40 c2cyaA_ Probab=93.55   E-value=0.65  Score=26.24  Aligned_columns=230  Identities=17%

Q ss_pred             ECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH---HHCCEEEEEE-----EECCCCCCCHHHHHHCCCCH
Q ss_conf             658999999999999649809997478620179999999999---8689399998-----52700168823656569998
Q batch____         4 IETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAK---ARADVVVVSI-----FVNPMQFDRPEDLARYPRTL   75 (283)
Q Consensus         4 i~t~~elr~~~~~~r~~g~~IglVPTMGaLH~GHlsLi~~A~---~~~d~vVVSI-----FVNP~QF~~~eD~~~YPr~l   75 (283)
                      +-+..++++.+..-+.-.--.|+=|| |-||=||+--+-..+   +.+-.+++.|     +++.--..+.+-...|-+.+
T Consensus        17 ~~~~e~l~~~l~~~~~~~iy~G~~PT-g~lHlG~~i~~~~~~~~~~~g~~~~~lIaD~~a~~~d~~~~~~~~~~~~~~~~   95 (328)
T c2cyaA_          17 IVTEEELKGLLASGARIKGYIGYEPS-GVAHIGWLVWMYKVKDLVEAGVDFSVLEATWHAYINDKLGGDMDLIRAAARIV   95 (328)
T ss_dssp             EETHHHHHHHHHHCSCCEEEEEECCC-SSCBTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTTGGGGCHHHHHHHHHHH
T ss_pred             HCCHHHHHHHHHCCCCCEEEEEECCC-CCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             16989999998549982899800568-83407789999999999977993899971835652688899989976329999


Q ss_pred             HHHHHHHHHCCCCEEEE-----CCHHHHCCCCCCCEEEEECHHHHCCCCCCC--CCCHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             99999999669989992-----786781988878628996424400236888--87556779999999972248887686
Q batch____        76 QEDCEKLNKRKVDLVFA-----PSVKEIYPNGTETHTYVDVPGLSTMLEGAS--RPGHFRGVSTIVSKLFNLVQPDIACF  148 (283)
Q Consensus        76 ~~D~~ll~~~gvD~vF~-----P~~~emYP~g~~~~~~v~~~~l~~~leG~~--RPghF~GV~TVV~KLfniv~P~~a~f  148 (283)
                      .+++.-+.----.+.|.     +...++|+.-...........+.....-..  --|.|---+--.+-.+.+ ++|...-
T Consensus        96 ~~~~~a~g~~~~k~~~~~~S~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~YP~lQaaDil~~-~~~i~~~  174 (328)
T c2cyaA_          96 RRVMEAAGVPVERVRFVDAEELASDKDYWGLVIRVAKRASLARVRRALAEEAEVDASKLIYPLMQVSDIFYM-DLDIALG  174 (328)
T ss_dssp             HHHHHHTTCCGGGCEEEEHHHHHTCHHHHHHHHHHHHTSCHHHHHTTCCCGGGSCTHHHHHHHHHHHHHHHT-TCSEEEE
T ss_pred             HHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEE
T ss_conf             999997177945689873630112578999998641010299999864046787499999999875366525-8988998


Q ss_pred             ECCCHHHHHHHHHHHHHCC-CCCEEEEECEEECCCC-CCCCCC--CCC--CCHHHHHHHHHHHHH---------------
Q ss_conf             0220899999999998608-9817998331467998-250000--002--999999985899999---------------
Q batch____       149 GEKDFQQLALIRKMVADMG-FDIEIVGVPIMRAKDG-LALSSR--NGY--LTAEQRKIAPGLYKV---------------  207 (283)
Q Consensus       149 GeKD~QQl~iIr~mv~dL~-~~v~I~~~ptvRe~dG-LA~SSR--N~~--Ls~~eR~~A~~l~~a---------------  207 (283)
                      |.-.+|-+.+-|.+++.++ .+...+..|.+--.|| =-||+-  |.+  |+....+....|.+|               
T Consensus       175 G~DQ~~~~~l~rd~~~~~~~~~~~~i~~pll~~l~G~~KMSkS~~~s~I~l~D~~~~i~~KI~~a~t~~~~~~~~p~~~~  254 (328)
T c2cyaA_         175 GMDQRKAHMLARDVAEKLGRKKPVAIHTPIISSLQGPVKMSKSKPETAVFVVDSDDDIRRKIRKAYCPAKQVQGNPVLEI  254 (328)
T ss_dssp             EGGGHHHHHHHHHHHTTTTCCCCEEEEECCCBCSSCCCBCCSSSGGGSCBTTCCHHHHHHHHHTSCCCTTCCTTCHHHHH
T ss_pred             EHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf             32222589999999997298784577511234677877788888884588338989999999752387754554672200


Q ss_pred             ---------------------HHHHHHHHHCCCCCHHHHHHHHHHHHHC
Q ss_conf             ---------------------9999999983899989999999999850
Q batch____       208 ---------------------LSSIADKLQAGERDLDEIITIAGQELNE  235 (283)
Q Consensus       208 ---------------------L~~a~~~~~~g~~~~~~l~~~~~~~l~~  235 (283)
                                           +....+.+..|.-.+.++.....+.+.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~eel~~~~~~g~l~~~dlK~~la~~i~~  303 (328)
T c2cyaA_         255 ARYILFARDGFTLRVDVEYTSYEELERDYTDGRLHPLDLKNAVAESLIE  303 (328)
T ss_dssp             HHHTTTTSTTCCEECCCEESSHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             1221011100233206882018999999872898989999999999999