Phyre 2 alignment of P77013 with d1c6ya_

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Job Description | P77013
Confidence | 0.92% | Date | Thu Jan 5 12:25:25 GMT 2012
Rank | 51 | Aligned Residues | 20
% Identity | 15% | Template | d1c6ya_
SCOP info | Acid proteases | Acid proteases | Retroviral protease (retropepsin)
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | L | A | T | L | L | W | L | H | V | L | A | Q | K | N | M | T | I | T | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | P | T | N | I | I | G | R | N | L | L | T | Q | I | G | C | T | L | N | F
Template Known Secondary structure |  |  | S | S |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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