12/01/2012 03:55:29 : INFO  : Run start: Thu Jan 12 03:55:27 GMT 2012
12/01/2012 03:55:36 : INFO  : Initialised job
12/01/2012 03:55:38 : INFO  : Renaming log file 'phyre2_20120112_035527.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/2623b8ff81c809c3/phyre_20120112_035527.log'
12/01/2012 03:55:40 : INFO  : Initialised job:
Sequence
>batch____
MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPRVTLWQGLADQSNLNGV
DAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGD
LGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPP
FRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPVRNEQFAHALGHA
LHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEEALADVVR

12/01/2012 03:55:41 : INFO  : Checked sequence
12/01/2012 03:55:46 : INFO  : Finding homologues with PSI-BLAST
12/01/2012 03:55:47 : INFO  : PSI-BLAST 3 iterations
12/01/2012 03:57:52 : INFO  : PSI-BLAST 5 iterations
12/01/2012 04:01:20 : INFO  : Finished PSI-BLAST
12/01/2012 04:01:23 : INFO  : Running Buildali to generate a3m file
12/01/2012 05:35:34 : INFO  : Converting to HMM
12/01/2012 05:35:49 : INFO  : Calibrating HMM
12/01/2012 05:36:07 : INFO  : Searching HMM database
12/01/2012 05:41:22 : INFO  : Finished buildali
12/01/2012 05:41:26 : INFO  : Predicting secondary structure
12/01/2012 05:41:37 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 05:41:40 : INFO  : Predicting Disordered regions
12/01/2012 05:41:46 : INFO  : Predicted Disorder (Disopred)
12/01/2012 05:41:49 : INFO  : Running memsat_svm check
12/01/2012 05:47:43 : INFO  : Running memsat_svm full
12/01/2012 05:55:27 : INFO  : Predicted Transmembrane (memsat_svm) ID '2623b8ff81c809c3'
12/01/2012 05:55:29 : INFO  : Initialising fold library search
12/01/2012 05:55:34 : INFO  : Initialised search input
12/01/2012 05:55:37 : INFO  : Building Ensemble models
12/01/2012 05:55:41 : INFO  : Building hh.c3oh8A_.model.1.pdb
12/01/2012 05:56:05 : INFO  : Building c1z45A_.1.pdb
12/01/2012 05:56:26 : INFO  : Building c1z7eC_.2.pdb
12/01/2012 05:56:46 : INFO  : Building c3oh8A_.3.pdb
12/01/2012 05:57:07 : INFO  : Building d1i24a_.4.pdb
12/01/2012 05:57:26 : INFO  : Building d2b69a1.5.pdb
12/01/2012 05:57:45 : INFO  : Building c2b69A_.6.pdb
12/01/2012 05:58:04 : INFO  : Building c3m2pD_.7.pdb
12/01/2012 05:58:24 : INFO  : Building d1oc2a_.8.pdb
12/01/2012 05:58:43 : INFO  : Building c3iusB_.9.pdb
12/01/2012 05:59:02 : INFO  : Building c2p5uC_.10.pdb
12/01/2012 05:59:21 : INFO  : Building c2pk3B_.11.pdb
12/01/2012 05:59:40 : INFO  : Building c2z1mC_.12.pdb
12/01/2012 05:59:58 : INFO  : Building d1r6da_.13.pdb
12/01/2012 06:00:17 : INFO  : Building d1vl0a_.14.pdb
12/01/2012 06:00:37 : INFO  : Building c2hrzA_.15.pdb
12/01/2012 06:00:58 : INFO  : Building c2c20D_.16.pdb
12/01/2012 06:01:17 : INFO  : Building c1n7gB_.17.pdb
12/01/2012 06:01:36 : INFO  : Building c3sc6F_.18.pdb
12/01/2012 06:01:57 : INFO  : Building c3icpA_.19.pdb
12/01/2012 06:02:17 : INFO  : Building d2c5aa1.20.pdb
12/01/2012 06:03:03 : INFO  : Finished HH model building
12/01/2012 06:03:05 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 06:04:06 : INFO  : html domain output complete ID '2623b8ff81c809c3'
12/01/2012 07:31:44 : INFO  : Run end  : Thu Jan 12 07:31:43 GMT 2012
