55 c3clkB_ Probab=100.00  E-value=1.4e-31  Score=184.60  Aligned_columns=256  Identities=14%

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             97889997899999999999997499689997289998999999999863123322111355555744788864236753
Q batch____        31 TIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPV  110 (332)
Q Consensus        31 i~~~~~~~f~~~~~~gi~~~a~~~~~~~i~~~~~~~d~~~~~~~i~~~i~~~vd~ii~~~~~~~~~~~~~~~~~~~~~~~  110 (332)
                      ++|+++||||..+.+|++++++++ ||.+++.+.     .+.+.++.++++++||+++.+  ...............+++
T Consensus         1 iipdl~~~f~~~i~~gi~~~a~~~-g~~l~i~~~-----~~~~~i~~l~~~~vdgiIi~~--~~~~~~~~~~~~~~~~~v   72 (262)
T c3clkB_           1 VIAAVVSNFAQQILDGIQEEAHKN-GYNLIIVYE-----EQKHALLTAIERPVXGILLLS--IALTDDNLQLLQSSDVPY   72 (262)
T ss_dssp             CEEEEECCHHHHHHHHHHHHHTTT-TCCEEEECC-----HHHHHHHHHHHSCCSEEEEES--CCCCHHHHHHHHHTTCCE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEC-----CHHHHHHHHHHCCCCEEEECC--CCCCCHHHHHHHHCCCEE
T ss_conf             988778845999999999999987-988999974-----469999999856997999818--865303589998549829


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             11234433212235677427875858999999999998631034314667775228997378762457999999999998
Q batch____       111 VFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELN  190 (332)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~i~~i~g~~~~~~~~~R~~G~~~~l~  190 (332)
                      +........       ..++|+.|++.+++.++++|.+.+++            ++.++.++......++|.+||+++++
T Consensus        73 ~~~~~~~~~-------~~~~V~~d~~~~~~~~~~~l~~~g~~------------~i~~i~~~~~~~~~~~r~~g~~~~~~  133 (262)
T c3clkB_          73 CFLSXGFDD-------DRPFISSDDEDIGYQATNLLINEGHR------------QIGIAGIDQYPYTGRKRLAGYKKALK  133 (262)
T ss_dssp             EEESCCCSS-------SCCEEECCHHHHHHHHHHHHHTTTCC------------SEEEESCCCSSHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCC-------CCCEEEECCHHHHHHHHHHHHHHCCC------------EEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             996246777-------65578875167888999999960698------------39997587886768999999999998


Q ss_pred             HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHC---CCCCEEEEEECCHHHHHH
Q ss_conf             70898631330136778778899999998611246530032103556599999987738---997269997088899999
Q batch____       191 DKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHN---KSSIPVFGVDALPEALAL  267 (332)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~~~v~g~d~~~~~~~~  267 (332)
                      +++............+..+........+...   ..++++++.++.++.+++.++++.+   +.++.++|+|+.+.....
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~aii~~~d~~a~~~~~~l~~~g~~~p~di~i~~~~~~~~~~~~  210 (262)
T c3clkB_         134 EANIAINQEWIKPGDYSYTSGEQAXKAFGKN---TDLTGIIAASDXTAIGILNQASSFGIEVPKDLSIVSIDGTEXCKIT  210 (262)
T ss_dssp             HTTCCCCGGGEECCCSSHHHHHHHHHHHCTT---CCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEEECCGGGGSS
T ss_pred             HCCCCCCCEEEECCCCCHHHHHHHHHHHHCC---CCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHC
T ss_conf             7398667227853898889999999998506---8996999941710116899999818988737999823880356424


Q ss_pred             HHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEEECCCCH
Q ss_conf             51589629984299999999999999998599988655567788679905478424038
Q batch____       268 VKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNL  326 (332)
Q Consensus       268 i~~g~~~~tv~q~~~~~G~~a~~~~~~~i~G~~~~~~~~~~~~~~~i~ip~~lItk~Nv  326 (332)
                      ...   ++||.|++++||+.|+++++++++|++.+.       ...+.+|+.||.|+++
T Consensus       211 ~p~---ltti~~~~~~~g~~A~~~L~~~i~~~~~~~-------~~~~~i~~~lv~R~St  259 (262)
T c3clkB_         211 RPQ---LTSISQDFFQXGVTGVQQIHQSVKNGSNRI-------VSQQFIPVNPVIRKST  259 (262)
T ss_dssp             SSC---CEEEECCHHHHHHHHHHHHHHHHHTSCCCC-------CCEEECCCEEECCSSC
T ss_pred             CCC---EEEEECCHHHHHHHHHHHHHHHHHCCCCCC-------CEEEEECCEEEECCCC
T ss_conf             886---028861989999999999999994899888-------7489982289975733