89 c1sxjE_ Probab=98.70   E-value=1e-06  Score=59.64  Aligned_columns=193  Identities=20%

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHH---CCCCCCCCCCEEEEEHHHCCHHHHHHHHCCCC
Q ss_conf             217979999999999973068984899779989789999999971---55431136975996510099779888760657
Q batch____       187 ATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRILEL---KQARHQFSGAFVEVNCATLRGDTAMSTLFGHV  263 (532)
Q Consensus       187 i~~~~~~~~~~~~~~~~a~~~~~p~~~~g~~g~gk~~~a~~~h~~---s~~~~r~~~pfv~v~c~~l~~~~~~~~lfg~~  263 (532)
                      +.|.....+.+.+...-. .....+|++||||||||.+|+++...   .........-.....+..........+++...
T Consensus        13 iig~~~~~~~l~~~i~~~-~~~~~lLl~GppG~GKT~la~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (317)
T c1sxjE_          13 LSHNEELTNFLKSLSDQP-RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRNVVSSPYHLEITPSNDRIVIQELLKEV   91 (317)
T ss_dssp             CCSCHHHHHHHHTTTTCT-TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCCCCEECSSEEEECCCCCHHHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHCC-CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
T ss_conf             129589999999999858-9985699977978998999999999958986423100010121035442168999888888


Q ss_pred             CCCCCCCCCCCCCCEEECCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEEEECCCCHHHHHHCCCC
Q ss_conf             67677876567671002589989981547888999999999985195877799856885214786238898999876996
Q batch____       264 KGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKF  343 (532)
Q Consensus       264 ~~~~~g~~~~~~g~l~~A~gGtL~ldei~~l~~~~q~~Ll~~l~~~~~~r~g~~~~~~~~vrii~at~~~l~~~~~~g~f  343 (532)
                      .             ........+++||++.+....|..+++.+++..           .++.++.+++.       ...+
T Consensus        92 ~-------------~~~~~~~ii~~de~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-------~~~~  140 (317)
T c1sxjE_          92 A-------------QMEQRYKCVIINEANSLTKDAQAALRRTMEKYS-----------KNIRLIMVCDS-------MSPI  140 (317)
T ss_dssp             T-------------TTTCCCEEEEEECTTSSCHHHHHHHHHHHHHST-----------TTEEEEEEESC-------SCSS
T ss_pred             H-------------HCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCC-----------CCEEEEEECCC-------HHHC
T ss_conf             6-------------214586089721201269787667765311366-----------84289762255-------4534


Q ss_pred             CHHHHHHCCEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             34788603735885073243877599999999999999708799779899999982688733889981799999999999
Q batch____       344 REDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVTRMA  423 (532)
Q Consensus       344 ~~dL~~rl~~~~i~iPpLreR~eDi~~L~~~~l~~~~~~~~~~~~~s~~a~~~l~a~~~l~~~~WPGNvrEL~~~i~~~~  423 (532)
                      .+.+..|...+.+.-|+-.+        +..++...+...+...............        +.||+|..-+.++...
T Consensus       141 ~~~~~sr~~~~~~~~~~~~~--------i~~~l~~~~~~~~~~~~~~~~~~~i~~~--------~~gd~r~al~~l~~~~  204 (317)
T c1sxjE_         141 IAPIKSQCLLIRCPAPSDSE--------ISTILSDVVTNERIQLETKDILKRIAQA--------SNGNLRVSLLMLESMA  204 (317)
T ss_dssp             CHHHHTTSEEEECCCCCHHH--------HHHHHHHHHHHHTCEECCSHHHHHHHHH--------HTTCHHHHHHHHTHHH
T ss_pred             CCHHHCCCEEEEECCCCHHH--------HHHHHHHHHHHHCCCCCHHHHHHHHHHH--------HCCCHHHHHHHHHHHH
T ss_conf             41431543177416899899--------9999999998608785559999999997--------0999899999999998


Q ss_pred             HHCC
Q ss_conf             8558
Q batch____       424 TFAT  427 (532)
Q Consensus       424 ~~~~  427 (532)
                      ....
T Consensus       205 ~~~~  208 (317)
T c1sxjE_         205 LNNE  208 (317)
T ss_dssp             HTTT
T ss_pred             HCCC
T ss_conf             4488