BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (133 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q65SL1 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 179 2e-44 UniRef50_Q3IJ52 Ribosome-binding factor A n=221 Tax=Gammaproteob... 161 8e-39 UniRef50_Q482T8 Ribosome-binding factor A n=2 Tax=Alteromonadale... 149 2e-35 UniRef50_B7V1F5 Ribosome-binding factor A n=6 Tax=Gammaproteobac... 127 2e-28 UniRef50_UPI0000E0F5A5 ribosome-binding factor A n=1 Tax=Glaciec... 126 3e-28 UniRef50_B0TQA1 Ribosome-binding factor A n=43 Tax=Gammaproteoba... 124 8e-28 UniRef50_C7R7H8 Ribosome-binding factor A n=1 Tax=Kangiella kore... 122 4e-27 UniRef50_Q8D2X7 Ribosome-binding factor A n=1 Tax=Wigglesworthia... 121 8e-27 UniRef50_Q057K0 Ribosome-binding factor A n=1 Tax=Buchnera aphid... 120 1e-26 UniRef50_Q3KI83 Ribosome-binding factor A n=14 Tax=Proteobacteri... 120 2e-26 UniRef50_B8D9G1 Ribosome-binding factor A n=4 Tax=Buchnera aphid... 117 9e-26 UniRef50_A3D7K5 Ribosome-binding factor A n=20 Tax=Gammaproteoba... 115 5e-25 UniRef50_Q1LSK9 Ribosome-binding factor A n=1 Tax=Baumannia cica... 115 6e-25 UniRef50_Q48E78 Ribosome-binding factor A n=11 Tax=Gammaproteoba... 115 6e-25 UniRef50_B5JRR1 Ribosome-binding factor A n=1 Tax=gamma proteoba... 112 3e-24 UniRef50_Q21H62 Ribosome-binding factor A n=1 Tax=Saccharophagus... 111 7e-24 UniRef50_Q0A798 Ribosome-binding factor A n=3 Tax=Ectothiorhodos... 109 2e-23 UniRef50_Q1YSY1 Ribosome-binding factor A n=1 Tax=gamma proteoba... 108 8e-23 UniRef50_C5BPV8 Ribosome-binding factor A n=9 Tax=Proteobacteria... 107 2e-22 UniRef50_B3PI97 Ribosome-binding factor A n=1 Tax=Cellvibrio jap... 106 2e-22 UniRef50_A1U5Z9 Ribosome-binding factor A n=7 Tax=Gammaproteobac... 106 2e-22 UniRef50_Q5NZS0 Ribosome-binding factor A n=1 Tax=Aromatoleum ar... 105 3e-22 UniRef50_Q493T6 Ribosome-binding factor A n=2 Tax=Candidatus Blo... 100 1e-20 UniRef50_Q609C1 Ribosome-binding factor A n=1 Tax=Methylococcus ... 100 2e-20 UniRef50_C8W4P3 Ribosome-binding factor A n=3 Tax=Clostridia Rep... 99 3e-20 UniRef50_Q5X1C4 Ribosome-binding factor A n=6 Tax=Legionella Rep... 99 5e-20 UniRef50_D0L0S5 Ribosome-binding factor A n=1 Tax=Halothiobacill... 99 5e-20 UniRef50_Q1GXD5 Ribosome-binding factor A n=3 Tax=Betaproteobact... 98 7e-20 UniRef50_P59411 Ribosome-binding factor A n=1 Tax=Buchnera aphid... 97 1e-19 UniRef50_A0Q8F2 Ribosome-binding factor A n=18 Tax=Francisella R... 97 2e-19 UniRef50_Q1MZS3 Ribosome-binding factor A n=1 Tax=Bermanella mar... 96 4e-19 UniRef50_A7BQM5 Ribosome-binding factor A n=1 Tax=Beggiatoa sp. ... 96 4e-19 UniRef50_B1I386 Ribosome-binding factor A n=1 Tax=Candidatus Des... 96 5e-19 UniRef50_Q3J9B7 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 94 2e-18 UniRef50_A6T0Y7 Ribosome-binding factor A n=3 Tax=Betaproteobact... 93 2e-18 UniRef50_A4BAM6 Ribosome-binding factor A n=2 Tax=Gammaproteobac... 92 3e-18 UniRef50_C4Z5N8 Ribosome-binding factor A n=10 Tax=Firmicutes Re... 91 9e-18 UniRef50_A4XL69 Ribosome-binding factor A n=15 Tax=Firmicutes Re... 91 1e-17 UniRef50_Q2RJM4 Ribosome-binding factor A n=5 Tax=Bacteria RepID... 91 1e-17 UniRef50_B2A398 Ribosome-binding factor A n=9 Tax=Firmicutes Rep... 91 1e-17 UniRef50_Q31GK4 Ribosome-binding factor A n=1 Tax=Thiomicrospira... 91 1e-17 UniRef50_A7X1Q2 Ribosome-binding factor A n=133 Tax=Bacillales R... 91 2e-17 UniRef50_C5S648 Ribosome-binding factor A n=1 Tax=Allochromatium... 90 2e-17 UniRef50_A4J5X1 Ribosome-binding factor A n=1 Tax=Desulfotomacul... 89 3e-17 UniRef50_D1CFX0 Ribosome-binding factor A n=1 Tax=Thermobaculum ... 89 3e-17 UniRef50_A9KNW3 Ribosome-binding factor A n=23 Tax=Bacteria RepI... 89 3e-17 UniRef50_D1VSB2 Ribosome-binding factor A n=1 Tax=Peptoniphilus ... 89 3e-17 UniRef50_C2BHN3 Ribosome-binding factor A n=3 Tax=Anaerococcus R... 89 6e-17 UniRef50_C7RGP1 Ribosome-binding factor A n=2 Tax=Anaerococcus R... 88 7e-17 UniRef50_Q18BH6 Ribosome-binding factor A n=6 Tax=Clostridium Re... 88 9e-17 UniRef50_B8FCY7 Ribosome-binding factor A n=1 Tax=Desulfatibacil... 88 1e-16 UniRef50_A6TRK6 Ribosome-binding factor A n=2 Tax=Alkaliphilus R... 88 1e-16 UniRef50_C7RU80 Ribosome-binding factor A n=1 Tax=Candidatus Acc... 87 2e-16 UniRef50_B9KZ59 Ribosome-binding factor A n=1 Tax=Thermomicrobiu... 86 3e-16 UniRef50_B8JFY8 Ribosome-binding factor A n=4 Tax=Anaeromyxobact... 86 4e-16 UniRef50_A5WBS6 Ribosome-binding factor A n=19 Tax=Moraxellaceae... 86 4e-16 UniRef50_C5RLI4 Ribosome-binding factor A n=2 Tax=Clostridium Re... 86 5e-16 UniRef50_B5YHT9 Ribosome-binding factor A n=1 Tax=Thermodesulfov... 86 5e-16 UniRef50_C1A8N9 Ribosome-binding factor A n=1 Tax=Gemmatimonas a... 85 7e-16 UniRef50_Q3BRP6 Ribosome-binding factor A n=19 Tax=Xanthomonadac... 85 8e-16 UniRef50_A4IMD9 Ribosome-binding factor A n=50 Tax=Firmicutes Re... 84 1e-15 UniRef50_C2KV11 Ribosome-binding factor A n=1 Tax=Oribacterium s... 84 1e-15 UniRef50_B5YEH6 Ribosome-binding factor A n=2 Tax=Dictyoglomus R... 84 2e-15 UniRef50_B6BVJ9 Ribosome-binding factor A n=1 Tax=beta proteobac... 84 2e-15 UniRef50_B6J6B2 Ribosome-binding factor A n=6 Tax=Coxiella burne... 82 4e-15 UniRef50_Q0VSS0 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 82 7e-15 UniRef50_A9AV50 Ribosome-binding factor A n=1 Tax=Herpetosiphon ... 81 9e-15 UniRef50_Q044B6 Ribosome-binding factor A n=58 Tax=Lactobacillal... 81 9e-15 UniRef50_Q2LWT9 Ribosome-binding factor A n=2 Tax=Syntrophobacte... 80 1e-14 UniRef50_D1C376 Ribosome-binding factor A n=1 Tax=Sphaerobacter ... 80 2e-14 UniRef50_A0LE17 Ribosome-binding factor A n=1 Tax=Magnetococcus ... 80 2e-14 UniRef50_B4E7L2 Ribosome-binding factor A n=21 Tax=Burkholderial... 80 2e-14 UniRef50_D1Y7J4 Ribosome-binding factor A n=1 Tax=Pyramidobacter... 80 2e-14 UniRef50_A3MJW5 Ribosome-binding factor A n=41 Tax=Burkholderial... 80 3e-14 UniRef50_UPI000196CD5A hypothetical protein CATMIT_02506 n=1 Tax... 80 3e-14 UniRef50_Q3AB99 Ribosome-binding factor A n=1 Tax=Carboxydotherm... 79 3e-14 UniRef50_A5EWY8 Ribosome-binding factor A n=1 Tax=Dichelobacter ... 79 5e-14 UniRef50_Q1K0G2 Ribosome-binding factor A n=1 Tax=Desulfuromonas... 79 5e-14 UniRef50_D1BAC0 Ribosome-binding factor A n=1 Tax=Thermanaerovib... 79 5e-14 UniRef50_A5FQR5 Ribosome-binding factor A n=5 Tax=Dehalococcoide... 79 6e-14 UniRef50_B9M1G1 Ribosome-binding factor A n=8 Tax=Desulfuromonad... 78 9e-14 UniRef50_C8X0G5 Ribosome-binding factor A n=3 Tax=Desulfovibrion... 78 9e-14 UniRef50_B9E1K3 Ribosome-binding factor A n=35 Tax=Clostridium R... 78 1e-13 UniRef50_A1KUJ5 Ribosome-binding factor A n=28 Tax=Neisseriaceae... 77 1e-13 UniRef50_UPI0000E87C6E ribosome-binding factor A n=1 Tax=Methylo... 77 1e-13 UniRef50_A1HSB5 Ribosome-binding factor A n=1 Tax=Thermosinus ca... 77 2e-13 UniRef50_Q0AYI7 Ribosome-binding factor A n=1 Tax=Syntrophomonas... 77 2e-13 UniRef50_A9ITX2 Ribosome-binding factor A n=5 Tax=Bordetella Rep... 77 2e-13 UniRef50_A6NTY2 Putative uncharacterized protein n=1 Tax=Bactero... 77 2e-13 UniRef50_B2S4C7 Ribosome-binding factor A n=4 Tax=Treponema RepI... 76 3e-13 UniRef50_Q74CT2 Ribosome-binding factor A n=1 Tax=Geobacter sulf... 76 3e-13 UniRef50_C8NBH2 Ribosome-binding factor A n=1 Tax=Cardiobacteriu... 76 4e-13 UniRef50_C6C0D1 Ribosome-binding factor A n=2 Tax=Desulfovibrio ... 76 4e-13 UniRef50_C1TMK9 Ribosome-binding factor A n=1 Tax=Dethiosulfovib... 75 5e-13 UniRef50_D2UCR3 Probable ribosome-binding factor a protein n=1 T... 75 6e-13 UniRef50_Q1DAM4 Ribosome-binding factor A n=3 Tax=Cystobacterine... 75 8e-13 UniRef50_C9RKT5 Ribosome-binding factor A n=1 Tax=Fibrobacter su... 74 1e-12 UniRef50_C0QHM3 Ribosome-binding factor A n=1 Tax=Desulfobacteri... 74 2e-12 UniRef50_Q8DVP8 Ribosome-binding factor A n=5 Tax=Lactobacillale... 74 2e-12 UniRef50_B1IA81 Ribosome-binding factor A n=30 Tax=Streptococcus... 74 2e-12 UniRef50_B5Y926 Ribosome-binding factor A n=1 Tax=Coprothermobac... 73 2e-12 UniRef50_D1BM61 Ribosome-binding factor A n=8 Tax=Veillonellacea... 72 4e-12 UniRef50_B2GBN8 Ribosome-binding factor A n=86 Tax=Lactobacillal... 72 7e-12 UniRef50_UPI00016C0EBD ribosome-binding factor A n=1 Tax=Epulopi... 72 7e-12 UniRef50_Q0RDS6 Ribosome-binding factor A n=44 Tax=Actinomycetal... 71 9e-12 UniRef50_UPI0001C31DB9 ribosome-binding factor A n=1 Tax=Conexib... 71 9e-12 UniRef50_B0SH19 Ribosome-binding factor A n=2 Tax=Leptospira bif... 71 1e-11 UniRef50_Q2J730 Ribosome-binding factor A n=14 Tax=Actinomycetal... 71 1e-11 UniRef50_C0WBC7 Ribosome-binding factor A n=1 Tax=Acidaminococcu... 71 1e-11 UniRef50_A4S0F7 Predicted protein (Fragment) n=3 Tax=Mamiellales... 71 1e-11 UniRef50_B0CDK8 Ribosome-binding factor A n=10 Tax=Cyanobacteria... 71 1e-11 UniRef50_A5ZAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 70 1e-11 UniRef50_C7H6A6 Ribosome-binding factor A n=3 Tax=Ruminococcacea... 70 2e-11 UniRef50_C8QYE1 Ribosome-binding factor A n=1 Tax=Desulfurivibri... 70 2e-11 UniRef50_Q6MD65 Ribosome-binding factor A n=1 Tax=Candidatus Pro... 70 3e-11 UniRef50_D0LZ88 Ribosome-binding factor A n=1 Tax=Haliangium och... 70 3e-11 UniRef50_C1EAK4 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 69 4e-11 UniRef50_A8PNL0 Ribosome-binding factor A n=1 Tax=Rickettsiella ... 69 4e-11 UniRef50_D2MPT2 Ribosome-binding factor A n=7 Tax=Bacteria RepID... 69 4e-11 UniRef50_B0S1E4 Ribosome-binding factor A n=2 Tax=Finegoldia mag... 69 4e-11 UniRef50_B0MY67 Putative uncharacterized protein n=1 Tax=Alistip... 69 5e-11 UniRef50_D2QJ35 Ribosome-binding factor A n=2 Tax=Flexibacterace... 69 5e-11 UniRef50_C4FWY3 Putative uncharacterized protein n=1 Tax=Catonel... 69 6e-11 UniRef50_C9M6R1 Ribosome-binding factor A n=1 Tax=Jonquetella an... 69 7e-11 UniRef50_B7GNA2 Ribosome-binding factor A n=10 Tax=Bifidobacteri... 69 7e-11 UniRef50_A1TSK2 Ribosome-binding factor A n=15 Tax=Burkholderial... 68 7e-11 UniRef50_Q2S1N8 Ribosome-binding factor A n=1 Tax=Salinibacter r... 68 9e-11 UniRef50_Q6AJY5 Ribosome-binding factor A n=1 Tax=Desulfotalea p... 68 1e-10 UniRef50_C8WI33 Ribosome-binding factor A n=3 Tax=Coriobacteriac... 68 1e-10 UniRef50_D1R4P7 Putative uncharacterized protein n=1 Tax=Parachl... 67 1e-10 UniRef50_Q0SM49 Ribosome-binding factor A n=18 Tax=Borrelia burg... 67 2e-10 UniRef50_C0GUB2 Ribosome-binding factor A n=1 Tax=Desulfonatrono... 67 2e-10 UniRef50_A5UZQ3 Ribosome-binding factor A n=5 Tax=Chloroflexacea... 66 3e-10 UniRef50_A6GK84 Ribosome-binding factor A n=1 Tax=Plesiocystis p... 66 4e-10 UniRef50_Q3ELJ3 Ribosome-binding factor A n=1 Tax=Bacillus thuri... 66 4e-10 UniRef50_C8NZL4 Ribosome-binding factor A n=1 Tax=Erysipelothrix... 66 4e-10 UniRef50_B4RC51 Ribosome-binding factor A n=2 Tax=Alphaproteobac... 65 5e-10 UniRef50_C5NYH6 Ribosome-binding factor A n=1 Tax=Gemella haemol... 65 6e-10 UniRef50_A5FV22 Ribosome-binding factor A n=4 Tax=Acetobacterace... 65 6e-10 UniRef50_O65693 Probable ribosome-binding factor A, chloroplasti... 65 6e-10 UniRef50_D0MI92 Ribosome-binding factor A n=1 Tax=Rhodothermus m... 65 6e-10 UniRef50_C6W5Y8 Ribosome-binding factor A n=1 Tax=Dyadobacter fe... 65 6e-10 UniRef50_D2MK31 Ribosome-binding factor A n=1 Tax=Candidatus Por... 65 6e-10 UniRef50_B3QZW6 Ribosome-binding factor A n=4 Tax=Candidatus Phy... 65 7e-10 UniRef50_Q2JW85 Ribosome-binding factor A n=18 Tax=Cyanobacteria... 65 7e-10 UniRef50_C2BRN5 Ribosome-binding factor A n=3 Tax=Mobiluncus Rep... 65 7e-10 UniRef50_B9KAB3 Ribosome-binding factor A n=1 Tax=Thermotoga nea... 64 1e-09 UniRef50_A8ZZ63 Ribosome-binding factor A n=1 Tax=Desulfococcus ... 64 1e-09 UniRef50_B1LCH6 Ribosome-binding factor A n=8 Tax=Thermotogaceae... 64 1e-09 UniRef50_C6XX51 Ribosome-binding factor A n=4 Tax=Sphingobacteri... 64 1e-09 UniRef50_B2S1E6 Ribosome-binding factor A n=2 Tax=Borrelia RepID... 64 2e-09 UniRef50_Q1Q1G7 Similar to ribosome-binding factor A n=1 Tax=Can... 64 2e-09 UniRef50_A5CXX7 Ribosome-binding factor A n=4 Tax=Bacteria RepID... 63 3e-09 UniRef50_Q46HR0 Ribosome-binding factor A n=2 Tax=Prochlorococcu... 63 3e-09 UniRef50_C0EAK4 Putative uncharacterized protein n=2 Tax=Clostri... 63 3e-09 UniRef50_C0QZC0 Ribosome-binding factor A n=2 Tax=Brachyspira Re... 63 3e-09 UniRef50_A4E6U6 Putative uncharacterized protein n=1 Tax=Collins... 63 3e-09 UniRef50_A9G882 Ribosome-binding factor A n=1 Tax=Sorangium cell... 63 3e-09 UniRef50_Q6MMS5 Ribosome-binding factor A n=1 Tax=Bdellovibrio b... 62 5e-09 UniRef50_Q7V3G3 Ribosome-binding factor A n=7 Tax=Prochlorococcu... 62 8e-09 UniRef50_B0MQX5 Putative uncharacterized protein n=1 Tax=Eubacte... 61 9e-09 UniRef50_C7H128 MgpA protein n=1 Tax=Eubacterium saphenum ATCC 4... 61 1e-08 UniRef50_Q1NKW1 Ribosome-binding factor A n=1 Tax=delta proteoba... 61 1e-08 UniRef50_C8W718 Ribosome-binding factor A n=5 Tax=Coriobacteriac... 61 1e-08 UniRef50_B5RMZ6 Ribosome-binding factor A n=2 Tax=Borrelia RepID... 60 2e-08 UniRef50_A1A0A3 Ribosome-binding factor A n=6 Tax=Bifidobacteriu... 60 2e-08 UniRef50_D0WDY7 Ribosome-binding factor A n=1 Tax=Slackia exigua... 60 2e-08 UniRef50_B0PH14 Putative uncharacterized protein n=2 Tax=Clostri... 60 2e-08 UniRef50_A7IC07 Ribosome-binding factor A n=35 Tax=Rhizobiales R... 60 2e-08 UniRef50_B0VFC2 Putative ribosome-binding factor A (RbfA-like) n... 60 2e-08 UniRef50_A4X4N9 Ribosome-binding factor A n=4 Tax=Actinomycetale... 60 2e-08 UniRef50_B3QUN3 Ribosome-binding factor A n=1 Tax=Chloroherpeton... 60 3e-08 UniRef50_A2CCY5 Ribosome-binding factor A n=23 Tax=cellular orga... 60 3e-08 UniRef50_C4XE44 Putative uncharacterized protein n=1 Tax=Mycopla... 59 3e-08 UniRef50_Q04GM9 Ribosome-binding factor A n=2 Tax=Oenococcus oen... 59 4e-08 UniRef50_A0M6N1 Ribosome-binding factor A n=13 Tax=Bacteroidetes... 59 4e-08 UniRef50_B8DW44 Ribosome-binding factor A n=4 Tax=Bifidobacteriu... 59 4e-08 UniRef50_Q4FNM8 Ribosome-binding factor A n=3 Tax=Candidatus Pel... 59 5e-08 UniRef50_A4QEZ1 Ribosome-binding factor A n=8 Tax=Actinomycetale... 59 6e-08 UniRef50_C6X0X9 Ribosome-binding factor A n=1 Tax=Flavobacteriac... 59 6e-08 UniRef50_Q0AK66 Ribosome-binding factor A n=2 Tax=Hyphomonadacea... 58 8e-08 UniRef50_B5W1W9 Ribosome-binding factor A n=1 Tax=Arthrospira ma... 57 1e-07 UniRef50_Q98PP7 Ribosome-binding factor A n=1 Tax=Mycoplasma pul... 57 2e-07 UniRef50_D0WR20 Ribosome-binding factor A n=1 Tax=Actinomyces sp... 57 2e-07 UniRef50_C1SPK3 Ribosome-binding factor A n=1 Tax=Denitrovibrio ... 57 2e-07 UniRef50_Q5NQ28 Ribosome-binding factor A n=3 Tax=Zymomonas mobi... 57 3e-07 UniRef50_A6W7Z4 Ribosome-binding factor A n=14 Tax=Actinobacteri... 56 3e-07 UniRef50_B1CB53 Putative uncharacterized protein n=1 Tax=Anaerof... 55 5e-07 UniRef50_A9BI93 Ribosome-binding factor A n=1 Tax=Petrotoga mobi... 55 7e-07 UniRef50_Q8RHJ7 Ribosome-binding factor A n=14 Tax=Fusobacterium... 55 8e-07 UniRef50_B9XFC2 Ribosome-binding factor A n=1 Tax=bacterium Elli... 55 1e-06 UniRef50_UPI00016C38FF probable ribosome-binding factor A n=1 Ta... 54 1e-06 UniRef50_B8ZRT3 Ribosome-binding factor A n=7 Tax=Actinomycetale... 54 1e-06 UniRef50_C6HXK3 Ribosome-binding factor A n=1 Tax=Leptospirillum... 54 1e-06 UniRef50_Q1IIT5 Ribosome-binding factor A n=1 Tax=Candidatus Kor... 54 1e-06 UniRef50_Q11P01 Ribosome-binding factor A n=1 Tax=Cytophaga hutc... 54 1e-06 UniRef50_Q7XYI2 Ribosome-binding factor A (Fragment) n=1 Tax=Big... 54 2e-06 UniRef50_A3HU14 Ribosome-binding factor A n=1 Tax=Algoriphagus s... 54 2e-06 UniRef50_C9LIQ3 Ribosome-binding factor A n=7 Tax=Prevotella Rep... 54 2e-06 UniRef50_A5IZH0 Ribosome-binding factor A n=1 Tax=Mycoplasma aga... 53 3e-06 UniRef50_C0YTT6 Ribosome-binding factor A n=1 Tax=Chryseobacteri... 53 3e-06 UniRef50_Q7URR1 Ribosome-binding factor A n=2 Tax=Planctomycetac... 53 4e-06 UniRef50_Q1AW53 Ribosome-binding factor A n=1 Tax=Rubrobacter xy... 52 4e-06 UniRef50_C7JG37 Ribosome-binding factor A n=8 Tax=Acetobacter pa... 52 4e-06 UniRef50_C6XFV6 Ribosome-binding factor A n=1 Tax=Candidatus Lib... 52 5e-06 UniRef50_Q14NW2 Putative ribosome-binding factor a protein n=1 T... 52 7e-06 UniRef50_B0B9K3 Ribosome-binding factor A n=13 Tax=Chlamydiaceae... 52 8e-06 UniRef50_C1ZB80 Ribosome-binding factor A n=1 Tax=Planctomyces l... 52 8e-06 UniRef50_A6KYQ5 Ribosome-binding factor A n=36 Tax=Bacteria RepI... 52 8e-06 UniRef50_Q7NBZ3 Ribosome-binding factor A n=1 Tax=Mycoplasma gal... 52 8e-06 UniRef50_A8J0V0 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 51 9e-06 UniRef50_B1GZN7 Ribosome-binding factor A n=1 Tax=uncultured Ter... 51 1e-05 UniRef50_B2V965 Ribosome-binding factor A n=3 Tax=Sulfurihydroge... 51 1e-05 UniRef50_A6DGZ4 Ribosome-binding factor A n=1 Tax=Lentisphaera a... 50 2e-05 UniRef50_Q04U30 Ribosome-binding factor A n=4 Tax=Leptospira Rep... 50 2e-05 UniRef50_B2UQQ2 Ribosome-binding factor A n=1 Tax=Akkermansia mu... 50 2e-05 UniRef50_A6LN42 Ribosome-binding factor A n=1 Tax=Thermosipho me... 50 3e-05 UniRef50_A3UIH6 Ribosome-binding factor A n=1 Tax=Oceanicaulis a... 50 3e-05 UniRef50_C7PES0 Ribosome-binding factor A n=1 Tax=Chitinophaga p... 49 3e-05 UniRef50_A8SMZ5 Putative uncharacterized protein n=1 Tax=Parvimo... 49 4e-05 UniRef50_B3DXW7 Ribosome-binding factor A n=1 Tax=Methylacidiphi... 49 4e-05 UniRef50_C0VVG3 Ribosome-binding factor A n=2 Tax=Corynebacteriu... 49 5e-05 UniRef50_A6CF42 Probable ribosome-binding factor A n=1 Tax=Planc... 49 5e-05 UniRef50_Q01W29 Ribosome-binding factor A n=1 Tax=Candidatus Sol... 49 5e-05 UniRef50_C5JAM5 Ribosome-binding factor A n=1 Tax=uncultured bac... 49 5e-05 UniRef50_C1F438 Ribosome-binding factor A n=1 Tax=Acidobacterium... 49 6e-05 UniRef50_B9JYK7 Ribosome-binding factor A n=12 Tax=Rhizobiales R... 48 8e-05 UniRef50_Q5PAJ6 Ribosome-binding factor A n=4 Tax=Anaplasma RepI... 48 8e-05 UniRef50_Q6F193 Ribosome-binding factor A n=1 Tax=Mesoplasma flo... 48 8e-05 UniRef50_D2R7W9 Ribosome-binding factor A n=1 Tax=Pirellula stal... 48 8e-05 UniRef50_B6AR14 Probable ribosome-binding factor A n=2 Tax=Lepto... 47 3e-04 UniRef50_UPI0001745B62 ribosome-binding factor A n=1 Tax=Verruco... 46 3e-04 UniRef50_Q8EWT9 Ribosome-binding factor A n=1 Tax=Mycoplasma pen... 46 3e-04 UniRef50_A9NF13 Ribosome-binding factor A n=1 Tax=Acholeplasma l... 46 3e-04 UniRef50_D1AY63 Ribosome-binding factor A n=5 Tax=Fusobacteriace... 46 4e-04 UniRef50_Q1DFL3 Putative ribosome-binding factor A n=1 Tax=Myxoc... 45 6e-04 UniRef50_C7LK64 Putative ribosome-binding factor A n=1 Tax=Candi... 45 8e-04 UniRef50_A1KMI1 Ribosome-binding factor A n=26 Tax=Actinomycetal... 44 0.001 UniRef50_A0NUK1 Ribosome-binding factor A n=3 Tax=Rhodobacterace... 44 0.001 UniRef50_B3PNC5 Ribosome-binding factor A n=1 Tax=Mycoplasma art... 44 0.002 UniRef50_Q83ND3 Ribosome-binding factor A n=2 Tax=Tropheryma whi... 44 0.002 UniRef50_C0QU19 Ribosome-binding factor A n=1 Tax=Persephonella ... 44 0.002 UniRef50_Q3YS02 Ribosome-binding factor A n=6 Tax=canis group Re... 44 0.002 UniRef50_Q2G5E9 Ribosome-binding factor A n=6 Tax=Sphingomonadal... 43 0.003 UniRef50_B3ER34 Putative uncharacterized protein n=1 Tax=Candida... 43 0.003 UniRef50_Q26H81 Ribosome-binding factor A n=1 Tax=Flavobacteria ... 43 0.003 UniRef50_Q1IXP4 Ribosome-binding factor A n=1 Tax=Deinococcus ge... 43 0.004 UniRef50_B6YQT6 Ribosome-binding factor A n=1 Tax=Candidatus Azo... 43 0.004 UniRef50_D1J8W5 Ribosome-binding factor A n=1 Tax=Mycoplasma hom... 42 0.005 UniRef50_A6GW80 Ribosome-binding factor A n=12 Tax=Bacteroidetes... 42 0.006 >UniRef50_Q65SL1 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_MANSM Length = 131 Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 87/132 (65%), Positives = 116/132 (87%), Gaps = 1/132 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M++EF R RVAQE+QKEIA+ILQRE+KDPR+GM+T VS VE+SRDLAYAK++VTFL + Sbjct: 1 MSREFKRSDRVAQELQKEIAVILQREVKDPRIGMVT-VSDVEVSRDLAYAKIFVTFLFNN 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D++A+K G+KAL++A+ +IRSL+GKAMRLRIVPEL F YD SLVEGMRMSNLVT+VV+ D Sbjct: 60 DDEAIKQGMKALEKAAPYIRSLVGKAMRLRIVPELRFEYDRSLVEGMRMSNLVTNVVRSD 119 Query: 121 EERRVNPDDSKE 132 +ER ++ ++ ++ Sbjct: 120 KERHIDEENGED 131 >UniRef50_Q3IJ52 Ribosome-binding factor A n=221 Tax=Gammaproteobacteria RepID=RBFA_PSEHT Length = 166 Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 1/131 (0%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +EF R RVAQ++QKEIA+ILQREIKDPRLGM+T VS VE+SRDL+YAK+++T N +D+ Sbjct: 2 REFSRTDRVAQQIQKEIAVILQREIKDPRLGMVT-VSAVEVSRDLSYAKIFITVFNTQDD 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 +A K L EA+G+IRSLLGK +R RI+PEL F DNSL+EGMR+SNLV S+++ D Sbjct: 61 NAAKQSANVLNEATGYIRSLLGKRIRARIMPELKFLVDNSLMEGMRISNLVDSIIREDNA 120 Query: 123 RRVNPDDSKED 133 + V + ED Sbjct: 121 KHVADETDVED 131 >UniRef50_Q482T8 Ribosome-binding factor A n=2 Tax=Alteromonadales RepID=RBFA_COLP3 Length = 142 Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 76/133 (57%), Positives = 98/133 (73%), Gaps = 2/133 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+E+ R RV Q++QKEIA IL REIKDPRL M TTVS VE++RDLAYAK++VTF ND Sbjct: 1 MAREYARTDRVGQQIQKEIATILMREIKDPRLSM-TTVSAVEVTRDLAYAKIFVTFFND- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ++D +KA ++ L EA G+IRSLLGK +R RI+P L F YD+S+ EG+RMS LV V D Sbjct: 59 NQDEIKASLEVLAEAEGYIRSLLGKRLRARIMPHLRFVYDSSMSEGVRMSALVDQAVASD 118 Query: 121 EERRVNPDDSKED 133 + DD++ D Sbjct: 119 KNGDAEVDDTQVD 131 >UniRef50_B7V1F5 Ribosome-binding factor A n=6 Tax=Gammaproteobacteria RepID=RBFA_PSEA8 Length = 130 Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 93/133 (69%), Gaps = 3/133 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R QR+ +MQ+E+A ++QREIKDPRLG++T ++GVE+SRD+A+AKV++T + Sbjct: 1 MAKDYSRTQRIGDQMQRELAQLIQREIKDPRLGLVT-ITGVEVSRDVAHAKVFITVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D + ++ L +A+G++R LLGK+M+LR VP+L F YD S+ G +S L+ V D Sbjct: 60 DAGKIALNMEILNDAAGYLRMLLGKSMKLRSVPQLHFHYDESIRRGAELSALIERAVAED 119 Query: 121 EERRVNPDDSKED 133 R + DD ED Sbjct: 120 GRR--HGDDETED 130 >UniRef50_UPI0000E0F5A5 ribosome-binding factor A n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F5A5 Length = 144 Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 4/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKD--PRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 MA+EF R RV+Q++ KEIA IL +E K P L M+T VSGVE+SRDLA+AKVYVTFL Sbjct: 1 MAREFSRTDRVSQQVHKEIASILNQEFKHQAPELCMVT-VSGVEISRDLAHAKVYVTFL- 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + DE+ VKA + L+E GF+R LL + +R+R P L F D S+ EGMR+SN+V+ V + Sbjct: 59 EMDEEKVKASMALLEEGKGFVRGLLSRRVRMRNTPALKFIQDRSITEGMRISNIVSQVTR 118 Query: 119 HDEERR 124 +E +R Sbjct: 119 DEEAKR 124 >UniRef50_B0TQA1 Ribosome-binding factor A n=43 Tax=Gammaproteobacteria RepID=RBFA_SHEHH Length = 142 Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 70/124 (56%), Positives = 101/124 (81%), Gaps = 2/124 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKEF R +R+AQ++Q+E+A +LQR++KDPR+G +T V+ V++SRDL+YAKVYVTF ++ Sbjct: 1 MAKEFSRTRRIAQQLQQELAQVLQRDMKDPRIGFVT-VNDVDVSRDLSYAKVYVTFF-EE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE V+ + AL A+G+IRSL+ M+LR++PEL F YD+SLVEGMRMSNLV+ V+ +D Sbjct: 59 DEKLVEQKVAALDAAAGYIRSLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVSRVISND 118 Query: 121 EERR 124 E ++ Sbjct: 119 EAKQ 122 >UniRef50_C7R7H8 Ribosome-binding factor A n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7H8_KANKD Length = 122 Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 56/119 (47%), Positives = 88/119 (73%), Gaps = 1/119 (0%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RVA ++Q+++A++LQRE+KDPRLG++T VSGVE++ DL AKV+VTFL +E + Sbjct: 4 ARAKRVADQIQRDLAVLLQREMKDPRLGIVT-VSGVEVTSDLQNAKVFVTFLGKDEEQEI 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K ++ L A+GF+RS L K++R+R VP L F +D S+VEG +M++L+ + DE ++ Sbjct: 63 KQALEVLTGAAGFLRSQLAKSIRMRSVPSLRFLFDKSIVEGQKMTSLIDKAISEDESKK 121 >UniRef50_Q8D2X7 Ribosome-binding factor A n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=RBFA_WIGBR Length = 125 Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 54/114 (47%), Positives = 87/114 (76%), Gaps = 1/114 (0%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 ++E R ++++E+Q++IALILQ++I DPR+G+ +TVSGV++S D ++AK++VTFLN Sbjct: 3 SRENNRKFKISKEIQRKIALILQQKINDPRIGI-STVSGVDLSSDFSHAKIFVTFLNKNT 61 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + +K+G+ L +AS FIR +L K MRLRI+P+LTF YD SL++G + +L + Sbjct: 62 KQQIKSGLFILNKASFFIRKILNKTMRLRIIPKLTFIYDYSLIKGRNIDDLFNN 115 >UniRef50_Q057K0 Ribosome-binding factor A n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=RBFA_BUCCC Length = 116 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 54/116 (46%), Positives = 83/116 (71%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K+F R R+ + + KEIA+I+Q+ ++DPRL T++ V++S DL+YAKV++TFLN Sbjct: 1 MLKDFSRSMRLERSLYKEIAVIIQKNLRDPRLNSFITITEVKLSYDLSYAKVFITFLNYD 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D+ +K + LQ A+G+IRSLL K + LRIVP+L F YD SL+ G+ +S L+ ++ Sbjct: 61 DKKNIKIILGILQNATGYIRSLLNKKIYLRIVPKLFFVYDTSLINGIFISELIKNI 116 >UniRef50_Q3KI83 Ribosome-binding factor A n=14 Tax=Proteobacteria RepID=RBFA_PSEPF Length = 133 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 90/134 (67%), Gaps = 3/134 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKE+ R QR+ +MQ+E+A +++RE+KDPR+G++T ++ VE+SRD+ +AK+++T + Sbjct: 1 MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVT-ITAVEVSRDVGHAKIFITVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + + IK L A+GF+R L + M+LR VP+L F YD S+V G +S L+ V D Sbjct: 60 NAEDIAQSIKVLNAAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAED 119 Query: 121 EER--RVNPDDSKE 132 + P+D+KE Sbjct: 120 NQHVAAAEPEDTKE 133 >UniRef50_B8D9G1 Ribosome-binding factor A n=4 Tax=Buchnera aphidicola RepID=RBFA_BUCA5 Length = 120 Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 53/118 (44%), Positives = 83/118 (70%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K F R R+AQE+QK+IA I+Q +KDPR+ + TVS V++S+DL+YA+++V+FL Sbjct: 1 MEKLFNRSDRIAQELQKKIAAIIQHSLKDPRIKTIITVSEVQVSKDLSYAQIFVSFLESD 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + + VK I L AS +IR LL K M+LRIVP + F +D+S ++G ++S ++ ++ K Sbjct: 61 NNEKVKKKITILNRASSYIRKLLCKRMKLRIVPNIIFHHDDSFLKGNKISCILENLTK 118 >UniRef50_A3D7K5 Ribosome-binding factor A n=20 Tax=Gammaproteobacteria RepID=RBFA_SHEB5 Length = 152 Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/124 (52%), Positives = 99/124 (79%), Gaps = 2/124 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKEF R +R+AQ++Q+E+A +LQR++KDPR+G +T V+ V++SRDL+YAKV+VTF ++ Sbjct: 1 MAKEFSRTRRIAQQLQQELAQVLQRDMKDPRIGFVT-VNDVDVSRDLSYAKVFVTFF-EE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D+ V+ + AL A+ +IR+L+ M+LR++PEL F YD+SLVEGMRMSNLV+ V+ D Sbjct: 59 DKAVVQEKLNALISAAPYIRTLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVSQVINQD 118 Query: 121 EERR 124 + ++ Sbjct: 119 KAKQ 122 >UniRef50_Q1LSK9 Ribosome-binding factor A n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=RBFA_BAUCH Length = 134 Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 5/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF---L 57 MA + R +R+A E+QK+I + LQ I+DPRL TT+S V +S DL A V+V F Sbjct: 1 MANVYSRKKRIAHEIQKKINISLQHNIRDPRL-RKTTISWVSVSHDLGSATVFVIFNGIQ 59 Query: 58 ND-KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 ND + + +K IK LQ ASGFIR LLGK M LRIVP+LTF YD SL G+ + LV + Sbjct: 60 NDNQTSEEIKKRIKTLQAASGFIRYLLGKTMHLRIVPKLTFVYDQSLSHGIYIHELVNKI 119 Query: 117 VKHDEE 122 ++ D + Sbjct: 120 IREDHK 125 >UniRef50_Q48E78 Ribosome-binding factor A n=11 Tax=Gammaproteobacteria RepID=RBFA_PSE14 Length = 138 Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 88/135 (65%), Gaps = 4/135 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKE+ R QR+ +MQ+E+A +++REIKDPR+G++T ++ V++SRD+ +AK+++T + Sbjct: 1 MAKEYSRTQRIGDQMQRELAQLIRREIKDPRVGLVT-ITAVDVSRDVGHAKIFMTVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + IK L A+GF+R L + M+LR VP+L F YD S+V G +S L+ V D Sbjct: 60 SAEEIAQTIKVLNSAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAQD 119 Query: 121 ---EERRVNPDDSKE 132 +E +PD E Sbjct: 120 GQHQEGSASPDAKPE 134 >UniRef50_B5JRR1 Ribosome-binding factor A n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRR1_9GAMM Length = 142 Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 84/130 (64%), Gaps = 4/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R RVA ++QK++A +++ E+KDPRL T+ V ++RDL+ AK+Y+T L+DK Sbjct: 14 MAKDYPRSYRVADQIQKDLANLIRTEVKDPRLSDFVTLEEVRVTRDLSQAKIYITTLDDK 73 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ED+ L ASGF+R +LGK +RLR++P+L F YD + E R+ L+ + D Sbjct: 74 AEDSA----AVLNRASGFLRGVLGKRLRLRVIPQLHFIYDATQEEAQRIDGLIREAIASD 129 Query: 121 EERRVNPDDS 130 E+ + DS Sbjct: 130 EQHHADDSDS 139 >UniRef50_Q21H62 Ribosome-binding factor A n=1 Tax=Saccharophagus degradans 2-40 RepID=RBFA_SACD2 Length = 128 Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 85/123 (69%), Gaps = 1/123 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R R+A +Q+ +A ++Q E++DPRLG++ ++ V+++RDL+ AKVYVT + K Sbjct: 1 MPREFFRSDRIADAIQRSLARVIQTEVRDPRLGLVN-INSVDVTRDLSIAKVYVTVVGAK 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E + +K L +A+GF+R+++ K + +R P L+FFYD + V+G +SNL+ V D Sbjct: 60 EESESEVAVKVLNKAAGFLRNVIAKELTMRSAPRLSFFYDRTAVQGQNLSNLIDRAVAAD 119 Query: 121 EER 123 ++R Sbjct: 120 KQR 122 >UniRef50_Q0A798 Ribosome-binding factor A n=3 Tax=Ectothiorhodospiraceae RepID=RBFA_ALHEH Length = 130 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 89/133 (66%), Gaps = 5/133 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M ++F R +RV +++Q+E+A +++ E++DPRLGM+T VS V +SRDLA+AKV+VT L Sbjct: 1 MPRDFPRTRRVGEQIQRELAELIRDELRDPRLGMVT-VSEVTVSRDLAHAKVFVTALGGS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DED K ++ L A+G++R LLG+ +R+R VP L F +D + G R+S L+ V Sbjct: 60 DEDNAKT-VEVLTRAAGYLRKLLGQRLRIRQVPALHFQHDTAFDRGDRLSRLIDEAV--- 115 Query: 121 EERRVNPDDSKED 133 EE R DD K D Sbjct: 116 EEDRQQHDDDKPD 128 >UniRef50_Q1YSY1 Ribosome-binding factor A n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSY1_9GAMM Length = 142 Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 82/113 (72%), Gaps = 1/113 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R +RV+ +Q+E+A +++ E++DPR+GM+ V+ V++SRDLAY KV+V F+ D+ Sbjct: 1 MPREFTRAERVSDSVQQELATLIRSEVRDPRVGMVN-VTEVQISRDLAYGKVFVNFVGDR 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 +++ + + AL ASG++R LLG +++LRIVP+L F +D + G +S L+ Sbjct: 60 EQEQIDEAMAALNGASGYLRKLLGASIQLRIVPKLNFIFDETGRRGQHLSALI 112 >UniRef50_C5BPV8 Ribosome-binding factor A n=9 Tax=Proteobacteria RepID=RBFA_TERTT Length = 132 Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 50/121 (41%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R RVA MQ+ +A ++ EI+DPR+GM+ ++ VE+SRDLA AKV+VTF+ Sbjct: 1 MPKEFNRSDRVADAMQRSLANAIRMEIQDPRVGMVN-INAVEVSRDLALAKVFVTFIGVD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE A++ + L +A+GF+R+++ K + +R P + F+YD + V G +S+L+ + D Sbjct: 60 DERAIETSVSILNKAAGFLRNVVSKDLTIRSTPRIHFYYDKTAVRGQVLSSLIDRAIAED 119 Query: 121 E 121 + Sbjct: 120 K 120 >UniRef50_B3PI97 Ribosome-binding factor A n=1 Tax=Cellvibrio japonicus Ueda107 RepID=RBFA_CELJU Length = 136 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 85/133 (63%), Gaps = 4/133 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R RV+ +Q+ +A ++ +E++DPRLGM+ ++ V +SRD+A+AKVYVTF+ Sbjct: 1 MPREFTRSDRVSDAIQRLLAQVIPQEVRDPRLGMVN-INAVAVSRDMAFAKVYVTFVGVT 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE GI L +ASGF+RS + + + +R VP+L F YD + + G +S+L+ + D Sbjct: 60 DEPKSLEGIGILNKASGFLRSFVARELSMRTVPKLQFIYDKTSIRGQELSSLIDRAIAED 119 Query: 121 EERRVNPDDSKED 133 R++P + D Sbjct: 120 ---RLHPQGDQTD 129 >UniRef50_A1U5Z9 Ribosome-binding factor A n=7 Tax=Gammaproteobacteria RepID=RBFA_MARAV Length = 143 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/121 (42%), Positives = 82/121 (67%), Gaps = 5/121 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA+E+ R R+ +MQ+E+A ++QRE+KDPR+GM+ TV+ V++SRDL YA +Y++ L+ Sbjct: 1 MAREYSRVDRIGDQMQRELAQLIQREVKDPRVGMV-TVNDVKVSRDLGYADIYISLLSTE 59 Query: 59 --DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 +D V+ + L +ASGF+R +G+AM+LR+VP L F +D L + +M L+ Sbjct: 60 ELTEDSPEVQDSLTVLNKASGFLRGQVGRAMKLRVVPHLRFHFDKLLGQSRKMDRLIREA 119 Query: 117 V 117 V Sbjct: 120 V 120 >UniRef50_Q5NZS0 Ribosome-binding factor A n=1 Tax=Aromatoleum aromaticum EbN1 RepID=RBFA_AZOSE Length = 127 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 88/130 (67%), Gaps = 3/130 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R QRVA+++++E+A +++ E+KDPR+G +T ++ VE++ D A+AKV+ T + K Sbjct: 1 MPKEFSRSQRVAEQVRRELAELIRLEVKDPRVGFIT-LTDVEITPDYAHAKVFFTSM--K 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E+ + + L ASGF+R LGK +R+ +PEL F YD+S+ G RMS L+ VV+ D Sbjct: 58 GEEGLDEILTGLHRASGFLRRELGKRVRIHTLPELHFHYDSSVERGSRMSQLIDQVVRDD 117 Query: 121 EERRVNPDDS 130 + R + +S Sbjct: 118 DARHKDDPES 127 >UniRef50_Q493T6 Ribosome-binding factor A n=2 Tax=Candidatus Blochmannia RepID=RBFA_BLOPB Length = 119 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 77/112 (68%), Gaps = 1/112 (0%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R QR+A E+ K++++ILQ +I D R+G+ T+SGV++S+DL A ++VTF+N + + + Sbjct: 8 RTQRIANEIHKKVSIILQHKIDDIRIGI-PTISGVQVSKDLKNANIFVTFINKEGPEEID 66 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + LQ AS FIR LL M +R+ P L F YD+SL+EG ++ +L+++ K Sbjct: 67 TAVMILQRASRFIRFLLANTMCIRVAPILFFKYDSSLIEGAKVCSLISTTEK 118 >UniRef50_Q609C1 Ribosome-binding factor A n=1 Tax=Methylococcus capsulatus RepID=RBFA_METCA Length = 119 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/118 (47%), Positives = 80/118 (67%), Gaps = 3/118 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R RV+ +MQ+EIA L+ I P LGM+T VS V++SRDLA AKV+VTFL + Sbjct: 1 MPREFSRSDRVSAQMQREIAEFLRTGIDAPELGMVT-VSDVDVSRDLAVAKVFVTFLGAR 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 E +A +K L E + +R +LG+ MR+RI+PE+ F YD+SL G+ M ++ S+ K Sbjct: 60 LE--TRAAVKRLGEFAPQLRQVLGRRMRMRIIPEIRFAYDDSLERGLHMDEVLRSLNK 115 >UniRef50_C8W4P3 Ribosome-binding factor A n=3 Tax=Clostridia RepID=C8W4P3_DESAS Length = 119 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 47/110 (42%), Positives = 80/110 (72%), Gaps = 3/110 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 RP+R+A+ ++KE++ ++ E+KDPR+G T+++ VE+SRDL++AK++V+ L ++E K Sbjct: 4 RPERLAESIKKEVSDMIINELKDPRIGF-TSITSVEVSRDLSFAKIFVSVLGTEEEQ--K 60 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 A ++AL A+GFIR+ +G+ +RLR VPEL F D S+ G ++ L+ V Sbjct: 61 ATVEALSRANGFIRAEIGRRIRLRHVPELAFISDQSIAHGTKIMKLLQDV 110 >UniRef50_Q5X1C4 Ribosome-binding factor A n=6 Tax=Legionella RepID=RBFA_LEGPA Length = 123 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 13/133 (9%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+ F R R+A+ +Q+++ALI+ +EIKDPRL T+S V+++ DL +AK+Y T LN+ Sbjct: 1 MSNNFKRTDRIAEMIQRKLALIIPQEIKDPRLKGFVTISAVKVAADLGHAKIYFTVLNE- 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D+ V L A+ ++RS L +++ LR VP+L F YD S+ G R+S L+ D Sbjct: 60 DKSVVT---NILNGAASYLRSALARSITLRTVPQLHFIYDESIEYGQRLSRLI------D 110 Query: 121 EERRVNPDDSKED 133 E VNP DS D Sbjct: 111 E---VNPPDSSSD 120 >UniRef50_D0L0S5 Ribosome-binding factor A n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0S5_HALNC Length = 139 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 86/132 (65%), Gaps = 5/132 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + F R QRVA+++++EIA +L+ EI+ + ++T V+ E++RDL YAK++ + LN Sbjct: 1 MPQGFSRHQRVAEQIRREIADLLREEIRQAGISLLT-VTDCEVTRDLGYAKIFYSVLNSS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + +A L A+GF+R+ L MRLR VP LTF +D S+ GM+M L+++V K D Sbjct: 60 ERERAQAW---LDSAAGFLRTELAHRMRLRSVPRLTFQFDASIERGMQMDALISAVRKQD 116 Query: 121 EERRVNPDDSKE 132 +E V DD+ + Sbjct: 117 DE-HVQTDDADD 127 >UniRef50_Q1GXD5 Ribosome-binding factor A n=3 Tax=Betaproteobacteria RepID=RBFA_METFK Length = 125 Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 5/113 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R RVA+++Q+E+A +LQ E+KDPR+ M TV+ VE+S D+++AKVY T Sbjct: 1 MVKEFSRSDRVAEQIQRELADLLQFEVKDPRVSSMVTVTEVEVSGDMSHAKVYYTAPQGT 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 E K L++ +GF+RS L + + LR VP+L F YD S+ GMR++ L+ Sbjct: 61 PELQ-----KGLEKTAGFLRSQLARRLLLRTVPQLHFVYDASIDRGMRIAKLI 108 >UniRef50_P59411 Ribosome-binding factor A n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RBFA_BUCBP Length = 119 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 79/116 (68%), Gaps = 2/116 (1%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 ++ R +++ E++K+I+ I+ ++ DPRL ++ +VS V +SRD +YAK+YV+ LN+K+ Sbjct: 2 QKLNRSFKISNEIKKKISWIICYQLCDPRLFNILISVSSVNLSRDFSYAKIYVSILNNKN 61 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + K + LQ +S IR LL K + LRI+P L F +D+S V G +++NL+ +V+ Sbjct: 62 -ISFKEILTILQNSSKHIRYLLAKGIFLRIIPTLHFCHDSSYVNGTKITNLINNVL 116 >UniRef50_A0Q8F2 Ribosome-binding factor A n=18 Tax=Francisella RepID=RBFA_FRATN Length = 143 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 6/129 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA E GR QRVA E+QK I+L+L+ IKD +L T++ V++S+DL+YAK+Y T L + Sbjct: 1 MAAE-GRVQRVASELQKVISLLLRTRIKDAKLAS-ATITEVDLSKDLSYAKIYYTCLAIE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D + + KA +++ GF RS + K++ LRIVP L F YD SL GM+M + ++ D Sbjct: 59 DAEYID---KAFEKSKGFFRSSIAKSLSLRIVPNLKFIYDTSLDYGMQMEEKIQQALEAD 115 Query: 121 EERRVNPDD 129 + + DD Sbjct: 116 -SKIIKQDD 123 >UniRef50_Q1MZS3 Ribosome-binding factor A n=1 Tax=Bermanella marisrubri RepID=Q1MZS3_9GAMM Length = 129 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 83/125 (66%), Gaps = 5/125 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MAK++ R QR+ +++++E+A +LQ ++KDPRLG++T ++ V+++ DL YA +Y T + Sbjct: 1 MAKDYSRTQRLGEQIKRELAHMLQFDVKDPRLGIVT-LNAVKVASDLGYADIYFTVMKSG 59 Query: 59 --DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + D++ V + L + SGF+R+ L + +R RI P+ F YD +L G +++NL+ Sbjct: 60 MVEADDETVAETEQILNDMSGFLRTELSQILRTRITPQPRFHYDVALERGHKLTNLINQA 119 Query: 117 VKHDE 121 VK D+ Sbjct: 120 VKSDK 124 >UniRef50_A7BQM5 Ribosome-binding factor A n=1 Tax=Beggiatoa sp. PS RepID=A7BQM5_9GAMM Length = 122 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 12/131 (9%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 KEF R QR+ ++Q+E+A I++REI +P LGM+ TVS +++S DL YA+VY+T L ++ Sbjct: 2 KEFSRTQRLGVQIQRELADIIRREIVNPHLGML-TVSSIDLSPDLKYARVYMTVLG--EQ 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 VK I+ L + +G +R L + + R P L F +DNS+ E R+S L+ S+ Sbjct: 59 QGVKYTIQHLNQVAGRLRYHLSQRLTTRTTPRLKFVHDNSIEESSRLSALINSLA----- 113 Query: 123 RRVNPDDSKED 133 P+ +KED Sbjct: 114 ----PNRTKED 120 >UniRef50_B1I386 Ribosome-binding factor A n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I386_DESAP Length = 119 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/113 (46%), Positives = 83/113 (73%), Gaps = 6/113 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL-NDKDEDAV 65 RP+R+A+ ++KEI+ +L R++KDPRLG +T V+ VE+S DL YAKV+V+ L +++D+DA Sbjct: 7 RPERLAEVIKKEISDLL-RQMKDPRLGFVT-VTAVEVSSDLRYAKVFVSVLGSNEDQDA- 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +K L+ A GFIR+ LGK +RLR PE++F +D S+ EG R+ ++ + K Sbjct: 64 --SLKVLRGAQGFIRTELGKRIRLRYTPEVSFVHDPSIEEGTRIIQIIRDIGK 114 >UniRef50_Q3J9B7 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_NITOC Length = 127 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/120 (41%), Positives = 80/120 (66%), Gaps = 3/120 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M++EF R +RV + +Q+E+A + Q E+KDPR+ ++T VS V +S DL AK YVTFL K Sbjct: 1 MSQEFSRARRVGELLQRELARLFQEELKDPRVKLVT-VSHVRVSPDLRQAKAYVTFLG-K 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +ED + + L +A+GF++ L + + LR++P L F YD+S+ G R+S L+ V+ + Sbjct: 59 EED-TQEQLAVLNKAAGFLQHGLSQRVELRVIPRLQFVYDDSIERGRRLSALIDKAVQKE 117 >UniRef50_A6T0Y7 Ribosome-binding factor A n=3 Tax=Betaproteobacteria RepID=RBFA_JANMA Length = 128 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 74/108 (68%), Gaps = 2/108 (1%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 GR RVA ++Q++++ I+ E+KDPR+GM+T ++ V+++ D A+AKV+ T L+DK +D + Sbjct: 10 GRGLRVADQIQRDLSEIIAFELKDPRVGMIT-ITEVQVTPDYAHAKVFFTMLSDKKDD-I 67 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 K + L ASG+IR LG+ + + +PEL F +D S G+ MS L+ Sbjct: 68 KNTVSGLTAASGYIRGQLGRRLTIHTLPELHFVHDTSTARGIEMSKLI 115 >UniRef50_A4BAM6 Ribosome-binding factor A n=2 Tax=Gammaproteobacteria RepID=A4BAM6_9GAMM Length = 137 Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 82/130 (63%), Gaps = 8/130 (6%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA R +++ ++QK++++I+QRE+KDPR+GM+T ++ V++S DL+YA VY T + Sbjct: 1 MASNSSRIRKIGDQIQKDLSVIIQREVKDPRVGMVT-INDVKVSSDLSYADVYFTCMAFG 59 Query: 59 -----DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + E K K L A+GF+R+ L + ++LR++P+L F YD + G R+S L+ Sbjct: 60 PQSEAEAQEQERKEQEKLLNRAAGFMRTQLAQGLKLRVIPQLRFHYDVVIETGARVSQLI 119 Query: 114 TSVVKHDEER 123 + D++R Sbjct: 120 DEAREQDQKR 129 >UniRef50_C4Z5N8 Ribosome-binding factor A n=10 Tax=Firmicutes RepID=RBFA_EUBE2 Length = 130 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 2/132 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + R+ E+ KE++ I++ EIKDPR+ MT+V VE++ DL K Y++ L D Sbjct: 1 MRKNSVKNTRINGEVLKELSNIIRSEIKDPRINPMTSVVAVEVAPDLKTCKAYISVLGD- 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E + K I L+ A G+IR L + + LR PE+ F D S+ G+ MS L+ V +HD Sbjct: 60 -EKSQKDTITGLKSAEGYIRRQLARTVNLRNTPEIRFILDQSIEYGINMSKLIDEVTEHD 118 Query: 121 EERRVNPDDSKE 132 + V +D E Sbjct: 119 NKMHVEVEDETE 130 >UniRef50_A4XL69 Ribosome-binding factor A n=15 Tax=Firmicutes RepID=RBFA_CALS8 Length = 135 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 85/130 (65%), Gaps = 3/130 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +F R RVA+E++KEI+ I+Q E+KDPR+ + ++ V MS+DL +AKV+V+ DK+ Sbjct: 2 QFERADRVAEEIKKEISDIIQHELKDPRICAELISIVKVNMSKDLRHAKVFVSIF-DKNR 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDE 121 + + + +KAL+ A +IR + + + LR PE++F D+S+ G R+S ++ + + DE Sbjct: 61 ENITSTMKALENAKPYIRREISRRINLRFSPEISFELDDSIEYGARISQILNQLNIAKDE 120 Query: 122 ERRVNPDDSK 131 E + D+S+ Sbjct: 121 EEEKSQDESE 130 >UniRef50_Q2RJM4 Ribosome-binding factor A n=5 Tax=Bacteria RepID=RBFA_MOOTA Length = 122 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 3/112 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R QRVA+EM+KEIA I++ E+KDPRL + +V+GVE+S D YAKVYV+ D E+A Sbjct: 5 ARNQRVAEEMKKEIARIIRDEVKDPRLEAGLVSVTGVELSNDRHYAKVYVSIYGD--EEA 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 ++ L A+ FIR +G+ + LR PE+TF D S+ G ++ L+ V Sbjct: 63 RNQAMEGLARATSFIRREIGQRLSLRYTPEITFKLDVSIEHGDHINRLLARV 114 >UniRef50_B2A398 Ribosome-binding factor A n=9 Tax=Firmicutes RepID=RBFA_NATTJ Length = 131 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 77/107 (71%), Gaps = 3/107 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ +E++K I+ ILQRE+KDP +G +T V+ V++S DL +AKV+V+ L +K+ + Sbjct: 5 RKEKLQEELKKIISDILQREVKDPSVGFVT-VTSVDLSGDLRHAKVFVSILGEKENQ--Q 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 ++ L++A+GFIRS LGK +RLR VPE+ F +D S+ G ++ L+ Sbjct: 62 DSLRGLEKATGFIRSELGKRVRLRHVPEIVFKFDESIEHGDHINKLL 108 >UniRef50_Q31GK4 Ribosome-binding factor A n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RBFA_THICR Length = 121 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 69/103 (66%), Gaps = 4/103 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL--N 58 M +E RP RVA E++K + IL R+ KDPRL + ++ ++S+DL+ A VY T + N Sbjct: 1 MNEEVSRPTRVALEIRKTLMEILHRDTKDPRLEKVN-ITECKISKDLSIATVYFTIIGVN 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDN 101 +KD+ A A IKAL++A GF RS +GK M LRI PE+ FFYD Sbjct: 60 EKDQPAQDA-IKALEKAKGFFRSEIGKRMNLRITPEVRFFYDT 101 >UniRef50_A7X1Q2 Ribosome-binding factor A n=133 Tax=Bacillales RepID=RBFA_STAA1 Length = 116 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 78/115 (67%), Gaps = 5/115 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL-NDKDEDAV 65 R +RV ++M+KE+ I+ ++KDPR+G +T ++ V ++ DL+ AKV++T L NDK+ V Sbjct: 5 RAERVGEQMKKELMDIINNKVKDPRVGFIT-ITDVVLTNDLSQAKVFLTVLGNDKE---V 60 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + KAL +A GFI+S LG MRLRI+PEL + YD S+ G ++ ++ + K D Sbjct: 61 ENTFKALDKAKGFIKSELGSRMRLRIMPELMYEYDQSIEYGNKIERMIQDLHKQD 115 >UniRef50_C5S648 Ribosome-binding factor A n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S648_CHRVI Length = 127 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 79/119 (66%), Gaps = 4/119 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKD 61 +EF R +R+ EM++ +A++++ ++KDPRL +T V V ++RDLA+AKVY T F +D+D Sbjct: 4 REFDRTERIGAEMKRALAVLVRDQVKDPRLANIT-VHEVRVTRDLAHAKVYFTCFPSDED 62 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 A + + ++ +GF+R L + +RLR +P+L F YD S+ +G +S+L+ V D Sbjct: 63 TPAQERLLN--KQLAGFLRHALAQEVRLRAMPQLHFVYDESIAQGQHLSDLIEQAVAKD 119 >UniRef50_A4J5X1 Ribosome-binding factor A n=1 Tax=Desulfotomaculum reducens MI-1 RepID=RBFA_DESRM Length = 120 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 80/111 (72%), Gaps = 5/111 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 RP+RVA+ ++KE+A +++ +IKDPR+G + T++GVE++RDL++AK++++ + DA + Sbjct: 4 RPERVAEAIKKEVADLIRNDIKDPRIGFV-TITGVEVTRDLSFAKIFISVMGS---DAHR 59 Query: 67 A-GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + LQ+++G++RS +G+ ++LR PEL F D SL G R++ ++ + Sbjct: 60 QETLSILQKSAGYMRSEIGRRIKLRHAPELIFKLDTSLDHGTRIAEILHEI 110 >UniRef50_D1CFX0 Ribosome-binding factor A n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFX0_THET1 Length = 121 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 48/115 (41%), Positives = 80/115 (69%), Gaps = 3/115 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R ++VAQE+++ I+ +L +E++DPR+G +T V+ VE+S DL +A ++V+ L ++++ K Sbjct: 4 RTEQVAQEIKRHISELLVQEVRDPRIGFVT-VTAVEVSPDLEHATIHVSVLGSEEDE--K 60 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 +KAL+ ASGF+RS L K +RLR + EL F D S E +R+S L+ V+ D+ Sbjct: 61 ETMKALRRASGFLRSELAKRIRLRKMAELRFEPDRSAAEAIRISQLLNEVLPPDD 115 >UniRef50_A9KNW3 Ribosome-binding factor A n=23 Tax=Bacteria RepID=RBFA_CLOPH Length = 136 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 72/116 (62%), Gaps = 2/116 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + R+ QE+QKE+++++ RE+KDPR+ MT++ VE++ DL AKVY++ L Sbjct: 1 MRKNSIKNTRINQEVQKELSMLISRELKDPRINPMTSIVAVEVAPDLKTAKVYISVLG-- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 DE + K + L+ A+ F+R L + + LR PEL F D S+ G+ MS L+ V Sbjct: 59 DELSQKNTLAGLKSAAPFLRGQLARGINLRNTPELLFVVDQSIEYGVSMSKLINEV 114 >UniRef50_D1VSB2 Ribosome-binding factor A n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSB2_9FIRM Length = 118 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 77/110 (70%), Gaps = 2/110 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R ++++E+++ + I+Q +IKDPR+ +T++S VE++RDL++AKVYV+ D D K Sbjct: 5 RINKISEEVKRCLMDIVQNKIKDPRIPTLTSISHVEVTRDLSFAKVYVSIFAD-DIKKQK 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 A ++ L+ A GFI+ L + ++LR++PEL F D+S+ +G++M L+ V Sbjct: 64 A-LQGLESAKGFIKKELAREVKLRVMPELIFINDDSIEKGLKMDKLINEV 112 >UniRef50_C2BHN3 Ribosome-binding factor A n=3 Tax=Anaerococcus RepID=C2BHN3_9FIRM Length = 127 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 77/119 (64%), Gaps = 6/119 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM--MTTVSGVEMSRDLAYAKVYVTFLND-KDED 63 R R++ E+++EI+ I+ ++ DPRL M +V+ VE++ DL+YA +Y++ L D K +D Sbjct: 5 RTARISSEVKREISKIIMDDLNDPRLSAEAMVSVTDVEVTNDLSYADIYISVLGDNKTKD 64 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 V ++AL +A G+I+ L+G+ MRLR +PE F +DNS+ G M L+ + D++ Sbjct: 65 GV---MEALNQAKGYIKILIGERMRLRSMPEFRFKFDNSIEHGAYMDKLIAETIAKDKK 120 >UniRef50_C7RGP1 Ribosome-binding factor A n=2 Tax=Anaerococcus RepID=C7RGP1_ANAPD Length = 128 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 8/118 (6%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM--MTTVSGVEMSRDLAYAKVYVTFLND--KDE 62 R +R++ E++KE++ IL+ ++ DPRL M T++ VE++ DL+YA YV+ L D E Sbjct: 5 RTERISSEVKKELSKILRDDLNDPRLSTEAMVTITDVEVTNDLSYADCYVSVLGDATNKE 64 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D ++AL++A G+I+ L+G+ MRLR +PE F DNS+ G M L+ + D Sbjct: 65 DV----LEALEQAKGYIKILIGERMRLRSMPEFRFKIDNSIEHGAYMDKLIAETIAKD 118 >UniRef50_Q18BH6 Ribosome-binding factor A n=6 Tax=Clostridium RepID=RBFA_CLOD6 Length = 126 Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 75/112 (66%), Gaps = 4/112 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + R +R+A+E++K ++ +L +KDPR+ M +V+ VE++ DL YA VYV+ L DE++ Sbjct: 4 YNRTRRIAEEIRKVVSTMLINGVKDPRITSMVSVTDVEVTNDLRYAYVYVSILGG-DEES 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 G+K+ A G+IR +GK ++LR +PE+ F D+S+ +GM M +L+ V Sbjct: 63 TLTGLKS---AGGYIRREVGKNIKLRYIPEIVFKLDDSIEKGMYMDSLIKRV 111 >UniRef50_B8FCY7 Ribosome-binding factor A n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=RBFA_DESAA Length = 123 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 12/131 (9%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K GR RVA +Q+E++ ++Q+ I DPRL T++GV+M++DL A+VY + +E Sbjct: 2 KSIGRQDRVAGRIQQELSALIQKRINDPRL-EWATITGVKMTKDLKIARVYYCVFGE-EE 59 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 +K G +A Q+A GFI+ L K + LR +PEL FF+D S G ++ +++ Sbjct: 60 KKIKVG-EAFQQAHGFIKRELAKKLGLRYMPELEFFFDESFDYGRKIESIL--------- 109 Query: 123 RRVNPDDSKED 133 R + P DS E+ Sbjct: 110 REIGPLDSPEE 120 >UniRef50_A6TRK6 Ribosome-binding factor A n=2 Tax=Alkaliphilus RepID=RBFA_ALKMQ Length = 138 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 83/128 (64%), Gaps = 2/128 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + R R+A+E++K I+ +++ +++DPR+ MT++ V ++RDL +A +Y++ L D+ E Sbjct: 6 YPRVNRLAEEIKKIISHMIRNDLRDPRIAKMTSIIEVNVTRDLRFATIYISVLGDQQEK- 64 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + I+ L+++SGFIR +G+ + R PEL F D S+ G+ M ++++ V + D + + Sbjct: 65 -EETIEGLKKSSGFIRKEVGRQITARFTPELIFKLDESIERGVYMYDVISKVTQKDMDEK 123 Query: 125 VNPDDSKE 132 N D+ ++ Sbjct: 124 KNSDEKRD 131 >UniRef50_C7RU80 Ribosome-binding factor A n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RU80_9PROT Length = 136 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 77/114 (67%), Gaps = 5/114 (4%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE-D 63 F R R+A+++++E+A +++ E++DPR+GM++ ++ V++S D A+AKV+ + L ++ D Sbjct: 7 FARRDRIAEQIRRELAELIRTELRDPRVGMIS-LTEVQVSADYAHAKVFFSTLAGSEQLD 65 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 AV AG LQ A GF+R LGK + + PEL F +D SL G ++S L++ V Sbjct: 66 AVYAG---LQHAGGFLRRELGKRISIHATPELHFVFDASLEHGAQLSKLISEAV 116 >UniRef50_B9KZ59 Ribosome-binding factor A n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RBFA_THERP Length = 129 Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 3/110 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+A+ ++ EIA I+QRE++DPRLG ++ V+ VEMS DL +AKV+V+ +E + Sbjct: 5 RQARLAEFLRDEIAAIIQRELRDPRLGFVS-VTRVEMSPDLRHAKVFVSIYGSHEEQ--E 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 A ++ALQ A+GFIR L+ + R +PEL F D SL +++ L+ + Sbjct: 62 AALEALQGAAGFIRRLIAPHLHTRHIPELHFKLDRSLEHAEQVARLLRQI 111 >UniRef50_B8JFY8 Ribosome-binding factor A n=4 Tax=Anaeromyxobacter RepID=RBFA_ANAD2 Length = 139 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 RP RVA+E + E++ IL R +KDPR+ TV+G +MS DL A VYV+ DE K Sbjct: 6 RPARVAEEFRHELSAILARGLKDPRITGFVTVTGSKMSPDLKEATVYVSIHG--DERVRK 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 LQ A+GF++ + +A+RLR P L F YD S+ G R+ L+ Sbjct: 64 DTFAGLQAAAGFLQREVSRALRLRNTPHLRFVYDESVARGDRIERLL 110 >UniRef50_A5WBS6 Ribosome-binding factor A n=19 Tax=Moraxellaceae RepID=RBFA_PSYWF Length = 140 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 5/127 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV- 65 R QR+ ++Q+E+A++++ ++ DPRL T+S V++S DL YA VYVT + + DA+ Sbjct: 4 RLQRLGDQIQRELAVLIRDDVNDPRLTGFVTISSVKVSSDLGYADVYVTIMEPELNDAMS 63 Query: 66 ----KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + +K L +A+GF+R+ L +++ R P L F YD G M +L+ V E Sbjct: 64 KHSHEESLKVLNKAAGFLRTELSHSLKTRTTPRLRFHYDEVTARGNYMMDLINKAVTKTE 123 Query: 122 ERRVNPD 128 + + D Sbjct: 124 QTSADDD 130 >UniRef50_C5RLI4 Ribosome-binding factor A n=2 Tax=Clostridium RepID=C5RLI4_CLOCL Length = 127 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 77/116 (66%), Gaps = 4/116 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKDEDAV 65 R +++ +EM+K+I+ +++ ++DPRL M +V+ V++++DL YAKVYV+ F +D ++D Sbjct: 5 RSEKINEEMKKQISDVIRNRVRDPRLAPMISVTSVDVTKDLKYAKVYVSIFGSDTEKD-- 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 +K L+ +SGFIR + + LR PEL F D S+ GM + L+ S+ ++++ Sbjct: 63 -ESLKILKNSSGFIRREVASKINLRSTPELLFNLDTSIEYGMHIDRLIHSIKENED 117 >UniRef50_B5YHT9 Ribosome-binding factor A n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RBFA_THEYD Length = 118 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 4/118 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + R QR+ +++E+A I+ +IKDPRLG +T V+ VE+S DL AKV+++ L +D Sbjct: 4 YKRAQRLKVLLKEEVAEIILHKIKDPRLGFIT-VTDVELSDDLRIAKVFISVLKTEDR-- 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + ++ L +A GF+RS + K +R++I+P F +D S+ G R+ L+ + K EE Sbjct: 61 -QLTLQILNDAKGFVRSEIAKRLRIKIIPTFEFLFDESIDRGFRIDQLLKEIKKTSEE 117 >UniRef50_C1A8N9 Ribosome-binding factor A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RBFA_GEMAT Length = 146 Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 4/114 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL-NDKDE 62 E RP RVA+ +++E+A L KDPR+ TV+ VE++RDL +A V+V+ + +D D+ Sbjct: 3 EVRRPDRVAEAIREEVATFLSEGAKDPRIRAFVTVTAVEVTRDLRHATVFVSLMGDDADK 62 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + AG+ ++ + +RS LGK++RLR PE+ F D S+ R+ +L+ + Sbjct: 63 KSTTAGLASV---ASHLRSQLGKSLRLRSAPEIHFRTDESVARASRIEHLLAKI 113 >UniRef50_Q3BRP6 Ribosome-binding factor A n=19 Tax=Xanthomonadaceae RepID=RBFA_XANC5 Length = 130 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 73/111 (65%), Gaps = 4/111 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K F R RV+ ++++++ I+ ++D L ++ VS VE+SRDLA+AKV+VT L + Sbjct: 4 KSFHRTDRVSAQVRRDLGTIVHAAVRDHGLPSVS-VSDVEISRDLAHAKVFVTALQ---Q 59 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + +K L+E +G +R+ L +AM+LR VPEL F YD+S+ G R+ NL+ Sbjct: 60 ERSAEAVKGLKEIAGQLRTQLARAMKLRHVPELHFHYDDSVDRGERIDNLL 110 >UniRef50_A4IMD9 Ribosome-binding factor A n=50 Tax=Firmicutes RepID=RBFA_GEOTN Length = 128 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 74/114 (64%), Gaps = 3/114 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV ++M+KE++ I+ R++KDPR+G +T V+ V ++ DL AKVY++ D ++ + Sbjct: 4 RATRVGEQMKKELSDIIGRKLKDPRIGFVT-VTDVRVTGDLQQAKVYISVFGD--DEQRE 60 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +KAL++A GFIRS +G+ +RLR PE+ F D ++ G R+ L+ + D Sbjct: 61 NTLKALEKAKGFIRSEIGQRIRLRKTPEILFEIDETIEYGSRIERLIRQISDED 114 >UniRef50_C2KV11 Ribosome-binding factor A n=1 Tax=Oribacterium sinus F0268 RepID=C2KV11_9FIRM Length = 138 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + QR +++++ ++L+++ E+KD R+ V+GV+++ DL Y KV+V+ L ++E + Sbjct: 7 KNQRRNEDVRRCLSLLIREEVKDSRVSPFCDVTGVDLTPDLQYCKVFVSCLGSEEE--LG 64 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 I+ L+ A GF+R L ++ LR PEL F D+S+ G RM L++ V K D+ER V Sbjct: 65 KTIEGLKAAGGFLRRELAGSLNLRHTPELQFIADHSVEYGSRMDALISQVSKEDKERAV 123 >UniRef50_B5YEH6 Ribosome-binding factor A n=2 Tax=Dictyoglomus RepID=RBFA_DICT6 Length = 120 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 74/116 (63%), Gaps = 2/116 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R++ +++EI+ IL R +KDPR+ ++ V+MS+DL YA +YV+ ++E K Sbjct: 4 RQERLSALIREEISEILLRRVKDPRISSFLVITEVKMSKDLRYAHIYVSVYGSEEEK--K 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 ++ L+ A GFIRS LGK +R+R VPE+ F D+SL +G R+ + + DE+ Sbjct: 62 QTMQGLESAKGFIRSELGKDLRIRFVPEIFFELDDSLEKGDRILRKLKELGLEDEQ 117 >UniRef50_B6BVJ9 Ribosome-binding factor A n=1 Tax=beta proteobacterium KB13 RepID=B6BVJ9_9PROT Length = 113 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 77/118 (65%), Gaps = 6/118 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R ++ Q+++KEIA ILQ EI+ P L + T++ +E+S+DL +AK+Y F++ + Sbjct: 1 MAKDYPRSNQIGQQIKKEIAEILQYEIQHPTL-VNVTITDLELSKDLRHAKIY--FISKQ 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D+ ++ KAL+ + FIR L K M R +P L F YD+S+ R++ L++S K Sbjct: 58 DQIELE---KALKRSMSFIRQSLSKRMTTRGIPNLEFIYDHSIDHNDRITELLSSAFK 112 >UniRef50_B6J6B2 Ribosome-binding factor A n=6 Tax=Coxiella burnetii RepID=RBFA_COXB1 Length = 119 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 12/126 (9%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R QRVA + +++A +L++E++D RL ++ ++ V +S DL AKV+ + L +++E V+ Sbjct: 4 RQQRVADLIHQQLAELLKKEVRDSRLSKIS-LTAVSISPDLKQAKVFYSLLENQNEKEVQ 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 KAL +A+G++R LL +A LR VP+L F YD S+ R+S L+ ER + Sbjct: 63 ---KALNKATGYLRHLLAQATVLRYVPKLEFVYDESIERAHRISLLI--------ERALK 111 Query: 127 PDDSKE 132 DDS E Sbjct: 112 KDDSDE 117 >UniRef50_Q0VSS0 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_ALCBS Length = 137 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 2/126 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 F R RVA ++Q+E++ +LQ E+KDPR+ + T+ V +SRDL+YA+VY T L +E A Sbjct: 10 FNRTDRVADQIQRELSRLLQFEMKDPRVNL-ATIQDVTVSRDLSYAEVYFTLLGQGEE-A 67 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + L +ASGF+RS L + + R P+L F YD + +S L+ D E R Sbjct: 68 GAEAEEVLTKASGFLRSSLAQGLNTRTTPKLRFHYDMTPERAAHLSQLIDEARAEDRELR 127 Query: 125 VNPDDS 130 D++ Sbjct: 128 PEDDET 133 >UniRef50_A9AV50 Ribosome-binding factor A n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AV50_HERA2 Length = 126 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 7/127 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK R ++VA+E++ ++ +Q EI+DPRLG +T ++ V +S DL +A + V+ + D Sbjct: 1 MAKN-KRVEQVAEEIKTILSNAIQFEIQDPRLGFVT-LTSVNVSPDLYHANINVSVMGD- 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + A K + L A GF+R LG+ M+LR VPEL F D ++ M L V D Sbjct: 58 -DTARKDSLATLDRAKGFLRRELGQQMKLRAVPELHFHLDVTIDTRQYMDTLFNQV---D 113 Query: 121 EERRVNP 127 EERRVNP Sbjct: 114 EERRVNP 120 >UniRef50_Q044B6 Ribosome-binding factor A n=58 Tax=Lactobacillales RepID=RBFA_LACGA Length = 123 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV E+ +E+ IL+++I+DPRL +T ++ VE + DL+YA +Y + L + D K Sbjct: 4 RIGRVEGEILRELTKILRKDIRDPRLSDIT-ITAVECTNDLSYATIYYSLLTE-DPAKEK 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 + L +A G +R LLG+ + + VPEL F D S+ G ++ NL+ V K D+ER Sbjct: 62 EVAEGLDKAKGMMRHLLGQTLTVYKVPELIFKRDTSVAYGSKIDNLINQVKKQDQER 118 >UniRef50_Q2LWT9 Ribosome-binding factor A n=2 Tax=Syntrophobacterales RepID=RBFA_SYNAS Length = 123 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 3/118 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 +F R RVA ++ EIA IL R I+DPR+ +T V+GV++S DL A+++ F+ ++ Sbjct: 3 QFKRADRVADLVKMEIADILLRRIRDPRVSRLT-VTGVKVSDDLRTARIF--FVEMGEDS 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 ++ LQ+A GFIR LGK ++LR VP+L F D+S G R+ L+ + + +E Sbjct: 60 CHPETLEGLQKAGGFIRKELGKRLKLRYVPDLIFKPDSSFAYGSRIDQLINEIHREEE 117 >UniRef50_D1C376 Ribosome-binding factor A n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C376_SPHTD Length = 135 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 3/93 (3%) Query: 11 VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIK 70 +A ++ EI+ ILQRE+KDPRLG+ +++ VE+S DL YAKVYV+ L E+ +A + Sbjct: 9 LADFLRDEISEILQREMKDPRLGL-ASITRVELSPDLRYAKVYVSVLGS--EEDREATMA 65 Query: 71 ALQEASGFIRSLLGKAMRLRIVPELTFFYDNSL 103 AL A+GF+R LL MR+R VPE+ F D S+ Sbjct: 66 ALTGAAGFVRHLLKPRMRVRHVPEIRFRLDRSM 98 >UniRef50_A0LE17 Ribosome-binding factor A n=1 Tax=Magnetococcus sp. MC-1 RepID=RBFA_MAGSM Length = 123 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 4/111 (3%) Query: 7 RPQRVAQEMQKEIALILQR-EIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RV ++KE+A +L R EIKDPRLG + V +S DL+YAKVY T + D+ V Sbjct: 4 RTERVGNAIRKEVASMLTRGEIKDPRLGGFVNIQEVRVSPDLSYAKVYYTVFGESDQAGV 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 A Q ASGF+R+++ K ++LR PEL F D+ R+ L+ + Sbjct: 64 A---DAWQRASGFLRNVIAKRLKLRHAPELRFELDHVADYSKRIDELLNGL 111 >UniRef50_B4E7L2 Ribosome-binding factor A n=21 Tax=Burkholderiales RepID=RBFA_BURCJ Length = 132 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 73/116 (62%), Gaps = 8/116 (6%) Query: 1 MAKEFGRPQR---VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL 57 M+++ P R +A ++Q++++ ++ RE+KDPR+G++T + VE++ D A+AKVY T L Sbjct: 1 MSRKRTSPNRNVQIADQIQRDLSELIMREVKDPRIGIVT-IQSVELTPDYAHAKVYFTAL 59 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 D D + +AL ASG + +LL K + + VP L F YD ++ + + MS L+ Sbjct: 60 T-GDPDKTQ---EALNHASGHLHNLLFKRLHIHTVPTLHFHYDQTIEKAVEMSRLI 111 >UniRef50_D1Y7J4 Ribosome-binding factor A n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7J4_9BACT Length = 131 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 4/93 (4%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 R+ ++Q+EI+LIL RE++D +L + V+ VE S+DL YAKVY T L ++ + Sbjct: 8 RINSQLQREISLILSREVRDEKLAEVI-VTSVECSKDLKYAKVYYTTLREEGRAEIA--- 63 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNS 102 K L++ SG++RS LG+ + R VPELTF +D+S Sbjct: 64 KLLEKVSGYVRSSLGRVLSYRTVPELTFRFDDS 96 >UniRef50_A3MJW5 Ribosome-binding factor A n=41 Tax=Burkholderiales RepID=RBFA_BURM7 Length = 122 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 8/116 (6%) Query: 1 MAKEFGRPQR---VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL 57 M+K+ P R +A ++Q++++ ++ RE+KDPR+G++T + VE++ D A+AKVY T L Sbjct: 1 MSKKRSSPNRNVQIADQIQRDLSELIMREVKDPRIGIVT-IQSVELTPDYAHAKVYFTAL 59 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 D +A L A+G + +LL K + + VP L F YD ++ + + MS L+ Sbjct: 60 TGTPADTQEA----LNHAAGHLHNLLFKRLHIHTVPTLHFHYDQTIEKAVAMSRLI 111 >UniRef50_UPI000196CD5A hypothetical protein CATMIT_02506 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CD5A Length = 109 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 6/107 (5%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 ++ + KE++LIL+ E+KDP L M TV+ V S D++ AKVYVTF+ ++ + G+ Sbjct: 8 KMNHYIMKELSLILRDEVKDPALRM-CTVTSVSCSNDMSVAKVYVTFMKNQGK-----GL 61 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 +AL GFIRS L + +++R PEL F D SL G R+ L+ ++ Sbjct: 62 QALDRCKGFIRSQLARRLKIRKCPELIFKVDESLEYGNRIEELIKNL 108 >UniRef50_Q3AB99 Ribosome-binding factor A n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RBFA_CARHZ Length = 125 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 71/112 (63%), Gaps = 3/112 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + +R AQ +++ +A I+ RE+KDPRLG ++ V+ V+++RDL+ AK+Y++ +++ K Sbjct: 8 KHERTAQAIKEAVAAIISREVKDPRLGFVS-VTKVDLARDLSQAKIYISVYGSEEDK--K 64 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 AL A GFI+ L +RLRI+PEL F D S+ G R+ ++ + K Sbjct: 65 NSFIALNSAKGFIKGELASRVRLRIMPELYFVEDPSIEYGARIMEILEGLKK 116 >UniRef50_A5EWY8 Ribosome-binding factor A n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RBFA_DICNV Length = 122 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R +R+ ++M++++A L + P +++ + V ++RDL++AKVYVT + D Sbjct: 1 MAHGVDRTRRIGEQMRRDLAQALVDIVHHPHASLLS-FTAVHLTRDLSFAKVYVTHVLDN 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E+ + + L +G R L K + +R VPEL F+YD S+ G RM L+T +VK Sbjct: 60 EEERSEL-VAELNAKAGQFRHYLAKNLSIRKVPELQFYYDQSVEYGARMEQLLTHLVKDS 118 Query: 121 EER 123 E + Sbjct: 119 EHK 121 >UniRef50_Q1K0G2 Ribosome-binding factor A n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0G2_DESAC Length = 119 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 74/117 (63%), Gaps = 4/117 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RVA+++ KEI+ I+ R ++DPR+G +T ++ V++S DL +AK++ T + + + DA K Sbjct: 5 RTYRVAEQIHKEISDIMLRGLRDPRVGFVT-ITSVDISSDLRHAKIFFTVMGE-EADAEK 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDEE 122 + L A F+R LGK M+LR VP+L F YD S+ G + L+ + HD++ Sbjct: 63 TQ-QGLDSAVPFLRRELGKRMKLRHVPDLVFKYDTSIAYGSHIEELLKEAGITHDDD 118 >UniRef50_D1BAC0 Ribosome-binding factor A n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1BAC0_THEAS Length = 137 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 4/110 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ +E +EI+L+LQ +KD R M ++GV S+DL+ AKVY T L+ + V+ Sbjct: 5 RIERLNKEFLREISLLLQGRVKDDR-AKMAILTGVSCSKDLSVAKVYFTVLDRSKVEEVR 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 G L+ ASG IR +LG+ MRLR +PE F YD++ R+ ++ S+ Sbjct: 64 LG---LEGASGLIRGMLGREMRLRKIPEFRFIYDDTEDRAGRVDAILDSI 110 >UniRef50_A5FQR5 Ribosome-binding factor A n=5 Tax=Dehalococcoides RepID=RBFA_DEHSB Length = 118 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 73/117 (62%), Gaps = 4/117 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL-NDKDEDAV 65 R +++ Q + +I+ +LQ+EI+DPRL + +V+ V++S D+ +A VYV+ L D+ +D + Sbjct: 4 RIKKLNQLFRADISALLQKEIRDPRLDTLLSVNEVDISEDMRHANVYVSHLAGDEHKDEI 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A AL A+GF R+ + K +R +P F +D ++ G+R++ L+ V+ H E Sbjct: 64 LA---ALNAAAGFFRTEIAKKTDIRYMPVFHFVWDITIERGVRLNTLIDQVIHHQPE 117 >UniRef50_B9M1G1 Ribosome-binding factor A n=8 Tax=Desulfuromonadales RepID=RBFA_GEOSF Length = 123 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 77/124 (62%), Gaps = 5/124 (4%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 F R ++VA+ + + ++ +L + +KDPR+G +T ++GV+++ D+ A +Y T + +E Sbjct: 2 FKRSEKVAEAVHELVSELLVKGLKDPRIGFVT-ITGVKVTDDMHLATIYFTVIGSDEEK- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV--VKHDEE 122 KA + L A GFIR +GK+ R+R VP++ F YD S+ G R+ +++ + +HD+ Sbjct: 60 -KATEQGLNSARGFIRKEMGKSFRMRYVPDIVFKYDASVEYGSRIESILKEIGSPEHDDN 118 Query: 123 RRVN 126 + N Sbjct: 119 DKEN 122 >UniRef50_C8X0G5 Ribosome-binding factor A n=3 Tax=Desulfovibrionales RepID=C8X0G5_DESRD Length = 120 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 3/97 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R QR+ + +EI +L E KDPRL + T+SGV M+R+L A+V T +D++ + Sbjct: 8 RAQRMGDTIMREIGHLLVEEAKDPRL-QLVTISGVRMNRNLQVAEVLFTHPEGRDKE--Q 64 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSL 103 I AL+ ASGF+R+ LGK +RLR VP+L F +D L Sbjct: 65 EIITALESASGFLRTALGKRLRLRFVPQLRFTWDTFL 101 >UniRef50_B9E1K3 Ribosome-binding factor A n=35 Tax=Clostridium RepID=RBFA_CLOK1 Length = 121 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 74/120 (61%), Gaps = 7/120 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKDEDAV 65 R R+ +EM++EI+ I++ ++KDPRL M +V+ V++++D YAKV+V+ + DK +D Sbjct: 5 RSGRINEEMKREISNIIRNDMKDPRLSAMVSVTKVDVTKDQKYAKVFVSIYGEDKSKDDT 64 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV---KHDEE 122 + L+ + FIR +G ++LR PE+ DN++ GM ++ L+ + KHD E Sbjct: 65 ---FQVLKSSESFIRREVGHRVKLRNTPEIIIEMDNTIEYGMHINELLHKIKENEKHDNE 121 >UniRef50_A1KUJ5 Ribosome-binding factor A n=28 Tax=Neisseriaceae RepID=RBFA_NEIMF Length = 123 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 4/112 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + R RV +++ +E+A +++ +KDPR G +T V+ VE++RD ++A V+ T LN +DA Sbjct: 8 YARQDRVKEQIMRELAELVRTGLKDPRAGFIT-VNEVEVTRDYSHATVFYTILN---QDA 63 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + + L+ A G +RS L K ++L PEL F YD SL G+ +S L+ V Sbjct: 64 REITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESLERGLNLSALIDQV 115 >UniRef50_UPI0000E87C6E ribosome-binding factor A n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C6E Length = 111 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R R+ Q+++KE+A +LQ+E+KDP L +T + V++S L +AKV+ Sbjct: 1 MAKDYPRSDRIRQQIKKELANLLQKEVKDPSLNQITILD-VDVSPCLKHAKVFFV----S 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 E+A + +K L + F+RS L K M R +P+L F YD S+ E +++S L+ + Sbjct: 56 QEEASEEVMKGLARSMPFLRSQLAKRMTTRGIPKLHFVYDKSIDESIKISKLLDGI 111 >UniRef50_A1HSB5 Ribosome-binding factor A n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSB5_9FIRM Length = 117 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 75/116 (64%), Gaps = 6/116 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ + +++E++ I+ E+KDPR+G +T V+ VE+S DL YAK++++ + +E K Sbjct: 5 RVEKIQEFIKQEVSKIILTELKDPRIGFVT-VTRVEVSGDLRYAKIFLSLMGSDEE---K 60 Query: 67 AGIKA-LQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 AG A L A G+IR+ +GK + +R VPEL+ D SL R+ L+ +KH+E Sbjct: 61 AGTWAGLHRALGYIRTEIGKHLGIRHVPELSLHLDESLQYSARIQELLNK-IKHEE 115 >UniRef50_Q0AYI7 Ribosome-binding factor A n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RBFA_SYNWW Length = 122 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 73/111 (65%), Gaps = 3/111 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMT-TVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +R++ E+ + ++ I+Q EIKDPR+ +++ +++S D ++A+V ++ L D E Sbjct: 5 RQERMSVEIMRVLSQIIQEEIKDPRIEFKNLSITRIDLSNDYSHARVNISILGD--EIQR 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + +KALQ+A G+IRS L + +++R PEL F D S+ G+R+S+L+ + Sbjct: 63 EEAMKALQKAKGYIRSALAQQLKVRHAPELEFRLDRSIEHGIRISSLLEEI 113 >UniRef50_A9ITX2 Ribosome-binding factor A n=5 Tax=Bordetella RepID=RBFA_BORPD Length = 136 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 5/108 (4%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 GR R+A ++QK++A ++QRE+ R G++T +SGVE+S D A+AKVY T L + DA Sbjct: 11 GRNLRLADQIQKDLAGLIQRELDMSRAGLIT-LSGVELSADYAHAKVYFTVLG-AEPDAA 68 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 A L E +G++ S L K + + VP L F +D + G+ MS L+ Sbjct: 69 AA---LLNEKAGWLHSQLYKLLHIHTVPTLRFVHDAQIARGIEMSALI 113 >UniRef50_A6NTY2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTY2_9BACE Length = 129 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 68/103 (66%), Gaps = 4/103 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ +E+Q+E++ ++ R +KDPR+ + +++ V+ + DL YAK++V+ L+ D + V Sbjct: 5 RIGRINEEIQRELSGLI-RTVKDPRVHGLVSITAVDTTTDLRYAKIHVSVLDKSDVNEV- 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRM 109 +K L+ A+G++R LG A+ LR PEL F D+S+ +G + Sbjct: 63 --VKGLKSAAGYLRRELGAALSLRYTPELIFEKDDSMAQGAHI 103 >UniRef50_B2S4C7 Ribosome-binding factor A n=4 Tax=Treponema RepID=RBFA_TREPS Length = 126 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 68/105 (64%), Gaps = 3/105 (2%) Query: 7 RPQRVAQEMQKEIA-LILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++ + ++ EIA LI+ +IKDPR+ +V+ V++S + A+VYV+ K + Sbjct: 8 RVRKLGEHIRAEIAQLIMLGKIKDPRVSPFLSVNWVDVSGGMVCARVYVSSFMGKYK--T 65 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMS 110 K G++ L+ A+GFIRS+L K +RLR P L+F YD S+ +G +S Sbjct: 66 KQGVQGLESAAGFIRSVLAKKLRLRQCPRLSFVYDESVRDGFSLS 110 >UniRef50_Q74CT2 Ribosome-binding factor A n=1 Tax=Geobacter sulfurreducens RepID=RBFA_GEOSL Length = 118 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 F R ++VA+ + + ++ ++ + +KDPR+G +T ++GV+++ D+ A +Y T + D DE Sbjct: 2 FNRSEKVAEAIHELVSGLIVKGMKDPRIGFIT-ITGVKVTDDIRQATIYYTVMGD-DEAR 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 V + L A+GF+R +GK +RL+ PEL F YD S+ G R+ L+ + Sbjct: 60 VSTA-RGLASATGFLRREIGKQLRLKFAPELHFKYDQSIEYGNRIDQLLKEI 110 >UniRef50_C8NBH2 Ribosome-binding factor A n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBH2_9GAMM Length = 128 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 76/119 (63%), Gaps = 4/119 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF-LND 59 M K R +R+ ++M++++A+ + + + P +++ ++ V ++RDL++AKVYVT +ND Sbjct: 1 MPKGQDRTRRIGEQMRRDLAVAVPQILDHPHASLLS-ITAVRVTRDLSFAKVYVTHVIND 59 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 DE + ++AL +G +R L + + +R +PEL F YD+S+ G RM +L+ +VK Sbjct: 60 ADER--QTLLRALNAHAGQLRHALAQKLSIRKMPELHFVYDDSVEYGARMDHLLHDLVK 116 >UniRef50_C6C0D1 Ribosome-binding factor A n=2 Tax=Desulfovibrio RepID=C6C0D1_DESAD Length = 117 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 3/99 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R ++ ++ +EIA +L EI DPRL M++ +SGV M++D A+V T DK++ + Sbjct: 8 RSVKMGDQIMREIATMLIEEIGDPRLEMVS-ISGVRMNKDNKIAEVMFTMAGDKEK--IA 64 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 A +KAL +A G++RS L K +R+R +PEL F +DN L E Sbjct: 65 AAVKALDKAKGYMRSKLSKRIRVRQIPELRFVHDNFLEE 103 >UniRef50_C1TMK9 Ribosome-binding factor A n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMK9_9BACT Length = 146 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 4/115 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +RV +E+Q+EI+ +L+ +KD V+GV+ ++DL AKVY T ++ +D +V Sbjct: 23 RIERVNKELQREISRLLEFSVKDEN-AKRAVVTGVDCAKDLKSAKVYFTTISPEDRRSVS 81 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 +K ++ F+RS L + +R+R VPEL F YD S G + L+ VV H+E Sbjct: 82 ESLKKVR---TFLRSSLAQTLRIRTVPELRFIYDTSGEYGRSIDRLLDMVVTHEE 133 >UniRef50_D2UCR3 Probable ribosome-binding factor a protein n=1 Tax=Xanthomonas albilineans RepID=D2UCR3_XANAL Length = 136 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 73/112 (65%), Gaps = 6/112 (5%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKD 61 K F R RVA ++++++ I+ ++D L ++ VS VE++RD+A+AKV+VT + ++ Sbjct: 4 KSFRRTDRVAAQIRRDLGTIVHAAVRDHGLPSVS-VSDVEVTRDMAHAKVFVTALMPERS 62 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 +AVK L+E + +R+ L +AM+LR VPEL F YD+S+ G R+ L+ Sbjct: 63 SEAVKG----LKELAPQLRTELARAMKLRHVPELHFHYDDSVDRGERIDTLL 110 >UniRef50_Q1DAM4 Ribosome-binding factor A n=3 Tax=Cystobacterineae RepID=RBFA_MYXXD Length = 119 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 70/111 (63%), Gaps = 4/111 (3%) Query: 7 RPQRVAQEMQKEIALILQRE-IKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 RP+RV QE+Q I +L R ++DPR+G +T ++GV++S DL A+V+ + + ++ E A Sbjct: 6 RPERVGQEIQAAIGDLLTRGMLRDPRIGYIT-ITGVKVSPDLRVARVFYSMMGNEQERAD 64 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 K L+ A GF+R + A+ LR+ PE+ F +D S+ EG ++ L+ V Sbjct: 65 TQ--KGLEAAKGFVRREVTSAVNLRVSPEIFFSFDESVGEGDKIDRLLREV 113 >UniRef50_C9RKT5 Ribosome-binding factor A n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKT5_FIBSS Length = 117 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 73/116 (62%), Gaps = 4/116 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL-NDKDEDAV 65 R R+ ++ ++EI+ ++Q+ +KDPR+ + +++ V+++ DL+YAK V+ + +DK++ Sbjct: 4 RTDRLGEQFREEISKLIQKGLKDPRVSTLASITRVDITEDLSYAKALVSVMGSDKEKRDT 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 G L ++GFIR +LGKA+++ VPEL F D +L M + ++ + + E Sbjct: 64 LVG---LNNSAGFIRGVLGKALKIFKVPELKFVLDENLEHAMHIEEILAELKQKGE 116 >UniRef50_C0QHM3 Ribosome-binding factor A n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=RBFA_DESAH Length = 119 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 71/119 (59%), Gaps = 3/119 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K + R +RVA +Q+ ++ +++++++DPR+ ++T +S V ++ DL A VY + D E Sbjct: 2 KPYPRSERVAARIQEILSDLIKKKVQDPRIELVT-ISSVRLTSDLRIAYVYFSVFGD--E 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 V+ + L+ + GFI+ + + LR +PEL F +D S G M L+ SV+K D+ Sbjct: 59 ARVEEATQGLKSSHGFIKRHVASQLGLRYMPELKFIHDQSFDRGTHMDQLLKSVLKGDD 117 >UniRef50_Q8DVP8 Ribosome-binding factor A n=5 Tax=Lactobacillales RepID=RBFA_STRMU Length = 116 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 71/114 (62%), Gaps = 2/114 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +RV E+++E+ ILQ++++DPR+ T++ V+MS DL+ AKVY T ++D D K Sbjct: 5 RIERVGMEIKREVNEILQKKVRDPRV-QGVTITDVQMSGDLSLAKVYYTIMSDLASDNQK 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 I L++A G I+ LGK + + +P+LTF D S+ G ++ ++ + K + Sbjct: 64 VQI-GLEKAKGTIKRELGKNLTMYKIPDLTFIKDESIEYGNKIDQMLRDLEKRN 116 >UniRef50_B1IA81 Ribosome-binding factor A n=30 Tax=Streptococcus RepID=RBFA_STRPI Length = 116 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 75/119 (63%), Gaps = 3/119 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA F R RV E+++E+ ILQ++++DPR+ T++ V+M DL+ AKVY T L++ Sbjct: 1 MANHF-RTDRVGMEIKREVNEILQKKVRDPRV-QGVTITDVQMLGDLSVAKVYYTILSNL 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D K I L++A+G I+ LG+ ++L +P+LTF D S+ G ++ ++ ++ K+ Sbjct: 59 ASDNQKVQI-GLEKATGTIKRELGRNLKLYKIPDLTFVKDESIEYGNKIDEMLRNLDKN 116 >UniRef50_B5Y926 Ribosome-binding factor A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=RBFA_COPPD Length = 137 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 75/127 (59%), Gaps = 7/127 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ Q +++E++ IL ++ D RL +T ++ VE+S D Y KVY + + K+ + + Sbjct: 5 RKERLQQAIKQELSKILLEDMNDERLKFVT-ITDVELSDDQKYLKVYFSTMPGKNSEQI- 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 +++L+ G++ + + +RLR PE+ F DNS+ G+RM L+ + K DE V Sbjct: 63 --LQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDE---VK 117 Query: 127 PDDSKED 133 D+S ED Sbjct: 118 EDESHED 124 >UniRef50_D1BM61 Ribosome-binding factor A n=8 Tax=Veillonellaceae RepID=D1BM61_VEIPT Length = 118 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 77/117 (65%), Gaps = 6/117 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKDEDAV 65 R +++ + +++E++ +L R +KDPR+G TT++ V ++ DL A +YV+ F +DK++ Sbjct: 5 RVRKLQEFIKQEVSQMLMRGLKDPRIGF-TTITDVHVTGDLREATIYVSLFGSDKEK--- 60 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + + AL+ A+G IR+ LGK ++LR +P +TF D SL M + +L+ +K DEE Sbjct: 61 QDTLIALKHAAGHIRTELGKVLKLRHIPSITFDKDTSLDYSMHIESLLNE-IKKDEE 116 >UniRef50_B2GBN8 Ribosome-binding factor A n=86 Tax=Lactobacillales RepID=RBFA_LACF3 Length = 120 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 3/119 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+F R +R+AQ++Q+E+ IL + ++DPR+ +T V+GV+++ DL A +Y T L+ Sbjct: 4 KQF-RVERLAQQIQREVDDILLKRVRDPRVNGVT-VTGVDVTGDLQQATIYYTILSKLAS 61 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 DA K L +A+G +RS LG + + PE+ F D S+ G R+ L+ + K++E Sbjct: 62 DAEKTQT-GLDKATGLVRSELGSRLNIFKAPEIKFVRDPSIEYGSRIDELLNELHKNNE 119 >UniRef50_UPI00016C0EBD ribosome-binding factor A n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EBD Length = 116 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 5/109 (4%) Query: 10 RVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 RV +E+QKE+A I++ + IKD R+ +M +V+ V+ + DL AK++++ L D +D V Sbjct: 8 RVNEEIQKEVAEIIRGDSIKDARMKDIMVSVTAVDTTTDLKNAKIFISVLQDNKKDDV-- 65 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + L +S FIR L + + LR PE++F DNS+ G++M+ ++ V Sbjct: 66 -LDVLNGSSKFIRKELARRINLRNTPEISFKLDNSIAYGIKMAKIIHEV 113 >UniRef50_Q0RDS6 Ribosome-binding factor A n=44 Tax=Actinomycetales RepID=RBFA_FRAAA Length = 203 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 3/114 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++A +++ +A L+R +KDPRLGM+T V+ V ++ DL A V+ T D EDA + Sbjct: 6 RARKLAVRIREVVASALERGVKDPRLGMVT-VTEVRVTPDLVDATVFYTVYGD--EDARR 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 A +AL+ A G +RS +G+A +++ P LTF +D + + +L++ + D Sbjct: 63 ASAEALESARGLLRSQVGRATGVKVTPTLTFVHDRLPDDAKHLEDLISVARERD 116 >UniRef50_UPI0001C31DB9 ribosome-binding factor A n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31DB9 Length = 121 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 70/105 (66%), Gaps = 3/105 (2%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +RV + ++ ++ + +++KDPR+G +T V+ V S DL +A+VYV+ L D++ A Sbjct: 2 RRVDEAVRAVLSDAITQDLKDPRVGFVT-VTAVRTSSDLRHARVYVSVLGDEETRA--EC 58 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + L+ A+G+++ L+ + +R++ PE+ F YD+S+ GMR++ ++ Sbjct: 59 LAGLRSATGYLQRLVAREVRMKYTPEIVFAYDDSIDRGMRITEIL 103 >UniRef50_B0SH19 Ribosome-binding factor A n=2 Tax=Leptospira biflexa serovar Patoc RepID=RBFA_LEPBA Length = 149 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Query: 7 RPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++ E+ ++I+ IL+ ++KDPR+ + + +E+S DL YAKVY T L + +E Sbjct: 5 RMKKLESEIIRQISTAILEGKVKDPRV-FLPSFHRIEISEDLKYAKVYFTALCNNNER-- 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD--EER 123 K + L +GF+ S +GK +RL P+ TF +DNS ++ + ++ L+ EE Sbjct: 62 KKLTQGLVSCAGFLSSFVGKNLRLHTNPKFTFVWDNSYIKSLEVNRLIDDSAPKTLFEEL 121 Query: 124 RVNPDDSKED 133 NP++ D Sbjct: 122 HPNPEEDDGD 131 >UniRef50_Q2J730 Ribosome-binding factor A n=14 Tax=Actinomycetales RepID=RBFA_FRASC Length = 168 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 3/115 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +R+A +++ +A L+R +KDPRLGM+T V+ V ++ DL A V+ T D E A Sbjct: 5 ARARRLAVRIREVVASTLERGVKDPRLGMVT-VTDVRLTPDLVDATVFYTVYGD--ETAR 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +A +AL+ A G +RS +G+A +++ P LTF +D + + L++ + D Sbjct: 62 QASAQALESARGLLRSQVGRATGVKVTPTLTFVHDRLPDDAQHLEKLISVARERD 116 >UniRef50_C0WBC7 Ribosome-binding factor A n=1 Tax=Acidaminococcus sp. D21 RepID=C0WBC7_9FIRM Length = 119 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 71/117 (60%), Gaps = 7/117 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ +++E++ +L RE+KDPR+ +T ++GVE++ +L+YAK+YV+ E + Sbjct: 5 RAEKLQALIKQELSNMLLREVKDPRVKFVT-ITGVEVTNELSYAKIYVSLYGS--EKQQE 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 K LQ G+ R+ + K ++LR+ P L+F D S M S + S++K +E+ Sbjct: 62 EAWKGLQSCLGYFRTEIAKRIKLRMAPHLSFHKDTS----MEYSAHIESILKEIKEK 114 >UniRef50_A4S0F7 Predicted protein (Fragment) n=3 Tax=Mamiellales RepID=A4S0F7_OSTLU Length = 171 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 15/123 (12%) Query: 7 RPQRVAQEMQKEIALILQREIK-------------DPRLGMMTTVSGVEMSRDLAYAKVY 53 R Q+V Q+M++EI+ ++Q + D L +M TV+ VE+S DL KVY Sbjct: 9 RVQKVQQQMRREISSMMQSDKNLRAMISPEERMGVDHMLSVMATVADVEVSNDLQVVKVY 68 Query: 54 VTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 V+ L D E IK ++ ++R +G+ M LR+ PE+ F YD+S G ++S L+ Sbjct: 69 VSILGD--ERGKNNAIKGMKRMEQYVRRKIGRRMSLRLTPEIRFIYDDSFERGQKVSALL 126 Query: 114 TSV 116 + Sbjct: 127 DEI 129 >UniRef50_B0CDK8 Ribosome-binding factor A n=10 Tax=Cyanobacteria RepID=RBFA_ACAM1 Length = 138 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 6/127 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RVA+ +++E++ +L IKD R+G M +V+ V++S DL +AK++V+ ++A Sbjct: 6 RVSRVAELIKREVSQMLLHSIKDDRVGSGMISVTAVDLSGDLQHAKIFVSIYGT--DEAR 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + L+ A+G++R LG + LR PE+ F D S EG ++ +L+ K D ER+ Sbjct: 64 AETMAGLESATGYVRKQLGHRIHLRRTPEVIFCEDRSFEEGNQVLSLLH---KLDHERQN 120 Query: 126 NPDDSKE 132 P S E Sbjct: 121 KPAASTE 127 >UniRef50_A5ZAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAJ4_9FIRM Length = 92 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%) Query: 35 MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPE 94 MT+V+GVE++ DL + KVY++ L D E+A + L+ A+GFIR L + + LR PE Sbjct: 1 MTSVTGVEVTPDLKFCKVYISVLGD--EEAKADTMAGLKSAAGFIRRELARTVNLRNTPE 58 Query: 95 LTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 L F D S+ GM+MS L+ V +++E Sbjct: 59 LKFVMDQSIEYGMKMSKLIDEVNGNNKE 86 >UniRef50_C7H6A6 Ribosome-binding factor A n=3 Tax=Ruminococcaceae RepID=C7H6A6_9FIRM Length = 136 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 74/125 (59%), Gaps = 5/125 (4%) Query: 10 RVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 R+AQ+M++E+ I+ R +KDPRL G + TV+ ++++ DL AKVYV+ + ED K Sbjct: 15 RLAQDMKREVIAIIGR-LKDPRLEGGLLTVTRLDVTPDLDVAKVYVSVMGR--EDGPKPA 71 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDEERRVNP 127 I+AL A+G +R+ + K M +R P F D+ ++ L+ ++ V D E P Sbjct: 72 IEALNRAAGHVRTEVSKKMHIRKAPRFIFVEDDGAAYAAHINELLRTLNVNGDAEETSQP 131 Query: 128 DDSKE 132 ++++E Sbjct: 132 EETEE 136 >UniRef50_C8QYE1 Ribosome-binding factor A n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYE1_9DELT Length = 135 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 4/116 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 RP R+A E+++E+A +L +++DPR+ +T + ++ DL+ A++Y + DE A Sbjct: 24 RPDRIADEIRQEVAALLVAKVQDPRVAKVTILRAT-VTPDLSQARLYYSVF---DEAAAA 79 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 K L A GFIRS L K + LR+VP L F +D SL E ++ + + +EE Sbjct: 80 EAAKGLASAKGFIRSSLAKNLALRVVPALIFEHDRSLAEQEKLERIFQEIKAGEEE 135 >UniRef50_Q6MD65 Ribosome-binding factor A n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RBFA_PARUW Length = 131 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ +++ I+ +++R++++P + + TV+ V++SRDL YAKV+++ + E A Sbjct: 5 RTDRLNSLLKEVISEVIRRDVRNPYVTELVTVTRVQISRDLRYAKVFISIIG--SEQAKV 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 I+AL A+GFI + + +R PEL F D+S+ + MR+ L+ + K E R+ + Sbjct: 63 ETIEALNSAAGFIAVNASQKVVMRYFPELNFKLDDSVDKHMRIEELLGKITKERESRQGD 122 Query: 127 PDDSKE 132 D E Sbjct: 123 NSDQLE 128 >UniRef50_D0LZ88 Ribosome-binding factor A n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ88_HALO1 Length = 150 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 10/121 (8%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRL--GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R QRV +++ + ++ RE+KDPR+ + +++ VE++RDL+ A +YV+F+ D A Sbjct: 6 RRQRVGNALREVLTELVARELKDPRVHAAGLVSINQVELNRDLSVAFIYVSFVGAPDARA 65 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD--NSLVEGMRMSNLVTSVVKHDEE 122 K + LQ A+GF+R + ++L+ PEL F D + E MR S+V+ DE Sbjct: 66 EKRALDGLQAAAGFLRGPAARRLKLQRAPELRFMDDPRGAFAEQMR------SLVRDDEV 119 Query: 123 R 123 R Sbjct: 120 R 120 >UniRef50_C1EAK4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EAK4_9CHLO Length = 252 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 15/120 (12%) Query: 7 RPQRVAQEMQKEIALILQREIK-------DPRLGM------MTTVSGVEMSRDLAYAKVY 53 R +V Q+M++EI+ ++Q + K + R+G+ M TV+ VE+S DL KV+ Sbjct: 55 RVAKVQQQMRREISNMMQTDKKLRDMVYPEERMGVDNVMSCMVTVADVEVSGDLQVVKVF 114 Query: 54 VTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 V+ L D E K I L++ G++R +GK + LR+ P++ F YD+S G R+S+L+ Sbjct: 115 VSILGD--ERGKKNAINGLKKMEGYVRRNIGKRVSLRLTPDIRFVYDDSFERGQRVSSLL 172 >UniRef50_A8PNL0 Ribosome-binding factor A n=1 Tax=Rickettsiella grylli RepID=A8PNL0_9COXI Length = 130 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIA-LILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K R R+A ++KE++ IL +EI D RL +T ++ V++SRDL+YA + T L+ Sbjct: 1 MQKNSNRVARIADLIKKELSNHILNKEIADSRLKFIT-ITSVKVSRDLSYADILFTQLSV 59 Query: 60 KDEDAVKA----GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 ++ D + ++ +++AS +R L + + L +P L FFYD+ L E R+ L+ Sbjct: 60 ENSDEKQKDKELAVQLVRKASARLRYALAQRLHLYKIPRLRFFYDDFLEESHRLHCLIEQ 119 Query: 116 VVKHDEERRV 125 + D+ +R Sbjct: 120 AMTKDKSKRT 129 >UniRef50_D2MPT2 Ribosome-binding factor A n=7 Tax=Bacteria RepID=D2MPT2_9FIRM Length = 117 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 3/110 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + +R+ ++K I+ I+Q +KDP +G +T ++ V +S D +YA VYV FL K+ + Sbjct: 6 KQKRLEGIIRKNISDIIQFNLKDPDVGFVT-ITDVAVSNDHSYAHVYVVFLGKKER--AQ 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 AG+KAL A GFIR L + + +R PEL F D + G + +++ + Sbjct: 63 AGLKALNRAKGFIRRELSQRLDIRRTPELIFQMDQAEERGRHIDDIIRKI 112 >UniRef50_B0S1E4 Ribosome-binding factor A n=2 Tax=Finegoldia magna RepID=RBFA_FINM2 Length = 121 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 73/121 (60%), Gaps = 5/121 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMT-TVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +R++ E++K I+ + +KDPR+ + +V+ V+++ DL++A VY+ + D ++ Sbjct: 5 RVRRISSEIKKVISSSIINSLKDPRIDKLNVSVTEVKVTNDLSFATVYIAVIGD--DEKK 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 K ++ L +A GF++ +G+ + LR VP+L F D + + M + NL+ S+ H+E Sbjct: 63 KQTLEGLNKAKGFLKKQIGENVDLRHVPQLIFKIDETSEQSMHIENLIKSI--HEENHNE 120 Query: 126 N 126 N Sbjct: 121 N 121 >UniRef50_B0MY67 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY67_9BACT Length = 114 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 65/102 (63%), Gaps = 5/102 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q++A+++Q+++A I Q+E + G++ TV+ V +S D +YAK+YV+ + Sbjct: 2 ETTRQQKIAKQIQRDMAEIFQKEGAEIVRGVLVTVTAVRVSPDFSYAKIYVSVFPFEQNA 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSL 103 AV A L++ + F+R LG+ +R L+ VPE+ FF D+SL Sbjct: 62 AVMA---TLEQHNWFLRRALGQRIRNQLKTVPEIQFFLDDSL 100 >UniRef50_D2QJ35 Ribosome-binding factor A n=2 Tax=Flexibacteraceae RepID=D2QJ35_9SPHI Length = 126 Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 5/115 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+V++++QK+++ I QR++ G TV+ V +S DL+ A+VY++FL K++ Sbjct: 2 ESKRQQKVSRQLQKDLSEIFQRDVPHLFNGAFITVTSVRISPDLSVARVYLSFLATKNKQ 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + ++ +QE +R LG +R LRIVPEL FF D++ +M L + + Sbjct: 62 LL---LETIQEKGKVLRQHLGDRVRHQLRIVPELHFFLDDTADYADKMDKLFSGL 113 >UniRef50_C4FWY3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWY3_9FIRM Length = 119 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 6/117 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK--DEDA 64 R RV QE+ +E+ IL RE KDPR+ +T ++ V+++ DL A ++ + L+DK Sbjct: 5 RVGRVRQEIMREVNRILLREAKDPRIEGVT-ITDVDLTGDLQQATIFYSTLSDKAGQRQK 63 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 +AG+KA+ +G +RS LGK ++L PE+ F D S+ G R+ L+ + + D+ Sbjct: 64 TEAGLKAV---TGLVRSELGKVLKLYKTPEIRFERDRSVDYGNRIDQLLNQIHQKDQ 117 >UniRef50_C9M6R1 Ribosome-binding factor A n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R1_9BACT Length = 130 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ ++ +EI+ IL ++KD + V+ V+ S+DL YAKVY T L + K Sbjct: 5 RMDRINSQLMREISRILMSDVKD-EVASQAIVTSVDCSKDLKYAKVYYTALTARR----K 59 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + +AL++ +GF+R LG +R R VP LTF +D + + +M L+ VV Sbjct: 60 SLAEALEKVAGFVRKTLGSRLRYRTVPLLTFVFDETEEKARQMDTLLDQVV 110 >UniRef50_B7GNA2 Ribosome-binding factor A n=10 Tax=Bifidobacteriaceae RepID=RBFA_BIFLI Length = 158 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R R+A +Q+ +A ++RE+ D RL +T V+ V ++ DL AKVY T L + Sbjct: 1 MAGTNPRAARIAALIQRVVASSIERELHDKRLASIT-VTEVRVTNDLQIAKVYWTQLGHE 59 Query: 61 --DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +E K +AL +A G +RSL+G LR+ P+L F +D E + +++ K Sbjct: 60 GHEEGERKRAQQALDQAKGHLRSLVGHKAGLRLTPQLQFVFDEVPGEAHEIEDILAVAKK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_A1TSK2 Ribosome-binding factor A n=15 Tax=Burkholderiales RepID=RBFA_ACIAC Length = 125 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 9/119 (7%) Query: 2 AKEFGRPQR---VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 AK+ P R VA ++Q+++ ++ RE+KDPR+GM+T + VE++ D A+AKV+ + L Sbjct: 3 AKKSSTPNRGFKVADQIQRDLTELI-RELKDPRIGMVT-LQAVEVTPDYAHAKVFFSVLV 60 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 D DA + AL +A+GF+R+ L K + + VP L F +D + M+ L+ V Sbjct: 61 -GDADATQ---DALNQAAGFLRNGLFKRLHIHTVPTLHFMFDRTTERASDMNALIARAV 115 >UniRef50_Q2S1N8 Ribosome-binding factor A n=1 Tax=Salinibacter ruber DSM 13855 RepID=RBFA_SALRD Length = 132 Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 4/106 (3%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +RVA+ +Q+E+A ILQRE D RL M T++ ++ DL+ A +Y + + D E+ +A Sbjct: 6 ERVAELVQREVARILQREYAD-RLQPMVTITRARVTGDLSIAYLYASVMGDTAEER-EAT 63 Query: 69 IKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNL 112 + L+ + IR+ L +R +R +PEL FF+D SL E RM NL Sbjct: 64 FRQLESLADEIRNQLASRIRHKVREIPELKFFHDESLEEAKRMENL 109 >UniRef50_Q6AJY5 Ribosome-binding factor A n=1 Tax=Desulfotalea psychrophila RepID=RBFA_DESPS Length = 140 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 6/127 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R RVA ++KE+A++L +I+DP+L + +S V + DL K+Y T Sbjct: 20 EVKRSTRVADAIRKELAVLLLEKIRDPKLQDVG-ISRVTATDDLTIVKIYYTIYGPHKH- 77 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 VKA KA A+GFIRS L + + +R P L F YD + + + N+ + K ER Sbjct: 78 -VKAVDKAFLAATGFIRSHLARTLNMRYTPNLQFCYDKTAEKVAEIENIFQEIAK---ER 133 Query: 124 RVNPDDS 130 + N ++S Sbjct: 134 QDNGENS 140 >UniRef50_C8WI33 Ribosome-binding factor A n=3 Tax=Coriobacteriaceae RepID=C8WI33_EGGLE Length = 145 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 5/109 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ ++V ++ ++ IA IL EI DPRL ++T ++G E+S D + V+ T D+ E Sbjct: 2 KQSSSNRKVNEQAREVIAGILLFEISDPRLELVT-ITGCEVSYDRSVCNVFYTTEPDRYE 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSN 111 D A Q+ASG IRSL+ + + RI PEL F D S+ E R+++ Sbjct: 61 DVAAA----FQKASGRIRSLMARKLSWRIAPELRFLLDKSVDEAERIAS 105 >UniRef50_D1R4P7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4P7_9CHLA Length = 132 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ +++ I ++++++++P + MTTV+ V++++DL +AKVYV+ + E + Sbjct: 5 RTDRLNSLLREVITEVIKKDVRNPYVSEMTTVTRVDITKDLRHAKVYVSIMGTGAEK--E 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 ++AL+ A+GFI + + +R PELTF D+S+ MR+ +L+ + R Sbjct: 63 DTLQALRSAAGFIAVNSSQKVVMRFFPELTFVLDDSVDRQMRIESLLREIEDEKSTRSEE 122 Query: 127 PDDSKE 132 DD+ E Sbjct: 123 SDDNDE 128 >UniRef50_Q0SM49 Ribosome-binding factor A n=18 Tax=Borrelia burgdorferi group RepID=RBFA_BORAP Length = 120 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 14/114 (12%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+F +AQE+ LI+ R IKDPR+ TV VE S+DL AKV++ + K+ Sbjct: 6 KKFKLESFIAQEIGN---LIVSRGIKDPRIHSFLTVVKVEFSKDLINAKVFIGSI--KEG 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTF---------FYDNSLVEGM 107 ++ +KAL A GFI+S + K +++R P+L F FY N ++EG+ Sbjct: 61 ASLDNAVKALNNAKGFIQSQIIKRIKVRSTPKLLFVKDDSLSKSFYVNKIIEGL 114 >UniRef50_C0GUB2 Ribosome-binding factor A n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUB2_9DELT Length = 109 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 5/99 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+A + +E+ I+ E +DPRL ++T ++GV M++DL+ A+V T + + K Sbjct: 8 RATRMADSIMRELGRIIVEEARDPRLNLVT-ITGVLMNKDLSIARVMYTHIQGPSPELEK 66 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 A L A GF+RS LG+ +++R VPEL F +D L E Sbjct: 67 A----LGSARGFLRSSLGQNLKMRYVPELRFEWDTYLQE 101 >UniRef50_A5UZQ3 Ribosome-binding factor A n=5 Tax=Chloroflexaceae RepID=RBFA_ROSS1 Length = 130 Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 7/128 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ E+Q+ + ++Q E+KDPR+G T V GVE++ DL A+V ++ + DE + Sbjct: 4 RTEQLGHEIQRILGEVIQYELKDPRVGFATVV-GVEVTADLQIARVRISVMGTPDER--R 60 Query: 67 AGIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + AL+ A GF+R L + + LR VPEL D S+ + + L+ EER Sbjct: 61 ETMAALERARGFLRRRLAEELNYLRFVPELRLILDTSVDYSLHIDELLRRAA---EERAD 117 Query: 126 NPDDSKED 133 +P ED Sbjct: 118 SPPQQPED 125 >UniRef50_A6GK84 Ribosome-binding factor A n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GK84_9DELT Length = 153 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 71/113 (62%), Gaps = 5/113 (4%) Query: 7 RPQRVAQEMQKEIA-LILQREIKDPRLGMMTTVS--GVEMSRDLAYAKVYVTFLNDKDED 63 R QRV + +++E+A ++L+ E++DPRL + VS GV +S DL+ A +YV L + Sbjct: 4 RRQRVEELLRREMAQMLLRGELRDPRLQPASAVSVTGVSVSPDLSVATIYVDVLTEALR- 62 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 +++ + AL+ G IR LG+ ++LR PEL F +D+S+ G R+ ++T + Sbjct: 63 -LESVLAALRAGGGAIRRKLGERVQLRRTPELRFHHDDSIERGNRVEAILTEL 114 >UniRef50_Q3ELJ3 Ribosome-binding factor A n=1 Tax=Bacillus thuringiensis serovar israelensis ATCC 35646 RepID=Q3ELJ3_BACTI Length = 84 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 3/78 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV ++M+KE+ I+ R+IKDPR+G + TV+ V++S DL KVY++ L D+++ + Sbjct: 4 RANRVGEQMKKELGDIISRKIKDPRIGFV-TVTDVQVSGDLQIGKVYISGLGDEEQKEIT 62 Query: 67 AGIKALQEASGFIRSLLG 84 K L +A GFIRS +G Sbjct: 63 --FKGLAKAKGFIRSEIG 78 >UniRef50_C8NZL4 Ribosome-binding factor A n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZL4_ERYRH Length = 111 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 68/112 (60%), Gaps = 4/112 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + +R+ +++E+A ++Q + DP L ++ ++ V+++ D ++A +YV+FL D + + Sbjct: 4 KKERIESIIKRELAPVIQNRLNDPSLKFVS-ITEVDVTNDFSFATIYVSFLEDSKK---Q 59 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 G+ AL +A G +RS + KA+ +R PEL F D S G ++ ++ S+ K Sbjct: 60 PGMDALNKAKGMLRSEVSKALSIRRTPELIFKLDESSEYGAKIDGILESLKK 111 >UniRef50_B4RC51 Ribosome-binding factor A n=2 Tax=Alphaproteobacteria RepID=RBFA_PHEZH Length = 145 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 4/95 (4%) Query: 19 IALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASG 77 + + + EI DP L G+ TV+ V +S DL +A V+V L + D V ++AL + Sbjct: 31 VEIFREEEINDPVLAGVSVTVTEVRVSPDLRHATVFVEPLGGEHADEV---VQALNRHAR 87 Query: 78 FIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNL 112 F+R LG+A+ LR PEL F +D S E RM+ L Sbjct: 88 FLRGHLGRAIELRFTPELKFLHDESFNEAARMAKL 122 >UniRef50_C5NYH6 Ribosome-binding factor A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYH6_9BACL Length = 119 Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 70/115 (60%), Gaps = 5/115 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-DKDEDAV 65 R R+A++++KEI +L ++K+ LG +T V+ V ++ D + AKV+ T L +++++ Sbjct: 5 RVNRLAEQIKKEITYVLATKVKNHDLGFVT-VTEVALTGDYSQAKVFYTVLGGEREKEKT 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K K ++ GF++S + K +++R PEL F YD + + + +L+ SV K + Sbjct: 64 KEAFKKIK---GFVKSEVAKKIKIRKFPELIFQYDTTAEYALHIESLIASVSKKE 115 >UniRef50_A5FV22 Ribosome-binding factor A n=4 Tax=Acetobacteraceae RepID=RBFA_ACICJ Length = 140 Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 11/124 (8%) Query: 7 RPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +RVA++++ +A + R E +DP L G+ TV+ V MS DL +A V+V+ L D D Sbjct: 20 RQRRVAEDLRHRLAELFARTEFRDPELAGVHITVAEVRMSPDLKHATVFVSRLGATDIDR 79 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT------SVVK 118 + AL+ + F+R +G +R++ VP+L F D++L E R++ L+ ++K Sbjct: 80 Y---LPALKRIAPFLRGEIGHGLRMKFVPDLHFQPDHALDEATRINELLHRPEVMRDLLK 136 Query: 119 HDEE 122 DEE Sbjct: 137 PDEE 140 >UniRef50_O65693 Probable ribosome-binding factor A, chloroplastic n=10 Tax=Embryophyta RepID=RBFA_ARATH Length = 215 Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 6/108 (5%) Query: 29 DPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKDEDAVKAGIKALQEASGFIRSLLGKAM 87 D L +TT+S VE+S DL KVYV+ F +D+ +D AG+K+ + ++RS LGK M Sbjct: 94 DRYLSSLTTISDVEVSNDLQVVKVYVSVFGDDRGKDVAIAGLKS---KAKYVRSELGKRM 150 Query: 88 RLRIVPELTFFYDNSLVEGMRMSNLVTSVV--KHDEERRVNPDDSKED 133 +LR+ PE+ F D ++ G R+ ++ + K E + P DS ED Sbjct: 151 KLRLTPEVRFIEDEAMERGSRVIAILDKIKAEKGSGEGKTEPSDSTED 198 >UniRef50_D0MI92 Ribosome-binding factor A n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI92_RHOM4 Length = 126 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 5/109 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R QRV +++E+A ILQ E D +L MTTV+ V+ +RDL+ AKVYV+ ++ + Sbjct: 6 RVQRVGSLLKRELADILQFEFGD-QLPPMTTVTDVQPTRDLSIAKVYVSIYGTPEQK--R 62 Query: 67 AGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLV 113 A + LQE + IR+ L + +R LR +PEL F D +L R+ L+ Sbjct: 63 AAFRRLQELTPQIRAALAQRIRYQLRFMPELRFVLDETLERAQRVEELL 111 >UniRef50_C6W5Y8 Ribosome-binding factor A n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5Y8_DYAFD Length = 127 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+V +++QK++ I Q++ + G T++ V ++ DL+ A+ Y++FL DK++ Sbjct: 2 ESKRQQKVGRQIQKDLGEIFQKDAQHLTHGSFVTITAVRVTPDLSIARAYLSFLPDKNKT 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + ++ ++E + FIR L + +R LRIVP L F+ D++ +M L +V Sbjct: 62 ML---LETIRENTRFIRQKLAERVRHQLRIVPHLQFYIDDTAEYAAKMDQLFADLV 114 >UniRef50_D2MK31 Ribosome-binding factor A n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MK31_9BACT Length = 117 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 3/85 (3%) Query: 18 EIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASG 77 E+A IL R+ KDPRL TV+ VEM+ DL A VYV+ L ++ E K L ASG Sbjct: 2 EVADILARKCKDPRL-RFVTVTDVEMNNDLRKAYVYVSLLGNQVETETVG--KILDNASG 58 Query: 78 FIRSLLGKAMRLRIVPELTFFYDNS 102 F+R LG+ + LR PE++F +D+ Sbjct: 59 FVRLELGRRLELRYTPEVSFRFDSG 83 >UniRef50_B3QZW6 Ribosome-binding factor A n=4 Tax=Candidatus Phytoplasma RepID=RBFA_PHYMT Length = 114 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 3/111 (2%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +++A ++KE+ALI+ I++ ++G + V+ V+++ DL++A VY LN++ E A Sbjct: 6 EKLASLIKKELALIINVSIRNNKIGFIN-VTEVKLTNDLSFANVYYVILNNQPEFLSLAA 64 Query: 69 IKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + +++ IR LL K +R +R +PEL F YD SL G + N++ + K Sbjct: 65 -EIIEKNKSTIRMLLAKKIRNIRKIPELVFIYDTSLEYGNHIDNILKGINK 114 >UniRef50_Q2JW85 Ribosome-binding factor A n=18 Tax=Cyanobacteria RepID=RBFA_SYNJA Length = 149 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RVA+ +++E++ IL EIKD R+G M ++ VE+S DL A+++V+ DE A Sbjct: 6 RVARVAELIKREVSQILLSEIKDDRVGAGMVSIVDVEVSNDLQNARIFVSIYG--DEAAQ 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + ++ L A+ F+R +G+ + LR VP + F D SL G R+ L+ + Sbjct: 64 QQTMEGLASATPFVRREIGQRLGLRRVPTVVFLQDRSLERGSRVLALLNQL 114 >UniRef50_C2BRN5 Ribosome-binding factor A n=3 Tax=Mobiluncus RepID=C2BRN5_9ACTO Length = 145 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 5/95 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKDEDAV 65 R ++VA + +A +L +IKDPRLG + T++ VE++ DL +AKVY T + +D + A Sbjct: 5 RREKVAANILTTVASMLAGKIKDPRLGFV-TITSVEVTGDLQHAKVYYTAYGSDTERTAS 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 A AL+ A G IRS +GK + R+ P L F D Sbjct: 64 GA---ALESAKGLIRSRVGKNLGTRLTPTLEFVSD 95 >UniRef50_B9KAB3 Ribosome-binding factor A n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KAB3_THENN Length = 132 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 4/104 (3%) Query: 14 EMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKAL 72 E+QK + LQ +++DPRL T S VE+S+D YA VYV+FL +E + ++ L Sbjct: 16 EIQKLLTEALQ-QLRDPRLKKEFVTFSRVELSKDKRYADVYVSFLGSPEER--REAVEIL 72 Query: 73 QEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 A GF R+ + K ++L + PE+ F+ D + +R+ L+ + Sbjct: 73 NRAKGFFRTYVAKNLKLYVAPEIRFYEDKGIEASVRVHQLLNQL 116 >UniRef50_A8ZZ63 Ribosome-binding factor A n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RBFA_DESOH Length = 129 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 3/111 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K F R R+ +Q+ ++ IL++ + DPRL M T++GV++SRDL A YV ++ D Sbjct: 2 KSFPRADRIGSSIQRGVSEILRKGLGDPRLDM-ATITGVKVSRDLGVA--YVYYVIPGDT 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 A + A GFI+ L ++++ +P++ F YD S G + ++ Sbjct: 59 AGRAAAAAGFKSAEGFIKRSLAGMLKMKYMPDIRFRYDESFAYGQSIDTVL 109 >UniRef50_B1LCH6 Ribosome-binding factor A n=8 Tax=Thermotogaceae RepID=RBFA_THESQ Length = 131 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 4/104 (3%) Query: 14 EMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKAL 72 E+QK + LQ +++DPRL T S VE+S+D YA VYV+FL +E K ++ L Sbjct: 13 EIQKLLMEALQ-QLRDPRLKKDFVTFSRVELSKDKRYADVYVSFLGTPEER--KETVEIL 69 Query: 73 QEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 A GF R+ + K +RL + PE+ F+ D + +++ L+ + Sbjct: 70 NRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVKVHQLLVQL 113 >UniRef50_C6XX51 Ribosome-binding factor A n=4 Tax=Sphingobacteriaceae RepID=C6XX51_PEDHD Length = 127 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 7/108 (6%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+ A +Q+E+A I QRE + T++ V +S DLA AKVY++FLN + Sbjct: 2 ESKRQQKFAGVIQEELAAIFQREGSAYLPNTLVTITKVRVSPDLAVAKVYLSFLNTSN-- 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYD--NSLVEGM 107 + + SG IR LG +R R+VP LTFF D N+ VE M Sbjct: 60 -TTLSVAEVNSHSGEIRYKLGARIRHQARVVPTLTFFVDDTNTYVEQM 106 >UniRef50_B2S1E6 Ribosome-binding factor A n=2 Tax=Borrelia RepID=RBFA_BORHD Length = 119 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 4/122 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIA-LILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M KE R ++ + +EI LIL + IKDPR+ TV VE+S DL AKV++ + Sbjct: 1 MEKEI-RKSKLESLLVQEIGNLILTKGIKDPRVHEFLTVVRVEISNDLINAKVFIGSI-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K+ ++ +KAL A GFI+ + K +R+R P+L+F D+++ + ++ ++ ++ Sbjct: 58 KEGASLDNAVKALNNAKGFIQGEIVKRIRVRNTPKLSFLRDDTISKAFYVNKIIENLSFS 117 Query: 120 DE 121 DE Sbjct: 118 DE 119 >UniRef50_Q1Q1G7 Similar to ribosome-binding factor A n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1G7_9BACT Length = 125 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 3/94 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+++ +++E++ I+ ++KDPRL +T V+ V++S DL KVYV+ L ++ E K Sbjct: 5 RAERLSEFIKQEVSKIILYKVKDPRLSFIT-VTEVDISADLKNVKVYVSVLGNELER--K 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 + L A GFI++ LG +R++ P L F D Sbjct: 62 NTMCGLDHAKGFIQTELGSCLRIKYTPHLKFCLD 95 >UniRef50_A5CXX7 Ribosome-binding factor A n=4 Tax=Bacteria RepID=RBFA_VESOH Length = 114 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 67/110 (60%), Gaps = 5/110 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ + +++E+ L+L+ IKDPRL M ++ V +SRDL+ AKV+ T + + D+ ++ Sbjct: 10 RVERINELIRRELTLLLRTSIKDPRLRDMI-ITDVLISRDLSSAKVFYTVIKE-DKKMIE 67 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 L +ASGF R L K + LR P L F +D++ G R+ L++ + Sbjct: 68 P---LLDKASGFFRIHLSKTIDLRHTPVLRFIFDSAPNTGARIEQLLSKL 114 >UniRef50_Q46HR0 Ribosome-binding factor A n=2 Tax=Prochlorococcus marinus RepID=RBFA_PROMT Length = 123 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 71/112 (63%), Gaps = 5/112 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVT-FLNDKDEDA 64 R +++A +++E++ +L I+D R+ M T++ VE+S DL +AK++++ F +K +D Sbjct: 6 RVEKLAALLKREVSELLVNGIRDERIHQAMITITSVEVSGDLQHAKIFISLFGEEKKKDE 65 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 V G L+EA GFIR+ L + +++R PEL F D + +G + +L+ ++ Sbjct: 66 VLVG---LEEAKGFIRAELAQRLQMRRSPELVFKIDKGMTKGPAVLDLLNAL 114 >UniRef50_C0EAK4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EAK4_9CLOT Length = 115 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 68/108 (62%), Gaps = 4/108 (3%) Query: 10 RVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 R+A+++++E++ +L R++KDPR+ G M + VE++ D ++AKVYV+ + + A K Sbjct: 8 RLAEDIKRELS-VLVRDLKDPRIKGKMLSFVRVEVTNDQSFAKVYVSSMEGME--AAKEA 64 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 ++ L+ ASGF++ L + +R P++ F D+S+ ++ L+ + Sbjct: 65 VEGLKSASGFVKRELSNTLHMRKCPDIKFIPDDSIEYSAHLNKLLLDI 112 >UniRef50_C0QZC0 Ribosome-binding factor A n=2 Tax=Brachyspira RepID=C0QZC0_BRAHW Length = 101 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%) Query: 25 REIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLL 83 REI+DPR+ + T++ V+ ++DL AKVY L + ++ V G L A G I S L Sbjct: 2 REIEDPRIKNNLVTITKVDTAKDLKNAKVYFVCLREDKQNEVLNG---LNSAKGVIFSYL 58 Query: 84 GKAMRLRIVPELTFFYDNSLVEGMRM 109 K + +R VP LTF YD +L+E ++ Sbjct: 59 KKQLTIRYVPNLTFHYDKNLIETNKV 84 >UniRef50_A4E6U6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U6_9ACTN Length = 136 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 66/108 (61%), Gaps = 5/108 (4%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +R+ +++++++ IL E+ DPRL ++T ++ VE++ D ++A+VYV+ D Sbjct: 8 RRLGEQLREKLGYILLFEVSDPRLDLVT-LTAVEVAVDRSFARVYVSC----DASRYDEV 62 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 ++AL A G IRSLL +++ R+ PEL F D S E R++ + +V Sbjct: 63 MEALASAKGRIRSLLARSLDWRVTPELDFRIDRSTDEAERITRALENV 110 >UniRef50_A9G882 Ribosome-binding factor A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RBFA_SORC5 Length = 124 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 3/95 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF-LNDKDEDAV 65 R RVA+ ++++++ +L R+++DPR+ + VS VE++ DL AKV+V +D A Sbjct: 7 RATRVAERLREDLSNLL-RDLRDPRIAGVL-VSRVEITDDLQSAKVHVRHEFGAEDAAAR 64 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 +A +K L+ ASG +R + + M LR+VP L FFYD Sbjct: 65 RALLKGLEAASGRLRRDVARTMGLRVVPTLRFFYD 99 >UniRef50_Q6MMS5 Ribosome-binding factor A n=1 Tax=Bdellovibrio bacteriovorus RepID=RBFA_BDEBA Length = 134 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 6/120 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV +E+Q IA L R K P G++T V+ V+M DL AKVYV+ L D E Sbjct: 9 RIARVEREIQATIAQFLIRGFKTPLPGLVT-VASVKMPADLRAAKVYVSILGD--EKQQD 65 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 + LQE + I++ +GK +++R P+LTF+ D++ + +++ ++ + + ER+ N Sbjct: 66 EALDLLQERAFEIQNYIGKELKMRYCPKLTFYLDHATEQVLKVEKILHEL---ELERKAN 122 >UniRef50_Q7V3G3 Ribosome-binding factor A n=7 Tax=Prochlorococcus marinus RepID=RBFA_PROMP Length = 132 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 74/127 (58%), Gaps = 7/127 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++ ++KEI LILQ ++++ L +S +E+S DL + K+Y+T E+A+ Sbjct: 6 RIAKISSLLKKEITLILQNDLENDLLRSNFINISKIELSGDLQFCKIYIT---STAEEAI 62 Query: 66 KAGI-KALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV--VKHDEE 122 + I + L A +IR LG+ + +R VPE+TF D L +G+ + L+ + KH+++ Sbjct: 63 RKEIVEELNLAKTYIRHTLGQRIEMRRVPEMTFKDDTVLEKGLSVLKLLAELKNKKHNQD 122 Query: 123 RRVNPDD 129 +V ++ Sbjct: 123 SKVEGNN 129 >UniRef50_B0MQX5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQX5_9FIRM Length = 126 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 74/125 (59%), Gaps = 9/125 (7%) Query: 10 RVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 R+A+++++EI+ + R+IKD + M VS E++ DL+Y KVY+T L + D K Sbjct: 8 RLAEDIKREISTAM-RDIKDGAVVKAMVGVSRCELTSDLSYCKVYITTL--EGGDTTKNV 64 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPD 128 + L++A GF + + + +++R +P+L F DNS+ +S +++ + K E PD Sbjct: 65 AEHLKKAEGFFKRRINERVKMRKLPQLIFVPDNSMDYYEHISEVISKLPKPAE-----PD 119 Query: 129 DSKED 133 D+ +D Sbjct: 120 DNGDD 124 >UniRef50_C7H128 MgpA protein n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H128_9FIRM Length = 458 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+A+E++K ++ +++DP L M ++ V++S D AKVY + D+D V Sbjct: 6 RKDRLAEEIKKIVSNAFLLKVRDPILKMAINITAVDVSPDGRNAKVYYVVFSGSDKDEVA 65 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSL 103 A +K ++ IR + + MR+R VP + F YD SL Sbjct: 66 AALKKVEP---LIRKEIAENMRVRYVPNICFAYDTSL 99 >UniRef50_Q1NKW1 Ribosome-binding factor A n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKW1_9DELT Length = 131 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 11 VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIK 70 VA E+++E+A +L ++KDPR+ +T + ++ DL A++Y + L+D+ AG Sbjct: 29 VADEIRQEVATLLLAKVKDPRVEQVTILKAT-VTADLRQARIYYSVLHDEAAADAAAG-- 85 Query: 71 ALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 L+ A FIR L K + LR+VP L F D SL + + L+ + Sbjct: 86 -LESARSFIRRSLAKNLVLRVVPALIFERDRSLADQQHLEQLLAEI 130 >UniRef50_C8W718 Ribosome-binding factor A n=5 Tax=Coriobacteriaceae RepID=C8W718_ATOPD Length = 136 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 7/108 (6%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 +F R R + +++++ IL EI DP L ++T ++ E+S D ++ +VYV+ D+ E Sbjct: 5 QFSR--RTNEVAREKLSWILLFEISDPDLQLVT-ITSCEVSVDKSFMRVYVSCEPDRYEK 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSN 111 + AL+ A G IRSLLG A+ R+ PEL F D + E R++ Sbjct: 62 V----LAALKRAKGRIRSLLGHALNWRVTPELDFKIDTTTDEAERIAQ 105 >UniRef50_B5RMZ6 Ribosome-binding factor A n=2 Tax=Borrelia RepID=B5RMZ6_BORDL Length = 129 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 12/114 (10%) Query: 7 RPQRVAQEMQKEIA-LILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R ++ + +EI LI+ R IKDPR+ TV VE++ DL KV+V + K+ ++ Sbjct: 16 RKSKLESLLVQEIGNLIVTRSIKDPRVHEFLTVVRVEIANDLINTKVFVGSI--KEGVSL 73 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTF---------FYDNSLVEGMRMS 110 IKAL A GFI+ L K +++R P+L F FY N ++E + S Sbjct: 74 DNAIKALNNAKGFIQRKLVKRIKVRNTPKLNFIRDDTISKAFYVNKIIENLNFS 127 >UniRef50_A1A0A3 Ribosome-binding factor A n=6 Tax=Bifidobacterium RepID=RBFA_BIFAA Length = 167 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R R+A +Q+ IA ++ ++ D RL +T ++ V ++ DL AKVY T L + Sbjct: 1 MAGTNPRAARIAALIQRVIASSMEAQLHDKRLANVT-ITEVRVTNDLQIAKVYWTQLGHE 59 Query: 61 --DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 ++ + +AL +A G +RSL+G LR+ P+L F +D E + +++ K Sbjct: 60 GHEQGERRRAQQALNQAKGRLRSLVGTKAGLRLTPQLEFIFDEVPGEAHEIEDILALAHK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_D0WDY7 Ribosome-binding factor A n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WDY7_9ACTN Length = 158 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 10/124 (8%) Query: 9 QRVAQEMQKEI-ALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 R E +EI A IL E+ DPRL + T++G E+S D +Y V+ T E+A A Sbjct: 7 NRKTNEQAREILANILLFEVSDPRL-RLVTITGCEVSYDRSYCNVFYTSDPGTYEEAA-A 64 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNP 127 G A A G IRSL+G + R+ PEL F D S+ E R++ + H+ R P Sbjct: 65 GFSA---ARGRIRSLMGARLTWRVTPELRFLLDPSVDEAERIAR----ALAHEASRIPVP 117 Query: 128 DDSK 131 +++ Sbjct: 118 SETE 121 >UniRef50_B0PH14 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PH14_9FIRM Length = 118 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 66/116 (56%), Gaps = 3/116 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R +++ +E+ I+ R +KDPR+ + ++ ++++RDL++ KVY++ ++ Sbjct: 5 RASRTEEDIHRELCDIM-RGLKDPRVSGLISIVKLDLARDLSHCKVYISSMDGIAAAKSA 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A L+ A GFI+ L ++LR +PE +F D+S+ ++ ++ + D+E Sbjct: 64 A--AGLRSAQGFIKRELNARLKLRKLPEFSFIADDSIAHSADIARILDGLHTQDQE 117 >UniRef50_A7IC07 Ribosome-binding factor A n=35 Tax=Rhizobiales RepID=RBFA_XANP2 Length = 151 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 5/108 (4%) Query: 10 RVAQEMQKEIALILQR-EIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 RV + ++ +A +LQR + DP L + TV V MS DL A YV L KD V Sbjct: 17 RVGELVRHALADVLQRGSVTDPVLAAHIITVPEVRMSPDLKIATCYVMPLGGKDITPV-- 74 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 IKAL + ++R +G+ M L+ VPEL F D S EG RM L+ S Sbjct: 75 -IKALAANARYLRLEVGRRMELKSVPELRFREDTSFDEGARMDALLRS 121 >UniRef50_B0VFC2 Putative ribosome-binding factor A (RbfA-like) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFC2_9BACT Length = 161 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 66/111 (59%), Gaps = 5/111 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND-KDEDAV 65 R R+ E++K + L +++ DP+L + ++ V +S+DL YAK+Y + N+ D + Sbjct: 5 RIPRLQAELKKLFNIALSQKLNDPKLAWVQ-ITDVVISKDLHYAKLYFSHYNNPASHDQI 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + + L ++SGF++ + A +R +PEL+F+YD++ ++ L+ S+ Sbjct: 64 R---ELLIKSSGFLKKQIAGAQIMRTIPELSFYYDDTEDRAAKVDTLLASL 111 >UniRef50_A4X4N9 Ribosome-binding factor A n=4 Tax=Actinomycetales RepID=RBFA_SALTO Length = 156 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 3/93 (3%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +R A+ +++ +A +++ +IKDPRLGM+T ++ ++ DL A V+ T L D A A Sbjct: 8 RRHAERVRELVASVVRSQIKDPRLGMIT-ITDARITADLRDATVFYTVLGDASAQASTA- 65 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDN 101 AL+ A G +RS +GKA+ LR P LTF D+ Sbjct: 66 -AALESAKGMVRSTVGKALGLRHSPTLTFVLDD 97 >UniRef50_B3QUN3 Ribosome-binding factor A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RBFA_CHLT3 Length = 125 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 67/109 (61%), Gaps = 6/109 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +RVA+ +Q+E++ I ++E+ PR G++TT+ GV+++ DL+ A+VYV+ L K+ A Sbjct: 4 RTERVAELIQRELSGIFEKEL--PRSGVLTTIVGVKITPDLSIARVYVSILGSKEMGA-- 59 Query: 67 AGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLV 113 + + +Q+ + R LL +R + +P L F+ D+ + ++ L+ Sbjct: 60 SVMAHIQKENKHFRKLLSSKIRHQFKRMPSLEFYQDDLFDQAAHINELI 108 >UniRef50_A2CCY5 Ribosome-binding factor A n=23 Tax=cellular organisms RepID=RBFA_PROM3 Length = 142 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 66/108 (61%), Gaps = 3/108 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RVA +++E + +L I+D R+ M +++ VE+S DL + K++V+ ++ + + Sbjct: 6 RVERVAALIRRETSELLIHGIRDERVHQGMVSITNVEVSGDLQHCKIFVSIYGEEIQRS- 64 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 ++ L+ ASGF+R LG+ +++R PE+ F D + +G + NL+ Sbjct: 65 -EVLEGLEAASGFLRGELGRRLQMRRAPEVHFHLDRGIEKGTSVLNLL 111 >UniRef50_C4XE44 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE44_MYCFE Length = 335 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 7/100 (7%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K +R +Q ++ +A I+ ++ + + + T+ E+S DL++ K+Y++F Sbjct: 11 MPKSINTLRRESQ-IRTLLAEIITNDLTNTNI-INPTLVDCELSGDLSHVKIYMSF---- 64 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 + K G++ALQ ASG+IR++L K++ R VPEL F+ D Sbjct: 65 -SENEKRGLEALQNASGYIRTILAKSLNWRKVPELHFYID 103 >UniRef50_Q04GM9 Ribosome-binding factor A n=2 Tax=Oenococcus oeni RepID=RBFA_OENOB Length = 121 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 2/108 (1%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV +Q+EI+ IL +E+ DPRL + T++G++M+ D + A VY T +D Sbjct: 8 ARLLRVEGTIQREISEILVKEVSDPRLKDV-TITGIDMTPDFSIAYVYWTIYSDLASSGE 66 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 KA LQ A G I+ L + M +P+L F D ++ G + L+ Sbjct: 67 KAD-AGLQAAKGLIKRQLARKMTTFKIPDLIFKRDTAIEYGDHIEQLI 113 >UniRef50_A0M6N1 Ribosome-binding factor A n=13 Tax=Bacteroidetes RepID=RBFA_GRAFK Length = 131 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 14/130 (10%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDP-RLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 E R +++ +QK++A ILQ +++ R G++ +VS V ++ DL+ AK YV+ K + Sbjct: 3 ETNRQKKIGGLLQKDLADILQNSLRESGRTGILISVSKVRVTTDLSIAKAYVSIFPSKHQ 62 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSL--VEGMRMSNLVTSVVK 118 + V IK + E I+ + + R LR +P+L+F+ D+SL ++G+ S +K Sbjct: 63 EEV---IKEINENKSQIKHEMAQRTRHQLRKMPDLSFYVDDSLEYIDGIEKS------IK 113 Query: 119 HDEERRVNPD 128 E+ NPD Sbjct: 114 GKEDPVANPD 123 >UniRef50_B8DW44 Ribosome-binding factor A n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DW44_BIFA0 Length = 217 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 3/118 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL--NDKDEDA 64 R R+A +Q+ IA ++ + D RL +T ++ V+++ DL AK+Y T L + +E Sbjct: 7 RAARIAALIQRVIASNMESTLHDKRLKNVT-ITDVKVTNDLQLAKIYWTTLSRDGHEEGE 65 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 K +AL +A G +R+++G LR+ P+L F +D E + ++++ K DEE Sbjct: 66 RKRAKEALNQAKGRLRTMVGAKAGLRLTPQLQFIFDEVPGEAHEIEDILSLARKRDEE 123 >UniRef50_Q4FNM8 Ribosome-binding factor A n=3 Tax=Candidatus Pelagibacter RepID=RBFA_PELUB Length = 122 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 10/120 (8%) Query: 1 MAKEFGRP-----QRVAQEMQKEIALILQR-EIKDPRLGMMT-TVSGVEMSRDLAYAKVY 53 MA G+P RV + +++ + +I R E K P L T TV+ V+MS+DL AK Y Sbjct: 1 MADRIGKPVSQRQLRVGEMIRQSLGMIFARNEAKVPNLETNTITVTEVKMSQDLKIAKAY 60 Query: 54 VTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 V L KD + V IK L+E S IR L K + ++ +P++ F D+S ++ NL+ Sbjct: 61 VLPLGGKDSELV---IKKLKECSFLIRKALSKKIIMKYLPKILFAKDDSFEYAEKIENLI 117 >UniRef50_A4QEZ1 Ribosome-binding factor A n=8 Tax=Actinomycetales RepID=RBFA_CORGB Length = 149 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 3/119 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF--LNDKDED 63 R R+A+ +Q +A ++R+IKD RL +T ++ V M+ DL AKV+ T + ++E Sbjct: 5 ARAARMAKRIQTIVASAIERDIKDRRLEFVT-ITDVTMTGDLHDAKVFYTVRGASIEEEP 63 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 ++A +AL A G +R ++G+ + +R P LT+ D M L+ K DEE Sbjct: 64 DLEAAAEALHRARGQLRKIVGQQLGVRFTPTLTYSIDTVPEASAHMEALLDRARKRDEE 122 >UniRef50_C6X0X9 Ribosome-binding factor A n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0X9_FLAB3 Length = 120 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 65/103 (63%), Gaps = 7/103 (6%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R ++VAQ +Q+++A + +++ D + + TVS V+++ DL+ AKVY++ Sbjct: 3 ESNRQRKVAQIIQQDLAELFRKQASDSKQNFLVTVSDVKITADLSIAKVYLSIF----PP 58 Query: 64 AVKAGI-KALQEASGFIRSLLGKAM--RLRIVPELTFFYDNSL 103 AV+A + K +++ + R+ +G+ M ++RI+P++ F+ D +L Sbjct: 59 AVRAAVMKEIEQNTSAYRNFIGQKMGKQVRIIPDVKFYLDTTL 101 >UniRef50_Q0AK66 Ribosome-binding factor A n=2 Tax=Hyphomonadaceae RepID=RBFA_MARMM Length = 141 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 4/97 (4%) Query: 19 IALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASG 77 + +I + E +DP L G M +V+ V S DL AKVYV L D + AG L + Sbjct: 28 VGIIAREEFRDPDLEGQMISVTEVRPSPDLRVAKVYVAPLGRGDSAKLAAG---LNRCAA 84 Query: 78 FIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT 114 F+R LG+ + ++ PEL F DNS + +L+ Sbjct: 85 FLRGRLGREIEMKFTPELHFHADNSFDTASHVDDLLN 121 >UniRef50_B5W1W9 Ribosome-binding factor A n=1 Tax=Arthrospira maxima CS-328 RepID=B5W1W9_SPIMA Length = 105 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 2/88 (2%) Query: 46 DLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 DL +AK++V+ E+A ++ ++ L+ A+G+IRS LGK +RLR PE+ F D SL Sbjct: 14 DLQHAKIFVSIYGT--EEARRSTMEGLRSATGYIRSHLGKHIRLRRTPEVVFLEDRSLER 71 Query: 106 GMRMSNLVTSVVKHDEERRVNPDDSKED 133 G ++ L+ + + D ++ED Sbjct: 72 GDKIIELLNQISHEHKNSDTAGDTTQED 99 >UniRef50_Q98PP7 Ribosome-binding factor A n=1 Tax=Mycoplasma pulmonis RepID=RBFA_MYCPU Length = 112 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 62/106 (58%), Gaps = 6/106 (5%) Query: 13 QEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKAL 72 Q++ I+ I+ E+++ + ++TTV G+++S DL++ VYVTF + K ++ L Sbjct: 11 QDILINISRIISEEVQNLK-DVLTTVVGIKLSSDLSHCNVYVTFSKNS-----KKNLERL 64 Query: 73 QEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +ASG+I+ L ++ R +P L F D++ + +++ ++ + K Sbjct: 65 NQASGYIKKQLSSILKWRKIPSLHFKIDDTFEKSLKIEQILEEIKK 110 >UniRef50_D0WR20 Ribosome-binding factor A n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WR20_9ACTO Length = 179 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RVA+ + + +A ++ +KDPRL ++T V+ V ++ DL +A V+ T D+ + ++ Sbjct: 5 RANRVAERIHEIVASLVTNRLKDPRLELVT-VTDVRVTGDLQHATVFYTAYGDQRK--LR 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 +AL A G IRS +G+ + LR+ P + F D +L E R + +H Sbjct: 62 DAGRALNRAKGNIRSHVGRQLGLRLTPTIEFTAD-ALPETARSLEDALAAARH 113 >UniRef50_C1SPK3 Ribosome-binding factor A n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPK3_9BACT Length = 96 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 58/95 (61%), Gaps = 4/95 (4%) Query: 22 ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRS 81 ++ +E+ DP++ + ++ +++++DL+ AKVY + N ++ ++ G L ++GFIR Sbjct: 3 VIIKEVNDPKIKDVV-LTKIDVTKDLSIAKVYFSTYNKSAKEGIERG---LNRSAGFIRH 58 Query: 82 LLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + K +RL+ VP L F YD+S G ++ L+ + Sbjct: 59 CILKGLRLKKVPTLRFIYDDSGDYGQKIDGLLKDI 93 >UniRef50_Q5NQ28 Ribosome-binding factor A n=3 Tax=Zymomonas mobilis RepID=RBFA_ZYMMO Length = 141 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 8/129 (6%) Query: 7 RPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 RP RV ++++ +A +L R EI L + ++S V M+ DL A V+V L +D Sbjct: 13 RPLRVGEQIRHVLAEMLMRGEIHGDTLDNLFVSISEVRMTPDLRIATVFVKSLGGASDDT 72 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 V I L + + F+++ + K +RL+ VP+L F D S +G R+ +L+ S H +R Sbjct: 73 V---IGILSKNASFLQAAIAKKIRLKYVPKLRFLADESFEQGSRIDSLLRS--PH-VQRD 126 Query: 125 VNPDDSKED 133 + +D +ED Sbjct: 127 LQENDDQED 135 >UniRef50_A6W7Z4 Ribosome-binding factor A n=14 Tax=Actinobacteria (class) RepID=RBFA_KINRD Length = 171 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 5/115 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++A ++ +A L++ +KDPRLG +T ++ ++ DL +A ++ T +E K Sbjct: 6 RARKLADRIKVIVADALEKRVKDPRLGFVT-ITDARVTNDLQHATLFYTVFGSDEE---K 61 Query: 67 AGIK-ALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 G AL+ A G +RS +GK +R+ P LTF D ++ +L+ + D Sbjct: 62 QGTALALESAKGVLRSEVGKRTGIRLTPTLTFTLDEVPETATQIQDLLKQAAEQD 116 >UniRef50_B1CB53 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CB53_9FIRM Length = 121 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 8/122 (6%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFL--NDKDED 63 R +RV + ++ E++L+++ E+ DPRL + +V V+ + DL YAKVYV+ + N+K E+ Sbjct: 4 RIERVNELIKNELSLLIELELNDPRLKEAIISVVRVKATPDLKYAKVYVSVMGENNKKEE 63 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDEE 122 I L +A GF+R + K + R PEL F DNSL M + ++ + +K DE Sbjct: 64 I----IGVLDKAKGFLRKSIAKVLNTRNTPELIFELDNSLDYAMHIDEVLAGLDIKDDEY 119 Query: 123 RR 124 R Sbjct: 120 DR 121 >UniRef50_A9BI93 Ribosome-binding factor A n=1 Tax=Petrotoga mobilis SJ95 RepID=RBFA_PETMO Length = 117 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 10/118 (8%) Query: 7 RPQRVAQEMQKEIALILQ--REIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R + + EM+K LI Q ++KDPRL ++ V +S+D +Y VYV+ L D+D D Sbjct: 5 RREMLESEMKK---LITQGFSQLKDPRLKDKFIDINMVRLSKDKSYLDVYVSSL-DEDID 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + I L A G R+L+ K +++ VPE+ F D + +R++ L+ + K++E Sbjct: 61 TI---INILNNAKGMFRTLIAKNIKMFKVPEVRFHKDEGIEASIRINKLIEKIEKNEE 115 >UniRef50_Q8RHJ7 Ribosome-binding factor A n=14 Tax=Fusobacterium RepID=RBFA_FUSNN Length = 120 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R + + +E+ + I+ +L E+K+P++ + +V+ V+++ DL +A Y + L D K Sbjct: 5 RLEGIGKEIMRVISKVLLEEVKNPKIKGLVSVTEVDVTEDLKFADTYFSILPPLKSDEKK 64 Query: 67 AG----IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 ++AL E GF+R + + + +R PE+ DNS+ ++++ L+ + Sbjct: 65 YDHEEILEALNEIKGFLRKRVAEEVDIRYTPEIRVKLDNSMENAIKITKLLNDL 118 >UniRef50_B9XFC2 Ribosome-binding factor A n=1 Tax=bacterium Ellin514 RepID=B9XFC2_9BACT Length = 125 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 3/123 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R QRV + +++EI +++REI G++T V+ V +S DL A V++ L + K Sbjct: 5 RLQRVRELLKREIGEVIRREIPVGESGLIT-VNEVGVSSDLHSATVFIGILGTDQQK--K 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 G L I+ L+G+A+ L+ P L F D S+ EG ++ ++ + K Sbjct: 62 KGFAQLNHHRKRIQGLVGQAVILKYTPTLRFVLDESIAEGNKVLQIIDELEKSGPNNETT 121 Query: 127 PDD 129 P++ Sbjct: 122 PEN 124 >UniRef50_UPI00016C38FF probable ribosome-binding factor A n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38FF Length = 163 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 67/114 (58%), Gaps = 7/114 (6%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 RV++ +++ A + EIKDPR+ +T V+ E+S DL +AKV+V+ + + E ++ + Sbjct: 8 RVSEVVRETAANAILFEIKDPRVKNVT-VTRAEVSADLQHAKVFVSVMGSEKEQSLT--M 64 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 L+ A+ ++++ + + R VP +TF D EG++ S + +++ + ER Sbjct: 65 HGLKSAAAYVQTKIADRLTSRYVPHVTFILD----EGVKKSIEIARIIREENER 114 >UniRef50_B8ZRT3 Ribosome-binding factor A n=7 Tax=Actinomycetales RepID=RBFA_MYCLB Length = 164 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA-- 64 R +R+A+ + +A ++ EIKDP L +T V V+++ DL A V+ T + EDA Sbjct: 6 RARRLAKRICTIVASAIEFEIKDPGLDGVTIVD-VKVTADLHDATVFYTVMGRTLEDAPD 64 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 A AL A G +RS +G +R P LTF D + RM L+ Sbjct: 65 YTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRDTTSDSVARMEELL 113 >UniRef50_C6HXK3 Ribosome-binding factor A n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXK3_9BACT Length = 120 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 6/122 (4%) Query: 1 MAKEFG--RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 M K+FG R RVA E+++ +A ++ R ++PR+ +T ++ V +S DL A V+ Sbjct: 1 MRKDFGFRRADRVASEIREIMATVVARYFREPRIASVT-ITRVRLSDDLRNATVFFAVFP 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +D ++ + L+ S +R + + +R++ +P L+F +DN E R+ +L + Sbjct: 60 GEDPQSMG---EILERHSPILRKEMARQLRIKYIPRLSFVHDNGNDEEGRIESLFDQISG 116 Query: 119 HD 120 D Sbjct: 117 ED 118 >UniRef50_Q1IIT5 Ribosome-binding factor A n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RBFA_ACIBL Length = 123 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 3/116 (2%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +R+ + +++EI IL+ E+ DPR+G++T VS V ++ + A V V + +++AV Sbjct: 11 ERLGEAIREEIGAILEGELGDPRIGLVT-VSEVMIASNGKSAIVLVAVAGE-EQEAVDT- 67 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 ++ L A+G+IR + + LR+ PEL F D + G R+ L+ V K + R Sbjct: 68 LEGLAAATGYIRHEVAARLGLRVAPELLFRLDQTERYGGRVEELLKRVNKRKKSSR 123 >UniRef50_Q11P01 Ribosome-binding factor A n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=RBFA_CYTH3 Length = 133 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 76/125 (60%), Gaps = 6/125 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R Q+VA+ + KE+A I +E + + +++ V MS DL+ AK+Y++ + +D++A+ Sbjct: 5 RQQKVARLILKEMADIFLKESRVLFGNVFISITVVRMSPDLSVAKLYLSIMLQEDKNAI- 63 Query: 67 AGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDEER 123 +K ++ + +R LLG+ +R +RI+PE+ F+ D+++ M ++++ + + E+ Sbjct: 64 --LKEIKVHTKELRKLLGERIRKQVRIIPEIIFYLDDNVDYANHMDDVLSKITIPKKEDE 121 Query: 124 RVNPD 128 +P+ Sbjct: 122 NFDPN 126 >UniRef50_Q7XYI2 Ribosome-binding factor A (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYI2_BIGNA Length = 198 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 14/130 (10%) Query: 7 RPQRVAQEMQKEIA--LILQREI----------KDPRLGMMTTVSGVEMSRDLAYAKVYV 54 R RV +E+Q+E+ L+ R + D R + +V+ V+MSRDL+ AK+Y+ Sbjct: 66 RIGRVGREIQREMGDLLVNDRNVLAAIDPKYDDDDIRNMTIASVTEVQMSRDLSVAKLYL 125 Query: 55 TFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT 114 F + + + + + L G+IR ++ + + LR PEL F+ DN+L E M ++ Sbjct: 126 MF-SGGTKKSYQPILDRLNAKKGYIRRVVSQRLNLRRSPELVFYEDNTLNEADEMKRIM- 183 Query: 115 SVVKHDEERR 124 +V++ D E R Sbjct: 184 AVLREDREFR 193 >UniRef50_A3HU14 Ribosome-binding factor A n=1 Tax=Algoriphagus sp. PR1 RepID=A3HU14_9SPHI Length = 128 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 6/113 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+ A+ +QKEI I Q++ K M TV+ V +S DL AKVY++FL E Sbjct: 2 ESKRQQKYAKLIQKEIGDIFQKDAKHLVGRAMITVTHVLVSPDLGLAKVYLSFLLADPE- 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAM--RLRIVPELTFFYDNSLVEGMRMSNLVT 114 + K + + IR L K + +R++PEL FF D+S + +++ Sbjct: 61 ---STYKLINDHKKEIRHQLAKRIGKSVRVIPELAFFPDDSASYAQHIEKVIS 110 >UniRef50_C9LIQ3 Ribosome-binding factor A n=7 Tax=Prevotella RepID=C9LIQ3_9BACT Length = 134 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 6/102 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q++ + +QKE++ +LQR+ + G++ +VS V +S DL+ + Y++ + + Sbjct: 25 ETTRQQKIERLIQKELSDMLQRQTQQAP-GVLVSVSRVRISPDLSVCRGYLSVFPSERGE 83 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSL 103 + A I A + +R LGK +R LRI+PEL FF D+SL Sbjct: 84 EIVANINANVKT---VRFELGKRVRHQLRIIPELKFFIDDSL 122 >UniRef50_A5IZH0 Ribosome-binding factor A n=1 Tax=Mycoplasma agalactiae PG2 RepID=RBFA_MYCAP Length = 113 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 6/91 (6%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 R +++ I+ I+ E+ + + TV+ V +S DL + KV++ F + K+ D G+ Sbjct: 9 RKESQIKNFISTIITNELTNANI-YNPTVTDVVLSTDLGHVKVFLAF-SSKEND----GL 62 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 A++ ASG+IR L K + R VPEL F+ D Sbjct: 63 DAVKNASGYIRKRLSKTLNWRKVPELHFYID 93 >UniRef50_C0YTT6 Ribosome-binding factor A n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTT6_9FLAO Length = 119 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 62/102 (60%), Gaps = 5/102 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R ++VAQ +Q++ A + +++ + + ++ +VS V+++ DL AK+Y++ + Sbjct: 2 ESNRQRKVAQIIQEDFAELFRKQAAESKQSILVSVSDVKVTADLGIAKIYLSIFPQEFRT 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAM--RLRIVPELTFFYDNSL 103 AV +K ++E R+ +G+ M ++RI+P+L F+ D +L Sbjct: 62 AV---MKEIEENKPQYRNFIGQKMAKQVRIIPQLNFYLDTAL 100 >UniRef50_Q7URR1 Ribosome-binding factor A n=2 Tax=Planctomycetaceae RepID=RBFA_RHOBA Length = 137 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 63/112 (56%), Gaps = 3/112 (2%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 + A+ +++ +A + E++DPR+ +T + GVE+S D+ AKV V+ + D+ + + + Sbjct: 8 KAAEAIREVVANAIVTEVRDPRVRDVTVI-GVEVSPDMREAKVKVSVMGDETQKNL--SL 64 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + LQ ++GF++S + M R P+L F D M +S ++ + + E Sbjct: 65 RGLQNSAGFLQSKIANRMDTRYTPKLRFEVDRGQENAMTVSEILARIQQEKE 116 >UniRef50_Q1AW53 Ribosome-binding factor A n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RBFA_RUBXD Length = 122 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%) Query: 27 IKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKA 86 + DPRL + TV+GV +S +L++A V+ + L D + + G LQ A+G I++ +G Sbjct: 24 LSDPRLKGLVTVTGVRVSPNLSHATVFYSLLAGGDPEEAREG---LQSAAGRIQAAVGAQ 80 Query: 87 MRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 RL+ P L F D ++ R+ + V D Sbjct: 81 TRLKRTPRLRFEPDPTVERVTRIQRTLREVSGED 114 >UniRef50_C7JG37 Ribosome-binding factor A n=8 Tax=Acetobacter pasteurianus RepID=C7JG37_ACEP3 Length = 154 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 5/108 (4%) Query: 10 RVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 RV +E+++ +A + R +DP L + TV+ V +S D +A V++T L D V Sbjct: 32 RVGEEVRRVLAEVFARTTFRDPDLVDVDLTVTEVRLSPDFRHATVFITRLGRSD---VAE 88 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + AL+ + ++R+ L +R R VPEL F D +L M M L+ S Sbjct: 89 LLPALKRVAPWLRTQLAHKIRARTVPELHFQPDTALDTAMHMDTLLRS 136 >UniRef50_C6XFV6 Ribosome-binding factor A n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFV6_LIBAP Length = 128 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 6/115 (5%) Query: 3 KEFGRPQRVAQEMQKEI-ALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDK 60 K R RV +E++ + +IL E +D + + ++S V MS DL A VY++ D Sbjct: 7 KNSRRALRVGEEVRSALMWVILNNEFQDRLISRDVISISEVCMSVDLRVATVYISLPLDV 66 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVT 114 D V I AL FIR +G+++R LR VPEL F YD SL +++ L+ Sbjct: 67 SPDRV---ISALNCNIKFIRGRIGRSLRNLRYVPELRFRYDTSLQSYWKLNALMC 118 >UniRef50_Q14NW2 Putative ribosome-binding factor a protein n=1 Tax=Spiroplasma citri RepID=Q14NW2_SPICI Length = 112 Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 4/95 (4%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +R+ + +++ +I+QREI+D L ++ + V++S DL++AKVY + L +K E + Sbjct: 8 ERMQSLIARDLTIIMQREIRDEILNTLS-IHAVKLSNDLSHAKVYYSSLLNKPEAELH-- 64 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSL 103 +Q IRS L + + P+L F +D SL Sbjct: 65 -NIVQNYKNKIRSKLAHKLEIYRCPDLEFIFDRSL 98 >UniRef50_B0B9K3 Ribosome-binding factor A n=13 Tax=Chlamydiaceae RepID=RBFA_CHLT2 Length = 123 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 68/122 (55%), Gaps = 5/122 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R ++V +++ IA ++ +++K P++ T++ V +SRDL A VYV+ + E++ Sbjct: 6 RMKKVNAMLREAIAKVILKDVKHPKISNRWITITRVSLSRDLQSACVYVSIM--PHENSQ 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + + AL+ ++GFI K + L+ P+L F+ ++ + +L+ + + D ++ Sbjct: 64 EETLAALKASAGFIAFQASKDLVLKYFPDLNFYVEDIFSPQDHIESLLLKIAEQD--KKT 121 Query: 126 NP 127 NP Sbjct: 122 NP 123 >UniRef50_C1ZB80 Ribosome-binding factor A n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB80_PLALI Length = 197 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 3/115 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R + +Q + + ++L + R I+DPR+ +T +S E++ D+ A+V+V+ + E ++ Sbjct: 4 RLAKASQAVLETVSLTIMRHIRDPRVKNVTVLSA-EVAPDMRTARVHVSVMGTPKEQSL- 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + LQ A GF ++ + + R P LTF D + + S + V+ DE Sbjct: 62 -CMHGLQSACGFFQAKIADRLETRYTPVLTFVLDQGVKLSIETSKALREVLPTDE 115 >UniRef50_A6KYQ5 Ribosome-binding factor A n=36 Tax=Bacteria RepID=A6KYQ5_BACV8 Length = 111 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 66/113 (58%), Gaps = 8/113 (7%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKDE 62 E R ++++ +QKE++ I + K G++ +VS V +S D++ A+VY++ F +++ + Sbjct: 2 ETTRQNKISRLIQKELSEIFLLQTKSMN-GVLVSVSAVRISPDMSIARVYLSVFPSERSQ 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLV 113 + VK + + IR LG +R LRI+PEL FF D+SL R+ L+ Sbjct: 61 EIVKN----INDNMKSIRYELGTRVRHQLRIIPELKFFVDDSLDYAERIDELL 109 >UniRef50_Q7NBZ3 Ribosome-binding factor A n=1 Tax=Mycoplasma gallisepticum RepID=RBFA_MYCGA Length = 121 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 64/115 (55%), Gaps = 4/115 (3%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 R+ + K ++ + EI + L + ++ +++S D + AK+Y+ L + + + Sbjct: 10 RLEATIHKLLSQAISTEINNS-LIKTSVITAIKLSDDKSVAKIYIDCLIPNN---IAKTL 65 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 +A ++A+G R +L K + +R +P+L F+YD+S+ +G ++ ++ + + +E Sbjct: 66 QAYKDATGVFRHVLSKHLTIRRIPQLVFYYDDSISKGAKIDQILAEIKQEKKENH 120 >UniRef50_A8J0V0 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0V0_CHLRE Length = 196 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 14/108 (12%) Query: 7 RPQRVAQEMQKEI------------ALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYV 54 R +VA +Q+EI A+ +R++ D L + +++ +S DL KV+V Sbjct: 67 RVAKVASAIQREIGDMFVSDPVIQAAICPERKLGDDALSAVASITDTYVSNDLQVVKVFV 126 Query: 55 TFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS 102 + +D + + ++ LQ ++R L+G+ +RLR+ PE+ F YD++ Sbjct: 127 SVYSD--DYGKRVAMENLQRLEPYVRRLIGQRVRLRLTPEVRFVYDDA 172 >UniRef50_B1GZN7 Ribosome-binding factor A n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZN7_UNCTG Length = 121 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + R RV++ +Q+ I+ I+ RE+KD G++T V G ++ DL K+Y + L + Sbjct: 1 MPLSYKRSVRVSELIQQTISSIV-REMKDLDAGLVT-VMGANLTDDLLSCKIYYSVLGSE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS 102 + AGI L+ ++ +R L + LR P ++F YD+S Sbjct: 59 EYKKKVAGI--LKRSTKQVRHKLALRLNLRCTPTISFVYDDS 98 >UniRef50_B2V965 Ribosome-binding factor A n=3 Tax=Sulfurihydrogenibium RepID=B2V965_SULSY Length = 102 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 61/100 (61%), Gaps = 6/100 (6%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M ++ R ++V ++KE++ I+ EI P+ +T V+ V+ + DL+ A+V+++ L D+ Sbjct: 1 MREKSHRMEKVNSMLKKELSEIISEEIALPKDNFIT-VNFVDTTADLSEAQVFISALKDE 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 +E ++ L + SG IR +LGK +R++ P+L F D Sbjct: 60 EE-----ILEVLNKQSGHIRYVLGKRIRIKKTPKLLFKKD 94 >UniRef50_A6DGZ4 Ribosome-binding factor A n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DGZ4_9BACT Length = 119 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 9/118 (7%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL--N 58 M+K+ R + V +QKE++ + RE+ P + TV+GV+ S DL + VYV+ + N Sbjct: 1 MSKD--RMRSVDSTIQKELSSVFIREVF-PCFECLITVTGVKTSADLRHCNVYVSVMGSN 57 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + ED I+ L++ S + L K +R++ P + + D++ R+S+L+ S+ Sbjct: 58 QQKEDV----IRFLRDRSEEFFNHLSKRIRMKFTPVIHWHCDDTPETADRLSSLIDSI 111 >UniRef50_Q04U30 Ribosome-binding factor A n=4 Tax=Leptospira RepID=RBFA_LEPBJ Length = 117 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 10/115 (8%) Query: 7 RPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVT-FLNDKDEDA 64 R +++ E + +A+ IL ++KDPR+ M++ V E+S D KV+VT DK + Sbjct: 5 RRRKIEAEAVRTVAMMILSGKVKDPRVHMVS-VHRAEISEDGKNMKVFVTAICTDKKKLK 63 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD----NSLVEGMRMSNLVTS 115 V +G L A+G ++ L + LRI P + F +D SL E +R++ TS Sbjct: 64 VLSG---LNSAAGLFQTTLSGKLGLRITPRMQFLWDEEYIQSLDESLRLTRKPTS 115 >UniRef50_B2UQQ2 Ribosome-binding factor A n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=RBFA_AKKM8 Length = 125 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +V + +++EI +QR+ + P G + TV VE++ DL KV+V + V Sbjct: 4 RTDKVNELLRREIGTTIQRDFEFP--GTIVTVIEVEVTDDLKEGKVWVGVVGKMAPSQV- 60 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 ++ L G I+S + + + LR P LTF D+S G+ + NL+ + K+ Sbjct: 61 --LEKLNSRHGLIQSAVARRVVLRNTPRLTFRLDDSAQRGVDLVNLLEDIDKN 111 >UniRef50_A6LN42 Ribosome-binding factor A n=1 Tax=Thermosipho melanesiensis BI429 RepID=RBFA_THEM4 Length = 125 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 68/118 (57%), Gaps = 6/118 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTT---VSGVEMSRDLAYAKVYVTFLNDKDED 63 R +++ +++ I+ LQ+ IK P + + + +S V +S+D +A V+V+++ D D Sbjct: 6 RNKKIENKIRGLISEGLQK-IKVPEIDALKSYIVISRVLVSKDKRFADVFVSYIGD--AD 62 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + K ++ L++ GF R + + +R+ PEL F D + E +R++ L+ + K+++ Sbjct: 63 SRKRAVELLEKYKGFFRKYIAQNLRIYTTPELRFKEDIGIEESIRINKLLDEISKNNK 120 >UniRef50_A3UIH6 Ribosome-binding factor A n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UIH6_9RHOB Length = 140 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 21 LILQREIKDPRLGMMT-TVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFI 79 +I + + DP + T++ +S DL +A VYV L D +AV AL A+GFI Sbjct: 35 IIREGRVHDPHVNTAAVTITEARVSPDLRHATVYVDLLGGGDREAVAT---ALNHAAGFI 91 Query: 80 RSLLGKAMRLRIVPELTFFYDNSL 103 + LG+ + L+ P+L F D+ + Sbjct: 92 QRELGRQIELKFTPKLRFAVDDRI 115 >UniRef50_C7PES0 Ribosome-binding factor A n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PES0_CHIPD Length = 124 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 5/120 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +E R +++ Q +QKE++ I QR + G M ++S V+++ DL A+VY++ D Sbjct: 2 QESKRQKQIGQLLQKELSEIFQRMGFNVVDGGMISISSVKLTPDLLEARVYLSMFKIADS 61 Query: 63 DAVKAGIKALQEASGFIRSLLGK--AMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + ++E G I+ LG +LR VPE++ F D++L +M L + + D Sbjct: 62 HEM---VNRIKERMGEIKKDLGNRVGKQLRRVPEISLFLDDTLEYIFKMEELFKKIKEDD 118 >UniRef50_A8SMZ5 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMZ5_9FIRM Length = 132 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 3/119 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R R+ E+ + ++ + IKD R+ +T ++ V ++ DL V + D Sbjct: 5 RLGRIESEINRVLSDAIYNGIKDNRIDPSITNITKVSVTNDLGICYVSIGVFGDTK--TK 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + +K L+ A+G+++ + + + LR P+L F D S + M+ L+ V K D E+R Sbjct: 63 EKTMKGLESATGYMKKRISETLDLRHTPKLIFKLDESFEKAALMNELIIKVSKEDREKR 121 >UniRef50_B3DXW7 Ribosome-binding factor A n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXW7_METI4 Length = 116 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV++ +++E++ QRE++ G++ T+S VE + DL A ++V+ + D + Sbjct: 3 SRAIRVSEVIRRELSFCFQREVELE--GLVLTISSVETTADLKEASIFVSLFDASISDEL 60 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 I L + +GK ++ + P LTF D+SL G ++ ++ + K ++++ Sbjct: 61 LLDI--LNRHRSEWQRWIGKRLQSKFTPRLTFKIDDSLYRGDKVLRIIEELDKENKQK 116 >UniRef50_C0VVG3 Ribosome-binding factor A n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVG3_9CORY Length = 160 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 3/120 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK--DEDA 64 R R+A+ +Q +A L+ EIKD L +T V+ ++ DL A VY T +E Sbjct: 26 RAGRMAKRIQTIVATALEHEIKDWHLEYIT-VTDCSLTGDLHDATVYYTVRGKTLDEEPD 84 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 A ++L G +R ++G + +R P L+F D M +L+ DEE R Sbjct: 85 YAAAAESLNRWKGRLRKIVGDQLSVRFTPTLSFELDTVPESRAHMEDLLARARARDEEVR 144 >UniRef50_A6CF42 Probable ribosome-binding factor A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF42_9PLAN Length = 139 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++AQ + + ++ + ++DPR+ +T V V+++ D+ AK+Y++ + D+ E A+ Sbjct: 5 RLEKIAQAILETVSTTILLHLRDPRIRNVT-VLHVDVAPDVQSAKIYISIMGDEKEKAL- 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGM 107 + LQ A GF++S + ++ + P + F D ++ + + Sbjct: 63 -CMHGLQSAKGFLQSKIADRIQTKYTPVIKFVLDTAVKDSL 102 >UniRef50_Q01W29 Ribosome-binding factor A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RBFA_SOLUE Length = 123 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 3/96 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV++ +++E++ I+ E+ DPR+ + V+ V +S D +A + + D E Sbjct: 5 RTLRVSEAVREELSEIISFEMDDPRV-LEAEVTEVMVSPDSRHASIKIACRGD--EKKQN 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS 102 I AL+ A+G++R L ++LR VPEL F D + Sbjct: 62 HAIAALEHAAGYLRRELASRLQLRHVPELHFERDKN 97 >UniRef50_C5JAM5 Ribosome-binding factor A n=1 Tax=uncultured bacterium RepID=C5JAM5_9BACT Length = 143 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDP--------RLGMMTTVSGVEMSRDLAYAKVYV 54 K R R+ QE+Q+ ++ ++ R++ P + T++ ++S D+ AK+YV Sbjct: 13 KSANRQLRLCQEVQRFVSELITRKVLPPVDIDGVMVTADPLMTIARADVSPDMKTAKIYV 72 Query: 55 TFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT 114 +D + + A +K L+ +R + K + +R PEL+F D + + RM L + Sbjct: 73 RHFDD---NQLPASLKYLEAVKSVMRHAMAKQLNMRFTPELSFHVDALVEKERRMDELFS 129 Query: 115 SVVKHDEERRVNPD 128 R V PD Sbjct: 130 KTA-----RSVVPD 138 >UniRef50_C1F438 Ribosome-binding factor A n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F438_ACIC5 Length = 123 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 RVA+ +++EI +L+ E+ DPR+ VS V ++ A+V+V D +A + + Sbjct: 13 RVAETLREEIGAMLEGELSDPRISF-AHVSQVILNPGGKSAQVWVAV--DGGNEAEEQTV 69 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNS 102 + L A G+IR L + R VPELTF D S Sbjct: 70 QGLMAARGYIRHELLERTGKRRVPELTFHVDRS 102 >UniRef50_B9JYK7 Ribosome-binding factor A n=12 Tax=Rhizobiales RepID=RBFA_AGRVS Length = 137 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 9/127 (7%) Query: 10 RVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 RV ++++ I +LQR E++D + + ++S V MS DL A YV+ L D D V Sbjct: 15 RVGEQVRAAITQVLQRGEVRDDLIEKTVISISEVRMSTDLKVATAYVSPLGVSDHDTV-- 72 Query: 68 GIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 I AL + +IR +G +R ++ +PE+ F D S ++ L+ S + R + Sbjct: 73 -IAALNRHAKYIRGRIGGQLRQMKYMPEVRFRDDTSFDNYQKIDALLRS---PEVARDLG 128 Query: 127 PDDSKED 133 PD+ K++ Sbjct: 129 PDEDKQE 135 >UniRef50_Q5PAJ6 Ribosome-binding factor A n=4 Tax=Anaplasma RepID=RBFA_ANAMM Length = 117 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +VA +++ +A + RE D L M ++SGV++S D A V+V + DK D + Sbjct: 11 RSLKVASVLKRALAQLFIREFYD--LSSMLSISGVKVSEDTRNATVFVA-IGDKSVDGDE 67 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + AL +AS IR + + ++LR VP L F D +R+S ++ + Sbjct: 68 V-VAALNDASNSIRRAVFRYLKLRYVPRLHFKLDVEFDNFLRISEIMAT 115 >UniRef50_Q6F193 Ribosome-binding factor A n=1 Tax=Mesoplasma florum RepID=Q6F193_MESFL Length = 116 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Query: 17 KEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEAS 76 +E+ +I++RE+K+ L ++ ++ V ++ D AK+Y +FL E + L+E Sbjct: 16 RELTIIIEREMKNDVLRALS-IAEVRLTNDSEIAKIYWSFLPLNKEITKELIASELEENK 74 Query: 77 GFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 IR L + R VP+L F YD SL R+ ++ V K Sbjct: 75 KTIRMKLAHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK 116 >UniRef50_D2R7W9 Ribosome-binding factor A n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7W9_9PLAN Length = 165 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 8/97 (8%) Query: 12 AQEMQKEI-ALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIK 70 AQE +E+ ++ + EI+DPR+ +T V VEM+ D+ AK+ V+ + D+ + K + Sbjct: 9 AQEAIREVVSMAILTEIRDPRVRDVTVVK-VEMTPDMRAAKIMVSVMGDEQRE--KLTVL 65 Query: 71 ALQEASGFIRSLLGKAMRLRIVPELTFFYD----NSL 103 LQ ++GF++ + + R P+LTF D NSL Sbjct: 66 GLQNSAGFLQKRIADEIDTRYTPKLTFEIDRGVKNSL 102 >UniRef50_B6AR14 Probable ribosome-binding factor A n=2 Tax=Leptospirillum sp. Group II RepID=B6AR14_9BACT Length = 131 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 4/98 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + R RV+ E+++ +AL+L R +P LG +T + V + DL A+++ + Sbjct: 1 MKPVYRRADRVSSEIREIVALVLSRFSAEPALGRLTILY-VNLPDDLKVARIHYSVF--P 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFF 98 ED G + L G IR +GK +R++ VP++ F Sbjct: 58 GEDPHYYG-RLLTRHKGLIRKEVGKLLRMKWVPDIEFL 94 >UniRef50_UPI0001745B62 ribosome-binding factor A n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745B62 Length = 163 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 RV + +++E+ I+ R G + T+ V+++ DL +YV L E A + Sbjct: 19 RVRELIKRELGPIVDRNFT--FAGSVVTIHEVDVTPDLKQCFIYVGILGK--EHAAPNIV 74 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + L E G I+ L K + L+ P LTF YD S+ G+R+ L+ ++ Sbjct: 75 RKLNENRGLIQRELFKRVILKNSPSLTFKYDTSIERGVRVLALIETL 121 >UniRef50_Q8EWT9 Ribosome-binding factor A n=1 Tax=Mycoplasma penetrans RepID=RBFA_MYCPE Length = 116 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 37 TVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELT 96 TV V +S+D + AKVY++ D+ + +K + ASGF R++L K + LR P + Sbjct: 37 TVHYVTLSKDKSIAKVYISCY---DKTIIDKILKKINGASGFFRTILAKNLNLRKAPAIV 93 Query: 97 FFYDNSL 103 F D S+ Sbjct: 94 FLNDESI 100 >UniRef50_A9NF13 Ribosome-binding factor A n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF13_ACHLI Length = 115 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 13/116 (11%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND------KDED 63 R+A + +E+ I+ IK+ ++G +T ++ ++++D +Y VY T ++D K +D Sbjct: 7 RLASRIFRELVHIVNDVIKNTQIGYIT-LTETKVTKDKSYCYVYYTIIDDSVEAKKKVQD 65 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + AG K ++ L K +R +P+L F YD +L G + L++ + K+ Sbjct: 66 LLDAGKKEIR------MKLASKVNDIRKIPDLVFKYDEALAYGNHIDKLLSDINKN 115 >UniRef50_D1AY63 Ribosome-binding factor A n=5 Tax=Fusobacteriaceae RepID=D1AY63_STRM9 Length = 124 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/111 (23%), Positives = 58/111 (52%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R + + +E+ + I + E+K+ ++ + TV V +S D YA V ++ L+ K + Sbjct: 5 RKRGLEKEISRIIGTAILLEVKNEKIRNLVTVKSVNLSPDARYADVIMSILDYKQNINKE 64 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 ++ L + GF R +G+ + +R PE+ D+S+ +++S ++ + Sbjct: 65 KLLEELNKLKGFFRKKVGENLEIRYTPEIRIHLDDSVEYSVKISKILKEAI 115 >UniRef50_Q1DFL3 Putative ribosome-binding factor A n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DFL3_MYXXD Length = 120 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 RV + +E++ + E+ DPRL + S E+S D ++ T + ++ Sbjct: 16 RVQSHLSQEVSRTFRGELSDPRLEGVALTS-FELSPDGRLVRIGYTVTPEAAAAGLRPLQ 74 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFY 99 AL+ ASG++RS L + + L+ VP+L F Y Sbjct: 75 AALEGASGYLRSQLAEHLDLKRVPQLRFIY 104 >UniRef50_C7LK64 Putative ribosome-binding factor A n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LK64_SULMS Length = 136 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 56/99 (56%), Gaps = 5/99 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + +R A ++KEI+ I R++ + ++ V ++ D + AK++++F K++ ++ Sbjct: 14 KNKRAAILIKKEISSIFNRKLIYSPHRIFIIITQVILNSDFSLAKIFISFFPKKNQYSL- 72 Query: 67 AGIKALQEASGFIRSLLGKAMRLRI--VPELTFFYDNSL 103 IK + + S F + +L + +R +P ++F+ D+SL Sbjct: 73 --IKKINKKSKFYKKILFQNLRFHFKKMPNISFYIDDSL 109 >UniRef50_A1KMI1 Ribosome-binding factor A n=26 Tax=Actinomycetales RepID=RBFA_MYCBP Length = 183 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Query: 19 IALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND--KDEDAVKAGIKALQEAS 76 +A ++ EIKDP L + T++ +++ DL A VY T + DE AL+ A Sbjct: 18 VASAIEYEIKDPGLAGV-TITDAKVTADLHDATVYYTVMGRTLHDEPNCAGAAAALERAK 76 Query: 77 GFIRSLLGKAMRLRIVPELTFFYDN 101 G +R+ +G +R P LTF D Sbjct: 77 GVLRTKVGAGTGVRFTPTLTFTLDT 101 >UniRef50_A0NUK1 Ribosome-binding factor A n=3 Tax=Rhodobacteraceae RepID=A0NUK1_9RHOB Length = 170 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 13/125 (10%) Query: 1 MAKEFG--------RPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYA 50 MA++ G R RV + ++KE++ IL R DP L G++ T+ V M+ DL A Sbjct: 30 MARQHGQDSRGPSQRQLRVGETVRKELSDILTRGRFSDPDLDGVIVTIPEVRMTPDLRLA 89 Query: 51 KVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMS 110 V L + + V+ KAL ++ ++R + + + ++ +P+L F D + R+ Sbjct: 90 TCLVMPLGGVNAENVE---KALNRSAKYLRGQVSRRLTMKYMPDLRFVLDTRFDDDDRIG 146 Query: 111 NLVTS 115 L+ S Sbjct: 147 TLLHS 151 >UniRef50_B3PNC5 Ribosome-binding factor A n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNC5_MYCA5 Length = 110 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 5/63 (7%) Query: 38 VSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTF 97 ++ V +S D ++AKVYVTF DK+ + + + + FIRS++ K+ + + +PEL F Sbjct: 34 INDVILSNDGSHAKVYVTFFKDKER-----YFEKITKMAPFIRSVVAKSWKYKKLPELVF 88 Query: 98 FYD 100 D Sbjct: 89 LID 91 >UniRef50_Q83ND3 Ribosome-binding factor A n=2 Tax=Tropheryma whipplei RepID=RBFA_TROW8 Length = 196 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 10/116 (8%) Query: 3 KEFG-----RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL 57 KEF R R+A ++ I+ ++ +++D +LG++T ++ V+++ DL +AKV+VT Sbjct: 5 KEFAMKDQIRAHRMAGRIRHLISRQIETKLRD-QLGLVT-ITEVQVTGDLHHAKVFVTVY 62 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 KDE + +K L++ R LG +++R VP + F D + M L+ Sbjct: 63 GTKDE--AQTALKILEDNRANFRRSLG-VLKVRFVPTVEFELDRLFEDAGIMDELI 115 >UniRef50_C0QU19 Ribosome-binding factor A n=1 Tax=Persephonella marina EX-H1 RepID=C0QU19_PERMH Length = 100 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K R ++V E+++ ++ I EI + ++T + VE + DL AKVYV+ L + + Sbjct: 2 KRSHRMEKVNNELKRVLSEIFLTEIPVQQDNIVTVLR-VEATSDLNEAKVYVSALKN-GQ 59 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFF 98 D V+ L + SG+IR L+G +++R VP+ F Sbjct: 60 DVVEQ----LNQKSGYIRHLVGNRIKIRKVPKFKFI 91 >UniRef50_Q3YS02 Ribosome-binding factor A n=6 Tax=canis group RepID=Q3YS02_EHRCJ Length = 115 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND-KDEDAV 65 R +VA + + I+ +L ++I + T+S VE+S D+ A V++ D D++AV Sbjct: 9 RNLKVASVLNRAISKVLMQDICLSN-NHLITISKVEVSNDIRNANVFIIISQDCTDKEAV 67 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTF 97 IK L ++S FIR + + LR +P L F Sbjct: 68 ---IKELNDSSYFIRKAIFPYVDLRYIPRLYF 96 >UniRef50_Q2G5E9 Ribosome-binding factor A n=6 Tax=Sphingomonadales RepID=RBFA_NOVAD Length = 135 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%) Query: 21 LILQREIKDPRLGMMT-TVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFI 79 L+ ++E+ D L T +V+ V MS DL +A V++ L +DED V +KAL+ + F Sbjct: 29 LLARQEVHDDVLSAHTVSVTEVRMSPDLRHATVFIKALLGEDEDLV---LKALRTNTAFF 85 Query: 80 RSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + + + +RL+ L F D S ++ L+ Sbjct: 86 QREVAQRLRLKYAARLKFLADESFDVASKIETLL 119 >UniRef50_B3ER34 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ER34_AMOA5 Length = 125 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%) Query: 22 ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRS 81 I E+ + ++ TV+ + + KVYV+F+ ++ + IK L++ IR Sbjct: 21 IFLHELANSFGNILVTVTSLYICDKTRVVKVYVSFMPSQNGPRM---IKELEKHKSKIRG 77 Query: 82 LLGK--AMRLRIVPELTFFYDNSL 103 LLGK A +LR +PEL F DNS+ Sbjct: 78 LLGKRLANKLRSIPELKFHLDNSI 101 >UniRef50_Q26H81 Ribosome-binding factor A n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26H81_9BACT Length = 131 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 58/104 (55%), Gaps = 6/104 (5%) Query: 3 KEFGRPQRVAQEMQKEIALILQREI-KDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 +E R ++++ +Q++I+ ++Q + K+ ++ +V+ V ++ DL YAK Y++ Sbjct: 2 EESNRQKKISGILQEDISSVIQDYLRKNTVKNLLVSVTKVTVTPDLGYAKAYLSVF---P 58 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSL 103 D A ++ + E +R + +R LR +PEL FF D+SL Sbjct: 59 ADKAAAVVQEIVEIGPELRHQVAAKVRHQLRRMPELQFFNDDSL 102 >UniRef50_Q1IXP4 Ribosome-binding factor A n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IXP4_DEIGD Length = 96 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Query: 27 IKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKA 86 ++DPR+ ++ TV V ++ D A+VYV+ + + + A + AL A G ++ + Sbjct: 21 LRDPRVPLIVTVERVAVTADYGLARVYVSAMGAE----LPALLDALAHARGHLQREVAAH 76 Query: 87 MRLRIVPELTFFYDN 101 +RLR VP L F N Sbjct: 77 LRLRRVPTLEFHAAN 91 >UniRef50_B6YQT6 Ribosome-binding factor A n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YQT6_AZOPC Length = 116 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 5/97 (5%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 Q++ + +QKEI + + + + R + +V+ V +S DL+ AK+ FL+ D + Sbjct: 7 QKIERLVQKEINELFRLQTQQMRQLTIISVTTVRISSDLSVAKI---FLSIYPSDKIGKI 63 Query: 69 IKALQEASGFIRSLLGKAM--RLRIVPELTFFYDNSL 103 +++++ IR LG + ++R +P+L FF DNS Sbjct: 64 TQSIEQGKSAIRYNLGLRIGKQIRHIPKLAFFVDNSF 100 >UniRef50_D1J8W5 Ribosome-binding factor A n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8W5_MYCHP Length = 113 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 5/61 (8%) Query: 37 TVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELT 96 +++ V +S D ++AK+YVT D+ K ++ L + FIRS++ K + +++PEL Sbjct: 33 SINDVILSNDGSHAKIYVTLFKDQ-----KRYLEKLTTMTPFIRSVVAKNWKYKVLPELI 87 Query: 97 F 97 F Sbjct: 88 F 88 >UniRef50_A6GW80 Ribosome-binding factor A n=12 Tax=Bacteroidetes RepID=RBFA_FLAPJ Length = 130 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 6/103 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 E R +++ +QK++ ILQ EI+ + ++ +VS V ++ DL A+VY++ + Sbjct: 2 ETNRQKKIGGVIQKDLVDILQGEIRKNGISNLVISVSKVSVTTDLGVARVYLSVFPQEKA 61 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRI--VPELTFFYDNSL 103 + IK+ I+ L + +RL++ VP L F+ D+SL Sbjct: 62 PEILESIKS---NMYLIKHDLSQRVRLQLRKVPNLAFYIDDSL 101 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q48E78 Ribosome-binding factor A n=11 Tax=Gammaproteoba... 166 2e-40 UniRef50_Q65SL1 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 166 2e-40 UniRef50_Q3KI83 Ribosome-binding factor A n=14 Tax=Proteobacteri... 166 2e-40 UniRef50_B7V1F5 Ribosome-binding factor A n=6 Tax=Gammaproteobac... 164 7e-40 UniRef50_Q3IJ52 Ribosome-binding factor A n=221 Tax=Gammaproteob... 162 3e-39 UniRef50_Q482T8 Ribosome-binding factor A n=2 Tax=Alteromonadale... 162 3e-39 UniRef50_Q1GXD5 Ribosome-binding factor A n=3 Tax=Betaproteobact... 160 9e-39 UniRef50_Q5NZS0 Ribosome-binding factor A n=1 Tax=Aromatoleum ar... 159 3e-38 UniRef50_B5JRR1 Ribosome-binding factor A n=1 Tax=gamma proteoba... 156 2e-37 UniRef50_Q0A798 Ribosome-binding factor A n=3 Tax=Ectothiorhodos... 154 7e-37 UniRef50_Q18BH6 Ribosome-binding factor A n=6 Tax=Clostridium Re... 150 8e-36 UniRef50_Q5X1C4 Ribosome-binding factor A n=6 Tax=Legionella Rep... 150 1e-35 UniRef50_A9KNW3 Ribosome-binding factor A n=23 Tax=Bacteria RepI... 149 3e-35 UniRef50_C7R7H8 Ribosome-binding factor A n=1 Tax=Kangiella kore... 149 3e-35 UniRef50_C4Z5N8 Ribosome-binding factor A n=10 Tax=Firmicutes Re... 149 4e-35 UniRef50_A4BAM6 Ribosome-binding factor A n=2 Tax=Gammaproteobac... 148 4e-35 UniRef50_A4IMD9 Ribosome-binding factor A n=50 Tax=Firmicutes Re... 146 2e-34 UniRef50_Q21H62 Ribosome-binding factor A n=1 Tax=Saccharophagus... 145 5e-34 UniRef50_Q3J9B7 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 145 5e-34 UniRef50_B8D9G1 Ribosome-binding factor A n=4 Tax=Buchnera aphid... 145 5e-34 UniRef50_C5BPV8 Ribosome-binding factor A n=9 Tax=Proteobacteria... 145 5e-34 UniRef50_C2KV11 Ribosome-binding factor A n=1 Tax=Oribacterium s... 144 6e-34 UniRef50_A4XL69 Ribosome-binding factor A n=15 Tax=Firmicutes Re... 144 1e-33 UniRef50_B2A398 Ribosome-binding factor A n=9 Tax=Firmicutes Rep... 143 1e-33 UniRef50_Q1K0G2 Ribosome-binding factor A n=1 Tax=Desulfuromonas... 142 2e-33 UniRef50_B3PI97 Ribosome-binding factor A n=1 Tax=Cellvibrio jap... 142 3e-33 UniRef50_D0L0S5 Ribosome-binding factor A n=1 Tax=Halothiobacill... 142 3e-33 UniRef50_A6T0Y7 Ribosome-binding factor A n=3 Tax=Betaproteobact... 142 3e-33 UniRef50_C7RU80 Ribosome-binding factor A n=1 Tax=Candidatus Acc... 142 3e-33 UniRef50_Q057K0 Ribosome-binding factor A n=1 Tax=Buchnera aphid... 141 6e-33 UniRef50_B1I386 Ribosome-binding factor A n=1 Tax=Candidatus Des... 141 7e-33 UniRef50_A1U5Z9 Ribosome-binding factor A n=7 Tax=Gammaproteobac... 141 7e-33 UniRef50_Q0VSS0 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 140 1e-32 UniRef50_B8JFY8 Ribosome-binding factor A n=4 Tax=Anaeromyxobact... 140 1e-32 UniRef50_Q74CT2 Ribosome-binding factor A n=1 Tax=Geobacter sulf... 140 1e-32 UniRef50_A0LE17 Ribosome-binding factor A n=1 Tax=Magnetococcus ... 140 1e-32 UniRef50_Q1YSY1 Ribosome-binding factor A n=1 Tax=gamma proteoba... 140 2e-32 UniRef50_A4J5X1 Ribosome-binding factor A n=1 Tax=Desulfotomacul... 140 2e-32 UniRef50_B9KZ59 Ribosome-binding factor A n=1 Tax=Thermomicrobiu... 140 2e-32 UniRef50_C5RLI4 Ribosome-binding factor A n=2 Tax=Clostridium Re... 139 2e-32 UniRef50_Q1MZS3 Ribosome-binding factor A n=1 Tax=Bermanella mar... 139 2e-32 UniRef50_Q2RJM4 Ribosome-binding factor A n=5 Tax=Bacteria RepID... 139 3e-32 UniRef50_B0CDK8 Ribosome-binding factor A n=10 Tax=Cyanobacteria... 139 3e-32 UniRef50_A5WBS6 Ribosome-binding factor A n=19 Tax=Moraxellaceae... 139 4e-32 UniRef50_C0QHM3 Ribosome-binding factor A n=1 Tax=Desulfobacteri... 138 4e-32 UniRef50_C0WBC7 Ribosome-binding factor A n=1 Tax=Acidaminococcu... 138 5e-32 UniRef50_C8W4P3 Ribosome-binding factor A n=3 Tax=Clostridia Rep... 138 5e-32 UniRef50_A7X1Q2 Ribosome-binding factor A n=133 Tax=Bacillales R... 138 7e-32 UniRef50_Q2LWT9 Ribosome-binding factor A n=2 Tax=Syntrophobacte... 138 7e-32 UniRef50_A1HSB5 Ribosome-binding factor A n=1 Tax=Thermosinus ca... 137 1e-31 UniRef50_B5YEH6 Ribosome-binding factor A n=2 Tax=Dictyoglomus R... 137 2e-31 UniRef50_B9M1G1 Ribosome-binding factor A n=8 Tax=Desulfuromonad... 136 2e-31 UniRef50_B8FCY7 Ribosome-binding factor A n=1 Tax=Desulfatibacil... 136 2e-31 UniRef50_A6TRK6 Ribosome-binding factor A n=2 Tax=Alkaliphilus R... 136 2e-31 UniRef50_A9AV50 Ribosome-binding factor A n=1 Tax=Herpetosiphon ... 136 2e-31 UniRef50_B2GBN8 Ribosome-binding factor A n=86 Tax=Lactobacillal... 136 3e-31 UniRef50_UPI0000E0F5A5 ribosome-binding factor A n=1 Tax=Glaciec... 135 4e-31 UniRef50_A7BQM5 Ribosome-binding factor A n=1 Tax=Beggiatoa sp. ... 135 5e-31 UniRef50_B0TQA1 Ribosome-binding factor A n=43 Tax=Gammaproteoba... 134 7e-31 UniRef50_C2BHN3 Ribosome-binding factor A n=3 Tax=Anaerococcus R... 134 9e-31 UniRef50_Q31GK4 Ribosome-binding factor A n=1 Tax=Thiomicrospira... 134 1e-30 UniRef50_D1VSB2 Ribosome-binding factor A n=1 Tax=Peptoniphilus ... 133 1e-30 UniRef50_D1BM61 Ribosome-binding factor A n=8 Tax=Veillonellacea... 133 1e-30 UniRef50_Q2JW85 Ribosome-binding factor A n=18 Tax=Cyanobacteria... 133 2e-30 UniRef50_Q1LSK9 Ribosome-binding factor A n=1 Tax=Baumannia cica... 133 2e-30 UniRef50_C7RGP1 Ribosome-binding factor A n=2 Tax=Anaerococcus R... 132 3e-30 UniRef50_UPI0000E87C6E ribosome-binding factor A n=1 Tax=Methylo... 132 3e-30 UniRef50_D1CFX0 Ribosome-binding factor A n=1 Tax=Thermobaculum ... 132 5e-30 UniRef50_Q044B6 Ribosome-binding factor A n=58 Tax=Lactobacillal... 132 5e-30 UniRef50_A1KUJ5 Ribosome-binding factor A n=28 Tax=Neisseriaceae... 132 5e-30 UniRef50_C7H128 MgpA protein n=1 Tax=Eubacterium saphenum ATCC 4... 131 6e-30 UniRef50_A2CCY5 Ribosome-binding factor A n=23 Tax=cellular orga... 131 7e-30 UniRef50_B1IA81 Ribosome-binding factor A n=30 Tax=Streptococcus... 131 8e-30 UniRef50_C8NBH2 Ribosome-binding factor A n=1 Tax=Cardiobacteriu... 130 9e-30 UniRef50_C1A8N9 Ribosome-binding factor A n=1 Tax=Gemmatimonas a... 130 9e-30 UniRef50_A3D7K5 Ribosome-binding factor A n=20 Tax=Gammaproteoba... 130 9e-30 UniRef50_Q8DVP8 Ribosome-binding factor A n=5 Tax=Lactobacillale... 130 1e-29 UniRef50_Q3AB99 Ribosome-binding factor A n=1 Tax=Carboxydotherm... 130 1e-29 UniRef50_C9RKT5 Ribosome-binding factor A n=1 Tax=Fibrobacter su... 130 1e-29 UniRef50_B9E1K3 Ribosome-binding factor A n=35 Tax=Clostridium R... 130 2e-29 UniRef50_A3MJW5 Ribosome-binding factor A n=41 Tax=Burkholderial... 130 2e-29 UniRef50_Q609C1 Ribosome-binding factor A n=1 Tax=Methylococcus ... 130 2e-29 UniRef50_B5YHT9 Ribosome-binding factor A n=1 Tax=Thermodesulfov... 129 2e-29 UniRef50_Q6MD65 Ribosome-binding factor A n=1 Tax=Candidatus Pro... 129 2e-29 UniRef50_Q8D2X7 Ribosome-binding factor A n=1 Tax=Wigglesworthia... 129 2e-29 UniRef50_A6NTY2 Putative uncharacterized protein n=1 Tax=Bactero... 129 4e-29 UniRef50_C5S648 Ribosome-binding factor A n=1 Tax=Allochromatium... 129 4e-29 UniRef50_UPI000196CD5A hypothetical protein CATMIT_02506 n=1 Tax... 129 4e-29 UniRef50_B0S1E4 Ribosome-binding factor A n=2 Tax=Finegoldia mag... 128 7e-29 UniRef50_D1R4P7 Putative uncharacterized protein n=1 Tax=Parachl... 127 7e-29 UniRef50_B4E7L2 Ribosome-binding factor A n=21 Tax=Burkholderial... 127 8e-29 UniRef50_B7GNA2 Ribosome-binding factor A n=10 Tax=Bifidobacteri... 127 9e-29 UniRef50_A5UZQ3 Ribosome-binding factor A n=5 Tax=Chloroflexacea... 127 1e-28 UniRef50_O65693 Probable ribosome-binding factor A, chloroplasti... 127 1e-28 UniRef50_A5EWY8 Ribosome-binding factor A n=1 Tax=Dichelobacter ... 127 2e-28 UniRef50_Q04GM9 Ribosome-binding factor A n=2 Tax=Oenococcus oen... 127 2e-28 UniRef50_B6J6B2 Ribosome-binding factor A n=6 Tax=Coxiella burne... 126 2e-28 UniRef50_A1A0A3 Ribosome-binding factor A n=6 Tax=Bifidobacteriu... 126 2e-28 UniRef50_C4FWY3 Putative uncharacterized protein n=1 Tax=Catonel... 126 2e-28 UniRef50_Q3BRP6 Ribosome-binding factor A n=19 Tax=Xanthomonadac... 125 3e-28 UniRef50_Q1DAM4 Ribosome-binding factor A n=3 Tax=Cystobacterine... 125 4e-28 UniRef50_A0Q8F2 Ribosome-binding factor A n=18 Tax=Francisella R... 125 4e-28 UniRef50_Q1Q1G7 Similar to ribosome-binding factor A n=1 Tax=Can... 125 4e-28 UniRef50_A5FQR5 Ribosome-binding factor A n=5 Tax=Dehalococcoide... 125 5e-28 UniRef50_C1EAK4 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 125 5e-28 UniRef50_A8ZZ63 Ribosome-binding factor A n=1 Tax=Desulfococcus ... 125 6e-28 UniRef50_D2MPT2 Ribosome-binding factor A n=7 Tax=Bacteria RepID... 124 7e-28 UniRef50_UPI0001C31DB9 ribosome-binding factor A n=1 Tax=Conexib... 124 9e-28 UniRef50_D2UCR3 Probable ribosome-binding factor a protein n=1 T... 124 9e-28 UniRef50_A5ZAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 124 1e-27 UniRef50_Q0AYI7 Ribosome-binding factor A n=1 Tax=Syntrophomonas... 124 1e-27 UniRef50_D1C376 Ribosome-binding factor A n=1 Tax=Sphaerobacter ... 124 1e-27 UniRef50_C7H6A6 Ribosome-binding factor A n=3 Tax=Ruminococcacea... 123 2e-27 UniRef50_C5NYH6 Ribosome-binding factor A n=1 Tax=Gemella haemol... 123 2e-27 UniRef50_P59411 Ribosome-binding factor A n=1 Tax=Buchnera aphid... 122 4e-27 UniRef50_C8NZL4 Ribosome-binding factor A n=1 Tax=Erysipelothrix... 122 5e-27 UniRef50_A6W7Z4 Ribosome-binding factor A n=14 Tax=Actinobacteri... 121 6e-27 UniRef50_Q0RDS6 Ribosome-binding factor A n=44 Tax=Actinomycetal... 121 6e-27 UniRef50_B6BVJ9 Ribosome-binding factor A n=1 Tax=beta proteobac... 120 1e-26 UniRef50_A1TSK2 Ribosome-binding factor A n=15 Tax=Burkholderial... 120 2e-26 UniRef50_Q493T6 Ribosome-binding factor A n=2 Tax=Candidatus Blo... 120 2e-26 UniRef50_Q6AJY5 Ribosome-binding factor A n=1 Tax=Desulfotalea p... 119 2e-26 UniRef50_B5Y926 Ribosome-binding factor A n=1 Tax=Coprothermobac... 119 3e-26 UniRef50_B4RC51 Ribosome-binding factor A n=2 Tax=Alphaproteobac... 119 3e-26 UniRef50_Q2J730 Ribosome-binding factor A n=14 Tax=Actinomycetal... 118 4e-26 UniRef50_B2S4C7 Ribosome-binding factor A n=4 Tax=Treponema RepI... 118 5e-26 UniRef50_D0MI92 Ribosome-binding factor A n=1 Tax=Rhodothermus m... 117 9e-26 UniRef50_A6GK84 Ribosome-binding factor A n=1 Tax=Plesiocystis p... 117 9e-26 UniRef50_C0EAK4 Putative uncharacterized protein n=2 Tax=Clostri... 117 1e-25 UniRef50_C7JG37 Ribosome-binding factor A n=8 Tax=Acetobacter pa... 117 1e-25 UniRef50_A4QEZ1 Ribosome-binding factor A n=8 Tax=Actinomycetale... 117 1e-25 UniRef50_A8PNL0 Ribosome-binding factor A n=1 Tax=Rickettsiella ... 117 1e-25 UniRef50_C6W5Y8 Ribosome-binding factor A n=1 Tax=Dyadobacter fe... 117 2e-25 UniRef50_B8DW44 Ribosome-binding factor A n=4 Tax=Bifidobacteriu... 116 2e-25 UniRef50_Q46HR0 Ribosome-binding factor A n=2 Tax=Prochlorococcu... 116 3e-25 UniRef50_D0WR20 Ribosome-binding factor A n=1 Tax=Actinomyces sp... 115 3e-25 UniRef50_Q7URR1 Ribosome-binding factor A n=2 Tax=Planctomycetac... 115 4e-25 UniRef50_A8SMZ5 Putative uncharacterized protein n=1 Tax=Parvimo... 115 6e-25 UniRef50_C8QYE1 Ribosome-binding factor A n=1 Tax=Desulfurivibri... 114 7e-25 UniRef50_D0WDY7 Ribosome-binding factor A n=1 Tax=Slackia exigua... 114 8e-25 UniRef50_B3QZW6 Ribosome-binding factor A n=4 Tax=Candidatus Phy... 114 8e-25 UniRef50_B1CB53 Putative uncharacterized protein n=1 Tax=Anaerof... 114 8e-25 UniRef50_Q0AK66 Ribosome-binding factor A n=2 Tax=Hyphomonadacea... 114 9e-25 UniRef50_D1Y7J4 Ribosome-binding factor A n=1 Tax=Pyramidobacter... 114 1e-24 UniRef50_A4S0F7 Predicted protein (Fragment) n=3 Tax=Mamiellales... 113 1e-24 UniRef50_D2QJ35 Ribosome-binding factor A n=2 Tax=Flexibacterace... 113 1e-24 UniRef50_B0MY67 Putative uncharacterized protein n=1 Tax=Alistip... 113 1e-24 UniRef50_UPI00016C38FF probable ribosome-binding factor A n=1 Ta... 113 2e-24 UniRef50_C9M6R1 Ribosome-binding factor A n=1 Tax=Jonquetella an... 113 2e-24 UniRef50_B8ZRT3 Ribosome-binding factor A n=7 Tax=Actinomycetale... 112 3e-24 UniRef50_A5FV22 Ribosome-binding factor A n=4 Tax=Acetobacterace... 112 3e-24 UniRef50_C1TMK9 Ribosome-binding factor A n=1 Tax=Dethiosulfovib... 112 3e-24 UniRef50_B2S1E6 Ribosome-binding factor A n=2 Tax=Borrelia RepID... 112 3e-24 UniRef50_C0VVG3 Ribosome-binding factor A n=2 Tax=Corynebacteriu... 112 4e-24 UniRef50_C2BRN5 Ribosome-binding factor A n=3 Tax=Mobiluncus Rep... 112 4e-24 UniRef50_Q5NQ28 Ribosome-binding factor A n=3 Tax=Zymomonas mobi... 112 5e-24 UniRef50_D1BAC0 Ribosome-binding factor A n=1 Tax=Thermanaerovib... 111 6e-24 UniRef50_UPI00016C0EBD ribosome-binding factor A n=1 Tax=Epulopi... 111 6e-24 UniRef50_A9ITX2 Ribosome-binding factor A n=5 Tax=Bordetella Rep... 111 6e-24 UniRef50_Q8RHJ7 Ribosome-binding factor A n=14 Tax=Fusobacterium... 111 7e-24 UniRef50_D2MK31 Ribosome-binding factor A n=1 Tax=Candidatus Por... 111 7e-24 UniRef50_B0SH19 Ribosome-binding factor A n=2 Tax=Leptospira bif... 111 7e-24 UniRef50_B3QUN3 Ribosome-binding factor A n=1 Tax=Chloroherpeton... 111 8e-24 UniRef50_A7IC07 Ribosome-binding factor A n=35 Tax=Rhizobiales R... 111 8e-24 UniRef50_B0MQX5 Putative uncharacterized protein n=1 Tax=Eubacte... 111 9e-24 UniRef50_C8WI33 Ribosome-binding factor A n=3 Tax=Coriobacteriac... 111 9e-24 UniRef50_B9KAB3 Ribosome-binding factor A n=1 Tax=Thermotoga nea... 110 1e-23 UniRef50_C6HXK3 Ribosome-binding factor A n=1 Tax=Leptospirillum... 110 1e-23 UniRef50_B9XFC2 Ribosome-binding factor A n=1 Tax=bacterium Elli... 110 1e-23 UniRef50_A5CXX7 Ribosome-binding factor A n=4 Tax=Bacteria RepID... 110 1e-23 UniRef50_B1LCH6 Ribosome-binding factor A n=8 Tax=Thermotogaceae... 110 2e-23 UniRef50_A3HU14 Ribosome-binding factor A n=1 Tax=Algoriphagus s... 110 2e-23 UniRef50_A0NUK1 Ribosome-binding factor A n=3 Tax=Rhodobacterace... 110 2e-23 UniRef50_A3UIH6 Ribosome-binding factor A n=1 Tax=Oceanicaulis a... 110 2e-23 UniRef50_A9G882 Ribosome-binding factor A n=1 Tax=Sorangium cell... 109 2e-23 UniRef50_A4X4N9 Ribosome-binding factor A n=4 Tax=Actinomycetale... 108 4e-23 UniRef50_B0PH14 Putative uncharacterized protein n=2 Tax=Clostri... 108 4e-23 UniRef50_C0GUB2 Ribosome-binding factor A n=1 Tax=Desulfonatrono... 108 5e-23 UniRef50_C8X0G5 Ribosome-binding factor A n=3 Tax=Desulfovibrion... 108 6e-23 UniRef50_UPI0001745B62 ribosome-binding factor A n=1 Tax=Verruco... 108 6e-23 UniRef50_C6XX51 Ribosome-binding factor A n=4 Tax=Sphingobacteri... 107 9e-23 UniRef50_B5RMZ6 Ribosome-binding factor A n=2 Tax=Borrelia RepID... 107 1e-22 UniRef50_Q7V3G3 Ribosome-binding factor A n=7 Tax=Prochlorococcu... 107 1e-22 UniRef50_B0B9K3 Ribosome-binding factor A n=13 Tax=Chlamydiaceae... 107 1e-22 UniRef50_A4E6U6 Putative uncharacterized protein n=1 Tax=Collins... 107 1e-22 UniRef50_Q1IIT5 Ribosome-binding factor A n=1 Tax=Candidatus Kor... 106 3e-22 UniRef50_D0LZ88 Ribosome-binding factor A n=1 Tax=Haliangium och... 105 3e-22 UniRef50_Q2S1N8 Ribosome-binding factor A n=1 Tax=Salinibacter r... 105 4e-22 UniRef50_Q6MMS5 Ribosome-binding factor A n=1 Tax=Bdellovibrio b... 105 4e-22 UniRef50_Q11P01 Ribosome-binding factor A n=1 Tax=Cytophaga hutc... 105 4e-22 UniRef50_Q1AW53 Ribosome-binding factor A n=1 Tax=Rubrobacter xy... 105 4e-22 UniRef50_C1SPK3 Ribosome-binding factor A n=1 Tax=Denitrovibrio ... 105 5e-22 UniRef50_B1GZN7 Ribosome-binding factor A n=1 Tax=uncultured Ter... 105 5e-22 UniRef50_Q0SM49 Ribosome-binding factor A n=18 Tax=Borrelia burg... 105 6e-22 UniRef50_C9LIQ3 Ribosome-binding factor A n=7 Tax=Prevotella Rep... 105 6e-22 UniRef50_B9JYK7 Ribosome-binding factor A n=12 Tax=Rhizobiales R... 104 7e-22 UniRef50_A8J0V0 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 104 7e-22 UniRef50_C8W718 Ribosome-binding factor A n=5 Tax=Coriobacteriac... 104 8e-22 UniRef50_A6CF42 Probable ribosome-binding factor A n=1 Tax=Planc... 104 9e-22 UniRef50_C6C0D1 Ribosome-binding factor A n=2 Tax=Desulfovibrio ... 104 1e-21 UniRef50_D1AY63 Ribosome-binding factor A n=5 Tax=Fusobacteriace... 103 1e-21 UniRef50_B5W1W9 Ribosome-binding factor A n=1 Tax=Arthrospira ma... 103 1e-21 UniRef50_Q1NKW1 Ribosome-binding factor A n=1 Tax=delta proteoba... 103 1e-21 UniRef50_Q83ND3 Ribosome-binding factor A n=2 Tax=Tropheryma whi... 103 1e-21 UniRef50_C4XE44 Putative uncharacterized protein n=1 Tax=Mycopla... 103 2e-21 UniRef50_A6DGZ4 Ribosome-binding factor A n=1 Tax=Lentisphaera a... 103 2e-21 UniRef50_C1ZB80 Ribosome-binding factor A n=1 Tax=Planctomyces l... 102 3e-21 UniRef50_Q7NBZ3 Ribosome-binding factor A n=1 Tax=Mycoplasma gal... 102 4e-21 UniRef50_Q4FNM8 Ribosome-binding factor A n=3 Tax=Candidatus Pel... 102 4e-21 UniRef50_Q01W29 Ribosome-binding factor A n=1 Tax=Candidatus Sol... 102 5e-21 UniRef50_A6KYQ5 Ribosome-binding factor A n=36 Tax=Bacteria RepI... 102 5e-21 UniRef50_Q3ELJ3 Ribosome-binding factor A n=1 Tax=Bacillus thuri... 101 6e-21 UniRef50_B2UQQ2 Ribosome-binding factor A n=1 Tax=Akkermansia mu... 101 7e-21 UniRef50_D2R7W9 Ribosome-binding factor A n=1 Tax=Pirellula stal... 101 8e-21 UniRef50_Q14NW2 Putative ribosome-binding factor a protein n=1 T... 101 9e-21 UniRef50_A0M6N1 Ribosome-binding factor A n=13 Tax=Bacteroidetes... 100 1e-20 UniRef50_Q7XYI2 Ribosome-binding factor A (Fragment) n=1 Tax=Big... 100 1e-20 UniRef50_Q6F193 Ribosome-binding factor A n=1 Tax=Mesoplasma flo... 100 1e-20 UniRef50_A6LN42 Ribosome-binding factor A n=1 Tax=Thermosipho me... 100 2e-20 UniRef50_B3DXW7 Ribosome-binding factor A n=1 Tax=Methylacidiphi... 100 2e-20 UniRef50_C6X0X9 Ribosome-binding factor A n=1 Tax=Flavobacteriac... 99 5e-20 UniRef50_B0VFC2 Putative ribosome-binding factor A (RbfA-like) n... 98 1e-19 UniRef50_Q98PP7 Ribosome-binding factor A n=1 Tax=Mycoplasma pul... 97 1e-19 UniRef50_A9NF13 Ribosome-binding factor A n=1 Tax=Acholeplasma l... 97 2e-19 UniRef50_C6XFV6 Ribosome-binding factor A n=1 Tax=Candidatus Lib... 97 2e-19 UniRef50_A5IZH0 Ribosome-binding factor A n=1 Tax=Mycoplasma aga... 97 2e-19 UniRef50_C1F438 Ribosome-binding factor A n=1 Tax=Acidobacterium... 96 2e-19 UniRef50_C5JAM5 Ribosome-binding factor A n=1 Tax=uncultured bac... 96 4e-19 UniRef50_Q5PAJ6 Ribosome-binding factor A n=4 Tax=Anaplasma RepI... 95 7e-19 UniRef50_A1KMI1 Ribosome-binding factor A n=26 Tax=Actinomycetal... 95 7e-19 UniRef50_A9BI93 Ribosome-binding factor A n=1 Tax=Petrotoga mobi... 94 1e-18 UniRef50_C7PES0 Ribosome-binding factor A n=1 Tax=Chitinophaga p... 94 1e-18 Sequences not found previously or not previously below threshold: UniRef50_B6IVF9 Ribosome-binding factor A n=1 Tax=Rhodospirillum... 114 7e-25 UniRef50_B8EIA6 Ribosome-binding factor A n=7 Tax=Rhizobiales Re... 111 8e-24 UniRef50_A9WPV9 Ribosome-binding factor A n=4 Tax=Actinomycetale... 107 1e-22 UniRef50_Q2RMR9 Ribosome-binding factor A n=4 Tax=Rhodospirillac... 105 3e-22 UniRef50_B4CYQ3 Ribosome-binding factor A n=1 Tax=Chthoniobacter... 105 5e-22 UniRef50_A8TZ00 Ribosome-binding factor A n=1 Tax=alpha proteoba... 105 5e-22 UniRef50_B2S9F7 Ribosome-binding factor A n=38 Tax=Rhizobiales R... 105 6e-22 UniRef50_Q3AQK8 Ribosome-binding factor A n=11 Tax=Chlorobiaceae... 104 7e-22 UniRef50_B1ZX44 Ribosome-binding factor A n=1 Tax=Opitutus terra... 99 3e-20 UniRef50_A7HZ94 Ribosome-binding factor A n=1 Tax=Parvibaculum l... 99 3e-20 UniRef50_B7IDY7 Ribosome-binding factor A n=1 Tax=Thermosipho af... 99 3e-20 UniRef50_B1AIV9 Ribosome-binding factor A n=14 Tax=Ureaplasma Re... 99 4e-20 UniRef50_Q16CE6 Ribosome-binding factor A n=43 Tax=Rhodobacteral... 97 1e-19 UniRef50_Q2G5E9 Ribosome-binding factor A n=6 Tax=Sphingomonadal... 95 4e-19 UniRef50_B5JHK1 Ribosome-binding factor A n=1 Tax=Verrucomicrobi... 95 6e-19 UniRef50_D1N2Z1 Ribosome-binding factor A n=1 Tax=Victivallis va... 95 7e-19 UniRef50_B0T172 Ribosome-binding factor A n=7 Tax=Caulobacterace... 93 2e-18 UniRef50_A3VQI0 Ribosome-binding factor A n=1 Tax=Parvularcula b... 93 3e-18 >UniRef50_Q48E78 Ribosome-binding factor A n=11 Tax=Gammaproteobacteria RepID=RBFA_PSE14 Length = 138 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 87/135 (64%), Gaps = 4/135 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKE+ R QR+ +MQ+E+A +++REIKDPR+G + T++ V++SRD+ +AK+++T + Sbjct: 1 MAKEYSRTQRIGDQMQRELAQLIRREIKDPRVG-LVTITAVDVSRDVGHAKIFMTVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + IK L A+GF+R L + M+LR VP+L F YD S+V G +S L+ V D Sbjct: 60 SAEEIAQTIKVLNSAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAQD 119 Query: 121 ---EERRVNPDDSKE 132 +E +PD E Sbjct: 120 GQHQEGSASPDAKPE 134 >UniRef50_Q65SL1 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_MANSM Length = 131 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 87/132 (65%), Positives = 115/132 (87%), Gaps = 1/132 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M++EF R RVAQE+QKEIA+ILQRE+KDPR+G M TVS VE+SRDLAYAK++VTFL + Sbjct: 1 MSREFKRSDRVAQELQKEIAVILQREVKDPRIG-MVTVSDVEVSRDLAYAKIFVTFLFNN 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D++A+K G+KAL++A+ +IRSL+GKAMRLRIVPEL F YD SLVEGMRMSNLVT+VV+ D Sbjct: 60 DDEAIKQGMKALEKAAPYIRSLVGKAMRLRIVPELRFEYDRSLVEGMRMSNLVTNVVRSD 119 Query: 121 EERRVNPDDSKE 132 +ER ++ ++ ++ Sbjct: 120 KERHIDEENGED 131 >UniRef50_Q3KI83 Ribosome-binding factor A n=14 Tax=Proteobacteria RepID=RBFA_PSEPF Length = 133 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 89/134 (66%), Gaps = 3/134 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKE+ R QR+ +MQ+E+A +++RE+KDPR+G + T++ VE+SRD+ +AK+++T + Sbjct: 1 MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVG-LVTITAVEVSRDVGHAKIFITVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + + IK L A+GF+R L + M+LR VP+L F YD S+V G +S L+ V D Sbjct: 60 NAEDIAQSIKVLNAAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAED 119 Query: 121 EER--RVNPDDSKE 132 + P+D+KE Sbjct: 120 NQHVAAAEPEDTKE 133 >UniRef50_B7V1F5 Ribosome-binding factor A n=6 Tax=Gammaproteobacteria RepID=RBFA_PSEA8 Length = 130 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 91/133 (68%), Gaps = 3/133 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R QR+ +MQ+E+A ++QREIKDPRLG + T++GVE+SRD+A+AKV++T + Sbjct: 1 MAKDYSRTQRIGDQMQRELAQLIQREIKDPRLG-LVTITGVEVSRDVAHAKVFITVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D + ++ L +A+G++R LLGK+M+LR VP+L F YD S+ G +S L+ V D Sbjct: 60 DAGKIALNMEILNDAAGYLRMLLGKSMKLRSVPQLHFHYDESIRRGAELSALIERAVAED 119 Query: 121 EERRVNPDDSKED 133 R DD ED Sbjct: 120 GRRH--GDDETED 130 >UniRef50_Q3IJ52 Ribosome-binding factor A n=221 Tax=Gammaproteobacteria RepID=RBFA_PSEHT Length = 166 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 77/131 (58%), Positives = 100/131 (76%), Gaps = 1/131 (0%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +EF R RVAQ++QKEIA+ILQREIKDPRLG M TVS VE+SRDL+YAK+++T N +D+ Sbjct: 2 REFSRTDRVAQQIQKEIAVILQREIKDPRLG-MVTVSAVEVSRDLSYAKIFITVFNTQDD 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 +A K L EA+G+IRSLLGK +R RI+PEL F DNSL+EGMR+SNLV S+++ D Sbjct: 61 NAAKQSANVLNEATGYIRSLLGKRIRARIMPELKFLVDNSLMEGMRISNLVDSIIREDNA 120 Query: 123 RRVNPDDSKED 133 + V + ED Sbjct: 121 KHVADETDVED 131 >UniRef50_Q482T8 Ribosome-binding factor A n=2 Tax=Alteromonadales RepID=RBFA_COLP3 Length = 142 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 76/133 (57%), Positives = 98/133 (73%), Gaps = 2/133 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+E+ R RV Q++QKEIA IL REIKDPRL MTTVS VE++RDLAYAK++VTF ND Sbjct: 1 MAREYARTDRVGQQIQKEIATILMREIKDPRLS-MTTVSAVEVTRDLAYAKIFVTFFND- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ++D +KA ++ L EA G+IRSLLGK +R RI+P L F YD+S+ EG+RMS LV V D Sbjct: 59 NQDEIKASLEVLAEAEGYIRSLLGKRLRARIMPHLRFVYDSSMSEGVRMSALVDQAVASD 118 Query: 121 EERRVNPDDSKED 133 + DD++ D Sbjct: 119 KNGDAEVDDTQVD 131 >UniRef50_Q1GXD5 Ribosome-binding factor A n=3 Tax=Betaproteobacteria RepID=RBFA_METFK Length = 125 Score = 160 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 9/132 (6%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R RVA+++Q+E+A +LQ E+KDPR+ M TV+ VE+S D+++AKVY T Sbjct: 1 MVKEFSRSDRVAEQIQRELADLLQFEVKDPRVSSMVTVTEVEVSGDMSHAKVYYT----- 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K L++ +GF+RS L + + LR VP+L F YD S+ GMR++ L+ + Sbjct: 56 APQGTPELQKGLEKTAGFLRSQLARRLLLRTVPQLHFVYDASIDRGMRIAKLIDEALPP- 114 Query: 121 EERRVNPDDSKE 132 +PD E Sbjct: 115 ---VADPDQDSE 123 >UniRef50_Q5NZS0 Ribosome-binding factor A n=1 Tax=Aromatoleum aromaticum EbN1 RepID=RBFA_AZOSE Length = 127 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 55/130 (42%), Positives = 88/130 (67%), Gaps = 3/130 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R QRVA+++++E+A +++ E+KDPR+G +T ++ VE++ D A+AKV+ T + K Sbjct: 1 MPKEFSRSQRVAEQVRRELAELIRLEVKDPRVGFIT-LTDVEITPDYAHAKVFFTSM--K 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E+ + + L ASGF+R LGK +R+ +PEL F YD+S+ G RMS L+ VV+ D Sbjct: 58 GEEGLDEILTGLHRASGFLRRELGKRVRIHTLPELHFHYDSSVERGSRMSQLIDQVVRDD 117 Query: 121 EERRVNPDDS 130 + R + +S Sbjct: 118 DARHKDDPES 127 >UniRef50_B5JRR1 Ribosome-binding factor A n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRR1_9GAMM Length = 142 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 85/132 (64%), Gaps = 4/132 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R RVA ++QK++A +++ E+KDPRL T+ V ++RDL+ AK+Y+T L+DK Sbjct: 14 MAKDYPRSYRVADQIQKDLANLIRTEVKDPRLSDFVTLEEVRVTRDLSQAKIYITTLDDK 73 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ED+ L ASGF+R +LGK +RLR++P+L F YD + E R+ L+ + D Sbjct: 74 AEDSA----AVLNRASGFLRGVLGKRLRLRVIPQLHFIYDATQEEAQRIDGLIREAIASD 129 Query: 121 EERRVNPDDSKE 132 E+ + DS + Sbjct: 130 EQHHADDSDSGD 141 >UniRef50_Q0A798 Ribosome-binding factor A n=3 Tax=Ectothiorhodospiraceae RepID=RBFA_ALHEH Length = 130 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 89/133 (66%), Gaps = 5/133 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M ++F R +RV +++Q+E+A +++ E++DPRLG M TVS V +SRDLA+AKV+VT L Sbjct: 1 MPRDFPRTRRVGEQIQRELAELIRDELRDPRLG-MVTVSEVTVSRDLAHAKVFVTALGGS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DED K ++ L A+G++R LLG+ +R+R VP L F +D + G R+S L+ V+ D Sbjct: 60 DEDNAK-TVEVLTRAAGYLRKLLGQRLRIRQVPALHFQHDTAFDRGDRLSRLIDEAVEED 118 Query: 121 EERRVNPDDSKED 133 ++ DD K D Sbjct: 119 RQQH---DDDKPD 128 >UniRef50_Q18BH6 Ribosome-binding factor A n=6 Tax=Clostridium RepID=RBFA_CLOD6 Length = 126 Score = 150 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 82/131 (62%), Gaps = 5/131 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + R +R+A+E++K ++ +L +KDPR+ M +V+ VE++ DL YA VYV+ L Sbjct: 1 MA-SYNRTRRIAEEIRKVVSTMLINGVKDPRITSMVSVTDVEVTNDLRYAYVYVSILGGD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E + + L+ A G+IR +GK ++LR +PE+ F D+S+ +GM M +L+ V + + Sbjct: 60 EE----STLTGLKSAGGYIRREVGKNIKLRYIPEIVFKLDDSIEKGMYMDSLIKRVNEKN 115 Query: 121 EERRVNPDDSK 131 ++ + + + Sbjct: 116 AQQNEDENYDE 126 >UniRef50_Q5X1C4 Ribosome-binding factor A n=6 Tax=Legionella RepID=RBFA_LEGPA Length = 123 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+ F R R+A+ +Q+++ALI+ +EIKDPRL T+S V+++ DL +AK+Y T LN+ Sbjct: 1 MSNNFKRTDRIAEMIQRKLALIIPQEIKDPRLKGFVTISAVKVAADLGHAKIYFTVLNED 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 L A+ ++RS L +++ LR VP+L F YD S+ G R+S L+ V D Sbjct: 61 KS----VVTNILNGAASYLRSALARSITLRTVPQLHFIYDESIEYGQRLSRLIDEVNPPD 116 Query: 121 EERRVN 126 N Sbjct: 117 SSSDDN 122 >UniRef50_A9KNW3 Ribosome-binding factor A n=23 Tax=Bacteria RepID=RBFA_CLOPH Length = 136 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 4/133 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + R+ QE+QKE+++++ RE+KDPR+ MT++ VE++ DL AKVY++ L D Sbjct: 1 MRKNSIKNTRINQEVQKELSMLISRELKDPRINPMTSIVAVEVAPDLKTAKVYISVLGD- 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E + K + L+ A+ F+R L + + LR PEL F D S+ G+ MS L+ V + Sbjct: 60 -ELSQKNTLAGLKSAAPFLRGQLARGINLRNTPELLFVVDQSIEYGVSMSKLINEVNAGN 118 Query: 121 EERRVNPDDSKED 133 + + ++ +D Sbjct: 119 --HKASDEEESDD 129 >UniRef50_C7R7H8 Ribosome-binding factor A n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7H8_KANKD Length = 122 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 56/119 (47%), Positives = 87/119 (73%), Gaps = 1/119 (0%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RVA ++Q+++A++LQRE+KDPRLG + TVSGVE++ DL AKV+VTFL +E + Sbjct: 4 ARAKRVADQIQRDLAVLLQREMKDPRLG-IVTVSGVEVTSDLQNAKVFVTFLGKDEEQEI 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K ++ L A+GF+RS L K++R+R VP L F +D S+VEG +M++L+ + DE ++ Sbjct: 63 KQALEVLTGAAGFLRSQLAKSIRMRSVPSLRFLFDKSIVEGQKMTSLIDKAISEDESKK 121 >UniRef50_C4Z5N8 Ribosome-binding factor A n=10 Tax=Firmicutes RepID=RBFA_EUBE2 Length = 130 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 2/132 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + R+ E+ KE++ I++ EIKDPR+ MT+V VE++ DL K Y++ L D Sbjct: 1 MRKNSVKNTRINGEVLKELSNIIRSEIKDPRINPMTSVVAVEVAPDLKTCKAYISVLGD- 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E + K I L+ A G+IR L + + LR PE+ F D S+ G+ MS L+ V +HD Sbjct: 60 -EKSQKDTITGLKSAEGYIRRQLARTVNLRNTPEIRFILDQSIEYGINMSKLIDEVTEHD 118 Query: 121 EERRVNPDDSKE 132 + V +D E Sbjct: 119 NKMHVEVEDETE 130 >UniRef50_A4BAM6 Ribosome-binding factor A n=2 Tax=Gammaproteobacteria RepID=A4BAM6_9GAMM Length = 137 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 8/138 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA R +++ ++QK++++I+QRE+KDPR+G M T++ V++S DL+YA VY T + Sbjct: 1 MASNSSRIRKIGDQIQKDLSVIIQREVKDPRVG-MVTINDVKVSSDLSYADVYFTCMAFG 59 Query: 59 -----DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + E K K L A+GF+R+ L + ++LR++P+L F YD + G R+S L+ Sbjct: 60 PQSEAEAQEQERKEQEKLLNRAAGFMRTQLAQGLKLRVIPQLRFHYDVVIETGARVSQLI 119 Query: 114 TSVVKHDEERRVNPDDSK 131 + D++R D Sbjct: 120 DEAREQDQKRSGQEQDED 137 >UniRef50_A4IMD9 Ribosome-binding factor A n=50 Tax=Firmicutes RepID=RBFA_GEOTN Length = 128 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 45/125 (36%), Positives = 76/125 (60%), Gaps = 3/125 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV ++M+KE++ I+ R++KDPR+G +T V+ V ++ DL AKVY++ D ++ + Sbjct: 4 RATRVGEQMKKELSDIIGRKLKDPRIGFVT-VTDVRVTGDLQQAKVYISVFGDDEQR--E 60 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 +KAL++A GFIRS +G+ +RLR PE+ F D ++ G R+ L+ + D Sbjct: 61 NTLKALEKAKGFIRSEIGQRIRLRKTPEILFEIDETIEYGSRIERLIRQISDEDGRDSEE 120 Query: 127 PDDSK 131 +D Sbjct: 121 VNDEP 125 >UniRef50_Q21H62 Ribosome-binding factor A n=1 Tax=Saccharophagus degradans 2-40 RepID=RBFA_SACD2 Length = 128 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R R+A +Q+ +A ++Q E++DPRLG + ++ V+++RDL+ AKVYVT + K Sbjct: 1 MPREFFRSDRIADAIQRSLARVIQTEVRDPRLG-LVNINSVDVTRDLSIAKVYVTVVGAK 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E + +K L +A+GF+R+++ K + +R P L+FFYD + V+G +SNL+ V D Sbjct: 60 EESESEVAVKVLNKAAGFLRNVIAKELTMRSAPRLSFFYDRTAVQGQNLSNLIDRAVAAD 119 Query: 121 EERRVNPDD 129 ++R + + Sbjct: 120 KQRSEDEGE 128 >UniRef50_Q3J9B7 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_NITOC Length = 127 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 82/132 (62%), Gaps = 5/132 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M++EF R +RV + +Q+E+A + Q E+KDPR+ + TVS V +S DL AK YVTFL Sbjct: 1 MSQEFSRARRVGELLQRELARLFQEELKDPRVK-LVTVSHVRVSPDLRQAKAYVTFLG-- 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E+ + + L +A+GF++ L + + LR++P L F YD+S+ G R+S L+ V+ Sbjct: 58 KEEDTQEQLAVLNKAAGFLQHGLSQRVELRVIPRLQFVYDDSIERGRRLSALIDKAVQ-- 115 Query: 121 EERRVNPDDSKE 132 +E D+S E Sbjct: 116 KETDGESDNSTE 127 >UniRef50_B8D9G1 Ribosome-binding factor A n=4 Tax=Buchnera aphidicola RepID=RBFA_BUCA5 Length = 120 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 53/120 (44%), Positives = 84/120 (70%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K F R R+AQE+QK+IA I+Q +KDPR+ + TVS V++S+DL+YA+++V+FL Sbjct: 1 MEKLFNRSDRIAQELQKKIAAIIQHSLKDPRIKTIITVSEVQVSKDLSYAQIFVSFLESD 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + VK I L AS +IR LL K M+LRIVP + F +D+S ++G ++S ++ ++ K + Sbjct: 61 NNEKVKKKITILNRASSYIRKLLCKRMKLRIVPNIIFHHDDSFLKGNKISCILENLTKKE 120 >UniRef50_C5BPV8 Ribosome-binding factor A n=9 Tax=Proteobacteria RepID=RBFA_TERTT Length = 132 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 1/133 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R RVA MQ+ +A ++ EI+DPR+G M ++ VE+SRDLA AKV+VTF+ Sbjct: 1 MPKEFNRSDRVADAMQRSLANAIRMEIQDPRVG-MVNINAVEVSRDLALAKVFVTFIGVD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE A++ + L +A+GF+R+++ K + +R P + F+YD + V G +S+L+ + D Sbjct: 60 DERAIETSVSILNKAAGFLRNVVSKDLTIRSTPRIHFYYDKTAVRGQVLSSLIDRAIAED 119 Query: 121 EERRVNPDDSKED 133 + + +E+ Sbjct: 120 KSHHQDDAGQEEE 132 >UniRef50_C2KV11 Ribosome-binding factor A n=1 Tax=Oribacterium sinus F0268 RepID=C2KV11_9FIRM Length = 138 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 77/127 (60%), Gaps = 2/127 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + QR +++++ ++L+++ E+KD R+ V+GV+++ DL Y KV+V+ L + Sbjct: 1 MKKLSFKNQRRNEDVRRCLSLLIREEVKDSRVSPFCDVTGVDLTPDLQYCKVFVSCLGSE 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E + I+ L+ A GF+R L ++ LR PEL F D+S+ G RM L++ V K D Sbjct: 61 EE--LGKTIEGLKAAGGFLRRELAGSLNLRHTPELQFIADHSVEYGSRMDALISQVSKED 118 Query: 121 EERRVNP 127 +ER V Sbjct: 119 KERAVGE 125 >UniRef50_A4XL69 Ribosome-binding factor A n=15 Tax=Firmicutes RepID=RBFA_CALS8 Length = 135 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 86/132 (65%), Gaps = 3/132 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +F R RVA+E++KEI+ I+Q E+KDPR+ + ++ V MS+DL +AKV+V+ DK+ Sbjct: 2 QFERADRVAEEIKKEISDIIQHELKDPRICAELISIVKVNMSKDLRHAKVFVSIF-DKNR 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDE 121 + + + +KAL+ A +IR + + + LR PE++F D+S+ G R+S ++ + + DE Sbjct: 61 ENITSTMKALENAKPYIRREISRRINLRFSPEISFELDDSIEYGARISQILNQLNIAKDE 120 Query: 122 ERRVNPDDSKED 133 E + D+S+ + Sbjct: 121 EEEKSQDESEGE 132 >UniRef50_B2A398 Ribosome-binding factor A n=9 Tax=Firmicutes RepID=RBFA_NATTJ Length = 131 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 50/130 (38%), Positives = 85/130 (65%), Gaps = 7/130 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ +E++K I+ ILQRE+KDP +G +T V+ V++S DL +AKV+V+ L +++ + Sbjct: 5 RKEKLQEELKKIISDILQREVKDPSVGFVT-VTSVDLSGDLRHAKVFVSILG--EKENQQ 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV----KHDEE 122 ++ L++A+GFIRS LGK +RLR VPE+ F +D S+ G ++ L+ + D E Sbjct: 62 DSLRGLEKATGFIRSELGKRVRLRHVPEIVFKFDESIEHGDHINKLLKQMNLGEDNEDNE 121 Query: 123 RRVNPDDSKE 132 + N D +E Sbjct: 122 DKENNDPGEE 131 >UniRef50_Q1K0G2 Ribosome-binding factor A n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0G2_DESAC Length = 119 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 4/118 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RVA+++ KEI+ I+ R ++DPR+G +T ++ V++S DL +AK++ T + +E + Sbjct: 5 RTYRVAEQIHKEISDIMLRGLRDPRVGFVT-ITSVDISSDLRHAKIFFTVMG--EEADAE 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDEER 123 + L A F+R LGK M+LR VP+L F YD S+ G + L+ + HD++ Sbjct: 62 KTQQGLDSAVPFLRRELGKRMKLRHVPDLVFKYDTSIAYGSHIEELLKEAGITHDDDE 119 >UniRef50_B3PI97 Ribosome-binding factor A n=1 Tax=Cellvibrio japonicus Ueda107 RepID=RBFA_CELJU Length = 136 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 2/132 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R RV+ +Q+ +A ++ +E++DPRLG M ++ V +SRD+A+AKVYVTF+ Sbjct: 1 MPREFTRSDRVSDAIQRLLAQVIPQEVRDPRLG-MVNINAVAVSRDMAFAKVYVTFVGVT 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE GI L +ASGF+RS + + + +R VP+L F YD + + G +S+L+ + D Sbjct: 60 DEPKSLEGIGILNKASGFLRSFVARELSMRTVPKLQFIYDKTSIRGQELSSLIDRAIAED 119 Query: 121 EERRVNPDDSKE 132 D + + Sbjct: 120 R-LHPQGDQTDD 130 >UniRef50_D0L0S5 Ribosome-binding factor A n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0S5_HALNC Length = 139 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 82/131 (62%), Gaps = 4/131 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + F R QRVA+++++EIA +L+ EI+ + ++T V+ E++RDL YAK++ + LN Sbjct: 1 MPQGFSRHQRVAEQIRREIADLLREEIRQAGISLLT-VTDCEVTRDLGYAKIFYSVLNSS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + +A L A+GF+R+ L MRLR VP LTF +D S+ GM+M L+++V K D Sbjct: 60 ERERAQAW---LDSAAGFLRTELAHRMRLRSVPRLTFQFDASIERGMQMDALISAVRKQD 116 Query: 121 EERRVNPDDSK 131 +E D Sbjct: 117 DEHVQTDDADD 127 >UniRef50_A6T0Y7 Ribosome-binding factor A n=3 Tax=Betaproteobacteria RepID=RBFA_JANMA Length = 128 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 6/122 (4%) Query: 1 MAKEFG----RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF 56 MAK R RVA ++Q++++ I+ E+KDPR+G M T++ V+++ D A+AKV+ T Sbjct: 1 MAKHSKSIPGRGLRVADQIQRDLSEIIAFELKDPRVG-MITITEVQVTPDYAHAKVFFTM 59 Query: 57 LNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 L+DK +D +K + L ASG+IR LG+ + + +PEL F +D S G+ MS L+ Sbjct: 60 LSDK-KDDIKNTVSGLTAASGYIRGQLGRRLTIHTLPELHFVHDTSTARGIEMSKLIDEA 118 Query: 117 VK 118 Sbjct: 119 NA 120 >UniRef50_C7RU80 Ribosome-binding factor A n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RU80_9PROT Length = 136 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 + F R R+A+++++E+A +++ E++DPR+G M +++ V++S D A+AKV+ + L ++ Sbjct: 5 RGFARRDRIAEQIRRELAELIRTELRDPRVG-MISLTEVQVSADYAHAKVFFSTLAGSEQ 63 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + A LQ A GF+R LGK + + PEL F +D SL G ++S L++ V E Sbjct: 64 --LDAVYAGLQHAGGFLRRELGKRISIHATPELHFVFDASLEHGAQLSKLISEAVAISEH 121 Query: 123 RRVNPDDSKED 133 + D Sbjct: 122 SSPADQAPEAD 132 >UniRef50_Q057K0 Ribosome-binding factor A n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=RBFA_BUCCC Length = 116 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 54/116 (46%), Positives = 83/116 (71%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K+F R R+ + + KEIA+I+Q+ ++DPRL T++ V++S DL+YAKV++TFLN Sbjct: 1 MLKDFSRSMRLERSLYKEIAVIIQKNLRDPRLNSFITITEVKLSYDLSYAKVFITFLNYD 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D+ +K + LQ A+G+IRSLL K + LRIVP+L F YD SL+ G+ +S L+ ++ Sbjct: 61 DKKNIKIILGILQNATGYIRSLLNKKIYLRIVPKLFFVYDTSLINGIFISELIKNI 116 >UniRef50_B1I386 Ribosome-binding factor A n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I386_DESAP Length = 119 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 4/118 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M RP+R+A+ ++KEI+ +L R++KDPRLG +T V+ VE+S DL YAKV+V+ L Sbjct: 1 MGPVIFRPERLAEVIKKEISDLL-RQMKDPRLGFVT-VTAVEVSSDLRYAKVFVSVLGSN 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 ++ A +K L+ A GFIR+ LGK +RLR PE++F +D S+ EG R+ ++ + K Sbjct: 59 EDQ--DASLKVLRGAQGFIRTELGKRIRLRYTPEVSFVHDPSIEEGTRIIQIIRDIGK 114 >UniRef50_A1U5Z9 Ribosome-binding factor A n=7 Tax=Gammaproteobacteria RepID=RBFA_MARAV Length = 143 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 84/135 (62%), Gaps = 5/135 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+E+ R R+ +MQ+E+A ++QRE+KDPR+G M TV+ V++SRDL YA +Y++ L+ + Sbjct: 1 MAREYSRVDRIGDQMQRELAQLIQREVKDPRVG-MVTVNDVKVSRDLGYADIYISLLSTE 59 Query: 61 ----DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D V+ + L +ASGF+R +G+AM+LR+VP L F +D L + +M L+ Sbjct: 60 ELTEDSPEVQDSLTVLNKASGFLRGQVGRAMKLRVVPHLRFHFDKLLGQSRKMDRLIREA 119 Query: 117 VKHDEERRVNPDDSK 131 V + +D Sbjct: 120 VGDKPAVPRDDNDDP 134 >UniRef50_Q0VSS0 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_ALCBS Length = 137 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 75/129 (58%), Gaps = 2/129 (1%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 + F R RVA ++Q+E++ +LQ E+KDPR+ + T+ V +SRDL+YA+VY T L + Sbjct: 7 PQGFNRTDRVADQIQRELSRLLQFEMKDPRVN-LATIQDVTVSRDLSYAEVYFTLL-GQG 64 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 E+A + L +ASGF+RS L + + R P+L F YD + +S L+ D Sbjct: 65 EEAGAEAEEVLTKASGFLRSSLAQGLNTRTTPKLRFHYDMTPERAAHLSQLIDEARAEDR 124 Query: 122 ERRVNPDDS 130 E R D++ Sbjct: 125 ELRPEDDET 133 >UniRef50_B8JFY8 Ribosome-binding factor A n=4 Tax=Anaeromyxobacter RepID=RBFA_ANAD2 Length = 139 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 11/137 (8%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 RP RVA+E + E++ IL R +KDPR+ TV+G +MS DL A VYV+ D E Sbjct: 5 NRPARVAEEFRHELSAILARGLKDPRITGFVTVTGSKMSPDLKEATVYVSIHGD--ERVR 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH------ 119 K LQ A+GF++ + +A+RLR P L F YD S+ G R+ L+ Sbjct: 63 KDTFAGLQAAAGFLQREVSRALRLRNTPHLRFVYDESVARGDRIERLLREARTQGQAAPA 122 Query: 120 ---DEERRVNPDDSKED 133 + PDD E+ Sbjct: 123 PDVEPAPGAAPDDEAEE 139 >UniRef50_Q74CT2 Ribosome-binding factor A n=1 Tax=Geobacter sulfurreducens RepID=RBFA_GEOSL Length = 118 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 70/116 (60%), Gaps = 3/116 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 F R ++VA+ + + ++ ++ + +KDPR+G +T ++GV+++ D+ A +Y T + D +A Sbjct: 2 FNRSEKVAEAIHELVSGLIVKGMKDPRIGFIT-ITGVKVTDDIRQATIYYTVMGDD--EA 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + L A+GF+R +GK +RL+ PEL F YD S+ G R+ L+ + Sbjct: 59 RVSTARGLASATGFLRREIGKQLRLKFAPELHFKYDQSIEYGNRIDQLLKEIETEK 114 >UniRef50_A0LE17 Ribosome-binding factor A n=1 Tax=Magnetococcus sp. MC-1 RepID=RBFA_MAGSM Length = 123 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 6/123 (4%) Query: 7 RPQRVAQEMQKEIALILQR-EIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RV ++KE+A +L R EIKDPRLG + V +S DL+YAKVY T + D+ V Sbjct: 4 RTERVGNAIRKEVASMLTRGEIKDPRLGGFVNIQEVRVSPDLSYAKVYYTVFGESDQAGV 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT--SVVKHDEER 123 Q ASGF+R+++ K ++LR PEL F D+ R+ L+ + D+ Sbjct: 64 ADAW---QRASGFLRNVIAKRLKLRHAPELRFELDHVADYSKRIDELLNGLEIPPADDSD 120 Query: 124 RVN 126 + Sbjct: 121 ETH 123 >UniRef50_Q1YSY1 Ribosome-binding factor A n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSY1_9GAMM Length = 142 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 87/135 (64%), Gaps = 3/135 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R +RV+ +Q+E+A +++ E++DPR+G M V+ V++SRDLAY KV+V F+ D+ Sbjct: 1 MPREFTRAERVSDSVQQELATLIRSEVRDPRVG-MVNVTEVQISRDLAYGKVFVNFVGDR 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +++ + + AL ASG++R LLG +++LRIVP+L F +D + G +S L+ + + Sbjct: 60 EQEQIDEAMAALNGASGYLRKLLGASIQLRIVPKLNFIFDETGRRGQHLSALIDLAISKE 119 Query: 121 --EERRVNPDDSKED 133 + D +D Sbjct: 120 MPADDAGQQDTDPKD 134 >UniRef50_A4J5X1 Ribosome-binding factor A n=1 Tax=Desulfotomaculum reducens MI-1 RepID=RBFA_DESRM Length = 120 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 79/116 (68%), Gaps = 3/116 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 RP+RVA+ ++KE+A +++ +IKDPR+G +T ++GVE++RDL++AK++++ + Sbjct: 2 SHRPERVAEAIKKEVADLIRNDIKDPRIGFVT-ITGVEVTRDLSFAKIFISVMGSDAHR- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + LQ+++G++RS +G+ ++LR PEL F D SL G R++ ++ + + Sbjct: 60 -QETLSILQKSAGYMRSEIGRRIKLRHAPELIFKLDTSLDHGTRIAEILHEINSQE 114 >UniRef50_B9KZ59 Ribosome-binding factor A n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RBFA_THERP Length = 129 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 77/126 (61%), Gaps = 3/126 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+A+ ++ EIA I+QRE++DPRLG + +V+ VEMS DL +AKV+V+ +E + Sbjct: 5 RQARLAEFLRDEIAAIIQRELRDPRLGFV-SVTRVEMSPDLRHAKVFVSIYGSHEEQ--E 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 A ++ALQ A+GFIR L+ + R +PEL F D SL +++ L+ + + + Sbjct: 62 AALEALQGAAGFIRRLIAPHLHTRHIPELHFKLDRSLEHAEQVARLLRQIQQERQRDESA 121 Query: 127 PDDSKE 132 + + E Sbjct: 122 VESTPE 127 >UniRef50_C5RLI4 Ribosome-binding factor A n=2 Tax=Clostridium RepID=C5RLI4_CLOCL Length = 127 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ +EM+K+I+ +++ ++DPRL M +V+ V++++DL YAKVYV+ E Sbjct: 5 RSEKINEEMKKQISDVIRNRVRDPRLAPMISVTSVDVTKDLKYAKVYVSIFGSDTEK--D 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 +K L+ +SGFIR + + LR PEL F D S+ GM + L+ S+ + E + Sbjct: 63 ESLKILKNSSGFIRREVASKINLRSTPELLFNLDTSIEYGMHIDRLIHSI--KENEDNGD 120 Query: 127 PDDSKED 133 D++E+ Sbjct: 121 ESDTEEN 127 >UniRef50_Q1MZS3 Ribosome-binding factor A n=1 Tax=Bermanella marisrubri RepID=Q1MZS3_9GAMM Length = 129 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 46/130 (35%), Positives = 81/130 (62%), Gaps = 5/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R QR+ +++++E+A +LQ ++KDPRLG + T++ V+++ DL YA +Y T + Sbjct: 1 MAKDYSRTQRLGEQIKRELAHMLQFDVKDPRLG-IVTLNAVKVASDLGYADIYFTVMKSG 59 Query: 61 ----DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D++ V + L + SGF+R+ L + +R RI P+ F YD +L G +++NL+ Sbjct: 60 MVEADDETVAETEQILNDMSGFLRTELSQILRTRITPQPRFHYDVALERGHKLTNLINQA 119 Query: 117 VKHDEERRVN 126 VK D+ Sbjct: 120 VKSDKREDDQ 129 >UniRef50_Q2RJM4 Ribosome-binding factor A n=5 Tax=Bacteria RepID=RBFA_MOOTA Length = 122 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 50/117 (42%), Positives = 73/117 (62%), Gaps = 3/117 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R QRVA+EM+KEIA I++ E+KDPRL + +V+GVE+S D YAKVYV+ D E+ Sbjct: 4 TARNQRVAEEMKKEIARIIRDEVKDPRLEAGLVSVTGVELSNDRHYAKVYVSIYGD--EE 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 A ++ L A+ FIR +G+ + LR PE+TF D S+ G ++ L+ V + Sbjct: 62 ARNQAMEGLARATSFIRREIGQRLSLRYTPEITFKLDVSIEHGDHINRLLARVRAGE 118 >UniRef50_B0CDK8 Ribosome-binding factor A n=10 Tax=Cyanobacteria RepID=RBFA_ACAM1 Length = 138 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 6/128 (4%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RVA+ +++E++ +L IKD R+G M +V+ V++S DL +AK++V+ +A Sbjct: 5 RRVSRVAELIKREVSQMLLHSIKDDRVGSGMISVTAVDLSGDLQHAKIFVSIYGTD--EA 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + L+ A+G++R LG + LR PE+ F D S EG ++ +L+ + D ER+ Sbjct: 63 RAETMAGLESATGYVRKQLGHRIHLRRTPEVIFCEDRSFEEGNQVLSLLHKL---DHERQ 119 Query: 125 VNPDDSKE 132 P S E Sbjct: 120 NKPAASTE 127 >UniRef50_A5WBS6 Ribosome-binding factor A n=19 Tax=Moraxellaceae RepID=RBFA_PSYWF Length = 140 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 5/132 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV- 65 R QR+ ++Q+E+A++++ ++ DPRL T+S V++S DL YA VYVT + + DA+ Sbjct: 4 RLQRLGDQIQRELAVLIRDDVNDPRLTGFVTISSVKVSSDLGYADVYVTIMEPELNDAMS 63 Query: 66 ----KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + +K L +A+GF+R+ L +++ R P L F YD G M +L+ V E Sbjct: 64 KHSHEESLKVLNKAAGFLRTELSHSLKTRTTPRLRFHYDEVTARGNYMMDLINKAVTKTE 123 Query: 122 ERRVNPDDSKED 133 + + D + D Sbjct: 124 QTSADDDADRLD 135 >UniRef50_C0QHM3 Ribosome-binding factor A n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=RBFA_DESAH Length = 119 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 3/121 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K + R +RVA +Q+ ++ +++++++DPR+ + T+S V ++ DL A VY + D E Sbjct: 2 KPYPRSERVAARIQEILSDLIKKKVQDPRIE-LVTISSVRLTSDLRIAYVYFSVFGD--E 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 V+ + L+ + GFI+ + + LR +PEL F +D S G M L+ SV+K D+ Sbjct: 59 ARVEEATQGLKSSHGFIKRHVASQLGLRYMPELKFIHDQSFDRGTHMDQLLKSVLKGDDS 118 Query: 123 R 123 Sbjct: 119 E 119 >UniRef50_C0WBC7 Ribosome-binding factor A n=1 Tax=Acidaminococcus sp. D21 RepID=C0WBC7_9FIRM Length = 119 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 73/124 (58%), Gaps = 5/124 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K R +++ +++E++ +L RE+KDPR+ +T ++GVE++ +L+YAK+YV+ Sbjct: 1 MSK--LRAEKLQALIKQELSNMLLREVKDPRVKFVT-ITGVEVTNELSYAKIYVSLYGS- 56 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E + K LQ G+ R+ + K ++LR+ P L+F D S+ + +++ + + + Sbjct: 57 -EKQQEEAWKGLQSCLGYFRTEIAKRIKLRMAPHLSFHKDTSMEYSAHIESILKEIKEKE 115 Query: 121 EERR 124 + Sbjct: 116 DHHE 119 >UniRef50_C8W4P3 Ribosome-binding factor A n=3 Tax=Clostridia RepID=C8W4P3_DESAS Length = 119 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 48/119 (40%), Positives = 81/119 (68%), Gaps = 3/119 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 RP+R+A+ ++KE++ ++ E+KDPR+G T+++ VE+SRDL++AK++V+ L ++E Sbjct: 3 HRPERLAESIKKEVSDMIINELKDPRIG-FTSITSVEVSRDLSFAKIFVSVLGTEEEQ-- 59 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 KA ++AL A+GFIR+ +G+ +RLR VPEL F D S+ G ++ L+ V E Sbjct: 60 KATVEALSRANGFIRAEIGRRIRLRHVPELAFISDQSIAHGTKIMKLLQDVQVQGEGMH 118 >UniRef50_A7X1Q2 Ribosome-binding factor A n=133 Tax=Bacillales RepID=RBFA_STAA1 Length = 116 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 47/118 (39%), Positives = 76/118 (64%), Gaps = 3/118 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R +RV ++M+KE+ I+ ++KDPR+G +T ++ V ++ DL+ AKV++T L + E Sbjct: 2 SSMRAERVGEQMKKELMDIINNKVKDPRVGFIT-ITDVVLTNDLSQAKVFLTVLGNDKE- 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 V+ KAL +A GFI+S LG MRLRI+PEL + YD S+ G ++ ++ + K D Sbjct: 60 -VENTFKALDKAKGFIKSELGSRMRLRIMPELMYEYDQSIEYGNKIERMIQDLHKQDR 116 >UniRef50_Q2LWT9 Ribosome-binding factor A n=2 Tax=Syntrophobacterales RepID=RBFA_SYNAS Length = 123 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 3/119 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 +F R RVA ++ EIA IL R I+DPR+ +T V+GV++S DL A+++ + ++ Sbjct: 3 QFKRADRVADLVKMEIADILLRRIRDPRVSRLT-VTGVKVSDDLRTARIFFVEMG--EDS 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 ++ LQ+A GFIR LGK ++LR VP+L F D+S G R+ L+ + + +E Sbjct: 60 CHPETLEGLQKAGGFIRKELGKRLKLRYVPDLIFKPDSSFAYGSRIDQLINEIHREEEN 118 >UniRef50_A1HSB5 Ribosome-binding factor A n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSB5_9FIRM Length = 117 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 70/116 (60%), Gaps = 3/116 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ + +++E++ I+ E+KDPR+G +T V+ VE+S DL YAK++++ + +E A Sbjct: 5 RVEKIQEFIKQEVSKIILTELKDPRIGFVT-VTRVEVSGDLRYAKIFLSLMGSDEEKA-- 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 L A G+IR+ +GK + +R VPEL+ D SL R+ L+ + + + Sbjct: 62 GTWAGLHRALGYIRTEIGKHLGIRHVPELSLHLDESLQYSARIQELLNKIKHEESQ 117 >UniRef50_B5YEH6 Ribosome-binding factor A n=2 Tax=Dictyoglomus RepID=RBFA_DICT6 Length = 120 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 45/118 (38%), Positives = 74/118 (62%), Gaps = 2/118 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R++ +++EI+ IL R +KDPR+ ++ V+MS+DL YA +YV+ ++E K Sbjct: 4 RQERLSALIREEISEILLRRVKDPRISSFLVITEVKMSKDLRYAHIYVSVYGSEEEK--K 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 ++ L+ A GFIRS LGK +R+R VPE+ F D+SL +G R+ + + DE+ Sbjct: 62 QTMQGLESAKGFIRSELGKDLRIRFVPEIFFELDDSLEKGDRILRKLKELGLEDEQDS 119 >UniRef50_B9M1G1 Ribosome-binding factor A n=8 Tax=Desulfuromonadales RepID=RBFA_GEOSF Length = 123 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 74/124 (59%), Gaps = 3/124 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 F R ++VA+ + + ++ +L + +KDPR+G +T ++GV+++ D+ A +Y T + +E Sbjct: 2 FKRSEKVAEAVHELVSELLVKGLKDPRIGFVT-ITGVKVTDDMHLATIYFTVIGSDEEK- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 KA + L A GFIR +GK+ R+R VP++ F YD S+ G R+ +++ + + + Sbjct: 60 -KATEQGLNSARGFIRKEMGKSFRMRYVPDIVFKYDASVEYGSRIESILKEIGSPEHDDN 118 Query: 125 VNPD 128 + Sbjct: 119 DKEN 122 >UniRef50_B8FCY7 Ribosome-binding factor A n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=RBFA_DESAA Length = 123 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 3/125 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K GR RVA +Q+E++ ++Q+ I DPRL T++GV+M++DL A+VY +E Sbjct: 2 KSIGRQDRVAGRIQQELSALIQKRINDPRLE-WATITGVKMTKDLKIARVYYCVFG--EE 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + +A Q+A GFI+ L K + LR +PEL FF+D S G ++ +++ + D Sbjct: 59 EKKIKVGEAFQQAHGFIKRELAKKLGLRYMPELEFFFDESFDYGRKIESILREIGPLDSP 118 Query: 123 RRVNP 127 Sbjct: 119 EEPEE 123 >UniRef50_A6TRK6 Ribosome-binding factor A n=2 Tax=Alkaliphilus RepID=RBFA_ALKMQ Length = 138 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 83/128 (64%), Gaps = 2/128 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + R R+A+E++K I+ +++ +++DPR+ MT++ V ++RDL +A +Y++ L D+ E Sbjct: 6 YPRVNRLAEEIKKIISHMIRNDLRDPRIAKMTSIIEVNVTRDLRFATIYISVLGDQQEK- 64 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + I+ L+++SGFIR +G+ + R PEL F D S+ G+ M ++++ V + D + + Sbjct: 65 -EETIEGLKKSSGFIRKEVGRQITARFTPELIFKLDESIERGVYMYDVISKVTQKDMDEK 123 Query: 125 VNPDDSKE 132 N D+ ++ Sbjct: 124 KNSDEKRD 131 >UniRef50_A9AV50 Ribosome-binding factor A n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AV50_HERA2 Length = 126 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 7/133 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK R ++VA+E++ ++ +Q EI+DPRLG +T ++ V +S DL +A + V+ + D Sbjct: 1 MAKN-KRVEQVAEEIKTILSNAIQFEIQDPRLGFVT-LTSVNVSPDLYHANINVSVMGDD 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 A K + L A GF+R LG+ M+LR VPEL F D ++ M L V D Sbjct: 59 --TARKDSLATLDRAKGFLRRELGQQMKLRAVPELHFHLDVTIDTRQYMDTLFNQV---D 113 Query: 121 EERRVNPDDSKED 133 EERRVNP ++ Sbjct: 114 EERRVNPPKLDDE 126 >UniRef50_B2GBN8 Ribosome-binding factor A n=86 Tax=Lactobacillales RepID=RBFA_LACF3 Length = 120 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 72/121 (59%), Gaps = 2/121 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + R +R+AQ++Q+E+ IL + ++DPR+ +T V+GV+++ DL A +Y T L+ Sbjct: 1 MPNKQFRVERLAQQIQREVDDILLKRVRDPRVNGVT-VTGVDVTGDLQQATIYYTILSKL 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DA + L +A+G +RS LG + + PE+ F D S+ G R+ L+ + K++ Sbjct: 60 ASDA-EKTQTGLDKATGLVRSELGSRLNIFKAPEIKFVRDPSIEYGSRIDELLNELHKNN 118 Query: 121 E 121 E Sbjct: 119 E 119 >UniRef50_UPI0000E0F5A5 ribosome-binding factor A n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F5A5 Length = 144 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 4/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKD--PRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 MA+EF R RV+Q++ KEIA IL +E K P L M TVSGVE+SRDLA+AKVYVTFL Sbjct: 1 MAREFSRTDRVSQQVHKEIASILNQEFKHQAPEL-CMVTVSGVEISRDLAHAKVYVTFL- 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + DE+ VKA + L+E GF+R LL + +R+R P L F D S+ EGMR+SN+V+ V + Sbjct: 59 EMDEEKVKASMALLEEGKGFVRGLLSRRVRMRNTPALKFIQDRSITEGMRISNIVSQVTR 118 Query: 119 HDEERRVNPD 128 +E +R + Sbjct: 119 DEEAKRGDSP 128 >UniRef50_A7BQM5 Ribosome-binding factor A n=1 Tax=Beggiatoa sp. PS RepID=A7BQM5_9GAMM Length = 122 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 79/124 (63%), Gaps = 7/124 (5%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 KEF R QR+ ++Q+E+A I++REI +P LGM+T VS +++S DL YA+VY+T L ++ Sbjct: 2 KEFSRTQRLGVQIQRELADIIRREIVNPHLGMLT-VSSIDLSPDLKYARVYMTVLG--EQ 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV----K 118 VK I+ L + +G +R L + + R P L F +DNS+ E R+S L+ S+ K Sbjct: 59 QGVKYTIQHLNQVAGRLRYHLSQRLTTRTTPRLKFVHDNSIEESSRLSALINSLAPNRTK 118 Query: 119 HDEE 122 D+E Sbjct: 119 EDDE 122 >UniRef50_B0TQA1 Ribosome-binding factor A n=43 Tax=Gammaproteobacteria RepID=RBFA_SHEHH Length = 142 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 70/126 (55%), Positives = 101/126 (80%), Gaps = 2/126 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKEF R +R+AQ++Q+E+A +LQR++KDPR+G +T V+ V++SRDL+YAKVYVTF ++ Sbjct: 1 MAKEFSRTRRIAQQLQQELAQVLQRDMKDPRIGFVT-VNDVDVSRDLSYAKVYVTFF-EE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE V+ + AL A+G+IRSL+ M+LR++PEL F YD+SLVEGMRMSNLV+ V+ +D Sbjct: 59 DEKLVEQKVAALDAAAGYIRSLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVSRVISND 118 Query: 121 EERRVN 126 E ++ Sbjct: 119 EAKQKQ 124 >UniRef50_C2BHN3 Ribosome-binding factor A n=3 Tax=Anaerococcus RepID=C2BHN3_9FIRM Length = 127 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 6/131 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM--MTTVSGVEMSRDLAYAKVYVTFLN 58 M K R R++ E+++EI+ I+ ++ DPRL M +V+ VE++ DL+YA +Y++ L Sbjct: 1 MNK--KRTARISSEVKREISKIIMDDLNDPRLSAEAMVSVTDVEVTNDLSYADIYISVLG 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D ++AL +A G+I+ L+G+ MRLR +PE F +DNS+ G M L+ + Sbjct: 59 DN--KTKDGVMEALNQAKGYIKILIGERMRLRSMPEFRFKFDNSIEHGAYMDKLIAETIA 116 Query: 119 HDEERRVNPDD 129 D++ +D Sbjct: 117 KDKKANEARED 127 >UniRef50_Q31GK4 Ribosome-binding factor A n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RBFA_THICR Length = 121 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 2/122 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +E RP RVA E++K + IL R+ KDPRL + ++ ++S+DL+ A VY T + Sbjct: 1 MNEEVSRPTRVALEIRKTLMEILHRDTKDPRLEKV-NITECKISKDLSIATVYFTIIGVN 59 Query: 61 DEDA-VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 ++D + IKAL++A GF RS +GK M LRI PE+ FFYD + L+ + Sbjct: 60 EKDQPAQDAIKALEKAKGFFRSEIGKRMNLRITPEVRFFYDTVAENASHIEELIFKALHQ 119 Query: 120 DE 121 + Sbjct: 120 KK 121 >UniRef50_D1VSB2 Ribosome-binding factor A n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSB2_9FIRM Length = 118 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 78/118 (66%), Gaps = 2/118 (1%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 + R ++++E+++ + I+Q +IKDPR+ +T++S VE++RDL++AKVYV+ D + Sbjct: 2 DNKRINKISEEVKRCLMDIVQNKIKDPRIPTLTSISHVEVTRDLSFAKVYVSIFADDIKK 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + ++ L+ A GFI+ L + ++LR++PEL F D+S+ +G++M L+ V + Sbjct: 62 --QKALQGLESAKGFIKKELAREVKLRVMPELIFINDDSIEKGLKMDKLINEVNHGKK 117 >UniRef50_D1BM61 Ribosome-binding factor A n=8 Tax=Veillonellaceae RepID=D1BM61_VEIPT Length = 118 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 71/115 (61%), Gaps = 3/115 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ + +++E++ +L R +KDPR+G TT++ V ++ DL A +YV+ E + Sbjct: 5 RVRKLQEFIKQEVSQMLMRGLKDPRIG-FTTITDVHVTGDLREATIYVSLFGSDKEK--Q 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + AL+ A+G IR+ LGK ++LR +P +TF D SL M + +L+ + K +E Sbjct: 62 DTLIALKHAAGHIRTELGKVLKLRHIPSITFDKDTSLDYSMHIESLLNEIKKDEE 116 >UniRef50_Q2JW85 Ribosome-binding factor A n=18 Tax=Cyanobacteria RepID=RBFA_SYNJA Length = 149 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 3/124 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RVA+ +++E++ IL EIKD R+G M ++ VE+S DL A+++V+ D E A Sbjct: 5 RRVARVAELIKREVSQILLSEIKDDRVGAGMVSIVDVEVSNDLQNARIFVSIYGD--EAA 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + ++ L A+ F+R +G+ + LR VP + F D SL G R+ L+ + + E ++ Sbjct: 63 QQQTMEGLASATPFVRREIGQRLGLRRVPTVVFLQDRSLERGSRVLALLNQLRQPAEAQQ 122 Query: 125 VNPD 128 Sbjct: 123 QEGS 126 >UniRef50_Q1LSK9 Ribosome-binding factor A n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=RBFA_BAUCH Length = 134 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 5/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA + R +R+A E+QK+I + LQ I+DPRL TT+S V +S DL A V+V F Sbjct: 1 MANVYSRKKRIAHEIQKKINISLQHNIRDPRLRK-TTISWVSVSHDLGSATVFVIFNGIQ 59 Query: 59 --DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 ++ + +K IK LQ ASGFIR LLGK M LRIVP+LTF YD SL G+ + LV + Sbjct: 60 NDNQTSEEIKKRIKTLQAASGFIRYLLGKTMHLRIVPKLTFVYDQSLSHGIYIHELVNKI 119 Query: 117 VKHDEE 122 ++ D + Sbjct: 120 IREDHK 125 >UniRef50_C7RGP1 Ribosome-binding factor A n=2 Tax=Anaerococcus RepID=C7RGP1_ANAPD Length = 128 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 79/132 (59%), Gaps = 6/132 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM--MTTVSGVEMSRDLAYAKVYVTFLN 58 M K R +R++ E++KE++ IL+ ++ DPRL M T++ VE++ DL+YA YV+ L Sbjct: 1 MNK--RRTERISSEVKKELSKILRDDLNDPRLSTEAMVTITDVEVTNDLSYADCYVSVLG 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D + ++AL++A G+I+ L+G+ MRLR +PE F DNS+ G M L+ + Sbjct: 59 DATNK--EDVLEALEQAKGYIKILIGERMRLRSMPEFRFKIDNSIEHGAYMDKLIAETIA 116 Query: 119 HDEERRVNPDDS 130 D++ ++ Sbjct: 117 KDKKANEERENQ 128 >UniRef50_UPI0000E87C6E ribosome-binding factor A n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C6E Length = 111 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R R+ Q+++KE+A +LQ+E+KDP L +T + V++S L +AKV+ Sbjct: 1 MAKDYPRSDRIRQQIKKELANLLQKEVKDPSLNQIT-ILDVDVSPCLKHAKVFFV----S 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 E+A + +K L + F+RS L K M R +P+L F YD S+ E +++S L+ + Sbjct: 56 QEEASEEVMKGLARSMPFLRSQLAKRMTTRGIPKLHFVYDKSIDESIKISKLLDGI 111 >UniRef50_D1CFX0 Ribosome-binding factor A n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFX0_THET1 Length = 121 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 83/123 (67%), Gaps = 3/123 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R ++VAQE+++ I+ +L +E++DPR+G +T V+ VE+S DL +A ++V+ L ++++ Sbjct: 2 SRRTEQVAQEIKRHISELLVQEVRDPRIGFVT-VTAVEVSPDLEHATIHVSVLGSEEDE- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K +KAL+ ASGF+RS L K +RLR + EL F D S E +R+S L+ V+ D+ ++ Sbjct: 60 -KETMKALRRASGFLRSELAKRIRLRKMAELRFEPDRSAAEAIRISQLLNEVLPPDDRQK 118 Query: 125 VNP 127 + Sbjct: 119 ESE 121 >UniRef50_Q044B6 Ribosome-binding factor A n=58 Tax=Lactobacillales RepID=RBFA_LACGA Length = 123 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 2/119 (1%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV E+ +E+ IL+++I+DPRL +T ++ VE + DL+YA +Y + L +D Sbjct: 3 HRIGRVEGEILRELTKILRKDIRDPRLSDIT-ITAVECTNDLSYATIYYSLL-TEDPAKE 60 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K + L +A G +R LLG+ + + VPEL F D S+ G ++ NL+ V K D+ER Sbjct: 61 KEVAEGLDKAKGMMRHLLGQTLTVYKVPELIFKRDTSVAYGSKIDNLINQVKKQDQERE 119 >UniRef50_A1KUJ5 Ribosome-binding factor A n=28 Tax=Neisseriaceae RepID=RBFA_NEIMF Length = 123 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 4/118 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 + + R RV +++ +E+A +++ +KDPR G +T V+ VE++RD ++A V+ T LN + Sbjct: 6 RGYARQDRVKEQIMRELAELVRTGLKDPRAGFIT-VNEVEVTRDYSHATVFYTILN---Q 61 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DA + + L+ A G +RS L K ++L PEL F YD SL G+ +S L+ V Sbjct: 62 DAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESLERGLNLSALIDQVAAEK 119 >UniRef50_C7H128 MgpA protein n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H128_9FIRM Length = 458 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 4/119 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+ R R+A+E++K ++ +++DP L M ++ V++S D AKVY + Sbjct: 1 MARG-KRKDRLAEEIKKIVSNAFLLKVRDPILKMAINITAVDVSPDGRNAKVYYVVFSGS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D+D V A AL++ IR + + MR+R VP + F YD SL + +++ + Sbjct: 60 DKDEVAA---ALKKVEPLIRKEIAENMRVRYVPNICFAYDTSLEYSRHIESILHDIKDK 115 >UniRef50_A2CCY5 Ribosome-binding factor A n=23 Tax=cellular organisms RepID=RBFA_PROM3 Length = 142 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 70/128 (54%), Gaps = 3/128 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +RVA +++E + +L I+D R+ M +++ VE+S DL + K++V+ +E Sbjct: 5 RRVERVAALIRRETSELLIHGIRDERVHQGMVSITNVEVSGDLQHCKIFVSIYG--EEIQ 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 ++ L+ ASGF+R LG+ +++R PE+ F D + +G + NL+ + + E Sbjct: 63 RSEVLEGLEAASGFLRGELGRRLQMRRAPEVHFHLDRGIEKGTSVLNLLEQLEQQRETLG 122 Query: 125 VNPDDSKE 132 +S + Sbjct: 123 EVQSESDQ 130 >UniRef50_B1IA81 Ribosome-binding factor A n=30 Tax=Streptococcus RepID=RBFA_STRPI Length = 116 Score = 131 bits (330), Expect = 8e-30, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 76/119 (63%), Gaps = 3/119 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA F R RV E+++E+ ILQ++++DPR+ +T ++ V+M DL+ AKVY T L++ Sbjct: 1 MANHF-RTDRVGMEIKREVNEILQKKVRDPRVQGVT-ITDVQMLGDLSVAKVYYTILSNL 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D K I L++A+G I+ LG+ ++L +P+LTF D S+ G ++ ++ ++ K+ Sbjct: 59 ASDNQKVQI-GLEKATGTIKRELGRNLKLYKIPDLTFVKDESIEYGNKIDEMLRNLDKN 116 >UniRef50_C8NBH2 Ribosome-binding factor A n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBH2_9GAMM Length = 128 Score = 130 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K R +R+ ++M++++A+ + + + P ++ +++ V ++RDL++AKVYVT + + Sbjct: 1 MPKGQDRTRRIGEQMRRDLAVAVPQILDHPHASLL-SITAVRVTRDLSFAKVYVTHVIN- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D D + ++AL +G +R L + + +R +PEL F YD+S+ G RM +L+ +VK Sbjct: 59 DADERQTLLRALNAHAGQLRHALAQKLSIRKMPELHFVYDDSVEYGARMDHLLHDLVKD 117 >UniRef50_C1A8N9 Ribosome-binding factor A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RBFA_GEMAT Length = 146 Score = 130 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E RP RVA+ +++E+A L KDPR+ TV+ VE++RDL +A V+V+ + D + Sbjct: 3 EVRRPDRVAEAIREEVATFLSEGAKDPRIRAFVTVTAVEVTRDLRHATVFVSLMGDDADK 62 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 K+ L + +RS LGK++RLR PE+ F D S+ R+ +L+ + E + Sbjct: 63 --KSTTAGLASVASHLRSQLGKSLRLRSAPEIHFRTDESVARASRIEHLLAKIRDEREAQ 120 Query: 124 RVNPDDSKE 132 D +++ Sbjct: 121 EPAQDPAQD 129 >UniRef50_A3D7K5 Ribosome-binding factor A n=20 Tax=Gammaproteobacteria RepID=RBFA_SHEB5 Length = 152 Score = 130 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 69/136 (50%), Positives = 103/136 (75%), Gaps = 5/136 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKEF R +R+AQ++Q+E+A +LQR++KDPR+G +T V+ V++SRDL+YAKV+VTF ++ Sbjct: 1 MAKEFSRTRRIAQQLQQELAQVLQRDMKDPRIGFVT-VNDVDVSRDLSYAKVFVTFF-EE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D+ V+ + AL A+ +IR+L+ M+LR++PEL F YD+SLVEGMRMSNLV+ V+ D Sbjct: 59 DKAVVQEKLNALISAAPYIRTLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVSQVINQD 118 Query: 121 EERRVN---PDDSKED 133 + ++ D S ED Sbjct: 119 KAKQQQFGSEDASVED 134 >UniRef50_Q8DVP8 Ribosome-binding factor A n=5 Tax=Lactobacillales RepID=RBFA_STRMU Length = 116 Score = 130 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 2/117 (1%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R +RV E+++E+ ILQ++++DPR+ +T ++ V+MS DL+ AKVY T ++D D Sbjct: 2 SNHRIERVGMEIKREVNEILQKKVRDPRVQGVT-ITDVQMSGDLSLAKVYYTIMSDLASD 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K I L++A G I+ LGK + + +P+LTF D S+ G ++ ++ + K + Sbjct: 61 NQKVQI-GLEKAKGTIKRELGKNLTMYKIPDLTFIKDESIEYGNKIDQMLRDLEKRN 116 >UniRef50_Q3AB99 Ribosome-binding factor A n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RBFA_CARHZ Length = 125 Score = 130 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + +R AQ +++ +A I+ RE+KDPRLG + +V+ V+++RDL+ AK+Y++ E+ Sbjct: 6 SHKHERTAQAIKEAVAAIISREVKDPRLGFV-SVTKVDLARDLSQAKIYISVYGS--EED 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K AL A GFI+ L +RLRI+PEL F D S+ G R+ ++ + K E Sbjct: 63 KKNSFIALNSAKGFIKGELASRVRLRIMPELYFVEDPSIEYGARIMEILEGLKKEAGENE 122 Query: 125 VN 126 Sbjct: 123 SE 124 >UniRef50_C9RKT5 Ribosome-binding factor A n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKT5_FIBSS Length = 117 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 70/117 (59%), Gaps = 2/117 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R R+ ++ ++EI+ ++Q+ +KDPR+ + +++ V+++ DL+YAK V+ + E Sbjct: 2 TRRTDRLGEQFREEISKLIQKGLKDPRVSTLASITRVDITEDLSYAKALVSVMGSDKEK- 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + + L ++GFIR +LGKA+++ VPEL F D +L M + ++ + + E Sbjct: 61 -RDTLVGLNNSAGFIRGVLGKALKIFKVPELKFVLDENLEHAMHIEEILAELKQKGE 116 >UniRef50_B9E1K3 Ribosome-binding factor A n=35 Tax=Clostridium RepID=RBFA_CLOK1 Length = 121 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 72/115 (62%), Gaps = 2/115 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ +EM++EI+ I++ ++KDPRL M +V+ V++++D YAKV+V+ ++ + Sbjct: 5 RSGRINEEMKREISNIIRNDMKDPRLSAMVSVTKVDVTKDQKYAKVFVSIYG--EDKSKD 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + L+ + FIR +G ++LR PE+ DN++ GM ++ L+ + ++++ Sbjct: 63 DTFQVLKSSESFIRREVGHRVKLRNTPEIIIEMDNTIEYGMHINELLHKIKENEK 117 >UniRef50_A3MJW5 Ribosome-binding factor A n=41 Tax=Burkholderiales RepID=RBFA_BURM7 Length = 122 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 8/121 (6%) Query: 1 MAKEFGRPQR---VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL 57 M+K+ P R +A ++Q++++ ++ RE+KDPR+G + T+ VE++ D A+AKVY T L Sbjct: 1 MSKKRSSPNRNVQIADQIQRDLSELIMREVKDPRIG-IVTIQSVELTPDYAHAKVYFTAL 59 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 D +AL A+G + +LL K + + VP L F YD ++ + + MS L+ Sbjct: 60 TGTPAD----TQEALNHAAGHLHNLLFKRLHIHTVPTLHFHYDQTIEKAVAMSRLIDEAN 115 Query: 118 K 118 Sbjct: 116 A 116 >UniRef50_Q609C1 Ribosome-binding factor A n=1 Tax=Methylococcus capsulatus RepID=RBFA_METCA Length = 119 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 3/119 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R RV+ +MQ+EIA L+ I P LG M TVS V++SRDLA AKV+VTFL + Sbjct: 1 MPREFSRSDRVSAQMQREIAEFLRTGIDAPELG-MVTVSDVDVSRDLAVAKVFVTFLGAR 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 E +A +K L E + +R +LG+ MR+RI+PE+ F YD+SL G+ M ++ S+ K Sbjct: 60 LE--TRAAVKRLGEFAPQLRQVLGRRMRMRIIPEIRFAYDDSLERGLHMDEVLRSLNKD 116 >UniRef50_B5YHT9 Ribosome-binding factor A n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RBFA_THEYD Length = 118 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 4/118 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + R QR+ +++E+A I+ +IKDPRLG +T V+ VE+S DL AKV+++ L +D Sbjct: 4 YKRAQRLKVLLKEEVAEIILHKIKDPRLGFIT-VTDVELSDDLRIAKVFISVLKTED--- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + ++ L +A GF+RS + K +R++I+P F +D S+ G R+ L+ + K EE Sbjct: 60 RQLTLQILNDAKGFVRSEIAKRLRIKIIPTFEFLFDESIDRGFRIDQLLKEIKKTSEE 117 >UniRef50_Q6MD65 Ribosome-binding factor A n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RBFA_PARUW Length = 131 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ +++ I+ +++R++++P + + TV+ V++SRDL YAKV+++ + E A Sbjct: 5 RTDRLNSLLKEVISEVIRRDVRNPYVTELVTVTRVQISRDLRYAKVFISIIGS--EQAKV 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 I+AL A+GFI + + +R PEL F D+S+ + MR+ L+ + K E R+ + Sbjct: 63 ETIEALNSAAGFIAVNASQKVVMRYFPELNFKLDDSVDKHMRIEELLGKITKERESRQGD 122 Query: 127 PDDSKE 132 D E Sbjct: 123 NSDQLE 128 >UniRef50_Q8D2X7 Ribosome-binding factor A n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=RBFA_WIGBR Length = 125 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 54/114 (47%), Positives = 87/114 (76%), Gaps = 1/114 (0%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 ++E R ++++E+Q++IALILQ++I DPR+G ++TVSGV++S D ++AK++VTFLN Sbjct: 3 SRENNRKFKISKEIQRKIALILQQKINDPRIG-ISTVSGVDLSSDFSHAKIFVTFLNKNT 61 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + +K+G+ L +AS FIR +L K MRLRI+P+LTF YD SL++G + +L + Sbjct: 62 KQQIKSGLFILNKASFFIRKILNKTMRLRIIPKLTFIYDYSLIKGRNIDDLFNN 115 >UniRef50_A6NTY2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTY2_9BACE Length = 129 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 72/115 (62%), Gaps = 6/115 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R R+ +E+Q+E++ ++ R +KDPR+ + +++ V+ + DL YAK++V+ L+ Sbjct: 1 MA--SNRIGRINEEIQRELSGLI-RTVKDPRVHGLVSITAVDTTTDLRYAKIHVSVLDKS 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 D V +K L+ A+G++R LG A+ LR PEL F D+S+ +G + +++ Sbjct: 58 D---VNEVVKGLKSAAGYLRRELGAALSLRYTPELIFEKDDSMAQGAHILSMLRD 109 >UniRef50_C5S648 Ribosome-binding factor A n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S648_CHRVI Length = 127 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 75/120 (62%), Gaps = 4/120 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +EF R +R+ EM++ +A++++ ++KDPRL +T V V ++RDLA+AKVY T ++ Sbjct: 4 REFDRTERIGAEMKRALAVLVRDQVKDPRLANIT-VHEVRVTRDLAHAKVYFTCFPSDED 62 Query: 63 DAVKAGIKALQE-ASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + + L + +GF+R L + +RLR +P+L F YD S+ +G +S+L+ V D Sbjct: 63 TPAQERL--LNKQLAGFLRHALAQEVRLRAMPQLHFVYDESIAQGQHLSDLIEQAVAKDR 120 >UniRef50_UPI000196CD5A hypothetical protein CATMIT_02506 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CD5A Length = 109 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 6/111 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + ++ + KE++LIL+ E+KDP L M TV+ V S D++ AKVYVTF+ ++ + Sbjct: 5 KIDKMNHYIMKELSLILRDEVKDPALR-MCTVTSVSCSNDMSVAKVYVTFMKNQGK---- 59 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 G++AL GFIRS L + +++R PEL F D SL G R+ L+ ++ Sbjct: 60 -GLQALDRCKGFIRSQLARRLKIRKCPELIFKVDESLEYGNRIEELIKNLH 109 >UniRef50_B0S1E4 Ribosome-binding factor A n=2 Tax=Finegoldia magna RepID=RBFA_FINM2 Length = 121 Score = 128 bits (322), Expect = 7e-29, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 71/122 (58%), Gaps = 3/122 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R +R++ E++K I+ + +KDPR+ + +V+ V+++ DL++A VY+ + D ++ Sbjct: 2 NIKRVRRISSEIKKVISSSIINSLKDPRIDKLNVSVTEVKVTNDLSFATVYIAVIGDDEK 61 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 K ++ L +A GF++ +G+ + LR VP+L F D + + M + NL+ S+ + + Sbjct: 62 K--KQTLEGLNKAKGFLKKQIGENVDLRHVPQLIFKIDETSEQSMHIENLIKSIHEENHN 119 Query: 123 RR 124 Sbjct: 120 EN 121 >UniRef50_D1R4P7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4P7_9CHLA Length = 132 Score = 127 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ +++ I ++++++++P + MTTV+ V++++DL +AKVYV+ + E + Sbjct: 5 RTDRLNSLLREVITEVIKKDVRNPYVSEMTTVTRVDITKDLRHAKVYVSIMGTGAEK--E 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 ++AL+ A+GFI + + +R PELTF D+S+ MR+ +L+ + R Sbjct: 63 DTLQALRSAAGFIAVNSSQKVVMRFFPELTFVLDDSVDRQMRIESLLREIEDEKSTRSEE 122 Query: 127 PDDSKE 132 DD+ E Sbjct: 123 SDDNDE 128 >UniRef50_B4E7L2 Ribosome-binding factor A n=21 Tax=Burkholderiales RepID=RBFA_BURCJ Length = 132 Score = 127 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 8/129 (6%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R ++A ++Q++++ ++ RE+KDPR+G + T+ VE++ D A+AKVY T L Sbjct: 9 NRNVQIADQIQRDLSELIMREVKDPRIG-IVTIQSVELTPDYAHAKVYFTALTGDP---- 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV---VKHDEE 122 +AL ASG + +LL K + + VP L F YD ++ + + MS L+ D++ Sbjct: 64 DKTQEALNHASGHLHNLLFKRLHIHTVPTLHFHYDQTIEKAVEMSRLIKEANSTRAKDDD 123 Query: 123 RRVNPDDSK 131 P Sbjct: 124 EAGAPAKDD 132 >UniRef50_B7GNA2 Ribosome-binding factor A n=10 Tax=Bifidobacteriaceae RepID=RBFA_BIFLI Length = 158 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R R+A +Q+ +A ++RE+ D RL +T V+ V ++ DL AKVY T L + Sbjct: 1 MAGTNPRAARIAALIQRVVASSIERELHDKRLASIT-VTEVRVTNDLQIAKVYWTQLGHE 59 Query: 61 --DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +E K +AL +A G +RSL+G LR+ P+L F +D E + +++ K Sbjct: 60 GHEEGERKRAQQALDQAKGHLRSLVGHKAGLRLTPQLQFVFDEVPGEAHEIEDILAVAKK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_A5UZQ3 Ribosome-binding factor A n=5 Tax=Chloroflexaceae RepID=RBFA_ROSS1 Length = 130 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 7/130 (5%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +++ E+Q+ + ++Q E+KDPR+G TV GVE++ DL A+V ++ + DE Sbjct: 2 SKRTEQLGHEIQRILGEVIQYELKDPRVG-FATVVGVEVTADLQIARVRISVMGTPDER- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 + + AL+ A GF+R L + + LR VPEL D S+ + + L+ EER Sbjct: 60 -RETMAALERARGFLRRRLAEELNYLRFVPELRLILDTSVDYSLHIDELLRRAA---EER 115 Query: 124 RVNPDDSKED 133 +P ED Sbjct: 116 ADSPPQQPED 125 >UniRef50_O65693 Probable ribosome-binding factor A, chloroplastic n=10 Tax=Embryophyta RepID=RBFA_ARATH Length = 215 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREI-------------KDPRLGMMTTVSGVEMSRDL 47 MA R + VA+++ +E++ +L + D L +TT+S VE+S DL Sbjct: 54 MANP-RRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDL 112 Query: 48 AYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGM 107 KVYV+ D I L+ + ++RS LGK M+LR+ PE+ F D ++ G Sbjct: 113 QVVKVYVSVFGDD--RGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAMERGS 170 Query: 108 RMSNLVTSVVKHD--EERRVNPDDSKED 133 R+ ++ + E + P DS ED Sbjct: 171 RVIAILDKIKAEKGSGEGKTEPSDSTED 198 >UniRef50_A5EWY8 Ribosome-binding factor A n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RBFA_DICNV Length = 122 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R +R+ ++M++++A L + P ++ + + V ++RDL++AKVYVT + D Sbjct: 1 MAHGVDRTRRIGEQMRRDLAQALVDIVHHPHASLL-SFTAVHLTRDLSFAKVYVTHVLDN 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E+ + + L +G R L K + +R VPEL F+YD S+ G RM L+T +VK Sbjct: 60 EEERSE-LVAELNAKAGQFRHYLAKNLSIRKVPELQFYYDQSVEYGARMEQLLTHLVKDS 118 Query: 121 EERR 124 E + Sbjct: 119 EHKD 122 >UniRef50_Q04GM9 Ribosome-binding factor A n=2 Tax=Oenococcus oeni RepID=RBFA_OENOB Length = 121 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 4/123 (3%) Query: 1 MAK--EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 M K + R RV +Q+EI+ IL +E+ DPRL +T ++G++M+ D + A VY T + Sbjct: 1 MPKHAKSARLLRVEGTIQREISEILVKEVSDPRLKDVT-ITGIDMTPDFSIAYVYWTIYS 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D KA LQ A G I+ L + M +P+L F D ++ G + L+ + Sbjct: 60 DLASSGEKAD-AGLQAAKGLIKRQLARKMTTFKIPDLIFKRDTAIEYGDHIEQLIAKLNH 118 Query: 119 HDE 121 + Sbjct: 119 ESK 121 >UniRef50_B6J6B2 Ribosome-binding factor A n=6 Tax=Coxiella burnetii RepID=RBFA_COXB1 Length = 119 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 76/122 (62%), Gaps = 4/122 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R QRVA + +++A +L++E++D RL + +++ V +S DL AKV+ + L +++E Sbjct: 2 SQRQQRVADLIHQQLAELLKKEVRDSRLSKI-SLTAVSISPDLKQAKVFYSLLENQNEKE 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 V+ KAL +A+G++R LL +A LR VP+L F YD S+ R+S L+ +K D+ Sbjct: 61 VQ---KALNKATGYLRHLLAQATVLRYVPKLEFVYDESIERAHRISLLIERALKKDDSDE 117 Query: 125 VN 126 + Sbjct: 118 SS 119 >UniRef50_A1A0A3 Ribosome-binding factor A n=6 Tax=Bifidobacterium RepID=RBFA_BIFAA Length = 167 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R R+A +Q+ IA ++ ++ D RL +T ++ V ++ DL AKVY T L + Sbjct: 1 MAGTNPRAARIAALIQRVIASSMEAQLHDKRLANVT-ITEVRVTNDLQIAKVYWTQLGHE 59 Query: 61 --DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 ++ + +AL +A G +RSL+G LR+ P+L F +D E + +++ K Sbjct: 60 GHEQGERRRAQQALNQAKGRLRSLVGTKAGLRLTPQLEFIFDEVPGEAHEIEDILALAHK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_C4FWY3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWY3_9FIRM Length = 119 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 2/117 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV QE+ +E+ IL RE KDPR+ +T ++ V+++ DL A ++ + L+DK K Sbjct: 5 RVGRVRQEIMREVNRILLREAKDPRIEGVT-ITDVDLTGDLQQATIFYSTLSDKAGQRQK 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 L+ +G +RS LGK ++L PE+ F D S+ G R+ L+ + + D+ Sbjct: 64 -TEAGLKAVTGLVRSELGKVLKLYKTPEIRFERDRSVDYGNRIDQLLNQIHQKDQAE 119 >UniRef50_Q3BRP6 Ribosome-binding factor A n=19 Tax=Xanthomonadaceae RepID=RBFA_XANC5 Length = 130 Score = 125 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 82/133 (61%), Gaps = 5/133 (3%) Query: 1 MA-KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K F R RV+ ++++++ I+ ++D L + +VS VE+SRDLA+AKV+VT L Sbjct: 1 MPTKSFHRTDRVSAQVRRDLGTIVHAAVRDHGLPSV-SVSDVEISRDLAHAKVFVTAL-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 ++ +K L+E +G +R+ L +AM+LR VPEL F YD+S+ G R+ NL+ + Sbjct: 58 -QQERSAEAVKGLKEIAGQLRTQLARAMKLRHVPELHFHYDDSVDRGERIDNLLRDLDDV 116 Query: 120 DEERRVNPDDSKE 132 E + +D+++ Sbjct: 117 GPEATSSDEDAEQ 129 >UniRef50_Q1DAM4 Ribosome-binding factor A n=3 Tax=Cystobacterineae RepID=RBFA_MYXXD Length = 119 Score = 125 bits (316), Expect = 4e-28, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 4/116 (3%) Query: 6 GRPQRVAQEMQKEIALILQRE-IKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 RP+RV QE+Q I +L R ++DPR+G +T ++GV++S DL A+V+ + + ++ E A Sbjct: 5 SRPERVGQEIQAAIGDLLTRGMLRDPRIGYIT-ITGVKVSPDLRVARVFYSMMGNEQERA 63 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K L+ A GF+R + A+ LR+ PE+ F +D S+ EG ++ L+ V + Sbjct: 64 --DTQKGLEAAKGFVRREVTSAVNLRVSPEIFFSFDESVGEGDKIDRLLREVRNKE 117 >UniRef50_A0Q8F2 Ribosome-binding factor A n=18 Tax=Francisella RepID=RBFA_FRATN Length = 143 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%), Gaps = 5/133 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA E GR QRVA E+QK I+L+L+ IKD +L T++ V++S+DL+YAK+Y T L + Sbjct: 1 MAAE-GRVQRVASELQKVISLLLRTRIKDAKLAS-ATITEVDLSKDLSYAKIYYTCLAIE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D + + KA +++ GF RS + K++ LRIVP L F YD SL GM+M + ++ D Sbjct: 59 DAEYID---KAFEKSKGFFRSSIAKSLSLRIVPNLKFIYDTSLDYGMQMEEKIQQALEAD 115 Query: 121 EERRVNPDDSKED 133 + D S ++ Sbjct: 116 SKIIKQDDKSLQE 128 >UniRef50_Q1Q1G7 Similar to ribosome-binding factor A n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1G7_9BACT Length = 125 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 5/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K R +R+++ +++E++ I+ ++KDPRL +T V+ V++S DL KVYV+ L ++ Sbjct: 1 MSK--RRAERLSEFIKQEVSKIILYKVKDPRLSFIT-VTEVDISADLKNVKVYVSVLGNE 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E K + L A GFI++ LG +R++ P L F D + R+ ++ V+ Sbjct: 58 LER--KNTMCGLDHAKGFIQTELGSCLRIKYTPHLKFCLDELTEKRNRILKIIDEAVRGS 115 Query: 121 EERRVNPDDS 130 N + Sbjct: 116 SVIEKNGSEE 125 >UniRef50_A5FQR5 Ribosome-binding factor A n=5 Tax=Dehalococcoides RepID=RBFA_DEHSB Length = 118 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 2/118 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +++ Q + +I+ +LQ+EI+DPRL + +V+ V++S D+ +A VYV+ L + Sbjct: 2 SRRIKKLNQLFRADISALLQKEIRDPRLDTLLSVNEVDISEDMRHANVYVSHLAGDEHK- 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + AL A+GF R+ + K +R +P F +D ++ G+R++ L+ V+ H E Sbjct: 61 -DEILAALNAAAGFFRTEIAKKTDIRYMPVFHFVWDITIERGVRLNTLIDQVIHHQPE 117 >UniRef50_C1EAK4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EAK4_9CHLO Length = 252 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 16/138 (11%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIK-------------DPRLGMMTTVSGVEMSRDL 47 MA + R +V Q+M++EI+ ++Q + K D + M TV+ VE+S DL Sbjct: 50 MANQ-RRVAKVQQQMRREISNMMQTDKKLRDMVYPEERMGVDNVMSCMVTVADVEVSGDL 108 Query: 48 AYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGM 107 KV+V+ L D E K I L++ G++R +GK + LR+ P++ F YD+S G Sbjct: 109 QVVKVFVSILGD--ERGKKNAINGLKKMEGYVRRNIGKRVSLRLTPDIRFVYDDSFERGQ 166 Query: 108 RMSNLVTSVVKHDEERRV 125 R+S+L+ + E R Sbjct: 167 RVSSLLDELRVEREVREA 184 >UniRef50_A8ZZ63 Ribosome-binding factor A n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RBFA_DESOH Length = 129 Score = 125 bits (314), Expect = 6e-28, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 5/131 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K F R R+ +Q+ ++ IL++ + DPRL M T++GV++SRDL A VY D Sbjct: 2 KSFPRADRIGSSIQRGVSEILRKGLGDPRLD-MATITGVKVSRDLGVAYVYYVIPGDTAG 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV--VKHD 120 A A + A GFI+ L ++++ +P++ F YD S G + ++ + K D Sbjct: 61 RAAAAA--GFKSAEGFIKRSLAGMLKMKYMPDIRFRYDESFAYGQSIDTVLRELQTEKDD 118 Query: 121 EERRVNPDDSK 131 P + Sbjct: 119 VPDSGRPPEDD 129 >UniRef50_D2MPT2 Ribosome-binding factor A n=7 Tax=Bacteria RepID=D2MPT2_9FIRM Length = 117 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 4/121 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA +R+ ++K I+ I+Q +KDP +G +T ++ V +S D +YA VYV FL K Sbjct: 1 MANTIK-QKRLEGIIRKNISDIIQFNLKDPDVGFVT-ITDVAVSNDHSYAHVYVVFLGKK 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + +AG+KAL A GFIR L + + +R PEL F D + G + +++ + + + Sbjct: 59 ERA--QAGLKALNRAKGFIRRELSQRLDIRRTPELIFQMDQAEERGRHIDDIIRKIHEGE 116 Query: 121 E 121 + Sbjct: 117 Q 117 >UniRef50_UPI0001C31DB9 ribosome-binding factor A n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31DB9 Length = 121 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 72/123 (58%), Gaps = 3/123 (2%) Query: 8 PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 +RV + ++ ++ + +++KDPR+G +T V+ V S DL +A+VYV+ L D E+ Sbjct: 1 MRRVDEAVRAVLSDAITQDLKDPRVGFVT-VTAVRTSSDLRHARVYVSVLGD--EETRAE 57 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNP 127 + L+ A+G+++ L+ + +R++ PE+ F YD+S+ GMR++ ++ E + Sbjct: 58 CLAGLRSATGYLQRLVAREVRMKYTPEIVFAYDDSIDRGMRITEILRDAPAPAREDGGDR 117 Query: 128 DDS 130 + Sbjct: 118 EAD 120 >UniRef50_D2UCR3 Probable ribosome-binding factor a protein n=1 Tax=Xanthomonas albilineans RepID=D2UCR3_XANAL Length = 136 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%) Query: 1 MA-KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K F R RVA ++++++ I+ ++D L + +VS VE++RD+A+AKV+VT L Sbjct: 1 MPTKSFRRTDRVAAQIRRDLGTIVHAAVRDHGLPSV-SVSDVEVTRDMAHAKVFVTALM- 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + +K L+E + +R+ L +AM+LR VPEL F YD+S+ G R+ L+ + + Sbjct: 59 --PERSSEAVKGLKELAPQLRTELARAMKLRHVPELHFHYDDSVDRGERIDTLLRDMPEL 116 Query: 120 DEERRVNPDDSKE 132 D+ + Sbjct: 117 QSGVEAEGSDATD 129 >UniRef50_A5ZAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAJ4_9FIRM Length = 92 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 2/94 (2%) Query: 35 MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPE 94 MT+V+GVE++ DL + KVY++ L D E+A + L+ A+GFIR L + + LR PE Sbjct: 1 MTSVTGVEVTPDLKFCKVYISVLGD--EEAKADTMAGLKSAAGFIRRELARTVNLRNTPE 58 Query: 95 LTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPD 128 L F D S+ GM+MS L+ V +++E + + Sbjct: 59 LKFVMDQSIEYGMKMSKLIDEVNGNNKEESEDNE 92 >UniRef50_Q0AYI7 Ribosome-binding factor A n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RBFA_SYNWW Length = 122 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 78/122 (63%), Gaps = 5/122 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLND 59 M+K R +R++ E+ + ++ I+Q EIKDPR+ +++ +++S D ++A+V ++ L D Sbjct: 1 MSK--RRQERMSVEIMRVLSQIIQEEIKDPRIEFKNLSITRIDLSNDYSHARVNISILGD 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 E + +KALQ+A G+IRS L + +++R PEL F D S+ G+R+S+L+ + + Sbjct: 59 --EIQREEAMKALQKAKGYIRSALAQQLKVRHAPELEFRLDRSIEHGIRISSLLEEIKEE 116 Query: 120 DE 121 + Sbjct: 117 AK 118 >UniRef50_D1C376 Ribosome-binding factor A n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C376_SPHTD Length = 135 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 3/113 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R ++A ++ EI+ ILQRE+KDPRLG + +++ VE+S DL YAKVYV+ L E+ Sbjct: 3 SRRQVQLADFLRDEISEILQREMKDPRLG-LASITRVELSPDLRYAKVYVSVLGS--EED 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 +A + AL A+GF+R LL MR+R VPE+ F D S+ + + + Sbjct: 60 REATMAALTGAAGFVRHLLKPRMRVRHVPEIRFRLDRSMEHAEVIQRTLRELN 112 >UniRef50_C7H6A6 Ribosome-binding factor A n=3 Tax=Ruminococcaceae RepID=C7H6A6_9FIRM Length = 136 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 74/125 (59%), Gaps = 5/125 (4%) Query: 10 RVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 R+AQ+M++E+ I+ R +KDPRL G + TV+ ++++ DL AKVYV+ + ED K Sbjct: 15 RLAQDMKREVIAIIGR-LKDPRLEGGLLTVTRLDVTPDLDVAKVYVSVMG--REDGPKPA 71 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VKHDEERRVNP 127 I+AL A+G +R+ + K M +R P F D+ ++ L+ ++ V D E P Sbjct: 72 IEALNRAAGHVRTEVSKKMHIRKAPRFIFVEDDGAAYAAHINELLRTLNVNGDAEETSQP 131 Query: 128 DDSKE 132 ++++E Sbjct: 132 EETEE 136 >UniRef50_C5NYH6 Ribosome-binding factor A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYH6_9BACL Length = 119 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 68/118 (57%), Gaps = 3/118 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+A++++KEI +L ++K+ LG +T V+ V ++ D + AKV+ T L + E + Sbjct: 5 RVNRLAEQIKKEITYVLATKVKNHDLGFVT-VTEVALTGDYSQAKVFYTVLGGEREK--E 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 +A ++ GF++S + K +++R PEL F YD + + + +L+ SV K + Sbjct: 62 KTKEAFKKIKGFVKSEVAKKIKIRKFPELIFQYDTTAEYALHIESLIASVSKKENNEE 119 >UniRef50_P59411 Ribosome-binding factor A n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RBFA_BUCBP Length = 119 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 47/118 (39%), Positives = 79/118 (66%), Gaps = 3/118 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K R +++ E++K+I+ I+ ++ DPRL ++ +VS V +SRD +YAK+YV+ LN+ Sbjct: 1 MQK-LNRSFKISNEIKKKISWIICYQLCDPRLFNILISVSSVNLSRDFSYAKIYVSILNN 59 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 K+ + K + LQ +S IR LL K + LRI+P L F +D+S V G +++NL+ +V+ Sbjct: 60 KN-ISFKEILTILQNSSKHIRYLLAKGIFLRIIPTLHFCHDSSYVNGTKITNLINNVL 116 >UniRef50_C8NZL4 Ribosome-binding factor A n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZL4_ERYRH Length = 111 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 68/112 (60%), Gaps = 4/112 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + +R+ +++E+A ++Q + DP L + +++ V+++ D ++A +YV+FL D + + Sbjct: 4 KKERIESIIKRELAPVIQNRLNDPSLKFV-SITEVDVTNDFSFATIYVSFLEDSKK---Q 59 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 G+ AL +A G +RS + KA+ +R PEL F D S G ++ ++ S+ K Sbjct: 60 PGMDALNKAKGMLRSEVSKALSIRRTPELIFKLDESSEYGAKIDGILESLKK 111 >UniRef50_A6W7Z4 Ribosome-binding factor A n=14 Tax=Actinobacteria (class) RepID=RBFA_KINRD Length = 171 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++A ++ +A L++ +KDPRLG +T ++ ++ DL +A ++ T +E Sbjct: 5 TRARKLADRIKVIVADALEKRVKDPRLGFVT-ITDARVTNDLQHATLFYTVFGSDEEKQG 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 A AL+ A G +RS +GK +R+ P LTF D ++ +L+ + D Sbjct: 64 TAL--ALESAKGVLRSEVGKRTGIRLTPTLTFTLDEVPETATQIQDLLKQAAEQD 116 >UniRef50_Q0RDS6 Ribosome-binding factor A n=44 Tax=Actinomycetales RepID=RBFA_FRAAA Length = 203 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 7/132 (5%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++A +++ +A L+R +KDPRLG M TV+ V ++ DL A V+ T D EDA Sbjct: 5 ARARKLAVRIREVVASALERGVKDPRLG-MVTVTEVRVTPDLVDATVFYTVYGD--EDAR 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD----E 121 +A +AL+ A G +RS +G+A +++ P LTF +D + + +L++ + D E Sbjct: 62 RASAEALESARGLLRSQVGRATGVKVTPTLTFVHDRLPDDAKHLEDLISVARERDARLAE 121 Query: 122 ERRVNPDDSKED 133 RR ED Sbjct: 122 VRRDARPAGDED 133 >UniRef50_B6BVJ9 Ribosome-binding factor A n=1 Tax=beta proteobacterium KB13 RepID=B6BVJ9_9PROT Length = 113 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 77/119 (64%), Gaps = 6/119 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R ++ Q+++KEIA ILQ EI+ P L + T++ +E+S+DL +AK+Y F++ + Sbjct: 1 MAKDYPRSNQIGQQIKKEIAEILQYEIQHPTL-VNVTITDLELSKDLRHAKIY--FISKQ 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D+ ++ KAL+ + FIR L K M R +P L F YD+S+ R++ L++S K Sbjct: 58 DQIELE---KALKRSMSFIRQSLSKRMTTRGIPNLEFIYDHSIDHNDRITELLSSAFKK 113 >UniRef50_A1TSK2 Ribosome-binding factor A n=15 Tax=Burkholderiales RepID=RBFA_ACIAC Length = 125 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 9/124 (7%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +VA ++Q+++ ++ RE+KDPR+G M T+ VE++ D A+AKV+ + L Sbjct: 10 NRGFKVADQIQRDLTELI-RELKDPRIG-MVTLQAVEVTPDYAHAKVFFSVLVGD----A 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 A AL +A+GF+R+ L K + + VP L F +D + M+ L+ V R Sbjct: 64 DATQDALNQAAGFLRNGLFKRLHIHTVPTLHFMFDRTTERASDMNALIARAVA---SRSK 120 Query: 126 NPDD 129 + D+ Sbjct: 121 DDDE 124 >UniRef50_Q493T6 Ribosome-binding factor A n=2 Tax=Candidatus Blochmannia RepID=RBFA_BLOPB Length = 119 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 78/116 (67%), Gaps = 1/116 (0%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 + R QR+A E+ K++++ILQ +I D R+G + T+SGV++S+DL A ++VTF+N + Sbjct: 4 QHSYRTQRIANEIHKKVSIILQHKIDDIRIG-IPTISGVQVSKDLKNANIFVTFINKEGP 62 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + + + LQ AS FIR LL M +R+ P L F YD+SL+EG ++ +L+++ K Sbjct: 63 EEIDTAVMILQRASRFIRFLLANTMCIRVAPILFFKYDSSLIEGAKVCSLISTTEK 118 >UniRef50_Q6AJY5 Ribosome-binding factor A n=1 Tax=Desulfotalea psychrophila RepID=RBFA_DESPS Length = 140 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 6/127 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R RVA ++KE+A++L +I+DP+L + +S V + DL K+Y T Sbjct: 20 EVKRSTRVADAIRKELAVLLLEKIRDPKLQDV-GISRVTATDDLTIVKIYYTIYGPHKH- 77 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 VKA KA A+GFIRS L + + +R P L F YD + + + N+ + K ER Sbjct: 78 -VKAVDKAFLAATGFIRSHLARTLNMRYTPNLQFCYDKTAEKVAEIENIFQEIAK---ER 133 Query: 124 RVNPDDS 130 + N ++S Sbjct: 134 QDNGENS 140 >UniRef50_B5Y926 Ribosome-binding factor A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=RBFA_COPPD Length = 137 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 75/127 (59%), Gaps = 7/127 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ Q +++E++ IL ++ D RL +T ++ VE+S D Y KVY + + K+ + + Sbjct: 5 RKERLQQAIKQELSKILLEDMNDERLKFVT-ITDVELSDDQKYLKVYFSTMPGKNSEQI- 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 +++L+ G++ + + +RLR PE+ F DNS+ G+RM L+ + K DE V Sbjct: 63 --LQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDE---VK 117 Query: 127 PDDSKED 133 D+S ED Sbjct: 118 EDESHED 124 >UniRef50_B4RC51 Ribosome-binding factor A n=2 Tax=Alphaproteobacteria RepID=RBFA_PHEZH Length = 145 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 5/131 (3%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + ++ + I + E I DP L + TV+ V +S DL +A V+V L + Sbjct: 16 SQRQLRAGELVRHALVEIFREEEINDPVLAGVSVTVTEVRVSPDLRHATVFVEPLGGEHA 75 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 D V ++AL + F+R LG+A+ LR PEL F +D S E RM+ L + Sbjct: 76 DEV---VQALNRHARFLRGHLGRAIELRFTPELKFLHDESFNEAARMAKLFDDPKVRQDL 132 Query: 123 RRVNPDDSKED 133 P DS +D Sbjct: 133 TPQPPSDSWKD 143 >UniRef50_Q2J730 Ribosome-binding factor A n=14 Tax=Actinomycetales RepID=RBFA_FRASC Length = 168 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 7/132 (5%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +R+A +++ +A L+R +KDPRLG M TV+ V ++ DL A V+ T D E A Sbjct: 5 ARARRLAVRIREVVASTLERGVKDPRLG-MVTVTDVRLTPDLVDATVFYTVYGD--ETAR 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD----E 121 +A +AL+ A G +RS +G+A +++ P LTF +D + + L++ + D E Sbjct: 62 QASAQALESARGLLRSQVGRATGVKVTPTLTFVHDRLPDDAQHLEKLISVARERDAYLAE 121 Query: 122 ERRVNPDDSKED 133 RR +D Sbjct: 122 VRRDARPAGDDD 133 >UniRef50_B2S4C7 Ribosome-binding factor A n=4 Tax=Treponema RepID=RBFA_TREPS Length = 126 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 69/111 (62%), Gaps = 3/111 (2%) Query: 7 RPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++ + ++ EIA I+ +IKDPR+ +V+ V++S + A+VYV+ K + Sbjct: 8 RVRKLGEHIRAEIAQLIMLGKIKDPRVSPFLSVNWVDVSGGMVCARVYVSSFMGKYK--T 65 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 K G++ L+ A+GFIRS+L K +RLR P L+F YD S+ +G +S + + Sbjct: 66 KQGVQGLESAAGFIRSVLAKKLRLRQCPRLSFVYDESVRDGFSLSRKIDRL 116 >UniRef50_D0MI92 Ribosome-binding factor A n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI92_RHOM4 Length = 126 Score = 117 bits (295), Expect = 9e-26, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 5/110 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R QRV +++E+A ILQ E D +L MTTV+ V+ +RDL+ AKVYV+ ++ + Sbjct: 6 RVQRVGSLLKRELADILQFEFGD-QLPPMTTVTDVQPTRDLSIAKVYVSIYGTPEQK--R 62 Query: 67 AGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVT 114 A + LQE + IR+ L + +R LR +PEL F D +L R+ L+ Sbjct: 63 AAFRRLQELTPQIRAALAQRIRYQLRFMPELRFVLDETLERAQRVEELLA 112 >UniRef50_A6GK84 Ribosome-binding factor A n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GK84_9DELT Length = 153 Score = 117 bits (295), Expect = 9e-26, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 5/116 (4%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRL--GMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 R QRV + +++E+A +L R E++DPRL +V+GV +S DL+ A +YV L + Sbjct: 2 SRRRQRVEELLRREMAQMLLRGELRDPRLQPASAVSVTGVSVSPDLSVATIYVDVL--TE 59 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 +++ + AL+ G IR LG+ ++LR PEL F +D+S+ G R+ ++T + Sbjct: 60 ALRLESVLAALRAGGGAIRRKLGERVQLRRTPELRFHHDDSIERGNRVEAILTELR 115 >UniRef50_C0EAK4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EAK4_9CLOT Length = 115 Score = 117 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 70/114 (61%), Gaps = 4/114 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 + R+A+++++E++ +L R++KDPR+ G M + VE++ D ++AKVYV+ + + +A Sbjct: 5 KVARLAEDIKRELS-VLVRDLKDPRIKGKMLSFVRVEVTNDQSFAKVYVSSM--EGMEAA 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K ++ L+ ASGF++ L + +R P++ F D+S+ ++ L+ + Sbjct: 62 KEAVEGLKSASGFVKRELSNTLHMRKCPDIKFIPDDSIEYSAHLNKLLLDIETE 115 >UniRef50_C7JG37 Ribosome-binding factor A n=8 Tax=Acetobacter pasteurianus RepID=C7JG37_ACEP3 Length = 154 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 5/131 (3%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV +E+++ +A + R +DP L + TV+ V +S D +A V++T L D Sbjct: 27 SQRQLRVGEEVRRVLAEVFARTTFRDPDLVDVDLTVTEVRLSPDFRHATVFITRLGRSD- 85 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 V + AL+ + ++R+ L +R R VPEL F D +L M M L+ S + Sbjct: 86 --VAELLPALKRVAPWLRTQLAHKIRARTVPELHFQPDTALDTAMHMDTLLRSPEVQRDL 143 Query: 123 RRVNPDDSKED 133 + D+ ED Sbjct: 144 NAASEDEESED 154 >UniRef50_A4QEZ1 Ribosome-binding factor A n=8 Tax=Actinomycetales RepID=RBFA_CORGB Length = 149 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 4/124 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND- 59 MA + R R+A+ +Q +A ++R+IKD RL +T ++ V M+ DL AKV+ T Sbjct: 1 MA-DNARAARMAKRIQTIVASAIERDIKDRRLEFVT-ITDVTMTGDLHDAKVFYTVRGAS 58 Query: 60 -KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 ++E ++A +AL A G +R ++G+ + +R P LT+ D M L+ K Sbjct: 59 IEEEPDLEAAAEALHRARGQLRKIVGQQLGVRFTPTLTYSIDTVPEASAHMEALLDRARK 118 Query: 119 HDEE 122 DEE Sbjct: 119 RDEE 122 >UniRef50_A8PNL0 Ribosome-binding factor A n=1 Tax=Rickettsiella grylli RepID=A8PNL0_9COXI Length = 130 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 6/131 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN- 58 M K R R+A ++KE++ IL +EI D RL +T ++ V++SRDL+YA + T L+ Sbjct: 1 MQKNSNRVARIADLIKKELSNHILNKEIADSRLKFIT-ITSVKVSRDLSYADILFTQLSV 59 Query: 59 ---DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 D+ + + ++ +++AS +R L + + L +P L FFYD+ L E R+ L+ Sbjct: 60 ENSDEKQKDKELAVQLVRKASARLRYALAQRLHLYKIPRLRFFYDDFLEESHRLHCLIEQ 119 Query: 116 VVKHDEERRVN 126 + D+ +R Sbjct: 120 AMTKDKSKRTE 130 >UniRef50_C6W5Y8 Ribosome-binding factor A n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5Y8_DYAFD Length = 127 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 9/128 (7%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+V +++QK++ I Q++ + G T++ V ++ DL+ A+ Y++FL DK++ Sbjct: 2 ESKRQQKVGRQIQKDLGEIFQKDAQHLTHGSFVTITAVRVTPDLSIARAYLSFLPDKNKT 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVV---- 117 + ++ ++E + FIR L + +R LRIVP L F+ D++ +M L +V Sbjct: 62 ML---LETIRENTRFIRQKLAERVRHQLRIVPHLQFYIDDTAEYAAKMDQLFADLVIPPA 118 Query: 118 KHDEERRV 125 + DEE Sbjct: 119 QPDEEEDT 126 >UniRef50_B8DW44 Ribosome-binding factor A n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DW44_BIFA0 Length = 217 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL--N 58 M R R+A +Q+ IA ++ + D RL +T ++ V+++ DL AK+Y T L + Sbjct: 1 MQGTNSRAARIAALIQRVIASNMESTLHDKRLKNVT-ITDVKVTNDLQLAKIYWTTLSRD 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +E K +AL +A G +R+++G LR+ P+L F +D E + ++++ K Sbjct: 60 GHEEGERKRAKEALNQAKGRLRTMVGAKAGLRLTPQLQFIFDEVPGEAHEIEDILSLARK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_Q46HR0 Ribosome-binding factor A n=2 Tax=Prochlorococcus marinus RepID=RBFA_PROMT Length = 123 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 71/125 (56%), Gaps = 4/125 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLND 59 MA R +++A +++E++ +L I+D R+ M T++ VE+S DL +AK++++ Sbjct: 1 MA-NSRRVEKLAALLKREVSELLVNGIRDERIHQAMITITSVEVSGDLQHAKIFISLFG- 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 +E + L+EA GFIR+ L + +++R PEL F D + +G + +L+ ++ Sbjct: 59 -EEKKKDEVLVGLEEAKGFIRAELAQRLQMRRSPELVFKIDKGMTKGPAVLDLLNALELE 117 Query: 120 DEERR 124 + + Sbjct: 118 RKSKD 122 >UniRef50_D0WR20 Ribosome-binding factor A n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WR20_9ACTO Length = 179 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 5/122 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M R RVA+ + + +A ++ +KDPRL + TV+ V ++ DL +A V+ T D Sbjct: 1 MPN--PRANRVAERIHEIVASLVTNRLKDPRLE-LVTVTDVRVTGDLQHATVFYTAYGD- 56 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + ++ +AL A G IRS +G+ + LR+ P + F D + + + + D Sbjct: 57 -QRKLRDAGRALNRAKGNIRSHVGRQLGLRLTPTIEFTADALPETARSLEDALAAARHRD 115 Query: 121 EE 122 E Sbjct: 116 AE 117 >UniRef50_Q7URR1 Ribosome-binding factor A n=2 Tax=Planctomycetaceae RepID=RBFA_RHOBA Length = 137 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 5/132 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R + A+ +++ +A + E++DPR+ +T + GVE+S D+ AKV V+ + D+ + Sbjct: 2 SSRRLLKAAEAIREVVANAIVTEVRDPRVRDVTVI-GVEVSPDMREAKVKVSVMGDETQK 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE-- 121 + ++ LQ ++GF++S + M R P+L F D M +S ++ + + E Sbjct: 61 NL--SLRGLQNSAGFLQSKIANRMDTRYTPKLRFEVDRGQENAMTVSEILARIQQEKEGA 118 Query: 122 ERRVNPDDSKED 133 + +DS ED Sbjct: 119 TDDRDQNDSGED 130 >UniRef50_A8SMZ5 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMZ5_9FIRM Length = 132 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 3/120 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R R+ E+ + ++ + IKD R+ +T ++ V ++ DL V + D Sbjct: 4 KRLGRIESEINRVLSDAIYNGIKDNRIDPSITNITKVSVTNDLGICYVSIGVFGDT--KT 61 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + +K L+ A+G+++ + + + LR P+L F D S + M+ L+ V K D E+R Sbjct: 62 KEKTMKGLESATGYMKKRISETLDLRHTPKLIFKLDESFEKAALMNELIIKVSKEDREKR 121 >UniRef50_B6IVF9 Ribosome-binding factor A n=1 Tax=Rhodospirillum centenum SW RepID=B6IVF9_RHOCS Length = 178 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 7/132 (5%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV +E++ +A IL+R + +DP L + TV+ V +S DL A +V L Sbjct: 16 SQRQLRVGEEIRHALADILRRGDFRDPGLQDVNVTVTEVRVSPDLKNATAFVMPLGGGHP 75 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VVKHDE 121 + I AL A+ F R+ + A+RL+ P + F D S R+ L+ V D Sbjct: 76 E----VIAALNHAAPFFRAQIAHAVRLQHAPRIGFQEDTSFAYADRIDRLLHDPAVARDI 131 Query: 122 ERRVNPDDSKED 133 R ++ + D Sbjct: 132 TRDLDAEGVPLD 143 >UniRef50_C8QYE1 Ribosome-binding factor A n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYE1_9DELT Length = 135 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 4/117 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 RP R+A E+++E+A +L +++DPR+ +T + ++ DL+ A++Y + DE A Sbjct: 23 RRPDRIADEIRQEVAALLVAKVQDPRVAKVT-ILRATVTPDLSQARLYYSVF---DEAAA 78 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 K L A GFIRS L K + LR+VP L F +D SL E ++ + + +EE Sbjct: 79 AEAAKGLASAKGFIRSSLAKNLALRVVPALIFEHDRSLAEQEKLERIFQEIKAGEEE 135 >UniRef50_D0WDY7 Ribosome-binding factor A n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WDY7_9ACTN Length = 158 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 9/129 (6%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ ++ ++ ++ +A IL E+ DPRL + T++G E+S D +Y V+ T D Sbjct: 2 KQSNANRKTNEQAREILANILLFEVSDPRLR-LVTITGCEVSYDRSYCNVFYT----SDP 56 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + A G IRSL+G + R+ PEL F D S+ E R+ + H+ Sbjct: 57 GTYEEAAAGFSAARGRIRSLMGARLTWRVTPELRFLLDPSVDEAERI----ARALAHEAS 112 Query: 123 RRVNPDDSK 131 R P +++ Sbjct: 113 RIPVPSETE 121 >UniRef50_B3QZW6 Ribosome-binding factor A n=4 Tax=Candidatus Phytoplasma RepID=RBFA_PHYMT Length = 114 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 67/112 (59%), Gaps = 3/112 (2%) Query: 8 PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 +++A ++KE+ALI+ I++ ++G V+ V+++ DL++A VY LN++ E A Sbjct: 5 NEKLASLIKKELALIINVSIRNNKIG-FINVTEVKLTNDLSFANVYYVILNNQPEFLSLA 63 Query: 68 GIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + +++ IR LL K +R +R +PEL F YD SL G + N++ + K Sbjct: 64 A-EIIEKNKSTIRMLLAKKIRNIRKIPELVFIYDTSLEYGNHIDNILKGINK 114 >UniRef50_B1CB53 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CB53_9FIRM Length = 121 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 3/117 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RV + ++ E++L+++ E+ DPRL + +V V+ + DL YAKVYV+ + + ++ Sbjct: 4 RIERVNELIKNELSLLIELELNDPRLKEAIISVVRVKATPDLKYAKVYVSVMGENNKK-- 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + I L +A GF+R + K + R PEL F DNSL M + ++ + D+E Sbjct: 62 EEIIGVLDKAKGFLRKSIAKVLNTRNTPELIFELDNSLDYAMHIDEVLAGLDIKDDE 118 >UniRef50_Q0AK66 Ribosome-binding factor A n=2 Tax=Hyphomonadaceae RepID=RBFA_MARMM Length = 141 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 6/132 (4%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + ++ + I+ RE +DP L G M +V+ V S DL AKVYV L D Sbjct: 13 SQRQLRAGELVRHALVGIIAREEFRDPDLEGQMISVTEVRPSPDLRVAKVYVAPLGRGDS 72 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VVKHDE 121 + A L + F+R LG+ + ++ PEL F DNS + +L+ V+ D Sbjct: 73 AKLAA---GLNRCAAFLRGRLGREIEMKFTPELHFHADNSFDTASHVDDLLNRPTVRKDL 129 Query: 122 ERRVNPDDSKED 133 + + ED Sbjct: 130 DATRGSEADAED 141 >UniRef50_D1Y7J4 Ribosome-binding factor A n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7J4_9BACT Length = 131 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 9/131 (6%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ ++Q+EI+LIL RE++D +L + V+ VE S+DL YAKVY T L E+ Sbjct: 5 RMGRINSQLQREISLILSREVRDEKLAEVI-VTSVECSKDLKYAKVYYTTL---REEGRA 60 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV-----KHDE 121 K L++ SG++RS LG+ + R VPELTF +D+S M ++ + + E Sbjct: 61 EIAKLLEKVSGYVRSSLGRVLSYRTVPELTFRFDDSEELAREMDRVLDRISAELPPEESE 120 Query: 122 ERRVNPDDSKE 132 P++S + Sbjct: 121 AAEDAPEESDD 131 >UniRef50_A4S0F7 Predicted protein (Fragment) n=3 Tax=Mamiellales RepID=A4S0F7_OSTLU Length = 171 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 15/134 (11%) Query: 6 GRPQRVAQEMQKEIALILQREIK-------------DPRLGMMTTVSGVEMSRDLAYAKV 52 R Q+V Q+M++EI+ ++Q + D L +M TV+ VE+S DL KV Sbjct: 8 RRVQKVQQQMRREISSMMQSDKNLRAMISPEERMGVDHMLSVMATVADVEVSNDLQVVKV 67 Query: 53 YVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNL 112 YV+ L D E IK ++ ++R +G+ M LR+ PE+ F YD+S G ++S L Sbjct: 68 YVSILGD--ERGKNNAIKGMKRMEQYVRRKIGRRMSLRLTPEIRFIYDDSFERGQKVSAL 125 Query: 113 VTSVVKHDEERRVN 126 + + + + Sbjct: 126 LDEIRLENRNKTAK 139 >UniRef50_D2QJ35 Ribosome-binding factor A n=2 Tax=Flexibacteraceae RepID=D2QJ35_9SPHI Length = 126 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 8/131 (6%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+V++++QK+++ I QR++ G TV+ V +S DL+ A+VY++FL K++ Sbjct: 2 ESKRQQKVSRQLQKDLSEIFQRDVPHLFNGAFITVTSVRISPDLSVARVYLSFLATKNKQ 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + ++ +QE +R LG +R LRIVPEL FF D++ +M L + + D Sbjct: 62 LL---LETIQEKGKVLRQHLGDRVRHQLRIVPELHFFLDDTADYADKMDKLFSGL---DI 115 Query: 122 ERRVNPDDSKE 132 D+ E Sbjct: 116 PPAPAEDEDDE 126 >UniRef50_B0MY67 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY67_9BACT Length = 114 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 68/114 (59%), Gaps = 5/114 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q++A+++Q+++A I Q+E + G++ TV+ V +S D +YAK+YV+ + Sbjct: 2 ETTRQQKIAKQIQRDMAEIFQKEGAEIVRGVLVTVTAVRVSPDFSYAKIYVSVFPFEQNA 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTS 115 AV + L++ + F+R LG+ +R L+ VPE+ FF D+SL ++ + Sbjct: 62 AV---MATLEQHNWFLRRALGQRIRNQLKTVPEIQFFLDDSLEYIEQIDRAMHR 112 >UniRef50_UPI00016C38FF probable ribosome-binding factor A n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38FF Length = 163 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 68/129 (52%), Gaps = 3/129 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 + R RV++ +++ A + EIKDPR+ +T V+ E+S DL +AKV+V+ + + E Sbjct: 2 KSHRLARVSEVVRETAANAILFEIKDPRVKNVT-VTRAEVSADLQHAKVFVSVMGSEKEQ 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 ++ + L+ A+ ++++ + + R VP +TF D + + + ++ ++ + E Sbjct: 61 SL--TMHGLKSAAAYVQTKIADRLTSRYVPHVTFILDEGVKKSIEIARIIREENERLEAD 118 Query: 124 RVNPDDSKE 132 R E Sbjct: 119 RGAAQTPPE 127 >UniRef50_C9M6R1 Ribosome-binding factor A n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R1_9BACT Length = 130 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 5/113 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ ++ +EI+ IL ++KD + V+ V+ S+DL YAKVY T L K Sbjct: 5 RMDRINSQLMREISRILMSDVKDE-VASQAIVTSVDCSKDLKYAKVYYTALT----ARRK 59 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + +AL++ +GF+R LG +R R VP LTF +D + + +M L+ VV Sbjct: 60 SLAEALEKVAGFVRKTLGSRLRYRTVPLLTFVFDETEEKARQMDTLLDQVVTD 112 >UniRef50_B8ZRT3 Ribosome-binding factor A n=7 Tax=Actinomycetales RepID=RBFA_MYCLB Length = 164 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 4/115 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + R +R+A+ + +A ++ EIKDP L +T V V+++ DL A V+ T + Sbjct: 1 MADQ-ARARRLAKRICTIVASAIEFEIKDPGLDGVTIV-DVKVTADLHDATVFYTVMGRT 58 Query: 61 DEDAVK--AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 EDA A AL A G +RS +G +R P LTF D + RM L+ Sbjct: 59 LEDAPDYTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRDTTSDSVARMEELL 113 >UniRef50_A5FV22 Ribosome-binding factor A n=4 Tax=Acetobacteraceae RepID=RBFA_ACICJ Length = 140 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 11/126 (8%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R +RVA++++ +A + R E +DP L + TV+ V MS DL +A V+V+ L D Sbjct: 18 SQRQRRVAEDLRHRLAELFARTEFRDPELAGVHITVAEVRMSPDLKHATVFVSRLGATD- 76 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV------TSV 116 + + AL+ + F+R +G +R++ VP+L F D++L E R++ L+ + Sbjct: 77 --IDRYLPALKRIAPFLRGEIGHGLRMKFVPDLHFQPDHALDEATRINELLHRPEVMRDL 134 Query: 117 VKHDEE 122 +K DEE Sbjct: 135 LKPDEE 140 >UniRef50_C1TMK9 Ribosome-binding factor A n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMK9_9BACT Length = 146 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +RV +E+Q+EI+ +L+ +KD V+GV+ ++DL AKVY T ++ +D +V Sbjct: 23 RIERVNKELQREISRLLEFSVKDENAKRAV-VTGVDCAKDLKSAKVYFTTISPEDRRSVS 81 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 L++ F+RS L + +R+R VPEL F YD S G + L+ VV H+E Sbjct: 82 ES---LKKVRTFLRSSLAQTLRIRTVPELRFIYDTSGEYGRSIDRLLDMVVTHEENTDYV 138 Query: 127 PDDSKE 132 D E Sbjct: 139 EGDDGE 144 >UniRef50_B2S1E6 Ribosome-binding factor A n=2 Tax=Borrelia RepID=RBFA_BORHD Length = 119 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 4/122 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M KE R ++ + +EI IL + IKDPR+ TV VE+S DL AKV++ + Sbjct: 1 MEKEI-RKSKLESLLVQEIGNLILTKGIKDPRVHEFLTVVRVEISNDLINAKVFIGSI-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K+ ++ +KAL A GFI+ + K +R+R P+L+F D+++ + ++ ++ ++ Sbjct: 58 KEGASLDNAVKALNNAKGFIQGEIVKRIRVRNTPKLSFLRDDTISKAFYVNKIIENLSFS 117 Query: 120 DE 121 DE Sbjct: 118 DE 119 >UniRef50_C0VVG3 Ribosome-binding factor A n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVG3_9CORY Length = 160 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 4/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND- 59 MA + R R+A+ +Q +A L+ EIKD L +T V+ ++ DL A VY T Sbjct: 21 MADKV-RAGRMAKRIQTIVATALEHEIKDWHLEYIT-VTDCSLTGDLHDATVYYTVRGKT 78 Query: 60 -KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +E A ++L G +R ++G + +R P L+F D M +L+ Sbjct: 79 LDEEPDYAAAAESLNRWKGRLRKIVGDQLSVRFTPTLSFELDTVPESRAHMEDLLARARA 138 Query: 119 HDEERR 124 DEE R Sbjct: 139 RDEEVR 144 >UniRef50_C2BRN5 Ribosome-binding factor A n=3 Tax=Mobiluncus RepID=C2BRN5_9ACTO Length = 145 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 3/95 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R ++VA + +A +L +IKDPRLG +T ++ VE++ DL +AKVY T E Sbjct: 4 TRREKVAANILTTVASMLAGKIKDPRLGFVT-ITSVEVTGDLQHAKVYYTAYGSDTERT- 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 A AL+ A G IRS +GK + R+ P L F D Sbjct: 62 -ASGAALESAKGLIRSRVGKNLGTRLTPTLEFVSD 95 >UniRef50_Q5NQ28 Ribosome-binding factor A n=3 Tax=Zymomonas mobilis RepID=RBFA_ZYMMO Length = 141 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 8/129 (6%) Query: 7 RPQRVAQEMQKEIALILQR-EIK-DPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 RP RV ++++ +A +L R EI D + ++S V M+ DL A V+V L +D Sbjct: 13 RPLRVGEQIRHVLAEMLMRGEIHGDTLDNLFVSISEVRMTPDLRIATVFVKSLGGASDDT 72 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 V I L + + F+++ + K +RL+ VP+L F D S +G R+ +L+ S +R Sbjct: 73 V---IGILSKNASFLQAAIAKKIRLKYVPKLRFLADESFEQGSRIDSLLRS---PHVQRD 126 Query: 125 VNPDDSKED 133 + +D +ED Sbjct: 127 LQENDDQED 135 >UniRef50_D1BAC0 Ribosome-binding factor A n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1BAC0_THEAS Length = 137 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ +E +EI+L+LQ +KD R M ++GV S+DL+ AKVY T L+ + V+ Sbjct: 5 RIERLNKEFLREISLLLQGRVKDDR-AKMAILTGVSCSKDLSVAKVYFTVLDRSKVEEVR 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK------HD 120 L+ ASG IR +LG+ MRLR +PE F YD++ R+ ++ S+ D Sbjct: 64 L---GLEGASGLIRGMLGREMRLRKIPEFRFIYDDTEDRAGRVDAILDSIAPTPAMGNQD 120 Query: 121 EERRVNPDDSKED 133 + ++ D +E+ Sbjct: 121 DIEELDEDWQEEE 133 >UniRef50_UPI00016C0EBD ribosome-binding factor A n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EBD Length = 116 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 70/112 (62%), Gaps = 5/112 (4%) Query: 10 RVAQEMQKEIALILQRE-IKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 RV +E+QKE+A I++ + IKD R+ +M +V+ V+ + DL AK++++ L D +D V Sbjct: 8 RVNEEIQKEVAEIIRGDSIKDARMKDIMVSVTAVDTTTDLKNAKIFISVLQDNKKDDV-- 65 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + L +S FIR L + + LR PE++F DNS+ G++M+ ++ V+ Sbjct: 66 -LDVLNGSSKFIRKELARRINLRNTPEISFKLDNSIAYGIKMAKIIHEVMDK 116 >UniRef50_A9ITX2 Ribosome-binding factor A n=5 Tax=Bordetella RepID=RBFA_BORPD Length = 136 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 5/114 (4%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 GR R+A ++QK++A ++QRE+ R G + T+SGVE+S D A+AKVY T L + Sbjct: 11 GRNLRLADQIQKDLAGLIQRELDMSRAG-LITLSGVELSADYAHAKVYFTVLGAEP---- 65 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 A L E +G++ S L K + + VP L F +D + G+ MS L+ + Sbjct: 66 DAAAALLNEKAGWLHSQLYKLLHIHTVPTLRFVHDAQIARGIEMSALIDRANRP 119 >UniRef50_Q8RHJ7 Ribosome-binding factor A n=14 Tax=Fusobacterium RepID=RBFA_FUSNN Length = 120 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 68/121 (56%), Gaps = 6/121 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 M K+ R + + +E+ + I+ +L E+K+P++ + +V+ V+++ DL +A Y + L Sbjct: 1 MKKQ--RLEGIGKEIMRVISKVLLEEVKNPKIKGLVSVTEVDVTEDLKFADTYFSILPPL 58 Query: 59 --DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D+ + + ++AL E GF+R + + + +R PE+ DNS+ ++++ L+ + Sbjct: 59 KSDEKKYDHEEILEALNEIKGFLRKRVAEEVDIRYTPEIRVKLDNSMENAIKITKLLNDL 118 Query: 117 V 117 Sbjct: 119 K 119 >UniRef50_D2MK31 Ribosome-binding factor A n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MK31_9BACT Length = 117 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 3/106 (2%) Query: 18 EIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASG 77 E+A IL R+ KDPRL +T V+ VEM+ DL A VYV+ L ++ E + K L ASG Sbjct: 2 EVADILARKCKDPRLRFVT-VTDVEMNNDLRKAYVYVSLLGNQVE--TETVGKILDNASG 58 Query: 78 FIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 F+R LG+ + LR PE++F +D+ ++ ++ +V E Sbjct: 59 FVRLELGRRLELRYTPEVSFRFDSGGSRAEKIGLILDAVRPESESE 104 >UniRef50_B0SH19 Ribosome-binding factor A n=2 Tax=Leptospira biflexa serovar Patoc RepID=RBFA_LEPBA Length = 149 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Query: 7 RPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++ E+ ++I+ IL+ ++KDPR+ + + +E+S DL YAKVY T L + +E Sbjct: 5 RMKKLESEIIRQISTAILEGKVKDPRV-FLPSFHRIEISEDLKYAKVYFTALCNNNER-- 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD--EER 123 K + L +GF+ S +GK +RL P+ TF +DNS ++ + ++ L+ EE Sbjct: 62 KKLTQGLVSCAGFLSSFVGKNLRLHTNPKFTFVWDNSYIKSLEVNRLIDDSAPKTLFEEL 121 Query: 124 RVNPDDSKED 133 NP++ D Sbjct: 122 HPNPEEDDGD 131 >UniRef50_B8EIA6 Ribosome-binding factor A n=7 Tax=Rhizobiales RepID=RBFA_METSB Length = 155 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RVA+ ++ ++ +L R +I DP L G + TV V MS DL A VYV L ++ Sbjct: 13 SQRMLRVAELVRHAMSELLTRSDINDPALEGKVITVPDVRMSPDLKLATVYVMPLGGEN- 71 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VVKHDE 121 V + AL +R + + + LR P++ F D ++ L++S VK D Sbjct: 72 --VTEVLAALDRHKKLLRGEIARRVSLRFAPDVRFKADPGFEYSGKIDALLSSPKVKQDL 129 Query: 122 E 122 E Sbjct: 130 E 130 >UniRef50_B3QUN3 Ribosome-binding factor A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RBFA_CHLT3 Length = 125 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 7/126 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +RVA+ +Q+E++ I ++E+ PR G++TT+ GV+++ DL+ A+VYV+ L K+ A Sbjct: 4 RTERVAELIQRELSGIFEKEL--PRSGVLTTIVGVKITPDLSIARVYVSILGSKEMGA-- 59 Query: 67 AGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + +Q+ + R LL +R + +P L F+ D+ + ++ L+ Sbjct: 60 SVMAHIQKENKHFRKLLSSKIRHQFKRMPSLEFYQDDLFDQAAHINELIRKAN-EASSPT 118 Query: 125 VNPDDS 130 PDD Sbjct: 119 PKPDDE 124 >UniRef50_A7IC07 Ribosome-binding factor A n=35 Tax=Rhizobiales RepID=RBFA_XANP2 Length = 151 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV + ++ +A +LQR + DP L + TV V MS DL A YV L KD Sbjct: 12 SQRMLRVGELVRHALADVLQRGSVTDPVLAAHIITVPEVRMSPDLKIATCYVMPLGGKD- 70 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + IKAL + ++R +G+ M L+ VPEL F D S EG RM L+ S Sbjct: 71 --ITPVIKALAANARYLRLEVGRRMELKSVPELRFREDTSFDEGARMDALLRS 121 >UniRef50_B0MQX5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQX5_9FIRM Length = 126 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 9/127 (7%) Query: 8 PQRVAQEMQKEIALILQREIKD-PRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R+A+++++EI+ + R+IKD + M VS E++ DL+Y KVY+T L D K Sbjct: 6 TARLAEDIKREISTAM-RDIKDGAVVKAMVGVSRCELTSDLSYCKVYITTLEGGD--TTK 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 + L++A GF + + + +++R +P+L F DNS+ +S +++ + K Sbjct: 63 NVAEHLKKAEGFFKRRINERVKMRKLPQLIFVPDNSMDYYEHISEVISKLPKP-----AE 117 Query: 127 PDDSKED 133 PDD+ +D Sbjct: 118 PDDNGDD 124 >UniRef50_C8WI33 Ribosome-binding factor A n=3 Tax=Coriobacteriaceae RepID=C8WI33_EGGLE Length = 145 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 5/131 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ ++V ++ ++ IA IL EI DPRL + T++G E+S D + V+ T D+ E Sbjct: 2 KQSSSNRKVNEQAREVIAGILLFEISDPRLE-LVTITGCEVSYDRSVCNVFYTTEPDRYE 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 D A Q+ASG IRSL+ + + RI PEL F D S+ E R+++ + ++ Sbjct: 61 D----VAAAFQKASGRIRSLMARKLSWRIAPELRFLLDKSVDEAERIASALERDAARNKV 116 Query: 123 RRVNPDDSKED 133 D D Sbjct: 117 AAPTDSDVPAD 127 >UniRef50_B9KAB3 Ribosome-binding factor A n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KAB3_THENN Length = 132 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 4/111 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R + E+QK + LQ +++DPRL T S VE+S+D YA VYV+FL +E Sbjct: 9 RKAMLESEIQKLLTEALQ-QLRDPRLKKEFVTFSRVELSKDKRYADVYVSFLGSPEER-- 65 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + ++ L A GF R+ + K ++L + PE+ F+ D + +R+ L+ + Sbjct: 66 REAVEILNRAKGFFRTYVAKNLKLYVAPEIRFYEDKGIEASVRVHQLLNQL 116 >UniRef50_C6HXK3 Ribosome-binding factor A n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXK3_9BACT Length = 120 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 6/122 (4%) Query: 1 MAKEF--GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 M K+F R RVA E+++ +A ++ R ++PR+ +T ++ V +S DL A V+ Sbjct: 1 MRKDFGFRRADRVASEIREIMATVVARYFREPRIASVT-ITRVRLSDDLRNATVFFAVFP 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +D ++ + L+ S +R + + +R++ +P L+F +DN E R+ +L + Sbjct: 60 GEDPQSMG---EILERHSPILRKEMARQLRIKYIPRLSFVHDNGNDEEGRIESLFDQISG 116 Query: 119 HD 120 D Sbjct: 117 ED 118 >UniRef50_B9XFC2 Ribosome-binding factor A n=1 Tax=bacterium Ellin514 RepID=B9XFC2_9BACT Length = 125 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 3/123 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R QRV + +++EI +++REI + TV+ V +S DL A V++ L + K Sbjct: 5 RLQRVRELLKREIGEVIRREIPVGE-SGLITVNEVGVSSDLHSATVFIGILGTDQQK--K 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 G L I+ L+G+A+ L+ P L F D S+ EG ++ ++ + K Sbjct: 62 KGFAQLNHHRKRIQGLVGQAVILKYTPTLRFVLDESIAEGNKVLQIIDELEKSGPNNETT 121 Query: 127 PDD 129 P++ Sbjct: 122 PEN 124 >UniRef50_A5CXX7 Ribosome-binding factor A n=4 Tax=Bacteria RepID=RBFA_VESOH Length = 114 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 5/110 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ + +++E+ L+L+ IKDPRL M ++ V +SRDL+ AKV+ T + ++ K Sbjct: 10 RVERINELIRRELTLLLRTSIKDPRLRDMI-ITDVLISRDLSSAKVFYTVI----KEDKK 64 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 L +ASGF R L K + LR P L F +D++ G R+ L++ + Sbjct: 65 MIEPLLDKASGFFRIHLSKTIDLRHTPVLRFIFDSAPNTGARIEQLLSKL 114 >UniRef50_B1LCH6 Ribosome-binding factor A n=8 Tax=Thermotogaceae RepID=RBFA_THESQ Length = 131 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 4/111 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R + E+QK + LQ +++DPRL T S VE+S+D YA VYV+FL +E Sbjct: 6 RKAMLESEIQKLLMEALQ-QLRDPRLKKDFVTFSRVELSKDKRYADVYVSFLGTPEER-- 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 K ++ L A GF R+ + K +RL + PE+ F+ D + +++ L+ + Sbjct: 63 KETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVKVHQLLVQL 113 >UniRef50_A3HU14 Ribosome-binding factor A n=1 Tax=Algoriphagus sp. PR1 RepID=A3HU14_9SPHI Length = 128 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+ A+ +QKEI I Q++ K M TV+ V +S DL AKVY++FL E Sbjct: 2 ESKRQQKYAKLIQKEIGDIFQKDAKHLVGRAMITVTHVLVSPDLGLAKVYLSFLLADPE- 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + K + + IR L K + +R++PEL FF D+S + +++ + Sbjct: 61 ---STYKLINDHKKEIRHQLAKRIGKSVRVIPELAFFPDDSASYAQHIEKVISDL 112 >UniRef50_A0NUK1 Ribosome-binding factor A n=3 Tax=Rhodobacteraceae RepID=A0NUK1_9RHOB Length = 170 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 8/129 (6%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV + ++KE++ IL R DP L G++ T+ V M+ DL A V L + Sbjct: 42 SQRQLRVGETVRKELSDILTRGRFSDPDLDGVIVTIPEVRMTPDLRLATCLVMPLGGVNA 101 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + V+ KAL ++ ++R + + + ++ +P+L F D + R+ L+ S + Sbjct: 102 ENVE---KALNRSAKYLRGQVSRRLTMKYMPDLRFVLDTRFDDDDRIGTLLHS---PEVS 155 Query: 123 RRVNPDDSK 131 R ++ D+ Sbjct: 156 RDLDEDEGD 164 >UniRef50_A3UIH6 Ribosome-binding factor A n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UIH6_9RHOB Length = 140 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 6/130 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLN 58 M + R R + +++ ++ I++ + DP + T++ +S DL +A VYV L Sbjct: 14 MKAQSQRQLRAGELVRRAVSDIIREGRVHDPHVNTAAVTITEARVSPDLRHATVYVDLLG 73 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VV 117 D +AV AL A+GFI+ LG+ + L+ P+L F D+ + + + L+ V Sbjct: 74 GGDREAVAT---ALNHAAGFIQRELGRQIELKFTPKLRFAVDDRIDDVREVDALLDRPSV 130 Query: 118 KHDEERRVNP 127 K D E Sbjct: 131 KRDLEDGDED 140 >UniRef50_A9G882 Ribosome-binding factor A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RBFA_SORC5 Length = 124 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 3/118 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF-LND 59 M+ R RVA+ ++++++ +L R+++DPR+ + VS VE++ DL AKV+V Sbjct: 1 MSGVVKRATRVAERLREDLSNLL-RDLRDPRIAGVL-VSRVEITDDLQSAKVHVRHEFGA 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 +D A +A +K L+ ASG +R + + M LR+VP L FFYD R+ L+ + Sbjct: 59 EDAAARRALLKGLEAASGRLRRDVARTMGLRVVPTLRFFYDEGPDAERRIEELLREIK 116 >UniRef50_A4X4N9 Ribosome-binding factor A n=4 Tax=Actinomycetales RepID=RBFA_SALTO Length = 156 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 3/117 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 + +R A+ +++ +A +++ +IKDPRLG M T++ ++ DL A V+ T L D A Sbjct: 5 AKVRRHAERVRELVASVVRSQIKDPRLG-MITITDARITADLRDATVFYTVLGDASAQAS 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A AL+ A G +RS +GKA+ LR P LTF D+ + + +L+ D E Sbjct: 64 TAA--ALESAKGMVRSTVGKALGLRHSPTLTFVLDDVQDQVKHIDDLLAQARHADAE 118 >UniRef50_B0PH14 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PH14_9FIRM Length = 118 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 66/117 (56%), Gaps = 3/117 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R +++ +E+ I+ R +KDPR+ + ++ ++++RDL++ KVY++ ++ Sbjct: 5 RASRTEEDIHRELCDIM-RGLKDPRVSGLISIVKLDLARDLSHCKVYISSMDGIAAAKSA 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 A L+ A GFI+ L ++LR +PE +F D+S+ ++ ++ + D+E Sbjct: 64 AA--GLRSAQGFIKRELNARLKLRKLPEFSFIADDSIAHSADIARILDGLHTQDQEH 118 >UniRef50_C0GUB2 Ribosome-binding factor A n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUB2_9DELT Length = 109 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 5/104 (4%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 R R+A + +E+ I+ E +DPRL + T++GV M++DL+ A+V T + Sbjct: 3 PATSRRATRMADSIMRELGRIIVEEARDPRLN-LVTITGVLMNKDLSIARVMYTHIQGPS 61 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 + KAL A GF+RS LG+ +++R VPEL F +D L E Sbjct: 62 PELE----KALGSARGFLRSSLGQNLKMRYVPELRFEWDTYLQE 101 >UniRef50_C8X0G5 Ribosome-binding factor A n=3 Tax=Desulfovibrionales RepID=C8X0G5_DESRD Length = 120 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 3/100 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R QR+ + +EI +L E KDPRL + T+SGV M+R+L A+V T +D++ Sbjct: 6 TRRAQRMGDTIMREIGHLLVEEAKDPRL-QLVTISGVRMNRNLQVAEVLFTHPEGRDKE- 63 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLV 104 + I AL+ ASGF+R+ LGK +RLR VP+L F +D L Sbjct: 64 -QEIITALESASGFLRTALGKRLRLRFVPQLRFTWDTFLE 102 >UniRef50_UPI0001745B62 ribosome-binding factor A n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745B62 Length = 163 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 6/130 (4%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV + +++E+ I+ R G + T+ V+++ DL +YV L E A Sbjct: 15 HRLARVRELIKRELGPIVDRNFT--FAGSVVTIHEVDVTPDLKQCFIYVGILG--KEHAA 70 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK--HDEER 123 ++ L E G I+ L K + L+ P LTF YD S+ G+R+ L+ ++ + DEE Sbjct: 71 PNIVRKLNENRGLIQRELFKRVILKNSPSLTFKYDTSIERGVRVLALIETLPEPLPDEEP 130 Query: 124 RVNPDDSKED 133 +D Sbjct: 131 VAEEGVDNDD 140 >UniRef50_C6XX51 Ribosome-binding factor A n=4 Tax=Sphingobacteriaceae RepID=C6XX51_PEDHD Length = 127 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 5/127 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+ A +Q+E+A I QRE + T++ V +S DLA AKVY++FLN + Sbjct: 2 ESKRQQKFAGVIQEELAAIFQREGSAYLPNTLVTITKVRVSPDLAVAKVYLSFLNTSN-- 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + + SG IR LG +R R+VP LTFF D++ +M L + + E Sbjct: 60 -TTLSVAEVNSHSGEIRYKLGARIRHQARVVPTLTFFVDDTNTYVEQMDKLFDKISRDRE 118 Query: 122 ERRVNPD 128 E + Sbjct: 119 ESGAREE 125 >UniRef50_B5RMZ6 Ribosome-binding factor A n=2 Tax=Borrelia RepID=B5RMZ6_BORDL Length = 129 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 4/122 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALIL-QREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K R ++ + +EI ++ R IKDPR+ TV VE++ DL KV+V + Sbjct: 11 MEKAI-RKSKLESLLVQEIGNLIVTRSIKDPRVHEFLTVVRVEIANDLINTKVFVGSI-- 67 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K+ ++ IKAL A GFI+ L K +++R P+L F D+++ + ++ ++ ++ Sbjct: 68 KEGVSLDNAIKALNNAKGFIQRKLVKRIKVRNTPKLNFIRDDTISKAFYVNKIIENLNFS 127 Query: 120 DE 121 +E Sbjct: 128 EE 129 >UniRef50_Q7V3G3 Ribosome-binding factor A n=7 Tax=Prochlorococcus marinus RepID=RBFA_PROMP Length = 132 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLND 59 M + R +++ ++KEI LILQ ++++ L +S +E+S DL + K+Y+T + Sbjct: 1 MPNNY-RIAKISSLLKKEITLILQNDLENDLLRSNFINISKIELSGDLQFCKIYIT--ST 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV--V 117 +E K ++ L A +IR LG+ + +R VPE+TF D L +G+ + L+ + Sbjct: 58 AEEAIRKEIVEELNLAKTYIRHTLGQRIEMRRVPEMTFKDDTVLEKGLSVLKLLAELKNK 117 Query: 118 KHDEERRVNPDDS 130 KH+++ +V ++ Sbjct: 118 KHNQDSKVEGNNK 130 >UniRef50_B0B9K3 Ribosome-binding factor A n=13 Tax=Chlamydiaceae RepID=RBFA_CHLT2 Length = 123 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 69/126 (54%), Gaps = 4/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLND 59 MA E R ++V +++ IA ++ +++K P++ T++ V +SRDL A VYV+ + Sbjct: 1 MA-ENRRMKKVNAMLREAIAKVILKDVKHPKISNRWITITRVSLSRDLQSACVYVSIMP- 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 E++ + + AL+ ++GFI K + L+ P+L F+ ++ + +L+ + + Sbjct: 59 -HENSQEETLAALKASAGFIAFQASKDLVLKYFPDLNFYVEDIFSPQDHIESLLLKIAEQ 117 Query: 120 DEERRV 125 D++ Sbjct: 118 DKKTNP 123 >UniRef50_A4E6U6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U6_9ACTN Length = 136 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ +R+ +++++++ IL E+ DPRL + T++ VE++ D ++A+VYV+ D Sbjct: 2 KQTQATRRLGEQLREKLGYILLFEVSDPRLD-LVTLTAVEVAVDRSFARVYVSC----DA 56 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-----V 117 ++AL A G IRSLL +++ R+ PEL F D S E R++ + +V + Sbjct: 57 SRYDEVMEALASAKGRIRSLLARSLDWRVTPELDFRIDRSTDEAERITRALENVPATLAI 116 Query: 118 KHDEERRVNPDDSKE 132 + DE+ D ++E Sbjct: 117 EKDEDGYPIADAAQE 131 >UniRef50_A9WPV9 Ribosome-binding factor A n=4 Tax=Actinomycetales RepID=RBFA_RENSM Length = 146 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R R+AQ ++ +A L++++K P + +T ++ ++ DL +A +Y T +A Sbjct: 5 ARAARLAQRIKVIVAEALRKQVKQPGVENIT-ITETRVTNDLQHATIYYTIFGGT--EAR 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + +L ++ G +R +GK + +R+ P L F D + L+ + D Sbjct: 62 QEAEDSLAKSKGILRREVGKNLTIRLTPTLEFISDEVPETASHVEELIRLAKERD 116 >UniRef50_Q1IIT5 Ribosome-binding factor A n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RBFA_ACIBL Length = 123 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +R+ + +++EI IL+ E+ DPR+G + TVS V ++ + A V V +E Sbjct: 11 ERLGEAIREEIGAILEGELGDPRIG-LVTVSEVMIASNGKSAIVLVAVAG--EEQEAVDT 67 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 ++ L A+G+IR + + LR+ PEL F D + G R+ L+ V K + R Sbjct: 68 LEGLAAATGYIRHEVAARLGLRVAPELLFRLDQTERYGGRVEELLKRVNKRKKSSR 123 >UniRef50_D0LZ88 Ribosome-binding factor A n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ88_HALO1 Length = 150 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 7/127 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLG--MMTTVSGVEMSRDLAYAKVYVTFLN 58 MA+ R QRV +++ + ++ RE+KDPR+ + +++ VE++RDL+ A +YV+F+ Sbjct: 1 MAQG-NRRQRVGNALREVLTELVARELKDPRVHAAGLVSINQVELNRDLSVAFIYVSFVG 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D A K + LQ A+GF+R + ++L+ PEL F D +M S+V+ Sbjct: 60 APDARAEKRALDGLQAAAGFLRGPAARRLKLQRAPELRFMDDPRGAFAEQM----RSLVR 115 Query: 119 HDEERRV 125 DE R Sbjct: 116 DDEVRAA 122 >UniRef50_Q2RMR9 Ribosome-binding factor A n=4 Tax=Rhodospirillaceae RepID=RBFA_RHORT Length = 164 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 5/111 (4%) Query: 7 RPQRVAQEMQKEIALILQRE-IKDPRLGMMT-TVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV +E++ +A + +R ++DP + + TV+ V +S DL A V++ L Sbjct: 12 RQLRVGEEIRHALAEVFERGTVRDPAVAGVALTVTEVRISPDLRNATVFLVRLGGGP--- 68 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + + L++A F+R + + + VP+L F D S ++ L+ Sbjct: 69 LDEVLTGLRKARAFLRREVAIRIHTKFVPDLRFESDPSFDYAEYINGLLHR 119 >UniRef50_Q2S1N8 Ribosome-binding factor A n=1 Tax=Salinibacter ruber DSM 13855 RepID=RBFA_SALRD Length = 132 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 4/127 (3%) Query: 8 PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 +RVA+ +Q+E+A ILQRE D RL M T++ ++ DL+ A +Y + + D E+ +A Sbjct: 5 TERVAELVQREVARILQREYAD-RLQPMVTITRARVTGDLSIAYLYASVMGDTAEE-REA 62 Query: 68 GIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + L+ + IR+ L +R +R +PEL FF+D SL E RM NL + + E R Sbjct: 63 TFRQLESLADEIRNQLASRIRHKVREIPELKFFHDESLEEAKRMENLFDRIREERERRLE 122 Query: 126 NPDDSKE 132 + +DS + Sbjct: 123 DGEDSAD 129 >UniRef50_Q6MMS5 Ribosome-binding factor A n=1 Tax=Bdellovibrio bacteriovorus RepID=RBFA_BDEBA Length = 134 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 3/128 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV +E+Q IA L R K P L + TV+ V+M DL AKVYV+ L D E Sbjct: 8 RRIARVEREIQATIAQFLIRGFKTP-LPGLVTVASVKMPADLRAAKVYVSILGD--EKQQ 64 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + LQE + I++ +GK +++R P+LTF+ D++ + +++ ++ + + Sbjct: 65 DEALDLLQERAFEIQNYIGKELKMRYCPKLTFYLDHATEQVLKVEKILHELELERKANNP 124 Query: 126 NPDDSKED 133 + D Sbjct: 125 GEGSDESD 132 >UniRef50_Q11P01 Ribosome-binding factor A n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=RBFA_CYTH3 Length = 133 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 75/129 (58%), Gaps = 8/129 (6%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+VA+ + KE+A I +E + + +++ V MS DL+ AK+Y++ + +D++ Sbjct: 2 ESVRQQKVARLILKEMADIFLKESRVLFGNVFISITVVRMSPDLSVAKLYLSIMLQEDKN 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSV---VK 118 A+ +K ++ + +R LLG+ +R +RI+PE+ F+ D+++ M ++++ + K Sbjct: 62 AI---LKEIKVHTKELRKLLGERIRKQVRIIPEIIFYLDDNVDYANHMDDVLSKITIPKK 118 Query: 119 HDEERRVNP 127 DE N Sbjct: 119 EDENFDPNQ 127 >UniRef50_Q1AW53 Ribosome-binding factor A n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RBFA_RUBXD Length = 122 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 4/123 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++ +++ + + + DPRL + TV+GV +S +L++A V+ + L D + Sbjct: 4 ARTRKIEARLKEIVGDEVA-SLSDPRLKGLVTVTGVRVSPNLSHATVFYSLLAGGDPEEA 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + + LQ A+G I++ +G RL+ P L F D ++ R+ + V D + Sbjct: 63 R---EGLQSAAGRIQAAVGAQTRLKRTPRLRFEPDPTVERVTRIQRTLREVSGEDGDGNG 119 Query: 126 NPD 128 + Sbjct: 120 TQE 122 >UniRef50_C1SPK3 Ribosome-binding factor A n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPK3_9BACT Length = 96 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 58/99 (58%), Gaps = 4/99 (4%) Query: 21 LILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIR 80 ++ +E+ DP++ + ++ +++++DL+ AKVY + N ++ ++ + L ++GFIR Sbjct: 2 DVIIKEVNDPKIKDVV-LTKIDVTKDLSIAKVYFSTYNKSAKEGIE---RGLNRSAGFIR 57 Query: 81 SLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + K +RL+ VP L F YD+S G ++ L+ + Sbjct: 58 HCILKGLRLKKVPTLRFIYDDSGDYGQKIDGLLKDITSE 96 >UniRef50_B1GZN7 Ribosome-binding factor A n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZN7_UNCTG Length = 121 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + R RV++ +Q+ I+ I+ RE+KD G + TV G ++ DL K+Y + L + Sbjct: 1 MPLSYKRSVRVSELIQQTISSIV-REMKDLDAG-LVTVMGANLTDDLLSCKIYYSVLGSE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + AGI L+ ++ +R L + LR P ++F YD+S ++ +++ + + Sbjct: 59 EYKKKVAGI--LKRSTKQVRHKLALRLNLRCTPTISFVYDDSNERATKVFDMLQRIEEEK 116 Query: 121 EE 122 ++ Sbjct: 117 DK 118 >UniRef50_B4CYQ3 Ribosome-binding factor A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ3_9BACT Length = 128 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 4/111 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RV + +++E+ +L RE+ + TV V+++ DL +A V+++ + ++ Sbjct: 3 HRLERVNELLKRELGELLSREVSFE--AALVTVQQVDITPDLKHAHVFISVIGSDEQA-- 58 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 +A + L ++ ++ LL K + L+ P L F D S+ G R+ N+++ + Sbjct: 59 RAAMAKLHDSRKNLQHLLSKRVVLKYTPHLHFKLDESIERGTRVINILSQI 109 >UniRef50_A8TZ00 Ribosome-binding factor A n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ00_9PROT Length = 130 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 6/127 (4%) Query: 10 RVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 RV +E+++ +A IL+R + DP L T+S V +S DL A V++T L D + Sbjct: 2 RVGEEIRRTLARILERGTLHDPALYHAPVTISEVTVSPDLRNATVWITRLGGGDATDL-- 59 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VVKHDEERRVN 126 + AL+ +G + LL + ++L+ P L F D++ R+ L+ + VV++D E Sbjct: 60 -LAALKRNAGRLGGLLARDIKLKYAPRLQFARDSAFDTSSRIDALLRNPVVRNDIEAEPA 118 Query: 127 PDDSKED 133 D E+ Sbjct: 119 EDADPEE 125 >UniRef50_B2S9F7 Ribosome-binding factor A n=38 Tax=Rhizobiales RepID=RBFA_BRUA1 Length = 150 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 6/114 (5%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV ++++ +A +LQR EI+D + + +VS V MS DL A ++T L D Sbjct: 14 SQRQLRVGEQVRHALAQVLQRGEIRDDLIERTVISVSEVRMSPDLKIATCFITPLGSADP 73 Query: 63 DAVKAGIKALQEASGFIRSLLGKAM-RLRIVPELTFFYDNSLVEGMRMSNLVTS 115 AV IKAL + FIR + ++ +++ +PE F D S ++ L+ S Sbjct: 74 QAV---IKALASHAKFIRGRVAPSLAQMKYMPEFRFRPDTSFDNFSKIDALLRS 124 >UniRef50_Q0SM49 Ribosome-binding factor A n=18 Tax=Borrelia burgdorferi group RepID=RBFA_BORAP Length = 120 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 4/118 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALIL-QREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K + ++ + +EI ++ R IKDPR+ TV VE S+DL AKV++ + Sbjct: 1 MYKNIKK-FKLESFIAQEIGNLIVSRGIKDPRIHSFLTVVKVEFSKDLINAKVFIGSI-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 K+ ++ +KAL A GFI+S + K +++R P+L F D+SL + ++ ++ + Sbjct: 58 KEGASLDNAVKALNNAKGFIQSQIIKRIKVRSTPKLLFVKDDSLSKSFYVNKIIEGLN 115 >UniRef50_C9LIQ3 Ribosome-binding factor A n=7 Tax=Prevotella RepID=C9LIQ3_9BACT Length = 134 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q++ + +QKE++ +LQR+ + G++ +VS V +S DL+ + Y++ + + Sbjct: 25 ETTRQQKIERLIQKELSDMLQRQTQQAP-GVLVSVSRVRISPDLSVCRGYLSVFPSERGE 83 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTS 115 + A I +R LGK +R LRI+PEL FF D+SL + L+ Sbjct: 84 EIVANI---NANVKTVRFELGKRVRHQLRIIPELKFFIDDSLDYIEHIDELLKQ 134 >UniRef50_Q3AQK8 Ribosome-binding factor A n=11 Tax=Chlorobiaceae RepID=RBFA_CHLCH Length = 123 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 7/127 (5%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +RVA +Q E+ I Q E+ PR + T+ V+++ DL A+VY++ + +E A Sbjct: 2 SRRTERVASLLQHELGAIFQLEL--PR-TPIVTIVEVKVTVDLGIARVYISTIGTPEEQA 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A + LQE + +IR LL + +R R +PEL F+ D+ + L++ V K + Sbjct: 59 --AIMAHLQEQNKYIRKLLSQRIRHQFRRIPELEFYEDHLYEHARHIEQLLSQVRKAPVD 116 Query: 123 RRVNPDD 129 P D Sbjct: 117 DAETPLD 123 >UniRef50_B9JYK7 Ribosome-binding factor A n=12 Tax=Rhizobiales RepID=RBFA_AGRVS Length = 137 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 9/132 (6%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV ++++ I +LQR E++D + + ++S V MS DL A YV+ L D Sbjct: 10 SQRMLRVGEQVRAAITQVLQRGEVRDDLIEKTVISISEVRMSTDLKVATAYVSPLGVSDH 69 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 D V I AL + +IR +G +R ++ +PE+ F D S ++ L+ S + Sbjct: 70 DTV---IAALNRHAKYIRGRIGGQLRQMKYMPEVRFRDDTSFDNYQKIDALLRS---PEV 123 Query: 122 ERRVNPDDSKED 133 R + PD+ K++ Sbjct: 124 ARDLGPDEDKQE 135 >UniRef50_A8J0V0 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0V0_CHLRE Length = 196 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 14/120 (11%) Query: 6 GRPQRVAQEMQKEIALIL------------QREIKDPRLGMMTTVSGVEMSRDLAYAKVY 53 R +VA +Q+EI + +R++ D L + +++ +S DL KV+ Sbjct: 66 RRVAKVASAIQREIGDMFVSDPVIQAAICPERKLGDDALSAVASITDTYVSNDLQVVKVF 125 Query: 54 VTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 V+ +D V ++ LQ ++R L+G+ +RLR+ PE+ F YD++ E ++ ++ Sbjct: 126 VSVYSDDYGKRV--AMENLQRLEPYVRRLIGQRVRLRLTPEVRFVYDDAEEEADLVARVI 183 >UniRef50_C8W718 Ribosome-binding factor A n=5 Tax=Coriobacteriaceae RepID=C8W718_ATOPD Length = 136 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 7/114 (6%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +F R R + +++++ IL EI DP L + T++ E+S D ++ +VYV+ + Sbjct: 4 NQFSR--RTNEVAREKLSWILLFEISDPDL-QLVTITSCEVSVDKSFMRVYVSC----EP 56 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D + + AL+ A G IRSLLG A+ R+ PEL F D + E R++ + V Sbjct: 57 DRYEKVLAALKRAKGRIRSLLGHALNWRVTPELDFKIDTTTDEAERIAQALEVV 110 >UniRef50_A6CF42 Probable ribosome-binding factor A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF42_9PLAN Length = 139 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 68/129 (52%), Gaps = 3/129 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +++AQ + + ++ + ++DPR+ +T + V+++ D+ AK+Y++ + D+ E A Sbjct: 3 SRRLEKIAQAILETVSTTILLHLRDPRIRNVTVLH-VDVAPDVQSAKIYISIMGDEKEKA 61 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + LQ A GF++S + ++ + P + F D ++ + + ++ + E Sbjct: 62 L--CMHGLQSAKGFLQSKIADRIQTKYTPVIKFVLDTAVKDSLDTIRILDELQVEREAEE 119 Query: 125 VNPDDSKED 133 + + S E+ Sbjct: 120 LAENSSSEE 128 >UniRef50_C6C0D1 Ribosome-binding factor A n=2 Tax=Desulfovibrio RepID=C6C0D1_DESAD Length = 117 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 3/101 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R ++ ++ +EIA +L EI DPRL M ++SGV M++D A+V T DK++ Sbjct: 6 SRRSVKMGDQIMREIATMLIEEIGDPRLE-MVSISGVRMNKDNKIAEVMFTMAGDKEK-- 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 + A +KAL +A G++RS L K +R+R +PEL F +DN L E Sbjct: 63 IAAAVKALDKAKGYMRSKLSKRIRVRQIPELRFVHDNFLEE 103 >UniRef50_D1AY63 Ribosome-binding factor A n=5 Tax=Fusobacteriaceae RepID=D1AY63_STRM9 Length = 124 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 58/115 (50%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R + + +E+ + I + E+K+ ++ + TV V +S D YA V ++ L+ K Sbjct: 2 NIRRKRGLEKEISRIIGTAILLEVKNEKIRNLVTVKSVNLSPDARYADVIMSILDYKQNI 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + ++ L + GF R +G+ + +R PE+ D+S+ +++S ++ + Sbjct: 62 NKEKLLEELNKLKGFFRKKVGENLEIRYTPEIRIHLDDSVEYSVKISKILKEAIA 116 >UniRef50_B5W1W9 Ribosome-binding factor A n=1 Tax=Arthrospira maxima CS-328 RepID=B5W1W9_SPIMA Length = 105 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%) Query: 42 EMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDN 101 + DL +AK++V+ E+A ++ ++ L+ A+G+IRS LGK +RLR PE+ F D Sbjct: 10 KCPGDLQHAKIFVSIYGT--EEARRSTMEGLRSATGYIRSHLGKHIRLRRTPEVVFLEDR 67 Query: 102 SLVEGMRMSNLVTSVVKHDEERRVNPDDSKED 133 SL G ++ L+ + + D ++ED Sbjct: 68 SLERGDKIIELLNQISHEHKNSDTAGDTTQED 99 >UniRef50_Q1NKW1 Ribosome-binding factor A n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKW1_9DELT Length = 131 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 4/106 (3%) Query: 11 VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIK 70 VA E+++E+A +L ++KDPR+ +T + ++ DL A++Y + L+D +A Sbjct: 29 VADEIRQEVATLLLAKVKDPRVEQVT-ILKATVTADLRQARIYYSVLHD---EAAADAAA 84 Query: 71 ALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 L+ A FIR L K + LR+VP L F D SL + + L+ + Sbjct: 85 GLESARSFIRRSLAKNLVLRVVPALIFERDRSLADQQHLEQLLAEI 130 >UniRef50_Q83ND3 Ribosome-binding factor A n=2 Tax=Tropheryma whipplei RepID=RBFA_TROW8 Length = 196 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 5/119 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ R R+A ++ I+ ++ +++D +LG + T++ V+++ DL +AKV+VT KDE Sbjct: 10 KDQIRAHRMAGRIRHLISRQIETKLRD-QLG-LVTITEVQVTGDLHHAKVFVTVYGTKDE 67 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + +K L++ R LG +++R VP + F D + M L+ + D+ Sbjct: 68 A--QTALKILEDNRANFRRSLG-VLKVRFVPTVEFELDRLFEDAGIMDELIQRARESDK 123 >UniRef50_C4XE44 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE44_MYCFE Length = 335 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 7/121 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K +R +++ +A I+ ++ + + + T+ E+S DL++ K+Y++F Sbjct: 11 MPKSINTLRR-ESQIRTLLAEIITNDLTNTNI-INPTLVDCELSGDLSHVKIYMSF---- 64 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + K G++ALQ ASG+IR++L K++ R VPEL F+ D + + + ++ + Sbjct: 65 -SENEKRGLEALQNASGYIRTILAKSLNWRKVPELHFYIDEVSKKCLSIDRILYDIKDEK 123 Query: 121 E 121 Sbjct: 124 N 124 >UniRef50_A6DGZ4 Ribosome-binding factor A n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DGZ4_9BACT Length = 119 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 5/124 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K+ R + V +QKE++ + RE+ P + TV+GV+ S DL + VYV+ + Sbjct: 1 MSKD--RMRSVDSTIQKELSSVFIREVF-PCFECLITVTGVKTSADLRHCNVYVSVMGSN 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + I+ L++ S + L K +R++ P + + D++ R+S+L+ S+ Sbjct: 58 QQK--EDVIRFLRDRSEEFFNHLSKRIRMKFTPVIHWHCDDTPETADRLSSLIDSIDIPS 115 Query: 121 EERR 124 E+ Sbjct: 116 EDED 119 >UniRef50_C1ZB80 Ribosome-binding factor A n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB80_PLALI Length = 197 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 3/126 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R + +Q + + ++L + R I+DPR+ +T +S E++ D+ A+V+V+ + E + Sbjct: 2 SRRLAKASQAVLETVSLTIMRHIRDPRVKNVTVLSA-EVAPDMRTARVHVSVMGTPKEQS 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + LQ A GF ++ + + R P LTF D + + S + V+ DE Sbjct: 61 L--CMHGLQSACGFFQAKIADRLETRYTPVLTFVLDQGVKLSIETSKALREVLPTDEADS 118 Query: 125 VNPDDS 130 D Sbjct: 119 DEADQE 124 >UniRef50_Q7NBZ3 Ribosome-binding factor A n=1 Tax=Mycoplasma gallisepticum RepID=RBFA_MYCGA Length = 121 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K + R+ + K ++ + EI + + + ++ +++S D + AK+Y+ L Sbjct: 3 MSK--IKTLRLEATIHKLLSQAISTEINNSLIKT-SVITAIKLSDDKSVAKIYIDCLIPN 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + ++A ++A+G R +L K + +R +P+L F+YD+S+ +G ++ ++ + + Sbjct: 60 N---IAKTLQAYKDATGVFRHVLSKHLTIRRIPQLVFYYDDSISKGAKIDQILAEIKQEK 116 Query: 121 EERR 124 +E Sbjct: 117 KENH 120 >UniRef50_Q4FNM8 Ribosome-binding factor A n=3 Tax=Candidatus Pelagibacter RepID=RBFA_PELUB Length = 122 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMMT-TVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV + +++ + +I R E K P L T TV+ V+MS+DL AK YV L KD Sbjct: 10 SQRQLRVGEMIRQSLGMIFARNEAKVPNLETNTITVTEVKMSQDLKIAKAYVLPLGGKDS 69 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + V IK L+E S IR L K + ++ +P++ F D+S ++ NL+ K Sbjct: 70 ELV---IKKLKECSFLIRKALSKKIIMKYLPKILFAKDDSFEYAEKIENLIKQTNK 122 >UniRef50_Q01W29 Ribosome-binding factor A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RBFA_SOLUE Length = 123 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV++ +++E++ I+ E+ DPR+ + V+ V +S D +A + + D+ + Sbjct: 4 RRTLRVSEAVREELSEIISFEMDDPRV-LEAEVTEVMVSPDSRHASIKIACRGDEKKQNH 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 I AL+ A+G++R L ++LR VPEL F D + R+ L+ + + R Sbjct: 63 --AIAALEHAAGYLRRELASRLQLRHVPELHFERDKNPDVESRVDFLLRRA-RRTKGREE 119 Query: 126 NPD 128 NP Sbjct: 120 NPS 122 >UniRef50_A6KYQ5 Ribosome-binding factor A n=36 Tax=Bacteria RepID=A6KYQ5_BACV8 Length = 111 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R ++++ +QKE++ I + K G++ +VS V +S D++ A+VY++ + Sbjct: 2 ETTRQNKISRLIQKELSEIFLLQTK-SMNGVLVSVSAVRISPDMSIARVYLSVFPSERSQ 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTS 115 + +K + + IR LG +R LRI+PEL FF D+SL R+ L+ Sbjct: 61 EI---VKNINDNMKSIRYELGTRVRHQLRIIPELKFFVDDSLDYAERIDELLKK 111 >UniRef50_Q3ELJ3 Ribosome-binding factor A n=1 Tax=Bacillus thuringiensis serovar israelensis ATCC 35646 RepID=Q3ELJ3_BACTI Length = 84 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 3/78 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R RV ++M+KE+ I+ R+IKDPR+G +T V+ V++S DL KVY++ L D+++ + Sbjct: 4 RANRVGEQMKKELGDIISRKIKDPRIGFVT-VTDVQVSGDLQIGKVYISGLGDEEQKEI- 61 Query: 67 AGIKALQEASGFIRSLLG 84 K L +A GFIRS +G Sbjct: 62 -TFKGLAKAKGFIRSEIG 78 >UniRef50_B2UQQ2 Ribosome-binding factor A n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=RBFA_AKKM8 Length = 125 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 5/129 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +V + +++EI +QR+ + P G + TV VE++ DL KV+V + Sbjct: 2 SRRTDKVNELLRREIGTTIQRDFEFP--GTIVTVIEVEVTDDLKEGKVWVGVVGKMAPSQ 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 V ++ L G I+S + + + LR P LTF D+S G+ + NL+ + K+ + Sbjct: 60 V---LEKLNSRHGLIQSAVARRVVLRNTPRLTFRLDDSAQRGVDLVNLLEDIDKNLPKAP 116 Query: 125 VNPDDSKED 133 ++ + Sbjct: 117 PADAENDGE 125 >UniRef50_D2R7W9 Ribosome-binding factor A n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7W9_9PLAN Length = 165 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R + + +++ +++ + EI+DPR+ +T V VEM+ D+ AK+ V+ + D+ + Sbjct: 3 SRRILKAQEAIREVVSMAILTEIRDPRVRDVTVV-KVEMTPDMRAAKIMVSVMGDEQRE- 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 K + LQ ++GF++ + + R P+LTF D + + + ++ V+ Sbjct: 61 -KLTVLGLQNSAGFLQKRIADEIDTRYTPKLTFEIDRGVKNSLEVLRILKEVLP 113 >UniRef50_Q14NW2 Putative ribosome-binding factor a protein n=1 Tax=Spiroplasma citri RepID=Q14NW2_SPICI Length = 112 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 5/117 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + +R+ + +++ +I+QREI+D L + ++ V++S DL++AKVY + L +K Sbjct: 1 MANKIK-VERMQSLIARDLTIIMQREIRDEILNTL-SIHAVKLSNDLSHAKVYYSSLLNK 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 E + + Q IRS L + + P+L F +D SL + ++ ++ Sbjct: 59 PEAELHNIV---QNYKNKIRSKLAHKLEIYRCPDLEFIFDRSLDNANNIEAILQNLK 112 >UniRef50_A0M6N1 Ribosome-binding factor A n=13 Tax=Bacteroidetes RepID=RBFA_GRAFK Length = 131 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 10/128 (7%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDP-RLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 E R +++ +QK++A ILQ +++ R G++ +VS V ++ DL+ AK YV+ K + Sbjct: 3 ETNRQKKIGGLLQKDLADILQNSLRESGRTGILISVSKVRVTTDLSIAKAYVSIFPSKHQ 62 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + V IK + E I+ + + R LR +P+L+F+ D+SL + + K Sbjct: 63 EEV---IKEINENKSQIKHEMAQRTRHQLRKMPDLSFYVDDSLEYIDGIEKSI----KGK 115 Query: 121 EERRVNPD 128 E+ NPD Sbjct: 116 EDPVANPD 123 >UniRef50_Q7XYI2 Ribosome-binding factor A (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYI2_BIGNA Length = 198 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 14/134 (10%) Query: 6 GRPQRVAQEMQKEIALILQREIK------------DPRLGMMTTVSGVEMSRDLAYAKVY 53 R RV +E+Q+E+ +L + D R + +V+ V+MSRDL+ AK+Y Sbjct: 65 RRIGRVGREIQREMGDLLVNDRNVLAAIDPKYDDDDIRNMTIASVTEVQMSRDLSVAKLY 124 Query: 54 VTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + F + + + + L G+IR ++ + + LR PEL F+ DN+L E M ++ Sbjct: 125 LMFSGGT-KKSYQPILDRLNAKKGYIRRVVSQRLNLRRSPELVFYEDNTLNEADEMKRIM 183 Query: 114 TSVVKHDEERRVNP 127 V++ D E R Sbjct: 184 A-VLREDREFREKQ 196 >UniRef50_Q6F193 Ribosome-binding factor A n=1 Tax=Mesoplasma florum RepID=Q6F193_MESFL Length = 116 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%) Query: 10 RVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGI 69 R + +E+ +I++RE+K+ L + +++ V ++ D AK+Y +FL E + Sbjct: 9 RKEATILRELTIIIEREMKNDVLRAL-SIAEVRLTNDSEIAKIYWSFLPLNKEITKELIA 67 Query: 70 KALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 L+E IR L + R VP+L F YD SL R+ ++ V K Sbjct: 68 SELEENKKTIRMKLAHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK 116 >UniRef50_A6LN42 Ribosome-binding factor A n=1 Tax=Thermosipho melanesiensis BI429 RepID=RBFA_THEM4 Length = 125 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 70/125 (56%), Gaps = 7/125 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMM---TTVSGVEMSRDLAYAKVYVTFL 57 M E+ R +++ +++ I+ LQ+ IK P + + +S V +S+D +A V+V+++ Sbjct: 1 MNPEY-RNKKIENKIRGLISEGLQK-IKVPEIDALKSYIVISRVLVSKDKRFADVFVSYI 58 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 D D+ K ++ L++ GF R + + +R+ PEL F D + E +R++ L+ + Sbjct: 59 GD--ADSRKRAVELLEKYKGFFRKYIAQNLRIYTTPELRFKEDIGIEESIRINKLLDEIS 116 Query: 118 KHDEE 122 K+++ Sbjct: 117 KNNKN 121 >UniRef50_B3DXW7 Ribosome-binding factor A n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXW7_METI4 Length = 116 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 63/119 (52%), Gaps = 4/119 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV++ +++E++ QRE++ G++ T+S VE + DL A ++V+ + D Sbjct: 2 TSRAIRVSEVIRRELSFCFQREVELE--GLVLTISSVETTADLKEASIFVSLFDASISDE 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 + + L + +GK ++ + P LTF D+SL G ++ ++ + K ++++ Sbjct: 60 L--LLDILNRHRSEWQRWIGKRLQSKFTPRLTFKIDDSLYRGDKVLRIIEELDKENKQK 116 >UniRef50_B1ZX44 Ribosome-binding factor A n=1 Tax=Opitutus terrae PB90-1 RepID=RBFA_OPITP Length = 122 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV + +Q+E++ IL++ + T++ + ++ DL A+V+V+ + +E Sbjct: 2 SNRTLRVNELIQRELSEILRKRYQSE--ATAITITELRVAPDLRDARVFVSIVGSAEEQD 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K ++ L+ +G +R +G+ + L+ +P+ + D+S + R+ ++ + + R Sbjct: 60 EK--LRWLRAHAGELRYEVGRRIVLKYLPKFEYVLDHSPEKSARILQVLDEIDRQTPPRP 117 Query: 125 VNPDD 129 +D Sbjct: 118 EAEND 122 >UniRef50_A7HZ94 Ribosome-binding factor A n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=RBFA_PARL1 Length = 140 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + +++ ++ ++ R I+DP L +V+ V +S DL +A +V L D Sbjct: 17 SQRQLRAGELIRRALSDVVTRGTIQDPDLIERSFSVTEVRVSPDLRHATCFVAPLGKGDA 76 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A+ A + G++R L K + + +P+LTF D S + ++ L+ S Sbjct: 77 AALAAALT---RVRGYLRGQLSKEVTFKYMPDLTFEPDTSFDKAEQIDRLLHS---PKVS 130 Query: 123 RRVNPDDSKE 132 + ++P D +E Sbjct: 131 QDLSPQDDEE 140 >UniRef50_B7IDY7 Ribosome-binding factor A n=1 Tax=Thermosipho africanus TCF52B RepID=RBFA_THEAB Length = 126 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 70/126 (55%), Gaps = 7/126 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPR---LGMMTTVSGVEMSRDLAYAKVYVTFL 57 M E+ R +++ +++ IA +Q+ IK+P L +S V +S+D +A V+V+ + Sbjct: 1 MRPEY-RNKKIEAYIRELIAQAIQK-IKEPEFEYLKDYIVISRVLISKDRRFADVFVSVI 58 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + ++ K ++ L++ G+ R+ + K +RL PEL F D + E +R++ L+ ++ Sbjct: 59 GNSEQR--KKAVELLEKYKGYFRTFVAKNVRLYTAPELRFKEDKGIEESVRINKLLDEIM 116 Query: 118 KHDEER 123 ++E Sbjct: 117 SKEDEN 122 >UniRef50_B1AIV9 Ribosome-binding factor A n=14 Tax=Ureaplasma RepID=RBFA_UREP2 Length = 116 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 5/121 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA E R R+ ++ I L EI D ++ + V+ V +S DL+ AK++ L+ Sbjct: 1 MANEV-RVARLESLIKDVINNALANEIND-KIAKLARVTAVRLSNDLSVAKIF---LDAH 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +++ ++ + + SG +RS L VPEL F D ++ + L + + + Sbjct: 56 KRESMLKVLENVNKVSGLLRSKLAAEWTSYKVPELRFVIDETIDYANHIDELFKKIKQQE 115 Query: 121 E 121 Sbjct: 116 N 116 >UniRef50_C6X0X9 Ribosome-binding factor A n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0X9_FLAB3 Length = 120 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 66/114 (57%), Gaps = 5/114 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 E R ++VAQ +Q+++A + +++ D + + TVS V+++ DL+ AKVY++ Sbjct: 2 NESNRQRKVAQIIQQDLAELFRKQASDSKQNFLVTVSDVKITADLSIAKVYLSIFP---P 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAM--RLRIVPELTFFYDNSLVEGMRMSNLVT 114 A +K +++ + R+ +G+ M ++RI+P++ F+ D +L + ++ + Sbjct: 59 AVRAAVMKEIEQNTSAYRNFIGQKMGKQVRIIPDVKFYLDTTLDDVEKIEKELK 112 >UniRef50_B0VFC2 Putative ribosome-binding factor A (RbfA-like) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFC2_9BACT Length = 161 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 64/111 (57%), Gaps = 3/111 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ E++K + L +++ DP+L + ++ V +S+DL YAK+Y + N+ + Sbjct: 5 RIPRLQAELKKLFNIALSQKLNDPKLAWV-QITDVVISKDLHYAKLYFSHYNN--PASHD 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + L ++SGF++ + A +R +PEL+F+YD++ ++ L+ S+ Sbjct: 62 QIRELLIKSSGFLKKQIAGAQIMRTIPELSFYYDDTEDRAAKVDTLLASLR 112 >UniRef50_Q98PP7 Ribosome-binding factor A n=1 Tax=Mycoplasma pulmonis RepID=RBFA_MYCPU Length = 112 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 63/112 (56%), Gaps = 6/112 (5%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 ++ Q++ I+ I+ E+++ + ++TTV G+++S DL++ VYVTF K Sbjct: 7 EKREQDILINISRIISEEVQNLK-DVLTTVVGIKLSSDLSHCNVYVTF-----SKNSKKN 60 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ++ L +ASG+I+ L ++ R +P L F D++ + +++ ++ + K Sbjct: 61 LERLNQASGYIKKQLSSILKWRKIPSLHFKIDDTFEKSLKIEQILEEIKKEK 112 >UniRef50_Q16CE6 Ribosome-binding factor A n=43 Tax=Rhodobacterales RepID=RBFA_ROSDO Length = 143 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 6/134 (4%) Query: 2 AKEFGRPQRVAQEMQKEIALILQR-EIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLND 59 R RV + +++ ++ +L R ++ D L + TV V S DL A YV L Sbjct: 13 PGPSQRQLRVGETIRRALSDVLARGDVHDTDLNRLSVTVGEVRASPDLKIATAYVLPLGG 72 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV-VK 118 + +D V I L G +R L+ K + L+ P+L F D + ++ VK Sbjct: 73 QGKDEV---IALLARNKGELRRLVAKKLTLKFAPDLRFQLDETFDRMDETREMLNRAEVK 129 Query: 119 HDEERRVNPDDSKE 132 D + E Sbjct: 130 RDTGPVPAGESDTE 143 >UniRef50_A9NF13 Ribosome-binding factor A n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF13_ACHLI Length = 115 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 3/113 (2%) Query: 8 PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 R+A + +E+ I+ IK+ ++G +T ++ ++++D +Y VY T ++D E A K Sbjct: 5 VDRLASRIFRELVHIVNDVIKNTQIGYIT-LTETKVTKDKSYCYVYYTIIDDSVE-AKKK 62 Query: 68 GIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 L IR L + +R +P+L F YD +L G + L++ + K+ Sbjct: 63 VQDLLDAGKKEIRMKLASKVNDIRKIPDLVFKYDEALAYGNHIDKLLSDINKN 115 >UniRef50_C6XFV6 Ribosome-binding factor A n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFV6_LIBAP Length = 128 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 6/115 (5%) Query: 2 AKEFGRPQRVAQEMQKEI-ALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLND 59 K R RV +E++ + +IL E +D + + ++S V MS DL A VY++ D Sbjct: 6 PKNSRRALRVGEEVRSALMWVILNNEFQDRLISRDVISISEVCMSVDLRVATVYISLPLD 65 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLV 113 D V I AL FIR +G+++R LR VPEL F YD SL +++ L+ Sbjct: 66 VSPDRV---ISALNCNIKFIRGRIGRSLRNLRYVPELRFRYDTSLQSYWKLNALM 117 >UniRef50_A5IZH0 Ribosome-binding factor A n=1 Tax=Mycoplasma agalactiae PG2 RepID=RBFA_MYCAP Length = 113 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 7/120 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K R +++ I+ I+ E+ + + TV+ V +S DL + KV++ F + + Sbjct: 1 MKKSIS-VLRKESQIKNFISTIITNELTNANI-YNPTVTDVVLSTDLGHVKVFLAFSSKE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ++ G+ A++ ASG+IR L K + R VPEL F+ D + + ++ S+ + Sbjct: 59 ND-----GLDAVKNASGYIRKRLSKTLNWRKVPELHFYIDEVEKKAFEIDQILNSLKNEE 113 >UniRef50_C1F438 Ribosome-binding factor A n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F438_ACIC5 Length = 123 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 6/122 (4%) Query: 1 MAKEFGR---PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL 57 M ++ R RVA+ +++EI +L+ E+ DPR+ VS V ++ A+V+V Sbjct: 1 MPEQRARKYHQDRVAETLREEIGAMLEGELSDPRIS-FAHVSQVILNPGGKSAQVWVAV- 58 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 D +A + ++ L A G+IR L + R VPELTF D S R+ L+ Sbjct: 59 -DGGNEAEEQTVQGLMAARGYIRHELLERTGKRRVPELTFHVDRSDRMKARIDELLGRSQ 117 Query: 118 KH 119 K Sbjct: 118 KK 119 >UniRef50_C5JAM5 Ribosome-binding factor A n=1 Tax=uncultured bacterium RepID=C5JAM5_9BACT Length = 143 Score = 95.9 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 11/125 (8%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPR--------LGMMTTVSGVEMSRDLAYAKVY 53 K R R+ QE+Q+ ++ ++ R++ P + T++ ++S D+ AK+Y Sbjct: 12 PKSANRQLRLCQEVQRFVSELITRKVLPPVDIDGVMVTADPLMTIARADVSPDMKTAKIY 71 Query: 54 VTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 V +D + A +K L+ +R + K + +R PEL+F D + + RM L Sbjct: 72 VRHFDDN---QLPASLKYLEAVKSVMRHAMAKQLNMRFTPELSFHVDALVEKERRMDELF 128 Query: 114 TSVVK 118 + + Sbjct: 129 SKTAR 133 >UniRef50_Q2G5E9 Ribosome-binding factor A n=6 Tax=Sphingomonadales RepID=RBFA_NOVAD Length = 135 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%) Query: 1 MAKE-------FGRPQRVAQEMQKEIALILQR-EIKDPRLGMMT-TVSGVEMSRDLAYAK 51 MAK+ R +V ++++ ++ +L R E+ D L T +V+ V MS DL +A Sbjct: 1 MAKQQTSPETRSVRLLKVGEQVRHILSELLARQEVHDDVLSAHTVSVTEVRMSPDLRHAT 60 Query: 52 VYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSN 111 V++ L +DED V +KAL+ + F + + + +RL+ L F D S ++ Sbjct: 61 VFIKALLGEDEDLV---LKALRTNTAFFQREVAQRLRLKYAARLKFLADESFDVASKIET 117 Query: 112 LVTSVVKHDEERRVNPD 128 L+ + R D Sbjct: 118 LLADPKVQRDLRDQESD 134 >UniRef50_B5JHK1 Ribosome-binding factor A n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHK1_9BACT Length = 130 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 3/129 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV + +++EI+ IL K ++ T++GV++S D A ++ + + + E Sbjct: 2 SNRKIRVGELVRREISDILHTRFK--SAAVLITITGVDVSPDNQNALIFYSVI-ETKEYK 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + ++ R LGK + L+ +P LTF +D R++ L+ + + + Sbjct: 59 RRDAQRFFEKNKSMFRRELGKRIILKYLPALTFAFDEKNEAATRVNELIDELDIPEGDVS 118 Query: 125 VNPDDSKED 133 + D D Sbjct: 119 TSEDTENRD 127 >UniRef50_Q5PAJ6 Ribosome-binding factor A n=4 Tax=Anaplasma RepID=RBFA_ANAMM Length = 117 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 4/108 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +VA +++ +A + RE D L M ++SGV++S D A V+V DK D Sbjct: 11 RSLKVASVLKRALAQLFIREFYD--LSSMLSISGVKVSEDTRNATVFVAI-GDKSVDG-D 66 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT 114 + AL +AS IR + + ++LR VP L F D +R+S ++ Sbjct: 67 EVVAALNDASNSIRRAVFRYLKLRYVPRLHFKLDVEFDNFLRISEIMA 114 >UniRef50_D1N2Z1 Ribosome-binding factor A n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2Z1_9BACT Length = 121 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQRE-IKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 MA++ R RV + +++EIA ++R I P GM+ +V+ V S DL A VYV+ Sbjct: 1 MAEKVDRLTRVNELLKREIANAIERGLITAP--GMLVSVTEVNTSVDLRNATVYVSIFGG 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D A + + L E + L + + + P L F D + +G R+ L+ V H Sbjct: 59 -DNAARRKVMNELGEQRLDFQRKLARTLAFKHTPVLDFRLDTRIEKGDRVFELLNEVENH 117 Query: 120 DEER 123 ++ Sbjct: 118 NKHE 121 >UniRef50_A1KMI1 Ribosome-binding factor A n=26 Tax=Actinomycetales RepID=RBFA_MYCBP Length = 183 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%) Query: 18 EIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK--DEDAVKAGIKALQEA 75 +A ++ EIKDP L +T ++ +++ DL A VY T + DE AL+ A Sbjct: 17 IVASAIEYEIKDPGLAGVT-ITDAKVTADLHDATVYYTVMGRTLHDEPNCAGAAAALERA 75 Query: 76 SGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSN 111 G +R+ +G +R P LTF D RM Sbjct: 76 KGVLRTKVGAGTGVRFTPTLTFTLDTISDSVHRMDE 111 >UniRef50_A9BI93 Ribosome-binding factor A n=1 Tax=Petrotoga mobilis SJ95 RepID=RBFA_PETMO Length = 117 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 6/118 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R + + EM+K I ++KDPRL ++ V +S+D +Y VYV+ L+ + + Sbjct: 5 RREMLESEMKKLITQGFS-QLKDPRLKDKFIDINMVRLSKDKSYLDVYVSSLD----EDI 59 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 I L A G R+L+ K +++ VPE+ F D + +R++ L+ + K++E + Sbjct: 60 DTIINILNNAKGMFRTLIAKNIKMFKVPEVRFHKDEGIEASIRINKLIEKIEKNEEGK 117 >UniRef50_C7PES0 Ribosome-binding factor A n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PES0_CHIPD Length = 124 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 5/120 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +E R +++ Q +QKE++ I QR + G M ++S V+++ DL A+VY++ D Sbjct: 2 QESKRQKQIGQLLQKELSEIFQRMGFNVVDGGMISISSVKLTPDLLEARVYLSMFKIADS 61 Query: 63 DAVKAGIKALQEASGFIRSLLGKAM--RLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + IK E G I+ LG + +LR VPE++ F D++L +M L + + D Sbjct: 62 HEMVNRIK---ERMGEIKKDLGNRVGKQLRRVPEISLFLDDTLEYIFKMEELFKKIKEDD 118 >UniRef50_B0T172 Ribosome-binding factor A n=7 Tax=Caulobacteraceae RepID=RBFA_CAUSK Length = 164 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 19/148 (12%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + ++ + IL+ E + DP L + T+S V MS DL +A +V L Sbjct: 16 SQRQLRAGELIRHALVDILREEDLVDPALAGISVTISEVRMSADLKHAICFVEPLGASIA 75 Query: 63 DAVK-----------------AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 V+ + L + F+R L K + ++ PEL F +D + Sbjct: 76 PQVEREPSSPSRTVVVPGSPAEVVAGLTRLTKFLRGKLAKTIDMKFTPELKFLHDETFNS 135 Query: 106 GMRMSNLVTSVVKHDEERRVNPDDSKED 133 M L + RR++ E+ Sbjct: 136 ATYMDRLFEDPRVQQDVRRLSDVAEDEE 163 >UniRef50_A3VQI0 Ribosome-binding factor A n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQI0_9PROT Length = 106 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Query: 15 MQKEIALILQREIKDPRLGMMT--TVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKAL 72 ++ +A + QRE T T++ V +S DL A V+ + L +D + L Sbjct: 2 IRHALAEMFQREEIHEEAFPTTPVTITEVRVSPDLKSATVFCSALG---KDVFDEEVAQL 58 Query: 73 QEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 SG IR +LG+ + ++ P L F D + E R++ L+ + D Sbjct: 59 NAISGAIRQVLGRKITMKYTPSLKFLPDETFEEAARINALLKETRRVD 106 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7V1F5 Ribosome-binding factor A n=6 Tax=Gammaproteobac... 153 2e-36 UniRef50_Q48E78 Ribosome-binding factor A n=11 Tax=Gammaproteoba... 151 7e-36 UniRef50_Q3KI83 Ribosome-binding factor A n=14 Tax=Proteobacteri... 150 1e-35 UniRef50_Q1GXD5 Ribosome-binding factor A n=3 Tax=Betaproteobact... 150 2e-35 UniRef50_Q65SL1 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 147 1e-34 UniRef50_Q5NZS0 Ribosome-binding factor A n=1 Tax=Aromatoleum ar... 145 4e-34 UniRef50_A9KNW3 Ribosome-binding factor A n=23 Tax=Bacteria RepI... 145 4e-34 UniRef50_Q18BH6 Ribosome-binding factor A n=6 Tax=Clostridium Re... 145 5e-34 UniRef50_Q3IJ52 Ribosome-binding factor A n=221 Tax=Gammaproteob... 144 7e-34 UniRef50_B5JRR1 Ribosome-binding factor A n=1 Tax=gamma proteoba... 144 1e-33 UniRef50_Q482T8 Ribosome-binding factor A n=2 Tax=Alteromonadale... 144 1e-33 UniRef50_Q0A798 Ribosome-binding factor A n=3 Tax=Ectothiorhodos... 143 1e-33 UniRef50_Q5X1C4 Ribosome-binding factor A n=6 Tax=Legionella Rep... 142 4e-33 UniRef50_A4IMD9 Ribosome-binding factor A n=50 Tax=Firmicutes Re... 141 8e-33 UniRef50_C4Z5N8 Ribosome-binding factor A n=10 Tax=Firmicutes Re... 140 2e-32 UniRef50_A4BAM6 Ribosome-binding factor A n=2 Tax=Gammaproteobac... 139 2e-32 UniRef50_B2A398 Ribosome-binding factor A n=9 Tax=Firmicutes Rep... 138 4e-32 UniRef50_B9KZ59 Ribosome-binding factor A n=1 Tax=Thermomicrobiu... 138 6e-32 UniRef50_B8JFY8 Ribosome-binding factor A n=4 Tax=Anaeromyxobact... 138 6e-32 UniRef50_Q3J9B7 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 137 1e-31 UniRef50_C2KV11 Ribosome-binding factor A n=1 Tax=Oribacterium s... 137 1e-31 UniRef50_Q1K0G2 Ribosome-binding factor A n=1 Tax=Desulfuromonas... 136 2e-31 UniRef50_C7RU80 Ribosome-binding factor A n=1 Tax=Candidatus Acc... 136 2e-31 UniRef50_A6T0Y7 Ribosome-binding factor A n=3 Tax=Betaproteobact... 136 3e-31 UniRef50_C7R7H8 Ribosome-binding factor A n=1 Tax=Kangiella kore... 135 3e-31 UniRef50_C5BPV8 Ribosome-binding factor A n=9 Tax=Proteobacteria... 135 4e-31 UniRef50_A0LE17 Ribosome-binding factor A n=1 Tax=Magnetococcus ... 135 6e-31 UniRef50_A1U5Z9 Ribosome-binding factor A n=7 Tax=Gammaproteobac... 135 6e-31 UniRef50_C5RLI4 Ribosome-binding factor A n=2 Tax=Clostridium Re... 135 6e-31 UniRef50_Q21H62 Ribosome-binding factor A n=1 Tax=Saccharophagus... 134 7e-31 UniRef50_Q057K0 Ribosome-binding factor A n=1 Tax=Buchnera aphid... 134 7e-31 UniRef50_D0L0S5 Ribosome-binding factor A n=1 Tax=Halothiobacill... 134 1e-30 UniRef50_Q74CT2 Ribosome-binding factor A n=1 Tax=Geobacter sulf... 133 1e-30 UniRef50_B1I386 Ribosome-binding factor A n=1 Tax=Candidatus Des... 133 1e-30 UniRef50_B8FCY7 Ribosome-binding factor A n=1 Tax=Desulfatibacil... 133 2e-30 UniRef50_B8D9G1 Ribosome-binding factor A n=4 Tax=Buchnera aphid... 133 2e-30 UniRef50_B9M1G1 Ribosome-binding factor A n=8 Tax=Desulfuromonad... 133 2e-30 UniRef50_A4XL69 Ribosome-binding factor A n=15 Tax=Firmicutes Re... 133 2e-30 UniRef50_A4J5X1 Ribosome-binding factor A n=1 Tax=Desulfotomacul... 133 2e-30 UniRef50_Q2RJM4 Ribosome-binding factor A n=5 Tax=Bacteria RepID... 132 3e-30 UniRef50_C0WBC7 Ribosome-binding factor A n=1 Tax=Acidaminococcu... 132 3e-30 UniRef50_B3PI97 Ribosome-binding factor A n=1 Tax=Cellvibrio jap... 132 3e-30 UniRef50_B0CDK8 Ribosome-binding factor A n=10 Tax=Cyanobacteria... 132 3e-30 UniRef50_A5WBS6 Ribosome-binding factor A n=19 Tax=Moraxellaceae... 132 4e-30 UniRef50_B2GBN8 Ribosome-binding factor A n=86 Tax=Lactobacillal... 132 5e-30 UniRef50_Q1YSY1 Ribosome-binding factor A n=1 Tax=gamma proteoba... 131 7e-30 UniRef50_Q2LWT9 Ribosome-binding factor A n=2 Tax=Syntrophobacte... 131 8e-30 UniRef50_C0QHM3 Ribosome-binding factor A n=1 Tax=Desulfobacteri... 130 9e-30 UniRef50_Q2JW85 Ribosome-binding factor A n=18 Tax=Cyanobacteria... 130 9e-30 UniRef50_A2CCY5 Ribosome-binding factor A n=23 Tax=cellular orga... 130 1e-29 UniRef50_B5YEH6 Ribosome-binding factor A n=2 Tax=Dictyoglomus R... 130 2e-29 UniRef50_A1HSB5 Ribosome-binding factor A n=1 Tax=Thermosinus ca... 129 2e-29 UniRef50_C2BHN3 Ribosome-binding factor A n=3 Tax=Anaerococcus R... 129 2e-29 UniRef50_C9RKT5 Ribosome-binding factor A n=1 Tax=Fibrobacter su... 129 3e-29 UniRef50_Q044B6 Ribosome-binding factor A n=58 Tax=Lactobacillal... 129 4e-29 UniRef50_C1A8N9 Ribosome-binding factor A n=1 Tax=Gemmatimonas a... 128 5e-29 UniRef50_Q1MZS3 Ribosome-binding factor A n=1 Tax=Bermanella mar... 128 5e-29 UniRef50_Q0VSS0 Ribosome-binding factor A n=3 Tax=Gammaproteobac... 128 5e-29 UniRef50_A7BQM5 Ribosome-binding factor A n=1 Tax=Beggiatoa sp. ... 128 5e-29 UniRef50_C7H128 MgpA protein n=1 Tax=Eubacterium saphenum ATCC 4... 128 6e-29 UniRef50_C8W4P3 Ribosome-binding factor A n=3 Tax=Clostridia Rep... 128 6e-29 UniRef50_A9AV50 Ribosome-binding factor A n=1 Tax=Herpetosiphon ... 127 8e-29 UniRef50_A7X1Q2 Ribosome-binding factor A n=133 Tax=Bacillales R... 127 8e-29 UniRef50_C7RGP1 Ribosome-binding factor A n=2 Tax=Anaerococcus R... 127 9e-29 UniRef50_D1BM61 Ribosome-binding factor A n=8 Tax=Veillonellacea... 127 9e-29 UniRef50_D1R4P7 Putative uncharacterized protein n=1 Tax=Parachl... 127 1e-28 UniRef50_Q31GK4 Ribosome-binding factor A n=1 Tax=Thiomicrospira... 127 1e-28 UniRef50_Q6MD65 Ribosome-binding factor A n=1 Tax=Candidatus Pro... 127 2e-28 UniRef50_Q04GM9 Ribosome-binding factor A n=2 Tax=Oenococcus oen... 127 2e-28 UniRef50_Q3AB99 Ribosome-binding factor A n=1 Tax=Carboxydotherm... 126 2e-28 UniRef50_A1KUJ5 Ribosome-binding factor A n=28 Tax=Neisseriaceae... 126 2e-28 UniRef50_Q8DVP8 Ribosome-binding factor A n=5 Tax=Lactobacillale... 126 3e-28 UniRef50_C8NBH2 Ribosome-binding factor A n=1 Tax=Cardiobacteriu... 125 3e-28 UniRef50_B4RC51 Ribosome-binding factor A n=2 Tax=Alphaproteobac... 125 3e-28 UniRef50_D1VSB2 Ribosome-binding factor A n=1 Tax=Peptoniphilus ... 125 4e-28 UniRef50_C7JG37 Ribosome-binding factor A n=8 Tax=Acetobacter pa... 125 5e-28 UniRef50_B1IA81 Ribosome-binding factor A n=30 Tax=Streptococcus... 125 6e-28 UniRef50_D1CFX0 Ribosome-binding factor A n=1 Tax=Thermobaculum ... 124 7e-28 UniRef50_UPI0001C31DB9 ribosome-binding factor A n=1 Tax=Conexib... 124 8e-28 UniRef50_UPI000196CD5A hypothetical protein CATMIT_02506 n=1 Tax... 124 8e-28 UniRef50_Q1LSK9 Ribosome-binding factor A n=1 Tax=Baumannia cica... 124 8e-28 UniRef50_A1A0A3 Ribosome-binding factor A n=6 Tax=Bifidobacteriu... 124 9e-28 UniRef50_D1C376 Ribosome-binding factor A n=1 Tax=Sphaerobacter ... 124 9e-28 UniRef50_B6J6B2 Ribosome-binding factor A n=6 Tax=Coxiella burne... 124 1e-27 UniRef50_B9E1K3 Ribosome-binding factor A n=35 Tax=Clostridium R... 124 1e-27 UniRef50_A6TRK6 Ribosome-binding factor A n=2 Tax=Alkaliphilus R... 124 1e-27 UniRef50_A5FQR5 Ribosome-binding factor A n=5 Tax=Dehalococcoide... 124 1e-27 UniRef50_B7GNA2 Ribosome-binding factor A n=10 Tax=Bifidobacteri... 124 1e-27 UniRef50_UPI0000E87C6E ribosome-binding factor A n=1 Tax=Methylo... 123 1e-27 UniRef50_B4E7L2 Ribosome-binding factor A n=21 Tax=Burkholderial... 123 1e-27 UniRef50_UPI0000E0F5A5 ribosome-binding factor A n=1 Tax=Glaciec... 123 1e-27 UniRef50_A6NTY2 Putative uncharacterized protein n=1 Tax=Bactero... 123 1e-27 UniRef50_B0S1E4 Ribosome-binding factor A n=2 Tax=Finegoldia mag... 123 1e-27 UniRef50_O65693 Probable ribosome-binding factor A, chloroplasti... 123 2e-27 UniRef50_D2MPT2 Ribosome-binding factor A n=7 Tax=Bacteria RepID... 123 2e-27 UniRef50_A3MJW5 Ribosome-binding factor A n=41 Tax=Burkholderial... 122 3e-27 UniRef50_Q609C1 Ribosome-binding factor A n=1 Tax=Methylococcus ... 122 3e-27 UniRef50_A5UZQ3 Ribosome-binding factor A n=5 Tax=Chloroflexacea... 122 4e-27 UniRef50_Q8D2X7 Ribosome-binding factor A n=1 Tax=Wigglesworthia... 122 4e-27 UniRef50_B6IVF9 Ribosome-binding factor A n=1 Tax=Rhodospirillum... 122 4e-27 UniRef50_Q3BRP6 Ribosome-binding factor A n=19 Tax=Xanthomonadac... 122 5e-27 UniRef50_D2UCR3 Probable ribosome-binding factor a protein n=1 T... 122 5e-27 UniRef50_C1EAK4 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 122 5e-27 UniRef50_Q1Q1G7 Similar to ribosome-binding factor A n=1 Tax=Can... 121 5e-27 UniRef50_C5S648 Ribosome-binding factor A n=1 Tax=Allochromatium... 121 6e-27 UniRef50_B5YHT9 Ribosome-binding factor A n=1 Tax=Thermodesulfov... 121 6e-27 UniRef50_Q1DAM4 Ribosome-binding factor A n=3 Tax=Cystobacterine... 121 7e-27 UniRef50_A5EWY8 Ribosome-binding factor A n=1 Tax=Dichelobacter ... 120 1e-26 UniRef50_A8ZZ63 Ribosome-binding factor A n=1 Tax=Desulfococcus ... 120 1e-26 UniRef50_C4FWY3 Putative uncharacterized protein n=1 Tax=Catonel... 120 2e-26 UniRef50_Q0AK66 Ribosome-binding factor A n=2 Tax=Hyphomonadacea... 119 2e-26 UniRef50_Q0RDS6 Ribosome-binding factor A n=44 Tax=Actinomycetal... 118 4e-26 UniRef50_C8NZL4 Ribosome-binding factor A n=1 Tax=Erysipelothrix... 118 5e-26 UniRef50_C7H6A6 Ribosome-binding factor A n=3 Tax=Ruminococcacea... 118 5e-26 UniRef50_Q46HR0 Ribosome-binding factor A n=2 Tax=Prochlorococcu... 118 6e-26 UniRef50_P59411 Ribosome-binding factor A n=1 Tax=Buchnera aphid... 117 1e-25 UniRef50_C5NYH6 Ribosome-binding factor A n=1 Tax=Gemella haemol... 117 1e-25 UniRef50_A0Q8F2 Ribosome-binding factor A n=18 Tax=Francisella R... 117 1e-25 UniRef50_A3UIH6 Ribosome-binding factor A n=1 Tax=Oceanicaulis a... 117 1e-25 UniRef50_D0MI92 Ribosome-binding factor A n=1 Tax=Rhodothermus m... 117 1e-25 UniRef50_A6W7Z4 Ribosome-binding factor A n=14 Tax=Actinobacteri... 117 2e-25 UniRef50_A5ZAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 117 2e-25 UniRef50_A0NUK1 Ribosome-binding factor A n=3 Tax=Rhodobacterace... 117 2e-25 UniRef50_B8EIA6 Ribosome-binding factor A n=7 Tax=Rhizobiales Re... 117 2e-25 UniRef50_Q0AYI7 Ribosome-binding factor A n=1 Tax=Syntrophomonas... 116 2e-25 UniRef50_C6W5Y8 Ribosome-binding factor A n=1 Tax=Dyadobacter fe... 116 2e-25 UniRef50_B0TQA1 Ribosome-binding factor A n=43 Tax=Gammaproteoba... 116 2e-25 UniRef50_Q2J730 Ribosome-binding factor A n=14 Tax=Actinomycetal... 116 3e-25 UniRef50_A1TSK2 Ribosome-binding factor A n=15 Tax=Burkholderial... 115 4e-25 UniRef50_A3D7K5 Ribosome-binding factor A n=20 Tax=Gammaproteoba... 115 4e-25 UniRef50_D1Y7J4 Ribosome-binding factor A n=1 Tax=Pyramidobacter... 115 4e-25 UniRef50_C9M6R1 Ribosome-binding factor A n=1 Tax=Jonquetella an... 115 5e-25 UniRef50_A6GK84 Ribosome-binding factor A n=1 Tax=Plesiocystis p... 115 5e-25 UniRef50_D2QJ35 Ribosome-binding factor A n=2 Tax=Flexibacterace... 115 5e-25 UniRef50_A7IC07 Ribosome-binding factor A n=35 Tax=Rhizobiales R... 115 6e-25 UniRef50_Q7URR1 Ribosome-binding factor A n=2 Tax=Planctomycetac... 115 6e-25 UniRef50_Q6AJY5 Ribosome-binding factor A n=1 Tax=Desulfotalea p... 114 8e-25 UniRef50_B8DW44 Ribosome-binding factor A n=4 Tax=Bifidobacteriu... 113 1e-24 UniRef50_UPI00016C38FF probable ribosome-binding factor A n=1 Ta... 113 1e-24 UniRef50_Q6MMS5 Ribosome-binding factor A n=1 Tax=Bdellovibrio b... 113 1e-24 UniRef50_D1BAC0 Ribosome-binding factor A n=1 Tax=Thermanaerovib... 113 1e-24 UniRef50_Q5NQ28 Ribosome-binding factor A n=3 Tax=Zymomonas mobi... 113 1e-24 UniRef50_C6XX51 Ribosome-binding factor A n=4 Tax=Sphingobacteri... 113 2e-24 UniRef50_A5FV22 Ribosome-binding factor A n=4 Tax=Acetobacterace... 113 2e-24 UniRef50_A4QEZ1 Ribosome-binding factor A n=8 Tax=Actinomycetale... 112 3e-24 UniRef50_A8TZ00 Ribosome-binding factor A n=1 Tax=alpha proteoba... 112 3e-24 UniRef50_C8WI33 Ribosome-binding factor A n=3 Tax=Coriobacteriac... 112 3e-24 UniRef50_B3QUN3 Ribosome-binding factor A n=1 Tax=Chloroherpeton... 112 4e-24 UniRef50_D0WDY7 Ribosome-binding factor A n=1 Tax=Slackia exigua... 112 4e-24 UniRef50_C0EAK4 Putative uncharacterized protein n=2 Tax=Clostri... 112 5e-24 UniRef50_B9XFC2 Ribosome-binding factor A n=1 Tax=bacterium Elli... 112 5e-24 UniRef50_B6BVJ9 Ribosome-binding factor A n=1 Tax=beta proteobac... 112 5e-24 UniRef50_B0MY67 Putative uncharacterized protein n=1 Tax=Alistip... 111 6e-24 UniRef50_D0WR20 Ribosome-binding factor A n=1 Tax=Actinomyces sp... 111 7e-24 UniRef50_B2S9F7 Ribosome-binding factor A n=38 Tax=Rhizobiales R... 111 7e-24 UniRef50_B8ZRT3 Ribosome-binding factor A n=7 Tax=Actinomycetale... 111 8e-24 UniRef50_B9KAB3 Ribosome-binding factor A n=1 Tax=Thermotoga nea... 111 8e-24 UniRef50_C6HXK3 Ribosome-binding factor A n=1 Tax=Leptospirillum... 111 8e-24 UniRef50_A3HU14 Ribosome-binding factor A n=1 Tax=Algoriphagus s... 111 8e-24 UniRef50_B5Y926 Ribosome-binding factor A n=1 Tax=Coprothermobac... 110 9e-24 UniRef50_B2S4C7 Ribosome-binding factor A n=4 Tax=Treponema RepI... 110 1e-23 UniRef50_A8SMZ5 Putative uncharacterized protein n=1 Tax=Parvimo... 110 1e-23 UniRef50_A8PNL0 Ribosome-binding factor A n=1 Tax=Rickettsiella ... 110 1e-23 UniRef50_Q493T6 Ribosome-binding factor A n=2 Tax=Candidatus Blo... 110 1e-23 UniRef50_Q2RMR9 Ribosome-binding factor A n=4 Tax=Rhodospirillac... 110 2e-23 UniRef50_B3QZW6 Ribosome-binding factor A n=4 Tax=Candidatus Phy... 109 2e-23 UniRef50_Q1AW53 Ribosome-binding factor A n=1 Tax=Rubrobacter xy... 109 2e-23 UniRef50_C1TMK9 Ribosome-binding factor A n=1 Tax=Dethiosulfovib... 109 2e-23 UniRef50_B1LCH6 Ribosome-binding factor A n=8 Tax=Thermotogaceae... 109 2e-23 UniRef50_B2S1E6 Ribosome-binding factor A n=2 Tax=Borrelia RepID... 109 3e-23 UniRef50_A5CXX7 Ribosome-binding factor A n=4 Tax=Bacteria RepID... 109 3e-23 UniRef50_Q7NBZ3 Ribosome-binding factor A n=1 Tax=Mycoplasma gal... 108 4e-23 UniRef50_B9JYK7 Ribosome-binding factor A n=12 Tax=Rhizobiales R... 108 4e-23 UniRef50_B1CB53 Putative uncharacterized protein n=1 Tax=Anaerof... 108 4e-23 UniRef50_C0VVG3 Ribosome-binding factor A n=2 Tax=Corynebacteriu... 108 5e-23 UniRef50_A4X4N9 Ribosome-binding factor A n=4 Tax=Actinomycetale... 108 7e-23 UniRef50_UPI0001745B62 ribosome-binding factor A n=1 Tax=Verruco... 108 8e-23 UniRef50_Q7V3G3 Ribosome-binding factor A n=7 Tax=Prochlorococcu... 107 8e-23 UniRef50_B4CYQ3 Ribosome-binding factor A n=1 Tax=Chthoniobacter... 107 8e-23 UniRef50_D2MK31 Ribosome-binding factor A n=1 Tax=Candidatus Por... 107 8e-23 UniRef50_Q8RHJ7 Ribosome-binding factor A n=14 Tax=Fusobacterium... 107 9e-23 UniRef50_Q16CE6 Ribosome-binding factor A n=43 Tax=Rhodobacteral... 107 9e-23 UniRef50_B0B9K3 Ribosome-binding factor A n=13 Tax=Chlamydiaceae... 107 9e-23 UniRef50_A9ITX2 Ribosome-binding factor A n=5 Tax=Bordetella Rep... 107 9e-23 UniRef50_A4E6U6 Putative uncharacterized protein n=1 Tax=Collins... 107 1e-22 UniRef50_B1GZN7 Ribosome-binding factor A n=1 Tax=uncultured Ter... 107 1e-22 UniRef50_A7HZ94 Ribosome-binding factor A n=1 Tax=Parvibaculum l... 107 1e-22 UniRef50_C8QYE1 Ribosome-binding factor A n=1 Tax=Desulfurivibri... 107 1e-22 UniRef50_B1ZX44 Ribosome-binding factor A n=1 Tax=Opitutus terra... 107 1e-22 UniRef50_B0MQX5 Putative uncharacterized protein n=1 Tax=Eubacte... 107 2e-22 UniRef50_A4S0F7 Predicted protein (Fragment) n=3 Tax=Mamiellales... 106 2e-22 UniRef50_C8W718 Ribosome-binding factor A n=5 Tax=Coriobacteriac... 106 2e-22 UniRef50_C2BRN5 Ribosome-binding factor A n=3 Tax=Mobiluncus Rep... 106 2e-22 UniRef50_Q3AQK8 Ribosome-binding factor A n=11 Tax=Chlorobiaceae... 106 3e-22 UniRef50_A9G882 Ribosome-binding factor A n=1 Tax=Sorangium cell... 106 3e-22 UniRef50_B0T172 Ribosome-binding factor A n=7 Tax=Caulobacterace... 105 4e-22 UniRef50_C9LIQ3 Ribosome-binding factor A n=7 Tax=Prevotella Rep... 105 4e-22 UniRef50_A9WPV9 Ribosome-binding factor A n=4 Tax=Actinomycetale... 105 5e-22 UniRef50_B5RMZ6 Ribosome-binding factor A n=2 Tax=Borrelia RepID... 105 5e-22 UniRef50_D0LZ88 Ribosome-binding factor A n=1 Tax=Haliangium och... 105 6e-22 UniRef50_UPI00016C0EBD ribosome-binding factor A n=1 Tax=Epulopi... 104 8e-22 UniRef50_Q0SM49 Ribosome-binding factor A n=18 Tax=Borrelia burg... 104 9e-22 UniRef50_Q14NW2 Putative ribosome-binding factor a protein n=1 T... 104 9e-22 UniRef50_C8X0G5 Ribosome-binding factor A n=3 Tax=Desulfovibrion... 104 1e-21 UniRef50_B0PH14 Putative uncharacterized protein n=2 Tax=Clostri... 103 1e-21 UniRef50_A6CF42 Probable ribosome-binding factor A n=1 Tax=Planc... 103 1e-21 UniRef50_C4XE44 Putative uncharacterized protein n=1 Tax=Mycopla... 103 1e-21 UniRef50_A6DGZ4 Ribosome-binding factor A n=1 Tax=Lentisphaera a... 103 1e-21 UniRef50_Q1IIT5 Ribosome-binding factor A n=1 Tax=Candidatus Kor... 103 1e-21 UniRef50_C1SPK3 Ribosome-binding factor A n=1 Tax=Denitrovibrio ... 103 1e-21 UniRef50_Q11P01 Ribosome-binding factor A n=1 Tax=Cytophaga hutc... 103 2e-21 UniRef50_Q2G5E9 Ribosome-binding factor A n=6 Tax=Sphingomonadal... 103 2e-21 UniRef50_Q01W29 Ribosome-binding factor A n=1 Tax=Candidatus Sol... 103 2e-21 UniRef50_C0GUB2 Ribosome-binding factor A n=1 Tax=Desulfonatrono... 102 3e-21 UniRef50_B1AIV9 Ribosome-binding factor A n=14 Tax=Ureaplasma Re... 102 3e-21 UniRef50_B5JHK1 Ribosome-binding factor A n=1 Tax=Verrucomicrobi... 102 3e-21 UniRef50_A6KYQ5 Ribosome-binding factor A n=36 Tax=Bacteria RepI... 102 4e-21 UniRef50_Q83ND3 Ribosome-binding factor A n=2 Tax=Tropheryma whi... 102 4e-21 UniRef50_C6X0X9 Ribosome-binding factor A n=1 Tax=Flavobacteriac... 102 5e-21 UniRef50_Q6F193 Ribosome-binding factor A n=1 Tax=Mesoplasma flo... 102 5e-21 UniRef50_Q7XYI2 Ribosome-binding factor A (Fragment) n=1 Tax=Big... 102 5e-21 UniRef50_B0SH19 Ribosome-binding factor A n=2 Tax=Leptospira bif... 102 5e-21 UniRef50_Q4FNM8 Ribosome-binding factor A n=3 Tax=Candidatus Pel... 101 6e-21 UniRef50_B2UQQ2 Ribosome-binding factor A n=1 Tax=Akkermansia mu... 100 1e-20 UniRef50_D1AY63 Ribosome-binding factor A n=5 Tax=Fusobacteriace... 100 1e-20 UniRef50_B7IDY7 Ribosome-binding factor A n=1 Tax=Thermosipho af... 100 1e-20 UniRef50_B5W1W9 Ribosome-binding factor A n=1 Tax=Arthrospira ma... 100 2e-20 UniRef50_C1ZB80 Ribosome-binding factor A n=1 Tax=Planctomyces l... 100 2e-20 UniRef50_A8J0V0 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 100 2e-20 UniRef50_A0M6N1 Ribosome-binding factor A n=13 Tax=Bacteroidetes... 100 2e-20 UniRef50_Q2S1N8 Ribosome-binding factor A n=1 Tax=Salinibacter r... 100 3e-20 UniRef50_B0VFC2 Putative ribosome-binding factor A (RbfA-like) n... 99 3e-20 UniRef50_D2R7W9 Ribosome-binding factor A n=1 Tax=Pirellula stal... 99 3e-20 UniRef50_C1F438 Ribosome-binding factor A n=1 Tax=Acidobacterium... 99 5e-20 UniRef50_A3VQI0 Ribosome-binding factor A n=1 Tax=Parvularcula b... 99 5e-20 UniRef50_D1N2Z1 Ribosome-binding factor A n=1 Tax=Victivallis va... 99 6e-20 UniRef50_A5IZH0 Ribosome-binding factor A n=1 Tax=Mycoplasma aga... 98 7e-20 UniRef50_Q98PP7 Ribosome-binding factor A n=1 Tax=Mycoplasma pul... 98 9e-20 UniRef50_A6LN42 Ribosome-binding factor A n=1 Tax=Thermosipho me... 98 9e-20 UniRef50_A8EYY5 Ribosome-binding factor A n=15 Tax=Rickettsia Re... 98 1e-19 UniRef50_C6C0D1 Ribosome-binding factor A n=2 Tax=Desulfovibrio ... 98 1e-19 UniRef50_Q8SXX0 CG15916 n=3 Tax=melanogaster subgroup RepID=Q8SX... 98 1e-19 UniRef50_B4JNV4 GH24894 n=4 Tax=Drosophila RepID=B4JNV4_DROGR 97 1e-19 UniRef50_Q8EWT9 Ribosome-binding factor A n=1 Tax=Mycoplasma pen... 97 2e-19 UniRef50_Q5PAJ6 Ribosome-binding factor A n=4 Tax=Anaplasma RepI... 97 2e-19 UniRef50_Q7MQU1 Ribosome-binding factor A n=1 Tax=Wolinella succ... 96 3e-19 UniRef50_Q1NKW1 Ribosome-binding factor A n=1 Tax=delta proteoba... 96 3e-19 UniRef50_A9BI93 Ribosome-binding factor A n=1 Tax=Petrotoga mobi... 95 5e-19 UniRef50_A6GW80 Ribosome-binding factor A n=12 Tax=Bacteroidetes... 95 5e-19 UniRef50_B3ER34 Putative uncharacterized protein n=1 Tax=Candida... 95 6e-19 Sequences not found previously or not previously below threshold: >UniRef50_B7V1F5 Ribosome-binding factor A n=6 Tax=Gammaproteobacteria RepID=RBFA_PSEA8 Length = 130 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 57/131 (43%), Positives = 89/131 (67%), Gaps = 1/131 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R QR+ +MQ+E+A ++QREIKDPRLG + T++GVE+SRD+A+AKV++T + Sbjct: 1 MAKDYSRTQRIGDQMQRELAQLIQREIKDPRLG-LVTITGVEVSRDVAHAKVFITVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D + ++ L +A+G++R LLGK+M+LR VP+L F YD S+ G +S L+ V D Sbjct: 60 DAGKIALNMEILNDAAGYLRMLLGKSMKLRSVPQLHFHYDESIRRGAELSALIERAVAED 119 Query: 121 EERRVNPDDSK 131 R + + Sbjct: 120 GRRHGDDETED 130 >UniRef50_Q48E78 Ribosome-binding factor A n=11 Tax=Gammaproteobacteria RepID=RBFA_PSE14 Length = 138 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 87/135 (64%), Gaps = 4/135 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKE+ R QR+ +MQ+E+A +++REIKDPR+G + T++ V++SRD+ +AK+++T + Sbjct: 1 MAKEYSRTQRIGDQMQRELAQLIRREIKDPRVG-LVTITAVDVSRDVGHAKIFMTVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + IK L A+GF+R L + M+LR VP+L F YD S+V G +S L+ V D Sbjct: 60 SAEEIAQTIKVLNSAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAQD 119 Query: 121 ---EERRVNPDDSKE 132 +E +PD E Sbjct: 120 GQHQEGSASPDAKPE 134 >UniRef50_Q3KI83 Ribosome-binding factor A n=14 Tax=Proteobacteria RepID=RBFA_PSEPF Length = 133 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 89/134 (66%), Gaps = 3/134 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKE+ R QR+ +MQ+E+A +++RE+KDPR+G + T++ VE+SRD+ +AK+++T + Sbjct: 1 MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVG-LVTITAVEVSRDVGHAKIFITVMGQD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + + IK L A+GF+R L + M+LR VP+L F YD S+V G +S L+ V D Sbjct: 60 NAEDIAQSIKVLNAAAGFLRMQLAREMKLRSVPQLHFHYDESVVRGAHLSALIERAVAED 119 Query: 121 EER--RVNPDDSKE 132 + P+D+KE Sbjct: 120 NQHVAAAEPEDTKE 133 >UniRef50_Q1GXD5 Ribosome-binding factor A n=3 Tax=Betaproteobacteria RepID=RBFA_METFK Length = 125 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 50/128 (39%), Positives = 78/128 (60%), Gaps = 5/128 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R RVA+++Q+E+A +LQ E+KDPR+ M TV+ VE+S D+++AKVY T Sbjct: 1 MVKEFSRSDRVAEQIQRELADLLQFEVKDPRVSSMVTVTEVEVSGDMSHAKVYYT----- 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K L++ +GF+RS L + + LR VP+L F YD S+ GMR++ L+ + Sbjct: 56 APQGTPELQKGLEKTAGFLRSQLARRLLLRTVPQLHFVYDASIDRGMRIAKLIDEALPPV 115 Query: 121 EERRVNPD 128 + + + Sbjct: 116 ADPDQDSE 123 >UniRef50_Q65SL1 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_MANSM Length = 131 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 87/132 (65%), Positives = 115/132 (87%), Gaps = 1/132 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M++EF R RVAQE+QKEIA+ILQRE+KDPR+G M TVS VE+SRDLAYAK++VTFL + Sbjct: 1 MSREFKRSDRVAQELQKEIAVILQREVKDPRIG-MVTVSDVEVSRDLAYAKIFVTFLFNN 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D++A+K G+KAL++A+ +IRSL+GKAMRLRIVPEL F YD SLVEGMRMSNLVT+VV+ D Sbjct: 60 DDEAIKQGMKALEKAAPYIRSLVGKAMRLRIVPELRFEYDRSLVEGMRMSNLVTNVVRSD 119 Query: 121 EERRVNPDDSKE 132 +ER ++ ++ ++ Sbjct: 120 KERHIDEENGED 131 >UniRef50_Q5NZS0 Ribosome-binding factor A n=1 Tax=Aromatoleum aromaticum EbN1 RepID=RBFA_AZOSE Length = 127 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 54/130 (41%), Positives = 86/130 (66%), Gaps = 3/130 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R QRVA+++++E+A +++ E+KDPR+G T++ VE++ D A+AKV+ T + Sbjct: 1 MPKEFSRSQRVAEQVRRELAELIRLEVKDPRVG-FITLTDVEITPDYAHAKVFFTSMKG- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E+ + + L ASGF+R LGK +R+ +PEL F YD+S+ G RMS L+ VV+ D Sbjct: 59 -EEGLDEILTGLHRASGFLRRELGKRVRIHTLPELHFHYDSSVERGSRMSQLIDQVVRDD 117 Query: 121 EERRVNPDDS 130 + R + +S Sbjct: 118 DARHKDDPES 127 >UniRef50_A9KNW3 Ribosome-binding factor A n=23 Tax=Bacteria RepID=RBFA_CLOPH Length = 136 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 2/131 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + R+ QE+QKE+++++ RE+KDPR+ MT++ VE++ DL AKVY++ L Sbjct: 1 MRKNSIKNTRINQEVQKELSMLISRELKDPRINPMTSIVAVEVAPDLKTAKVYISVLG-- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE + K + L+ A+ F+R L + + LR PEL F D S+ G+ MS L+ V + Sbjct: 59 DELSQKNTLAGLKSAAPFLRGQLARGINLRNTPELLFVVDQSIEYGVSMSKLINEVNAGN 118 Query: 121 EERRVNPDDSK 131 + + Sbjct: 119 HKASDEEESDD 129 >UniRef50_Q18BH6 Ribosome-binding factor A n=6 Tax=Clostridium RepID=RBFA_CLOD6 Length = 126 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 82/131 (62%), Gaps = 5/131 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + R +R+A+E++K ++ +L +KDPR+ M +V+ VE++ DL YA VYV+ L Sbjct: 1 MA-SYNRTRRIAEEIRKVVSTMLINGVKDPRITSMVSVTDVEVTNDLRYAYVYVSILGGD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E + + L+ A G+IR +GK ++LR +PE+ F D+S+ +GM M +L+ V + + Sbjct: 60 EE----STLTGLKSAGGYIRREVGKNIKLRYIPEIVFKLDDSIEKGMYMDSLIKRVNEKN 115 Query: 121 EERRVNPDDSK 131 ++ + + + Sbjct: 116 AQQNEDENYDE 126 >UniRef50_Q3IJ52 Ribosome-binding factor A n=221 Tax=Gammaproteobacteria RepID=RBFA_PSEHT Length = 166 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 77/131 (58%), Positives = 100/131 (76%), Gaps = 1/131 (0%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +EF R RVAQ++QKEIA+ILQREIKDPRLG M TVS VE+SRDL+YAK+++T N +D+ Sbjct: 2 REFSRTDRVAQQIQKEIAVILQREIKDPRLG-MVTVSAVEVSRDLSYAKIFITVFNTQDD 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 +A K L EA+G+IRSLLGK +R RI+PEL F DNSL+EGMR+SNLV S+++ D Sbjct: 61 NAAKQSANVLNEATGYIRSLLGKRIRARIMPELKFLVDNSLMEGMRISNLVDSIIREDNA 120 Query: 123 RRVNPDDSKED 133 + V + ED Sbjct: 121 KHVADETDVED 131 >UniRef50_B5JRR1 Ribosome-binding factor A n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRR1_9GAMM Length = 142 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 85/132 (64%), Gaps = 4/132 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R RVA ++QK++A +++ E+KDPRL T+ V ++RDL+ AK+Y+T L+DK Sbjct: 14 MAKDYPRSYRVADQIQKDLANLIRTEVKDPRLSDFVTLEEVRVTRDLSQAKIYITTLDDK 73 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ED+ L ASGF+R +LGK +RLR++P+L F YD + E R+ L+ + D Sbjct: 74 AEDSA----AVLNRASGFLRGVLGKRLRLRVIPQLHFIYDATQEEAQRIDGLIREAIASD 129 Query: 121 EERRVNPDDSKE 132 E+ + DS + Sbjct: 130 EQHHADDSDSGD 141 >UniRef50_Q482T8 Ribosome-binding factor A n=2 Tax=Alteromonadales RepID=RBFA_COLP3 Length = 142 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 76/133 (57%), Positives = 98/133 (73%), Gaps = 2/133 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+E+ R RV Q++QKEIA IL REIKDPRL MTTVS VE++RDLAYAK++VTF ND Sbjct: 1 MAREYARTDRVGQQIQKEIATILMREIKDPRLS-MTTVSAVEVTRDLAYAKIFVTFFND- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ++D +KA ++ L EA G+IRSLLGK +R RI+P L F YD+S+ EG+RMS LV V D Sbjct: 59 NQDEIKASLEVLAEAEGYIRSLLGKRLRARIMPHLRFVYDSSMSEGVRMSALVDQAVASD 118 Query: 121 EERRVNPDDSKED 133 + DD++ D Sbjct: 119 KNGDAEVDDTQVD 131 >UniRef50_Q0A798 Ribosome-binding factor A n=3 Tax=Ectothiorhodospiraceae RepID=RBFA_ALHEH Length = 130 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 2/131 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M ++F R +RV +++Q+E+A +++ E++DPRLG M TVS V +SRDLA+AKV+VT L Sbjct: 1 MPRDFPRTRRVGEQIQRELAELIRDELRDPRLG-MVTVSEVTVSRDLAHAKVFVTALGGS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DED K ++ L A+G++R LLG+ +R+R VP L F +D + G R+S L+ V+ D Sbjct: 60 DEDNAK-TVEVLTRAAGYLRKLLGQRLRIRQVPALHFQHDTAFDRGDRLSRLIDEAVEED 118 Query: 121 EERRVNPDDSK 131 ++ + Sbjct: 119 RQQHDDDKPDN 129 >UniRef50_Q5X1C4 Ribosome-binding factor A n=6 Tax=Legionella RepID=RBFA_LEGPA Length = 123 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+ F R R+A+ +Q+++ALI+ +EIKDPRL T+S V+++ DL +AK+Y T LN Sbjct: 1 MSNNFKRTDRIAEMIQRKLALIIPQEIKDPRLKGFVTISAVKVAADLGHAKIYFTVLN-- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + L A+ ++RS L +++ LR VP+L F YD S+ G R+S L+ V D Sbjct: 59 --EDKSVVTNILNGAASYLRSALARSITLRTVPQLHFIYDESIEYGQRLSRLIDEVNPPD 116 Query: 121 EERRVN 126 N Sbjct: 117 SSSDDN 122 >UniRef50_A4IMD9 Ribosome-binding factor A n=50 Tax=Firmicutes RepID=RBFA_GEOTN Length = 128 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 3/127 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV ++M+KE++ I+ R++KDPR+G TV+ V ++ DL AKVY++ D ++ Sbjct: 2 NIRATRVGEQMKKELSDIIGRKLKDPRIG-FVTVTDVRVTGDLQQAKVYISVFGDDEQ-- 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + +KAL++A GFIRS +G+ +RLR PE+ F D ++ G R+ L+ + D Sbjct: 59 RENTLKALEKAKGFIRSEIGQRIRLRKTPEILFEIDETIEYGSRIERLIRQISDEDGRDS 118 Query: 125 VNPDDSK 131 +D Sbjct: 119 EEVNDEP 125 >UniRef50_C4Z5N8 Ribosome-binding factor A n=10 Tax=Firmicutes RepID=RBFA_EUBE2 Length = 130 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 2/132 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + R+ E+ KE++ I++ EIKDPR+ MT+V VE++ DL K Y++ L Sbjct: 1 MRKNSVKNTRINGEVLKELSNIIRSEIKDPRINPMTSVVAVEVAPDLKTCKAYISVLG-- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE + K I L+ A G+IR L + + LR PE+ F D S+ G+ MS L+ V +HD Sbjct: 59 DEKSQKDTITGLKSAEGYIRRQLARTVNLRNTPEIRFILDQSIEYGINMSKLIDEVTEHD 118 Query: 121 EERRVNPDDSKE 132 + V +D E Sbjct: 119 NKMHVEVEDETE 130 >UniRef50_A4BAM6 Ribosome-binding factor A n=2 Tax=Gammaproteobacteria RepID=A4BAM6_9GAMM Length = 137 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 8/138 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA R +++ ++QK++++I+QRE+KDPR+G M T++ V++S DL+YA VY T + Sbjct: 1 MASNSSRIRKIGDQIQKDLSVIIQREVKDPRVG-MVTINDVKVSSDLSYADVYFTCMAFG 59 Query: 59 -----DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + E K K L A+GF+R+ L + ++LR++P+L F YD + G R+S L+ Sbjct: 60 PQSEAEAQEQERKEQEKLLNRAAGFMRTQLAQGLKLRVIPQLRFHYDVVIETGARVSQLI 119 Query: 114 TSVVKHDEERRVNPDDSK 131 + D++R D Sbjct: 120 DEAREQDQKRSGQEQDED 137 >UniRef50_B2A398 Ribosome-binding factor A n=9 Tax=Firmicutes RepID=RBFA_NATTJ Length = 131 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 82/126 (65%), Gaps = 3/126 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ +E++K I+ ILQRE+KDP +G TV+ V++S DL +AKV+V+ L +++ + Sbjct: 5 RKEKLQEELKKIISDILQREVKDPSVG-FVTVTSVDLSGDLRHAKVFVSILG--EKENQQ 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 ++ L++A+GFIRS LGK +RLR VPE+ F +D S+ G ++ L+ + ++ Sbjct: 62 DSLRGLEKATGFIRSELGKRVRLRHVPEIVFKFDESIEHGDHINKLLKQMNLGEDNEDNE 121 Query: 127 PDDSKE 132 ++ + Sbjct: 122 DKENND 127 >UniRef50_B9KZ59 Ribosome-binding factor A n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RBFA_THERP Length = 129 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 5/132 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M R R+A+ ++ EIA I+QRE++DPRLG +V+ VEMS DL +AKV+V+ Sbjct: 1 MP--SYRQARLAEFLRDEIAAIIQRELRDPRLG-FVSVTRVEMSPDLRHAKVFVSIYGSH 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E +A ++ALQ A+GFIR L+ + R +PEL F D SL +++ L+ + + Sbjct: 58 EEQ--EAALEALQGAAGFIRRLIAPHLHTRHIPELHFKLDRSLEHAEQVARLLRQIQQER 115 Query: 121 EERRVNPDDSKE 132 + + + E Sbjct: 116 QRDESAVESTPE 127 >UniRef50_B8JFY8 Ribosome-binding factor A n=4 Tax=Anaeromyxobacter RepID=RBFA_ANAD2 Length = 139 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 11/137 (8%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 RP RVA+E + E++ IL R +KDPR+ TV+G +MS DL A VYV+ DE Sbjct: 5 NRPARVAEEFRHELSAILARGLKDPRITGFVTVTGSKMSPDLKEATVYVSIHG--DERVR 62 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH------ 119 K LQ A+GF++ + +A+RLR P L F YD S+ G R+ L+ Sbjct: 63 KDTFAGLQAAAGFLQREVSRALRLRNTPHLRFVYDESVARGDRIERLLREARTQGQAAPA 122 Query: 120 ---DEERRVNPDDSKED 133 + PDD E+ Sbjct: 123 PDVEPAPGAAPDDEAEE 139 >UniRef50_Q3J9B7 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_NITOC Length = 127 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 52/132 (39%), Positives = 82/132 (62%), Gaps = 5/132 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M++EF R +RV + +Q+E+A + Q E+KDPR+ + TVS V +S DL AK YVTFL Sbjct: 1 MSQEFSRARRVGELLQRELARLFQEELKDPRVK-LVTVSHVRVSPDLRQAKAYVTFLG-- 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E+ + + L +A+GF++ L + + LR++P L F YD+S+ G R+S L+ V+ Sbjct: 58 KEEDTQEQLAVLNKAAGFLQHGLSQRVELRVIPRLQFVYDDSIERGRRLSALIDKAVQ-- 115 Query: 121 EERRVNPDDSKE 132 +E D+S E Sbjct: 116 KETDGESDNSTE 127 >UniRef50_C2KV11 Ribosome-binding factor A n=1 Tax=Oribacterium sinus F0268 RepID=C2KV11_9FIRM Length = 138 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 76/127 (59%), Gaps = 2/127 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K + QR +++++ ++L+++ E+KD R+ V+GV+++ DL Y KV+V+ L Sbjct: 1 MKKLSFKNQRRNEDVRRCLSLLIREEVKDSRVSPFCDVTGVDLTPDLQYCKVFVSCLGS- 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E+ + I+ L+ A GF+R L ++ LR PEL F D+S+ G RM L++ V K D Sbjct: 60 -EEELGKTIEGLKAAGGFLRRELAGSLNLRHTPELQFIADHSVEYGSRMDALISQVSKED 118 Query: 121 EERRVNP 127 +ER V Sbjct: 119 KERAVGE 125 >UniRef50_Q1K0G2 Ribosome-binding factor A n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0G2_DESAC Length = 119 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 5/124 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R RVA+++ KEI+ I+ R ++DPR+G T++ V++S DL +AK++ T + Sbjct: 1 MA--TQRTYRVAEQIHKEISDIMLRGLRDPRVG-FVTITSVDISSDLRHAKIFFTVMG-- 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E + + L A F+R LGK M+LR VP+L F YD S+ G + L+ Sbjct: 56 EEADAEKTQQGLDSAVPFLRRELGKRMKLRHVPDLVFKYDTSIAYGSHIEELLKEAGITH 115 Query: 121 EERR 124 ++ Sbjct: 116 DDDE 119 >UniRef50_C7RU80 Ribosome-binding factor A n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RU80_9PROT Length = 136 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 3/132 (2%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 + F R R+A+++++E+A +++ E++DPR+G M +++ V++S D A+AKV+ + L + Sbjct: 4 NRGFARRDRIAEQIRRELAELIRTELRDPRVG-MISLTEVQVSADYAHAKVFFSTLAGSE 62 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + + A LQ A GF+R LGK + + PEL F +D SL G ++S L++ V E Sbjct: 63 Q--LDAVYAGLQHAGGFLRRELGKRISIHATPELHFVFDASLEHGAQLSKLISEAVAISE 120 Query: 122 ERRVNPDDSKED 133 + D Sbjct: 121 HSSPADQAPEAD 132 >UniRef50_A6T0Y7 Ribosome-binding factor A n=3 Tax=Betaproteobacteria RepID=RBFA_JANMA Length = 128 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 6/130 (4%) Query: 1 MAKEFG----RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF 56 MAK R RVA ++Q++++ I+ E+KDPR+G M T++ V+++ D A+AKV+ T Sbjct: 1 MAKHSKSIPGRGLRVADQIQRDLSEIIAFELKDPRVG-MITITEVQVTPDYAHAKVFFTM 59 Query: 57 LNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 L+DK +D +K + L ASG+IR LG+ + + +PEL F +D S G+ MS L+ Sbjct: 60 LSDK-KDDIKNTVSGLTAASGYIRGQLGRRLTIHTLPELHFVHDTSTARGIEMSKLIDEA 118 Query: 117 VKHDEERRVN 126 + + Sbjct: 119 NASRAKDAED 128 >UniRef50_C7R7H8 Ribosome-binding factor A n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7H8_KANKD Length = 122 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 56/118 (47%), Positives = 87/118 (73%), Gaps = 1/118 (0%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +RVA ++Q+++A++LQRE+KDPRLG + TVSGVE++ DL AKV+VTFL +E +K Sbjct: 5 RAKRVADQIQRDLAVLLQREMKDPRLG-IVTVSGVEVTSDLQNAKVFVTFLGKDEEQEIK 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 ++ L A+GF+RS L K++R+R VP L F +D S+VEG +M++L+ + DE ++ Sbjct: 64 QALEVLTGAAGFLRSQLAKSIRMRSVPSLRFLFDKSIVEGQKMTSLIDKAISEDESKK 121 >UniRef50_C5BPV8 Ribosome-binding factor A n=9 Tax=Proteobacteria RepID=RBFA_TERTT Length = 132 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 1/133 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M KEF R RVA MQ+ +A ++ EI+DPR+G M ++ VE+SRDLA AKV+VTF+ Sbjct: 1 MPKEFNRSDRVADAMQRSLANAIRMEIQDPRVG-MVNINAVEVSRDLALAKVFVTFIGVD 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE A++ + L +A+GF+R+++ K + +R P + F+YD + V G +S+L+ + D Sbjct: 60 DERAIETSVSILNKAAGFLRNVVSKDLTIRSTPRIHFYYDKTAVRGQVLSSLIDRAIAED 119 Query: 121 EERRVNPDDSKED 133 + + +E+ Sbjct: 120 KSHHQDDAGQEEE 132 >UniRef50_A0LE17 Ribosome-binding factor A n=1 Tax=Magnetococcus sp. MC-1 RepID=RBFA_MAGSM Length = 123 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R +RV ++KE+A +L R EIKDPRLG + V +S DL+YAKVY T + D+ Sbjct: 2 TIRTERVGNAIRKEVASMLTRGEIKDPRLGGFVNIQEVRVSPDLSYAKVYYTVFGESDQA 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 V Q ASGF+R+++ K ++LR PEL F D+ R+ L+ + + Sbjct: 62 GVADAW---QRASGFLRNVIAKRLKLRHAPELRFELDHVADYSKRIDELLNGLEIPPADD 118 Query: 124 RVN 126 Sbjct: 119 SDE 121 >UniRef50_A1U5Z9 Ribosome-binding factor A n=7 Tax=Gammaproteobacteria RepID=RBFA_MARAV Length = 143 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 84/135 (62%), Gaps = 5/135 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+E+ R R+ +MQ+E+A ++QRE+KDPR+G M TV+ V++SRDL YA +Y++ L+ + Sbjct: 1 MAREYSRVDRIGDQMQRELAQLIQREVKDPRVG-MVTVNDVKVSRDLGYADIYISLLSTE 59 Query: 61 ----DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D V+ + L +ASGF+R +G+AM+LR+VP L F +D L + +M L+ Sbjct: 60 ELTEDSPEVQDSLTVLNKASGFLRGQVGRAMKLRVVPHLRFHFDKLLGQSRKMDRLIREA 119 Query: 117 VKHDEERRVNPDDSK 131 V + +D Sbjct: 120 VGDKPAVPRDDNDDP 134 >UniRef50_C5RLI4 Ribosome-binding factor A n=2 Tax=Clostridium RepID=C5RLI4_CLOCL Length = 127 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 4/131 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+ R +++ +EM+K+I+ +++ ++DPRL M +V+ V++++DL YAKVYV+ Sbjct: 1 MAR--YRSEKINEEMKKQISDVIRNRVRDPRLAPMISVTSVDVTKDLKYAKVYVSIFGSD 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E +K L+ +SGFIR + + LR PEL F D S+ GM + L+ S+ +++ Sbjct: 59 TEK--DESLKILKNSSGFIRREVASKINLRSTPELLFNLDTSIEYGMHIDRLIHSIKENE 116 Query: 121 EERRVNPDDSK 131 + + + Sbjct: 117 DNGDESDTEEN 127 >UniRef50_Q21H62 Ribosome-binding factor A n=1 Tax=Saccharophagus degradans 2-40 RepID=RBFA_SACD2 Length = 128 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R R+A +Q+ +A ++Q E++DPRLG + ++ V+++RDL+ AKVYVT + K Sbjct: 1 MPREFFRSDRIADAIQRSLARVIQTEVRDPRLG-LVNINSVDVTRDLSIAKVYVTVVGAK 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E + +K L +A+GF+R+++ K + +R P L+FFYD + V+G +SNL+ V D Sbjct: 60 EESESEVAVKVLNKAAGFLRNVIAKELTMRSAPRLSFFYDRTAVQGQNLSNLIDRAVAAD 119 Query: 121 EERRVNPDD 129 ++R + + Sbjct: 120 KQRSEDEGE 128 >UniRef50_Q057K0 Ribosome-binding factor A n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=RBFA_BUCCC Length = 116 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 54/116 (46%), Positives = 83/116 (71%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K+F R R+ + + KEIA+I+Q+ ++DPRL T++ V++S DL+YAKV++TFLN Sbjct: 1 MLKDFSRSMRLERSLYKEIAVIIQKNLRDPRLNSFITITEVKLSYDLSYAKVFITFLNYD 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D+ +K + LQ A+G+IRSLL K + LRIVP+L F YD SL+ G+ +S L+ ++ Sbjct: 61 DKKNIKIILGILQNATGYIRSLLNKKIYLRIVPKLFFVYDTSLINGIFISELIKNI 116 >UniRef50_D0L0S5 Ribosome-binding factor A n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0S5_HALNC Length = 139 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 80/131 (61%), Gaps = 4/131 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + F R QRVA+++++EIA +L+ EI+ + + TV+ E++RDL YAK++ + LN Sbjct: 1 MPQGFSRHQRVAEQIRREIADLLREEIRQAGIS-LLTVTDCEVTRDLGYAKIFYSVLNSS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + + L A+GF+R+ L MRLR VP LTF +D S+ GM+M L+++V K D Sbjct: 60 ERERAQ---AWLDSAAGFLRTELAHRMRLRSVPRLTFQFDASIERGMQMDALISAVRKQD 116 Query: 121 EERRVNPDDSK 131 +E D Sbjct: 117 DEHVQTDDADD 127 >UniRef50_Q74CT2 Ribosome-binding factor A n=1 Tax=Geobacter sulfurreducens RepID=RBFA_GEOSL Length = 118 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 3/120 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 F R ++VA+ + + ++ ++ + +KDPR+G T++GV+++ D+ A +Y T + D + A Sbjct: 2 FNRSEKVAEAIHELVSGLIVKGMKDPRIG-FITITGVKVTDDIRQATIYYTVMGDDE--A 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + L A+GF+R +GK +RL+ PEL F YD S+ G R+ L+ + Sbjct: 59 RVSTARGLASATGFLRREIGKQLRLKFAPELHFKYDQSIEYGNRIDQLLKEIETEKGSDD 118 >UniRef50_B1I386 Ribosome-binding factor A n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I386_DESAP Length = 119 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 4/118 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M RP+R+A+ ++KEI+ +L R++KDPRLG TV+ VE+S DL YAKV+V+ L Sbjct: 1 MGPVIFRPERLAEVIKKEISDLL-RQMKDPRLG-FVTVTAVEVSSDLRYAKVFVSVLGSN 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 ++ A +K L+ A GFIR+ LGK +RLR PE++F +D S+ EG R+ ++ + K Sbjct: 59 EDQ--DASLKVLRGAQGFIRTELGKRIRLRYTPEVSFVHDPSIEEGTRIIQIIRDIGK 114 >UniRef50_B8FCY7 Ribosome-binding factor A n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=RBFA_DESAA Length = 123 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 3/125 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K GR RVA +Q+E++ ++Q+ I DPRL T++GV+M++DL A+VY +E Sbjct: 2 KSIGRQDRVAGRIQQELSALIQKRINDPRLE-WATITGVKMTKDLKIARVYYCVFG--EE 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + +A Q+A GFI+ L K + LR +PEL FF+D S G ++ +++ + D Sbjct: 59 EKKIKVGEAFQQAHGFIKRELAKKLGLRYMPELEFFFDESFDYGRKIESILREIGPLDSP 118 Query: 123 RRVNP 127 Sbjct: 119 EEPEE 123 >UniRef50_B8D9G1 Ribosome-binding factor A n=4 Tax=Buchnera aphidicola RepID=RBFA_BUCA5 Length = 120 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 53/120 (44%), Positives = 84/120 (70%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K F R R+AQE+QK+IA I+Q +KDPR+ + TVS V++S+DL+YA+++V+FL Sbjct: 1 MEKLFNRSDRIAQELQKKIAAIIQHSLKDPRIKTIITVSEVQVSKDLSYAQIFVSFLESD 60 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + VK I L AS +IR LL K M+LRIVP + F +D+S ++G ++S ++ ++ K + Sbjct: 61 NNEKVKKKITILNRASSYIRKLLCKRMKLRIVPNIIFHHDDSFLKGNKISCILENLTKKE 120 >UniRef50_B9M1G1 Ribosome-binding factor A n=8 Tax=Desulfuromonadales RepID=RBFA_GEOSF Length = 123 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 F R ++VA+ + + ++ +L + +KDPR+G T++GV+++ D+ A +Y T + +E Sbjct: 2 FKRSEKVAEAVHELVSELLVKGLKDPRIG-FVTITGVKVTDDMHLATIYFTVIGSDEEK- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 KA + L A GFIR +GK+ R+R VP++ F YD S+ G R+ +++ + + + Sbjct: 60 -KATEQGLNSARGFIRKEMGKSFRMRYVPDIVFKYDASVEYGSRIESILKEIGSPEHDDN 118 Query: 125 VNPD 128 + Sbjct: 119 DKEN 122 >UniRef50_A4XL69 Ribosome-binding factor A n=15 Tax=Firmicutes RepID=RBFA_CALS8 Length = 135 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 85/132 (64%), Gaps = 3/132 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +F R RVA+E++KEI+ I+Q E+KDPR+ + ++ V MS+DL +AKV+V+ DK+ Sbjct: 2 QFERADRVAEEIKKEISDIIQHELKDPRICAELISIVKVNMSKDLRHAKVFVSIF-DKNR 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV-KHDE 121 + + + +KAL+ A +IR + + + LR PE++F D+S+ G R+S ++ + DE Sbjct: 61 ENITSTMKALENAKPYIRREISRRINLRFSPEISFELDDSIEYGARISQILNQLNIAKDE 120 Query: 122 ERRVNPDDSKED 133 E + D+S+ + Sbjct: 121 EEEKSQDESEGE 132 >UniRef50_A4J5X1 Ribosome-binding factor A n=1 Tax=Desulfotomaculum reducens MI-1 RepID=RBFA_DESRM Length = 120 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 78/116 (67%), Gaps = 3/116 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 RP+RVA+ ++KE+A +++ +IKDPR+G T++GVE++RDL++AK++++ + Sbjct: 2 SHRPERVAEAIKKEVADLIRNDIKDPRIG-FVTITGVEVTRDLSFAKIFISVMGSDAH-- 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + LQ+++G++RS +G+ ++LR PEL F D SL G R++ ++ + + Sbjct: 59 RQETLSILQKSAGYMRSEIGRRIKLRHAPELIFKLDTSLDHGTRIAEILHEINSQE 114 >UniRef50_Q2RJM4 Ribosome-binding factor A n=5 Tax=Bacteria RepID=RBFA_MOOTA Length = 122 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 3/121 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R QRVA+EM+KEIA I++ E+KDPRL + +V+GVE+S D YAKVYV+ DE+ Sbjct: 4 TARNQRVAEEMKKEIARIIRDEVKDPRLEAGLVSVTGVELSNDRHYAKVYVSIYG--DEE 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 A ++ L A+ FIR +G+ + LR PE+TF D S+ G ++ L+ V + Sbjct: 62 ARNQAMEGLARATSFIRREIGQRLSLRYTPEITFKLDVSIEHGDHINRLLARVRAGEYAD 121 Query: 124 R 124 Sbjct: 122 E 122 >UniRef50_C0WBC7 Ribosome-binding factor A n=1 Tax=Acidaminococcus sp. D21 RepID=C0WBC7_9FIRM Length = 119 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 72/124 (58%), Gaps = 5/124 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K R +++ +++E++ +L RE+KDPR+ T++GVE++ +L+YAK+YV+ Sbjct: 1 MSK--LRAEKLQALIKQELSNMLLREVKDPRVK-FVTITGVEVTNELSYAKIYVSLYGS- 56 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E + K LQ G+ R+ + K ++LR+ P L+F D S+ + +++ + + + Sbjct: 57 -EKQQEEAWKGLQSCLGYFRTEIAKRIKLRMAPHLSFHKDTSMEYSAHIESILKEIKEKE 115 Query: 121 EERR 124 + Sbjct: 116 DHHE 119 >UniRef50_B3PI97 Ribosome-binding factor A n=1 Tax=Cellvibrio japonicus Ueda107 RepID=RBFA_CELJU Length = 136 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 79/132 (59%), Gaps = 1/132 (0%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R RV+ +Q+ +A ++ +E++DPRLG M ++ V +SRD+A+AKVYVTF+ Sbjct: 1 MPREFTRSDRVSDAIQRLLAQVIPQEVRDPRLG-MVNINAVAVSRDMAFAKVYVTFVGVT 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE GI L +ASGF+RS + + + +R VP+L F YD + + G +S+L+ + D Sbjct: 60 DEPKSLEGIGILNKASGFLRSFVARELSMRTVPKLQFIYDKTSIRGQELSSLIDRAIAED 119 Query: 121 EERRVNPDDSKE 132 + Sbjct: 120 RLHPQGDQTDDQ 131 >UniRef50_B0CDK8 Ribosome-binding factor A n=10 Tax=Cyanobacteria RepID=RBFA_ACAM1 Length = 138 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RVA+ +++E++ +L IKD R+G M +V+ V++S DL +AK++V+ + A Sbjct: 5 RRVSRVAELIKREVSQMLLHSIKDDRVGSGMISVTAVDLSGDLQHAKIFVSIYGTDE--A 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + L+ A+G++R LG + LR PE+ F D S EG ++ +L+ + + + Sbjct: 63 RAETMAGLESATGYVRKQLGHRIHLRRTPEVIFCEDRSFEEGNQVLSLLHKLDHERQNKP 122 Query: 125 VNPDDSK 131 + Sbjct: 123 AASTEKP 129 >UniRef50_A5WBS6 Ribosome-binding factor A n=19 Tax=Moraxellaceae RepID=RBFA_PSYWF Length = 140 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 5/134 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK---- 60 R QR+ ++Q+E+A++++ ++ DPRL T+S V++S DL YA VYVT + + Sbjct: 2 NQRLQRLGDQIQRELAVLIRDDVNDPRLTGFVTISSVKVSSDLGYADVYVTIMEPELNDA 61 Query: 61 -DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + + + +K L +A+GF+R+ L +++ R P L F YD G M +L+ V Sbjct: 62 MSKHSHEESLKVLNKAAGFLRTELSHSLKTRTTPRLRFHYDEVTARGNYMMDLINKAVTK 121 Query: 120 DEERRVNPDDSKED 133 E+ + D + D Sbjct: 122 TEQTSADDDADRLD 135 >UniRef50_B2GBN8 Ribosome-binding factor A n=86 Tax=Lactobacillales RepID=RBFA_LACF3 Length = 120 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 2/121 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + R +R+AQ++Q+E+ IL + ++DPR+ TV+GV+++ DL A +Y T L+ Sbjct: 1 MPNKQFRVERLAQQIQREVDDILLKRVRDPRVNG-VTVTGVDVTGDLQQATIYYTILSKL 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DA + L +A+G +RS LG + + PE+ F D S+ G R+ L+ + K++ Sbjct: 60 ASDA-EKTQTGLDKATGLVRSELGSRLNIFKAPEIKFVRDPSIEYGSRIDELLNELHKNN 118 Query: 121 E 121 E Sbjct: 119 E 119 >UniRef50_Q1YSY1 Ribosome-binding factor A n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSY1_9GAMM Length = 142 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 87/135 (64%), Gaps = 3/135 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R +RV+ +Q+E+A +++ E++DPR+G M V+ V++SRDLAY KV+V F+ D+ Sbjct: 1 MPREFTRAERVSDSVQQELATLIRSEVRDPRVG-MVNVTEVQISRDLAYGKVFVNFVGDR 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +++ + + AL ASG++R LLG +++LRIVP+L F +D + G +S L+ + + Sbjct: 60 EQEQIDEAMAALNGASGYLRKLLGASIQLRIVPKLNFIFDETGRRGQHLSALIDLAISKE 119 Query: 121 --EERRVNPDDSKED 133 + D +D Sbjct: 120 MPADDAGQQDTDPKD 134 >UniRef50_Q2LWT9 Ribosome-binding factor A n=2 Tax=Syntrophobacterales RepID=RBFA_SYNAS Length = 123 Score = 131 bits (330), Expect = 8e-30, Method: Composition-based stats. Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 +F R RVA ++ EIA IL R I+DPR+ + TV+GV++S DL A+++ + ++ Sbjct: 3 QFKRADRVADLVKMEIADILLRRIRDPRVSRL-TVTGVKVSDDLRTARIFFVEMG--EDS 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 ++ LQ+A GFIR LGK ++LR VP+L F D+S G R+ L+ + + +E Sbjct: 60 CHPETLEGLQKAGGFIRKELGKRLKLRYVPDLIFKPDSSFAYGSRIDQLINEIHREEEND 119 Query: 124 RVN 126 + Sbjct: 120 GSD 122 >UniRef50_C0QHM3 Ribosome-binding factor A n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=RBFA_DESAH Length = 119 Score = 130 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 3/121 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K + R +RVA +Q+ ++ +++++++DPR+ + T+S V ++ DL A VY + DE Sbjct: 2 KPYPRSERVAARIQEILSDLIKKKVQDPRIE-LVTISSVRLTSDLRIAYVYFSVFG--DE 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 V+ + L+ + GFI+ + + LR +PEL F +D S G M L+ SV+K D+ Sbjct: 59 ARVEEATQGLKSSHGFIKRHVASQLGLRYMPELKFIHDQSFDRGTHMDQLLKSVLKGDDS 118 Query: 123 R 123 Sbjct: 119 E 119 >UniRef50_Q2JW85 Ribosome-binding factor A n=18 Tax=Cyanobacteria RepID=RBFA_SYNJA Length = 149 Score = 130 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 3/124 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RVA+ +++E++ IL EIKD R+G M ++ VE+S DL A+++V+ DE A Sbjct: 5 RRVARVAELIKREVSQILLSEIKDDRVGAGMVSIVDVEVSNDLQNARIFVSIYG--DEAA 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + ++ L A+ F+R +G+ + LR VP + F D SL G R+ L+ + + E ++ Sbjct: 63 QQQTMEGLASATPFVRREIGQRLGLRRVPTVVFLQDRSLERGSRVLALLNQLRQPAEAQQ 122 Query: 125 VNPD 128 Sbjct: 123 QEGS 126 >UniRef50_A2CCY5 Ribosome-binding factor A n=23 Tax=cellular organisms RepID=RBFA_PROM3 Length = 142 Score = 130 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 4/133 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLND 59 MA R +RVA +++E + +L I+D R+ M +++ VE+S DL + K++V+ Sbjct: 1 MAPG-RRVERVAALIRRETSELLIHGIRDERVHQGMVSITNVEVSGDLQHCKIFVSIYG- 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 +E ++ L+ ASGF+R LG+ +++R PE+ F D + +G + NL+ + + Sbjct: 59 -EEIQRSEVLEGLEAASGFLRGELGRRLQMRRAPEVHFHLDRGIEKGTSVLNLLEQLEQQ 117 Query: 120 DEERRVNPDDSKE 132 E +S + Sbjct: 118 RETLGEVQSESDQ 130 >UniRef50_B5YEH6 Ribosome-binding factor A n=2 Tax=Dictyoglomus RepID=RBFA_DICT6 Length = 120 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 2/120 (1%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +R++ +++EI+ IL R +KDPR+ ++ V+MS+DL YA +YV+ ++E Sbjct: 3 QRQERLSALIREEISEILLRRVKDPRISSFLVITEVKMSKDLRYAHIYVSVYGSEEEK-- 60 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 K ++ L+ A GFIRS LGK +R+R VPE+ F D+SL +G R+ + + DE+ Sbjct: 61 KQTMQGLESAKGFIRSELGKDLRIRFVPEIFFELDDSLEKGDRILRKLKELGLEDEQDSE 120 >UniRef50_A1HSB5 Ribosome-binding factor A n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSB5_9FIRM Length = 117 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 3/116 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ + +++E++ I+ E+KDPR+G TV+ VE+S DL YAK++++ + +E A Sbjct: 5 RVEKIQEFIKQEVSKIILTELKDPRIG-FVTVTRVEVSGDLRYAKIFLSLMGSDEEKA-- 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 L A G+IR+ +GK + +R VPEL+ D SL R+ L+ + + + Sbjct: 62 GTWAGLHRALGYIRTEIGKHLGIRHVPELSLHLDESLQYSARIQELLNKIKHEESQ 117 >UniRef50_C2BHN3 Ribosome-binding factor A n=3 Tax=Anaerococcus RepID=C2BHN3_9FIRM Length = 127 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 6/131 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM--MTTVSGVEMSRDLAYAKVYVTFLN 58 M K R R++ E+++EI+ I+ ++ DPRL M +V+ VE++ DL+YA +Y++ L Sbjct: 1 MNK--KRTARISSEVKREISKIIMDDLNDPRLSAEAMVSVTDVEVTNDLSYADIYISVLG 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D ++AL +A G+I+ L+G+ MRLR +PE F +DNS+ G M L+ + Sbjct: 59 DN--KTKDGVMEALNQAKGYIKILIGERMRLRSMPEFRFKFDNSIEHGAYMDKLIAETIA 116 Query: 119 HDEERRVNPDD 129 D++ +D Sbjct: 117 KDKKANEARED 127 >UniRef50_C9RKT5 Ribosome-binding factor A n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKT5_FIBSS Length = 117 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R R+ ++ ++EI+ ++Q+ +KDPR+ + +++ V+++ DL+YAK V+ + E Sbjct: 2 TRRTDRLGEQFREEISKLIQKGLKDPRVSTLASITRVDITEDLSYAKALVSVMGSDKEKR 61 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + L ++GFIR +LGKA+++ VPEL F D +L M + ++ + + E Sbjct: 62 --DTLVGLNNSAGFIRGVLGKALKIFKVPELKFVLDENLEHAMHIEEILAELKQKGE 116 >UniRef50_Q044B6 Ribosome-binding factor A n=58 Tax=Lactobacillales RepID=RBFA_LACGA Length = 123 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 2/119 (1%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV E+ +E+ IL+++I+DPRL T++ VE + DL+YA +Y + L +D Sbjct: 3 HRIGRVEGEILRELTKILRKDIRDPRLSD-ITITAVECTNDLSYATIYYSLL-TEDPAKE 60 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K + L +A G +R LLG+ + + VPEL F D S+ G ++ NL+ V K D+ER Sbjct: 61 KEVAEGLDKAKGMMRHLLGQTLTVYKVPELIFKRDTSVAYGSKIDNLINQVKKQDQERE 119 >UniRef50_C1A8N9 Ribosome-binding factor A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RBFA_GEMAT Length = 146 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 2/129 (1%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E RP RVA+ +++E+A L KDPR+ TV+ VE++RDL +A V+V+ + D Sbjct: 3 EVRRPDRVAEAIREEVATFLSEGAKDPRIRAFVTVTAVEVTRDLRHATVFVSLMGDD--A 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 K+ L + +RS LGK++RLR PE+ F D S+ R+ +L+ + E + Sbjct: 61 DKKSTTAGLASVASHLRSQLGKSLRLRSAPEIHFRTDESVARASRIEHLLAKIRDEREAQ 120 Query: 124 RVNPDDSKE 132 D +++ Sbjct: 121 EPAQDPAQD 129 >UniRef50_Q1MZS3 Ribosome-binding factor A n=1 Tax=Bermanella marisrubri RepID=Q1MZS3_9GAMM Length = 129 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 46/130 (35%), Positives = 81/130 (62%), Gaps = 5/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R QR+ +++++E+A +LQ ++KDPRLG + T++ V+++ DL YA +Y T + Sbjct: 1 MAKDYSRTQRLGEQIKRELAHMLQFDVKDPRLG-IVTLNAVKVASDLGYADIYFTVMKSG 59 Query: 61 ----DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D++ V + L + SGF+R+ L + +R RI P+ F YD +L G +++NL+ Sbjct: 60 MVEADDETVAETEQILNDMSGFLRTELSQILRTRITPQPRFHYDVALERGHKLTNLINQA 119 Query: 117 VKHDEERRVN 126 VK D+ Sbjct: 120 VKSDKREDDQ 129 >UniRef50_Q0VSS0 Ribosome-binding factor A n=3 Tax=Gammaproteobacteria RepID=RBFA_ALCBS Length = 137 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 75/129 (58%), Gaps = 2/129 (1%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 + F R RVA ++Q+E++ +LQ E+KDPR+ + T+ V +SRDL+YA+VY T L + Sbjct: 7 PQGFNRTDRVADQIQRELSRLLQFEMKDPRVN-LATIQDVTVSRDLSYAEVYFTLL-GQG 64 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 E+A + L +ASGF+RS L + + R P+L F YD + +S L+ D Sbjct: 65 EEAGAEAEEVLTKASGFLRSSLAQGLNTRTTPKLRFHYDMTPERAAHLSQLIDEARAEDR 124 Query: 122 ERRVNPDDS 130 E R D++ Sbjct: 125 ELRPEDDET 133 >UniRef50_A7BQM5 Ribosome-binding factor A n=1 Tax=Beggiatoa sp. PS RepID=A7BQM5_9GAMM Length = 122 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 76/124 (61%), Gaps = 3/124 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 KEF R QR+ ++Q+E+A I++REI +P LG M TVS +++S DL YA+VY+T L ++ Sbjct: 2 KEFSRTQRLGVQIQRELADIIRREIVNPHLG-MLTVSSIDLSPDLKYARVYMTVLG--EQ 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 VK I+ L + +G +R L + + R P L F +DNS+ E R+S L+ S+ + + Sbjct: 59 QGVKYTIQHLNQVAGRLRYHLSQRLTTRTTPRLKFVHDNSIEESSRLSALINSLAPNRTK 118 Query: 123 RRVN 126 Sbjct: 119 EDDE 122 >UniRef50_C7H128 MgpA protein n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H128_9FIRM Length = 458 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 4/124 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA+ R R+A+E++K ++ +++DP L M ++ V++S D AKVY + Sbjct: 1 MARG-KRKDRLAEEIKKIVSNAFLLKVRDPILKMAINITAVDVSPDGRNAKVYYVVFSGS 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D+D AL++ IR + + MR+R VP + F YD SL + +++ + Sbjct: 60 DKD---EVAAALKKVEPLIRKEIAENMRVRYVPNICFAYDTSLEYSRHIESILHDIKDKR 116 Query: 121 EERR 124 Sbjct: 117 SYND 120 >UniRef50_C8W4P3 Ribosome-binding factor A n=3 Tax=Clostridia RepID=C8W4P3_DESAS Length = 119 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 48/120 (40%), Positives = 81/120 (67%), Gaps = 3/120 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 RP+R+A+ ++KE++ ++ E+KDPR+G T+++ VE+SRDL++AK++V+ L ++E Sbjct: 3 HRPERLAESIKKEVSDMIINELKDPRIG-FTSITSVEVSRDLSFAKIFVSVLGTEEEQ-- 59 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 KA ++AL A+GFIR+ +G+ +RLR VPEL F D S+ G ++ L+ V E Sbjct: 60 KATVEALSRANGFIRAEIGRRIRLRHVPELAFISDQSIAHGTKIMKLLQDVQVQGEGMHE 119 >UniRef50_A9AV50 Ribosome-binding factor A n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AV50_HERA2 Length = 126 Score = 127 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 4/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK R ++VA+E++ ++ +Q EI+DPRLG T++ V +S DL +A + V+ + D Sbjct: 1 MAKN-KRVEQVAEEIKTILSNAIQFEIQDPRLG-FVTLTSVNVSPDLYHANINVSVMGDD 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 A K + L A GF+R LG+ M+LR VPEL F D ++ M L V + Sbjct: 59 T--ARKDSLATLDRAKGFLRRELGQQMKLRAVPELHFHLDVTIDTRQYMDTLFNQVDEER 116 Query: 121 EERRVNPDDS 130 DD Sbjct: 117 RVNPPKLDDE 126 >UniRef50_A7X1Q2 Ribosome-binding factor A n=133 Tax=Bacillales RepID=RBFA_STAA1 Length = 116 Score = 127 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 47/118 (39%), Positives = 75/118 (63%), Gaps = 3/118 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R +RV ++M+KE+ I+ ++KDPR+G T++ V ++ DL+ AKV++T L + E Sbjct: 2 SSMRAERVGEQMKKELMDIINNKVKDPRVG-FITITDVVLTNDLSQAKVFLTVLGNDKE- 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 V+ KAL +A GFI+S LG MRLRI+PEL + YD S+ G ++ ++ + K D Sbjct: 60 -VENTFKALDKAKGFIKSELGSRMRLRIMPELMYEYDQSIEYGNKIERMIQDLHKQDR 116 >UniRef50_C7RGP1 Ribosome-binding factor A n=2 Tax=Anaerococcus RepID=C7RGP1_ANAPD Length = 128 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 79/132 (59%), Gaps = 6/132 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM--MTTVSGVEMSRDLAYAKVYVTFLN 58 M K R +R++ E++KE++ IL+ ++ DPRL M T++ VE++ DL+YA YV+ L Sbjct: 1 MNK--RRTERISSEVKKELSKILRDDLNDPRLSTEAMVTITDVEVTNDLSYADCYVSVLG 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D + ++AL++A G+I+ L+G+ MRLR +PE F DNS+ G M L+ + Sbjct: 59 DATNK--EDVLEALEQAKGYIKILIGERMRLRSMPEFRFKIDNSIEHGAYMDKLIAETIA 116 Query: 119 HDEERRVNPDDS 130 D++ ++ Sbjct: 117 KDKKANEERENQ 128 >UniRef50_D1BM61 Ribosome-binding factor A n=8 Tax=Veillonellaceae RepID=D1BM61_VEIPT Length = 118 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 71/115 (61%), Gaps = 3/115 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ + +++E++ +L R +KDPR+G TT++ V ++ DL A +YV+ E + Sbjct: 5 RVRKLQEFIKQEVSQMLMRGLKDPRIG-FTTITDVHVTGDLREATIYVSLFGSDKEK--Q 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + AL+ A+G IR+ LGK ++LR +P +TF D SL M + +L+ + K +E Sbjct: 62 DTLIALKHAAGHIRTELGKVLKLRHIPSITFDKDTSLDYSMHIESLLNEIKKDEE 116 >UniRef50_D1R4P7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4P7_9CHLA Length = 132 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 2/129 (1%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R R+ +++ I ++++++++P + MTTV+ V++++DL +AKVYV+ + E Sbjct: 2 SVQRTDRLNSLLREVITEVIKKDVRNPYVSEMTTVTRVDITKDLRHAKVYVSIMGTGAEK 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 + ++AL+ A+GFI + + +R PELTF D+S+ MR+ +L+ + R Sbjct: 62 --EDTLQALRSAAGFIAVNSSQKVVMRFFPELTFVLDDSVDRQMRIESLLREIEDEKSTR 119 Query: 124 RVNPDDSKE 132 DD+ E Sbjct: 120 SEESDDNDE 128 >UniRef50_Q31GK4 Ribosome-binding factor A n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RBFA_THICR Length = 121 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 2/122 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +E RP RVA E++K + IL R+ KDPRL ++ ++S+DL+ A VY T + Sbjct: 1 MNEEVSRPTRVALEIRKTLMEILHRDTKDPRLEK-VNITECKISKDLSIATVYFTIIGVN 59 Query: 61 DEDA-VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 ++D + IKAL++A GF RS +GK M LRI PE+ FFYD + L+ + Sbjct: 60 EKDQPAQDAIKALEKAKGFFRSEIGKRMNLRITPEVRFFYDTVAENASHIEELIFKALHQ 119 Query: 120 DE 121 + Sbjct: 120 KK 121 >UniRef50_Q6MD65 Ribosome-binding factor A n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RBFA_PARUW Length = 131 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 2/128 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R R+ +++ I+ +++R++++P + + TV+ V++SRDL YAKV+++ + E A Sbjct: 3 IQRTDRLNSLLKEVISEVIRRDVRNPYVTELVTVTRVQISRDLRYAKVFISIIGS--EQA 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 I+AL A+GFI + + +R PEL F D+S+ + MR+ L+ + K E R+ Sbjct: 61 KVETIEALNSAAGFIAVNASQKVVMRYFPELNFKLDDSVDKHMRIEELLGKITKERESRQ 120 Query: 125 VNPDDSKE 132 + D E Sbjct: 121 GDNSDQLE 128 >UniRef50_Q04GM9 Ribosome-binding factor A n=2 Tax=Oenococcus oeni RepID=RBFA_OENOB Length = 121 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 4/123 (3%) Query: 1 MAK--EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 M K + R RV +Q+EI+ IL +E+ DPRL T++G++M+ D + A VY T + Sbjct: 1 MPKHAKSARLLRVEGTIQREISEILVKEVSDPRLKD-VTITGIDMTPDFSIAYVYWTIYS 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D + + LQ A G I+ L + M +P+L F D ++ G + L+ + Sbjct: 60 DLAS-SGEKADAGLQAAKGLIKRQLARKMTTFKIPDLIFKRDTAIEYGDHIEQLIAKLNH 118 Query: 119 HDE 121 + Sbjct: 119 ESK 121 >UniRef50_Q3AB99 Ribosome-binding factor A n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RBFA_CARHZ Length = 125 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 3/122 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + +R AQ +++ +A I+ RE+KDPRLG +V+ V+++RDL+ AK+Y++ E+ Sbjct: 6 SHKHERTAQAIKEAVAAIISREVKDPRLG-FVSVTKVDLARDLSQAKIYISVYGS--EED 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K AL A GFI+ L +RLRI+PEL F D S+ G R+ ++ + K E Sbjct: 63 KKNSFIALNSAKGFIKGELASRVRLRIMPELYFVEDPSIEYGARIMEILEGLKKEAGENE 122 Query: 125 VN 126 Sbjct: 123 SE 124 >UniRef50_A1KUJ5 Ribosome-binding factor A n=28 Tax=Neisseriaceae RepID=RBFA_NEIMF Length = 123 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 4/122 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 + + R RV +++ +E+A +++ +KDPR G TV+ VE++RD ++A V+ T L ++ Sbjct: 6 RGYARQDRVKEQIMRELAELVRTGLKDPRAG-FITVNEVEVTRDYSHATVFYTIL---NQ 61 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 DA + + L+ A G +RS L K ++L PEL F YD SL G+ +S L+ V Sbjct: 62 DAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESLERGLNLSALIDQVAAEKPV 121 Query: 123 RR 124 Sbjct: 122 ED 123 >UniRef50_Q8DVP8 Ribosome-binding factor A n=5 Tax=Lactobacillales RepID=RBFA_STRMU Length = 116 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 2/117 (1%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R +RV E+++E+ ILQ++++DPR+ T++ V+MS DL+ AKVY T ++D D Sbjct: 2 SNHRIERVGMEIKREVNEILQKKVRDPRVQG-VTITDVQMSGDLSLAKVYYTIMSDLASD 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K I L++A G I+ LGK + + +P+LTF D S+ G ++ ++ + K + Sbjct: 61 NQKVQI-GLEKAKGTIKRELGKNLTMYKIPDLTFIKDESIEYGNKIDQMLRDLEKRN 116 >UniRef50_C8NBH2 Ribosome-binding factor A n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBH2_9GAMM Length = 128 Score = 125 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 2/119 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K R +R+ ++M++++A+ + + + P + +++ V ++RDL++AKVYVT + Sbjct: 1 MPKGQDRTRRIGEQMRRDLAVAVPQILDHPH-ASLLSITAVRVTRDLSFAKVYVTHV-IN 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D D + ++AL +G +R L + + +R +PEL F YD+S+ G RM +L+ +VK Sbjct: 59 DADERQTLLRALNAHAGQLRHALAQKLSIRKMPELHFVYDDSVEYGARMDHLLHDLVKD 117 >UniRef50_B4RC51 Ribosome-binding factor A n=2 Tax=Alphaproteobacteria RepID=RBFA_PHEZH Length = 145 Score = 125 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 5/131 (3%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + ++ + I + E I DP L + TV+ V +S DL +A V+V L + Sbjct: 16 SQRQLRAGELVRHALVEIFREEEINDPVLAGVSVTVTEVRVSPDLRHATVFVEPLGGEHA 75 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 D ++AL + F+R LG+A+ LR PEL F +D S E RM+ L + Sbjct: 76 D---EVVQALNRHARFLRGHLGRAIELRFTPELKFLHDESFNEAARMAKLFDDPKVRQDL 132 Query: 123 RRVNPDDSKED 133 P DS +D Sbjct: 133 TPQPPSDSWKD 143 >UniRef50_D1VSB2 Ribosome-binding factor A n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSB2_9FIRM Length = 118 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 78/118 (66%), Gaps = 2/118 (1%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 + R ++++E+++ + I+Q +IKDPR+ +T++S VE++RDL++AKVYV+ D + Sbjct: 2 DNKRINKISEEVKRCLMDIVQNKIKDPRIPTLTSISHVEVTRDLSFAKVYVSIFADDIKK 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + ++ L+ A GFI+ L + ++LR++PEL F D+S+ +G++M L+ V + Sbjct: 62 --QKALQGLESAKGFIKKELAREVKLRVMPELIFINDDSIEKGLKMDKLINEVNHGKK 117 >UniRef50_C7JG37 Ribosome-binding factor A n=8 Tax=Acetobacter pasteurianus RepID=C7JG37_ACEP3 Length = 154 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 5/131 (3%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV +E+++ +A + R +DP L + TV+ V +S D +A V++T L D Sbjct: 27 SQRQLRVGEEVRRVLAEVFARTTFRDPDLVDVDLTVTEVRLSPDFRHATVFITRLGRSD- 85 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 V + AL+ + ++R+ L +R R VPEL F D +L M M L+ S + Sbjct: 86 --VAELLPALKRVAPWLRTQLAHKIRARTVPELHFQPDTALDTAMHMDTLLRSPEVQRDL 143 Query: 123 RRVNPDDSKED 133 + D+ ED Sbjct: 144 NAASEDEESED 154 >UniRef50_B1IA81 Ribosome-binding factor A n=30 Tax=Streptococcus RepID=RBFA_STRPI Length = 116 Score = 125 bits (314), Expect = 6e-28, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 75/119 (63%), Gaps = 3/119 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA F R RV E+++E+ ILQ++++DPR+ T++ V+M DL+ AKVY T L++ Sbjct: 1 MANHF-RTDRVGMEIKREVNEILQKKVRDPRVQG-VTITDVQMLGDLSVAKVYYTILSNL 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 D K I L++A+G I+ LG+ ++L +P+LTF D S+ G ++ ++ ++ K+ Sbjct: 59 ASDNQKVQI-GLEKATGTIKRELGRNLKLYKIPDLTFVKDESIEYGNKIDEMLRNLDKN 116 >UniRef50_D1CFX0 Ribosome-binding factor A n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFX0_THET1 Length = 121 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 82/123 (66%), Gaps = 3/123 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R ++VAQE+++ I+ +L +E++DPR+G TV+ VE+S DL +A ++V+ L ++++ Sbjct: 2 SRRTEQVAQEIKRHISELLVQEVRDPRIG-FVTVTAVEVSPDLEHATIHVSVLGSEEDE- 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K +KAL+ ASGF+RS L K +RLR + EL F D S E +R+S L+ V+ D+ ++ Sbjct: 60 -KETMKALRRASGFLRSELAKRIRLRKMAELRFEPDRSAAEAIRISQLLNEVLPPDDRQK 118 Query: 125 VNP 127 + Sbjct: 119 ESE 121 >UniRef50_UPI0001C31DB9 ribosome-binding factor A n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31DB9 Length = 121 Score = 124 bits (313), Expect = 8e-28, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 71/123 (57%), Gaps = 3/123 (2%) Query: 8 PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 +RV + ++ ++ + +++KDPR+G TV+ V S DL +A+VYV+ L DE+ Sbjct: 1 MRRVDEAVRAVLSDAITQDLKDPRVG-FVTVTAVRTSSDLRHARVYVSVLG--DEETRAE 57 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNP 127 + L+ A+G+++ L+ + +R++ PE+ F YD+S+ GMR++ ++ E + Sbjct: 58 CLAGLRSATGYLQRLVAREVRMKYTPEIVFAYDDSIDRGMRITEILRDAPAPAREDGGDR 117 Query: 128 DDS 130 + Sbjct: 118 EAD 120 >UniRef50_UPI000196CD5A hypothetical protein CATMIT_02506 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CD5A Length = 109 Score = 124 bits (313), Expect = 8e-28, Method: Composition-based stats. Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 8/117 (6%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + ++ + KE++LIL+ E+KDP L M TV+ V S D++ AKVYVTF+ Sbjct: 1 MA--SLKIDKMNHYIMKELSLILRDEVKDPALR-MCTVTSVSCSNDMSVAKVYVTFM--- 54 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 G++AL GFIRS L + +++R PEL F D SL G R+ L+ ++ Sbjct: 55 --KNQGKGLQALDRCKGFIRSQLARRLKIRKCPELIFKVDESLEYGNRIEELIKNLH 109 >UniRef50_Q1LSK9 Ribosome-binding factor A n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=RBFA_BAUCH Length = 134 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 5/127 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA + R +R+A E+QK+I + LQ I+DPRL TT+S V +S DL A V+V F Sbjct: 1 MANVYSRKKRIAHEIQKKINISLQHNIRDPRLRK-TTISWVSVSHDLGSATVFVIFNGIQ 59 Query: 59 --DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 ++ + +K IK LQ ASGFIR LLGK M LRIVP+LTF YD SL G+ + LV + Sbjct: 60 NDNQTSEEIKKRIKTLQAASGFIRYLLGKTMHLRIVPKLTFVYDQSLSHGIYIHELVNKI 119 Query: 117 VKHDEER 123 ++ D + Sbjct: 120 IREDHKS 126 >UniRef50_A1A0A3 Ribosome-binding factor A n=6 Tax=Bifidobacterium RepID=RBFA_BIFAA Length = 167 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA R R+A +Q+ IA ++ ++ D RL T++ V ++ DL AKVY T L Sbjct: 1 MAGTNPRAARIAALIQRVIASSMEAQLHDKRLAN-VTITEVRVTNDLQIAKVYWTQLGHE 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 ++ + +AL +A G +RSL+G LR+ P+L F +D E + +++ K Sbjct: 60 GHEQGERRRAQQALNQAKGRLRSLVGTKAGLRLTPQLEFIFDEVPGEAHEIEDILALAHK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_D1C376 Ribosome-binding factor A n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C376_SPHTD Length = 135 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 3/129 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R ++A ++ EI+ ILQRE+KDPRLG + +++ VE+S DL YAKVYV+ L E+ Sbjct: 3 SRRQVQLADFLRDEISEILQREMKDPRLG-LASITRVELSPDLRYAKVYVSVLGS--EED 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 +A + AL A+GF+R LL MR+R VPE+ F D S+ + + + Sbjct: 60 REATMAALTGAAGFVRHLLKPRMRVRHVPEIRFRLDRSMEHAEVIQRTLRELNLPPSTEA 119 Query: 125 VNPDDSKED 133 + D Sbjct: 120 DADPVPEGD 128 >UniRef50_B6J6B2 Ribosome-binding factor A n=6 Tax=Coxiella burnetii RepID=RBFA_COXB1 Length = 119 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 4/122 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R QRVA + +++A +L++E++D RL +++ V +S DL AKV+ + L + Sbjct: 2 SQRQQRVADLIHQQLAELLKKEVRDSRLSK-ISLTAVSISPDLKQAKVFYSLL---ENQN 57 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K KAL +A+G++R LL +A LR VP+L F YD S+ R+S L+ +K D+ Sbjct: 58 EKEVQKALNKATGYLRHLLAQATVLRYVPKLEFVYDESIERAHRISLLIERALKKDDSDE 117 Query: 125 VN 126 + Sbjct: 118 SS 119 >UniRef50_B9E1K3 Ribosome-binding factor A n=35 Tax=Clostridium RepID=RBFA_CLOK1 Length = 121 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 72/119 (60%), Gaps = 2/119 (1%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ +EM++EI+ I++ ++KDPRL M +V+ V++++D YAKV+V+ ++ + Sbjct: 5 RSGRINEEMKREISNIIRNDMKDPRLSAMVSVTKVDVTKDQKYAKVFVSIYG--EDKSKD 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + L+ + FIR +G ++LR PE+ DN++ GM ++ L+ + ++++ Sbjct: 63 DTFQVLKSSESFIRREVGHRVKLRNTPEIIIEMDNTIEYGMHINELLHKIKENEKHDNE 121 >UniRef50_A6TRK6 Ribosome-binding factor A n=2 Tax=Alkaliphilus RepID=RBFA_ALKMQ Length = 138 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 82/128 (64%), Gaps = 2/128 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 + R R+A+E++K I+ +++ +++DPR+ MT++ V ++RDL +A +Y++ L D+ Sbjct: 6 YPRVNRLAEEIKKIISHMIRNDLRDPRIAKMTSIIEVNVTRDLRFATIYISVLG--DQQE 63 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + I+ L+++SGFIR +G+ + R PEL F D S+ G+ M ++++ V + D + + Sbjct: 64 KEETIEGLKKSSGFIRKEVGRQITARFTPELIFKLDESIERGVYMYDVISKVTQKDMDEK 123 Query: 125 VNPDDSKE 132 N D+ ++ Sbjct: 124 KNSDEKRD 131 >UniRef50_A5FQR5 Ribosome-binding factor A n=5 Tax=Dehalococcoides RepID=RBFA_DEHSB Length = 118 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 2/119 (1%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +++ Q + +I+ +LQ+EI+DPRL + +V+ V++S D+ +A VYV+ L + Sbjct: 2 SRRIKKLNQLFRADISALLQKEIRDPRLDTLLSVNEVDISEDMRHANVYVSHLAGDEHK- 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 + AL A+GF R+ + K +R +P F +D ++ G+R++ L+ V+ H E Sbjct: 61 -DEILAALNAAAGFFRTEIAKKTDIRYMPVFHFVWDITIERGVRLNTLIDQVIHHQPED 118 >UniRef50_B7GNA2 Ribosome-binding factor A n=10 Tax=Bifidobacteriaceae RepID=RBFA_BIFLI Length = 158 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 MA R R+A +Q+ +A ++RE+ D RL TV+ V ++ DL AKVY T L Sbjct: 1 MAGTNPRAARIAALIQRVVASSIERELHDKRLAS-ITVTEVRVTNDLQIAKVYWTQLGHE 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +E K +AL +A G +RSL+G LR+ P+L F +D E + +++ K Sbjct: 60 GHEEGERKRAQQALDQAKGHLRSLVGHKAGLRLTPQLQFVFDEVPGEAHEIEDILAVAKK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_UPI0000E87C6E ribosome-binding factor A n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C6E Length = 111 Score = 123 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R R+ Q+++KE+A +LQ+E+KDP L T+ V++S L +AKV+ Sbjct: 1 MAKDYPRSDRIRQQIKKELANLLQKEVKDPSLNQ-ITILDVDVSPCLKHAKVFFV----S 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 E+A + +K L + F+RS L K M R +P+L F YD S+ E +++S L+ + Sbjct: 56 QEEASEEVMKGLARSMPFLRSQLAKRMTTRGIPKLHFVYDKSIDESIKISKLLDGI 111 >UniRef50_B4E7L2 Ribosome-binding factor A n=21 Tax=Burkholderiales RepID=RBFA_BURCJ Length = 132 Score = 123 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 5/128 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R ++A ++Q++++ ++ RE+KDPR+G + T+ VE++ D A+AKVY T L Sbjct: 9 NRNVQIADQIQRDLSELIMREVKDPRIG-IVTIQSVELTPDYAHAKVYFTALTGDP---- 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 +AL ASG + +LL K + + VP L F YD ++ + + MS L+ + Sbjct: 64 DKTQEALNHASGHLHNLLFKRLHIHTVPTLHFHYDQTIEKAVEMSRLIKEANSTRAKDDD 123 Query: 126 NPDDSKED 133 +D Sbjct: 124 EAGAPAKD 131 >UniRef50_UPI0000E0F5A5 ribosome-binding factor A n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F5A5 Length = 144 Score = 123 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 4/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKD--PRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 MA+EF R RV+Q++ KEIA IL +E K P L M TVSGVE+SRDLA+AKVYVTFL Sbjct: 1 MAREFSRTDRVSQQVHKEIASILNQEFKHQAPEL-CMVTVSGVEISRDLAHAKVYVTFL- 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + DE+ VKA + L+E GF+R LL + +R+R P L F D S+ EGMR+SN+V+ V + Sbjct: 59 EMDEEKVKASMALLEEGKGFVRGLLSRRVRMRNTPALKFIQDRSITEGMRISNIVSQVTR 118 Query: 119 HDEERRVNPD 128 +E +R + Sbjct: 119 DEEAKRGDSP 128 >UniRef50_A6NTY2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTY2_9BACE Length = 129 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 79/135 (58%), Gaps = 8/135 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R R+ +E+Q+E++ +++ +KDPR+ + +++ V+ + DL YAK++V+ L Sbjct: 1 MA--SNRIGRINEEIQRELSGLIRT-VKDPRVHGLVSITAVDTTTDLRYAKIHVSVL--- 54 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT--SVVK 118 D+ V +K L+ A+G++R LG A+ LR PEL F D+S+ +G + +++ VVK Sbjct: 55 DKSDVNEVVKGLKSAAGYLRRELGAALSLRYTPELIFEKDDSMAQGAHILSMLRDPEVVK 114 Query: 119 HDEERRVNPDDSKED 133 + + E+ Sbjct: 115 PANPANTHINLDSEE 129 >UniRef50_B0S1E4 Ribosome-binding factor A n=2 Tax=Finegoldia magna RepID=RBFA_FINM2 Length = 121 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 71/122 (58%), Gaps = 3/122 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R +R++ E++K I+ + +KDPR+ + +V+ V+++ DL++A VY+ + D ++ Sbjct: 2 NIKRVRRISSEIKKVISSSIINSLKDPRIDKLNVSVTEVKVTNDLSFATVYIAVIGDDEK 61 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 K ++ L +A GF++ +G+ + LR VP+L F D + + M + NL+ S+ + + Sbjct: 62 K--KQTLEGLNKAKGFLKKQIGENVDLRHVPQLIFKIDETSEQSMHIENLIKSIHEENHN 119 Query: 123 RR 124 Sbjct: 120 EN 121 >UniRef50_O65693 Probable ribosome-binding factor A, chloroplastic n=10 Tax=Embryophyta RepID=RBFA_ARATH Length = 215 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREI-------------KDPRLGMMTTVSGVEMSRDL 47 MA R + VA+++ +E++ +L + D L +TT+S VE+S DL Sbjct: 54 MANP-RRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDL 112 Query: 48 AYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGM 107 KVYV+ D V I L+ + ++RS LGK M+LR+ PE+ F D ++ G Sbjct: 113 QVVKVYVSVFGDDRGKDV--AIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAMERGS 170 Query: 108 RMSNLVTSVVKHD--EERRVNPDDSKED 133 R+ ++ + E + P DS ED Sbjct: 171 RVIAILDKIKAEKGSGEGKTEPSDSTED 198 >UniRef50_D2MPT2 Ribosome-binding factor A n=7 Tax=Bacteria RepID=D2MPT2_9FIRM Length = 117 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 4/121 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + +R+ ++K I+ I+Q +KDP +G T++ V +S D +YA VYV FL Sbjct: 1 MAN-TIKQKRLEGIIRKNISDIIQFNLKDPDVG-FVTITDVAVSNDHSYAHVYVVFLG-- 56 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 ++ +AG+KAL A GFIR L + + +R PEL F D + G + +++ + + + Sbjct: 57 KKERAQAGLKALNRAKGFIRRELSQRLDIRRTPELIFQMDQAEERGRHIDDIIRKIHEGE 116 Query: 121 E 121 + Sbjct: 117 Q 117 >UniRef50_A3MJW5 Ribosome-binding factor A n=41 Tax=Burkholderiales RepID=RBFA_BURM7 Length = 122 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 8/127 (6%) Query: 1 MAKEF---GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL 57 M+K+ R ++A ++Q++++ ++ RE+KDPR+G + T+ VE++ D A+AKVY T L Sbjct: 1 MSKKRSSPNRNVQIADQIQRDLSELIMREVKDPRIG-IVTIQSVELTPDYAHAKVYFTAL 59 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 D +AL A+G + +LL K + + VP L F YD ++ + + MS L+ Sbjct: 60 TGTPAD----TQEALNHAAGHLHNLLFKRLHIHTVPTLHFHYDQTIEKAVAMSRLIDEAN 115 Query: 118 KHDEERR 124 + Sbjct: 116 ATRAKDD 122 >UniRef50_Q609C1 Ribosome-binding factor A n=1 Tax=Methylococcus capsulatus RepID=RBFA_METCA Length = 119 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 3/119 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M +EF R RV+ +MQ+EIA L+ I P LG M TVS V++SRDLA AKV+VTFL + Sbjct: 1 MPREFSRSDRVSAQMQREIAEFLRTGIDAPELG-MVTVSDVDVSRDLAVAKVFVTFLGAR 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 E +A +K L E + +R +LG+ MR+RI+PE+ F YD+SL G+ M ++ S+ K Sbjct: 60 LE--TRAAVKRLGEFAPQLRQVLGRRMRMRIIPEIRFAYDDSLERGLHMDEVLRSLNKD 116 >UniRef50_A5UZQ3 Ribosome-binding factor A n=5 Tax=Chloroflexaceae RepID=RBFA_ROSS1 Length = 130 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +++ E+Q+ + ++Q E+KDPR+G TV GVE++ DL A+V ++ + DE Sbjct: 2 SKRTEQLGHEIQRILGEVIQYELKDPRVG-FATVVGVEVTADLQIARVRISVMGTPDE-- 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 + + AL+ A GF+R L + + LR VPEL D S+ + + L+ + + Sbjct: 59 RRETMAALERARGFLRRRLAEELNYLRFVPELRLILDTSVDYSLHIDELLRRAAEERADS 118 Query: 124 RVNPDDSK 131 + Sbjct: 119 PPQQPEDD 126 >UniRef50_Q8D2X7 Ribosome-binding factor A n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=RBFA_WIGBR Length = 125 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 54/114 (47%), Positives = 87/114 (76%), Gaps = 1/114 (0%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 ++E R ++++E+Q++IALILQ++I DPR+G ++TVSGV++S D ++AK++VTFLN Sbjct: 3 SRENNRKFKISKEIQRKIALILQQKINDPRIG-ISTVSGVDLSSDFSHAKIFVTFLNKNT 61 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + +K+G+ L +AS FIR +L K MRLRI+P+LTF YD SL++G + +L + Sbjct: 62 KQQIKSGLFILNKASFFIRKILNKTMRLRIIPKLTFIYDYSLIKGRNIDDLFNN 115 >UniRef50_B6IVF9 Ribosome-binding factor A n=1 Tax=Rhodospirillum centenum SW RepID=B6IVF9_RHOCS Length = 178 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 7/132 (5%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV +E++ +A IL+R + +DP L + TV+ V +S DL A +V L Sbjct: 16 SQRQLRVGEEIRHALADILRRGDFRDPGLQDVNVTVTEVRVSPDLKNATAFVMPLGGGHP 75 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VVKHDE 121 + I AL A+ F R+ + A+RL+ P + F D S R+ L+ V D Sbjct: 76 E----VIAALNHAAPFFRAQIAHAVRLQHAPRIGFQEDTSFAYADRIDRLLHDPAVARDI 131 Query: 122 ERRVNPDDSKED 133 R ++ + D Sbjct: 132 TRDLDAEGVPLD 143 >UniRef50_Q3BRP6 Ribosome-binding factor A n=19 Tax=Xanthomonadaceae RepID=RBFA_XANC5 Length = 130 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 81/133 (60%), Gaps = 5/133 (3%) Query: 1 MA-KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K F R RV+ ++++++ I+ ++D L +VS VE+SRDLA+AKV+VT L Sbjct: 1 MPTKSFHRTDRVSAQVRRDLGTIVHAAVRDHGLPS-VSVSDVEISRDLAHAKVFVTAL-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 ++ +K L+E +G +R+ L +AM+LR VPEL F YD+S+ G R+ NL+ + Sbjct: 58 -QQERSAEAVKGLKEIAGQLRTQLARAMKLRHVPELHFHYDDSVDRGERIDNLLRDLDDV 116 Query: 120 DEERRVNPDDSKE 132 E + +D+++ Sbjct: 117 GPEATSSDEDAEQ 129 >UniRef50_D2UCR3 Probable ribosome-binding factor a protein n=1 Tax=Xanthomonas albilineans RepID=D2UCR3_XANAL Length = 136 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 5/133 (3%) Query: 1 MA-KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K F R RVA ++++++ I+ ++D L +VS VE++RD+A+AKV+VT L Sbjct: 1 MPTKSFRRTDRVAAQIRRDLGTIVHAAVRDHGLPS-VSVSDVEVTRDMAHAKVFVTALM- 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + +K L+E + +R+ L +AM+LR VPEL F YD+S+ G R+ L+ + + Sbjct: 59 --PERSSEAVKGLKELAPQLRTELARAMKLRHVPELHFHYDDSVDRGERIDTLLRDMPEL 116 Query: 120 DEERRVNPDDSKE 132 D+ + Sbjct: 117 QSGVEAEGSDATD 129 >UniRef50_C1EAK4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EAK4_9CHLO Length = 252 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 16/138 (11%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIK-------------DPRLGMMTTVSGVEMSRDL 47 MA + R +V Q+M++EI+ ++Q + K D + M TV+ VE+S DL Sbjct: 50 MANQ-RRVAKVQQQMRREISNMMQTDKKLRDMVYPEERMGVDNVMSCMVTVADVEVSGDL 108 Query: 48 AYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGM 107 KV+V+ L DE K I L++ G++R +GK + LR+ P++ F YD+S G Sbjct: 109 QVVKVFVSILG--DERGKKNAINGLKKMEGYVRRNIGKRVSLRLTPDIRFVYDDSFERGQ 166 Query: 108 RMSNLVTSVVKHDEERRV 125 R+S+L+ + E R Sbjct: 167 RVSSLLDELRVEREVREA 184 >UniRef50_Q1Q1G7 Similar to ribosome-binding factor A n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1G7_9BACT Length = 125 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 5/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K R +R+++ +++E++ I+ ++KDPRL TV+ V++S DL KVYV+ L Sbjct: 1 MSK--RRAERLSEFIKQEVSKIILYKVKDPRLS-FITVTEVDISADLKNVKVYVSVLG-- 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E K + L A GFI++ LG +R++ P L F D + R+ ++ V+ Sbjct: 56 NELERKNTMCGLDHAKGFIQTELGSCLRIKYTPHLKFCLDELTEKRNRILKIIDEAVRGS 115 Query: 121 EERRVNPDDS 130 N + Sbjct: 116 SVIEKNGSEE 125 >UniRef50_C5S648 Ribosome-binding factor A n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S648_CHRVI Length = 127 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 +EF R +R+ EM++ +A++++ ++KDPRL TV V ++RDLA+AKVY T ++ Sbjct: 4 REFDRTERIGAEMKRALAVLVRDQVKDPRLAN-ITVHEVRVTRDLAHAKVYFTCFPSDED 62 Query: 63 DAVKAGIKALQEA-SGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + + L + +GF+R L + +RLR +P+L F YD S+ +G +S+L+ V D Sbjct: 63 TPAQERL--LNKQLAGFLRHALAQEVRLRAMPQLHFVYDESIAQGQHLSDLIEQAVAKDR 120 Query: 122 ERRVNP 127 Sbjct: 121 PATEEE 126 >UniRef50_B5YHT9 Ribosome-binding factor A n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RBFA_THEYD Length = 118 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 4/120 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 + + R QR+ +++E+A I+ +IKDPRLG TV+ VE+S DL AKV+++ L +D Sbjct: 2 QPYKRAQRLKVLLKEEVAEIILHKIKDPRLG-FITVTDVELSDDLRIAKVFISVLKTED- 59 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + ++ L +A GF+RS + K +R++I+P F +D S+ G R+ L+ + K EE Sbjct: 60 --RQLTLQILNDAKGFVRSEIAKRLRIKIIPTFEFLFDESIDRGFRIDQLLKEIKKTSEE 117 >UniRef50_Q1DAM4 Ribosome-binding factor A n=3 Tax=Cystobacterineae RepID=RBFA_MYXXD Length = 119 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 4/116 (3%) Query: 6 GRPQRVAQEMQKEIALILQRE-IKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 RP+RV QE+Q I +L R ++DPR+G T++GV++S DL A+V+ + + +E Sbjct: 5 SRPERVGQEIQAAIGDLLTRGMLRDPRIGY-ITITGVKVSPDLRVARVFYSMMG--NEQE 61 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K L+ A GF+R + A+ LR+ PE+ F +D S+ EG ++ L+ V + Sbjct: 62 RADTQKGLEAAKGFVRREVTSAVNLRVSPEIFFSFDESVGEGDKIDRLLREVRNKE 117 >UniRef50_A5EWY8 Ribosome-binding factor A n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RBFA_DICNV Length = 122 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 2/124 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R +R+ ++M++++A L + P + + + V ++RDL++AKVYVT + D Sbjct: 1 MAHGVDRTRRIGEQMRRDLAQALVDIVHHPH-ASLLSFTAVHLTRDLSFAKVYVTHVLDN 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E+ + L +G R L K + +R VPEL F+YD S+ G RM L+T +VK Sbjct: 60 EEERS-ELVAELNAKAGQFRHYLAKNLSIRKVPELQFYYDQSVEYGARMEQLLTHLVKDS 118 Query: 121 EERR 124 E + Sbjct: 119 EHKD 122 >UniRef50_A8ZZ63 Ribosome-binding factor A n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RBFA_DESOH Length = 129 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 3/131 (2%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K F R R+ +Q+ ++ IL++ + DPRL M T++GV++SRDL A VY D Sbjct: 2 KSFPRADRIGSSIQRGVSEILRKGLGDPRLD-MATITGVKVSRDLGVAYVYYVIPGDTAG 60 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A A + A GFI+ L ++++ +P++ F YD S G + ++ + ++ Sbjct: 61 RAAAAA--GFKSAEGFIKRSLAGMLKMKYMPDIRFRYDESFAYGQSIDTVLRELQTEKDD 118 Query: 123 RRVNPDDSKED 133 + ++D Sbjct: 119 VPDSGRPPEDD 129 >UniRef50_C4FWY3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWY3_9FIRM Length = 119 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 4/123 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R RV QE+ +E+ IL RE KDPR+ T++ V+++ DL A ++ + L+DK Sbjct: 1 MAN--YRVGRVRQEIMREVNRILLREAKDPRIEG-VTITDVDLTGDLQQATIFYSTLSDK 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K L+ +G +RS LGK ++L PE+ F D S+ G R+ L+ + + D Sbjct: 58 AGQRQK-TEAGLKAVTGLVRSELGKVLKLYKTPEIRFERDRSVDYGNRIDQLLNQIHQKD 116 Query: 121 EER 123 + Sbjct: 117 QAE 119 >UniRef50_Q0AK66 Ribosome-binding factor A n=2 Tax=Hyphomonadaceae RepID=RBFA_MARMM Length = 141 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 6/132 (4%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + ++ + I+ RE +DP L G M +V+ V S DL AKVYV L D Sbjct: 13 SQRQLRAGELVRHALVGIIAREEFRDPDLEGQMISVTEVRPSPDLRVAKVYVAPLGRGDS 72 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VVKHDE 121 + L + F+R LG+ + ++ PEL F DNS + +L+ V+ D Sbjct: 73 AKLA---AGLNRCAAFLRGRLGREIEMKFTPELHFHADNSFDTASHVDDLLNRPTVRKDL 129 Query: 122 ERRVNPDDSKED 133 + + ED Sbjct: 130 DATRGSEADAED 141 >UniRef50_Q0RDS6 Ribosome-binding factor A n=44 Tax=Actinomycetales RepID=RBFA_FRAAA Length = 203 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 7/131 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++A +++ +A L+R +KDPRLG M TV+ V ++ DL A V+ T DEDA + Sbjct: 6 RARKLAVRIREVVASALERGVKDPRLG-MVTVTEVRVTPDLVDATVFYTVYG--DEDARR 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD----EE 122 A +AL+ A G +RS +G+A +++ P LTF +D + + +L++ + D E Sbjct: 63 ASAEALESARGLLRSQVGRATGVKVTPTLTFVHDRLPDDAKHLEDLISVARERDARLAEV 122 Query: 123 RRVNPDDSKED 133 RR ED Sbjct: 123 RRDARPAGDED 133 >UniRef50_C8NZL4 Ribosome-binding factor A n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZL4_ERYRH Length = 111 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 67/112 (59%), Gaps = 4/112 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + +R+ +++E+A ++Q + DP L +++ V+++ D ++A +YV+FL D + + Sbjct: 4 KKERIESIIKRELAPVIQNRLNDPSLK-FVSITEVDVTNDFSFATIYVSFLEDSKK---Q 59 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 G+ AL +A G +RS + KA+ +R PEL F D S G ++ ++ S+ K Sbjct: 60 PGMDALNKAKGMLRSEVSKALSIRRTPELIFKLDESSEYGAKIDGILESLKK 111 >UniRef50_C7H6A6 Ribosome-binding factor A n=3 Tax=Ruminococcaceae RepID=C7H6A6_9FIRM Length = 136 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 4/125 (3%) Query: 10 RVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 R+AQ+M++E+ I+ R +KDPRL G + TV+ ++++ DL AKVYV+ + ED K Sbjct: 15 RLAQDMKREVIAIIGR-LKDPRLEGGLLTVTRLDVTPDLDVAKVYVSVMG--REDGPKPA 71 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPD 128 I+AL A+G +R+ + K M +R P F D+ ++ L+ ++ + + + Sbjct: 72 IEALNRAAGHVRTEVSKKMHIRKAPRFIFVEDDGAAYAAHINELLRTLNVNGDAEETSQP 131 Query: 129 DSKED 133 + E+ Sbjct: 132 EETEE 136 >UniRef50_Q46HR0 Ribosome-binding factor A n=2 Tax=Prochlorococcus marinus RepID=RBFA_PROMT Length = 123 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 71/125 (56%), Gaps = 4/125 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLND 59 MA R +++A +++E++ +L I+D R+ M T++ VE+S DL +AK++++ Sbjct: 1 MAN-SRRVEKLAALLKREVSELLVNGIRDERIHQAMITITSVEVSGDLQHAKIFISLFG- 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 +E + L+EA GFIR+ L + +++R PEL F D + +G + +L+ ++ Sbjct: 59 -EEKKKDEVLVGLEEAKGFIRAELAQRLQMRRSPELVFKIDKGMTKGPAVLDLLNALELE 117 Query: 120 DEERR 124 + + Sbjct: 118 RKSKD 122 >UniRef50_P59411 Ribosome-binding factor A n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RBFA_BUCBP Length = 119 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 47/117 (40%), Positives = 78/117 (66%), Gaps = 3/117 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K R +++ E++K+I+ I+ ++ DPRL ++ +VS V +SRD +YAK+YV+ LN+ Sbjct: 1 MQK-LNRSFKISNEIKKKISWIICYQLCDPRLFNILISVSSVNLSRDFSYAKIYVSILNN 59 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 K+ + K + LQ +S IR LL K + LRI+P L F +D+S V G +++NL+ +V Sbjct: 60 KN-ISFKEILTILQNSSKHIRYLLAKGIFLRIIPTLHFCHDSSYVNGTKITNLINNV 115 >UniRef50_C5NYH6 Ribosome-binding factor A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYH6_9BACL Length = 119 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 3/118 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+A++++KEI +L ++K+ LG TV+ V ++ D + AKV+ T L + E + Sbjct: 5 RVNRLAEQIKKEITYVLATKVKNHDLG-FVTVTEVALTGDYSQAKVFYTVLGGEREK--E 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 +A ++ GF++S + K +++R PEL F YD + + + +L+ SV K + Sbjct: 62 KTKEAFKKIKGFVKSEVAKKIKIRKFPELIFQYDTTAEYALHIESLIASVSKKENNEE 119 >UniRef50_A0Q8F2 Ribosome-binding factor A n=18 Tax=Francisella RepID=RBFA_FRATN Length = 143 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%), Gaps = 5/133 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA E GR QRVA E+QK I+L+L+ IKD +L T++ V++S+DL+YAK+Y T L + Sbjct: 1 MAAE-GRVQRVASELQKVISLLLRTRIKDAKLAS-ATITEVDLSKDLSYAKIYYTCLAIE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D + + KA +++ GF RS + K++ LRIVP L F YD SL GM+M + ++ D Sbjct: 59 DAEYID---KAFEKSKGFFRSSIAKSLSLRIVPNLKFIYDTSLDYGMQMEEKIQQALEAD 115 Query: 121 EERRVNPDDSKED 133 + D S ++ Sbjct: 116 SKIIKQDDKSLQE 128 >UniRef50_A3UIH6 Ribosome-binding factor A n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UIH6_9RHOB Length = 140 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 5/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLN 58 M + R R + +++ ++ I++ + DP + T++ +S DL +A VYV L Sbjct: 14 MKAQSQRQLRAGELVRRAVSDIIREGRVHDPHVNTAAVTITEARVSPDLRHATVYVDLLG 73 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D +A AL A+GFI+ LG+ + L+ P+L F D+ + + + L+ Sbjct: 74 GGD---REAVATALNHAAGFIQRELGRQIELKFTPKLRFAVDDRIDDVREVDALLDRPSV 130 Query: 119 HDEERRVNPD 128 + + D Sbjct: 131 KRDLEDGDED 140 >UniRef50_D0MI92 Ribosome-binding factor A n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI92_RHOM4 Length = 126 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 5/113 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R QRV +++E+A ILQ E D +L MTTV+ V+ +RDL+ AKVYV+ ++ Sbjct: 3 SSIRVQRVGSLLKRELADILQFEFGD-QLPPMTTVTDVQPTRDLSIAKVYVSIYGTPEQK 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVT 114 A + LQE + IR+ L + +R LR +PEL F D +L R+ L+ Sbjct: 62 R--AAFRRLQELTPQIRAALAQRIRYQLRFMPELRFVLDETLERAQRVEELLA 112 >UniRef50_A6W7Z4 Ribosome-binding factor A n=14 Tax=Actinobacteria (class) RepID=RBFA_KINRD Length = 171 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA R +++A ++ +A L++ +KDPRLG T++ ++ DL +A ++ T Sbjct: 1 MADPT-RARKLADRIKVIVADALEKRVKDPRLG-FVTITDARVTNDLQHATLFYTVFGSD 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +E A AL+ A G +RS +GK +R+ P LTF D ++ +L+ + D Sbjct: 59 EEKQGTAL--ALESAKGVLRSEVGKRTGIRLTPTLTFTLDEVPETATQIQDLLKQAAEQD 116 >UniRef50_A5ZAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAJ4_9FIRM Length = 92 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 2/94 (2%) Query: 35 MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPE 94 MT+V+GVE++ DL + KVY++ L DE+A + L+ A+GFIR L + + LR PE Sbjct: 1 MTSVTGVEVTPDLKFCKVYISVLG--DEEAKADTMAGLKSAAGFIRRELARTVNLRNTPE 58 Query: 95 LTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPD 128 L F D S+ GM+MS L+ V +++E + + Sbjct: 59 LKFVMDQSIEYGMKMSKLIDEVNGNNKEESEDNE 92 >UniRef50_A0NUK1 Ribosome-binding factor A n=3 Tax=Rhodobacteraceae RepID=A0NUK1_9RHOB Length = 170 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 8/129 (6%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV + ++KE++ IL R DP L G++ T+ V M+ DL A V L + Sbjct: 42 SQRQLRVGETVRKELSDILTRGRFSDPDLDGVIVTIPEVRMTPDLRLATCLVMPLGGVNA 101 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + V+ KAL ++ ++R + + + ++ +P+L F D + R+ L+ S + Sbjct: 102 ENVE---KALNRSAKYLRGQVSRRLTMKYMPDLRFVLDTRFDDDDRIGTLLHS---PEVS 155 Query: 123 RRVNPDDSK 131 R ++ D+ Sbjct: 156 RDLDEDEGD 164 >UniRef50_B8EIA6 Ribosome-binding factor A n=7 Tax=Rhizobiales RepID=RBFA_METSB Length = 155 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 + R RVA+ ++ ++ +L R +I DP L G + TV V MS DL A VYV L Sbjct: 11 QPSQRMLRVAELVRHAMSELLTRSDINDPALEGKVITVPDVRMSPDLKLATVYVMPLGG- 69 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + V + AL +R + + + LR P++ F D ++ L++S Sbjct: 70 --ENVTEVLAALDRHKKLLRGEIARRVSLRFAPDVRFKADPGFEYSGKIDALLSSPKVKQ 127 Query: 121 EERRVN 126 + + Sbjct: 128 DLEVQD 133 >UniRef50_Q0AYI7 Ribosome-binding factor A n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RBFA_SYNWW Length = 122 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 78/126 (61%), Gaps = 5/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLND 59 M+K R +R++ E+ + ++ I+Q EIKDPR+ +++ +++S D ++A+V ++ L Sbjct: 1 MSK--RRQERMSVEIMRVLSQIIQEEIKDPRIEFKNLSITRIDLSNDYSHARVNISILG- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 DE + +KALQ+A G+IRS L + +++R PEL F D S+ G+R+S+L+ + + Sbjct: 58 -DEIQREEAMKALQKAKGYIRSALAQQLKVRHAPELEFRLDRSIEHGIRISSLLEEIKEE 116 Query: 120 DEERRV 125 + Sbjct: 117 AKGSNE 122 >UniRef50_C6W5Y8 Ribosome-binding factor A n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5Y8_DYAFD Length = 127 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 5/127 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+V +++QK++ I Q++ + G T++ V ++ DL+ A+ Y++FL DK++ Sbjct: 2 ESKRQQKVGRQIQKDLGEIFQKDAQHLTHGSFVTITAVRVTPDLSIARAYLSFLPDKNKT 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + ++ ++E + FIR L + +R LRIVP L F+ D++ +M L +V Sbjct: 62 ML---LETIRENTRFIRQKLAERVRHQLRIVPHLQFYIDDTAEYAAKMDQLFADLVIPPA 118 Query: 122 ERRVNPD 128 + D Sbjct: 119 QPDEEED 125 >UniRef50_B0TQA1 Ribosome-binding factor A n=43 Tax=Gammaproteobacteria RepID=RBFA_SHEHH Length = 142 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 70/132 (53%), Positives = 101/132 (76%), Gaps = 2/132 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKEF R +R+AQ++Q+E+A +LQR++KDPR+G TV+ V++SRDL+YAKVYVTF ++ Sbjct: 1 MAKEFSRTRRIAQQLQQELAQVLQRDMKDPRIG-FVTVNDVDVSRDLSYAKVYVTFF-EE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 DE V+ + AL A+G+IRSL+ M+LR++PEL F YD+SLVEGMRMSNLV+ V+ +D Sbjct: 59 DEKLVEQKVAALDAAAGYIRSLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVSRVISND 118 Query: 121 EERRVNPDDSKE 132 E ++ + Sbjct: 119 EAKQKQHGVETD 130 >UniRef50_Q2J730 Ribosome-binding factor A n=14 Tax=Actinomycetales RepID=RBFA_FRASC Length = 168 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 7/131 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+A +++ +A L+R +KDPRLG M TV+ V ++ DL A V+ T DE A + Sbjct: 6 RARRLAVRIREVVASTLERGVKDPRLG-MVTVTDVRLTPDLVDATVFYTVYG--DETARQ 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD----EE 122 A +AL+ A G +RS +G+A +++ P LTF +D + + L++ + D E Sbjct: 63 ASAQALESARGLLRSQVGRATGVKVTPTLTFVHDRLPDDAQHLEKLISVARERDAYLAEV 122 Query: 123 RRVNPDDSKED 133 RR +D Sbjct: 123 RRDARPAGDDD 133 >UniRef50_A1TSK2 Ribosome-binding factor A n=15 Tax=Burkholderiales RepID=RBFA_ACIAC Length = 125 Score = 115 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 6/121 (4%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +VA ++Q+++ ++ RE+KDPR+G M T+ VE++ D A+AKV+ + L Sbjct: 10 NRGFKVADQIQRDLTELI-RELKDPRIG-MVTLQAVEVTPDYAHAKVFFSVLVGD----A 63 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 A AL +A+GF+R+ L K + + VP L F +D + M+ L+ V + Sbjct: 64 DATQDALNQAAGFLRNGLFKRLHIHTVPTLHFMFDRTTERASDMNALIARAVASRSKDDD 123 Query: 126 N 126 Sbjct: 124 E 124 >UniRef50_A3D7K5 Ribosome-binding factor A n=20 Tax=Gammaproteobacteria RepID=RBFA_SHEB5 Length = 152 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 69/136 (50%), Positives = 103/136 (75%), Gaps = 5/136 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAKEF R +R+AQ++Q+E+A +LQR++KDPR+G TV+ V++SRDL+YAKV+VTF ++ Sbjct: 1 MAKEFSRTRRIAQQLQQELAQVLQRDMKDPRIG-FVTVNDVDVSRDLSYAKVFVTFF-EE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D+ V+ + AL A+ +IR+L+ M+LR++PEL F YD+SLVEGMRMSNLV+ V+ D Sbjct: 59 DKAVVQEKLNALISAAPYIRTLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVSQVINQD 118 Query: 121 EERRV---NPDDSKED 133 + ++ + D S ED Sbjct: 119 KAKQQQFGSEDASVED 134 >UniRef50_D1Y7J4 Ribosome-binding factor A n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7J4_9BACT Length = 131 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 7/134 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + R R+ ++Q+EI+LIL RE++D +L + V+ VE S+DL YAKVY T L Sbjct: 1 MPR--FRMGRINSQLQREISLILSREVRDEKLAEVI-VTSVECSKDLKYAKVYYTTL--- 54 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH- 119 E+ K L++ SG++RS LG+ + R VPELTF +D+S M ++ + Sbjct: 55 REEGRAEIAKLLEKVSGYVRSSLGRVLSYRTVPELTFRFDDSEELAREMDRVLDRISAEL 114 Query: 120 DEERRVNPDDSKED 133 E +D+ E+ Sbjct: 115 PPEESEAAEDAPEE 128 >UniRef50_C9M6R1 Ribosome-binding factor A n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R1_9BACT Length = 130 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 7/129 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+ ++ +EI+ IL ++KD V+ V+ S+DL YAKVY T L K Sbjct: 5 RMDRINSQLMREISRILMSDVKDEVASQAI-VTSVDCSKDLKYAKVYYTALT----ARRK 59 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK--HDEERR 124 + +AL++ +GF+R LG +R R VP LTF +D + + +M L+ VV E Sbjct: 60 SLAEALEKVAGFVRKTLGSRLRYRTVPLLTFVFDETEEKARQMDTLLDQVVTDLPPEPEA 119 Query: 125 VNPDDSKED 133 PD S + Sbjct: 120 EAPDGSNGE 128 >UniRef50_A6GK84 Ribosome-binding factor A n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GK84_9DELT Length = 153 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 5/116 (4%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMM--TTVSGVEMSRDLAYAKVYVTFLNDKD 61 R QRV + +++E+A +L R E++DPRL +V+GV +S DL+ A +YV L + Sbjct: 2 SRRRQRVEELLRREMAQMLLRGELRDPRLQPASAVSVTGVSVSPDLSVATIYVDVL--TE 59 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 +++ + AL+ G IR LG+ ++LR PEL F +D+S+ G R+ ++T + Sbjct: 60 ALRLESVLAALRAGGGAIRRKLGERVQLRRTPELRFHHDDSIERGNRVEAILTELR 115 >UniRef50_D2QJ35 Ribosome-binding factor A n=2 Tax=Flexibacteraceae RepID=D2QJ35_9SPHI Length = 126 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 5/128 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+V++++QK+++ I QR++ G TV+ V +S DL+ A+VY++FL K++ Sbjct: 2 ESKRQQKVSRQLQKDLSEIFQRDVPHLFNGAFITVTSVRISPDLSVARVYLSFLATKNKQ 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + ++ +QE +R LG +R LRIVPEL FF D++ +M L + + Sbjct: 62 LL---LETIQEKGKVLRQHLGDRVRHQLRIVPELHFFLDDTADYADKMDKLFSGLDIPPA 118 Query: 122 ERRVNPDD 129 D+ Sbjct: 119 PAEDEDDE 126 >UniRef50_A7IC07 Ribosome-binding factor A n=35 Tax=Rhizobiales RepID=RBFA_XANP2 Length = 151 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV + ++ +A +LQR + DP L + TV V MS DL A YV L KD Sbjct: 12 SQRMLRVGELVRHALADVLQRGSVTDPVLAAHIITVPEVRMSPDLKIATCYVMPLGGKD- 70 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + IKAL + ++R +G+ M L+ VPEL F D S EG RM L+ S Sbjct: 71 --ITPVIKALAANARYLRLEVGRRMELKSVPELRFREDTSFDEGARMDALLRS 121 >UniRef50_Q7URR1 Ribosome-binding factor A n=2 Tax=Planctomycetaceae RepID=RBFA_RHOBA Length = 137 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 5/132 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R + A+ +++ +A + E++DPR+ TV GVE+S D+ AKV V+ + D+ + Sbjct: 2 SSRRLLKAAEAIREVVANAIVTEVRDPRVRD-VTVIGVEVSPDMREAKVKVSVMGDETQK 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE-- 121 + ++ LQ ++GF++S + M R P+L F D M +S ++ + + E Sbjct: 61 NL--SLRGLQNSAGFLQSKIANRMDTRYTPKLRFEVDRGQENAMTVSEILARIQQEKEGA 118 Query: 122 ERRVNPDDSKED 133 + +DS ED Sbjct: 119 TDDRDQNDSGED 130 >UniRef50_Q6AJY5 Ribosome-binding factor A n=1 Tax=Desulfotalea psychrophila RepID=RBFA_DESPS Length = 140 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 3/123 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R RVA ++KE+A++L +I+DP+L +S V + DL K+Y T Sbjct: 20 EVKRSTRVADAIRKELAVLLLEKIRDPKLQD-VGISRVTATDDLTIVKIYYTIYGPH--K 76 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 VKA KA A+GFIRS L + + +R P L F YD + + + N+ + K ++ Sbjct: 77 HVKAVDKAFLAATGFIRSHLARTLNMRYTPNLQFCYDKTAEKVAEIENIFQEIAKERQDN 136 Query: 124 RVN 126 N Sbjct: 137 GEN 139 >UniRef50_B8DW44 Ribosome-binding factor A n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DW44_BIFA0 Length = 217 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 3/124 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 M R R+A +Q+ IA ++ + D RL T++ V+++ DL AK+Y T L+ Sbjct: 1 MQGTNSRAARIAALIQRVIASNMESTLHDKRLKN-VTITDVKVTNDLQLAKIYWTTLSRD 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +E K +AL +A G +R+++G LR+ P+L F +D E + ++++ K Sbjct: 60 GHEEGERKRAKEALNQAKGRLRTMVGAKAGLRLTPQLQFIFDEVPGEAHEIEDILSLARK 119 Query: 119 HDEE 122 DEE Sbjct: 120 RDEE 123 >UniRef50_UPI00016C38FF probable ribosome-binding factor A n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38FF Length = 163 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 67/129 (51%), Gaps = 3/129 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 + R RV++ +++ A + EIKDPR+ TV+ E+S DL +AKV+V+ + + E Sbjct: 2 KSHRLARVSEVVRETAANAILFEIKDPRVKN-VTVTRAEVSADLQHAKVFVSVMGSEKEQ 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 ++ + L+ A+ ++++ + + R VP +TF D + + + ++ ++ + E Sbjct: 61 SL--TMHGLKSAAAYVQTKIADRLTSRYVPHVTFILDEGVKKSIEIARIIREENERLEAD 118 Query: 124 RVNPDDSKE 132 R E Sbjct: 119 RGAAQTPPE 127 >UniRef50_Q6MMS5 Ribosome-binding factor A n=1 Tax=Bdellovibrio bacteriovorus RepID=RBFA_BDEBA Length = 134 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 3/128 (2%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R RV +E+Q IA L R K P L + TV+ V+M DL AKVYV+ L DE Sbjct: 8 RRIARVEREIQATIAQFLIRGFKTP-LPGLVTVASVKMPADLRAAKVYVSILG--DEKQQ 64 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + LQE + I++ +GK +++R P+LTF+ D++ + +++ ++ + + Sbjct: 65 DEALDLLQERAFEIQNYIGKELKMRYCPKLTFYLDHATEQVLKVEKILHELELERKANNP 124 Query: 126 NPDDSKED 133 + D Sbjct: 125 GEGSDESD 132 >UniRef50_D1BAC0 Ribosome-binding factor A n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1BAC0_THEAS Length = 137 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ +E +EI+L+LQ +KD R M ++GV S+DL+ AKVY T L D V+ Sbjct: 5 RIERLNKEFLREISLLLQGRVKDDR-AKMAILTGVSCSKDLSVAKVYFTVL---DRSKVE 60 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK------HD 120 L+ ASG IR +LG+ MRLR +PE F YD++ R+ ++ S+ D Sbjct: 61 EVRLGLEGASGLIRGMLGREMRLRKIPEFRFIYDDTEDRAGRVDAILDSIAPTPAMGNQD 120 Query: 121 EERRVNPDDSKED 133 + ++ D +E+ Sbjct: 121 DIEELDEDWQEEE 133 >UniRef50_Q5NQ28 Ribosome-binding factor A n=3 Tax=Zymomonas mobilis RepID=RBFA_ZYMMO Length = 141 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIK-DPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 RP RV ++++ +A +L R EI D + ++S V M+ DL A V+V L + Sbjct: 11 SIRPLRVGEQIRHVLAEMLMRGEIHGDTLDNLFVSISEVRMTPDLRIATVFVKSLGGASD 70 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 D I L + + F+++ + K +RL+ VP+L F D S +G R+ +L+ S + Sbjct: 71 DT---VIGILSKNASFLQAAIAKKIRLKYVPKLRFLADESFEQGSRIDSLLRS---PHVQ 124 Query: 123 RRVNPDDSKED 133 R + +D +ED Sbjct: 125 RDLQENDDQED 135 >UniRef50_C6XX51 Ribosome-binding factor A n=4 Tax=Sphingobacteriaceae RepID=C6XX51_PEDHD Length = 127 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 5/129 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+ A +Q+E+A I QRE + T++ V +S DLA AKVY++FLN + Sbjct: 2 ESKRQQKFAGVIQEELAAIFQREGSAYLPNTLVTITKVRVSPDLAVAKVYLSFLNTSN-- 59 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + + SG IR LG +R R+VP LTFF D++ +M L + + E Sbjct: 60 -TTLSVAEVNSHSGEIRYKLGARIRHQARVVPTLTFFVDDTNTYVEQMDKLFDKISRDRE 118 Query: 122 ERRVNPDDS 130 E + Sbjct: 119 ESGAREESE 127 >UniRef50_A5FV22 Ribosome-binding factor A n=4 Tax=Acetobacteraceae RepID=RBFA_ACICJ Length = 140 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 5/126 (3%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R +RVA++++ +A + R E +DP L + TV+ V MS DL +A V+V+ L D Sbjct: 18 SQRQRRVAEDLRHRLAELFARTEFRDPELAGVHITVAEVRMSPDLKHATVFVSRLGATD- 76 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + + AL+ + F+R +G +R++ VP+L F D++L E R++ L+ + Sbjct: 77 --IDRYLPALKRIAPFLRGEIGHGLRMKFVPDLHFQPDHALDEATRINELLHRPEVMRDL 134 Query: 123 RRVNPD 128 + + + Sbjct: 135 LKPDEE 140 >UniRef50_A4QEZ1 Ribosome-binding factor A n=8 Tax=Actinomycetales RepID=RBFA_CORGB Length = 149 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND- 59 MA + R R+A+ +Q +A ++R+IKD RL T++ V M+ DL AKV+ T Sbjct: 1 MA-DNARAARMAKRIQTIVASAIERDIKDRRLE-FVTITDVTMTGDLHDAKVFYTVRGAS 58 Query: 60 -KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 ++E ++A +AL A G +R ++G+ + +R P LT+ D M L+ K Sbjct: 59 IEEEPDLEAAAEALHRARGQLRKIVGQQLGVRFTPTLTYSIDTVPEASAHMEALLDRARK 118 Query: 119 HDEE 122 DEE Sbjct: 119 RDEE 122 >UniRef50_A8TZ00 Ribosome-binding factor A n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ00_9PROT Length = 130 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 6/127 (4%) Query: 10 RVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 RV +E+++ +A IL+R + DP L T+S V +S DL A V++T L D + Sbjct: 2 RVGEEIRRTLARILERGTLHDPALYHAPVTISEVTVSPDLRNATVWITRLGGGDATDL-- 59 Query: 68 GIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-VVKHDEERRVN 126 + AL+ +G + LL + ++L+ P L F D++ R+ L+ + VV++D E Sbjct: 60 -LAALKRNAGRLGGLLARDIKLKYAPRLQFARDSAFDTSSRIDALLRNPVVRNDIEAEPA 118 Query: 127 PDDSKED 133 D E+ Sbjct: 119 EDADPEE 125 >UniRef50_C8WI33 Ribosome-binding factor A n=3 Tax=Coriobacteriaceae RepID=C8WI33_EGGLE Length = 145 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ ++V ++ ++ IA IL EI DPRL + T++G E+S D + V+ T + Sbjct: 2 KQSSSNRKVNEQAREVIAGILLFEISDPRLE-LVTITGCEVSYDRSVCNVFYT----TEP 56 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 D + A Q+ASG IRSL+ + + RI PEL F D S+ E R+++ + ++ Sbjct: 57 DRYEDVAAAFQKASGRIRSLMARKLSWRIAPELRFLLDKSVDEAERIASALERDAARNKV 116 Query: 123 RRVNPDDSKED 133 D D Sbjct: 117 AAPTDSDVPAD 127 >UniRef50_B3QUN3 Ribosome-binding factor A n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RBFA_CHLT3 Length = 125 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 7/128 (5%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +RVA+ +Q+E++ I ++E+ PR G++TT+ GV+++ DL+ A+VYV+ L ++ Sbjct: 2 SIRTERVAELIQRELSGIFEKEL--PRSGVLTTIVGVKITPDLSIARVYVSILGS--KEM 57 Query: 65 VKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + + +Q+ + R LL +R + +P L F+ D+ + ++ L+ Sbjct: 58 GASVMAHIQKENKHFRKLLSSKIRHQFKRMPSLEFYQDDLFDQAAHINELIRKAN-EASS 116 Query: 123 RRVNPDDS 130 PDD Sbjct: 117 PTPKPDDE 124 >UniRef50_D0WDY7 Ribosome-binding factor A n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WDY7_9ACTN Length = 158 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 9/129 (6%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ ++ ++ ++ +A IL E+ DPRL + T++G E+S D +Y V+ T D Sbjct: 2 KQSNANRKTNEQAREILANILLFEVSDPRLR-LVTITGCEVSYDRSYCNVFYT----SDP 56 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + A G IRSL+G + R+ PEL F D S+ E R+ + H+ Sbjct: 57 GTYEEAAAGFSAARGRIRSLMGARLTWRVTPELRFLLDPSVDEAERI----ARALAHEAS 112 Query: 123 RRVNPDDSK 131 R P +++ Sbjct: 113 RIPVPSETE 121 >UniRef50_C0EAK4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EAK4_9CLOT Length = 115 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 70/114 (61%), Gaps = 4/114 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 + R+A+++++E++ +L R++KDPR+ G M + VE++ D ++AKVYV+ + + +A Sbjct: 5 KVARLAEDIKRELS-VLVRDLKDPRIKGKMLSFVRVEVTNDQSFAKVYVSSM--EGMEAA 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K ++ L+ ASGF++ L + +R P++ F D+S+ ++ L+ + Sbjct: 62 KEAVEGLKSASGFVKRELSNTLHMRKCPDIKFIPDDSIEYSAHLNKLLLDIETE 115 >UniRef50_B9XFC2 Ribosome-binding factor A n=1 Tax=bacterium Ellin514 RepID=B9XFC2_9BACT Length = 125 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 5/130 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M R QRV + +++EI +++REI + TV+ V +S DL A V++ L Sbjct: 1 MP--SLRLQRVRELLKREIGEVIRREIPVGE-SGLITVNEVGVSSDLHSATVFIGILGTD 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + K G L I+ L+G+A+ L+ P L F D S+ EG ++ ++ + K Sbjct: 58 QQK--KKGFAQLNHHRKRIQGLVGQAVILKYTPTLRFVLDESIAEGNKVLQIIDELEKSG 115 Query: 121 EERRVNPDDS 130 P++ Sbjct: 116 PNNETTPENH 125 >UniRef50_B6BVJ9 Ribosome-binding factor A n=1 Tax=beta proteobacterium KB13 RepID=B6BVJ9_9PROT Length = 113 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 6/119 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MAK++ R ++ Q+++KEIA ILQ EI+ P L + T++ +E+S+DL +AK+Y Sbjct: 1 MAKDYPRSNQIGQQIKKEIAEILQYEIQHPTL-VNVTITDLELSKDLRHAKIYF-----I 54 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + KAL+ + FIR L K M R +P L F YD+S+ R++ L++S K Sbjct: 55 SKQDQIELEKALKRSMSFIRQSLSKRMTTRGIPNLEFIYDHSIDHNDRITELLSSAFKK 113 >UniRef50_B0MY67 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY67_9BACT Length = 114 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 5/114 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q++A+++Q+++A I Q+E + G++ TV+ V +S D +YAK+YV+ + Sbjct: 2 ETTRQQKIAKQIQRDMAEIFQKEGAEIVRGVLVTVTAVRVSPDFSYAKIYVSVFPFEQN- 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTS 115 A + L++ + F+R LG+ +R L+ VPE+ FF D+SL ++ + Sbjct: 61 --AAVMATLEQHNWFLRRALGQRIRNQLKTVPEIQFFLDDSLEYIEQIDRAMHR 112 >UniRef50_D0WR20 Ribosome-binding factor A n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WR20_9ACTO Length = 179 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M R RVA+ + + +A ++ +KDPRL + TV+ V ++ DL +A V+ T Sbjct: 1 MPN--PRANRVAERIHEIVASLVTNRLKDPRLE-LVTVTDVRVTGDLQHATVFYTAYG-- 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D+ ++ +AL A G IRS +G+ + LR+ P + F D + + + + D Sbjct: 56 DQRKLRDAGRALNRAKGNIRSHVGRQLGLRLTPTIEFTADALPETARSLEDALAAARHRD 115 Query: 121 EERRVNPD 128 E + + Sbjct: 116 AEIAKSAE 123 >UniRef50_B2S9F7 Ribosome-binding factor A n=38 Tax=Rhizobiales RepID=RBFA_BRUA1 Length = 150 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 6/114 (5%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV ++++ +A +LQR EI+D + + +VS V MS DL A ++T L D Sbjct: 14 SQRQLRVGEQVRHALAQVLQRGEIRDDLIERTVISVSEVRMSPDLKIATCFITPLGSADP 73 Query: 63 DAVKAGIKALQEASGFIRSLLGKAM-RLRIVPELTFFYDNSLVEGMRMSNLVTS 115 +A IKAL + FIR + ++ +++ +PE F D S ++ L+ S Sbjct: 74 ---QAVIKALASHAKFIRGRVAPSLAQMKYMPEFRFRPDTSFDNFSKIDALLRS 124 >UniRef50_B8ZRT3 Ribosome-binding factor A n=7 Tax=Actinomycetales RepID=RBFA_MYCLB Length = 164 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 4/115 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND- 59 MA + R +R+A+ + +A ++ EIKDP L T+ V+++ DL A V+ T + Sbjct: 1 MADQ-ARARRLAKRICTIVASAIEFEIKDPGLDG-VTIVDVKVTADLHDATVFYTVMGRT 58 Query: 60 -KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 +D A AL A G +RS +G +R P LTF D + RM L+ Sbjct: 59 LEDAPDYTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRDTTSDSVARMEELL 113 >UniRef50_B9KAB3 Ribosome-binding factor A n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KAB3_THENN Length = 132 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 4/111 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R + E+QK + LQ +++DPRL T S VE+S+D YA VYV+FL +E Sbjct: 9 RKAMLESEIQKLLTEALQ-QLRDPRLKKEFVTFSRVELSKDKRYADVYVSFLGSPEE--R 65 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + ++ L A GF R+ + K ++L + PE+ F+ D + +R+ L+ + Sbjct: 66 REAVEILNRAKGFFRTYVAKNLKLYVAPEIRFYEDKGIEASVRVHQLLNQL 116 >UniRef50_C6HXK3 Ribosome-binding factor A n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXK3_9BACT Length = 120 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 6/122 (4%) Query: 1 MAKEF--GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 M K+F R RVA E+++ +A ++ R ++PR+ T++ V +S DL A V+ Sbjct: 1 MRKDFGFRRADRVASEIREIMATVVARYFREPRIAS-VTITRVRLSDDLRNATVFFAVFP 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +D ++ L+ S +R + + +R++ +P L+F +DN E R+ +L + Sbjct: 60 GEDPQSMGEI---LERHSPILRKEMARQLRIKYIPRLSFVHDNGNDEEGRIESLFDQISG 116 Query: 119 HD 120 D Sbjct: 117 ED 118 >UniRef50_A3HU14 Ribosome-binding factor A n=1 Tax=Algoriphagus sp. PR1 RepID=A3HU14_9SPHI Length = 128 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+ A+ +QKEI I Q++ K M TV+ V +S DL AKVY++FL E Sbjct: 2 ESKRQQKYAKLIQKEIGDIFQKDAKHLVGRAMITVTHVLVSPDLGLAKVYLSFLLADPE- 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + K + + IR L K + +R++PEL FF D+S + +++ + Sbjct: 61 ---STYKLINDHKKEIRHQLAKRIGKSVRVIPELAFFPDDSASYAQHIEKVISDLEIPK 116 >UniRef50_B5Y926 Ribosome-binding factor A n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=RBFA_COPPD Length = 137 Score = 110 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 4/125 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +R+ Q +++E++ IL ++ D RL T++ VE+S D Y KVY + + K+ + Sbjct: 5 RKERLQQAIKQELSKILLEDMNDERLK-FVTITDVELSDDQKYLKVYFSTMPGKNSEQ-- 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 +++L+ G++ + + +RLR PE+ F DNS+ G+RM L+ + K DE + Sbjct: 62 -ILQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDEVKEDE 120 Query: 127 PDDSK 131 + + Sbjct: 121 SHEDE 125 >UniRef50_B2S4C7 Ribosome-binding factor A n=4 Tax=Treponema RepID=RBFA_TREPS Length = 126 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 4/119 (3%) Query: 1 MAKEFG-RPQRVAQEMQKEIALILQ-REIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN 58 M + R +++ + ++ EIA ++ +IKDPR+ +V+ V++S + A+VYV+ Sbjct: 1 MKQVSQLRVRKLGEHIRAEIAQLIMLGKIKDPRVSPFLSVNWVDVSGGMVCARVYVSSFM 60 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + K G++ L+ A+GFIRS+L K +RLR P L+F YD S+ +G +S + + Sbjct: 61 G--KYKTKQGVQGLESAAGFIRSVLAKKLRLRQCPRLSFVYDESVRDGFSLSRKIDRLE 117 >UniRef50_A8SMZ5 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMZ5_9FIRM Length = 132 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 4/132 (3%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTT-VSGVEMSRDLAYAKVYVTFLNDKDE 62 R R+ E+ + ++ + IKD R+ T ++ V ++ DL V + D Sbjct: 2 NAKRLGRIESEINRVLSDAIYNGIKDNRIDPSITNITKVSVTNDLGICYVSIGVFGDT-- 59 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD-E 121 + +K L+ A+G+++ + + + LR P+L F D S + M+ L+ V K D E Sbjct: 60 KTKEKTMKGLESATGYMKKRISETLDLRHTPKLIFKLDESFEKAALMNELIIKVSKEDRE 119 Query: 122 ERRVNPDDSKED 133 +R + + ++E+ Sbjct: 120 KRELYGNANEEE 131 >UniRef50_A8PNL0 Ribosome-binding factor A n=1 Tax=Rickettsiella grylli RepID=A8PNL0_9COXI Length = 130 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 6/131 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN- 58 M K R R+A ++KE++ IL +EI D RL T++ V++SRDL+YA + T L+ Sbjct: 1 MQKNSNRVARIADLIKKELSNHILNKEIADSRLK-FITITSVKVSRDLSYADILFTQLSV 59 Query: 59 ---DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 D+ + + ++ +++AS +R L + + L +P L FFYD+ L E R+ L+ Sbjct: 60 ENSDEKQKDKELAVQLVRKASARLRYALAQRLHLYKIPRLRFFYDDFLEESHRLHCLIEQ 119 Query: 116 VVKHDEERRVN 126 + D+ +R Sbjct: 120 AMTKDKSKRTE 130 >UniRef50_Q493T6 Ribosome-binding factor A n=2 Tax=Candidatus Blochmannia RepID=RBFA_BLOPB Length = 119 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 78/116 (67%), Gaps = 1/116 (0%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 + R QR+A E+ K++++ILQ +I D R+G + T+SGV++S+DL A ++VTF+N + Sbjct: 4 QHSYRTQRIANEIHKKVSIILQHKIDDIRIG-IPTISGVQVSKDLKNANIFVTFINKEGP 62 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + + + LQ AS FIR LL M +R+ P L F YD+SL+EG ++ +L+++ K Sbjct: 63 EEIDTAVMILQRASRFIRFLLANTMCIRVAPILFFKYDSSLIEGAKVCSLISTTEK 118 >UniRef50_Q2RMR9 Ribosome-binding factor A n=4 Tax=Rhodospirillaceae RepID=RBFA_RHORT Length = 164 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV +E++ +A + +R ++DP + + TV+ V +S DL A V++ L Sbjct: 10 TQRQLRVGEEIRHALAEVFERGTVRDPAVAGVALTVTEVRISPDLRNATVFLVRLGGGP- 68 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 + + L++A F+R + + + VP+L F D S ++ L+ Sbjct: 69 --LDEVLTGLRKARAFLRREVAIRIHTKFVPDLRFESDPSFDYAEYINGLLHR 119 >UniRef50_B3QZW6 Ribosome-binding factor A n=4 Tax=Candidatus Phytoplasma RepID=RBFA_PHYMT Length = 114 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 67/112 (59%), Gaps = 3/112 (2%) Query: 8 PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 +++A ++KE+ALI+ I++ ++G V+ V+++ DL++A VY LN++ + + Sbjct: 5 NEKLASLIKKELALIINVSIRNNKIG-FINVTEVKLTNDLSFANVYYVILNNQ-PEFLSL 62 Query: 68 GIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + +++ IR LL K +R +R +PEL F YD SL G + N++ + K Sbjct: 63 AAEIIEKNKSTIRMLLAKKIRNIRKIPELVFIYDTSLEYGNHIDNILKGINK 114 >UniRef50_Q1AW53 Ribosome-binding factor A n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RBFA_RUBXD Length = 122 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 4/122 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +++ +++ + + + DPRL + TV+GV +S +L++A V+ + L D + + Sbjct: 5 RTRKIEARLKEIVGDEVA-SLSDPRLKGLVTVTGVRVSPNLSHATVFYSLLAGGDPEEAR 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 LQ A+G I++ +G RL+ P L F D ++ R+ + V D + Sbjct: 64 E---GLQSAAGRIQAAVGAQTRLKRTPRLRFEPDPTVERVTRIQRTLREVSGEDGDGNGT 120 Query: 127 PD 128 + Sbjct: 121 QE 122 >UniRef50_C1TMK9 Ribosome-binding factor A n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMK9_9BACT Length = 146 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +RV +E+Q+EI+ +L+ +KD V+GV+ ++DL AKVY T ++ +D +V Sbjct: 23 RIERVNKELQREISRLLEFSVKDENAKRAV-VTGVDCAKDLKSAKVYFTTISPEDRRSVS 81 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 L++ F+RS L + +R+R VPEL F YD S G + L+ VV H+E Sbjct: 82 ES---LKKVRTFLRSSLAQTLRIRTVPELRFIYDTSGEYGRSIDRLLDMVVTHEENTDYV 138 Query: 127 PDDSKE 132 D E Sbjct: 139 EGDDGE 144 >UniRef50_B1LCH6 Ribosome-binding factor A n=8 Tax=Thermotogaceae RepID=RBFA_THESQ Length = 131 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 5/117 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLND 59 M + R + E+QK + LQ +++DPRL T S VE+S+D YA VYV+FL Sbjct: 1 MNPAY-RKAMLESEIQKLLMEALQ-QLRDPRLKKDFVTFSRVELSKDKRYADVYVSFLGT 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 +E K ++ L A GF R+ + K +RL + PE+ F+ D + +++ L+ + Sbjct: 59 PEE--RKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVKVHQLLVQL 113 >UniRef50_B2S1E6 Ribosome-binding factor A n=2 Tax=Borrelia RepID=RBFA_BORHD Length = 119 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 4/122 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M KE R ++ + +EI IL + IKDPR+ TV VE+S DL AKV++ + Sbjct: 1 MEKEI-RKSKLESLLVQEIGNLILTKGIKDPRVHEFLTVVRVEISNDLINAKVFIGSI-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K+ ++ +KAL A GFI+ + K +R+R P+L+F D+++ + ++ ++ ++ Sbjct: 58 KEGASLDNAVKALNNAKGFIQGEIVKRIRVRNTPKLSFLRDDTISKAFYVNKIIENLSFS 117 Query: 120 DE 121 DE Sbjct: 118 DE 119 >UniRef50_A5CXX7 Ribosome-binding factor A n=4 Tax=Bacteria RepID=RBFA_VESOH Length = 114 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 5/112 (4%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +R+ + +++E+ L+L+ IKDPRL M ++ V +SRDL+ AKV+ T + ++ Sbjct: 8 SYRVERINELIRRELTLLLRTSIKDPRLRDMI-ITDVLISRDLSSAKVFYTVI----KED 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 K L +ASGF R L K + LR P L F +D++ G R+ L++ + Sbjct: 63 KKMIEPLLDKASGFFRIHLSKTIDLRHTPVLRFIFDSAPNTGARIEQLLSKL 114 >UniRef50_Q7NBZ3 Ribosome-binding factor A n=1 Tax=Mycoplasma gallisepticum RepID=RBFA_MYCGA Length = 121 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 67/125 (53%), Gaps = 6/125 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K + R+ + K ++ + EI + + ++ +++S D + AK+Y+ L Sbjct: 3 MSK--IKTLRLEATIHKLLSQAISTEINNSLIKTSV-ITAIKLSDDKSVAKIYIDCL--- 56 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + ++A ++A+G R +L K + +R +P+L F+YD+S+ +G ++ ++ + + Sbjct: 57 IPNNIAKTLQAYKDATGVFRHVLSKHLTIRRIPQLVFYYDDSISKGAKIDQILAEIKQEK 116 Query: 121 EERRV 125 +E Sbjct: 117 KENHE 121 >UniRef50_B9JYK7 Ribosome-binding factor A n=12 Tax=Rhizobiales RepID=RBFA_AGRVS Length = 137 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 9/132 (6%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV ++++ I +LQR E++D + + ++S V MS DL A YV+ L D Sbjct: 10 SQRMLRVGEQVRAAITQVLQRGEVRDDLIEKTVISISEVRMSTDLKVATAYVSPLGVSD- 68 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMR-LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 I AL + +IR +G +R ++ +PE+ F D S ++ L+ S + Sbjct: 69 --HDTVIAALNRHAKYIRGRIGGQLRQMKYMPEVRFRDDTSFDNYQKIDALLRS---PEV 123 Query: 122 ERRVNPDDSKED 133 R + PD+ K++ Sbjct: 124 ARDLGPDEDKQE 135 >UniRef50_B1CB53 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CB53_9FIRM Length = 121 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 3/117 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLG-MMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RV + ++ E++L+++ E+ DPRL + +V V+ + DL YAKVYV+ + + ++ Sbjct: 4 RIERVNELIKNELSLLIELELNDPRLKEAIISVVRVKATPDLKYAKVYVSVMGENNKK-- 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 + I L +A GF+R + K + R PEL F DNSL M + ++ + D+E Sbjct: 62 EEIIGVLDKAKGFLRKSIAKVLNTRNTPELIFELDNSLDYAMHIDEVLAGLDIKDDE 118 >UniRef50_C0VVG3 Ribosome-binding factor A n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVG3_9CORY Length = 160 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 4/124 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND- 59 MA + R R+A+ +Q +A L+ EIKD L TV+ ++ DL A VY T Sbjct: 21 MADKV-RAGRMAKRIQTIVATALEHEIKDWHLEY-ITVTDCSLTGDLHDATVYYTVRGKT 78 Query: 60 -KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 +E A ++L G +R ++G + +R P L+F D M +L+ Sbjct: 79 LDEEPDYAAAAESLNRWKGRLRKIVGDQLSVRFTPTLSFELDTVPESRAHMEDLLARARA 138 Query: 119 HDEE 122 DEE Sbjct: 139 RDEE 142 >UniRef50_A4X4N9 Ribosome-binding factor A n=4 Tax=Actinomycetales RepID=RBFA_SALTO Length = 156 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 3/116 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 + +R A+ +++ +A +++ +IKDPRLG M T++ ++ DL A V+ T L D A Sbjct: 6 KVRRHAERVRELVASVVRSQIKDPRLG-MITITDARITADLRDATVFYTVLGDASAQAST 64 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A AL+ A G +RS +GKA+ LR P LTF D+ + + +L+ D E Sbjct: 65 A--AALESAKGMVRSTVGKALGLRHSPTLTFVLDDVQDQVKHIDDLLAQARHADAE 118 >UniRef50_UPI0001745B62 ribosome-binding factor A n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745B62 Length = 163 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV + +++E+ I+ R G + T+ V+++ DL +YV L E A Sbjct: 14 NHRLARVRELIKRELGPIVDRNF--TFAGSVVTIHEVDVTPDLKQCFIYVGILG--KEHA 69 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK--HDEE 122 ++ L E G I+ L K + L+ P LTF YD S+ G+R+ L+ ++ + DEE Sbjct: 70 APNIVRKLNENRGLIQRELFKRVILKNSPSLTFKYDTSIERGVRVLALIETLPEPLPDEE 129 Query: 123 RRVNPDDSKED 133 +D Sbjct: 130 PVAEEGVDNDD 140 >UniRef50_Q7V3G3 Ribosome-binding factor A n=7 Tax=Prochlorococcus marinus RepID=RBFA_PROMP Length = 132 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 4/129 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLND 59 M + R +++ ++KEI LILQ ++++ L +S +E+S DL + K+Y+T + Sbjct: 1 MPNNY-RIAKISSLLKKEITLILQNDLENDLLRSNFINISKIELSGDLQFCKIYIT--ST 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 +E K ++ L A +IR LG+ + +R VPE+TF D L +G+ + L+ + Sbjct: 58 AEEAIRKEIVEELNLAKTYIRHTLGQRIEMRRVPEMTFKDDTVLEKGLSVLKLLAELKNK 117 Query: 120 DEERRVNPD 128 + + Sbjct: 118 KHNQDSKVE 126 >UniRef50_B4CYQ3 Ribosome-binding factor A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ3_9BACT Length = 128 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 4/112 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +RV + +++E+ +L RE+ + TV V+++ DL +A V+++ + ++ Sbjct: 3 HRLERVNELLKRELGELLSREVSFE--AALVTVQQVDITPDLKHAHVFISVIGSDEQAR- 59 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 A + L ++ ++ LL K + L+ P L F D S+ G R+ N+++ + Sbjct: 60 -AAMAKLHDSRKNLQHLLSKRVVLKYTPHLHFKLDESIERGTRVINILSQIE 110 >UniRef50_D2MK31 Ribosome-binding factor A n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MK31_9BACT Length = 117 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 3/106 (2%) Query: 18 EIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASG 77 E+A IL R+ KDPRL TV+ VEM+ DL A VYV+ L ++ + K L ASG Sbjct: 2 EVADILARKCKDPRLR-FVTVTDVEMNNDLRKAYVYVSLLG--NQVETETVGKILDNASG 58 Query: 78 FIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 F+R LG+ + LR PE++F +D+ ++ ++ +V E Sbjct: 59 FVRLELGRRLELRYTPEVSFRFDSGGSRAEKIGLILDAVRPESESE 104 >UniRef50_Q8RHJ7 Ribosome-binding factor A n=14 Tax=Fusobacterium RepID=RBFA_FUSNN Length = 120 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 68/121 (56%), Gaps = 6/121 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLN-- 58 M K+ R + + +E+ + I+ +L E+K+P++ + +V+ V+++ DL +A Y + L Sbjct: 1 MKKQ--RLEGIGKEIMRVISKVLLEEVKNPKIKGLVSVTEVDVTEDLKFADTYFSILPPL 58 Query: 59 --DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D+ + + ++AL E GF+R + + + +R PE+ DNS+ ++++ L+ + Sbjct: 59 KSDEKKYDHEEILEALNEIKGFLRKRVAEEVDIRYTPEIRVKLDNSMENAIKITKLLNDL 118 Query: 117 V 117 Sbjct: 119 K 119 >UniRef50_Q16CE6 Ribosome-binding factor A n=43 Tax=Rhodobacterales RepID=RBFA_ROSDO Length = 143 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 6/134 (4%) Query: 2 AKEFGRPQRVAQEMQKEIALILQR-EIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLND 59 R RV + +++ ++ +L R ++ D L + TV V S DL A YV L Sbjct: 13 PGPSQRQLRVGETIRRALSDVLARGDVHDTDLNRLSVTVGEVRASPDLKIATAYVLPLGG 72 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV-K 118 I L G +R L+ K + L+ P+L F D + ++ K Sbjct: 73 ---QGKDEVIALLARNKGELRRLVAKKLTLKFAPDLRFQLDETFDRMDETREMLNRAEVK 129 Query: 119 HDEERRVNPDDSKE 132 D + E Sbjct: 130 RDTGPVPAGESDTE 143 >UniRef50_B0B9K3 Ribosome-binding factor A n=13 Tax=Chlamydiaceae RepID=RBFA_CHLT2 Length = 123 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 69/126 (54%), Gaps = 4/126 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLND 59 MA E R ++V +++ IA ++ +++K P++ T++ V +SRDL A VYV+ + Sbjct: 1 MA-ENRRMKKVNAMLREAIAKVILKDVKHPKISNRWITITRVSLSRDLQSACVYVSIMP- 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 E++ + + AL+ ++GFI K + L+ P+L F+ ++ + +L+ + + Sbjct: 59 -HENSQEETLAALKASAGFIAFQASKDLVLKYFPDLNFYVEDIFSPQDHIESLLLKIAEQ 117 Query: 120 DEERRV 125 D++ Sbjct: 118 DKKTNP 123 >UniRef50_A9ITX2 Ribosome-binding factor A n=5 Tax=Bordetella RepID=RBFA_BORPD Length = 136 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 5/113 (4%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+A ++QK++A ++QRE+ R G + T+SGVE+S D A+AKVY T L + Sbjct: 12 RNLRLADQIQKDLAGLIQRELDMSRAG-LITLSGVELSADYAHAKVYFTVLGAEP----D 66 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 A L E +G++ S L K + + VP L F +D + G+ MS L+ + Sbjct: 67 AAAALLNEKAGWLHSQLYKLLHIHTVPTLRFVHDAQIARGIEMSALIDRANRP 119 >UniRef50_A4E6U6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U6_9ACTN Length = 136 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ +R+ +++++++ IL E+ DPRL + T++ VE++ D ++A+VYV+ D Sbjct: 2 KQTQATRRLGEQLREKLGYILLFEVSDPRLD-LVTLTAVEVAVDRSFARVYVSC----DA 56 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS-----VV 117 ++AL A G IRSLL +++ R+ PEL F D S E R++ + + + Sbjct: 57 SRYDEVMEALASAKGRIRSLLARSLDWRVTPELDFRIDRSTDEAERITRALENVPATLAI 116 Query: 118 KHDEERRVNPDDSKE 132 + DE+ D ++E Sbjct: 117 EKDEDGYPIADAAQE 131 >UniRef50_B1GZN7 Ribosome-binding factor A n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZN7_UNCTG Length = 121 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + R RV++ +Q+ I+ I+ RE+KD G + TV G ++ DL K+Y + L Sbjct: 1 MPLSYKRSVRVSELIQQTISSIV-REMKDLDAG-LVTVMGANLTDDLLSCKIYYSVLGS- 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 E+ K L+ ++ +R L + LR P ++F YD+S ++ +++ + + Sbjct: 58 -EEYKKKVAGILKRSTKQVRHKLALRLNLRCTPTISFVYDDSNERATKVFDMLQRIEEEK 116 Query: 121 EE 122 ++ Sbjct: 117 DK 118 >UniRef50_A7HZ94 Ribosome-binding factor A n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=RBFA_PARL1 Length = 140 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRL-GMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + +++ ++ ++ R I+DP L +V+ V +S DL +A +V L D Sbjct: 17 SQRQLRAGELIRRALSDVVTRGTIQDPDLIERSFSVTEVRVSPDLRHATCFVAPLGKGDA 76 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A+ A + G++R L K + + +P+LTF D S + ++ L+ S Sbjct: 77 AALAAALT---RVRGYLRGQLSKEVTFKYMPDLTFEPDTSFDKAEQIDRLLHS---PKVS 130 Query: 123 RRVNPDDSKE 132 + ++P D +E Sbjct: 131 QDLSPQDDEE 140 >UniRef50_C8QYE1 Ribosome-binding factor A n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYE1_9DELT Length = 135 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 4/117 (3%) Query: 6 GRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 RP R+A E+++E+A +L +++DPR+ T+ ++ DL+ A++Y + DE A Sbjct: 23 RRPDRIADEIRQEVAALLVAKVQDPRVAK-VTILRATVTPDLSQARLYYSVF---DEAAA 78 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 K L A GFIRS L K + LR+VP L F +D SL E ++ + + +EE Sbjct: 79 AEAAKGLASAKGFIRSSLAKNLALRVVPALIFEHDRSLAEQEKLERIFQEIKAGEEE 135 >UniRef50_B1ZX44 Ribosome-binding factor A n=1 Tax=Opitutus terrae PB90-1 RepID=RBFA_OPITP Length = 122 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV + +Q+E++ IL++ + T++ + ++ DL A+V+V+ + +E Sbjct: 2 SNRTLRVNELIQRELSEILRKRYQSE--ATAITITELRVAPDLRDARVFVSIVGSAEEQD 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 K ++ L+ +G +R +G+ + L+ +P+ + D+S + R+ ++ + + R Sbjct: 60 EK--LRWLRAHAGELRYEVGRRIVLKYLPKFEYVLDHSPEKSARILQVLDEIDRQTPPRP 117 Query: 125 VNPDD 129 +D Sbjct: 118 EAEND 122 >UniRef50_B0MQX5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQX5_9FIRM Length = 126 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 4/123 (3%) Query: 8 PQRVAQEMQKEIALILQREIKD-PRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R+A+++++EI+ + R+IKD + M VS E++ DL+Y KVY+T L D K Sbjct: 6 TARLAEDIKREISTAM-RDIKDGAVVKAMVGVSRCELTSDLSYCKVYITTLEGGD--TTK 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVN 126 + L++A GF + + + +++R +P+L F DNS+ +S +++ + K E Sbjct: 63 NVAEHLKKAEGFFKRRINERVKMRKLPQLIFVPDNSMDYYEHISEVISKLPKPAEPDDNG 122 Query: 127 PDD 129 D+ Sbjct: 123 DDE 125 >UniRef50_A4S0F7 Predicted protein (Fragment) n=3 Tax=Mamiellales RepID=A4S0F7_OSTLU Length = 171 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 15/134 (11%) Query: 6 GRPQRVAQEMQKEIALILQREIK-------------DPRLGMMTTVSGVEMSRDLAYAKV 52 R Q+V Q+M++EI+ ++Q + D L +M TV+ VE+S DL KV Sbjct: 8 RRVQKVQQQMRREISSMMQSDKNLRAMISPEERMGVDHMLSVMATVADVEVSNDLQVVKV 67 Query: 53 YVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNL 112 YV+ L DE IK ++ ++R +G+ M LR+ PE+ F YD+S G ++S L Sbjct: 68 YVSILG--DERGKNNAIKGMKRMEQYVRRKIGRRMSLRLTPEIRFIYDDSFERGQKVSAL 125 Query: 113 VTSVVKHDEERRVN 126 + + + + Sbjct: 126 LDEIRLENRNKTAK 139 >UniRef50_C8W718 Ribosome-binding factor A n=5 Tax=Coriobacteriaceae RepID=C8W718_ATOPD Length = 136 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 5/114 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ +R + +++++ IL EI DP L + T++ E+S D ++ +VYV+ + Sbjct: 2 KQNQFSRRTNEVAREKLSWILLFEISDPDL-QLVTITSCEVSVDKSFMRVYVSC----EP 56 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 D + + AL+ A G IRSLLG A+ R+ PEL F D + E R++ + V Sbjct: 57 DRYEKVLAALKRAKGRIRSLLGHALNWRVTPELDFKIDTTTDEAERIAQALEVV 110 >UniRef50_C2BRN5 Ribosome-binding factor A n=3 Tax=Mobiluncus RepID=C2BRN5_9ACTO Length = 145 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 3/94 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R ++VA + +A +L +IKDPRLG T++ VE++ DL +AKVY T E Sbjct: 5 RREKVAANILTTVASMLAGKIKDPRLG-FVTITSVEVTGDLQHAKVYYTAYGSDTERT-- 61 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYD 100 A AL+ A G IRS +GK + R+ P L F D Sbjct: 62 ASGAALESAKGLIRSRVGKNLGTRLTPTLEFVSD 95 >UniRef50_Q3AQK8 Ribosome-binding factor A n=11 Tax=Chlorobiaceae RepID=RBFA_CHLCH Length = 123 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 7/127 (5%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +RVA +Q E+ I Q E+ PR + T+ V+++ DL A+VY++ + +E A Sbjct: 2 SRRTERVASLLQHELGAIFQLEL--PR-TPIVTIVEVKVTVDLGIARVYISTIGTPEEQA 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEE 122 A + LQE + +IR LL + +R R +PEL F+ D+ + L++ V K + Sbjct: 59 --AIMAHLQEQNKYIRKLLSQRIRHQFRRIPELEFYEDHLYEHARHIEQLLSQVRKAPVD 116 Query: 123 RRVNPDD 129 P D Sbjct: 117 DAETPLD 123 >UniRef50_A9G882 Ribosome-binding factor A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=RBFA_SORC5 Length = 124 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTF-LND 59 M+ R RVA+ ++++++ +L R+++DPR+ + VS VE++ DL AKV+V Sbjct: 1 MSGVVKRATRVAERLREDLSNLL-RDLRDPRIAGVL-VSRVEITDDLQSAKVHVRHEFGA 58 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 +D A +A +K L+ ASG +R + + M LR+VP L FFYD R+ L+ + Sbjct: 59 EDAAARRALLKGLEAASGRLRRDVARTMGLRVVPTLRFFYDEGPDAERRIEELLREIKDG 118 Query: 120 DEERR 124 R Sbjct: 119 SSGER 123 >UniRef50_B0T172 Ribosome-binding factor A n=7 Tax=Caulobacteraceae RepID=RBFA_CAUSK Length = 164 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 19/148 (12%) Query: 5 FGRPQRVAQEMQKEIALILQRE-IKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R R + ++ + IL+ E + DP L + T+S V MS DL +A +V L Sbjct: 16 SQRQLRAGELIRHALVDILREEDLVDPALAGISVTISEVRMSADLKHAICFVEPLGASIA 75 Query: 63 DAVK-----------------AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 V+ + L + F+R L K + ++ PEL F +D + Sbjct: 76 PQVEREPSSPSRTVVVPGSPAEVVAGLTRLTKFLRGKLAKTIDMKFTPELKFLHDETFNS 135 Query: 106 GMRMSNLVTSVVKHDEERRVNPDDSKED 133 M L + RR++ E+ Sbjct: 136 ATYMDRLFEDPRVQQDVRRLSDVAEDEE 163 >UniRef50_C9LIQ3 Ribosome-binding factor A n=7 Tax=Prevotella RepID=C9LIQ3_9BACT Length = 134 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 6/114 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q++ + +QKE++ +LQR+ + G++ +VS V +S DL+ + Y++ + Sbjct: 25 ETTRQQKIERLIQKELSDMLQRQTQQAP-GVLVSVSRVRISPDLSVCRGYLSVFPS---E 80 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTS 115 + + + +R LGK +R LRI+PEL FF D+SL + L+ Sbjct: 81 RGEEIVANINANVKTVRFELGKRVRHQLRIIPELKFFIDDSLDYIEHIDELLKQ 134 >UniRef50_A9WPV9 Ribosome-binding factor A n=4 Tax=Actinomycetales RepID=RBFA_RENSM Length = 146 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 3/114 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R+AQ ++ +A L++++K P + T++ ++ DL +A +Y T + A + Sbjct: 6 RAARLAQRIKVIVAEALRKQVKQPGVEN-ITITETRVTNDLQHATIYYTIFGGTE--ARQ 62 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +L ++ G +R +GK + +R+ P L F D + L+ + D Sbjct: 63 EAEDSLAKSKGILRREVGKNLTIRLTPTLEFISDEVPETASHVEELIRLAKERD 116 >UniRef50_B5RMZ6 Ribosome-binding factor A n=2 Tax=Borrelia RepID=B5RMZ6_BORDL Length = 129 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 4/122 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALIL-QREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K R ++ + +EI ++ R IKDPR+ TV VE++ DL KV+V + Sbjct: 11 MEKAI-RKSKLESLLVQEIGNLIVTRSIKDPRVHEFLTVVRVEIANDLINTKVFVGSI-- 67 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K+ ++ IKAL A GFI+ L K +++R P+L F D+++ + ++ ++ ++ Sbjct: 68 KEGVSLDNAIKALNNAKGFIQRKLVKRIKVRNTPKLNFIRDDTISKAFYVNKIIENLNFS 127 Query: 120 DE 121 +E Sbjct: 128 EE 129 >UniRef50_D0LZ88 Ribosome-binding factor A n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ88_HALO1 Length = 150 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 3/117 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLG--MMTTVSGVEMSRDLAYAKVYVTFLN 58 MA+ R RV +++ + ++ RE+KDPR+ + +++ VE++RDL+ A +YV+F+ Sbjct: 1 MAQGNRRQ-RVGNALREVLTELVARELKDPRVHAAGLVSINQVELNRDLSVAFIYVSFVG 59 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTS 115 D A K + LQ A+GF+R + ++L+ PEL F D +M +LV Sbjct: 60 APDARAEKRALDGLQAAAGFLRGPAARRLKLQRAPELRFMDDPRGAFAEQMRSLVRD 116 >UniRef50_UPI00016C0EBD ribosome-binding factor A n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EBD Length = 116 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 72/121 (59%), Gaps = 7/121 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQRE-IKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLN 58 MA + + RV +E+QKE+A I++ + IKD R+ M +V+ V+ + DL AK++++ L Sbjct: 1 MANQ--KIIRVNEEIQKEVAEIIRGDSIKDARMKDIMVSVTAVDTTTDLKNAKIFISVLQ 58 Query: 59 DKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 D +D + L +S FIR L + + LR PE++F DNS+ G++M+ ++ V+ Sbjct: 59 DNKKDD---VLDVLNGSSKFIRKELARRINLRNTPEISFKLDNSIAYGIKMAKIIHEVMD 115 Query: 119 H 119 Sbjct: 116 K 116 >UniRef50_Q0SM49 Ribosome-binding factor A n=18 Tax=Borrelia burgdorferi group RepID=RBFA_BORAP Length = 120 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 4/123 (3%) Query: 1 MAKEFGRPQRVAQEMQKEIALIL-QREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M K + ++ + +EI ++ R IKDPR+ TV VE S+DL AKV++ + Sbjct: 1 MYKNIKK-FKLESFIAQEIGNLIVSRGIKDPRIHSFLTVVKVEFSKDLINAKVFIGSI-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 K+ ++ +KAL A GFI+S + K +++R P+L F D+SL + ++ ++ + Sbjct: 58 KEGASLDNAVKALNNAKGFIQSQIIKRIKVRSTPKLLFVKDDSLSKSFYVNKIIEGLNTI 117 Query: 120 DEE 122 E Sbjct: 118 REN 120 >UniRef50_Q14NW2 Putative ribosome-binding factor a protein n=1 Tax=Spiroplasma citri RepID=Q14NW2_SPICI Length = 112 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 5/117 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + + +R+ + +++ +I+QREI+D L + ++ V++S DL++AKVY + L +K Sbjct: 1 MANKI-KVERMQSLIARDLTIIMQREIRDEILNTL-SIHAVKLSNDLSHAKVYYSSLLNK 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 E + + Q IRS L + + P+L F +D SL + ++ ++ Sbjct: 59 PEAELHNIV---QNYKNKIRSKLAHKLEIYRCPDLEFIFDRSLDNANNIEAILQNLK 112 >UniRef50_C8X0G5 Ribosome-binding factor A n=3 Tax=Desulfovibrionales RepID=C8X0G5_DESRD Length = 120 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 3/100 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R QR+ + +EI +L E KDPRL + T+SGV M+R+L A+V T +D++ Sbjct: 6 TRRAQRMGDTIMREIGHLLVEEAKDPRL-QLVTISGVRMNRNLQVAEVLFTHPEGRDKE- 63 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLV 104 + I AL+ ASGF+R+ LGK +RLR VP+L F +D L Sbjct: 64 -QEIITALESASGFLRTALGKRLRLRFVPQLRFTWDTFLE 102 >UniRef50_B0PH14 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PH14_9FIRM Length = 118 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 66/117 (56%), Gaps = 3/117 (2%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R R +++ +E+ I+ R +KDPR+ + ++ ++++RDL++ KVY++ ++ Sbjct: 5 RASRTEEDIHRELCDIM-RGLKDPRVSGLISIVKLDLARDLSHCKVYISSMDGIAAAKSA 63 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 A L+ A GFI+ L ++LR +PE +F D+S+ ++ ++ + D+E Sbjct: 64 AA--GLRSAQGFIKRELNARLKLRKLPEFSFIADDSIAHSADIARILDGLHTQDQEH 118 >UniRef50_A6CF42 Probable ribosome-binding factor A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF42_9PLAN Length = 139 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 67/129 (51%), Gaps = 3/129 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +++AQ + + ++ + ++DPR+ TV V+++ D+ AK+Y++ + D+ E A Sbjct: 3 SRRLEKIAQAILETVSTTILLHLRDPRIRN-VTVLHVDVAPDVQSAKIYISIMGDEKEKA 61 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + LQ A GF++S + ++ + P + F D ++ + + ++ + E Sbjct: 62 L--CMHGLQSAKGFLQSKIADRIQTKYTPVIKFVLDTAVKDSLDTIRILDELQVEREAEE 119 Query: 125 VNPDDSKED 133 + + S E+ Sbjct: 120 LAENSSSEE 128 >UniRef50_C4XE44 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE44_MYCFE Length = 335 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 7/121 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K +R +++ +A I+ ++ + + + T+ E+S DL++ K+Y++F Sbjct: 11 MPKSINTLRR-ESQIRTLLAEIITNDLTNTNI-INPTLVDCELSGDLSHVKIYMSF---- 64 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + K G++ALQ ASG+IR++L K++ R VPEL F+ D + + + ++ + Sbjct: 65 -SENEKRGLEALQNASGYIRTILAKSLNWRKVPELHFYIDEVSKKCLSIDRILYDIKDEK 123 Query: 121 E 121 Sbjct: 124 N 124 >UniRef50_A6DGZ4 Ribosome-binding factor A n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DGZ4_9BACT Length = 119 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 5/124 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M+K+ R + V +QKE++ + RE+ P + TV+GV+ S DL + VYV+ + Sbjct: 1 MSKD--RMRSVDSTIQKELSSVFIREVF-PCFECLITVTGVKTSADLRHCNVYVSVMGSN 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + I+ L++ S + L K +R++ P + + D++ R+S+L+ S+ Sbjct: 58 QQK--EDVIRFLRDRSEEFFNHLSKRIRMKFTPVIHWHCDDTPETADRLSSLIDSIDIPS 115 Query: 121 EERR 124 E+ Sbjct: 116 EDED 119 >UniRef50_Q1IIT5 Ribosome-binding factor A n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RBFA_ACIBL Length = 123 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%) Query: 9 QRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAG 68 +R+ + +++EI IL+ E+ DPR+G + TVS V ++ + A V V +E Sbjct: 11 ERLGEAIREEIGAILEGELGDPRIG-LVTVSEVMIASNGKSAIVLVAVAG--EEQEAVDT 67 Query: 69 IKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 ++ L A+G+IR + + LR+ PEL F D + G R+ L+ V K + R Sbjct: 68 LEGLAAATGYIRHEVAARLGLRVAPELLFRLDQTERYGGRVEELLKRVNKRKKSSR 123 >UniRef50_C1SPK3 Ribosome-binding factor A n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPK3_9BACT Length = 96 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 58/99 (58%), Gaps = 4/99 (4%) Query: 21 LILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIR 80 ++ +E+ DP++ + ++ +++++DL+ AKVY + N ++ ++ + L ++GFIR Sbjct: 2 DVIIKEVNDPKIKDVV-LTKIDVTKDLSIAKVYFSTYNKSAKEGIE---RGLNRSAGFIR 57 Query: 81 SLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 + K +RL+ VP L F YD+S G ++ L+ + Sbjct: 58 HCILKGLRLKKVPTLRFIYDDSGDYGQKIDGLLKDITSE 96 >UniRef50_Q11P01 Ribosome-binding factor A n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=RBFA_CYTH3 Length = 133 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 72/129 (55%), Gaps = 8/129 (6%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R Q+VA+ + KE+A I +E + + +++ V MS DL+ AK+Y++ + ++ Sbjct: 2 ESVRQQKVARLILKEMADIFLKESRVLFGNVFISITVVRMSPDLSVAKLYLSIML---QE 58 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSV---VK 118 A +K ++ + +R LLG+ +R +RI+PE+ F+ D+++ M ++++ + K Sbjct: 59 DKNAILKEIKVHTKELRKLLGERIRKQVRIIPEIIFYLDDNVDYANHMDDVLSKITIPKK 118 Query: 119 HDEERRVNP 127 DE N Sbjct: 119 EDENFDPNQ 127 >UniRef50_Q2G5E9 Ribosome-binding factor A n=6 Tax=Sphingomonadales RepID=RBFA_NOVAD Length = 135 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 12/137 (8%) Query: 1 MAKE-------FGRPQRVAQEMQKEIALILQR-EIKDPRLGM-MTTVSGVEMSRDLAYAK 51 MAK+ R +V ++++ ++ +L R E+ D L +V+ V MS DL +A Sbjct: 1 MAKQQTSPETRSVRLLKVGEQVRHILSELLARQEVHDDVLSAHTVSVTEVRMSPDLRHAT 60 Query: 52 VYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSN 111 V++ L +DED +KAL+ + F + + + +RL+ L F D S ++ Sbjct: 61 VFIKALLGEDED---LVLKALRTNTAFFQREVAQRLRLKYAARLKFLADESFDVASKIET 117 Query: 112 LVTSVVKHDEERRVNPD 128 L+ + R D Sbjct: 118 LLADPKVQRDLRDQESD 134 >UniRef50_Q01W29 Ribosome-binding factor A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RBFA_SOLUE Length = 123 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 + R RV++ +++E++ I+ E+ DPR+ V+ V +S D +A + + D+ + Sbjct: 2 DERRTLRVSEAVREELSEIISFEMDDPRVLE-AEVTEVMVSPDSRHASIKIACRGDEKKQ 60 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEER 123 I AL+ A+G++R L ++LR VPEL F D + R+ L+ + Sbjct: 61 NH--AIAALEHAAGYLRRELASRLQLRHVPELHFERDKNPDVESRVDFLLRRARRTKGRE 118 Query: 124 R 124 Sbjct: 119 E 119 >UniRef50_C0GUB2 Ribosome-binding factor A n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUB2_9DELT Length = 109 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 5/104 (4%) Query: 2 AKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 R R+A + +E+ I+ E +DPRL + T++GV M++DL+ A+V T + Sbjct: 3 PATSRRATRMADSIMRELGRIIVEEARDPRLN-LVTITGVLMNKDLSIARVMYTHIQGPS 61 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 + KAL A GF+RS LG+ +++R VPEL F +D L E Sbjct: 62 PE----LEKALGSARGFLRSSLGQNLKMRYVPELRFEWDTYLQE 101 >UniRef50_B1AIV9 Ribosome-binding factor A n=14 Tax=Ureaplasma RepID=RBFA_UREP2 Length = 116 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 5/121 (4%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA E R R+ ++ I L EI D ++ + V+ V +S DL+ AK++ L+ Sbjct: 1 MANEV-RVARLESLIKDVINNALANEIND-KIAKLARVTAVRLSNDLSVAKIF---LDAH 55 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 +++ ++ + + SG +RS L VPEL F D ++ + L + + + Sbjct: 56 KRESMLKVLENVNKVSGLLRSKLAAEWTSYKVPELRFVIDETIDYANHIDELFKKIKQQE 115 Query: 121 E 121 Sbjct: 116 N 116 >UniRef50_B5JHK1 Ribosome-binding factor A n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHK1_9BACT Length = 130 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 3/129 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R RV + +++EI+ IL K + + T++GV++S D A ++ + + + E Sbjct: 2 SNRKIRVGELVRREISDILHTRFKSAAV--LITITGVDVSPDNQNALIFYSVI-ETKEYK 58 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + ++ R LGK + L+ +P LTF +D R++ L+ + + + Sbjct: 59 RRDAQRFFEKNKSMFRRELGKRIILKYLPALTFAFDEKNEAATRVNELIDELDIPEGDVS 118 Query: 125 VNPDDSKED 133 + D D Sbjct: 119 TSEDTENRD 127 >UniRef50_A6KYQ5 Ribosome-binding factor A n=36 Tax=Bacteria RepID=A6KYQ5_BACV8 Length = 111 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 E R ++++ +QKE++ I + K G++ +VS V +S D++ A+VY++ + Sbjct: 2 ETTRQNKISRLIQKELSEIFLLQTK-SMNGVLVSVSAVRISPDMSIARVYLSVFPS---E 57 Query: 64 AVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTS 115 + +K + + IR LG +R LRI+PEL FF D+SL R+ L+ Sbjct: 58 RSQEIVKNINDNMKSIRYELGTRVRHQLRIIPELKFFVDDSLDYAERIDELLKK 111 >UniRef50_Q83ND3 Ribosome-binding factor A n=2 Tax=Tropheryma whipplei RepID=RBFA_TROW8 Length = 196 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 5/119 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 K+ R R+A ++ I+ ++ +++D + T++ V+++ DL +AKV+VT KDE Sbjct: 10 KDQIRAHRMAGRIRHLISRQIETKLRDQL--GLVTITEVQVTGDLHHAKVFVTVYGTKDE 67 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 + +K L++ R LG +++R VP + F D + M L+ + D+ Sbjct: 68 A--QTALKILEDNRANFRRSLG-VLKVRFVPTVEFELDRLFEDAGIMDELIQRARESDK 123 >UniRef50_C6X0X9 Ribosome-binding factor A n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0X9_FLAB3 Length = 120 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 65/114 (57%), Gaps = 5/114 (4%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 E R ++VAQ +Q+++A + +++ D + + TVS V+++ DL+ AKVY++ Sbjct: 2 NESNRQRKVAQIIQQDLAELFRKQASDSKQNFLVTVSDVKITADLSIAKVYLSIFP---P 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVT 114 A +K +++ + R+ +G+ M +RI+P++ F+ D +L + ++ + Sbjct: 59 AVRAAVMKEIEQNTSAYRNFIGQKMGKQVRIIPDVKFYLDTTLDDVEKIEKELK 112 >UniRef50_Q6F193 Ribosome-binding factor A n=1 Tax=Mesoplasma florum RepID=Q6F193_MESFL Length = 116 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA + ++ + +E+ +I++RE+K+ L + +++ V ++ D AK+Y +FL Sbjct: 1 MANHKIKGRK-EATILRELTIIIEREMKNDVLRAL-SIAEVRLTNDSEIAKIYWSFLPLN 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 E + L+E IR L + R VP+L F YD SL R+ ++ V K Sbjct: 59 KEITKELIASELEENKKTIRMKLAHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK 116 >UniRef50_Q7XYI2 Ribosome-binding factor A (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYI2_BIGNA Length = 198 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 13/133 (9%) Query: 6 GRPQRVAQEMQKEIALILQRE----------IKDPRLGMMT--TVSGVEMSRDLAYAKVY 53 R RV +E+Q+E+ +L + D + MT +V+ V+MSRDL+ AK+Y Sbjct: 65 RRIGRVGREIQREMGDLLVNDRNVLAAIDPKYDDDDIRNMTIASVTEVQMSRDLSVAKLY 124 Query: 54 VTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLV 113 + F + + + + L G+IR ++ + + LR PEL F+ DN+L E M ++ Sbjct: 125 LMFSGGT-KKSYQPILDRLNAKKGYIRRVVSQRLNLRRSPELVFYEDNTLNEADEMKRIM 183 Query: 114 TSVVKHDEERRVN 126 + + E R Sbjct: 184 AVLREDREFREKQ 196 >UniRef50_B0SH19 Ribosome-binding factor A n=2 Tax=Leptospira biflexa serovar Patoc RepID=RBFA_LEPBA Length = 149 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Query: 7 RPQRVAQEMQKEIAL-ILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R +++ E+ ++I+ IL+ ++KDPR+ + + +E+S DL YAKVY T L + +E Sbjct: 5 RMKKLESEIIRQISTAILEGKVKDPRV-FLPSFHRIEISEDLKYAKVYFTALCNNNE--R 61 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD--EER 123 K + L +GF+ S +GK +RL P+ TF +DNS ++ + ++ L+ EE Sbjct: 62 KKLTQGLVSCAGFLSSFVGKNLRLHTNPKFTFVWDNSYIKSLEVNRLIDDSAPKTLFEEL 121 Query: 124 RVNPDDSKED 133 NP++ D Sbjct: 122 HPNPEEDDGD 131 >UniRef50_Q4FNM8 Ribosome-binding factor A n=3 Tax=Candidatus Pelagibacter RepID=RBFA_PELUB Length = 122 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 5/116 (4%) Query: 5 FGRPQRVAQEMQKEIALILQR-EIKDPRLGMM-TTVSGVEMSRDLAYAKVYVTFLNDKDE 62 R RV + +++ + +I R E K P L TV+ V+MS+DL AK YV L KD Sbjct: 10 SQRQLRVGEMIRQSLGMIFARNEAKVPNLETNTITVTEVKMSQDLKIAKAYVLPLGGKDS 69 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVK 118 + IK L+E S IR L K + ++ +P++ F D+S ++ NL+ K Sbjct: 70 E---LVIKKLKECSFLIRKALSKKIIMKYLPKILFAKDDSFEYAEKIENLIKQTNK 122 >UniRef50_B2UQQ2 Ribosome-binding factor A n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=RBFA_AKKM8 Length = 125 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 5/129 (3%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R +V + +++EI +QR+ + P G + TV VE++ DL KV+V + Sbjct: 2 SRRTDKVNELLRREIGTTIQRDFEFP--GTIVTVIEVEVTDDLKEGKVWVGVVGKMAPSQ 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 ++ L G I+S + + + LR P LTF D+S G+ + NL+ + K+ + Sbjct: 60 ---VLEKLNSRHGLIQSAVARRVVLRNTPRLTFRLDDSAQRGVDLVNLLEDIDKNLPKAP 116 Query: 125 VNPDDSKED 133 ++ + Sbjct: 117 PADAENDGE 125 >UniRef50_D1AY63 Ribosome-binding factor A n=5 Tax=Fusobacteriaceae RepID=D1AY63_STRM9 Length = 124 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 57/113 (50%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 R + + +E+ + I + E+K+ ++ + TV V +S D YA V ++ L+ K Sbjct: 2 NIRRKRGLEKEISRIIGTAILLEVKNEKIRNLVTVKSVNLSPDARYADVIMSILDYKQNI 61 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 + ++ L + GF R +G+ + +R PE+ D+S+ +++S ++ Sbjct: 62 NKEKLLEELNKLKGFFRKKVGENLEIRYTPEIRIHLDDSVEYSVKISKILKEA 114 >UniRef50_B7IDY7 Ribosome-binding factor A n=1 Tax=Thermosipho africanus TCF52B RepID=RBFA_THEAB Length = 126 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 71/129 (55%), Gaps = 7/129 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMM---TTVSGVEMSRDLAYAKVYVTFL 57 M E+ R +++ +++ IA +Q+ IK+P + +S V +S+D +A V+V+ + Sbjct: 1 MRPEY-RNKKIEAYIRELIAQAIQK-IKEPEFEYLKDYIVISRVLISKDRRFADVFVSVI 58 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + ++ K ++ L++ G+ R+ + K +RL PEL F D + E +R++ L+ ++ Sbjct: 59 GNSEQ--RKKAVELLEKYKGYFRTFVAKNVRLYTAPELRFKEDKGIEESVRINKLLDEIM 116 Query: 118 KHDEERRVN 126 ++E + Sbjct: 117 SKEDENGSD 125 >UniRef50_B5W1W9 Ribosome-binding factor A n=1 Tax=Arthrospira maxima CS-328 RepID=B5W1W9_SPIMA Length = 105 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%) Query: 42 EMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDN 101 + DL +AK++V+ E+A ++ ++ L+ A+G+IRS LGK +RLR PE+ F D Sbjct: 10 KCPGDLQHAKIFVSIYGT--EEARRSTMEGLRSATGYIRSHLGKHIRLRRTPEVVFLEDR 67 Query: 102 SLVEGMRMSNLVTSVVKHDEERRVNPDDSKED 133 SL G ++ L+ + + D ++ED Sbjct: 68 SLERGDKIIELLNQISHEHKNSDTAGDTTQED 99 >UniRef50_C1ZB80 Ribosome-binding factor A n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB80_PLALI Length = 197 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R + +Q + + ++L + R I+DPR+ TV E++ D+ A+V+V+ + E + Sbjct: 2 SRRLAKASQAVLETVSLTIMRHIRDPRVKN-VTVLSAEVAPDMRTARVHVSVMGTPKEQS 60 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERR 124 + + LQ A GF ++ + + R P LTF D + + S + V+ DE Sbjct: 61 L--CMHGLQSACGFFQAKIADRLETRYTPVLTFVLDQGVKLSIETSKALREVLPTDEADS 118 Query: 125 VNPDDS 130 D Sbjct: 119 DEADQE 124 >UniRef50_A8J0V0 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0V0_CHLRE Length = 196 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 15/125 (12%) Query: 1 MAKEFGRPQRVAQEMQKEIALIL------------QREIKDPRLGMMTTVSGVEMSRDLA 48 MA R +VA +Q+EI + +R++ D L + +++ +S DL Sbjct: 62 MAHP-RRVAKVASAIQREIGDMFVSDPVIQAAICPERKLGDDALSAVASITDTYVSNDLQ 120 Query: 49 YAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR 108 KV+V+ +D V ++ LQ ++R L+G+ +RLR+ PE+ F YD++ E Sbjct: 121 VVKVFVSVYSDDYGKRV--AMENLQRLEPYVRRLIGQRVRLRLTPEVRFVYDDAEEEADL 178 Query: 109 MSNLV 113 ++ ++ Sbjct: 179 VARVI 183 >UniRef50_A0M6N1 Ribosome-binding factor A n=13 Tax=Bacteroidetes RepID=RBFA_GRAFK Length = 131 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 10/129 (7%) Query: 3 KEFGRPQRVAQEMQKEIALILQREIKDP-RLGMMTTVSGVEMSRDLAYAKVYVTFLNDKD 61 +E R +++ +QK++A ILQ +++ R G++ +VS V ++ DL+ AK YV+ K Sbjct: 2 EETNRQKKIGGLLQKDLADILQNSLRESGRTGILISVSKVRVTTDLSIAKAYVSIFPSKH 61 Query: 62 EDAVKAGIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKH 119 ++ IK + E I+ + + R LR +P+L+F+ D+SL + + K Sbjct: 62 QE---EVIKEINENKSQIKHEMAQRTRHQLRKMPDLSFYVDDSLEYIDGIEKSI----KG 114 Query: 120 DEERRVNPD 128 E+ NPD Sbjct: 115 KEDPVANPD 123 >UniRef50_Q2S1N8 Ribosome-binding factor A n=1 Tax=Salinibacter ruber DSM 13855 RepID=RBFA_SALRD Length = 132 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 4/127 (3%) Query: 8 PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKA 67 +RVA+ +Q+E+A ILQRE D RL M T++ ++ DL+ A +Y + + D E+ +A Sbjct: 5 TERVAELVQREVARILQREYAD-RLQPMVTITRARVTGDLSIAYLYASVMGDTAEE-REA 62 Query: 68 GIKALQEASGFIRSLLGKAMR--LRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRV 125 + L+ + IR+ L +R +R +PEL FF+D SL E RM NL + + E R Sbjct: 63 TFRQLESLADEIRNQLASRIRHKVREIPELKFFHDESLEEAKRMENLFDRIREERERRLE 122 Query: 126 NPDDSKE 132 + +DS + Sbjct: 123 DGEDSAD 129 >UniRef50_B0VFC2 Putative ribosome-binding factor A (RbfA-like) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFC2_9BACT Length = 161 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 3/114 (2%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 + R R+ E++K + L +++ DP+L ++ V +S+DL YAK+Y + + Sbjct: 2 KNYRIPRLQAELKKLFNIALSQKLNDPKL-AWVQITDVVISKDLHYAKLYFSHY--NNPA 58 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + + L ++SGF++ + A +R +PEL+F+YD++ ++ L+ S+ Sbjct: 59 SHDQIRELLIKSSGFLKKQIAGAQIMRTIPELSFYYDDTEDRAAKVDTLLASLR 112 >UniRef50_D2R7W9 Ribosome-binding factor A n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7W9_9PLAN Length = 165 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R + + +++ +++ + EI+DPR+ TV VEM+ D+ AK+ V+ + DE Sbjct: 3 SRRILKAQEAIREVVSMAILTEIRDPRVRD-VTVVKVEMTPDMRAAKIMVSVMG--DEQR 59 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV 116 K + LQ ++GF++ + + R P+LTF D + + + ++ V Sbjct: 60 EKLTVLGLQNSAGFLQKRIADEIDTRYTPKLTFEIDRGVKNSLEVLRILKEV 111 >UniRef50_C1F438 Ribosome-binding factor A n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F438_ACIC5 Length = 123 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Query: 1 MAKEFGR---PQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFL 57 M ++ R RVA+ +++EI +L+ E+ DPR+ VS V ++ A+V+V Sbjct: 1 MPEQRARKYHQDRVAETLREEIGAMLEGELSDPRIS-FAHVSQVILNPGGKSAQVWVAVD 59 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 + + ++ L A G+IR L + R VPELTF D S R+ L+ Sbjct: 60 GGNEAEEQ--TVQGLMAARGYIRHELLERTGKRRVPELTFHVDRSDRMKARIDELLGRSQ 117 Query: 118 KHDEE 122 K Sbjct: 118 KKRRN 122 >UniRef50_A3VQI0 Ribosome-binding factor A n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQI0_9PROT Length = 106 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 5/109 (4%) Query: 14 EMQKEIALILQREIKDPRL--GMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKA 71 ++ +A + QRE T++ V +S DL A V+ + L +D + Sbjct: 1 MIRHALAEMFQREEIHEEAFPTTPVTITEVRVSPDLKSATVFCSALG---KDVFDEEVAQ 57 Query: 72 LQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 L SG IR +LG+ + ++ P L F D + E R++ L+ + D Sbjct: 58 LNAISGAIRQVLGRKITMKYTPSLKFLPDETFEEAARINALLKETRRVD 106 >UniRef50_D1N2Z1 Ribosome-binding factor A n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2Z1_9BACT Length = 121 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 2/123 (1%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 MA++ R RV + +++EIA ++R + GM+ +V+ V S DL A VYV+ Sbjct: 1 MAEKVDRLTRVNELLKREIANAIERGLITAP-GMLVSVTEVNTSVDLRNATVYVSIFGG- 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 D A + + L E + L + + + P L F D + +G R+ L+ V H+ Sbjct: 59 DNAARRKVMNELGEQRLDFQRKLARTLAFKHTPVLDFRLDTRIEKGDRVFELLNEVENHN 118 Query: 121 EER 123 + Sbjct: 119 KHE 121 >UniRef50_A5IZH0 Ribosome-binding factor A n=1 Tax=Mycoplasma agalactiae PG2 RepID=RBFA_MYCAP Length = 113 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 7/120 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M K R +++ I+ I+ E+ + + TV+ V +S DL + KV++ F + + Sbjct: 1 MKKSIS-VLRKESQIKNFISTIITNELTNANI-YNPTVTDVVLSTDLGHVKVFLAFSSKE 58 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + G+ A++ ASG+IR L K + R VPEL F+ D + + ++ S+ + Sbjct: 59 N-----DGLDAVKNASGYIRKRLSKTLNWRKVPELHFYIDEVEKKAFEIDQILNSLKNEE 113 >UniRef50_Q98PP7 Ribosome-binding factor A n=1 Tax=Mycoplasma pulmonis RepID=RBFA_MYCPU Length = 112 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 65/117 (55%), Gaps = 6/117 (5%) Query: 4 EFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDED 63 + + ++ Q++ I+ I+ E+++ + ++TTV G+++S DL++ VYVTF Sbjct: 2 QNIKLEKREQDILINISRIISEEVQNLK-DVLTTVVGIKLSSDLSHCNVYVTF-----SK 55 Query: 64 AVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 K ++ L +ASG+I+ L ++ R +P L F D++ + +++ ++ + K Sbjct: 56 NSKKNLERLNQASGYIKKQLSSILKWRKIPSLHFKIDDTFEKSLKIEQILEEIKKEK 112 >UniRef50_A6LN42 Ribosome-binding factor A n=1 Tax=Thermosipho melanesiensis BI429 RepID=RBFA_THEM4 Length = 125 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 70/125 (56%), Gaps = 7/125 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMM---TTVSGVEMSRDLAYAKVYVTFL 57 M E+ R +++ +++ I+ LQ+ IK P + + +S V +S+D +A V+V+++ Sbjct: 1 MNPEY-RNKKIENKIRGLISEGLQK-IKVPEIDALKSYIVISRVLVSKDKRFADVFVSYI 58 Query: 58 NDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 D D + K ++ L++ GF R + + +R+ PEL F D + E +R++ L+ + Sbjct: 59 GDAD--SRKRAVELLEKYKGFFRKYIAQNLRIYTTPELRFKEDIGIEESIRINKLLDEIS 116 Query: 118 KHDEE 122 K+++ Sbjct: 117 KNNKN 121 >UniRef50_A8EYY5 Ribosome-binding factor A n=15 Tax=Rickettsia RepID=RBFA_RICCK Length = 129 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 8/131 (6%) Query: 1 MAK----EFGRPQRVAQEMQKEIALILQR-EIKDPRL-GMMTTVSGVEMSRDLAYAKVYV 54 M K R Q++A + + + IL+R ++ D RL ++ V ++ DL A Y Sbjct: 1 MKKLTKTNAHRQQKLASIINEVLIEILRRGKMLDIRLFNCPLAITKVIVTADLKIANCY- 59 Query: 55 TFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT 114 FL + + + AL + IR+ + + ++ PE+ F YD+ +++ L+ Sbjct: 60 -FLPFNTKLTIDDIMDALNNSKNAIRNFVTNKINMKFSPEIRFHYDHGFDNAIKVEKLLK 118 Query: 115 SVVKHDEERRV 125 ++ ++ Sbjct: 119 NISLKRRDKDK 129 >UniRef50_C6C0D1 Ribosome-binding factor A n=2 Tax=Desulfovibrio RepID=C6C0D1_DESAD Length = 117 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 3/101 (2%) Query: 5 FGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDA 64 R ++ ++ +EIA +L EI DPRL M ++SGV M++D A+V T D++ Sbjct: 6 SRRSVKMGDQIMREIATMLIEEIGDPRLE-MVSISGVRMNKDNKIAEVMFTMAG--DKEK 62 Query: 65 VKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVE 105 + A +KAL +A G++RS L K +R+R +PEL F +DN L E Sbjct: 63 IAAAVKALDKAKGYMRSKLSKRIRVRQIPELRFVHDNFLEE 103 >UniRef50_Q8SXX0 CG15916 n=3 Tax=melanogaster subgroup RepID=Q8SXX0_DROME Length = 271 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 50/133 (37%), Gaps = 4/133 (3%) Query: 2 AKEFGRPQRVAQEMQKEIALILQRE-IKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 + R + + I IL + D +G +S V+++ D + VY + Sbjct: 90 SHNNRRMSVLNKLFMTNITDILATGAVADSIVGHGVQISYVKITSDFSRINVYWMGKDGG 149 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + ++ L SG ++ L + + VP++ F D + ++ +++ + Sbjct: 150 ENQELENT---LNRMSGKLQHELSQLHLMGEVPKIKFVRDKTSTGLHQVHEVLSKIDLQH 206 Query: 121 EERRVNPDDSKED 133 N + + D Sbjct: 207 SYSSSNAEVEESD 219 >UniRef50_B4JNV4 GH24894 n=4 Tax=Drosophila RepID=B4JNV4_DROGR Length = 410 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 5/135 (3%) Query: 2 AKEFGRPQRVAQEMQKEIALILQR-EIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 + R + + I +L + + LG VS V++S D A VY Sbjct: 105 KQNTRRMSVLNKLFMTSITDLLATGQAAESVLGRSLQVSRVKISSDFACINVYWLGTGQV 164 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSV--VK 118 DAV LQ +G +R L + + VP L F D S + ++ ++ Sbjct: 165 ASDAVLEV--QLQRCTGQLRHELSQLRLMGEVPRLRFVRDKSGSNSNSIEAILRNINLNS 222 Query: 119 HDEERRVNPDDSKED 133 +E + +E+ Sbjct: 223 PKQEEADQEEADQEE 237 >UniRef50_Q8EWT9 Ribosome-binding factor A n=1 Tax=Mycoplasma penetrans RepID=RBFA_MYCPE Length = 116 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 5/118 (4%) Query: 1 MAKEFG-RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLND 59 M + +R ++ I+ + + D + TV V +S+D + AKVY++ Sbjct: 1 MKHMSNVKIERYESIIKDLISHAITTLVYDDLIKQ-ATVHYVTLSKDKSIAKVYISCY-- 57 Query: 60 KDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 D+ + +K + ASGF R++L K + LR P + F D S+ + +++L+ + Sbjct: 58 -DKTIIDKILKKINGASGFFRTILAKNLNLRKAPAIVFLNDESIDKIDEINSLLEQIK 114 >UniRef50_Q5PAJ6 Ribosome-binding factor A n=4 Tax=Anaplasma RepID=RBFA_ANAMM Length = 117 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVK 66 R +VA +++ +A + RE D L M ++SGV++S D A V+V Sbjct: 11 RSLKVASVLKRALAQLFIREFYD--LSSMLSISGVKVSEDTRNATVFVAI--GDKSVDGD 66 Query: 67 AGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVT 114 + AL +AS IR + + ++LR VP L F D +R+S ++ Sbjct: 67 EVVAALNDASNSIRRAVFRYLKLRYVPRLHFKLDVEFDNFLRISEIMA 114 >UniRef50_Q7MQU1 Ribosome-binding factor A n=1 Tax=Wolinella succinogenes RepID=RBFA_WOLSU Length = 119 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 3/122 (2%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M ++ + QR +++ I L + D RL + V V+ S+ +A+VY+ Sbjct: 1 MKEKSVKLQRTESLLKEVIPEALST-LSDTRLNSL-GVVEVDCSKGKYHAEVYLDA-PFA 57 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + + ++ L+ A G IR A P F +D+S + R+ + + K Sbjct: 58 TPEEKREILRQLRLAEGTIRDHCLSATGWFKCPRFHFNFDDSTDKANRLDAIFEQLKKER 117 Query: 121 EE 122 E Sbjct: 118 ES 119 >UniRef50_Q1NKW1 Ribosome-binding factor A n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKW1_9DELT Length = 131 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Query: 11 VAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIK 70 VA E+++E+A +L ++KDPR+ T+ ++ DL A++Y + L+D +A Sbjct: 29 VADEIRQEVATLLLAKVKDPRVEQ-VTILKATVTADLRQARIYYSVLHD---EAAADAAA 84 Query: 71 ALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVV 117 L+ A FIR L K + LR+VP L F D SL + + L+ + Sbjct: 85 GLESARSFIRRSLAKNLVLRVVPALIFERDRSLADQQHLEQLLAEIQ 131 >UniRef50_A9BI93 Ribosome-binding factor A n=1 Tax=Petrotoga mobilis SJ95 RepID=RBFA_PETMO Length = 117 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Query: 7 RPQRVAQEMQKEIALILQREIKDPRLGM-MTTVSGVEMSRDLAYAKVYVTFLNDKDEDAV 65 R + + EM+K I ++KDPRL ++ V +S+D +Y VYV+ L ++ + Sbjct: 5 RREMLESEMKKLITQGFS-QLKDPRLKDKFIDINMVRLSKDKSYLDVYVSSL----DEDI 59 Query: 66 KAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDE 121 I L A G R+L+ K +++ VPE+ F D + +R++ L+ + K++E Sbjct: 60 DTIINILNNAKGMFRTLIAKNIKMFKVPEVRFHKDEGIEASIRINKLIEKIEKNEE 115 >UniRef50_A6GW80 Ribosome-binding factor A n=12 Tax=Bacteroidetes RepID=RBFA_FLAPJ Length = 130 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 6/124 (4%) Query: 4 EFGRPQRVAQEMQKEIALILQREI-KDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDE 62 E R +++ +QK++ ILQ EI K+ ++ +VS V ++ DL A+VY++ + Sbjct: 2 ETNRQKKIGGVIQKDLVDILQGEIRKNGISNLVISVSKVSVTTDLGVARVYLSVFP---Q 58 Query: 63 DAVKAGIKALQEASGFIRSLLGKAMRL--RIVPELTFFYDNSLVEGMRMSNLVTSVVKHD 120 + +++++ I+ L + +RL R VP L F+ D+SL ++ N + Sbjct: 59 EKAPEILESIKSNMYLIKHDLSQRVRLQLRKVPNLAFYIDDSLDYIEKIDNALAGKENPI 118 Query: 121 EERR 124 E R Sbjct: 119 ENRD 122 >UniRef50_B3ER34 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ER34_AMOA5 Length = 125 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 6/116 (5%) Query: 1 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK 60 M + Q+ + + + + I E+ + ++ TV+ + + KVYV+F+ + Sbjct: 1 MNDSVKKMQK-SSIILRNLREIFLHELANSFGNILVTVTSLYICDKTRVVKVYVSFMPSQ 59 Query: 61 DEDAVKAGIKALQEASGFIRSLLGKAM--RLRIVPELTFFYDNSLVEGMRMSNLVT 114 + + IK L++ IR LLGK + +LR +PEL F DNS+ + L+ Sbjct: 60 NGPRM---IKELEKHKSKIRGLLGKRLANKLRSIPELKFHLDNSIERAYHIEKLLN 112 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.178 0.504 Lambda K H 0.267 0.0548 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,077,199,461 Number of Sequences: 3077464 Number of extensions: 58018011 Number of successful extensions: 201779 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 777 Number of HSP's successfully gapped in prelim test: 199 Number of HSP's that attempted gapping in prelim test: 199549 Number of HSP's gapped (non-prelim): 999 length of query: 133 length of database: 1,040,396,356 effective HSP length: 98 effective length of query: 35 effective length of database: 738,804,884 effective search space: 25858170940 effective search space used: 25858170940 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.7 bits) S2: 88 (38.1 bits)