235 c3liaA_ Probab=85.73   E-value=1.8  Score=19.80  Aligned_columns=227  Identities=10%

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCC
Q ss_conf             99999999999999999999999999998775365421023103567888999984034200134321555301210034
Q batch____        49 KSYQIVDITHAIQKRVDNWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNSTLEMTQRM  128 (890)
Q Consensus        49 ~~~~l~~ia~~i~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  128 (890)
                      +.....+++.+++.+++.++.........+...  ...............+...................+.........
T Consensus         3 a~~~~~~~a~~~a~~i~~~l~~~~~~~~~la~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (262)
T c3liaA_           3 AYEKSIEMAGNYANQFDAQMEANQAIARTLACT--MAEYGSQDREEAMSIIKRILNENPQLIGVYLGYEPDAFDGRDKNY   80 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCSCCHHHHHHHHHHHHHHCTTCSEEEEEECTTTTTSCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE
T ss_conf             379999999999999999999999999999998--751247898999999999998480301223421478625765303


Q ss_pred             CCCCHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCHHHHCCCCC
Q ss_conf             44201332032101246642024662034310234530000123212222344453102210100223321011002445
Q batch____       129 STYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQ  208 (890)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  208 (890)
                      ...........                       ........................|+..........+...+..  .
T Consensus        81 ~~~~~~d~~g~-----------------------~~~~~~~~~~~~~~~~~~d~~~~~wy~~~~~~~~~~~~~~~~~--~  135 (262)
T c3liaA_          81 INAPGHDSTGR-----------------------FVPYCNKINGPVIIEPLVHYDSSDYYQLPKTTGKDTLTEPYFY--E  135 (262)
T ss_dssp             TTCTTCCTTCC-----------------------CCEEEECTTSSCEEEECCCTTTCHHHHHHHHHCSCEECCCEEE--T
T ss_pred             EEEEEECCCCE-----------------------EEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECC--C
T ss_conf             44331078854-----------------------9998753788501346788544668887850688388531025--8


Q ss_pred             CCEEEEEEEEECCCCCEEEEEEECCCHHHH------HCCCCCCHHHHHCCCCHHHHHCCC--------------------
Q ss_conf             402588886313777253678720331444------012111002320121024542022--------------------
Q batch____       209 NGHYFTLRTTFNQPGHLATVVAFDLPINDL------IPPGMPLDSFRLEPDATATGNNDN--------------------  262 (890)
Q Consensus       209 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~l------~~~~~~~~~~~l~~~~~~l~~~~~--------------------  262 (890)
                      ..............+...+++..+.....+      ......+..+.+..++..+.....                    
T Consensus       136 ~~~~i~~~~pi~~~~~~~gvi~~~~~~~~~~~~~~~~~~~~~g~~~iid~~G~ii~~~~~~~~~~~~~~~~~~~~~~~~~  215 (262)
T c3liaA_         136 GIFMVSYDSPIFKNGEFAGIAGVDVPLEYVDDVASSIRTFDTGYAFMVSNTGIFLSHPTQKNWIGEKSLSDFDVEEIKNA  215 (262)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEEEEECHHHHHHHTTCCBTTTBEEEEECTTCBBSCCSSCGGGTTTCBGGGSSCHHHHHH
T ss_pred             CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEECCCEEEEEECCCCEEEECCCHHHHHCCCCCCCCCCCCHHHH
T ss_conf             80799999652047650357752023332222222210159727999906981998278144102323444443337999


Q ss_pred             -------CCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEHHHHH
Q ss_conf             -------3345432212345417999986078882799763312544
Q batch____       263 -------EKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGTLL  302 (890)
Q Consensus       263 -------~~~~~~~~~~~~~~~~l~~~~~i~~~~w~lv~~~~~~~l~  302 (890)
                             ............+...+..+.+++.++|.++..+|..++.
T Consensus       216 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~i~~~~W~iv~~vp~~eiL  262 (262)
T c3liaA_         216 ASDIREGIGGHVEIKDPITGKTVIMFYEPVKTGDFSFVLVVPKEEML  262 (262)
T ss_dssp             HHHHHTTCCEEEEEEETTTTEEEEEEEEEETGGGEEEEEEEEHHHHC
T ss_pred             HHHHHCCCCCEEEEEEEECCEEEEEEEEEECCCCEEEEEEECHHHHC
T ss_conf             99997079946999982189099999999578980999994268509