAGKSEVIR-RLANYARQRGDMVVIY 219 ++ + G + + + + + G G+GKSE I L + + G V+Y Sbjct: 76 APKNPNTAVLRTEAGGVQLG--NPFRGVFVLGAAGSGKSESIAVPLLSEFVRMGFAGVVY 133 Query: 220 DRS---------------GEFVKSYY----DPSIDKILNPLDARCAAWDLWKECLTQPDF 260 D G ++ +Y +P+ +NPL+ R + Sbjct: 134 DFKFPTLAKDVQSFLNAKGSVLRHFYLDFNNPAASYRVNPLNPRYLP----NTSYAREYA 189 Query: 261 DNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRT 318 + L+ K+ FW S + + ++ + ++ + S L+T Sbjct: 190 QAIISNLMKESIKKPDFWTRSATDLLTACIWYLKEERPDICDLPHVLAMITSNDTALLKT 249 Query: 319 YLRNSPAANL---VEEKIEK----TAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR 371 +N A + + +E+ + L + I + + F+ D+ Sbjct: 250 LQKNVQTAQMTVSIYNAMERGADSQVSGVIGTLQGAIAQINTPELMF----LFSGDDFSL 305 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLH 431 V + Q L + S + P+ S+ +++A + M + + DE PT+ Sbjct: 306 DVNDPQNPIILTVGSYPTLTQTFAPLCSLVITVATKL---MNQPDKHPSFVLLDEAPTVF 362 Query: 432 KLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAE 491 +P++ + R V Q AQLED YG + A LF N+ + R S K AE Sbjct: 363 -IPNIEVLPNTGRSNKIATVIMCQDIAQLEDGYGREKADVLFASCNSHFYGRVASSKTAE 421 Query: 492 FAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCY-VTLP 550 + + G+ + + + + ++ + ++ S+ +L + + Sbjct: 422 ILSKQFGKADKVYITSNEGRNTRKFGKTFGRSETIQERDVIKPSEFLNLQVGEFAGLAVE 481 Query: 551 GPYPAVKLSLKYQTRPKVAPEFIPR 575 P + K RP+ A P Sbjct: 482 SNKPTFRTRFKQAQRPQPAELKKPD 506 >UniRef50_Q6X3G3 TraG n=2 Tax=Gammaproteobacteria RepID=Q6X3G3_PSEAE Length = 840 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 61/477 (12%), Positives = 142/477 (29%), Gaps = 56/477 (11%) Query: 148 GGRQLTDNPKDVAR--MLKKDGKDSDIRIGDL---PIIRDSEIQ---NFCLHGTVGAGKS 199 G ++ + L GK +G + P D + + G+GK Sbjct: 373 HGSARWGTVDEIRQGGHLVAPGKPGGFALGRVSDAPAGLDQRFRFTGHVVTVAPTGSGKG 432 Query: 200 EVIRRLANYARQRGDMVVIYDRSGEFVKSYYD-----PSIDKILNPLDARCAA---WDLW 251 I + ++ D GE +++P +++ Sbjct: 433 --IGAVIPNLLDYPGSALVLDVKGENAAVTARARRALGQAVHVVDPFAVNGDGAAAFNVL 490 Query: 252 KECLT-----QPDFDNTANTLIPMGTKEDP-FWQGSGRTIFAEAAYL---MRNDPNRSYS 302 + A+ L+ K + F+ S + + + R+ Sbjct: 491 DRLDVWNPDCVSESATLADCLVIGSEKAESKFFDESAKNLLQGLMLHVVSLDEPERRNLG 550 Query: 303 KLVDTLLSIKIE--KLRTYLRNSP---------AANLVEEKIEKTAISIRAVLTNYVKAI 351 +L L + + E L + AAN + +K + + + + Sbjct: 551 ELRRLLTTGEGEFFDLLGMMAADETAAFGIPARAANTIMGMADKARGDVISTARTHTAFL 610 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 + + D+ + + +F+ A+ + +++ I + + Sbjct: 611 DDPRIAA----ALSRSDFDLSAIKSEL-MTVFLVMPANRIGPNARFLRLFVGSIIAAITS 665 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 RV F DE L + + + + R +G + IQ +QL+ Y + + Sbjct: 666 SNVQPAHRVAFLLDEFGQLGYMKQIEDAVSLLRGYGLAFWVFIQDLSQLKGTYPK--WQT 723 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGAD----------PVRDGVS 521 ++FF + + A++ + +G+ +E + Sbjct: 724 FLANSA-KSFFGTDDYDTAKYISDSLGKATIEFETENTGKNSGSGLSGGGGSMNRGKSTG 782 Query: 522 TGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 T + + L++ ++ L V + G P + L Y + A F + Sbjct: 783 TSQQFTGRELLTPDEVMRLGPEHPIVLVRGERPYLLDRLNYLADAEYAGLFDANPYH 839 >UniRef50_A6ASA7 Conjugal transfer protein TraK n=2 Tax=Vibrio harveyi RepID=A6ASA7_VIBHA Length = 592 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 83/560 (14%), Positives = 166/560 (29%), Gaps = 75/560 (13%) Query: 89 RMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG 148 + + + + V+ V++ I L F + I+ Q+ E Sbjct: 44 HLTYHSLFDQWQAYRHNPDIKKFLVIGVAVSIAITL--FPTLMAIVIAIASQEKEEIHGS 101 Query: 149 GRQLTDNPKDVARML---KKDGKDSDIRIGDLPIIRDSE-------IQNFCLHGTVGAGK 198 + TD + + K K I +G +P R Q + +GK Sbjct: 102 AKFATDMDLANSGLFPDPKAKNKKPSILLGKMPTGRFKGRFIELESSQFVEVPAPTRSGK 161 Query: 199 SEVIRRLANYARQRGDMVVIYDRSGEFV--KSYYDPSI---DKILNP------------L 241 I + D +V D E + + + P Sbjct: 162 GVGI--VIPNCVTYPDSLVCVDIKFENLVKSGGFRQQCGQAVFLFAPDGYAIDEQARERE 219 Query: 242 DARCAAWDLWKECLTQP-----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND 296 + R W+ + P D N AN+L P+ + W +F + M + Sbjct: 220 ELRTHQWNPYDYVRRSPVFRVSDVLNIANSLYPISGDKGDIWNELAGKLFKGLSCWMLDT 279 Query: 297 PNRS--YSKLVDTLLSIKIEK-LRTYLRNSPAANLVEEKI-----------EKTAISIRA 342 + + L L I+ LR ++R + V + E+T S+ + Sbjct: 280 ESITGITPSLPYVLKLGGIDGGLRAWMRREIKNDYVSDDARFEFNNCLSMAEETYSSVES 339 Query: 343 VLTNYVKAIRYLQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMW 401 L + + +G F R+ +K +++ + + +++ Sbjct: 340 NLLSPLAIFSDRVTAAAVSGSDFDFREL------RKKRMTIYVGCQPANLKNFGKLFNLF 393 Query: 402 LSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSY 457 I R L + + DE L ++ + + + + ++ Q Sbjct: 394 FEQLISENTRTLPEHDDTLKYQCLGLLDEFTALGRVKQIEKAISYTAGYNLRFLTIYQDE 453 Query: 458 AQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIA-EFAAGEIGEKEHLKASEQYSYGADPV 516 QLE++YG + A ++ + + + +G K K S G Sbjct: 454 GQLEEVYGRENAKNIRKNHGVKVVYPPKEVDDNVRRLSDTLGTKTVKKRKVSRSTGKGSS 513 Query: 517 RDGVSTGKDMERQTLVSYSDIQSLPDLTC----------YVTLPGPYPAVKLSLKYQTRP 566 R +T +D ++ L+ +I L + P + + Y P Sbjct: 514 R---TTSEDELKRALMMPHEIVELGFEKHPIAKELGIKTLILKENQRPFIAEKIIYFEEP 570 Query: 567 KVAPEFIPRDINPEMENRLS 586 A + N RL Sbjct: 571 VFAERVKYSEANIPEIPRLK 590 >UniRef50_B2TSI9 TraG/TraD family protein n=3 Tax=Enterobacteriaceae RepID=B2TSI9_SHIB3 Length = 620 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 74/608 (12%), Positives = 181/608 (29%), Gaps = 86/608 (14%) Query: 19 IRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPV 78 ++ F++ ++ ++ + + G ++ + L+ ++ + +S Sbjct: 1 MKTFNKSQSVFIFAVMLVAAWFAGSFIFF---------VLYFSQIKNLKPLKAVFRSIDA 51 Query: 79 YEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQG 138 Y + + + ++ + + + A VAL + ++ + Sbjct: 52 YRMDIFTDSLTLSV---------------VTTDIRVLAFVALGAGFVVSLIIPVAALIKL 96 Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLP---IIRDSEIQNFCLHGTVG 195 ++ EN R T N + DG + D I + IIR + Sbjct: 97 NEKKENIFGDARFATINDIRESNSFTLDGDEKDGIIVGIKDKKIIRYVGAAFSAMGAGTR 156 Query: 196 AGKSEVIRRLANYARQRGDMVVIYDRSGE------FVKSYYDPSIDKILNPLDARCAAWD 249 AGK I + + V+I D E ++ +P ++ Sbjct: 157 AGKGAGI--VITNLMKYWWSVIILDPKRECFNITSLIRKVILGHEVYKFDPFSPVTHRFN 214 Query: 250 LWKECLTQP-----DFDNTANTLIPMGTKEDP---FWQGSGRTIF--AEAAYLMRNDPNR 299 +N + + P T + + +F A ++ Sbjct: 215 PLYYVSMGTSEGFNQLENLSLIIYPYKTDGADAGSYLNKTAGGVFKSYAVALWFMIKNDK 274 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLVE----------------------------E 331 + K +D + K+ + +L+ E Sbjct: 275 AGLKTLDIEPVFSMSKINQLFERAEPEHLLSFMNDIRSELRGKDKTLADIGVAGLKAFIE 334 Query: 332 KIEKTAISIRAVLTNYVKAIRYLQGI-EHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 +KT +++ N + +G F +R +K ++ + D Sbjct: 335 MEDKTKAQLKSNFLNGLSPFANPNVANATDGNDFDLRQ------VRKKRMTIYFCISGDN 388 Query: 391 HASLKPVISMWLSIAIRGLLAMGENR----NRRVWFFCDELPTLHKLPDLVEILPEARKF 446 + + +++ + I+ L F DE P++ + + + Sbjct: 389 ARLAEKITNIFFQLGIQVNLEKMPTDDPEIKHDCLFLLDEFPSIGAVDYIKSKSGLIAGY 448 Query: 447 GGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS 506 + Q +QLE+IY + +L + + + K A + +G + S Sbjct: 449 KLKLLIVYQVGSQLEEIYSYAGSKTLLASAPCKIVYSASDVKDARELSEAMGTRTVTIGS 508 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 + S S +++ + LV+ +++ +L + + G P Y Sbjct: 509 KSKSRSRGGT--SRSESENLIERPLVTTNELLTLKFSEEILAMKGENPIRCEKAFYYLHE 566 Query: 567 KVAPEFIP 574 +F+ Sbjct: 567 YFFGDFVK 574 >UniRef50_C0BU69 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BU69_9BIFI Length = 611 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 66/588 (11%), Positives = 158/588 (26%), Gaps = 98/588 (16%) Query: 62 WCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALV 121 TL + + G T + +++ D F +++ + Sbjct: 8 AIKTLTILAGFWLADLAATRVQAGITAGESVERIM-DDMTTMLQHPTALGFDRTSLLCGL 66 Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 + ++ + G +++A D + + + Sbjct: 67 GGACAVGLFHLYRWSTSQRNWRDGEEYGSARWSTSREMAPYTDNDTRQNLQMTATEGLSL 126 Query: 182 D----SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS----YYDPS 233 D N + G G+GK+ + + D GE Sbjct: 127 DAQATRRNLNTTVIGGSGSGKTAT--HVIPNILKGSMNYACTDPKGELYAKTSGKLKKMG 184 Query: 234 IDKI-LNPLDARCA-AWDLWKEC---LTQPDFDNTANTLI-------PMGTKEDPFWQGS 281 L+ +D ++ + ++ P + D FW S Sbjct: 185 YTVKQLDLVDLTSETKFNPMRYIDPDKPDVAIMRLVTNIMDNTNGSTPKEHQTDDFWTKS 244 Query: 282 GRTIFAEA---AYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSP-----------AAN 327 R++ Y + +D + + + +R L S A Sbjct: 245 ERSLLTALTAFVYYLPDDILKDCLNIDAGQTLNAVADMRDLLEASEQDETKESQVDAVAR 304 Query: 328 LVEEKIEKTAIS--------IRAVLTNYVKAIRYLQGIEHNGEPFT-------------- 365 E E+T L + + L+ PFT Sbjct: 305 TATEIYEETRAEWNRDGADHDDPDLREAWRLAQGLKFAARQYRPFTQGAGETKKGIIISL 364 Query: 366 -----------IRDWMRGVRE------------------DQKNGWLFISSNADTHASLKP 396 +R+ + +F++ D + Sbjct: 365 GVRLAPLTVGPVREILSDDNLGIDRIGGYADEHKGGYKHPNGKTAIFLAL-PDEDPTFNF 423 Query: 397 VISMWLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYV 451 + +++ ++ + F DE + ++P+ +++ R Sbjct: 424 LAAIFYQCLFDSIIRRCRTYPGECLATPLHCFLDEFANVGRIPNFDKLIATIRSRKVSVS 483 Query: 452 FGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY 511 +Q+ AQL+ +Y + + ++ ++ F E+ + +G++ + S Sbjct: 484 IILQTIAQLKTMY-KDSWETIVGNCDSVLFLGGNEQSTTEWLSKLLGKETIDIRTTSDSK 542 Query: 512 GADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS 559 G V +T + L++ ++ L + C +L G +P + Sbjct: 543 G---VSGSHTTNYQRTGRELLTPDELAQLDNDKCIYSLRGLHPFLSRK 587 >UniRef50_B4WV81 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WV81_9SYNE Length = 616 Score = 235 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 101/590 (17%), Positives = 199/590 (33%), Gaps = 56/590 (9%) Query: 119 ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSD-----IR 173 A + L+ R + ++ GR + K AR L K +++ +R Sbjct: 27 AATLMLMMALAGGLSFARIATAPKKQKLGTGRFASRAEKARARQLAKKQRNTGGLEMSLR 86 Query: 174 IGDLPIIRDSEIQNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVIYDRSGE----FVKS 228 +GD+ I +E G G+GKS + RG +++D G + Sbjct: 87 LGDVAIPYANES--VLFVGAPGSGKSATVGDPGLMEIIDRGLPAIVFDAKGSREDSITRR 144 Query: 229 YY----DPSIDK-ILNPLDARCAAWDLWKECLTQPDFDN---TANTLI-------PMGTK 273 + + ++ P + + + D AN L P + Sbjct: 145 FAPLAGRAGYNVGVIAPGKDYSDCLNPLEFIRSPIDASRSLHLANILEKNTAGFNPNKSG 204 Query: 274 EDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKI----EKLRT------YLRNS 323 + F+Q +G I L + P + + + + + L + Sbjct: 205 QGDFFQRTGIGIVQAGIMLSKLLPQSDLMTVSEIINRPDLVGRIKGLMESGNAPAWTLKQ 264 Query: 324 PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLF 383 + E+ EK + + + + + P T+ + LF Sbjct: 265 FGQMVSSEESEKQLVGMIVTAQSIFERFITADLVPSFCGPSTV------PLKMDGKQILF 318 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEA 443 + + +T ++ P+I+ + + I + E R + F DELP L+ LP + + + Sbjct: 319 LQVDEETQDAVLPLIAAMIELLIAHNFS--EPRKNILGLFLDELPLLY-LPKIAQYVNLL 375 Query: 444 RKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHL 503 R G G+QS +Q+ + YG+ A S+ FF + A+ + IGE + + Sbjct: 376 RSAGLVAFLGVQSLSQMRETYGKDMATSIMTGCRNTLFFNPNNVDTAKEVSARIGECDRI 435 Query: 504 KASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS--LK 561 + S + + + ++ L+S +I + PG + Sbjct: 436 HHTWSRS---GALLIKPTRNQHRQKGPLLSPDEINRFGKGKFVMFAPGYQTQAGEQASIP 492 Query: 562 YQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQ 621 RPK+ I + + R E R+ + + DV + + E Q E Sbjct: 493 ILARPKLNHAHIKQQAIA--GQVWDSKSQQRLTERRKQDADYISDVEQALL-ERREQVEV 549 Query: 622 PQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPE--EEMEQQLPPGISES 669 PV+ ++ A + +E E EE+ + P +E Sbjct: 550 LLPPVTDETEADATEREAQPTADAVAEEAVEAKEVIEEIAAKAPAPATED 599 >UniRef50_C3WQ29 Conjugal transfer protein traG n=7 Tax=Fusobacterium RepID=C3WQ29_9FUSO Length = 709 Score = 235 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 91/684 (13%), Positives = 212/684 (30%), Gaps = 102/684 (14%) Query: 21 MFSQIANIMLYCLFIF-FWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVY 79 M+ + ++++ F F+ ++ + S + + + + +Q Sbjct: 1 MYIIVIALIIFLEIKFDFFTKNFKKIFKEKSTEKIIVFSVLIFIIIFSASLGS--NQIAK 58 Query: 80 EIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAV--VALVICLITFFVVSWILGRQ 137 ++Y K + + Y+ + L + + + L+ I + + IL Sbjct: 59 FLKYNPKYVGKPLFKNFYGPYLYFKFLFLKVSSKNPTLNNIYLINTAIFCLLSTPILLYM 118 Query: 138 GKQQSENEVTGGRQLTDNPKDVAR--MLKKDGKDSDIRI---------GDLPIIRDSEIQ 186 K+ + T G + ++ GK +D I G + I ++ Sbjct: 119 AKKSDNDLDTHGSARWATISEWEEAGLISPPGKFTDGVILGIVKKRLFGKVRYIIENLKT 178 Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF------VKSYYDPSIDKILNP 240 + L AGK + + V + D GE + + P Sbjct: 179 HIALIAPSRAGKGTGV--IIPTLLNWLGSVFVLDMKGENYQITAGYRKHALKQTILKFKP 236 Query: 241 LD-ARCAAWDLWKECL-----TQPDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLM 293 +++ E D A+ L P K+ W S +F + Sbjct: 237 YGLEDSISYNPLAEVRIGTAYEVKDATIIADILTDPGEGKKRDHWDMSATALFIGLILHV 296 Query: 294 RNDPNR-----SYSKLVDTLLSIK------------IEKLRTY----------------- 319 R ++ +VD L S + L Y Sbjct: 297 LYMRRREGKIGTFGDIVDFLTSTDKTLEQNFIDLMEYKHLEDYSVWNDIYDSSQMKGINP 356 Query: 320 -----LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGV 373 + + A + K E+ S+ + + + + + + F I+D M Sbjct: 357 GTHPIVARTAAE--ILNKDERERASVISTVMAKLSLFKDPIIRKNTSRADFRIKDLMD-- 412 Query: 374 REDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL------AMGENRNRRVWFFCDEL 427 + +I A+ +L ++ + ++ I L + ++ F DE Sbjct: 413 --YKNPVSFYIVVEAEQMDTLSLLLRILVTQTIGILAPEMDFSSDKPIHKHKMLFLMDEF 470 Query: 428 PTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP-- 485 P +P + L +G + Q+ Q++ YG S+FD T F+ Sbjct: 471 PAFGTIPLFEKALAYIAGYGMKALIIAQALNQIKKNYG--DRNSVFDNCATTVFYSPTPL 528 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + + + +G+K + Y + + + + L++ ++++ Sbjct: 529 DTETPKQISEMLGDKTIKVKNRSY---KAFQIGSSNISESNQARRLLTPEEVRNKVAGKW 585 Query: 546 -YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLA-----------ARE 593 +++ G YP + + L+Y + P+ + + +L+ +E Sbjct: 586 NIISVTGLYPRIGVKLEYFREKYFKSKIHKVYGIPKTDYLTNEILSDIKTINTTTDFMKE 645 Query: 594 AEGRQMASLFEPDVPEVVSGEDVT 617 E ++ + E + E++ Sbjct: 646 EEDNKLDKRIREEFLENIENENIE 669 >UniRef50_B6JK53 Trag protein n=2 Tax=Bradyrhizobiaceae RepID=B6JK53_OLICO Length = 718 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 64/545 (11%), Positives = 160/545 (29%), Gaps = 52/545 (9%) Query: 100 YMIWCSEQLWSAFVLA-----AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTD 154 + + ++ + A++ T + G + Sbjct: 62 FFVIAWRHFYNRLLFPGTQLEALIRAGYAAATVGAIGLAGALFAVINRRQMPYGAARFGT 121 Query: 155 NPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGD 214 + + L + + R E + + G +GK + Sbjct: 122 LMEAAKQGLTAKRGIVLGTLSGATL-RSDEPAHILVVGPSRSGKGTGF--VLPNGYLWQG 178 Query: 215 MVVIYDRSGEFVKSYYD-----PSIDKILNPLDARCAAWDLWKECLTQP----DFDNTAN 265 V +D E ++ + + + +P ++ D A+ Sbjct: 179 SAVFFDPKRENFEALAEHRAAMGNKVFMFSPGSNDTHRYNPLDFVRRDERMATDCLVVAS 238 Query: 266 TLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDP-----------------NRSYSKLVDTL 308 +IP K D W G+GR + + + P + S ++ + Sbjct: 239 FVIPE--KADDTWAGAGRLLLSALIGYVLASPLIAGAQHMRTVARMTTTGKDISSVLRAI 296 Query: 309 LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRY-LQGIEHNGEPFTIR 367 + + + L ++ +S + E +T S + + L F IR Sbjct: 297 VKTERQHLPAWVVDSFNQYIALEP--ETRNSAVFNVNMAMSLWNNGLISAATETSDFDIR 354 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM--GENRNRRVWFFCD 425 + ++ +FI + +P+I + ++ G++ +V D Sbjct: 355 EL------RRRPMTIFIGCTIAELSIFRPLIRILFQQIHDLMMVKIPGDDEPHQVLLMLD 408 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E + ++ L+ + + +G +Q AQL+++YG + + F + Sbjct: 409 EFYHVGRMDSLISKITISAGYGFRMAIVMQDIAQLDELYGRNTRITTVSGSQIKLFIQIN 468 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + ++F + +GE + + G V + L S +++ + Sbjct: 469 DLETSDFVSEMLGETTQVYKTPIQRPGQGIFAPRV-WAPHYTPRPLRSPLELREMSARLS 527 Query: 546 YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP 605 + + +++ + + +L + E + A P Sbjct: 528 ILMVKNSRSFELTKIRHYLDKPYRAYYERAKGSSPALPKLRTW----QDEALRGAINPAP 583 Query: 606 DVPEV 610 D P+ Sbjct: 584 DTPQE 588 >UniRef50_B7KLU0 Transfer complex protein TrsK-like protein n=3 Tax=Cyanobacteria RepID=B7KLU0_CYAP7 Length = 638 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 97/589 (16%), Positives = 193/589 (32%), Gaps = 62/589 (10%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 A++ V ++ ++ K + GG + + ++ + + +G Sbjct: 29 ALLGSVAAFGLLSLIDNGGNKKAKLATSYWGGGGEKRKAAQRARKQLENPKRNSAALYLG 88 Query: 176 ---------------------------DLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLAN 207 P + + G G+GK+ VI L Sbjct: 89 MPDEVLQKLQYQWTIDKRFVFCKRKPSPKPFYVPDVQRGVSVLGGAGSGKTFSVIDPLIR 148 Query: 208 YARQRGDMVVIYDRS------GEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFD 261 A +G +IYD + ++ P + ++ D Sbjct: 149 SALDQGFPTIIYDFKYPAQTSRAVAYALKRGYKIRVFAPGFEESDSCNILSFLKDAEDAV 208 Query: 262 ---NTANTL-----IPMGTKEDPFWQGSGRTIFAEAAYL---MRNDPNRSYSKLVDTLLS 310 A+T+ + G K D F++ +G T+ L + + Y+ L+ + Sbjct: 209 AAGQLAHTITKNCDLGNGGKGDKFFEDAGATLVEGVFLLTKAIAQMRGKQYADLMTSSAI 268 Query: 311 IKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM 370 + + KL L ++ N + I +V + + + + F RD++ Sbjct: 269 LSLPKLGLRLLHAQQQNKFPIWTMRPLDQIMSVSGSSETESSIVGTAQRTFQKFIKRDYI 328 Query: 371 -------RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFF 423 + + + + + P+++ L + + ++ E R + F Sbjct: 329 GAFCGKSTLPLDLDGKTLIIFGLDRNNRDIVGPLLAATLHMVVSRNVSRIEPRKDPLCVF 388 Query: 424 CDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR 483 DELPT+ LP L EAR+ G C V Q+ QLE IYG++ A +F + F Sbjct: 389 LDELPTIF-LPQLQNWFNEAREDGFCGVIAAQNLGQLERIYGKELARIIFGGTACKFLFN 447 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSY--GADPVRDGVSTGKDMERQTLVSYSDIQSLP 541 + A++ + +G+ E S+ S G ST + +++ L + L Sbjct: 448 PQDPESAKYFSEFLGDVEVKYDSKSRSKNTGKHGDGGSRSTSDNRQKRPLFEPAQFLKLS 507 Query: 542 DLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 V P P + R EME ++ R A S Sbjct: 508 TGKAVVINP-----AYSRGDEDYVPIKQKIRVARCEIQEMEWSVARWPKIRAALKNDRKS 562 Query: 602 LFEPDVPEVVSGEDVTQAEQ--PQQPVSPAINDKKSDSGVNVPAGGIEQ 648 + D+ E + + P+ P + + ++ K + N E+ Sbjct: 563 NIDDDIRRKQFEERLALVNELFPEPPNNDSNSNGKGGNQSNQKQTTKEE 611 >UniRef50_B9D155 VirD4 n=1 Tax=Campylobacter rectus RM3267 RepID=B9D155_WOLRE Length = 646 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 96/657 (14%), Positives = 203/657 (30%), Gaps = 90/657 (13%) Query: 47 IKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSE 106 +K+ + W + + ++ V ++ + + A + K +I Sbjct: 1 MKMDSSKEFTAKRWAWAFFVSLIMGVVLYLAVVKVIFNPDLINVPA---VAYKILINIGA 57 Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD 166 A+ L+ + F + + G P+D +M Sbjct: 58 PTLKLKAYVALFTLIAPFLVVFTWWLL------PYFRDGEDYGSARFATPEDFPKMNINY 111 Query: 167 GKDSDIRIGDL-----PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDR 221 + ++ +R ++ + + G+GK+ + + + V D Sbjct: 112 KNGLVLGCHNIDSDNPQFLRATQPLSTLVVAPPGSGKTAGM--IIPNLLSVLNSCVTLDI 169 Query: 222 SGEFVKS------YYDPSIDKILNPLD-ARCAAWDLWK--------ECLTQPDFDNTANT 266 GE K Y + ++ +P ++ + + + A+T Sbjct: 170 KGELYKKTAGYRQKYFNNEIQLFSPFSWDNTLFFNPFDRSIVKDMEYIHIKKLAEQIAST 229 Query: 267 LIPMGTK-EDPFWQGSGRTIFAEAA-YLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSP 324 + E+ W S RT+F A Y M+ D + + ++L + E L Sbjct: 230 IFVGEKGNENDHWIVSARTMFVFFAEYFMQRDRHATLAQLAQAPKADYFEYLDEKFGEEA 289 Query: 325 A-----------------------------------------ANLVEEKIEKTAISIRAV 343 A + SI++ Sbjct: 290 MKEIDEDDPDKERERDYDVDTFKIWLKQTSFDESIDESTRNQARAYARAADNEFASIKST 349 Query: 344 LTNYVKAIRYLQGI-EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWL 402 ++K Q + FT D K +++ + L P+I +++ Sbjct: 350 YDTFMKVFSNPQVASATSKMSFTFEDL------RAKRISMYVVVQTEDIDILAPLIRIFI 403 Query: 403 SIAIRGLLAMGE--NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 + L++ E + R ++FF DE K+P L+E R +G VF QSY Q+ Sbjct: 404 ETLFKKLMSGQECSDPERFIYFFGDEFVRFGKMPFLLEAPALCRSYGLLPVFVTQSYEQI 463 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 + YGE + + F S K AE + IG+ ++K S+ + Sbjct: 464 KKYYGEDDMNIVKNNSGYHVIFNMNSDKDAEDTSKLIGDYTNIKISKSQ---GNMELFKS 520 Query: 521 STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYP-AVKLSLKYQTRPKVAPEFIPRDINP 579 + K E + LV+ D+++ + + G Y +K + Y + ++ Sbjct: 521 NISKSKEAKKLVTAQDLKNQDSSDILILVKGFYKMPIKAKVPYWFKMAQWKGADKLEVEA 580 Query: 580 EMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSD 636 + E + + E E + E+ Q + ++ + Sbjct: 581 KAEPNEATAPQDVHVAKKGSGKEAEG---EAKTAENNANLNQSGINPADEKKQQRDE 634 >UniRef50_B5Z5X5 TrsK protein n=3 Tax=Bacillus cereus group RepID=B5Z5X5_BACCE Length = 560 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 79/499 (15%), Positives = 174/499 (34%), Gaps = 43/499 (8%) Query: 231 DPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKED--PFWQGSGRTIFAE 288 ++ ++ A++ + A T+ K+D ++ + + + A Sbjct: 12 QGYKVYQIDFINFESNAYNPLDYVKDDQEALQLAKTISKNSKKDDKEDYFFNTAKDLLAG 71 Query: 289 AAYLMR-NDPNRSYSKLVDTL---LSIKIEKLRTYL----RNSPAANLVEEKI---EKTA 337 + +PN + K V +S LR + PA NL+++ KT Sbjct: 72 LIIYCKSENPNANIPKDVKREFYRVSDDENYLRELCDAIGEDHPAYNLLKDASIAEGKTR 131 Query: 338 ISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 SI + + F R++ ++ L+I D P Sbjct: 132 TSILSSFAQQTGIFSLQKVARMTTHSDFNFREF------QKEKSILYIKIRMDE-NPFTP 184 Query: 397 VISMWLSIAIRGLLAMGENRNRRV----WFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 + + + I + + + ++ F DE + K+ +L R G + Sbjct: 185 LTATFFDQLITVFYDIADRNDSKLPIPSIFLLDEFANIGKIEKYGRVLSTCRGLGMSMIT 244 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSY- 511 IQ AQLE++YG++ A ++ + + F R+ + A++ + GE SE S Sbjct: 245 IIQDNAQLENLYGKEVARTIINNHDFTLFLRTKDPETAKYYSNLAGETTVRMTSESLSSP 304 Query: 512 ---GADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 + S + ++ L++ ++ ++ CYV + G YP + + Sbjct: 305 SGMFSGKSSSSKSVQEQYVKRPLITEGELINIDKQDCYVFISGYYPLKLKKA---WQFVI 361 Query: 569 APEFIPRDINPEMENRLSAVLAAREAEGRQM-ASLFEPDVPEVVSGEDVTQAEQPQQPVS 627 +F+ E R ++ + + ++ + E DV + E + Q +PQ Sbjct: 362 YKDFLKN--YDEYRERYRSLFNHNDKKVEELTDNELEKDVKVNLQKEKIVQEPEPQ---M 416 Query: 628 PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHP 687 + + + A + ++ E + + + + E + N Sbjct: 417 DKKEEVELNIHEENEADNLNDDINTPQSIEKLAR--DYLDGKFTLNEYLPREKIESINMT 474 Query: 688 DIQQQMQRREEVNINVHRE 706 +++ RE V+ +V E Sbjct: 475 LFEEE---REYVDYSVELE 490 >UniRef50_D1CWC3 Conjugal transfer protein traG n=1 Tax=Brucella sp. 83/13 RepID=D1CWC3_9RHIZ Length = 617 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 84/605 (13%), Positives = 177/605 (29%), Gaps = 59/605 (9%) Query: 22 FSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIK------- 74 F + L+ I+ +++ + G + G+ Sbjct: 21 FLLMETSPLFWPPIYQNARAAILVMFLGLALLTLAGDTQGRIRSASGLAVGAALLAASAL 80 Query: 75 --SQPVYEIQYYGKTFRMN----AAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLIT-- 126 + P +F+ + + + M+ + A L +L I L Sbjct: 81 ALTDPTIAAGVLLDSFKAWRNAGYSGIESIRGMVSTWNRFTEAQKLGLQTSLAIGLPVPL 140 Query: 127 FFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEI- 185 FF++ I + G + + R L+ + + + ++R Sbjct: 141 FFILRAISIAAPASSNRTSKQGPWRARWMNRSELRQLRHNDTGLPLGLSGCAMLRYRPNP 200 Query: 186 ------QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYD-----PSI 234 + AGK + + V + D GE Sbjct: 201 KTGWRAGHHVAIAGTRAGKGVSV--VIPAIIDHDGPVAVLDVKGENFAVTRRYRQSLGRQ 258 Query: 235 DKILNPL---DARCAAWDLWKECLTQP---DFDNTANTLIPMGTKEDPFWQGSGRTIFAE 288 +LNP + +++ D + A L+ + +++ A Sbjct: 259 VVVLNPFGVIEPSKDSFNPLDYIRQAHLVRDIEVIAEGLVRPEGGNGAHFAEMAKSMIAA 318 Query: 289 AAYLM---RNDPNRSYSKLVDTLLSIKIEK-LRTYLRNSP--------AANLVEEKIEKT 336 ++ R + +R+ ++D L S E L + AA E Sbjct: 319 VIEVVMTSRAEADRNLITVMDVLFSAGFETTLTEWAGAPETFGTRPAAAAATFLAAGENE 378 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 +I+ + R + F + LF+ D + Sbjct: 379 RGAIKTTIKKAFDWARSDEL-----RSFLSTSTCSLENLFEGRADLFMVVPLDQVDAQAV 433 Query: 397 VISMWLSIAIRGLLAM--GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGI 454 + + +I + + + + + V DE L ++ L+ I A G +F Sbjct: 434 FLRLLTNIILGMAVRLEGAKKPKKNVLLVLDEFVRLGRMEKLINIANVAAGCGIEALFIT 493 Query: 455 QSYAQLEDIYGEKAAASLFDVMNTRAFFRSP--SHKIAEFAAGEIGEKEHLKASEQYSYG 512 Q Q+E +YG+ AS+ T F + A +AA +G++ L ++Q S Sbjct: 494 QDKGQIESVYGKGDTASILGSCVTTRIFGLGRAEFETANWAANALGDQTVLTRTKQSS-- 551 Query: 513 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 + T +RQ L++ I + + PA+ ++ P + Sbjct: 552 -AKFGESRKTSTTEQRQKLMTADQILEMKTGKMLLLTGSKPPALVDAIVSHQHPAYRGKL 610 Query: 573 IPRDI 577 + Sbjct: 611 DRNPM 615 >UniRef50_Q44346 Conjugal transfer protein traG n=28 Tax=Bacteria RepID=TRAG_AGRT5 Length = 658 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 75/604 (12%), Positives = 169/604 (27%), Gaps = 76/604 (12%) Query: 25 IANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYY 84 + L + +G++ NG L + Sbjct: 42 MLGRAGLALPYIAAVAIGIIGLFAA------NGSANIKAAGLSVL-AGSGVVITIATLRE 94 Query: 85 GKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICL-ITFFVVSWILGRQGKQQSE 143 A+ V ++ ++ ++ + A ++ + L + + K+ Sbjct: 95 VIRLNSIASSVPAEQSVLAYADPVTMIGASIAFISGMFALRVAIKGNAAFATTAPKRIGG 154 Query: 144 NEVTGGRQLTDNPKDVARMLKKDG--------KDSDIRIGDLPIIRDSEIQ--------- 186 G ++ A++ + G + + +P D Sbjct: 155 KRAVHGEADWMKIQEAAKLFPERGGIIIGERYRVDRDSVAAMPFRADDRQSWGAGGKSPL 214 Query: 187 ----------NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF----VKSYYDP 232 + + G K+ + A + G +V+ D S E + Sbjct: 215 LCFDGSFGSSHGIVFAGSGGFKTTSVT--IPTALKWGGGLVVLDPSSEVAPMVCEHRRQA 272 Query: 233 SIDKI-LNPLDARCAAWDLWKECLT-----QPDFDNTANTLIPMGTKE----DPFWQGSG 282 I L+P A ++ + D A ++ + D F++ S Sbjct: 273 GRKVIVLDPT-AGGVGFNALDWIGRHGNTKEEDIVAVATWIMTDNPRTASARDDFFRASA 331 Query: 283 RTIFAEAAYLMR-----NDPNRSYSKLVDTLLSIKIE---KLRTYLRNSPA------ANL 328 + + +++ ++ L + + +L S + ++ Sbjct: 332 MQLLTALIADVCLSGHTETEDQTLRRVRANLSEPEPKLRARLTKIYEGSESDFVKENVSV 391 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSN 387 +T + A + Y +G+ F+ D G + +FI+ + Sbjct: 392 FVNMTPETFSGVYANAVKETHWLSYPNYAGLVSGDSFSTDDLADGGTD------IFIALD 445 Query: 388 ADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + + + + + + N R F DE+ L L L RK+G Sbjct: 446 LKVLEAHPGLARVVIGSLLNAIYNRNGNVKGRTLFLLDEVARLGYLRILETARDAGRKYG 505 Query: 448 GCYVFGIQSYAQLEDIY-GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKAS 506 QS Q+ + Y G A + F+ + +F A++ + G+ Sbjct: 506 IMLTMIFQSLGQMREAYGGRDATSKWFESASWISFAAINDPDTADYISKRCGDTTVEVDQ 565 Query: 507 EQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 S G S K + R+ L+ ++ + V G P + R Sbjct: 566 TNRSTGMKG--SSRSRSKQLSRRPLILPHEVLHMRSDEQIVFTSGNPPLRCGRAIWFRRD 623 Query: 567 KVAP 570 + Sbjct: 624 DMKA 627 >UniRef50_D0UIW1 ATPase n=2 Tax=Aggregatibacter actinomycetemcomitans RepID=D0UIW1_AGGAD Length = 579 Score = 232 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 82/581 (14%), Positives = 176/581 (30%), Gaps = 103/581 (17%) Query: 41 VGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKY 100 + L L++ + F++G + + + + P + + Sbjct: 7 IALFLFVTLIPTYFLSGLLLLLANKIRLIEAFKRYYPTLTLDAIWGNYP----------- 55 Query: 101 MIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA 160 ++W + +++ VV L+I L F + G +V Sbjct: 56 ------KIWQSLLISFVVCLLIMLKLF-------------YQPKKNLYGNAEFATASEV- 95 Query: 161 RMLKKDGKDSDIRIGDL--PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI 218 R + +++ I +G L ++R Q L GK I + + VV+ Sbjct: 96 REMGLMEEENGIIVGKLGEKLLRFIGAQFVSLAAPTRGGKGIGI--VIPNLLEWQQSVVV 153 Query: 219 YDRSGE---FVKSYYDP---SIDKILNPLDARCAAWDLW------KECLTQPDFDNTANT 266 D E Y P + ++ + D N A Sbjct: 154 KDIKDECYRITSKYRQKVLGQKVYRFAPFERNTHRFNPLDCIDMRDRARAELDLTNQAMG 213 Query: 267 LIPMGTKED-PFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPA 325 L + D FWQ + +F A+L+ + +S + + TL + +L + Sbjct: 214 LYRLTGNPDQDFWQSQAQNLFVATAFLLWDMRQKSLTDM--TLTYANLLRLHAGFDETQE 271 Query: 326 AN-------------------------------LVEEKIEKTAISIRAVLTNYVKAIRY- 353 L+ K +T +I + N + + Sbjct: 272 DGSIEHIDFAQHARLCIQSGIAHSTTADKLNVYLISCKSGRTKSNIDSTFINPLMIFQNE 331 Query: 354 LQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA----IRGL 409 + + F +R ++ ++ +A+ V ++++S+ I L Sbjct: 332 IVEYATSASDFDLR------ALRREKITIYFHISANDLILAPQVANLFMSMVIANNIDEL 385 Query: 410 LAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDI----YG 465 ++ DE + L + + + +G + QS QL D YG Sbjct: 386 PETNPALKYQLLLLMDEFTAVGMLSIINKSVGFIAGYGLRLLIIYQSQGQLRDDKPHGYG 445 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKD 525 + A ++ D + + + + + AE + +G + K S + S Sbjct: 446 KGGAKNILDNIACKILYAPDNQEDAEEYSKVLGNRTVDKLSHNRGKTS-------SHSIT 498 Query: 526 MERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRP 566 + L+ + + + + V L P + Y P Sbjct: 499 DHGRPLLLPQEFRLIGEFKEVVMLNNSKPILCNKAVYYNDP 539 >UniRef50_A3W6B6 Type IV secretion system coupling protein n=1 Tax=Roseovarius sp. 217 RepID=A3W6B6_9RHOB Length = 643 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 81/543 (14%), Positives = 173/543 (31%), Gaps = 60/543 (11%) Query: 150 RQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYA 209 R+ + S + + G GK + Sbjct: 109 RRNRMSASLSQNGFLFGKLGSPASRAPFVSATPDRFPHAMMIAPTGRGKGVGF--VLPNL 166 Query: 210 RQRGDMVVIYDRSGEFVKS---YYDP---SIDKILNPLD------------ARCAAWDLW 251 VI D GE + + + +P D R ++ Sbjct: 167 LHFQGSAVILDVKGENFEKTSIHRQKALNNQVWYFSPYDYVQPEGKNGPVLTRTHRFNPL 226 Query: 252 KECLTQPDFDN-------TANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKL 304 + P + A+ + + + + +GR++F + + + Sbjct: 227 QRIADLPSPEQQYTAVNTMADLFLIVESVNAQSFFQAGRSLFVASCLYAIETGKPTIGEA 286 Query: 305 VDTLLSIKIEKLRTYLRNSPAAN---LVEEKIEKTAISIRAVLTNYVKAIR---YLQGIE 358 + + +K + + + +V E A + +L +YV IR ++ Sbjct: 287 LRIMTGGGNKK--EFYKRAAMQTANPVVAEIFLSMADEVDKILDSYVSVIRGAGLELWLD 344 Query: 359 HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM--GENR 416 + T ++ L+I + +L P+I + + AI L G + Sbjct: 345 PAVDRATQASDFDFGTFRREPQSLYIVVQPEHLKTLAPLIRLLFADAIACLQRAHPGPDE 404 Query: 417 NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVM 476 V F DE L K P +++ + R +GG QS LE IYGE +L Sbjct: 405 PHPVMFLMDEFDQLGKQPLVLQSIKTIRSYGGRLFIISQSIPGLEGIYGETDRRALQAGA 464 Query: 477 NTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSD 536 + + + A+ + +G++ + + + + + + + E + LVS ++ Sbjct: 465 GVQIYMTPQDDRTADVLSAALGKRTIVGKTRSQAT-VRKLSESANISRRSEERALVSPAE 523 Query: 537 IQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEG 596 + P V G YP ++Y F D + AA + Sbjct: 524 LLRFPLDKVLVLPEGQYPIKADHIRYYAD----RHFEEIDKARQGHALPYPPAAAPVSNR 579 Query: 597 RQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIE---QELKMK 653 + +L +P+ P P + ++ DK+ ++ + G ++ + + K Sbjct: 580 PKKITLEKPE---------------PAAPAAISMGDKEFETAIQTYTGALQGYAEAARAK 624 Query: 654 PEE 656 P++ Sbjct: 625 PKK 627 >UniRef50_B6JNL0 VirD4 coupling protein n=10 Tax=Helicobacter RepID=B6JNL0_HELP2 Length = 747 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 102/742 (13%), Positives = 223/742 (30%), Gaps = 119/742 (16%) Query: 69 MRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFF 128 + I P++ I TF + + L+ + + V + Sbjct: 11 VLFSILLIPLFFILANYYTFDALKSLRQAYFFSQSVFVGLYHGASIFDLKFEVYLTMLIS 70 Query: 129 VVSWILGRQGKQQSENEVTGGRQLTDNPKDV--ARMLKKDGK-----------DSDIRIG 175 ++ ++ E + G N KD+ ++ K+G D+ +G Sbjct: 71 LMPFVATIYINFPKTTETSHGYARWANVKDIECFKIFSKEGFCKVVHRLGVQFDNGFILG 130 Query: 176 DLPIIR-----DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF---VK 227 + + + GAGK+ + + +I D GE Sbjct: 131 KFGFPKLRNVCYDKPLGAMIVAPPGAGKTACVA--LPNLLTLPNSCIITDIKGELRDKTA 188 Query: 228 SYYDP---SIDKILNPL-DARCAAWDLWKECLTQPDFDNTANTLIPMGTKED-------P 276 Y + I NP D ++ + + A L + D Sbjct: 189 GYRQKFLNNRILIFNPYGDDNTCYFNPFD--KRIVEKMTFAEQLRHVKAVGDGIFVDEED 246 Query: 277 FWQGSGRTIFAEAAYL----------------------------------MRNDPNRSYS 302 W + +F A L + ++ Sbjct: 247 HWVSKAKELFVFFALLQVVTKGHSSFYDVSIAPANDYAPLIHPKSPYYKQLYQHDKKTGE 306 Query: 303 KLVDTLLSIKIEK-----LRTYLRNSPAANLVEEKIEK------------TAISIRAVLT 345 ++D + ++ L+ +L ++ EK T ++ ++ Sbjct: 307 VILDPQTNAPMKNPQANVLKLFLNQVADQKYIDMNDEKNYDPREPEPPYGTKGALDEIIR 366 Query: 346 NYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQ-----------------KNGWLFISSNA 388 ++ E + + +M ++ + N ++I Sbjct: 367 TDARSWANTPDDEFGSIMSSFKRFMYVYKDPKVREATSKMSFDYEELRTGNISIYIVIAQ 426 Query: 389 DTHASLKPVISMWLSIAIRGLL-AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 +L ++ +L + L+ R++ DE KLP L+E+ R + Sbjct: 427 IDIGTLSSLVRAFLESIAKNLMVKESSKPEERIFIIADEFVRFGKLPFLLEMPALCRSYN 486 Query: 448 GCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE 507 +F Q YA + Y + L V++ F+ S + AE + E+GE + S+ Sbjct: 487 VVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFT--RQSK 544 Query: 508 QYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY-PAVKLSLKYQ--T 564 YS + G S+ E + L++ DI ++ V + G +KL Y Sbjct: 545 NYSTEKSQLVFGGSSSYSHEGRNLLTAQDIMNINSDEVIVIVTGAKATPLKLKANYWFKD 604 Query: 565 RPKVAPEFIPRDINPEMEN---------RLSAVLAAREAEGRQMASLFEPDVPEVVSGED 615 + + +P D+ E + + +A+ + + + Sbjct: 605 KELLKRANLPIDLEVERQRVEEPIQPTTEIETTPNQNKADLGPSNKGEKVENESNERNTN 664 Query: 616 VTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDM 675 PQ+ + + + + D + + ++ E+++ L +SE Sbjct: 665 ENNPTTPQELENSNLKESEKDDESTITLENANENIEQGNHNEIDEILKKPLSEISMEEKR 724 Query: 676 AAYEAWQQENHPDIQQQMQRRE 697 A ++ QQ + Q+ Q + Sbjct: 725 ALFKKMQQGDEESEQEVTQSTQ 746 >UniRef50_A2RL04 Conjugal transfer protein TraD n=14 Tax=Lactobacillales RepID=A2RL04_LACLM Length = 612 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 80/599 (13%), Positives = 183/599 (30%), Gaps = 75/599 (12%) Query: 48 KISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQ 107 K ++G ++ + ++ +Y K + + +L Y Sbjct: 13 KFKPYLILSGFLFILGFAIGNFFWMLPGDSIYS-----KEIFLTSGDLL--GYFNKELWH 65 Query: 108 LWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDG 167 + AA+V V+ + ++ G ++ E G +++ + + Sbjct: 66 FFYHPSFAALVCGVVFFLVGMLMFVYNNDSGIYRTNVEH--GSARLAKEEELEKYRDPEP 123 Query: 168 KDSDIRIGDLPIIRDSE--------IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIY 219 +++ I ++ + ++ ++ + G GA K+ + + Q VI Sbjct: 124 ENNKILSKNVQMGLFNDRLPQKVQKNKSDMVLGDSGAAKT--LALIMTNIMQLNASFVIT 181 Query: 220 DRSGEFVKS-----YYDPSIDKILNPLDA-RCAAWDLWKECLTQPDFDNTANTLIPMGTK 273 D G V KIL+ ++++ T+ D D + Sbjct: 182 DPDGGLVYRVGAMLKKAKYNIKILDLNTLTNSDTFNIFNYIKTELDIDRVLEAITEGTKS 241 Query: 274 ED----PFWQGSGRTIFAEAAYLMRNDPNRS--------YSKLVDTLLSIKIEK---LRT 318 D FW + + + D + S ++ L +K + Sbjct: 242 SDNQGEDFWVKAEALLVRAIIAYLWFDGKDNNYTPHLGMISDMLRYLERDDPKKPSPVEE 301 Query: 319 YLRNSPAAN----------LVEE-KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIR 367 + L + +T S+ + + + Q + Sbjct: 302 LFDEQNKLHPDNYAYRQWSLFNDLYKSETRASVLGIAASRYSVFDHDQLRDMIR-----H 356 Query: 368 DWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNR--------- 418 D M +++ +FI+ +T S + +++L+ + L A + Sbjct: 357 DSMDIESWNEEKTAVFIAI-PETSKSFNFIANIFLATIMETLRAKSDRIRLGREQLAPGK 415 Query: 419 ---RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 V F DE + K+ + E L RK ++ +QS AQL+ +Y + + D Sbjct: 416 KLLHVRFLIDEFANIGKIANFEEALATFRKREMSFMVILQSLAQLKKMY-KNNWEEIVDN 474 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 + + K EF + +G++ S G +D + L+ Sbjct: 475 CASLIYLGGDDPKTLEFLSKRLGKQTISLRKHSISKGGSGGGSES---RDKTGRDLMMGD 531 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREA 594 +I ++ C V + + P+ + R+ + + E Sbjct: 532 EIATIDGDECLVFIKKERGFLDRKYYAYEHPRADE--LARNPGDKNWFNYRRYMNEEEK 588 >UniRef50_B2JXV0 TRAG family protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JXV0_BURP8 Length = 601 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 71/537 (13%), Positives = 156/537 (29%), Gaps = 60/537 (11%) Query: 170 SDIRIGDL--PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE--- 224 +G ++ L +GK + + D VV+ D E Sbjct: 6 PPFIVGKFKGEYLKYRGQDFLMLAAGTRSGKGVSM--VIPNLLTYPDSVVVEDIKEENFM 63 Query: 225 FVKSYYDP--SIDKILNPL--DARCAAWDLWKECLTQP------DFDNTANTLIPMGTKE 274 + Y + +P + R A++ + +P D L P Sbjct: 64 YTSGYRRKCGHEVYLWSPFSENGRSHAYNPLEYIAGRPAYTRVGDVMTIGEHLYPSNVDA 123 Query: 275 D-PFWQGSGRTIFAEAAYLMRNDP----------------NRSYSKLVDTLLSIKIEKLR 317 +W + R +F + P R+ + V +++S + Sbjct: 124 RLRYWNDNARNLFIGIVLYLLETPSLPCTFGEVLRQASGKGRAIREHVSSIVSTRANATD 183 Query: 318 TY----LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQ-GIEHNGEPFTIRDWMRG 372 T A N + + +I + +T + + F + + Sbjct: 184 TLPALSFECLDALNRFLSQSREAFANIVSTMTAPLNVFSNPVVDAATSRSDFHLGE---- 239 Query: 373 VREDQKNGWLFISSNADTHASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELP 428 +K +++ + +++++ S I R A + DE Sbjct: 240 --VRKKRISIYVGIKPGDLKAGALLVNLFFSQLIDLNTREQPAENPELKYQCALMMDEFA 297 Query: 429 TLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE--DIYGEKAAASLFDVMNTRAFFRSPS 486 K+ + F + +QLE +YG A +L R+ F + Sbjct: 298 APGKIDIIDTANAFIAGFNLRLMLIFHGMSQLEDPKLYGRHGAETLAINCKMRSLFAPRT 357 Query: 487 HKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCY 546 K +E + +G HL S S G T + + L+ ++++L Sbjct: 358 LKDSEEYSKMLGTFTHLSRSRSRSRGRSASTS---TNETEHGRPLMLPQELRALSSRKQI 414 Query: 547 VTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPD 606 +T+ G P + + ++ + + +P + ++++ P+ Sbjct: 415 ITIDGCEPILCDKAYFYEDAELVDRLVQQ--SPYLLGVMASLEKTNRRRAWFGFGPKFPN 472 Query: 607 VPEVVSGEDVTQAEQPQQPVSPAIN----DKKSDSGVNVPAGGIEQELKMKPEEEME 659 ++ V + P + PA G + ++ E E Sbjct: 473 EEQMKHAAFVARELSAPVPQIDVEQWWHSQNAARRAQVEPAAGAAETAGVRDVREHE 529 >UniRef50_A7HZT7 Cmgd4 n=14 Tax=Campylobacterales RepID=A7HZT7_CAMHC Length = 658 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 84/644 (13%), Positives = 183/644 (28%), Gaps = 85/644 (13%) Query: 79 YEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQG 138 I ++ + + + A ++L + F++ +I ++ Sbjct: 27 VVIFVLNDALKLLPKVWKPEFTFLALINGYPKVYE-ALTISLFLSFSVVFLLPFIPKKE- 84 Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG--DLPIIRDSEIQNFCLHGTVGA 196 K + + ++ I IG + ++R Q L + Sbjct: 85 KLYGNARFANSADIRKMGLFPKKGKDGKIDNNGIIIGMYNNQLLRFGGQQFVALGAPTRS 144 Query: 197 GKSEVIRRLANYARQRGDMVVIYDRS---GEFVKSYYD---PSIDKILNPLDARCAAWDL 250 GK I + + V+ D E+ Y + NP + ++ Sbjct: 145 GKGVGI--VIPNLLDYPNSCVVQDIKLECFEYTSKYRKEILKQDIFLFNPYSFKTHRYNP 202 Query: 251 WKECL-----TQPDFDNTANTLIPMGTKED--PFWQGSGRTIFAEAAYLMRND------- 296 + ++ AN L P+ ++ G + +F Y+M + Sbjct: 203 LFYIDMKGENADAELNDFANILYPLKNDGSVTDYFNGKAKDLFIGLCYMMNDLLGTRKGI 262 Query: 297 ---------------------------------PNRSYSKLVDTLLSIKIEKLRTYLRNS 323 ++ S DT ++ K+ + Sbjct: 263 AFLQKYELECSFSLYGILKLSEGLNFEVEIADGEIKTISNFADTYNTLVEMKMVSPKAKE 322 Query: 324 PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQG-IEHNGEPFTIRDWMRGVREDQKNGWL 382 E K + S + + R + + F RD +K + Sbjct: 323 RIDAFFEIKSDNERSSAMGSFISPLAIFRADNMRLATSANDFDFRDL------RRKKMTI 376 Query: 383 FISSNADTHASLKPVISMWLSIAI-----RGLLAMGENRNRRVWFFCDELPTLHKLPDLV 437 +I D AS KP+++++ I +GL + DE L Sbjct: 377 YIGITPDKLASAKPILNIFWQQLILINVQQGLPQSNKELKHPCLLLMDEFTASGYLATYS 436 Query: 438 EILPEARKFGGCYVFGIQSYAQLE----DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFA 493 + + + Q+ +QL + YG+ A +L R ++ A+ Sbjct: 437 SAISFMAGYDLRSLIIYQADSQLTNNKPEGYGQAEANTLLKNHACRIYYAMKD-DDAKRL 495 Query: 494 AGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY 553 + +G K + S + G + + L+ +I+ +P T + + G Sbjct: 496 SESLGTKTVKQRSRN-------LGQGGGGSESETSRALMLSKEIEEMPFDTEIIKIEGKP 548 Query: 554 PAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSG 613 P Y + +F + + + + A + P E Sbjct: 549 PIKCKKALYYSNKYFMDKFKEVSPSLKNIKEIPNRKSLENAIQNGETYIKIPLQNEETLQ 608 Query: 614 EDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEE 657 + + + + P D + ++ ++ IE E E E Sbjct: 609 NYLKENIEKRLNELPIEEDAEIENALD--NINIEDEEYNSDEYE 650 >UniRef50_B1F9B8 TRAG family protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1F9B8_9BURK Length = 765 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 83/693 (11%), Positives = 200/693 (28%), Gaps = 71/693 (10%) Query: 18 RIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQP 77 R+ + + + + + + + L+ I S + + + Sbjct: 24 RLLHLDAMTDPVEFTAVVGLMLALCLLWGICASAVLLKSATTLDRVIAGGLFALVALTGL 83 Query: 78 VYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSA------------FVLAAVVALVICLI 125 Q+ G T ++ +W W AA + L + + Sbjct: 84 AVAGQFAGATLFAKLEKLPDSAVGLWTLRDYWHFYGDVKGVKRSLQIATAASILLPLVPV 143 Query: 126 TFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK----DSDIRIGDLP--I 179 + + ++ + + ++ + + D I +G Sbjct: 144 AAVIAALVMKPKRDLHGDARFAYSYEIRRYGLLDEANGRPRQRGDYRDPTIIVGRYKGKY 203 Query: 180 IRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSIDK 236 + + + + K I + D V + D GE Y K Sbjct: 204 LTFRGTEFVMVAAKTRSQKGVAI--VIPNLLTFSDSVAVLDVKGENFDLTSRYRQACGQK 261 Query: 237 IL--NPLDAR--CAAWDLWKECLTQPDF------DNTANTLIPMGTKEDPFWQGSGRTIF 286 + P D + W+ + P F A L + F+ +F Sbjct: 262 VFRWAPFDQQGYTHRWNPLFKIAKSPPFVRVGRLQAIAARLYHTADARNKFFYEQAADLF 321 Query: 287 AEAAYLMRN-DPNRSYSKLVDTLLSIKI---EKLRTYLRNSP------------AANLVE 330 A + + ++ +++ + E L +++ P A + V Sbjct: 322 MGLALYLMEMTGDCTFGQVLRLATTPDKKVREHLTELMQHEPQKGVPLSGDCLGALSRVL 381 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 ++T ++I A ++ + + D+ R ++ ++I Sbjct: 382 ASPDETMLNIVATFNAGLRLFSNPIVDQAT----SACDF-ELDRVRRELTSIYIVMPVRE 436 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRRVWF----FCDELPTLHKLPDLVEILPEARKF 446 A + +++ + I L + + + F DE L ++ L + + Sbjct: 437 IAVASLLGNLFYTQLIEDNLDVLPGADPTIKFQCLAIGDEFTALGRIEVLDKGNAFIAGY 496 Query: 447 GGCYVFGIQSYAQLE--DIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLK 504 + +QS AQLE ++YG A +L + + A+ + +G Sbjct: 497 WIRLLTILQSQAQLEPNELYGPAGARTLITNHAVLVAYAPGNQHDAKELSETLGTFTEKA 556 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 S+ ++G + T + + L+ +++ + V L P + Y Sbjct: 557 TSKSRNHGRN---TSTGTSTSDQGRALMLDQELKRMEQHEEIV-LGFQRPILCEKATYYK 612 Query: 565 R-------PKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVT 617 V+P D E+ + A A E + +S + Sbjct: 613 DDLFIDRMRSVSPMLAAIDERLPTEDEIKAAWQAGELRATGIPLNNPETYHAALSAKAAG 672 Query: 618 QAEQPQQPVSPAINDKKSDSGVNVPAGGIEQEL 650 + +Q + + + + G + ++ Sbjct: 673 EIRLARQAGAKPLTAAELLALDQQKPGPLATDM 705 >UniRef50_B8I7H6 TRAG family protein n=23 Tax=Bacteria RepID=B8I7H6_CLOCE Length = 606 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 95/610 (15%), Positives = 194/610 (31%), Gaps = 79/610 (12%) Query: 104 CSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN-------- 155 Q+++ + AV+ VI ++ + L + + G + Sbjct: 1 MPSQVYTLIAVTAVMFFVIGGLSLLAHYYTLNGIKSKTVGDGQHGTARFATRNEIKKTYT 60 Query: 156 --PKDVARMLKKDGKDS--DIRIG------DLPIIRDSEIQNFCLHGTVGAGKS-EVIRR 204 P +V + + + I +G + + D + + G G GK+ + Sbjct: 61 HIPYEVGKWRRNENLPQVQGIVVGCKTSGKTVTALLDEGDVHCLMIGAAGVGKTANFLYP 120 Query: 205 LANYARQRGDMVVIYDRSGEFVKSYYDPSIDK------ILNPLDA-RCAAWDLWKECLTQ 257 YA G + D G+ ++Y + D +++ + R ++ Sbjct: 121 NLEYACASGMSFLTTDTKGDLFRNYGSIAKDYYGYKVSVIDLRNPTRSDGNNMLHLVNKY 180 Query: 258 PDF-----DNT-------------ANTLIPMGT------KEDPFWQGSGRTIFAEAAYLM 293 D DN A T++ G ++ F+ + + ++ Sbjct: 181 MDAYLKDPDNLSLKARAERYAKITAKTIVNSGGMDAGAYGQNAFFYEAAEGLLTFVILII 240 Query: 294 RND---PNRSYSKLVDTL----------LSIKIEKLRTYLRNSPAANLVEEKIEKTAISI 340 R + + + + L L A TA Sbjct: 241 AEYCPPEKRHIISVFKLIQDLLAPSGVKGKNQFQLLIEKLPPEHKARWFAGAALNTAEQA 300 Query: 341 R-AVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVIS 399 +VL+ + + E + + +F+ + IS Sbjct: 301 MQSVLSTALSRLNAFLDSELE-QILCFDTAVDAEEFCNTKHAVFLVMPEEDSTKY-FFIS 358 Query: 400 MWLSIAIRGLLAMGE----NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 + + R +L++ + RV FF DE+ T+ K+ + +R V IQ Sbjct: 359 LIVQQLYREILSVADEAGGRLKNRVMFFLDEIGTIPKIDSAEMMFSASRSRRISIVAIIQ 418 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFR-SPSHKIAEFAAGEIGEKEHLKASEQYSYGAD 514 S+AQLE YG++ AA + D F +P+ AE + +G K + S Sbjct: 419 SFAQLEKNYGKEGAAIIIDNCQLVLFGGFAPNSHSAEILSQALGNKTVMSGSISR----- 473 Query: 515 PVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL-SLKYQTRPKVAPEF- 572 R+ S M ++ L++ ++++LP + G YP + L ++ + Sbjct: 474 -GRNDPSQSLQMIQRPLMTTDELKTLPKGNFILAKTGCYPMKTILKLFFKWGIVFNKVYE 532 Query: 573 IPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIND 632 I + ++ L +G + D PE +D Q+ + P D Sbjct: 533 ITEKSSRKVAYADRMELEQEILKGHAACNYINEDEPEDTVLQDGFSHINKQRYIEPEQAD 592 Query: 633 KKSDSGVNVP 642 + + P Sbjct: 593 TQQEQKSKPP 602 >UniRef50_C7WD59 TraG/TraD family protein n=1 Tax=Enterococcus faecalis JH1 RepID=C7WD59_ENTFA Length = 598 Score = 228 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 60/477 (12%), Positives = 134/477 (28%), Gaps = 57/477 (11%) Query: 198 KSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY-----DPSIDKILNPLD-ARCAAWDLW 251 K+ + Q VI D G + + K+ N ++ + Sbjct: 132 KTRF--YVLPNLLQMHSSYVINDSKGGILSDTAAIMQQNGYRIKVFNLNTMKNSDGYNPF 189 Query: 252 KECLT-----QPDFDNTANTLI-----PMGTKEDPFWQGSGRTIFAEAAYLMRNDP---N 298 + D N L+ P D FW + R+ A +L+ Sbjct: 190 HYIRRTEGDCEIDILKVVNNLMKNTSDPNKKGGDSFWDDAQRSFLAAIFHLLILKGKPEE 249 Query: 299 RSYSKLVDTLLSIKIEK--------LRTYLRNSPAANL----------VEEKIEKTAISI 340 ++ + D + ++++ + + + KTA SI Sbjct: 250 QNLGIVADLVRRARVKEDDEEYISSIDLVFQELEQEQPSCFAAKQYQNFKMAAGKTAKSI 309 Query: 341 RAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISM 400 L + T D + + L+I DTH ++ + SM Sbjct: 310 LISLGVRLSPFDVPDI-----RKLTSTDTLELDTIGDRKTVLYIIL-PDTHTTMNFLASM 363 Query: 401 WLSIAIRGLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQ 455 L+ +N V DE ++PD ++ R G +Q Sbjct: 364 IYQQLFDTLVYKADNVYNGSLPIPVRCLLDEFANTGQIPDFENVIATTRSRGISVDVILQ 423 Query: 456 SYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADP 515 + Q+ + + ++ ++ + ++ + ++G++ + S G Sbjct: 424 NLTQISKKLYKDSWETIIGNCDSFLYLGGNEQSTHKYISTQLGKETIDVVTYNESRGTTG 483 Query: 516 VRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPR 575 + + + L+ ++++ + C L G P + K + P Sbjct: 484 ---SFTKNSQKQGRNLLDPNEVREIKGGKCIYMLRGTKPFLSDRFKLERHPLFKKLKETP 540 Query: 576 D----INPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 +P + + E + + E + D E + Sbjct: 541 SGYMYQSPLDQEEFITNNDPIDFELSKNVDMKEFLKHTEIETYDFEDEEIETINLDE 597 >UniRef50_B8HZ08 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HZ08_CYAP4 Length = 562 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 88/574 (15%), Positives = 174/574 (30%), Gaps = 62/574 (10%) Query: 113 VLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDI 172 A + LV L ++V G+ + S T + + + + Sbjct: 27 KYAKPLVLVAVLGIVWLVLAYRGKPKLKDSAAWATRDHVRRCRYLVAKQNIIGGKDNVGL 86 Query: 173 RIGDLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRGDMVVIYDRS----GEFV- 226 +G + + + G GKS + + ++ D E + Sbjct: 87 ELGS-NLPLYDAVTSLISIGAPKTGKSFSAVLSALYAHLKLNYPAILVDVQYPVQTEQMV 145 Query: 227 ----KSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTL-----IPMGTKEDPF 277 + Y I P W++ + N A L D F Sbjct: 146 CLARQLGYAAEDIHIFAPGCPESGIWNICEYAQ-GSHAANLAKMLNDNFATSGSQGGDRF 204 Query: 278 WQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLL---------SIKIEKLRTYLRNSPAANL 328 + +G + + L R P + +L + +++ ++ + L Sbjct: 205 FDPAGEALISAVLQLARTIPGLNDVVGAQAILGLSELPKRVRLNEDRIDPWVYRAFMQLL 264 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNA 388 EK EKTA SI + +N K + ++ G + L + + Sbjct: 265 STEKSEKTAASIAGIASNLFKRFTEQDIAPALVGQTSFPLFLDGAK------LLILGVRS 318 Query: 389 DTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGG 448 D + P+ LS+ + + R + + DEL L + E RK+G Sbjct: 319 DLREVIMPIQMALLSLLVD--INSVPTRKKPLQICFDELAA-ATYRSLPSRINENRKYGV 375 Query: 449 CYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ 508 + Q+ +QLE+ YG+ ++ T+ F + AE + +G +++ ++ Sbjct: 376 YFNLAFQNLSQLEEKYGKNLTTAILGACGTQILFNPREQQTAELISKIVGTQKYRESQRS 435 Query: 509 YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 S V ST ++ + L+ ++ + + G Sbjct: 436 RSVSGGKV--SNSTSSQVKERPLIPPHQVRMMGQGWAIILNAG----------------- 476 Query: 569 APEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 F RD + E + E + L + V PQ+PV P Sbjct: 477 ---FRARDGSSEYIPYRCKIRVFEEYKQ-----LTRWSASQWTHARKVFIQRSPQRPVDP 528 Query: 629 AINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQL 662 A V + +L+ + +E Sbjct: 529 AYLKAGVKLAEAVLSLPSTADLERQIADEALSGY 562 >UniRef50_A8S5W9 Putative uncharacterized protein n=4 Tax=Clostridium RepID=A8S5W9_9CLOT Length = 695 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 89/684 (13%), Positives = 195/684 (28%), Gaps = 134/684 (19%) Query: 46 WIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCS 105 IK + G + L + P + +G+ + Sbjct: 29 MIKKIAGYILGGIVVVMVLGYLTAMMLTELVPAILTRDWGR--------------LWNPG 74 Query: 106 EQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTG-------GRQLTDNPKD 158 L A + V V+ + + V ++ K+ + + R +TD KD Sbjct: 75 LLLKPAVWIYGAVVTVMVYMLYLVFHVGTVKRAKRLMKAKEDSIESSLENSRFMTDKEKD 134 Query: 159 VARMLKKDGKDSDIRIGDLPIIRD------------SEIQNFCLHGTVGAGKSEVIRRLA 206 K+ + + + +P+ ++ + + G G+GK+ Sbjct: 135 DNFSPKRFTRLKEEKKDGIPVYAVYNKKKKELNINIAKPMHGLVIGATGSGKTTSFINPM 194 Query: 207 NYAR---QRGDMVVIYDRSGEFVKSY----------------YDPSIDKILNPL------ 241 G ++ D GE + + DP NPL Sbjct: 195 IQILGKSSAGSSMICTDPKGELFQLHSGMLAEQGYKVMVLDLRDPYSSFRWNPLGDIYDR 254 Query: 242 ----------------DARCAAWDLWKEC------------------------------- 254 D R + +L E Sbjct: 255 YQLYLKAGQGIFQCDTDVRQSGLELVNEADQYKDVWYEYKGKAYAVRRELLTVIKVEKQK 314 Query: 255 ---LTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTL--- 308 D ++ + + P+ +++DP W+ R+I M D ++ Sbjct: 315 IYDEIYEDLNDLISVICPIESQDDPVWEKGARSIIMAVCLAMLEDSEYPELEMTREKFCF 374 Query: 309 ---------LSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 + L+ Y P + + + L +Y+ + + Sbjct: 375 YNVNKAISNSEDEFRALKEYFMGRPKLSKSVGLSRQVLSAADTTLASYMSIAFDKLSMFN 434 Query: 360 NGEPFTIRD--WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR- 416 + ++ + + + LF+ D + + ++++ + L+ + R Sbjct: 435 DEGLCSLTSETDIDPQQFAAEPTALFLKI-PDEKDTRHALAAVFVLCIYKALIKVASARE 493 Query: 417 ----NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASL 472 R V+F DE + K+ +++ R + +QSYAQL+++YG+ + + Sbjct: 494 DLSLPRNVYFILDEFGNMPKIDKFDKMITVGRSRKIWFNMVVQSYAQLDNVYGQTISNII 553 Query: 473 FDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 + F S + E + G K S + G ++ ++ + L+ Sbjct: 554 KSNCGLKMFIGSNDIETCEEFSKLCGNKTVSTQSVSSTLGDKT--GNINVSSQVQTRPLI 611 Query: 533 SYSDIQSLPD----LTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAV 588 S++Q L + + G YP P + + V Sbjct: 612 YPSELQKLNNKNSTGNAIIVTFGNYPLKTQFTPSYKCPLYEMKTMDLSQVRMNAFFGDEV 671 Query: 589 LAAREAEGRQMASLFEPDVPEVVS 612 + +AS E ++ Sbjct: 672 YYDLDERNYIIASRQEKEMEVSAE 695 >UniRef50_A3IXB1 Transfer complex protein TrsK-like n=2 Tax=Cyanothece RepID=A3IXB1_9CHRO Length = 580 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 101/579 (17%), Positives = 195/579 (33%), Gaps = 58/579 (10%) Query: 87 TFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEV 146 + + ++ H+ M Q +L A+V + + I + +G+ + Sbjct: 9 SIQTALSESFHNGSMANYFLQPEGMMLLGALVMMAVLAIAKGGGGGVKSSRGQLATGR-- 66 Query: 147 TGGRQLTDNPKDVARMLKKDGKDSDIR----------IGDLPIIRDSEIQNFCLHGTVGA 196 GG++ +N K VA K+ K + + G PI ++ + G + Sbjct: 67 FGGQKELNNAKKVALAQMKEKKRAPVTAWIGEPNNNPFGTDPIYLPDLNRSALILGAASS 126 Query: 197 GKS-EVIRRLANYARQRGDMVVIYDRS----GEFVKSYYDP--SIDKILNPLDARCAAWD 249 GK+ I + RG + +YD + +Y IL P A + Sbjct: 127 GKTFTFINPIGMSCIDRGYPIFMYDFKYPDQTSILATYARAKGYQVDILAPGYAESGVLN 186 Query: 250 LWKECLTQP----DFDNTANTLIPMGTK------EDPFWQGSGRTIFAEAAYLMRNDPNR 299 E + + L K ED F+ SG + L R Sbjct: 187 PITEFIQDATSGLAASQLSEVLNANFKKQGSSQSEDGFFGPSGNQLTKATLLLARTMKYP 246 Query: 300 SYSKLVDTLLSIKI--------EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAI 351 L + +++ ++ ++ EKT SI++ Sbjct: 247 DLITCAKILSISNLARRILKKKKEMNPWILDAFGQFTSSASSEKTEASIQSTAQLMFNRF 306 Query: 352 RYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 + + TI L + + L P+ + +++ + +A Sbjct: 307 IVPELLSVLCGKTTI------PTTLTGKRMLVLGLDQSKRDVLAPLFAALINMIVDKNMA 360 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 M +R DE+PT++ +P L + E R G C + G+Q+ QLE++YG+ A + Sbjct: 361 M--DRKDPFVLLADEVPTIY-IPMLKKWPNEHRSKGFCGILGVQNMTQLEEMYGKVGARN 417 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 + TRA+ + AE+ A + EKE + + S + S ++++ + L Sbjct: 418 IIGACATRAYMNPQDIETAEWIAKALPEKEVVLKHKNKSVSSGKT--TRSFSEEVKTKPL 475 Query: 532 VSYSDIQSLPDLTCYVTLP-------GPYPAV---KLSLKYQTRPKVAPEFIPRDINPEM 581 +S + I + V P G +P K S +Y+ K + P + Sbjct: 476 MSAAKIGQMQTGEAIVINPHFATKKEGFFPVHHRFKPSKRYKDLNKWCEKVWESSFRPGL 535 Query: 582 ENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE 620 R + + P+ + E+ E Sbjct: 536 IERSQNRPQITADDLTLRQETVDELFPDSLLKENDNTDE 574 >UniRef50_C6X7V8 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7V8_METSD Length = 748 Score = 227 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 119/688 (17%), Positives = 222/688 (32%), Gaps = 56/688 (8%) Query: 19 IRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPV 78 I +F+ + + L + + T + G + T + P Sbjct: 31 IALFTLTYGAIGFTLGSIGAW-AFDFKFYPLPPATDMIGRGFVEHFTYWSKSIVNGVFP- 88 Query: 79 YEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQG 138 + + + + + A + H Y ++ + A I L + Sbjct: 89 FLFKSSVEQYSLYMATIKHYGYQYLLIPRI--------MFATFIGLFGATLGFMSKHSNP 140 Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKK-------DGKDSDIRIGDLPIIRDSEIQNFCLH 191 + G +L + V ++ K GK ++I +L + + + Sbjct: 141 VKAQVETHMRGMKLLEFGDAVEELVSKFASEILKHGKFTEIA-ENLSLSMKRVFAHHIIF 199 Query: 192 GTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYY-DPSIDKILNPLDARCAAWDL 250 G G GKS+ + + +G +I D EF ++Y + I++P DAR DL Sbjct: 200 GASGTGKSQYMGSAIFDSINKGLKTLILDPKYEFTSAFYKNNGKMAIIDPTDARSHVVDL 259 Query: 251 WKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN-------DPNRSYSK 303 + A LIP DP W + R +F ++ PN S+ Sbjct: 260 ADLVASIGLIKKFAAALIP-AKGNDPMWSNAARAVFTGLILYLKAMFKDDNGKPNFSWKD 318 Query: 304 LVDTLLSIKIEKLRTYLRNSPAANLVEEKIEK---------TAISIRAVLTNYVKAIRYL 354 L D ++S + + P A + +I K TA SI L +++ IR L Sbjct: 319 LADVMVSTPEQVIYIMQNYYPEALKLVGEINKETNQLTENATATSIMINLLSFMGGIRDL 378 Query: 355 QGIE---HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGL-- 409 I + K +FI N +I L+ +I L Sbjct: 379 ARFWYDDPENPQPKISLLRFMTDPNYKIKTIFIKPNDIEGEMSSCIIRAVLTYSISLLDS 438 Query: 410 LAMGENRNRRVWFFCDELPTLHKL------PDLVEILPEARKFGGCYVFGIQSYAQLEDI 463 + +++ FF DE KL P + + + R + Q+ QL I Sbjct: 439 PKIPDSKTPNGIFFLDEFHAPGKLVNELDQPVIDKGIDRGRSKQWAFYLATQNIIQLYKI 498 Query: 464 YGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTG 523 Y ++ S + + +P + A +GE+ K S + V S+ Sbjct: 499 YTKEDVDSWRETTSNFILTGAPLGETASKVCEYLGEQFIDKLHTSLSGSGNGV--SASSN 556 Query: 524 KDMERQTLVSYSDI---QSLPDLT--CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 + ++ S++ + D L G L + P+VAP +I R Sbjct: 557 YQEHSKKVLLPSELTEKLQITDTHIRYLAILRGLPNVYLLEKPFVDIPQVAPIWIERKQL 616 Query: 579 PEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSG 638 + + V + ++ G+D + +QP+ + Sbjct: 617 FATGSLDNRVSESITT--AIGVAMKIEQETIKTKGKDEPTIDLNKQPIIEDEGNLGDWVD 674 Query: 639 VNVPAGGIEQELKMKPEEEMEQQLPPGI 666 A + +E + EE +E + I Sbjct: 675 TGQHADAMSEEERKFIEESVESETIKDI 702 >UniRef50_B7Q9R6 Coupling protein TraD, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q9R6_IXOSC Length = 308 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 98/311 (31%), Positives = 153/311 (49%), Gaps = 5/311 (1%) Query: 271 GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVE 330 G+ D FWQ S +F + R+ + L L + + L + L+ + AA Sbjct: 2 GSGNDQFWQNSSEILFISCVESLIKKDCRTITSLKKILTKVNRQDLASLLQGTRAARYFS 61 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 ++ TA SI +V+T V+ I LQ + + F+++ + + E N WLF++S+ Sbjct: 62 KQNTTTAESILSVMTTGVRPICLLQD---SKQQFSLKQYFYNI-EKGSNSWLFLASSPSQ 117 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 P+++ L +A+ L+ G N RR+WF DEL +L +L L +L E+RK+GGC Sbjct: 118 REVTLPLLACILELAVSYLIESGINEQRRMWFVIDELASLGRLNSLSSLLAESRKYGGCV 177 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 + QS QL D YG A ++LFD T+ FRS A G E+ + S Sbjct: 178 MAATQSLNQLFDKYGHYAGSTLFDQFATKFMFRSTDPSTARLITDIFGNVEYASQQKNTS 237 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPG-PYPAVKLSLKYQTRPKVA 569 YGA RDGVS + +R++L++ +DI SL DL C+V LP KL L Sbjct: 238 YGAHEHRDGVSYTEQEKRKSLITTNDIASLKDLECFVGLPDPQIRITKLQLSPAQVEHKN 297 Query: 570 PEFIPRDINPE 580 ++P ++ E Sbjct: 298 KGYVPLSLSEE 308 >UniRef50_B3Q3U5 Conjugal transfer protein G n=5 Tax=Rhizobium etli RepID=B3Q3U5_RHIE6 Length = 639 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 79/595 (13%), Positives = 175/595 (29%), Gaps = 82/595 (13%) Query: 33 LFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNA 92 + F L GL+ + G+ + + +T + Sbjct: 54 PALLFGPLAGLLTVWTLPL-HRRRPVAMTSLLCYLGVSAFYAMREFARLGPSVQTGVIT- 111 Query: 93 AQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWI---------LGRQGKQQSE 143 ++ S + AV+ V + V + I R+G Sbjct: 112 ------------WDRALSYLDMVAVLGAVAGFLAVAVSARISVVVPDEINRARRGTFGDA 159 Query: 144 NEVTGGRQ----------------LTDNPKDVARMLKKDGKDSDIRIGDLPIIR---DSE 184 + ++ D + + + + G P++ D + Sbjct: 160 DWLSMAAAAKLFPPDGEIVVGERYRVDKEIVHELPFDANDRGTWGQGGKAPLLTYKQDFD 219 Query: 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV------KSYYDPSIDKIL 238 + G K+ + A + ++ D S E +++ +L Sbjct: 220 STHMLFFAGSGGYKTTS--NVVPTALRYTGPLICLDPSTEVAPMVVEHRTHALGREVMVL 277 Query: 239 NPLDARCAAWDLWKECLT----QPDFDNTANTLIPMG----TKEDPFWQGSGRTIFAEAA 290 +P + +++ T + D A+ L+ + ++Q + Sbjct: 278 DPTNP-IMGFNVLDGIETSRQKEEDIVGIAHMLLSESVRFESSTGSYFQSQAHNLLTGLL 336 Query: 291 YLMRNDPN---RSYSKLVDTLLSIKIEKLRTYLRNS----------PAANLVEEKIEKTA 337 + P R + + ++S + LR+ + E+T Sbjct: 337 AHVMLSPEYAGRRNLRSLREIVSEPEPSVLAMLRDIQENSQSDFIRETLGVFTNMTEQTF 396 Query: 338 ISIRAVLTNYVKAIRYLQGIEHN-GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 + + + + + G+ F + G ++ +F++ A S Sbjct: 397 SGVYSTASKDTQWLSLDSYAALVCGKAFKPSHIVSGRKD------VFLNIPASILRSYPG 450 Query: 397 VISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 + + + I ++ RR F DE+ L + L E RK+G + QS Sbjct: 451 IGRVIIGSLINAMMQADGAFRRRALFMLDEVDLLGYMRVLEEARDRGRKYGVSMMLMYQS 510 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPV 516 QLE +G+ A S + ++ + A + + GE + G + Sbjct: 511 VGQLERHFGKDGATSWIEGCAFASYAAVKALDTARTVSAQCGEMTVEVKGSSRNLGWNSR 570 Query: 517 RDGV--STGKDMERQTLVSYSDI-QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 G S +R+ L+ +I QS+ + + G P Y R ++ Sbjct: 571 NGGTRKSESVSFQRRPLIMPHEITQSMRKDEQIIIVQGHSPIRCGRAIYFRRKEM 625 >UniRef50_Q2Y574 TRAG protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y574_NITMU Length = 661 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 64/451 (14%), Positives = 124/451 (27%), Gaps = 72/451 (15%) Query: 141 QSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSE 200 + Q + +K + P + E N GAGK Sbjct: 14 KYNRRALASAQFIPQEYLDRQGYRKGDFWLGRTLNGRPFGWNEE-MNLLTCAGPGAGKGV 72 Query: 201 VIRRLANYARQRGDMVVIYDRSGEF---VKSYYD---PSIDKILNPL-------DARCAA 247 + + V+ D GE ++ +L+P D R Sbjct: 73 S--TVVPNLLEFPGSAVVVDPKGELASMTAAFRRDVLGQKVIVLDPARTAKVSEDLRG-T 129 Query: 248 WDLWKECLTQ-----PDFDNTANTLI-PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSY 301 ++ + E A+ ++ P ++PFW + M + Sbjct: 130 YNPFDELDADDPFVTTAAQVIASGIVVPNPKAKEPFWDDNALDFIQSCILYMVRHYPPNL 189 Query: 302 SKLVDT---LLSIKIEKLRTYLRNS---------------------------------PA 325 L+ + + Y+R Sbjct: 190 RTLMKLRETVSMGDSDLFDAYVRRKQEEDPDFMGSESDAFGLFLKEMFNTPDFGGVIRET 249 Query: 326 ANLVEEKIEKTAISIRAVLTNYV------KAIRYLQGIEHNGEPFTIRDWMRGVREDQKN 379 A + E T S+ + ++ + LQ F +R+ R + + Sbjct: 250 AAKIGRMGENTKGSVLSTAATHLDFVKSPELWDVLQSNPDPSRTFRLRELRR----NDRP 305 Query: 380 GWLFISSNADTHASLKPVISMWLSIAIRGLLA--MGENRNRRVWFFCDELPTLHKLPDLV 437 +++ D M +S I+ + + R+ V DE L +P + Sbjct: 306 LTVYLCLPVDMIPRQGRWFRMIISRIIQSIERSEFDKKRDHPVLMMIDEFFQLGPIPSIT 365 Query: 438 EILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEI 497 L +R FG +Q QL+ Y A ++ + FF A++ + I Sbjct: 366 NTLTYSRSFGLRLWLIVQDLNQLKTNYP-DAWETILGSCGIKQFFGVNDLVTAKYVSELI 424 Query: 498 GEKEHLKASEQYSYGADPVRDGVSTGKDMER 528 GE+E S + + S+ + Sbjct: 425 GEEEIDIPSISLTKTSSGTESRNSSQTHSQG 455 >UniRef50_C7WLP9 TraG/TraD family protein n=7 Tax=Bacteria RepID=C7WLP9_ENTFA Length = 551 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 59/489 (12%), Positives = 146/489 (29%), Gaps = 59/489 (12%) Query: 185 IQNFCLHGTVGAGKSE--VIRRLANYARQRGDMVVIYDRSGEFVK-----SYYDPSIDKI 237 +N + G G+ K++ V+ + N R +V+ D GE + + Sbjct: 32 NRNIFVVGGPGSFKTQSYVLPNVVNN---RSTSIVVTDPKGEIYELTNEIKKAQGFKTVV 88 Query: 238 LNPLDAR-CAAWDLWKECLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIFAEAAYLMR 294 +N D + ++ D + AN ++ K FW + + + Sbjct: 89 INFKDFLLSSRYNPLLYIRKSNDTNKIANVIVSAKNDPKRKDFWFNAQLNLLNTLIKYVY 148 Query: 295 NDPN---RSYSKLVDTLLSIKIE-------KLRTYLRNSPAANL--------VEEKIEKT 336 + R+ ++D L +L P + + + Sbjct: 149 FEYEPSARTIEGILDFLEEFDPRYNEEGVSELDEQFERLPDGHEAKRSYYLGFRQAQSEA 208 Query: 337 AISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKP 396 +I L ++ ++ FT + L++ + + Sbjct: 209 RPNIVISLLTTLQDF-----VDKEVSEFTSTNDFFFEELGTSKICLYVLISPLDR-TWDG 262 Query: 397 VISMWLSIAIRGLLAMGENR----NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVF 452 +++++ L +G+ + DE L P L R + Sbjct: 263 LVNLFFQQMFTELYFLGDKHNAKLPVPLVMLLDEFVNLGYFPTYENFLATCRGYRISVST 322 Query: 453 GIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG 512 +QS Q ++YG+K ++ + AE+ + ++ + + S Sbjct: 323 ILQSLPQGFELYGDKKFKAIIGNHAIKICLGGVEETTAEYFSRQVNDTTIKVYTGGTSES 382 Query: 513 ADP-----VRDGVSTGKDMERQTLVSYSDIQSLPDLT----CYVTLPGPYPAVKLSLKY- 562 S +++ L++ ++ +L V + G ++ + ++ Sbjct: 383 KTSAKTTNRSGSKSESYGYQKRRLITEGEVINLQQEENGRKSIVLIDGKPYMLRKTPQFE 442 Query: 563 ------QTRPKVAPEFI--PRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGE 614 + ++I + E L R+ + E + ++ + Sbjct: 443 LFGNLLKKHEISQQDYISSQTEFAKEYIEELEKQHKQRKVQLASAPIFHEKKQEDDLNKK 502 Query: 615 DVTQAEQPQ 623 ++ EQP Sbjct: 503 EINLPEQPI 511 >UniRef50_B1V6Z4 TraG/TraD family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6Z4_CLOPE Length = 731 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 88/621 (14%), Positives = 204/621 (32%), Gaps = 66/621 (10%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSEN-EVTGGRQLTD 154 + + + W ++ ++ ++I + F + + Q ++ + Sbjct: 75 FLEAIFYFEFNKYWYVYIFTYIMLILIIIKIQFRLKTSFRTINEGQKGKCRFCSLLEIEE 134 Query: 155 NPKDVARMLKKDGKDSDIRIGDLP--IIRDSEIQNFCLHGTVGAGKSEVI--RRLANYAR 210 K V + K+ + I + D N + GT +GK E+ + Y+R Sbjct: 135 QYKSVPKKEKEFEGKGGVVISSYEDKVFIDEGDVNNLVIGTTRSGKGELFLFPTIDVYSR 194 Query: 211 QR-GDMVVIYDRSGEFVKSYY-----DPSIDKILNPLDA-RCAAWDLW----------KE 253 + ++I D GEF+ S ++LN ++ +++ Sbjct: 195 AKVKSSLIINDPKGEFLASSKDTLEKRGYRIEVLNLIEPSNSMSYNPLHLIVEAYLEKDY 254 Query: 254 CLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR-----------SYS 302 Q + ++ +DPFWQ S ++ + + + Sbjct: 255 GEAQKLCKSLTYSMYYKPNVKDPFWQNSAMSLVNALILATLEECYKKYGEEEMRNRVTMF 314 Query: 303 KLVDTLLS-------IKIEKLRTYLRNSPAANLVEEKIEK-------TAISIRAVLTNYV 348 + + L +L Y RN P+ ++ + + I +V + Sbjct: 315 TVANMLSELGSAYDEDGNNELDKYFRNLPSNSIAKMQYATSNFAKGSARSGIFSVAMTEL 374 Query: 349 KAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI- 406 + + + + ++D+ +ED + LF+ D S + SM++ Sbjct: 375 EKFTMEKIAKMTSRNSINLKDFGFINKEDDRPIALFMIL-PDYDNSDYFIASMFIRQLYW 433 Query: 407 ----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 L G R V F DE + + L IL + +Q+++Q+E+ Sbjct: 434 VLSKEATLTKGGKCEREVVFLIDEAGNMPPIEQLEVILTVCLGRNIKFTLVVQAFSQIEE 493 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 YG+ A ++ + + + + AE + +G+K + S + Sbjct: 494 KYGKDKAKTIIGNCANKVYIMTTEYDTAEEFSKLLGDKTII----NISRSGEITDTTKHY 549 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEME 582 + ++ + L + +D+ L VT L + Q R ++ P I M+ Sbjct: 550 TESVDSERLKNPNDLMLLKMGETVVT-------RNLKREDQKRNRIVPNPIFNSGKTSMQ 602 Query: 583 NRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVP 642 R + + +A + P + + V D+ E + + + + Sbjct: 603 YRYEYLSKWFD-NNSSIADVEIPSLHKDVDLNDLILFENIEPVIIEEQSIEDIKQEEKER 661 Query: 643 AGGIEQELKMKPEEEMEQQLP 663 + + +E+ + + Sbjct: 662 KVHLNEIFSPMEIKEIIELVE 682 >UniRef50_C7CN76 TraG conjugal transfer protein n=2 Tax=Methylobacterium extorquens group RepID=C7CN76_METED Length = 674 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 92/647 (14%), Positives = 186/647 (28%), Gaps = 93/647 (14%) Query: 17 MRIRMFSQIANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQ 76 + +++ + + + F GL ++ +RD Sbjct: 38 HSMMLYALRIAAVAFPALVLFA-AAGLTRQGDSGRVVAAGVSLFLIGLIAWTVRDEYLRL 96 Query: 77 PVYEIQYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGR 136 G++ A L+ A + A VA + L++ V Sbjct: 97 VTLAPGADGRSLLRRADI------------GLFCAVMFAGFVAFITPLVSLVRVRRTTRG 144 Query: 137 QGKQQSENEVTGGRQLTDN-------------------------PKDVARMLKKDGKDSD 171 K G PK+ +R+ K + + Sbjct: 145 YSKPIRSKSAAHGDAEWATMKLAGELFPPQGDLILGELYRPDLDPKNTSRVFKPNDPKTW 204 Query: 172 IRIGDLPIIR---DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS 228 G P++ D + + G K+ + V+ D S E Sbjct: 205 ASGGRKPLMGFNCDFGSTHGLVFSGSGGFKTTG--AVIPMLLSWPGNAVVLDPSTELHPM 262 Query: 229 YYD-----PSIDK-----ILNPLDARCAAWDLWK-----ECLTQPDFDNTANTLIPMGTK 273 D + P + + +++ E + D + K Sbjct: 263 LAQYRSSIRGKDVERPIHCITPTNPKS-GFNVLDWIGQGENSAEKDISAVVGWIATGPVK 321 Query: 274 EDP---FWQGSGRTIFAEAAYLM----RNDPNRSYSKLVDTLLSIK---IEKLRTYLRNS 323 D F++ S + + R+ L + + + IE+L LR+ Sbjct: 322 RDDPKDFFRNSALQLIRGVLAHICLNRSYTGPRTLRALREIISEPETDFIERLILILRSE 381 Query: 324 P-------AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH-NGEPFTIRDWMRGVRE 375 A + ++T + A + + + + +G F+ + Sbjct: 382 NDGSFAKLALGPFKSMAQQTFSGVYATAADLTNWLSFKEYAAIVSGGDFS------SLDL 435 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPD 435 + +F+S + T + + + + L + RV F DE L + Sbjct: 436 IDDDLDVFVSLDLQTLQDYPGLARVIIGGLMNALYHANGEIDGRVAFILDEAARLGNMSL 495 Query: 436 LVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAA-ASLFDVMNTRAFFRSPSHKIAEFAA 494 + RK+G V QS QL +G+K A ++ F+ + ++F A++ + Sbjct: 496 IEVARDAGRKYGITMVLVYQSLGQLRQQWGDKDAVSAWFESTSWQSFSAITDVDTAKWLS 555 Query: 495 GEIGEKEHLKASEQ---YSYGADPVRDGVSTGKDMERQTLVSYSDIQS-LPDLTCYVTLP 550 G S S G VS ++++ L+ +I + + + + Sbjct: 556 ERCGYFTQEIVSYSQQARSGGKGSNGVSVSASTSLQKRALIMPDEIINTMRRDEQILLVG 615 Query: 551 GPYPAVKLSLKYQTRPKVAP-----EFIPRDINPEMENRLSAVLAAR 592 G P Y RP++ P F RD+ AA Sbjct: 616 GVEPIRCGRPIYYRRPEMRPLVGANRFQTRDVQEATAGSDRPDNAAD 662 >UniRef50_A5ESM8 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESM8_BRASB Length = 573 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 91/564 (16%), Positives = 188/564 (33%), Gaps = 46/564 (8%) Query: 32 CLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMN 91 + +F + ++ L+ T +W EG P+ + +T N Sbjct: 23 GVMVFSFFIITLLAPFDNPNIT---PAYFWRTVWDEGFHRHCGPGPLQVFDFDCRT--AN 77 Query: 92 AAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWIL--GRQGKQQSENEVTGG 149 L + L ++ + + G Sbjct: 78 LRGWLAWP-------PFYLRLCLFFGCTIIAATLAAIWSWKHTSPRETVRTIRGLWPKFG 130 Query: 150 RQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYA 209 + + + + DS + + +E N + G G+GKS VIR A Sbjct: 131 AEGRASLRKAVAVTGIPQPDSLWLAPYVQLTPVAEASNILVIGDQGSGKSAVIRGWAEQI 190 Query: 210 RQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIP 269 RG+ +I+D G+ + ++ P DAR WD+ ++ + A L+P Sbjct: 191 LARGERSIIHDAKGDILA-CAPIDEILLVAPHDARGWTWDIGRDVINAQGAREVAEKLVP 249 Query: 270 MGTKEDPFWQGSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLSIKIEKLRTYLR--NSPA 325 G++ + W + I + A ++ + + ++ L + ++LR L +SP+ Sbjct: 250 SGSELESMWSNGAKAILSGAIEALQRERKTDWGWADLFKFVFKSP-KELRAALEAAHSPS 308 Query: 326 ANLVE----EKIEKTAISIRAVL-TNYVKAIRYLQGIEHNGE--PFTIRDWMRGVREDQK 378 +L+E +T +S+ L + IR L E + + F++RDW+ + Sbjct: 309 VHLIEIDADGVANRTTLSLMLTLWVAALTTIRPLAQAEASNKECSFSVRDWLSEQ--SRL 366 Query: 379 NGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG-ENRNRR-VWFFCDELPTLHKLPDL 436 + + NA+ + + + + LL+ R+ + DELP L +L Sbjct: 367 PRTIILQHNAEYPLLSTAISGLLVDVVCGKLLSPSTPKRDCPWLHLILDELPVLGRLEQF 426 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAA-G 495 ++L R+ G + Q + Q+ +Y AA+L + R + + E Sbjct: 427 PKLLNVGREKGVAAIVATQDWEQILKLYQRYDAATLEARFKIKVVCRLGTSETRERVVGK 486 Query: 496 EIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY----SDIQ-SLPDLTCYV--T 548 G + RD + ++ ++ + D V Sbjct: 487 YAGRRTIETW-------VATSRDKPEKIRHENEIDVIEPNYLDDELGVRIVDGFLVVRAL 539 Query: 549 LPGPYPAVKLSLKYQTRPKVAPEF 572 + G + + K + Sbjct: 540 VFGLGNPAVVETPFTQWRKRREAY 563 >UniRef50_A4JFK6 Type IV secretory pathway VirD4 components-like protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFK6_BURVG Length = 818 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 92/474 (19%), Positives = 170/474 (35%), Gaps = 57/474 (12%) Query: 114 LAAVVALVICLITFFVVSWILGRQGKQQSEN-EVTGGRQLTDN-----------PKDVAR 161 + L + + R+G S+ + G +L ++ R Sbjct: 44 WGLGLRLAVSASLALASGGYVLRRGLIPSDALMHSRGLRLLKGRDAIRRAKKTCAGEIKR 103 Query: 162 MLKKDGKDSDIRIGD-LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD 220 K + D+ + + ++ + G VGAGK+ + +L R D V+++D Sbjct: 104 ASKLANRGRDLMFSPEICFAPERWARHIMVVGAVGAGKTVFLTQLLAQILARKDRVLLFD 163 Query: 221 RSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG 280 +F + I+ D+R AWD+ ++ T+ A LI +DPFW Sbjct: 164 IKRDFTMYFK---HAIIIAATDSRSWAWDIARDVATRQAAQQFAKQLIEDS--KDPFWSA 218 Query: 281 SGRTIFAEAAYLMRNDPNRSY--SKLVDTLLSIKIEKLRTYLRNSPAANL---------- 328 + R + ++ + + +L D L + L ++ + Sbjct: 219 AARALLVGFIVMLVAEKKEDWGFPELADVLQNTPESDLPAIMKEYSPEAMEIVAEAKGRD 278 Query: 329 VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP--------------FTIRDWMRGVR 374 + A SI+ + Y AI L + P F+ +WM + Sbjct: 279 AAANPNQAAKSIKMTMQTYCSAIYDLATAWKDEPPDPNDPEGKPKRRPRFSAVEWM--MN 336 Query: 375 EDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRR---------VWFFCD 425 D ++ + + + + IS SI + A+ E R +W FCD Sbjct: 337 PDTRHRQVILQGDKTVEPLTRAYISQIFSIVSSRIGALPEARTVPPRTDGKSNAIWLFCD 396 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 ELP L K+ + R +V G+QS QL +IYG++ A+S M T R Sbjct: 397 ELPALGKIEAFDAAITLGRSKDVRWVAGLQSIEQLHEIYGKEKASSWVANMGTIVVGRVA 456 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQS 539 A +G+KE + + S GA+ G + + +++ S++ Sbjct: 457 PGATATQVKDMVGKKEVERPNWSASGGANGQ--GWTFMTSRDEMSVIYESELSE 508 >UniRef50_B2FKA6 Putative type IV secretory protein conjugation protein TraD n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FKA6_STRMK Length = 624 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 86/496 (17%), Positives = 180/496 (36%), Gaps = 52/496 (10%) Query: 132 WILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRD--------S 183 + + + S G +L + + V + D + Sbjct: 118 RVFLKATEPVSNTWHLSGPRLLEGKEAVDEARHRSVTPKDAEADPFALSLHPDLLLSKKH 177 Query: 184 EIQNFCLHGTVGAGKSEVIRRLANYA-RQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLD 242 ++ + G+VG+GKS +++ + R+R + +YD G+F + P I++P D Sbjct: 178 WARHVLITGSVGSGKSVILKHILEQLTRKRDAKLFLYDIKGDFTSIFKRP---IIVSPFD 234 Query: 243 ARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND-PNRSY 301 AR WD+ + T A +LIP G FW + + + ++N P Sbjct: 235 ARSHVWDVAADVRTPTQAAAFAASLIPEGDGNAKFWSMAAQDLLIGCVRELQNTRPGEWE 294 Query: 302 SKLVDTLLSIKIEKLRTYLRNSP--AANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEH 359 + L+ ++ +R A LV + +T S+ + L + + I L Sbjct: 295 WPDLAALVRRPAAEMAAGMRPHYPRGAALVRDPESQTTSSVLSSLGGFTRLIDDLATAWP 354 Query: 360 --NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG---E 414 F++ +W+R +K + + S D K I+ +++A+ L+ G + Sbjct: 355 KVGKRRFSMTEWIRDDYNGRKQ--VIVQSGPD-PTLTKAYIAAMINVAVPDLIGPGLPDD 411 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 R ++F DEL + +L ++ +L R G + +Q ++Q+E +YG+K A + Sbjct: 412 EGGRGLYFVFDELTSAGRL-NIDPLLALGRSKGVVAIMAVQDHSQVELVYGDKTAQAFSS 470 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGK-DMERQTLVS 533 ++ T + + A ++G+++ R + + E + LVS Sbjct: 471 LVGTHVVCQVQMGATRDKLASQLGKRKI------------AWRGHENKAQVHEESRALVS 518 Query: 534 YSDI---QSLPDL----------TCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPE 580 ++ V + G + L+ ++ P V + + Sbjct: 519 SGELTDRLGFRKGNRYGPEKWGIEAIVQMGGD--VLLLTWPGKSHPTVREGQVAAAWTTK 576 Query: 581 MENRLSAVLAAREAEG 596 A + Sbjct: 577 PAGPEGPSPATSPSNA 592 >UniRef50_B1M954 TRAG family protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M954_METRJ Length = 663 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 69/526 (13%), Positives = 152/526 (28%), Gaps = 78/526 (14%) Query: 112 FVLAAVVALVICLITFFVVSWILGRQGKQQ----SENEVTGGRQLTDNPKDVA------- 160 + AL + ++ V + R + N G K VA Sbjct: 116 LFCGCMFALFVVIVAPLVSLVKVRRTARGYDRPLRSNSAAFGDAEWAKMKHVAELFPPDG 175 Query: 161 -----------------RMLKKDGKDSDIRIGDLPIIR---DSEIQNFCLHGTVGAGKSE 200 R+ + G P++ + + + G K+ Sbjct: 176 LMPIGERYRVDLDDRATRVFDPSDAKTWGSGGKRPLMGFNCNFGSTHGLVFAGSGGFKTT 235 Query: 201 VIRRLANYARQRGDMVVIYDRSGE---FVKSYYDP------SIDKILNPLDARCAAWDLW 251 + + V+ D S E V + + ++P + +++ Sbjct: 236 GF--VVPILLRWPHNAVVLDPSLEVHPMVSKFREKMKPGVERKVIRIDPNEENS-GFNVL 292 Query: 252 KEC-----LTQPDFDNTANTLIPMGTKEDP---FWQGSGRTIFAEAAYLM----RNDPNR 299 + D + + D F++ S + + + + R Sbjct: 293 DWIGTGLGSPEEDIAAVTSWMTTGKVTRDDPNSFFRNSAQQLLRGLLGYICLNASYEGPR 352 Query: 300 SYSKLVDTLLSIKIE---KLRTYLRNSP-------AANLVEEKIEKTAISIRAVLTNYVK 349 + + + + + +LR + A E T I + + Sbjct: 353 TLRAMREMISDDEPRFRARLREIVDAEEEGSFARLALGPFMAMTETTFSGIYSTASEMTD 412 Query: 350 AIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRG 408 + Y + +G F+ +D + +F+ + T + + + + Sbjct: 413 WLSYARYAGLVSGGSFSSQDLATSDMD------VFVCLDIKTLDNHSGLARVIFGALLNA 466 Query: 409 LLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY-GEK 467 L RV F DE L + + RK+G V QS QL D + G+ Sbjct: 467 LYNADGRVRERVAFLMDEAARLGHMKIIETARDAGRKYGITMVMVYQSIGQLRDQWGGKD 526 Query: 468 AAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRD----GVSTG 523 A ++ + + ++F A++ + G S + + VS Sbjct: 527 ALSAWLESTSWQSFSAISDLDTAKWLSERCGSYTQNIVSFSQQARSGGGKGGGGVSVSAS 586 Query: 524 KDMERQTLVSYSDIQS-LPDLTCYVTLPGPYPAVKLSLKYQTRPKV 568 ++++ L+ +I S + + + G P Y RP++ Sbjct: 587 TALQKRPLIFPDEIMSVMRRDEQLLFVAGIAPIRCGRPIYFRRPEM 632 >UniRef50_Q48B00 Conjugal transfer protein n=11 Tax=Gammaproteobacteria RepID=Q48B00_PSE14 Length = 550 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 64/537 (11%), Positives = 144/537 (26%), Gaps = 59/537 (10%) Query: 164 KKDGKDSDIRIGDLP----IIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIY 219 K+ + +G P + Q L G+ K + D +V+ Sbjct: 16 KRIDEHPAFLLGKHPTEDSFLASYGQQFVMLAAPPGSMKGVS--AVIPNLLSYPDSMVVN 73 Query: 220 DRSGE---FVKSYYD--PSIDKILNPLDARCAAWDLWKECLTQP-----DFDNTANTLIP 269 D E + +P W+ P D A L Sbjct: 74 DPKFENWDITSGFRASAGHKVCRFSPERLETHRWNPVSAISRDPLYRLGDIRTLARVLFV 133 Query: 270 MGTKEDPFWQGSGRTIFAEAAYLMRNDP------------------NRSYSKLVDTLLSI 311 ++ W +F+ + P ++++ V L S Sbjct: 134 SDNPKNQEWYNKAGNVFSSILLYLMETPAMPCTLPQTYEIGSLGTGMGTWAQQVIELRST 193 Query: 312 KIEKLR-TYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM 370 L LR + + ++ + + D + Sbjct: 194 GPNALTVETLRELNGVFEASKNKSSGWSTTVDIVRDVLSVYAEKTVAWAVSG-----DDI 248 Query: 371 RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE-----------NRNRR 419 + ++ ++ S P+++++ + AIR + + Sbjct: 249 DFAKMREEKTTVYFSVTEGNLKKYGPLMNLFFTQAIRLNSKVIPEQGGNCADGTLRYKYQ 308 Query: 420 VWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTR 479 + DE + ++ + R G + Q Q+ IYGE+AA + ++ Sbjct: 309 LALMMDEFAIMGRMEIMETAPALTRGAGLRFFLIFQGKDQIRAIYGEEAANGIMKAIHNE 368 Query: 480 AFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVR-DGVSTGKDMERQTLVSYSDIQ 538 F K+AE + +G ++ + V G + + + L+ ++ Sbjct: 369 IVFAPGDIKLAEEYSRRLGNTTVRVHNQSLNRQKHEVGARGQTDSYSEQPRPLMLPQEVN 428 Query: 539 SLPDLTCYVTLPGPY-----PAVKLSLKYQTRPKV-APEFIPRDINPEMENRLSAVLAAR 592 LP + + G + + Y A + + P + L Sbjct: 429 ELPFDQQLIFVQGNRQTEPMKILARKIIYFEEEVFIARQKMTPPPLPVGDASKIDALTVP 488 Query: 593 EAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQE 649 + ++ + + + + +PV DK V + + Sbjct: 489 VRTLKATVAVADTKPMQAEQRQRWNPKDTASKPVQ-VEADKAQPPEVEPDPEPAQTD 544 >UniRef50_UPI0001C37D75 putative conjugal transfer protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37D75 Length = 847 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 96/709 (13%), Positives = 194/709 (27%), Gaps = 136/709 (19%) Query: 117 VVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNP------------------KD 158 + + + F+ Q + + E G + D +D Sbjct: 79 LTFFGLICVAIFIAYKFSTPQKRLHRQGEEHGSAKWGDEREMKSLAEKEKKPEFKPVLRD 138 Query: 159 VARMLKKDGKDSDIRIGDLPIIRD-----------SEIQNFCLHGTVGAGKSEVIRRLAN 207 R+ G I + II D + N + G G+GK+ + + Sbjct: 139 GKRVFDSKGHFVGFTIDNNIIIADKLKLSLNTWQHNLNLNMFIIGDSGSGKTRYVAK--P 196 Query: 208 YARQRGDMVVIYDRSGEFVKS-----YYDPSIDKILNPLDAR-CAAWDLWKECLTQ---- 257 Q VI D GE + ++ N + + ++ + Sbjct: 197 NIMQLNTSYVITDPKGEILADTGKMLLEAGYKVRVFNTIQMKHSNNYNPFHYVYDPEGNP 256 Query: 258 --PDFDNTANTLIPMG---TKEDPFWQGSGRTIFAEAAYLMRNDPNRS------------ 300 D + L +++ FW G+++ +L+ + + Sbjct: 257 STQDIVKMVDVLFSSTKVDGEKEDFWSQKGKSLLQAIIFLLFEESEYNAEKDENGKIIES 316 Query: 301 ---------------YSKLVD---------TLLSIKIEKLRTYLRNSPAANL-------- 328 KLV L E Y A L Sbjct: 317 TRDKRNLNFFAVTEKMRKLVYPPKGKRDGFFLAREDDETDEAYEERRNEAFLCPLDKDFI 376 Query: 329 -----------------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMR 371 V E+T S + VK Y + + D + Sbjct: 377 ELEKRKPDCLALRMYKEVRNAPEETGQSFLSSAN--VKTFMYNL---EEVQNLSCCDNIH 431 Query: 372 GVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAM--------GENRNRRVWFF 423 + LFI T + ++SM + L G+ V Sbjct: 432 LETIGDEKTALFIIV-PATDKTFNFMVSMLYTQMFDVLSNRANFKYVNKGKKLPVHVRCI 490 Query: 424 CDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR 483 DE + ++PD ++ R +Q+ + + Y EK + +T F Sbjct: 491 MDEFCNISQIPDFESVIAFVRSMNMSLNVIVQTLSLFKSKY-EKTWEGIIGCCSTLLFIG 549 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDL 543 ++ + +G++ S + G S + + L+ +++ S+P Sbjct: 550 GNEDTTKKYISENLGKETIDVKSSNKTKGKQ---SSTSENNSILGRELLQPNEVGSIPID 606 Query: 544 TCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLF 603 C + + P + + P + E +R +++ AE + + Sbjct: 607 ECLIIMRSHNPFQCKKYRLEKHPNYIFLADAAKTDEERMDRTFQ-ISSIHAETVKELNYV 665 Query: 604 EPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLP 663 E SG D+ + P + +KK + + E L E Sbjct: 666 ATSSNEKSSGIDLEKK--------PVVENKK--AEIPEFDSITETVLIDISGSETTYIDE 715 Query: 664 PGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGEDVE 712 + E+ E+ E E + R + ++ + ++ E Sbjct: 716 ITLFENQEIKIYGDEELTNDEIAYEEVNFEMERFDFGESIRGKEEKEYE 764 >UniRef50_B7I163 Conjugation protein, TraG/TraD family n=31 Tax=Bacillus cereus group RepID=B7I163_BACC7 Length = 1166 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 100/778 (12%), Positives = 239/778 (30%), Gaps = 122/778 (15%) Query: 33 LFIFFWILVG---LVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFR 89 + +FF +L+G + +I NG + + + I + Sbjct: 54 ILMFFSLLLGEFSFRFYSRIPALHINNGKLIILVASHFAVDIQFLWFATAPIHAKVIPYL 113 Query: 90 MNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGG 149 + ++ L+ L F ++ + + + + + + E + Sbjct: 114 ADKSKHLNFGEYEALGHVLTGNFHTLTMIFVFLPTVFMILFTLWYSGHIVRYREEILKWV 173 Query: 150 RQLTDNPKDVARMLK--KDGKDSDIRIGD-------LPIIRDSEIQNFCLHGTVGAGKSE 200 ++ + + ++ D+ IG + I N + G +G+GK+ Sbjct: 174 QKYEYKNHKLQKWFNSQEEQIYPDVEIGPHIEHKEMVRIKGKDRTLNCIIIGPIGSGKTS 233 Query: 201 -VIRRLANYARQRGDMVV--------------------------IYDRSGEFVKSYYD-- 231 +I + N + + + S + + + Sbjct: 234 SLIIPMINQDLHWMARFINKFINVFKKKDYHTEEVKGTFLNGVTVIEPSNDLCQKVFKLV 293 Query: 232 ------PSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTI 285 S ++P + ++ + + + + A + + + F++ + R Sbjct: 294 QAHKIPESAVYYIDPTNPDTKNINILRGPVDKV-AEVFAMVIQGLSESNNAFFEQAQRNH 352 Query: 286 FAEAAYLMRNDPNR---SYSKLVDT------------LLSIKIEKLRTYLRNSPAAN--- 327 + YL++ + ++ L++ LL +++EKL ++++ A+ Sbjct: 353 LKQHIYLLKLHNPQKDVTFDDLIEMYDDVERVHRMHKLLKVQVEKLYDFVQSGAASRDQK 412 Query: 328 ----LVEEKIEKTAISIRAVL------------------------TNYVKAIRYLQGIEH 359 +++ E +IR L YVK +R + Sbjct: 413 NEYKIIKGIDEWFDNTIREKLDFQGEPAVYKSGKYRGQPMHYDREEEYVKGLRNILKDLA 472 Query: 360 N-----GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGE 414 + F D+ V +Q L ++ + + L + Sbjct: 473 SNVLIRRVLFGKSDFDFDVHLEQGGILLVNTAKGELADLSNVLGKFVLLSMQNAVFRRDP 532 Query: 415 NRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 N + DE P P E ++RK+ Q+ +QL + E+ +L Sbjct: 533 NVSPYHHIIVDEFPDYVVRP-FKEFPAQSRKYKVILTIASQTLSQLALDFTEQYMFTLLG 591 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQY---SYGADPVRDGVSTGKDMERQTL 531 + F + A+ + GEKE K +E S + + + ++ + Sbjct: 592 SFRNKMIFGDVTPYDAKIFSDMFGEKEEFKEAESEQGISPMQENPVSRLGSTYQKTKEVV 651 Query: 532 VSYSDIQSLPDLTCYVTLPGPY---PAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAV 588 +S DI + C + P +++ + + + A I D Sbjct: 652 MSPGDIMAQGAFICAARIVQDNHVQPVQQITSNFVPKEEFAQAIIQVDT--------KTG 703 Query: 589 LAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGI-- 646 R + E P + + QP P+ ++ + N I Sbjct: 704 EYWENERLRLINESIEKANPMKHVDAENMKKIQPLPPIQEGEIEQNNSIETNEEHQHIVS 763 Query: 647 -EQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINV 703 E K + E P +++ G V D + + + DI++ + ++V+ ++ Sbjct: 764 LEDYKGQKSQNETLSNDPAAMNQQGNVDD-----EVENKLYEDIKEFIIESQQVSPSL 816 >UniRef50_C1XZF6 Type IV secretory pathway, VirD4 component n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZF6_9DEIN Length = 776 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 67/483 (13%), Positives = 146/483 (30%), Gaps = 44/483 (9%) Query: 131 SWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCL 190 + + + E+ N + + + IG +P E+ + + Sbjct: 76 ALYSALRARYADARELRRMTLTPANRALALPLARLSPDKGEPLIGSVPTPAKKELDHLLV 135 Query: 191 HGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK--SYYDP---SIDKILNPLDARC 245 GK IR+ G V+ D G+ + + +L+P + Sbjct: 136 VAPTRGGKGLHIRQTLW---HWGGSAVVVDLKGDAYRETALRREELGGRCFLLDP-EGYG 191 Query: 246 AAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLV 305 + +D + E + + A ++ +DP + + YL + + S + Sbjct: 192 SCYDPFSEMVRDESVASAAQLMMVSAQDKDPIFSERASYLMEAFIYLAQYRQESTTSLMY 251 Query: 306 DTLLSIK----------------IEKLRTYLRNSPAANLV---EEKIEKTAISIRAVLTN 346 + + ++ R L + A +K +K S + Sbjct: 252 GLMSRGEDAVYLEFKRLKQQPPLPDRPRELLEKAIARFNFFYGSDKDDKFRASCYGTFST 311 Query: 347 YVKAIRYLQG-IEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 + + FT RD + ++ L+I + + K ++ + +S Sbjct: 312 RARPLVSEGVRAMTQRSDFTARDLI------ERPTTLYIRLSEENLDFTKGIVQILISTL 365 Query: 406 IRGLLAMGENR-----NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL 460 L + V F DE + +P + + +Q +QL Sbjct: 366 TGQLTRTIDREQGGYARVPVLFVFDEAKRIP-IPSIANGVSTWAGRNMYAAIYVQDMSQL 424 Query: 461 EDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGV 520 E YGE A ++ + +P+ + A++ + ++G S Y+ Sbjct: 425 EGTYGEGDAKTVLANTAQIFYLGNPNLETAQYVSQKLG--RIEVPSYSYTAQRSKDGQSR 482 Query: 521 STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLS-LKYQTRPKVAPEFIPRDINP 579 S ++ L+S D + + V P L + + A P I Sbjct: 483 SMSYNLREVDLLSVDDFLAGTNDEVVVFPRAARPVRAWRVLPPEEMRQYARAPEPPRIAR 542 Query: 580 EME 582 + Sbjct: 543 SPD 545 >UniRef50_A6BIV1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A6BIV1_9FIRM Length = 436 Score = 222 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 81/411 (19%), Positives = 145/411 (35%), Gaps = 40/411 (9%) Query: 177 LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQR---GDMVVIYDRSGEFVKSYYDPS 233 +PI ++ L G +G GKS + R D+++I+D G+F K +Y P Sbjct: 43 IPIGEHILSRHMLLLGGIGTGKSNAFNHIIRNTRSNLTNEDVMIIFDTKGDFYKEFYRPG 102 Query: 234 IDKILNPLDARC------AAWDLWKEC----LTQPDFDNTANTLIPM--GTKEDPFWQGS 281 I N DAR W++++E + + A PF+ + Sbjct: 103 DVVISN--DARATGGSEADYWNIFEEVTIDDRVEENILEIAKGFFAEKLEHTTQPFFPNA 160 Query: 282 GRTIFAEAAYLMRNDPN----RSYSKLVDTLLSIKIEKLRTYLRNS----PAANLVEEKI 333 + +FA + + R+ L L SI + L + + ++ Sbjct: 161 AKDLFAALMLHLVRNDKFADKRNNKSLRSYLNSITPHIMVDILNQHSDLKAMQSYIYDEK 220 Query: 334 EKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHAS 393 + + A L ++ I G ++R +R + +F+ + Sbjct: 221 SGQTLGVMAELQQMMREI--FIGNFQKKGGLSMRKLVR----RKGGRVIFVEYDLGIGGM 274 Query: 394 LKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFG 453 L P+ + + +AI+ L N V+FF DE + L + + + R G + G Sbjct: 275 LMPIYRLLIDLAIKEALCRTSNEGN-VYFFIDEFRLVPHLEHIDDGVNFGRSLGAKFFVG 333 Query: 454 IQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGA 513 IQ+ Q+ YGE S+ T FR E+ G + +Q SY + Sbjct: 334 IQNIDQVMAAYGEYTGRSILSGFGTTFAFRVNDVGSREYIKNLFG-----RNIKQQSYMS 388 Query: 514 DPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 G + + +V DI +LP V+ P P + Sbjct: 389 KVQNRG--IAEQLREGYVVEDDDINNLPVGEAIVSAPSGEPF-RFKFNLYQ 436 >UniRef50_Q0GU00 TraG n=1 Tax=Lactococcus lactis RepID=Q0GU00_9LACT Length = 611 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 79/530 (14%), Positives = 166/530 (31%), Gaps = 64/530 (12%) Query: 133 ILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHG 192 + + + + ++ P++ ++ + +P + +N L Sbjct: 95 WATKGQLKPFQVKPPKVKKGETPPEEDMNIILSKDIKMSLPTHSMPF-KYQRNKNILLIA 153 Query: 193 TVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV----KSYYDPSIDK-ILNPLD-ARCA 246 GAGK+E+ + Q V+ D G+ + K + N D + Sbjct: 154 GAGAGKTEMF--VKPNLSQLHSSYVVTDPKGKLLHETGKMMAEHGYTIKCFNVNDFSNSN 211 Query: 247 AWDLWKECLTQPDFDNTANTLI-----PMGTKEDPFWQGSGRTIFA----EAAYLMRNDP 297 ++ +K + +I K +PFW S + + Y +++ Sbjct: 212 KFNPFKYIRDEVTLKRVIQCIIDATNGENSKKGEPFWDKSEELLLSSLFSMLYYNYKDEV 271 Query: 298 NRSYSKLVDTLLSIKIEKLRTYLRNSPAANL--------------------------VEE 331 R+ K ++ ++ L L + + Sbjct: 272 ERNPDKEIELPKLYEVSDLIRLLNRTDEETPSPLELAFEEFEEDFGSDNYAVTQFNSFKN 331 Query: 332 KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP-FTIRDWMRGVREDQKNGWLFISSNADT 390 KT S+ A+ T E + I W+ K +++ D Sbjct: 332 YKGKTRSSVLAIATARFSMFDLKDIREVLDDDELDIDSWID------KKTIVYLPI-PDM 384 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRR-----VWFFCDELPTLHKLPDLVEILPEARK 445 + + +M +A R L +N + V F DE L K+P++ E L R Sbjct: 385 DTTFNFLTTMIFVLAFRTLEYKIDNIPPKNEYLHVRFILDEFANLGKIPNIKEALAVFRS 444 Query: 446 FGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFF-RSPSHKIAEFAAGEIGEKEHLK 504 +Q+ QL +Y + S +T + S + +F + G++ Sbjct: 445 REMSVNIILQNLNQLRALY-KDDWQSFVGNCDTIMYLSGSTEPETEKFFSERAGKETIDM 503 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQT 564 + + G S D+ + L++ ++ LP C +++ P K Sbjct: 504 RKQTENRGGQG---SYSINHDVLGRDLITKDEVNRLPRDECLISIS-SMPIYKGKKFKFN 559 Query: 565 RPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGE 614 K + E+ R N E V + + +L + + E + + Sbjct: 560 GHKRSSEW-SRSSNDENWFDFKPVHKKKIVNVVEEETLKDDEYVENIYSQ 608 >UniRef50_Q9F531 TraK protein n=8 Tax=Gammaproteobacteria RepID=Q9F531_ECOLX Length = 652 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 83/585 (14%), Positives = 179/585 (30%), Gaps = 94/585 (16%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 H + + V A + LI F + I+ +V G Sbjct: 48 FHSVISTFSGNPQYKKLVFMAWFGFSVPLIFFAIFMLIVVI---GIMPKKVIYGDARLAT 104 Query: 156 PKDVARMLKKDGKDSDIRIGDLPIIR-----------DSEIQNFCLH-GTVGAGKSEVIR 203 D+++ K S + + I + Q F + +GK I Sbjct: 105 DMDLSKSGFFPDKKSPYKHPPILIGKMFKGRYKKQFIYFAGQQFLILYAPTRSGKGVGI- 163 Query: 204 RLANYARQRGDMVVIYDRSGE---FVKSYYDPS---IDKILNP------------LDARC 245 + +VI D E + + P R Sbjct: 164 -VIPNCVNYPGSMVILDIKLENWFLSAGFRQKELGQECFLFAPAGYAETIDQAIKGQIRS 222 Query: 246 AAWDLWK-----ECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR- 299 W+ + L + D A LIP DP W S R +F + + Sbjct: 223 HRWNPLDCVSRSDLLRETDLAKIAAILIPASD--DPIWSDSARNLFVGLGLYLLDKERFH 280 Query: 300 ---------------SYSKLVDTLLSIKIEKLRTYL-RNSPAANLVEEK----------- 332 S S ++ T + + L ++ + + + +K Sbjct: 281 LEQEAKGHNVPDVLVSISAILKTSVPDGGKDLAAWMGQEIENRSWISDKTKSFFFKFMSA 340 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 ++T SI ++ + E N F IRD +K +++ D Sbjct: 341 PDRTRGSIETNFSSPLSIFSNPITAEATNFSDFDIRDI------RKKPMSIYLGLTPDAL 394 Query: 392 ASLKPVISMWLSIAI----RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFG 447 + + +++++ S+ + R L + + DE ++ K + + + Sbjct: 395 ITHEKIVNLFFSLLVNENCRELPEHNPDLKYQCLILLDEFTSMGKSEVIERAVGFTAGYN 454 Query: 448 GCYVFGIQSYAQLED--IYGEKAAASLFDVMNTRAFFRSPSHKI-AEFAAGEIGEKEHLK 504 ++F +Q+ Q + +YG++ + + ++ S A+ + EIG ++ Sbjct: 455 LRFMFILQNEGQGQKSDMYGQEGWTTFTENSAVVLYYPPKSKNALAKKISEEIGVRDMKI 514 Query: 505 ASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT---------CYVTLPGPYPA 555 + S G + D+ + ++ +I SL D +T P Sbjct: 515 SKRSISSGGGKGGSSRTRNDDVIERPVLLPEEIVSLRDKKNKARNIAIREIITSEFSRPF 574 Query: 556 VKLSLKYQTRPKVAPEF-IPRDINPEMENRLSAVLAAREAEGRQM 599 + + + P+ I R+ + ++ N + + A+ ++ Sbjct: 575 IANKIIWFEEPEFKRRVDIARNNHVDIPNLFTQEVMDEIAKIAEI 619 >UniRef50_Q8GJE7 VirD4 n=1 Tax=Campylobacter jejuni subsp. jejuni 81-176 RepID=Q8GJE7_CAMJJ Length = 628 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 97/600 (16%), Positives = 175/600 (29%), Gaps = 97/600 (16%) Query: 111 AFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK-- 168 A L A VA+ ++ F V Q + G KD M + + Sbjct: 56 ALKLKAYVAVFALILPFIVCLIWFFMP---QMNLKENYGNARFAKEKDFEEMNICNDRGL 112 Query: 169 ------DSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRS 222 I+ ++ IR + + G GK+ I + + + D Sbjct: 113 ILGCNIKKGIKGDEIEYIRAKMPLSALVVAPPGTGKTSGI--ILPNLFTVPNSTLALDIK 170 Query: 223 GEFV------KSYYDPSIDKILNPL-DARCAAWDLWKE--------CLTQPDFDNTA-NT 266 GE + Y + + P D ++ + D A Sbjct: 171 GELYAKSAGYRKKYFNNEILLFEPFSDNNTLFFNPFDNSIVKDMNFIQMMKLADQIAGTI 230 Query: 267 LIPMGTKEDPFWQGSGRTIFAE-AAYLMRNDPNRSYSKL--------VDTLLS------- 310 + KE W S +T+F A Y M+ + S L + L Sbjct: 231 FVAEKGKEGDHWVTSAKTLFTFFALYNMQKHKHTSLGDLTQAPKKDYFNELNEEFGKECL 290 Query: 311 -------------------------IKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLT 345 E L +RN A + E+ SI++ Sbjct: 291 IEDEDTGEVSRDYNVDTFKVFLKQVANDENLDEIVRNQARA--YQTAAEQEFASIKSTYD 348 Query: 346 NYVKAIRYLQGI-EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 Y+K Q + F D +K +++ + L P++ +++ Sbjct: 349 TYMKVFTNPQVANATSKMNFRFEDL------REKRITMYVVIQTEDMDILAPLVRIFIES 402 Query: 405 AIRGLLA--MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 + L++ N ++ ++ DE K+P L+E R +G VF QSY Q+ Sbjct: 403 LFKKLMSGQENSNPDKFIYCLLDEFVRFGKMPFLLEAPALCRSYGLIPVFVTQSYEQIRK 462 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 YGE + + FR + K A+ + IG+ + S G + Sbjct: 463 YYGEDDLGIIRANAGYQTIFRMNTEKDAKEISDLIGDFT--REKTSSSKGTFDFFKSNN- 519 Query: 523 GKDMERQTLVSYSDIQSLPDLTCYVTLPG--PYPAVKLSLKYQTRPKVAPEFIPRDINPE 580 E L++ DI++ + + G P + PK+ Sbjct: 520 TVSKEGYKLITSQDIKNQSSEDILILVTGFLSRPIKAKVPYWFKNPKLKGA--------- 570 Query: 581 MENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVN 640 +++S EG D + V+ E E + + Sbjct: 571 --DKISLEDNNTNTEGESKNDEINNDDSQNVNQEQNFTQENSSSKQIFELEELGIKVKKE 628 >UniRef50_A7BSA0 TraG/TraD family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSA0_9GAMM Length = 667 Score = 221 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 94/531 (17%), Positives = 182/531 (34%), Gaps = 43/531 (8%) Query: 129 VVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNF 188 +++++ + ++ + K ++ + + Sbjct: 71 LIAYLNTKNYGNGKDDIFIDNFRFVQEAKMFLYSQNHSIDVEKLQKITVRFCPRDFTKTV 130 Query: 189 CLHGTVGAGKSEVIRRLAN--YARQRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCA 246 G +G+GK+E + N + + V+I+D G++ + Y D I NP D R A Sbjct: 131 FALGGMGSGKTEFFFSILNENWGYRHFKRVIIHDPKGDYTEKLYRSDQDYIFNPYDKRGA 190 Query: 247 AWDLWKECLT-QPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR-NDPNRSYSKL 304 AWD+W + + LI T+++ F+ S + E + +S + Sbjct: 191 AWDIWADMHAYPVLIVSFLKNLIESQTQKEDFFSSSAVNVLKEYFMETHFSAKGKSSVEK 250 Query: 305 VDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN--GE 362 LL +K+ TY + S T SI + + ++ +R L I + Sbjct: 251 WRILL----DKIDTYRKQSAGKP--------TEGSIYSTIALAIETLRLLAFIATTNPKK 298 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWF 422 F+IR ++ LF+ +N A L + +LS+ LL+ + Sbjct: 299 QFSIRYFLSSSGSK-----LFLLNNPAYSAPLNALFVGFLSVITEALLSQPDTTGNLSLL 353 Query: 423 FCDELPTL-HKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAF 481 DE +L ++L + R GG + G Q + + + +S F F Sbjct: 354 VLDEFLSLKFNQETKTKVLTQIRSKGGALLLGAQFLPKENKLEQQLLDSSRFA----LIF 409 Query: 482 FRSPSHKIAEFAAGEIGEKEHLKASEQYSYG-----------ADPVRDGVSTGKDMERQT 530 FR + GE E+ + G +G+S ++++ Sbjct: 410 FRLSDIETVNHIQEMFGEIEYTHYENSINEGENSNWSIPFSIGGGKNEGMSINTSLQKRK 469 Query: 531 LVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLA 590 + +QS+P +P KV F+ RD+ + + V Sbjct: 470 FIKPEMLQSMPQYHHITFIPEDNIIYLGYTPLVQLEKVNRAFVQRDLTLFYQKPFNVVGD 529 Query: 591 AREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNV 641 + + + +P +T+ Q P +P ND + DS N Sbjct: 530 LPSQKRNERSETQKPRKVVAK----LTKTPQSIVPKTPEENDIQVDSLGNE 576 >UniRef50_A7ICP8 TRAG family protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ICP8_XANP2 Length = 509 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 58/458 (12%), Positives = 135/458 (29%), Gaps = 65/458 (14%) Query: 163 LKKDGKDSDIRIG--DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD 220 + I +G +I + ++ GKS + N V+ D Sbjct: 45 YDPNNPGGKILVGAIGDRLIGIDDNRHVMTVAGSRTGKSVT---VVNNLLFYPGSVLALD 101 Query: 221 RSGEFV----KSYYDPSIDK-ILNPLDARC-------AAWDLWK--ECLTQPDFDN---T 263 GE + IL+P + +++ + + +N Sbjct: 102 PKGELAAITAERRAALGQKVCILDPFNIVPERLARYRVSFNPLMLLDPAGETVIENAGLI 161 Query: 264 ANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRN----DPNRSYSKLVDTLLSI----KIEK 315 ++ L+ + DP W S R + M + R+ L D L E+ Sbjct: 162 SDALV-IAGGRDPHWDESARVLIEGLLLHMATAPALEGRRNLIALRDLLGEALKTTGDEE 220 Query: 316 LRTYL-------------RNSPAANL----------VEEKIEKTAISIRAVLTNYVKAIR 352 ++ R A+L E+ S+ + + K Sbjct: 221 DDPFVLEYAMLSNAARLQRAPETAHLGHILERSARDFYERPANERASVLSTARRHTKLFD 280 Query: 353 YLQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLA 411 + G F + + + + +++ A + +++++ + + Sbjct: 281 FSAMARVLEGHDFDLSEL----KTTKGGMTVYLCLPASRMGLCSRWLRLFINLLLEAMER 336 Query: 412 MGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAAS 471 V DE P L + + + + FG +Q + Q + +Y ++ + Sbjct: 337 ERTPVACPVLACLDEFPVLGHMRQIEDAAGQIASFGVRLWIILQDWGQGKALY-KERWET 395 Query: 472 LFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTL 531 FF + + E+ + +G+ E + V + +E+ L Sbjct: 396 FAGNAGIMQFFGNNDLQTTEYVSKRLGKTIVKVTRESEAGTDQRVSGITGRSESIEQFDL 455 Query: 532 VSYSDI-QSLPDL----TCYVTLPGPYPAVKLSLKYQT 564 ++ ++ + V G P + ++Y Sbjct: 456 LTPDEVSRQFARGDRLKRQLVLWAGYNPLMLQRVEYFN 493 >UniRef50_Q8VRC7 TraK-like protein n=2 Tax=Haemophilus influenzae biotype aegyptius RepID=Q8VRC7_HAEIN Length = 610 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 78/539 (14%), Positives = 153/539 (28%), Gaps = 80/539 (14%) Query: 104 CSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARML 163 + + AA + LVI LI + + G +Q E D A +L Sbjct: 63 TPKATKGYILGAAGIGLVITLIPLILFIAVF--FGLKQKEEIYGSASFAKDFDIRKAGLL 120 Query: 164 KKDGKDSDIRIGDLPIIRD-SEIQNF------CLHGTVGAGKSEVIRRLANYARQRGDMV 216 + ++ + I + + +F L +GK I + D V Sbjct: 121 PTPKQRKGLKYPSILIGKYKDKFLHFAGQQFLYLAAPTRSGKGVGI--VIPNLLNYADSV 178 Query: 217 VIYDRSGE---FVKSYYDP--SIDKILNP------------LDARCAAWDLWKECLTQP- 258 V D E F + + + +P + + ++ Sbjct: 179 VCVDIKFENFLFTAGFREKCGQNVFLFSPDGFAESEEMRKNGEIKSHHYNPLHYIRRDMK 238 Query: 259 ----DFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN------------RSYS 302 D + L P D W G + + + Sbjct: 239 YRDGDVQKIVDILFPPDP--DEPWNGLAGNFTKGLICYLLDTEQNQLDEKKWNSNIKVIK 296 Query: 303 KLVDTLLSIKIEK------LRTYLRNSP--------AANLVEEKIEKTAISIRAVLTNYV 348 + ++ + +K + L+ A + T S R+ + Sbjct: 297 PTIPLMMKLGTDKGGYSSFIERALKEHEDGENPLSEATRSAFNEFLGTHDSGRSSIMMTF 356 Query: 349 KAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAI-- 406 A + + D+ ++ +++ + D + +I+++ S I Sbjct: 357 NAEMKVYTNPTCAAALSDNDFDFENLRRER-MSIYVGLSPDGLVTYSRLINLFFSQLIMV 415 Query: 407 --RGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQL--ED 462 R L + +V DE P L + L + + + Y+ +Q +AQL Sbjct: 416 NTRTLPEYDSSLKYQVLLVLDEFPALGAVNILADAIGFTAGYNVRYLIIVQDHAQLCSPK 475 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHK-IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVS 521 +YG++ A +L R + + + +G K YSY S Sbjct: 476 LYGKERADNLRKNCMIRLVYPPKEVDATTKEISETLGYKTVTTKDTSYSYSNGKR--TRS 533 Query: 522 TGKDMERQTLVSYSDIQSLP---------DLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 ER+ L+ +I L L V + P + + Y P Sbjct: 534 VSTKRERRALMLPQEIVDLGTINYKNTSVALKEIVIMEKVKPFIADKIIYFDEPVFQQR 592 >UniRef50_A8ZL40 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZL40_ACAM1 Length = 575 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 94/577 (16%), Positives = 183/577 (31%), Gaps = 43/577 (7%) Query: 97 HDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSE-NEVTGGRQLTDN 155 L F + + + W ++ + T Q Sbjct: 7 QPPQPQSEGVDLSPLFSGPLPWLTGLLALIVIALWWFEDETRREPDDARWATRREQHRAK 66 Query: 156 PKDVARMLKKDGKDSDIRIG-DLPIIRDSEIQNFCLHGTVGAGKS-EVIRRLANYARQRG 213 + ++ + + +R+G D P+I + G G GK+ VI A ++ Sbjct: 67 MLGLKQIRDRKRDEIALRLGSDDPLILPDLQPLVTIVGGSGKGKTATVIELALADAIRQE 126 Query: 214 DMVVIYDRSGEFVKSY-------YDPSIDKILNPLDARCAAWDLWKECLTQPD---FDNT 263 ++++D G K + DP P +D K D + Sbjct: 127 HTLIVFDVKGTLKKKFIPFALKQPDPYECYCFAPGKRYSHGFDYLKFMQDADDSLRARSI 186 Query: 264 ANTL----IPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTY 319 A+TL I + + PF+ + + + + I + Sbjct: 187 ASTLSDNVIVNLSGKHPFFDNHAEYFLQALLMMAKRADYSDLPMVWALMGLPGIAERIQM 246 Query: 320 LRNSPAANLVEE----------------KIEKTAISIRAVLTNYVKAIRYLQGIEHNGEP 363 A + + + TA I A NY+ + Q I Sbjct: 247 ADQEGAFKVDSDLGMWVRQQLVGLMSVTGTQDTAGGILASGINYLLPMVNRQTIPCLSID 306 Query: 364 FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFF 423 + +F + + P++++ + + I+ L R+R F Sbjct: 307 GREPTQSTIPLDLPGKQIIFFELDGQAKKATAPLVAVAIHLLIQRNLNEDTERDRPFGVF 366 Query: 424 CDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFR 483 DE L LP E++ R +G +QSY+Q + Y + + S+FD +T+ F+ Sbjct: 367 LDEFARL-MLPSFEEVVSLDRSYGFYSFVSMQSYSQPKIKYQSETSESIFDNTSTQFIFK 425 Query: 484 SPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDL 543 S S+K+ E + ++GE S+ SYG + + S + +++ L++ SDI+ L Sbjct: 426 SGSYKVREDLSADLGEYTKHYHSKSRSYG--KMGNSRSRNEQEKKKRLITASDIKRLKKG 483 Query: 544 TCYVTLPG--PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMAS 601 T PG P K + R E ++ Sbjct: 484 EFICTNPGMDDRPIRMR----FNLKKRNGTDMQRFTECERMYNSHVHKQMVRIAQERVLD 539 Query: 602 LFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSG 638 E + + + D Q+ S + ++ + Sbjct: 540 SPEQIMSDRMVSAD-ALLPSTQEVESHKLKQQEEKAA 575 >UniRef50_D2QVF5 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVF5_9SPHI Length = 633 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 78/492 (15%), Positives = 155/492 (31%), Gaps = 66/492 (13%) Query: 101 MIWCSEQLWSAFVLAAVV-ALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 ++ + + F V A V L V W+L Q K+ + G Sbjct: 99 LLGMAHRFPYQFRYIVPVGAGVSTLFGIGVGFWLLRPQPKRPITEDRKAG---------- 148 Query: 160 ARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVI-RRLANYARQRGDMVVI 218 + K G G I + + + G G+GKSE + + A + ++ Sbjct: 149 ---VSKKGFQFRTMSGGW-IKIPNPFRGVFITGGPGSGKSESLAKPFIRQAFAQNYCGIL 204 Query: 219 YDRSG-EFVKSYY-----DPSIDK---ILNPLDA-RCAAWDL------WKECLTQPDFDN 262 YD E K Y +P ILN D R + + Sbjct: 205 YDVKFPELTKYAYHYRKLNPDATTQFCILNFQDMNRTHRLNPIAPENLLSITYAEEYALA 264 Query: 263 TANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYL 320 L ++ FW S + + +R + V + + +KL T + Sbjct: 265 LIKNLQQETIEKQDFWSRSCTAVLTGLIWYLRKHHPAQCTLPHAVTLITKMPYDKLMTMI 324 Query: 321 RNSPAANL---------VEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRD--W 369 S + L + K + L + + + + D + Sbjct: 325 -GSDSECLSYVMSVITAIGNKSADQLSGVIGTLQVMLAKLATPEVFW----VMSATDEGF 379 Query: 370 MRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPT 429 + K +L + + + SL+P++ ++ ++A++ M DE PT Sbjct: 380 SMDLNNPNKPIFLCLGGDREVMDSLRPLLGLYSTVALK---RMNRQGKHHSILLLDEAPT 436 Query: 430 LHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKI 489 ++ +P+ +I R V+ Q +Q+ YGEK + + ++ + + S + Sbjct: 437 IY-IPNFEQIPATGRSSQIATVYMCQDLSQVRKYYGEKESQMILGTLSNQFYGAVSSAET 495 Query: 490 AEFAAGEIGEKEHLKASEQYSYGA------------DPVRDGVSTGKDMERQTLVSYSDI 537 A + + IG+ E + E P R + + + +V+ D+ Sbjct: 496 ASYVSRLIGKHEVITPEESRDNSPAFDLGSLFDRRHQPQRGRSTISYRKQERPIVNPEDL 555 Query: 538 QSLPDLTCYVTL 549 Sbjct: 556 HEFDKGEFIGFT 567 >UniRef50_A3SLA3 TRAG protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SLA3_9RHOB Length = 647 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 77/523 (14%), Positives = 174/523 (33%), Gaps = 53/523 (10%) Query: 97 HDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNP 156 + ++ + A+ + V + I K + + Sbjct: 24 TWPLVAKAPHGADWGLIVWGLGAVATIAGVYGVTAEITALATKVSRTFRAHRPKVSPASA 83 Query: 157 KDVARMLKKD---GKDSDIRIG---DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYA- 209 K ++ + GK + + +G P+ + + + GK+ + Sbjct: 84 KWLSAKEARKAGLGKSAGLFLGILEGQPLFISNAV-HGLTCAPARKGKTTSF--ILPALC 140 Query: 210 RQRGDMVVIYDRSGEFVKSYYDPSIDKI------LNP---LDARCAAWDLWKECLTQP-- 258 G ++ D G+ D + +NP A++ + L Sbjct: 141 HDFGASCIVADMKGDLAAQSADHRKSYLGQDVIEVNPANQFGRSNWAYNPMQIVLDAYAY 200 Query: 259 -------DFDNTANTL--IPMGTKEDPFWQGSGRT---IFAEAAYLMRNDPNRSYSKLVD 306 + + A L P G DPFW R A ++R+ + + ++ + Sbjct: 201 APQDTISEARSMALQLHAPPPGGDRDPFWPNGTRKKLVFTVVAQCVLRDAHDANIPRVYE 260 Query: 307 TLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVLTN-----------YVKAIRYLQ 355 L + L ++ A++++ ++ A +I++V ++++ Sbjct: 261 VLSDDVL--FGELLDDAIASDVLGGELAAMARNIKSVWEENPKHFESFREGALQSLAPFG 318 Query: 356 GIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN 415 D+ R ++ L++ + P + + + A+R L+ EN Sbjct: 319 PSGRLAPSMETCDF-RFSDLKKRKTTLYLICDYSRMDVFAPWLGLVIWAALRELVR--EN 375 Query: 416 RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDV 475 + V+F DE ++L L L +G +Q ++ YG +A +++ Sbjct: 376 NDTPVYFLLDEFTN-YRLSGLPNALTALGSYGIRCWMLVQELDEISRAYGREALSTILSQ 434 Query: 476 MNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYS 535 + + FF S + A+ + +GE+E SE + G V S + L++ Sbjct: 435 TDVKQFFGVASDQTAQLVSRMLGEEELS--SESFGLG-HDVLGIPSLNLGRRSKPLLTAD 491 Query: 536 DIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 I+ LP+ + + PA L + + P ++ Sbjct: 492 QIRRLPEDEQIIFIKNMRPAKLLKVGAHEIEPYRHQLKPNPLH 534 >UniRef50_B1X2K3 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X2K3_CYAA5 Length = 573 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 84/501 (16%), Positives = 171/501 (34%), Gaps = 50/501 (9%) Query: 138 GKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAG 197 G+ + +E+ R+ K + ++ K + + + + G AG Sbjct: 59 GRFANSSEIRKARR-----KGLRQIAKGKPNKVATHLDHIVLPDLQPA--IAIVGRSRAG 111 Query: 198 KSEV-IRRLANYARQRGDMVVIYDRSGEFVKSY----YDPSID-KILNPLDARCAAWDLW 251 K+ I +G + ++D G +K + + D + P ++ Sbjct: 112 KTRSMIDPGIKSGIDQGWTMAVFDVKGNLMKKHLPYAHRKGYDCYVFAPGFDYSDGLNIL 171 Query: 252 KECLTQPDFD---NTANTL----IPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKL 304 + D AN L G+K D F+ G + L + P Sbjct: 172 DFMESSADAKKGHEIANVLNLNFQEPGSKPDSFFSPQGVALLKTVFMLAKECPFPDLLSA 231 Query: 305 VDTLLSIKIE--------------KLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKA 350 L + +L +++ + A K ++TA+ I + + Sbjct: 232 WKILSLENLAGRLAAAHKSKAFEGELSSWIGEAAVALRSVSKADETAVGIVGTAVTHFQT 291 Query: 351 IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL 410 + I + + + +F + + A+ P+++ + + I+ L Sbjct: 292 LVDRSIIPCLLKS-------SIPLDLKGKQIVFFQIDEQSEAATSPLVAAAIHMLIKRNL 344 Query: 411 AMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA 470 R + DE ++ +LPD+ + ++G G QS +QL Y + A Sbjct: 345 NAFVKRKNTFGLYLDEFTSI-RLPDIESWINRFAEYGFSAWLGYQSNSQLRLRYSREYAE 403 Query: 471 SLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQT 530 S+ T+A F + + AE + +G KE +E SYG + R S M++ Sbjct: 404 SILSSCGTKAVFNTGHPETAEKFSSALGTKEVWYKNESRSYGKNGSR---SVTDHMQKIP 460 Query: 531 LVSYSDIQSLPDLTCYVTLPG-PYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVL 589 L+S I C + PG Y +L + + + + + + ++ +VL Sbjct: 461 LISGPAINRFEQGECVILNPGLDYRPYRLKVPIKKKNDE----LWSKCEHQWDTQIKSVL 516 Query: 590 AAREAEGRQMASLFEPDVPEV 610 A + + E D E Sbjct: 517 AKQAELRLDLPGPLESDTAEE 537 >UniRef50_C2HF17 Putative uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HF17_PEPMA Length = 432 Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 75/419 (17%), Positives = 157/419 (37%), Gaps = 41/419 (9%) Query: 162 MLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYA---RQRGDMVVI 218 LK +G+ ++ + D ++ + G+ G+GKS + + D+++I Sbjct: 24 FLKFEGEKDG-KMASFTMSEDQLSKHLLMLGSTGSGKSTLFFHIIKQLKAQMTNEDVMII 82 Query: 219 YDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQ--------PDFDNTANTLIPM 270 +D G++++ +++ D ++ + + W+++++ L + + +L Sbjct: 83 FDTKGDYIQRFFENG-DLFIDNITDTSSKWNIFRDILADGTDDEHIKQNCNEICKSLFKE 141 Query: 271 GTKE--DPFWQGSGRTIFAEAAYLMRNDPNRS---------YSKLVDTLLSIKIEKLRTY 319 K + F+ + + + + + ++L L S K++ Sbjct: 142 RVKNTTNAFFPNAASDVLSSILLSLTRAGVQDKNVRKKMFYNNELRSLLDSCDENKVKAM 201 Query: 320 LRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYL-QGIEHNGEPFTIRDWMRGVREDQK 378 L + V I + VL+ +R + G F+IR+++R ++ Sbjct: 202 LASHKDLVAVNSYISYPGPQSQGVLSEMFSVVRDIFVGNFAKKGNFSIRNFVR----NKG 257 Query: 379 NGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVE 438 LFI + SL P+ + A++ ++ + V+ CDE + L + + Sbjct: 258 GKTLFIEYDLAKGNSLTPIYRLCFDQALKEAMSRNQKTGN-VYLICDEFKLIPLLEHIED 316 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 + R G + GIQS QL DIYGE A ++ +T FR+ E+ + G Sbjct: 317 GVNFGRSMGLKILAGIQSIEQLVDIYGESRAMNIMAGFSTLISFRTNDMASREYVSNLYG 376 Query: 499 EK-EHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAV 556 + + + R G + V SLP V LP P + Sbjct: 377 KNLIIEDYQKSDLTMVEEKRLGQT----------VEDWHQNSLPVGQAIVGLPFSQPFI 425 >UniRef50_A7B3W9 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7B3W9_RUMGN Length = 752 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 79/658 (12%), Positives = 199/658 (30%), Gaps = 66/658 (10%) Query: 100 YMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDV 159 Y+I Q W + + + + + V + + +Q V G + + K + Sbjct: 46 YVILHPLQNWWNDLTFTFMGIALIVWIGIVTYLMDYYRNRQVG---VEYGSEQWADIKQI 102 Query: 160 AR-MLKKDGKDSDIRIGDLPIIR-DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVV 217 R ++ K+ + + ++ + N + G G+ KS + + A V Sbjct: 103 QRTLMNKEETKNTLLSQNVAVDNGKLSNMNMLVIGNSGSYKSTTL--VIPNALLASMTNV 160 Query: 218 IYDRSGEFVKSYY-----DPSIDKILNPLDAR-CAAWDLWKECLTQPDFDNTANTLI--- 268 D GE ++ K+ N ++ W+ + + L Sbjct: 161 FLDIKGELLRKTGKYLQNQGVTIKVFNLINPEESDRWNPFVYIRDEVGLVKLITNLQEAV 220 Query: 269 --PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNR------------SYSKLVDTLL----- 309 P K DPFW + R + +++ Sbjct: 221 KPPDAMKGDPFWDQAVSLYLMSLFSYEWLRQEREKKEHPEQYQAATLPRVLALANLEMQP 280 Query: 310 -----SIKIEKLRTYLRNSPAANL----------VEEKIEKTAISIRAVLTNYVKAIRYL 354 S ++++ L A+ + ++T + ++ ++ Sbjct: 281 GTEEGSTRLKERMDRLAKDYGADYPPVRDYRKLKGNMEAQETVSCVILMVNAMLRLCEIP 340 Query: 355 QGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG 413 + I+ G D S +ISM+ + L+ Sbjct: 341 AIKRILESDDMDIKSLGTGADGIPGKKTALFLVMPDNDPSFNFLISMFYTTMFDVLIHAA 400 Query: 414 ENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 ++ R V + DE K ++ R V +QS AQ + ++ + Sbjct: 401 DHEYRGALPIHVRLWADEFYAGPKPTRTEVLMGTIRGRNMSIVPILQSIAQAKALFPQDK 460 Query: 469 AASLFDVMNTRAFF--RSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDM 526 + + + +F + IGE ++ +YGA V+ Sbjct: 461 WEIFIENCAVLIYMGSGPAAKSTHKFISELIGEMTIDVRNDGRTYGAHG---NVNIQNQK 517 Query: 527 ERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLS 586 ++L++ + ++ + C + + G YP + P+ + E S Sbjct: 518 LGRSLMTPAAVKRMSRENCILFIEGQYPVFDQKVIPFQIPRWKEM---EKLAGEDGYHHS 574 Query: 587 AVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDS--GVNVPAG 644 + E + + + + + E ++ + + + ++ +N Sbjct: 575 VKVIFDEEKRTYFTIETKKQIQFLSKEQSEAYKEMAKKDDTIYYREIEKEAFLYLNFRKY 634 Query: 645 GIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNIN 702 E ++ ++E+Q + + E+ + + +++ ++E +++ Sbjct: 635 PKPTEEEITKAFQVERQARIDLLKQQELPEDVKLYQEMEGQESPKEERDSNKQERDLS 692 >UniRef50_D2P3C7 Putative uncharacterized protein n=1 Tax=Listeria monocytogenes 08-5578 RepID=D2P3C7_LISMO Length = 821 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 92/726 (12%), Positives = 221/726 (30%), Gaps = 115/726 (15%) Query: 36 FFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQV 95 F GL + F Y L RD I + + I+ +T ++++ Sbjct: 51 FIATTPGLFMVFCFMAFVFYCAANYV-AGILLAFRDKIAATGHFTIEGGMETPKVDS--- 106 Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQL--- 152 M+ +L + +++AA++ L++ + ++ G+ K Q + + Sbjct: 107 -----MLQFHPELKTVYMIAALMLLIVSIRMMTLIKENFGKIAKGQKDTSQLTSNRAMFL 161 Query: 153 ----TDNPKDVARMLKKDGKDSDIRIGDLPIIR----------------------DSEIQ 186 + LKK + + +G D Sbjct: 162 QYRAVPERTPINEPLKKISGEGGVVVGRYNFPEWQKKWVHILSRGKKDLMDLVFIDDSPV 221 Query: 187 NFCLHGTVGAGK--SEVIRRLANYARQRGDMVVIY-DRSGEFVKSYY-----DPSIDKIL 238 N L GK S ++ + Y+R ++ D GE IL Sbjct: 222 NNLLVAGTRGGKGESWIVPTIDLYSRATEQPSLVLNDPKGELAAMMKETLEMRGFEVLIL 281 Query: 239 NPLD-ARCAAWDLWKECLTQP---DFDNTAN-------TLIPMGTKEDPFWQGSGRTIFA 287 N +++ + + DFD AN TL DP W+ S R++ Sbjct: 282 NMYQRENSMSYNPLQLIIDAYKSGDFDTAANLCNTLTYTLYHNPKSTDPIWEDSSRSLCK 341 Query: 288 EAAYLMRND-------PNRSYSKLVDTLLS------IKIEKLRTYLRNSPAANLVEEKIE 334 + + + L + +L Y ++ P + ++ Sbjct: 342 AMILAICEKALKEGTPEKITMYTVARMLQDLGQSEGDEPNQLDEYFKSLPDGSPAKDAYA 401 Query: 335 -------KTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVRED---QKNGWLF 383 K+ SI + ++ + + + + + V + +K +F Sbjct: 402 TSKFSEGKSRSSIFFSANSKLEIFTDSGTAKLTSQNSLKLEEIAKKVNSNGAEKKPIAIF 461 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLL-----AMGENRNRRVWFFCDELPTLHKLPDLVE 438 + D + V S+++ L +R V F DE ++ + ++ Sbjct: 462 MVI-PDYDPASHIVPSIFVGQLYFTLAKYATSRPSGKLDRLVVFMLDEFGSMPTIDNMAG 520 Query: 439 ILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIG 498 + + IQ+ Q++ YGE +++ + + +E+ + IG Sbjct: 521 NMTVCLGRNIRFNLIIQALQQIKAKYGEDE-STIIGNCGNQFLISTLDKPTSEYFSQSIG 579 Query: 499 EKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL 558 + + ++ K ++ + L++ ++ + + + V L Sbjct: 580 KHTIVIKVKRD--------------KRIDTRELLTPTECRQMEEGD-LVLLRSTKRRSLN 624 Query: 559 SLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQ 618 + + + P+ + L+ + + + V+ + +T Sbjct: 625 NRRIRPYPRYN------HGDTNRMKYRYEYLSDLYDNSKSINDVKTICTHSEVNPDSLTI 678 Query: 619 AEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKP----EEEMEQQLPPGISESGEVVD 674 + ++ + +++E K P +E + +Q P + + V Sbjct: 679 KNFTVLQAIREEQRQAENARL--KQKSLKREKKSAPIIALDEAILRQNPETVQDEPTVYT 736 Query: 675 MAAYEA 680 ++ Sbjct: 737 TSSALE 742 >UniRef50_Q2K8S6 Probable transport secretion system IV, VirD4 protein n=2 Tax=Rhizobiales RepID=Q2K8S6_RHIEC Length = 519 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 62/494 (12%), Positives = 131/494 (26%), Gaps = 57/494 (11%) Query: 139 KQQSENEVTGGRQLTDNPKDVARMLKKD---GKDSDIRIG-----DLPIIR----DSEIQ 186 +Q ++ G +D+ L+ I +G I Sbjct: 34 RQIADPPPLYGSARWPTSQDLRAYLRDRTAFDDPRSILLGAFSDEGQTIPPGFVHWDGDG 93 Query: 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS----YYDPSIDKILNPLD 242 + +GK + + + V+ D GE ++ + PLD Sbjct: 94 HLLTIAPTRSGKGKT--TIIPNLLRYQGSCVVLDPKGELFEATSQWRSKLGPVYRIAPLD 151 Query: 243 ARC----AAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN 298 +D + D A + P K F+ +R Sbjct: 152 GGSGKPVHRFDPVSRVRRESDARAIAMQMFPHDPKSPAFFADDAVGFVTAIIMFVRYKAP 211 Query: 299 RSYSKLVDTLLSIKIE---------KLRTYLRNSPAANLVEEKIE-KTAISIRAVLTNYV 348 L ++ ++ T+ ++ AA + EK + ++ LT+ + Sbjct: 212 PHRQTLATVCQMASLKGASLLQIAKQMETFQPSADAARTILEKDPTRGLKVLQETLTSKL 271 Query: 349 KAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRG 408 + + + + ++I D + + + L A+ Sbjct: 272 YEWKDVDIQRSVSGS-----DVSFESLKDRPATVYIEIPFDMMKTFSGWLRVLLKSALDA 326 Query: 409 LLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKA 468 +LA V F DE + P+ + + G F +Q +E+ Y + Sbjct: 327 MLANPRIPELPVLFVLDEFLNIGPFPEYRDAIRTHAGAGIRLWFFLQDIYSIEEHYPGNS 386 Query: 469 AASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS----------YGADPVRD 518 + FF A+ G +G K H + S YG Sbjct: 387 WRPFL-NCAVKQFFGINDDDTAKMIGGYLGHKTHAVRTTGGSANVSSHLRDLYGDASTNT 445 Query: 519 GVSTGK--DMERQTLVSYSDIQSLPDLT-------CYVTLPGPYPAVKLSLKYQTRPKVA 569 S + + L++ +++ L + G P + ++ Sbjct: 446 SFSMTEGVQFLGRPLLTSDEVRELLGGWQGDGWRYGITDIAGTRPFKTQLVVHEKSETCR 505 Query: 570 PEFIPRDINPEMEN 583 + Sbjct: 506 QRIGMMMQGDDKWP 519 >UniRef50_A8ZPT9 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPT9_ACAM1 Length = 591 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 90/567 (15%), Positives = 179/567 (31%), Gaps = 73/567 (12%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 ++ + L+ ++ Q K + K AR L + K + + + Sbjct: 37 LLMGGCMALLLVPMLFQKYSGQRKGILARARFATAREIHQSKIYARKLIQQNKHNKVALW 96 Query: 176 --------------DLPIIRDS-------EIQNFCLHGTVGAGKS-EVIRRLANYARQRG 213 + I D+ ++ + G G+GKS V+ +RG Sbjct: 97 IQEPKGIIINHQKRQIEIPPDNNSFYVSHLEEHSLILGNTGSGKSYSVLDPFKRSVIKRG 156 Query: 214 DMVVIYDRSG-EFVKSYYDP------------SIDKILNPLDARCAAWDLWKECLTQPD- 259 + YD G E P ++ P +++ D Sbjct: 157 QPLFDYDYKGHEESPHSLAPSSSIAGYALDHGYKVYVVAPGFPDTDKFNILDVLKHPQDG 216 Query: 260 --FDNTANTL-----IPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIK 312 +N L + + F+ +G + L++ + L +L++ Sbjct: 217 ANAFQLSNVLNENFKLSASDQGADFFSLAGNQLIQALFMLVKGSEVCADIALAHKILALP 276 Query: 313 I-------EKLRTYLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFT 365 +L Y + + L +TA SI + + + T Sbjct: 277 NFSKRIAEVQLPQYQKVAFDNYLASADSPETAASIATTASIMFSRFMIPEVLSTFCGQST 336 Query: 366 IRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCD 425 + E + N ++ P+++ + + I + M R V FF D Sbjct: 337 M------PLEITGRTMVIFRLNPQIEFAVAPLLASIIYLMINRNIYMA--RKDPVHFFLD 388 Query: 426 ELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSP 485 E+ TL K+P L ++L AR GGC+ G Q LE YG K ++ T + Sbjct: 389 EVQTL-KVPSLSKVLQVARSAGGCFYLGTQGIDLLESTYGVKETENILTGCKTVFVGQLS 447 Query: 486 SHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTC 545 + AE+ + G ++ ++ S+G S G + LV + LP Sbjct: 448 HNGTAEYYSKYFGMEDISYKNKSRSHGKGGT--NRSEGDQQNTRPLVEIQQLLELPQGQF 505 Query: 546 YVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEP 605 Y G + + V P + RD++ ++ + + Sbjct: 506 YCRNRGIGNKKAVRIP-VHHQTVIPPWELRDMDK-----------GKQTWKKYRKLRIKQ 553 Query: 606 DVPEVVSGEDVTQAEQPQQPVSPAIND 632 + ++ +D+ E + + P + Sbjct: 554 SKIQPLTDQDLETRESVARSLVPDHAN 580 >UniRef50_C8WMX7 TRAG family protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMX7_EGGLE Length = 677 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 63/489 (12%), Positives = 155/489 (31%), Gaps = 81/489 (16%) Query: 168 KDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK 227 + +++++ +P ++ + G G+GK+ + Q +V D G+ +K Sbjct: 170 ERAELQMSKIPDPALERNKHVYVLGGSGSGKT--FNFVGPNLLQLNSSIVTTDPKGDTLK 227 Query: 228 SYYD-----PSIDKILN--PLDAR-CAAWDLWKECLTQPDFDNTANTLIPMGTK-----E 274 Y + K +N P ++ N L+ + + Sbjct: 228 QYGNFFLRHGYKLKAVNTKPDQINQSMHYNPLLYLQDSTSIMQIVNLLVENTSGNAEAEK 287 Query: 275 DPFWQGSGRTIFAEAAYLM----RNDPN-RSYSKLVDTLLSIKIEK-------LRTYLRN 322 + F+ + R ++ + + P +++ +++D L + L + Sbjct: 288 EDFFVKAERQLYMALMGYLFYFYADQPQYQTFPQMLDLLQLAGKDNPSQTKTPLDIIMLG 347 Query: 323 SPAANLVEEKIE-----------------------------------KTAISIRAVLTNY 347 + A + + E +T S+ A Sbjct: 348 TTAEDGFQGFEEWIVANHGGDEAAAQASEEYFVIKQYKGFKSTSESPETEASVIASCNVR 407 Query: 348 VKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR 407 + + E F+ + + +++ F +DT + +++M L Sbjct: 408 LAPFA----VSAVREFFSEDELELEMIGEERTA--FFLVMSDTDKTFNFILAMLLYQLFD 461 Query: 408 GLLAMGENRNR-----RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLED 462 A+ + + DEL + ++PDL + R +QS QL+ Sbjct: 462 VNTAIADRNPGSHCKIPINCILDELANIGRIPDLDVKIATLRSRWIYITAILQSVTQLKK 521 Query: 463 IYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVST 522 +Y + A + +T F + + + +G+ + S+G S Sbjct: 522 MY-KDNADIIEGNCDTTLFLGRCDLETNKKISERLGKFTATVRNRSESHGRQG---SWSE 577 Query: 523 GKDMERQTLVSYSDIQSLPD----LTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 ++ + L++ +D+ + P+ C V + +P + + P+ + N Sbjct: 578 SENKIGKELMAAADLGNNPEKFGGDDCIVFVKNAFPFLDKKYRTIDHPRYHELREVGEFN 637 Query: 579 PEMENRLSA 587 + N Sbjct: 638 LDDWNWDRK 646 >UniRef50_B3PCB8 TraG/TraD family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCB8_CELJU Length = 561 Score = 215 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 88/565 (15%), Positives = 165/565 (29%), Gaps = 80/565 (14%) Query: 145 EVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRR 204 T + + G G L ++ G G+GK +R Sbjct: 9 RFGSADWATWHEAYECGLFDNPGPVLGYMDGKLLMLDGDAP--MITIGGAGSGK---LRD 63 Query: 205 LANYAR----------QRGDMVVIYDRSGEFVK-----SYYDPSIDKILNPLDARC---A 246 L Y+ +++ D GE +NP Sbjct: 64 LLAYSLCGIQHENYGWLAPPRLLVNDPRGELAAISVHNQVRFGKAAYCINPFGLHGLPQH 123 Query: 247 AWDLWKECLTQ-----PDFDNTANTLIPMGTKED-PFWQGSGRTIFAEAAY-LMRNDPNR 299 + W D N LIP+ + +++ GR A Sbjct: 124 RLNPWDLIDPASPTFHADLTLLVNDLIPLSGSSNAEYFEIRGRQWCEALAQDYAVTFGTV 183 Query: 300 SYSKLVDTLLSIKIEKLRTYLRNSPAANLV-------------EEKIEKTAISIRAVLTN 346 + L D + +++ L + AA+ +K+ K +I L Sbjct: 184 TLLALYDMVNAVEDPDAWPVLYDRMAASPSMDVRRTATEIQNKRKKVPKEYSAIMGELFK 243 Query: 347 YVKAIRYLQGIEH-NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIA 405 Y+ + + +G F++ Q++ +++ A+ L P++ + A Sbjct: 244 YLGFLNDPTIRDTLSGSDFSL------EVLCQRDCNVYLMIPAEYIHQLAPMLRAIIGAA 297 Query: 406 IRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYG 465 + L RV F DE TL + L+ R G Q Q+ YG Sbjct: 298 M--LYKQRNPSAPRVLFLVDEAATLGRFESLLRGYTYGRGMGIRVWSIWQDIGQISRNYG 355 Query: 466 EKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASE---------------QYS 510 A + R FF A + +G + E + Sbjct: 356 RDALSGFIGSSQMRQFFGVRDLDTARMVSAMLGSQTLEYDQELDQMRAQVAQAQIISELF 415 Query: 511 YGADPVRDGVSTGKD--------MERQTLVSYSDIQSLPDLTCYVTLPGPY--PAVKLSL 560 G DP G++ + + L++ ++ ++P+ + + G P + Sbjct: 416 SGGDPFAAGMNYSYQAQAAIHRVKQARLLMTPDEVLNMPEDKQVIFISGKNLMPIHADKV 475 Query: 561 KYQTRPKVAPEFIPRDINPEMENRL---SAVLAAREAEGRQMASLFEPDVPEVVSGEDVT 617 +Y T P +A F+P +P +++ A R ++ + F Sbjct: 476 RYFTNPDMAGAFMPNPYHPPVDSVQVMTEAGAKRRPVITERVPAEFAHYPQYESGNWSFI 535 Query: 618 QAEQPQQPVSPAINDKKSDSGVNVP 642 + +P P K D V P Sbjct: 536 KGYRPANNKPPHKRRKWKDFIVPGP 560 >UniRef50_A7VRX1 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRX1_9CLOT Length = 589 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 89/542 (16%), Positives = 168/542 (30%), Gaps = 70/542 (12%) Query: 137 QGKQQSENEVTGGRQLTDNPKDVARMLK--KDGKDSDIRIG-----DLPIIR-DSEIQNF 188 + + ++ E+ LT D+ R K D KD+ I IG P+ R D + Sbjct: 44 KARFATQKEIAQAYPLTAFTPDLWRQGKNLPDSKDAGIVIGFERKKGTPMCRLDCSDSHT 103 Query: 189 CLHGTVGAGKSEV-IRRLANYARQRGDMVVIYDRSGEFVKSYYDPSID-KILNP--LDAR 244 T G GK+ + Y G V D G+ + Y + D P D R Sbjct: 104 LAISTTGGGKTTFFLYPNIEYTLACGCSFVCTDSKGDVFRDYAGIARDCYGFTPYVFDLR 163 Query: 245 ----CAAWDLW---------------------KECLTQPDFDNTANTLIPMGTKEDPFWQ 279 ++L E T+ + +T G ++ F+ Sbjct: 164 FPLCSDKYNLIHLVNKYIALYQESGKPEYLARAEKYTKITARSIVHTKGFDGGGQNAFFY 223 Query: 280 GSGRTIFAEAAYLMRN---DPNRSYSKLVDTLL-------SIKIEK------LRTYLRNS 323 S + A L+ R + +L + ++ +R Sbjct: 224 DSAEGLIASVILLVSEFCPKEERHIVSVFKIILELLEKDSDSENKETYFHKLMRQLPPEH 283 Query: 324 PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLF 383 A L + S+ +V++ + + E + + + + +F Sbjct: 284 KAKWLAGAALAAPDESMASVISTAISRLLSFIDSEIEQLI-CFDNGLDTEKLCTEKSAVF 342 Query: 384 ISSNADTHASLKPVISMWLSIAIRGLLA----MGENRNRRVWFFCDELPTLHKLPDLVEI 439 I + + ++ + + + G +RR++FF DE T+ PD + Sbjct: 343 IVFPEADKSK-QFLVPLIIKQLYDECIEFANHHGNKLDRRMYFFLDEYGTMPAFPDAEAM 401 Query: 440 LPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHK-IAEFAAGEIG 498 R V IQS +QLE+ YG A ++ + F AE + +G Sbjct: 402 FSAGRSRNILQVPIIQSLSQLEENYGRYGAETIKECCQNIIFGGLSPLSPAAEELSKSLG 461 Query: 499 EKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKL 558 + L S + R G + M + L++ +I++LP +P Sbjct: 462 NQTVLSGSVSTGSSSGSGRKGSNQSLQMIARPLMTPDEIRTLPMGEWIFLKTRNHPMHTT 521 Query: 559 SLKYQTR----------PKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVP 608 +Y P + I + + E + + +EP Sbjct: 522 LKRYSDWNIILNQPFNIPSHPLKPIRYASRETLIGSVHHRFITHNPEPFILETDYEPPAQ 581 Query: 609 EV 610 + Sbjct: 582 KK 583 >UniRef50_Q03BN9 Type IV secretory pathway, VirD4 component n=2 Tax=Lactobacillus casei RepID=Q03BN9_LACC3 Length = 819 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 95/599 (15%), Positives = 186/599 (31%), Gaps = 78/599 (13%) Query: 182 DSEIQNFCLHGTVGAGKSEVIR-RLANYARQRG--DMVVIYDRSGEFVKSYY-----DPS 233 D+ N G GK+ + + ++ + D V+I D GE ++S Sbjct: 176 DTSGTNTVAVAGPGGGKTTLFSLPVLDFIMRASVHDSVIITDVKGEMLRSTKAEFEARGY 235 Query: 234 IDKILNPLDAR-CAAWDLWKECLTQP---DFDN-------TANTLIPMGTKEDPFWQGSG 282 LN +D A++ + DFDN + ++ ++P W+ S Sbjct: 236 RVAALNLVDPTYSIAYNPLELVKQAYAAGDFDNAQMLCNTFSYSIFHNPNAKEPMWEQSS 295 Query: 283 RTIFAEAAYLM------RNDPNR----SYSKLVDTLLSIKIE----KLRTYLRNSPAANL 328 ++ + ++ P + + + ++ L + E KL + P+ + Sbjct: 296 ISLLNALILAVCKVCFDQHTPEKITMYTVTTMLSELGANPDENGMTKLDKFFSKLPSGDP 355 Query: 329 VEEKIEK-------TAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNG 380 + + T I +K + F I D K Sbjct: 356 AKLQYGTIQFSQGITRSGIFTGTMAGIKNYAFSNIGRLTATNDFNIADL----ATGDKPV 411 Query: 381 WLFISSNADTHASLKPVISMWLSIAIRGLLAMGE-----NRNRRVWFFCDELPTLHKLPD 435 FI D S +++ +LS L M RRV +EL L ++ Sbjct: 412 AFFIIY-PDYDNSNYSLVATFLSQVGYVLAKMATLAADSKLKRRVINLYEELGNLPRIEG 470 Query: 436 LVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAG 495 L L R G Y +QS AQLE YG++ AA + + + ++ AE+ + Sbjct: 471 LPHYLNVGRGRGLVYYLILQSIAQLEANYGKEGAAEIMGACGNKYDILADNYDDAEYFSK 530 Query: 496 EIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY-- 553 +IG+ + S P+ S G+ E + L+ ++ L + Sbjct: 531 QIGQTTVIAP----SRHGAPMDTDKSFGESQETRRLMMPDELLRLRKGEVVLIRSKQRSD 586 Query: 554 ---------PA---------VKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAE 595 P + S +Y TR F + + + ++ Sbjct: 587 LNNRSITAWPIHANPDEGTELPFSFEYLTRFNHQATFAELYGDKKPA---HNDIDLKKLL 643 Query: 596 GRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPE 655 + EP V + ++S S +EQ+ + P Sbjct: 644 LDITVTTIEPQNENDDPEITVKVNGHSLNAENDEPQVEQSASEPAATDENLEQKTEETPA 703 Query: 656 EEMEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGEDVEPG 714 ++ G ++ Q + Q+ ++ + + + +E G Sbjct: 704 AGSQKPTHDSKPNQGSNQQKQQFQEPQDPKKQITTEIDQQTTPLSALFSQSQLQMIEKG 762 >UniRef50_B5EWG0 Conjugal transfer protein n=2 Tax=Enterobacteriaceae RepID=B5EWG0_SALA4 Length = 673 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 88/638 (13%), Positives = 179/638 (28%), Gaps = 127/638 (19%) Query: 96 LHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDN 155 L + + +W ++L +A L +V I + + I+G + + + +TD Sbjct: 54 LMNAWPLWEYKKLHAAISLGTIV--FAAAIIVPLAAIIIGAFFEFPEPDVHGNAKLITDE 111 Query: 156 PKDVARMLKKDGKDSDIRIGDLPIIRD-------SEIQNFCLHGTVGAGKSEVIRRLANY 208 + +L D + +I IG + R + Q L +GK + Sbjct: 112 EIKESGLLDADEEYPEILIGKVAKGRHKGKYLKFAGQQFLGLGAPTRSGKGVGF--VIPN 169 Query: 209 ARQRGDMVVIYDRSGE---FVKSYYDP--SIDKILNPLDAR------------------- 244 D V + D E F Y + P R Sbjct: 170 LLNYRDSVCVLDIKAENYIFTAGYRKKMGQEVFVFAPDGYRFSEEEFEEFKFSDYYLNLS 229 Query: 245 ------------------CAAWDLWKEC-----LTQPDFDNTANTLIPMGTKEDPFWQGS 281 W+ + + A L P ++ W Sbjct: 230 PEEQQAFNEKFRNTEHVLSHRWNPLDYISRSKSRRVGEIKDLATILFPDDGGDNAIWNSM 289 Query: 282 GRTIFAEAAYLMR-------------NDPNRSYSKLVDTLLSI------------KIEKL 316 +F M + ++ + L+ + + Sbjct: 290 AEAVFESYILYMLDMEETINKINAEIEENRKNGTDDDRELMKPYPVSMAQLYSLTGVPDM 349 Query: 317 RTYLRNS----------------PAANLVEEKIEKTAISIRAVLTNYVKAIRYLQ-GIEH 359 ++ + N KT +I +K + Sbjct: 350 AEWMNDEILYWKDKGYPLSKGCVEGFNRFISVDPKTRGNIMQNFNKPLKIFEAESCRLAT 409 Query: 360 NGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIR----GLLAMGEN 415 + F D +K ++I + K +I+++ S +R L + Sbjct: 410 SASDFDFNDL------RRKRMSVYIVLSPTGMEKYKQLINLFFSQLVRVNTQTLPEHDKT 463 Query: 416 RNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLE--DIYGEKAAASLF 473 + DE ++ ++ + + + + Y+ Q+ QLE D YG+ A +L Sbjct: 464 LKYQCLLVLDEFTSMGRVGIIEKSIAFTAGYNIRYMIIYQNDEQLESDDAYGKSGAFTLR 523 Query: 474 DVMNTRAFFRSPSHK-IAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLV 532 + + AE + G+K + + + +G T + + L Sbjct: 524 KNLAVEVVYPPKDVDSTAERISKTFGKKTVKVKTNSRTSNGGKISNG--TNEQYVGRDLY 581 Query: 533 SYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVA--PEFIPRDINPEMENRLSAVLA 590 +I L G V + R KVA I + P + +++ Sbjct: 582 MPQEIVEL----------GSQKYVMQKINKGKRTKVAVNEVIIMEQVKPFVAHKIVYFDE 631 Query: 591 AREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSP 628 E R++A+ PDVP + E ++ + Sbjct: 632 PVFMERRKVATDNVPDVPILNDIEHYEIPRDKRRDIPS 669 >UniRef50_D0QMN9 TaxB n=15 Tax=Enterobacteriaceae RepID=D0QMN9_ECOLX Length = 613 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 85/574 (14%), Positives = 171/574 (29%), Gaps = 69/574 (12%) Query: 61 WWCTTLEGMRDLIKSQPVYEIQYYGKT---FRMNAAQVLHDKYMIWCSEQLWSAFVLAAV 117 W L + V GKT N +L + + + L A+ Sbjct: 13 WAFIGLVMCLVTYYTGSVAVYFLNGKTPLYIWKNFDSMLLWRII--TESNIRIDIRLTAI 70 Query: 118 VALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGK-DSDIRIG- 175 +L+ +++ +V + Q + + +DN +++LK + + D+DI +G Sbjct: 71 PSLLSGMVSSLIVPVFIIWQLNKTDVALYGDAKFASDNDLRKSKLLKWEKENDTDILVGA 130 Query: 176 -DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEF------VKS 228 + + L AGK I R ++ D E V+ Sbjct: 131 YKGKYLWYTAPDFVSLGAGTRAGKGAAIG--IPNLLVRKHSLIALDPKQELWKITSKVRE 188 Query: 229 YYDPSIDKILNPLDARCAAWDLWKECLTQP-----DFDNTANTLIPM--GTKEDPFWQGS 281 + +L+P +++ ++ + D L P T + + Sbjct: 189 ILLGNKVYLLDPFNSKTHQFNPLFYIDLKAESGAKDLLKLIEILFPSYGMTGAEAHFNNL 248 Query: 282 GRTIFAEAAYLMR--------------NDPNRSYSKLVDTLLSIKIEKL---RTYLRNSP 324 + A L+ P S +VD +I E + R L + Sbjct: 249 AGQYWTGLAKLLHFFINYEPSWLNEFGLKPVFSIGSVVDLYSNIDRELILSKREELEGTN 308 Query: 325 AA---------------NLVEEKIEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRD 368 E ++ SI + + +G F +R Sbjct: 309 GLDENALYHLRDALTKIREYHETEDEQRSSIDGSFRKKMSLFYLPTVRKCTDGNDFDLRQ 368 Query: 369 WMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGEN----RNRRVWFFC 424 R +++ NA+ + ++++ + + L + F Sbjct: 369 LRRED------ITVYVGVNAEDISLAYDFLNLFFNFVVEVTLRENPDFDPTLKHDCLMFL 422 Query: 425 DELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRS 484 DE P++ +P + + F + Q+ +QL +IYG + A +L R + Sbjct: 423 DEFPSIGYMPIIKKGSGYIAGFKLKLLTIYQNISQLNEIYGIEGAKTLMSAHPCRIIYAV 482 Query: 485 PSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLT 544 A + ++G S S G + R+ LV ++ +L Sbjct: 483 SEEDDAAKISEKLGYITTTSKSTSKSRGRS---TSQGESESEARRALVLPQELGTLDFKE 539 Query: 545 CYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDIN 578 ++ L G P Y P + Sbjct: 540 EFIILKGENPVKAEKALYYLDPYFMDRLMKVSPK 573 >UniRef50_Q82XL2 TRAG protein n=2 Tax=Nitrosomonas RepID=Q82XL2_NITEU Length = 545 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 78/513 (15%), Positives = 161/513 (31%), Gaps = 62/513 (12%) Query: 103 WCSEQLWSAFVLAAVVALVICLITFFVVSWILGR--QGKQQSENEVTGGRQLTDNPKDVA 160 W L + V A+ A++ + L R K+ + G + +D+ Sbjct: 30 WLHSDLLAVPVFLALGAVLTLIKGVLYSLLYLIRLFFRKRAMKPTDRSGSAAWASSRDIE 89 Query: 161 RMLKKDGKDSDIRIGDL----PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMV 216 +M + + + + P+ D E + G GK+ + + Sbjct: 90 KMGLYNRR--GGFLAGVHENRPVFVDIESSG-LVLSPAGGGKTVTF--VIPALCHNPISM 144 Query: 217 VIYDRSG-------EFVKSYY-------DPSIDK--------ILNPLDARCAAWD-LWKE 253 + D G E + Y +P NPL +W+ + Sbjct: 145 FVPDLKGTLACMTAELRRKRYKHEILCVNPGGLYQDILGAGARYNPLQILIDSWNNPDRH 204 Query: 254 CLTQPDFDNTANTLI--PMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSI 311 D + A L P+ E+ +++ R A + N + LLS Sbjct: 205 AQLLSDAQSIAKQLCQDPVQQGENQYFRNGSRKFLVFAFVYQVTNSNHATLADALCLLSD 264 Query: 312 KIEKLRTYLRNSPAANL--------------VEEKIEKTAISIRAVLTNYVKAIRYLQGI 357 K L+ +A+L + +K S R ++ + Sbjct: 265 KEALLKALQDAQYSAHLNGDLARSAKDLLAKFDSGDQKQIESFREGA---IQPLEIFSPS 321 Query: 358 EHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRN 417 E + D+ R +K +++ ++ A P + + A+ L+ ++ Sbjct: 322 GKLAECTSTCDF-RFADLKKKKMTVYLLADPTRMAVYAPWLGLLSWCALTELIRFQNGKS 380 Query: 418 RRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMN 477 V F CDE+ + K+ DL +L AR+F +Q Q +YG ++ +L Sbjct: 381 --VCFLCDEITNI-KINDLPSLLTLAREFKIKLWLIVQELEQWAHVYGRESLETLLSQTE 437 Query: 478 TRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 + S+K + + +GE + + D + + L++ ++ Sbjct: 438 VKIIMGVRSYKTCQLISDMLGESTIKALNHNLGRS---LFDAPTRSIQDAPRRLMTADEV 494 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 + D + + P + Y Sbjct: 495 RRTSD--TILFMGNHRPIHLSKIGYHEVKPWVK 525 >UniRef50_Q1QQL5 TRAG protein n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QQL5_NITHX Length = 575 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 70/496 (14%), Positives = 145/496 (29%), Gaps = 60/496 (12%) Query: 116 AVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIG 175 + L + + TF +VSW Q++E L M ++ G G Sbjct: 5 TIAYLGLGVSTFALVSW-----RSQKTETTFGSAEWLQPWVASRKGMFRRGGLVLGDWTG 59 Query: 176 DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKS----YYD 231 P+ + G+GK + + + + D GE + Sbjct: 60 LSPVY-YRGAGHALTVAPTGSGKGTS--AIVPNLLRHPF-IFLIDPGGENTAIAAKVWRK 115 Query: 232 PSIDK-ILN--------PLDARCAAWDLWKECLTQ-----PDFDNTANTLI---PMGTKE 274 LN P + + ++ D D A+ ++ + Sbjct: 116 KGYAFSCLNPWRMHTTAPWSLPSHSLNPLGILDSESETFASDADLLADMIVTRTGSESGS 175 Query: 275 DPFWQGSGRTIFAEAAYLMRND--PNRSYSKLVDTLLSIKIEKLRTYLR----NSPAANL 328 F++ ++ + R + ++ E + N A + Sbjct: 176 SAFFKDEAQSGIRAFLMHIVTTEPEERRTLTTLREYIAANAESWDALIASMKTNKAAGGI 235 Query: 329 VEEKIEKT-------AISIRAVLTNYVKAIRYLQG-IEHNGEPFTIRDWM----RGVRED 376 V + E+ AVL+ + +++ I + D R E Sbjct: 236 VAREAEQMERREANAGGEFSAVLSTMKQDTNFIEDPIMQAALSRSTVDLTVLKGRRGNEK 295 Query: 377 QKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDL 436 L + + + + + A+ + G RV F DE P L ++ + Sbjct: 296 LPGAVLSVIIPLEYLDTHAAYARLIVGCAL-WTMQRGPLARERVLFLMDEFPALKRMDRI 354 Query: 437 VEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGE 496 L RK+ IQ+ QL+++Y + + F + + A++ + Sbjct: 355 AGGLATLRKYRVWLWPVIQNIGQLKELY-RANWQTFLSNAGLKMFMGAGDLETAQYISEL 413 Query: 497 IGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAV 556 G+ ++ G S + + LV+ ++ V + P + Sbjct: 414 CGDATIEVTTKT--------PGGESVSPAV--RRLVTIEEVMHANGGQQIVFVDNLKPLL 463 Query: 557 KLSLKYQTRPKVAPEF 572 Y RP + F Sbjct: 464 LRKTPYWNRPSLRRAF 479 >UniRef50_Q8YK80 All8037 protein n=3 Tax=Nostoc RepID=Q8YK80_ANASP Length = 590 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 90/595 (15%), Positives = 190/595 (31%), Gaps = 75/595 (12%) Query: 97 HDKYMIWCSEQLWSAFVLAAVVALVICLIT-----------FFVVSWILGRQG------- 138 H+ + +S L +V++ ++ W GR+ Sbjct: 14 HNVIPQNFYDAFFSPMGLGLLVSVGALVLAKTMEGRGATNKLARARWAGGREKTAARKLA 73 Query: 139 -KQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAG 197 KQ +E P+ + + + ++I + + + G+ G+G Sbjct: 74 CKQITERRHNRVALYIGTPRGTKFQVVGNKRITNIPEDKNRLYLPDVQRGILVSGSGGSG 133 Query: 198 KS-EVIRRLANYARQRGDMVVIYDRS-----GEFVKS-----------YYDPSIDKILNP 240 K+ +I L A +G ++IYD E ++ IL+P Sbjct: 134 KTFSLINPLIRSAIDQGLPIIIYDYKYCHQESEKAEAKGQAPKLAGYAAERGYEVTILSP 193 Query: 241 LDARCAAWDLWKECLTQPDFDNTANTL---------IPMGTKEDP-FWQGSGRTIFAEAA 290 + + D + A L + G D F+ +G + Sbjct: 194 GFPESGVANPLDFLRSPTDAE-MARQLAIVLNRNFKLTSGDSSDSGFFANAGDQLAQAIF 252 Query: 291 YLMRNDPNRSYS------KLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTAISIRAVL 344 L R L + I+ L +++ + L +TA SI Sbjct: 253 MLARGTSFPDIMMCHQLLSLPRLIDRIQQADLNPWVKVAFDQFLSVAGSPETASSIVGTT 312 Query: 345 TNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSI 404 + + I + + +F + + + P++ L + Sbjct: 313 SGLFTRFMTPSTLSAFCGTTNI-----PLDLTGRKMVIF-GMDKEKRDVIAPLLVSILHL 366 Query: 405 AIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIY 464 + + + R + DELPTL+ LP LV+ L + R+ G + G Q+ +QLE Y Sbjct: 367 LVSRNV--AKKRTEPLVLALDELPTLY-LPALVDWLNQNREDGLVSILGFQNISQLEKAY 423 Query: 465 GEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGK 524 E+ A ++F T+AFF + + +G+++ + G S + Sbjct: 424 SEEVANAIFGGCATKAFFNPQDDVAGQRFSNFLGDEQIKHKERSRTSG-GKGGASTSLSE 482 Query: 525 DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENR 584 + L + SLP+ + PG ++ L + ++ + Sbjct: 483 QNSTRNLFEINQFNSLPEGRAIIVSPGFRGGREVGLPLLEQIQI------------PQAD 530 Query: 585 LSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAINDKKSDSGV 639 ++ + + + + SGE++ + + P + +K + Sbjct: 531 RNSEVESVKEWYKLQQKFITQSTLREPSGEELEIRRLEAERLLPLVEEKAEAEKI 585 >UniRef50_A4ZYV8 VirD4-like protein n=1 Tax=Bacillus subtilis RepID=A4ZYV8_BACSU Length = 796 Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 68/488 (13%), Positives = 151/488 (30%), Gaps = 65/488 (13%) Query: 181 RDSEIQNFCLHGTVGAGK--SEVIRRL-ANYARQRGDMVVIYDRSGEFVKSYY-----DP 232 D+ N + GT +GK + V + + +++ D GE + Sbjct: 193 IDTSPVNNLIIGTTRSGKGETSVFPSIDIFSRSESKPTMIVNDPKGELAAASKPTLEKRG 252 Query: 233 SIDKILNPLDAR-CAAWDLWKECLTQPD----------FDNTANTLIPMGTKEDPFWQGS 281 ILN +D +++ + + + + TL +D FWQ Sbjct: 253 YEVHILNLVDPNISMSYNPLQLVVDAYKRGDTESAVSLANTLSFTLYYDPNAKDKFWQNC 312 Query: 282 GRTIFAEAAYLM-------RNDPNRSYSKLVDTLLSI------------KIEKLRTYLRN 322 ++ + + + + + + L ++ +I L Y ++ Sbjct: 313 SMSLCNALVLAITDDCIKKKREDKITLYTVANFLSTMGSKNDFDEEKGIEINALDEYFQS 372 Query: 323 SPAANLVEEKIE-------KTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVRE 375 P + + T +I + ++ + + ++ + E Sbjct: 373 RPETDPARMQYSTSNFSTGNTRGNIFTNTMSELQIFLNPSIAKMTSKN---SLDLKKLAE 429 Query: 376 DQKNGWLFISSNADTHASLKPVISMWLSI-----AIRGLLAMGENRNRRVWFFCDELPTL 430 K LF+ D +SL + S++ A R V + DE + Sbjct: 430 GVKPAALFM-VTPDYDSSLHKIASIFTRQSYYIFAKEASFMPNGKLKRNVEYILDEFGNM 488 Query: 431 HKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIA 490 + D+ + + IQSY+Q++ +YG+ ++ + + + A Sbjct: 489 PAIEDMAGAITVCLGRNIRFNLYIQSYSQIKKLYGDDD-ETIIGNCGNQIYILTGDPSTA 547 Query: 491 EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTL- 549 E + IG KE YS + S + + ++L+ ++ S+ V Sbjct: 548 EKFSKLIGRKEVTD----YSRSGEQFSFKKSETESVRERSLMLPEELTSIKPNETVVFRI 603 Query: 550 -----PGPYPAVKLSLKYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFE 604 V + + + P +I D + N + V + + L Sbjct: 604 TKREDNNGRGIVSHPIFNTGKTAMNPRWIYLDKEFDTSNSIKDVEVNSLHKHVVLEELKY 663 Query: 605 PDVPEVVS 612 + E Sbjct: 664 DHIGENDK 671 >UniRef50_A5P8K4 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P8K4_9SPHN Length = 529 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 70/515 (13%), Positives = 134/515 (26%), Gaps = 71/515 (13%) Query: 175 GDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 G L I + + GAGK + + +I D GE + Sbjct: 61 GMLEPILHTSDGHLITLARTGAGKGVG--CIIPALLRYRGPAIIIDPKGENYQVTARRRR 118 Query: 235 -----DKILNPLD---ARCAAWDLWKECL-----TQPDFDNTANTLIPMGTKEDPFWQGS 281 ++L+P + A + D A L+ + DPFW Sbjct: 119 ELGQEVRLLDPFGVTGQQTDALNPLDLIDPHAHDAVDDAAQLAELLVAETSNRDPFWDSR 178 Query: 282 GRTIFAEAAYLMRNDPNRSYSKL--VDTLLSIKIEKLRTYLRNSPAANL---------VE 330 ++ + + L + LL+ + + L Sbjct: 179 AYSLVTTMLLFVASGRPPVLRNLEEMHYLLNQSATDMDFTFKEMAKNPLPAVRQGCAVKS 238 Query: 331 EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADT 390 K SI + ++ +R G+ L+I + Sbjct: 239 TAEAKVWASILSTAQSHTDFLRSAGARAALGQST----IDLNAITRGDPLTLYIVVPPEK 294 Query: 391 HASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 S ++ +W+ + + + F DE L +L L + + R +G Sbjct: 295 LESHGKLLRLWIGMLMSAITRRSRRPELPTLFVLDEAAQLGELKQLRQAITLLRGYGLRT 354 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 Q +QL+ +Y ++ + F + +A A G Sbjct: 355 WSFWQDLSQLKMLYPRD-WQTMVNNCEVLQSFGFANASVARSGAELTG------------ 401 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAP 570 R +Q L + L G P + Y P A Sbjct: 402 --FSNWRA------------------LQDLEYDEMVLALAGDRPVIARKPNYLKDPAFAG 441 Query: 571 EFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI 630 +F N + AA+EA+ + + + Q + P+ P Sbjct: 442 QFDE--------NAFYSDAAAKEADHYSFDPPRKRRSLAELKRIRAKEKRQSEVPLPPDH 493 Query: 631 NDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPG 665 + + + + E + E Sbjct: 494 DGRSASDVLREEFDLSGDEFSPPDDIEEPDWEDDK 528 >UniRef50_B8EPQ9 TRAG family protein n=1 Tax=Methylocella silvestris BL2 RepID=B8EPQ9_METSB Length = 580 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 64/491 (13%), Positives = 134/491 (27%), Gaps = 60/491 (12%) Query: 122 ICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIR 181 I F W + + + L M KDG G LP+ Sbjct: 9 IAAGVFGAAIWGWRTKERPTT---FGSADWLAPWVASKKGMFHKDGLLLGDWTGLLPVY- 64 Query: 182 DSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFV----KSYYDPSIDK- 236 + G+GK + Q + + D GE +++ + Sbjct: 65 YRGSGHILTVAPTGSGKGTS--AIVPNLLQHPW-IFLIDPGGENTAIASRAWSEKGYAFH 121 Query: 237 ILN--------PLDARCAAWDLWKECLTQP------DFDNTANTLIPMGTKED---PFWQ 279 LN P + + L D + A+ ++ E+ +++ Sbjct: 122 CLNPWGMLTAAPWSLPSHSINPLS-ILDPASETFSSDAELIADMIVTRTGNENGSSAYFK 180 Query: 280 GSGRTIFAEAAYLMRNDP--NRSYSKLVDTLLSIKIEKLRTYLRNSPAANLVEEKIEKTA 337 R+ + R + +S E L++ A I + A Sbjct: 181 EEARSGIRAFLMHIITTEPAERQTLLTLRKYISADSENWERLLKDMQANEAAGGIIAREA 240 Query: 338 ISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQ----------------KNGW 381 +++ T + + F M+ Sbjct: 241 VALERRETQATEEFSAILSTMKQDTNFIEDPVMQRALATSTVELSELKGFRNGTALNGCV 300 Query: 382 LFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILP 441 + + + + + + A+ + RV F DE P L ++ + L Sbjct: 301 VSVVMPLEYLETHAAYARLIVGCAL-WTMQKAPLSKGRVLFVMDEFPALKRMDRIAGGLA 359 Query: 442 EARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKE 501 RK+ IQ+ QL+ +YG+ + R F + + A++ + G+ Sbjct: 360 TLRKYRVWLWPVIQNLGQLKQLYGQN-WQTFISNAGLRQFIGAGDLETAQYISELCGDGT 418 Query: 502 HLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLK 561 + ++ L + ++ + V + P + + Sbjct: 419 IEVVTRSPGG----------ESISQTQRRLATVEEVMHIESKMQIVFVDNLKPILLRKTE 468 Query: 562 YQTRPKVAPEF 572 Y RP + F Sbjct: 469 YWQRPALRGHF 479 >UniRef50_D2Q3V4 Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q3V4_9ACTO Length = 641 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 78/510 (15%), Positives = 165/510 (32%), Gaps = 66/510 (12%) Query: 107 QLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKD 166 AV+ + ++ VV L + ++ S + V L N +D+ ++L++ Sbjct: 65 DYEWPPAATAVLIAELAIVVALVVGVFLLLRRRRGSRSRVDRHADLMSNRRDLRKILREG 124 Query: 167 GKDSDIRIG----------------DLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR 210 +++ R+G DL + E + + G GK+ R Sbjct: 125 AQETANRLGAGHAGPGVFIGRTVRDDLELFGSWEDMHIDIWGP-RTGKTTT--RAVPAIL 181 Query: 211 QRGDMVVIYDRSGEFVKSYY----DPSIDKILNP----LDARCAAWDLWKECLTQPDFDN 262 V+ + V + + +P + W+ ++ Sbjct: 182 DAPGAVIATSNKRDIVDATRGPRTAKGPVWVFDPQGVADEEPTWWWNPLTYVTSEVKAKQ 241 Query: 263 TANTLIP----MGTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRT 318 A+ ++ G + D ++ + A L R +++ L ++ Sbjct: 242 FADHIVNSQRREGARSDAYFDTVATDLLAG-LLLAAALAKRPITQVYLWLSDQLNDEPAR 300 Query: 319 YLRNSPAANLVEEKI-------EKTAISIRAVLTNYVKAIRYLQGIEH--------NGEP 363 L N+P L +++ +K + V+ + Q N Sbjct: 301 ILDNAPGYELAAQQMASLYSLPDKQRAGVFGSAQPNVQFLLNRQVARWVNPNGPSDNRPQ 360 Query: 364 FTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMG-----ENRNR 418 F+ +D++R + G L+ S T + P+++ + Sbjct: 361 FSPQDFIR------RGGTLYSLSKEGTG-TAGPLVAALTVAIVEAAEDYAKTCPMGRLPT 413 Query: 419 RVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNT 478 + DE + + DL ++ G + +QS+AQ + +GE L+ N Sbjct: 414 PLVGVLDEAANVCRWKDLPDLYSHFGSRGIVLMTILQSWAQGVECWGEHGIEKLWSSANI 473 Query: 479 RAF-FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDI 537 R + E + IGE + S Y G S ++R +++ SD+ Sbjct: 474 RVYGGGVSDANFLERLSKLIGEYDIRSNSVSYQKGE------RSHSSQIQRHSIMEVSDL 527 Query: 538 QSLPDLTCYVTLPGPYPAVKLSLKYQTRPK 567 S+P V G + ++ + RP Sbjct: 528 TSMPPGRAIVFASGTPATMIRTIPWMARPD 557 >UniRef50_A5TXL7 Possible conjugal transfer protein TraG n=3 Tax=Fusobacterium RepID=A5TXL7_FUSNP Length = 676 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 61/458 (13%), Positives = 140/458 (30%), Gaps = 73/458 (15%) Query: 178 PIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGE---FVKSYYDPSI 234 ++ D+ + + G GK + + + D GE + +Y Sbjct: 202 RLLIDNTPGHDMMVARSGGGKGVAV--VIPTLVTWKGSSLTNDIKGENWLYTAAYRKSLG 259 Query: 235 DKIL------NPLDARCAAWDLWKECLT-----QPDFDNTANTLIPMGTKEDPFWQGSGR 283 K+ + ++ ++ E D N A ++ +DPF+ S Sbjct: 260 HKVFRFEATADGVEKVSCHYNPMVEIRRGTVYEYQDAKNIALAIVSPDRTKDPFFAPSAG 319 Query: 284 TIFAEAA---YLMRNDPNRSYSKLVDTLLSIK-------------------IEKL----- 316 M + + + + + + S + E L Sbjct: 320 VYLTAVILHVLYMVKNRIANLADVYNFITSPQFTEDQKLQQMINSEHNSDGPEDLFYNIY 379 Query: 317 ---------RTYLRNSPAANLV----EEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG-E 362 R P+ + + ++ +K I ++A + Sbjct: 380 NDITILKTGEELPRTHPSVSKIGAEMADRADKERSGIIGCAKIDLEAFIVPTIARNTAYS 439 Query: 363 PFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENR------ 416 F I D M L+ + ++ ++ ++L+ + L E Sbjct: 440 DFRISDLMNSEV----PMDLYFVTAPNSVDITAVLLKLFLTQILYILTDSMELNKKGENI 495 Query: 417 --NRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFD 474 ++ DEL + K+ L + + R +G + IQ QL+++YGE S Sbjct: 496 AFKHKLLLLLDELTAIGKVDMLHKAISYIRGWGMKALIIIQDMKQLKEVYGEN--NSFLG 553 Query: 475 VMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSY 534 M+T ++ + A++ +G K ++ YS G V+ + + L+ Sbjct: 554 NMSTTLYYTTNDVDTAKYVQTRLGNKTEKIITKSYSQGL--FFRKVNYTESYVGRPLMRA 611 Query: 535 SDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPEF 572 ++ ++ + + G P ++ + Sbjct: 612 EEVHTMDEKEVIILSAGKNPIRGKQARWYEFNEFKNRL 649 >UniRef50_C7N9P1 TRAG family protein n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7N9P1_LEPBD Length = 676 Score = 208 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 89/631 (14%), Positives = 189/631 (29%), Gaps = 111/631 (17%) Query: 27 NIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYW-WCTTLEGMRDLIKSQPVYEIQYYG 85 + + + GL++ + Y + ++ +I + + + Sbjct: 15 KWIFSIIMFILVNITGLMVISTNYMEELEKVNNYATFAKIRRLIKPVIIGKKNQYMYFPS 74 Query: 86 KTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENE 145 + M + + +L S F L + +L++ + + + ++ K E E Sbjct: 75 GNWEMIMKK----------TPRLTSQFQLG-ICSLLVGSLIILTMPYWKKKKLKSHGEAE 123 Query: 146 VTGGRQLTDNPKDVARMLKKDGKDSDIRIG-------DLPIIRDSEIQNFCLHGTVGAGK 198 L N K + + G ++ IG L ++ D+ + + L GK Sbjct: 124 FGTYDDLKKNKKKPSDVDFLSGNENGFVIGYVKTLSGKLKLLYDTSMIHIALFLPTRGGK 183 Query: 199 SE--VIRRLANYARQRGDMVVIYDRSGEFVK--SYYD----PSIDKILNPLDARCAAWDL 250 +I L ++R I D E + S+Y P+ +++ Sbjct: 184 GVGYIIPSLVAGLKKR--STFISDIKKENYELTSWYRAKILKHRILKFEPMSELSNSYNF 241 Query: 251 WKECL-----TQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMR---------ND 296 E D ++ +DPFW S + + + D Sbjct: 242 LSEVRYGTNYEIEDCRIIGTMIVGEDESKDPFWGDSAKDTISTLTGYVHYREVSNRPEED 301 Query: 297 PNRS-----YSKLVDTLLSIK----------------------------------IEKLR 317 P+ + + ++ + + + +E+LR Sbjct: 302 PDITDVRVSLNDVISIITNTENSLYRMFAKYLGKPMEEDEYEDEMSKDFILKKKTVERLR 361 Query: 318 TYLRNSPA----------------ANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNG 361 + + L++ E T SI + ++ +++ G Sbjct: 362 KIYTDDESIKALNKGLHPFVAKQFGYLLQNTGENTFKSITSTAKTKLQVFEIPSVVKNIG 421 Query: 362 -EPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV 420 F D + K L+ L P++ + L+ +N + Sbjct: 422 KSDFRALDLV----NSDKPVDLYFVIKPKDIDLLAPLVRIMYIQLTNLLMESLSKKNFNI 477 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 F DEL ++ LV+ L FG V Q QL Y ++ + + + Sbjct: 478 IFLMDELNAYGRMKPLVKGLGYYAGFGIKMVGIFQGLDQLNSTYDKQG-KEVLNGCQIQV 536 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 F R ++ + +G++ S + + L+S S+I+ L Sbjct: 537 FGRPNDEAAPDYISKTLGKETIRVKSRNIGLKGGG-------NVSEQGKDLLSPSEIRLL 589 Query: 541 PDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 PD V P + L Y P++ Sbjct: 590 PDRKAVVITGYKKPLLLDKLYYYEYPELLKR 620 >UniRef50_Q7M994 CONJUGAL TRANSFER PROTEIN (TRAG) n=1 Tax=Wolinella succinogenes RepID=Q7M994_WOLSU Length = 603 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 85/609 (13%), Positives = 186/609 (30%), Gaps = 79/609 (12%) Query: 28 IMLYCLFIFFWILVGLVLW------IKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEI 81 I+++ + + I+ + + +++ + + L G I + Sbjct: 12 IVIFGMSLLLLIVSSIRAFVSSKNRFELATKDILKALFKRLSFVLLGAILAIPLFAISLS 71 Query: 82 QYYGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQ 141 Y+ ++ K + S + + L + L K Sbjct: 72 IYFEIPLLDTPIKI--QKLIESIDSTNISKLRNEFWLCVAWALTPLSLALLYLFTPAKST 129 Query: 142 SENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEV 201 + GR D+ +M + + I+ + + G GK+ Sbjct: 130 A-----YGRARWAEKSDIQKMGLNCERGFILARAWGKKIKYDTPLSTLVIAPPGTGKTSA 184 Query: 202 IRRLANYARQRGDMVVIYDRSGE---FVKSYYDP---SIDKILNPLDARCA-AWDLWK-- 252 I + + V+ D GE Y + I NP ++ + Sbjct: 185 I--IIPNLLSIPNSQVVIDVKGEICSLTAGYRQKKLLNQVFIFNPFGEDSNFHFNPFNLE 242 Query: 253 ------ECLTQPDFDNTANTLIP-MGTKEDPFWQGSGRTIFA-EAAYLMRNDPNRSYSKL 304 +T+ P ++D W+ + +T F A + + + ++ Sbjct: 243 RMSKLGFAEKTAIVRQVGSTIFPKPKDEKDSHWRETAKTFFEFAAMHNIEKYGYTTLYEI 302 Query: 305 VDTLLSIKIEKL-RTYLRNSPA-------------------------------ANLVEEK 332 ++L Y A Sbjct: 303 YRFPKKDWTDELEDKYFDEKEKREELGEEVNTFRLLLRQIAENETLHDNIRDDARRFLGT 362 Query: 333 IEKTAISIRAVLTNYVKAIRYLQGIE-HNGEPFTIRDWMRGVREDQKNGWLFISSNADTH 391 S+ + + + L+ E + F R + N L+I Sbjct: 363 PANEFGSVLSTFSTKMSIFGDLRVKELTDQNSF------MPERLREDNITLYIKCLEKDI 416 Query: 392 ASLKPVISMWLSIAIRGLLAM-GENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY 450 SL P+I + L ++ L++ + R++ DE+ +L ++E+ +R + Sbjct: 417 PSLSPIIRILLETIVKELMSRESTDPKERIYLELDEVMRFGELDFMIELPSISRSYNLPN 476 Query: 451 VFGIQSYAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS 510 +F QSYAQ+ Y ++ + D + + FR+ + AE + E+G+ K + Sbjct: 477 IFAAQSYAQIRKHYSQEDLEIMLDTVAYQVVFRANRQQAAEDISKEVGDFTAHKKTTS-- 534 Query: 511 YGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPY--PAVKLSLKYQ-TRPK 567 + ++ S E + LV+ DI ++P + G P + + Y R + Sbjct: 535 --SQDIKILQSYSTSEEAKRLVTAQDILNIPKDKVLILATGHKATPILAQANFYFKDRTE 592 Query: 568 VAPEFIPRD 576 I ++ Sbjct: 593 RQKTKIKKE 601 >UniRef50_C5RQH6 TRAG family protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQH6_CLOCL Length = 710 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 65/436 (14%), Positives = 138/436 (31%), Gaps = 58/436 (13%) Query: 162 MLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEV-IRRLANYARQRGDMVVIYD 220 + K+ GK+ IG E + G GK+ + + G+ ++ D Sbjct: 201 LNKEKGKEKIYFIG--------EDVHSLCIGATRCGKTRTEVLQSVGVMALAGESMIFSD 252 Query: 221 RSGEFVKSYY----DPSIDKIL----NPLDARCAAWDLWKECLTQPDFDNTANTL----- 267 E + + + I NPL + ++ + + D D+ A + Sbjct: 253 PKAELYQYTHIFLERLGYEVIAIDFKNPL--KSNRYNFLQPIIEAVDRDDIAAAVDATWD 310 Query: 268 ----IPMGTKEDPFWQGSGRTIFAEAAYLMRNDPN-------RSYSKLVDTLLSI----- 311 + K + W +I A + + D ++ + + + + Sbjct: 311 LTSQLVGEPKGERIWTDGNASIIASSIMSVVYDNRHGANKKYQNMTNVYFFISEMCKTIG 370 Query: 312 ----KIEKLRTYLRNSPAANLVE---EKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPF 364 IE + PA L+ KT S ++ Sbjct: 371 KTMPIIEYNKRLSPTHPAKGLLAISEVAPSKTRGSFYTAALTTLRLFTNPLI----NSMT 426 Query: 365 TIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLL----AMGENRNRRV 420 D+ +K I D + + P+ S+ ++ L+ A G RV Sbjct: 427 NASDYDPKETGSKKRALFIIL--PDENTTYYPLASLLVAQHYSELVKSADARGGRLKNRV 484 Query: 421 WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAASLFDVMNTRA 480 F +E ++PD L G + +Q ++QL++ YG+ A ++ Sbjct: 485 NFLLEEFGNFTQIPDFSSKLTVGGGRGIRFNLILQGFSQLDEKYGKDVAKTIKGNCENWV 544 Query: 481 FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL 540 + +S + E + ++G S S+G S ++ + L++ +I+ + Sbjct: 545 YLQSDDSETLEELSKKLGNYTVSTYSLSASHGKF-TNPSSSHSINLTGRALLTTDEIRLI 603 Query: 541 PDLTCYVTLPGPYPAV 556 +T + Sbjct: 604 KRPYSLITSRNNPGMM 619 >UniRef50_B9NX87 TraG/TraD family protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NX87_9RHOB Length = 738 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 92/713 (12%), Positives = 207/713 (29%), Gaps = 69/713 (9%) Query: 26 ANIMLYCLFIFFWILVGLVLWIKISWQTFVNGCIYWWCTTLEGMRDLIK--SQPVYEIQY 83 L F+ +L+G + + ++ +C + + I Sbjct: 37 NTWFLLWSFLGPVLLLGSMAAMAYDTLSWRQVRFGAFCIGAGWLLGIAPPSDNSPQAIGL 96 Query: 84 YGKTFRMNAAQVLHDKYMIWCSEQLWSAFVLAAVVALVICLITFF---------VVSWIL 134 K + ++L + ++ E L A + + F ++ Sbjct: 97 LWKPLWNSILRLLTNPGTLYPVELLLLTLTTIAFLGMCWGFGGMFRKSTTRKDPFLTRGT 156 Query: 135 GRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGD------------------ 176 + G + ++ T N ++ G+ + + IG Sbjct: 157 SKGGAKIQRARWATPKEATQNLNAPGGIVL--GEMTPVEIGGFNAFKPDDPSTWGKQGKG 214 Query: 177 --LPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSI 234 L + G K+ + + A D + D D Sbjct: 215 QLLTKSPTDGNGQILVFSEPGGYKTSGL--VVPTALTYQDALFANDPKLTLYAQTADARR 272 Query: 235 DKILNPLDAR-CAAWDLWKECLTQPD-----FDNTANTLIPMGTKEDP---FWQGSGRTI 285 NP+ D ++ D F A TLIP G +W+ + Sbjct: 273 QMGFNPMKISATDGLDPFRMLAPLLDGHPSVFYALAKTLIPQGPGATENSIYWREKSVNL 332 Query: 286 FAEAAYLMRNDPNRSY-SKLVDTLLSIKIEKL---RTYLRNSPAANL---VEEKIEKTAI 338 + +++ ++ L K E L ++ + + ++ ++ Sbjct: 333 LTALIHYFLEQNSQNISLEIAHFLSQPKREVLKGADQIAASTHESYVQIPMDALHSESDE 392 Query: 339 SIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVI 398 +++ + + Q + G + + +F++ T + P++ Sbjct: 393 GYPGLISGVLNKFSFSQFSDVRGFLLEPPESTKHRLALDPKTDIFLNMPTATMNNFSPMV 452 Query: 399 SMWLSIAIRG--LLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQS 456 + L+ + L E R F DE + L + E R G + Q+ Sbjct: 453 RLLLASFLTAAQLTEQPERPRVRRLFILDEAKGFGNMDLLETVRDEGRAIGLHLMMIYQT 512 Query: 457 YAQLEDIYGEKAAASLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQYS-----Y 511 + Q+E I+G +A + D ++ R A A +G+ +E S Y Sbjct: 513 WGQMEKIWGRGSAKAWEDTVDARIMGAISDPDRARSVAAMLGKDTIAIKTETSSTSSSKY 572 Query: 512 GADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQTRPKVAPE 571 G + ++ +L+S S++ +P + P + Y TR Sbjct: 573 QMFTGTVGEGAHEQLKEISLLSESELAKIPRHGALILTRDLPPILASKAIYFTR------ 626 Query: 572 FIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAIN 631 D+ ++++ E + + + PE + + P N Sbjct: 627 ---ADMKDKVKSFSEIAPELEEDRQKVKDAAKTSEPPESECTPNSGIHDSRDAGNVPDNN 683 Query: 632 DKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQE 684 + + + ++ + K E L E + +A + Q+ Sbjct: 684 NHRHEQRTRNRQEEMQSSTQSKSTERETFDLFDK--SEYETREASAQKEPSQK 734 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.120 0.281 Lambda K H 0.267 0.0369 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,058,832,582 Number of Sequences: 3077464 Number of extensions: 112927802 Number of successful extensions: 636447 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2227 Number of HSP's successfully gapped in prelim test: 2887 Number of HSP's that attempted gapping in prelim test: 620642 Number of HSP's gapped (non-prelim): 12782 length of query: 717 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 581 effective length of database: 621,861,252 effective search space: 361301387412 effective search space used: 361301387412 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 96 (41.7 bits)