69 c1nijA_ Probab=98.97   E-value=3.3e-09  Score=69.33  Aligned_columns=107  Identities=20%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEEEECCCC
Q ss_conf             88447999878989888999999974042178046614340005532100247887503421000036623677524887
Q batch____         5 TMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPD   84 (175)
Q Consensus         5 ~~~pvv~ivG~nGsGKTTLl~~l~~~l~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (175)
                      .++||+.|.|+-|||||||++.++..  +++.++.++.+|..+...+....      ...........+.+.||  ....
T Consensus         1 ~~ipv~iitGfLGaGKTTll~~ll~~--~~~~~~avi~Nefg~~~iD~~ll------~~~~~~v~~l~~GCiCC--~~~~   70 (317)
T c1nijA_           1 NPIAVTLLTGFLGAGKTTLLRHILNE--QHGYKIAVIENEFGEVSVDDQLI------GDRATQIKTLTNGCICC--SRSN   70 (317)
T ss_dssp             CCEEEEEEEESSSSSCHHHHHHHHHS--CCCCCEEEECSSCCSCCEEEEEE------CTTSCEEEEETTSCEEE--CTTS
T ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHC--CCCCEEEEEEECCCCCCHHHHHH------HHCCCEEEEECCCCEEC--CCHH
T ss_conf             97618998089888988999999842--69973899971664442058898------40797299977995421--3247


Q ss_pred             CHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             5079999999863--843633123101232489889999
Q batch____        85 EEELDLQFLASRM--DTSKLDLILVEGFKHEEIAKIVLF  121 (175)
Q Consensus        85 ~~~~~l~~~~~~~--~~~~~~~~~~e~ls~g~~~~i~~~  121 (175)
                      +....+..+.++.  ....+|..++|.-..+...-+.-+
T Consensus        71 ~~~~~l~~l~~~~~~~~~~~d~i~IE~sG~a~p~~i~~~  109 (317)
T c1nijA_          71 ELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQT  109 (317)
T ss_dssp             CHHHHHHHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
T ss_conf             789999999984125546866899808875798999988