16 c1in8A_ Probab=99.80   E-value=2.3e-16  Score=119.14  Aligned_columns=257  Identities=18%

Q ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC--EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCHHHHHH
Q ss_conf             2210650217979999999999973068984--89977998978999999997155431136975996510099779888
Q batch____       180 DFLKSGIATRNPHFNRMIEQIEKVAIKSRAP--ILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMS  257 (532)
Q Consensus       180 ~~~~~~ii~~~~~~~~~~~~~~~~a~~~~~p--~~~~g~~g~gk~~~a~~~h~~s~~~~r~~~pfv~v~c~~l~~~~~~~  257 (532)
                      ....++++|++....++...+.........|  |+|+||+|||||++|+.||...      +.+|+.++|..........
T Consensus         5 p~~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l------~~~~~~i~~~~~~~~~~~~   78 (298)
T c1in8A_           5 PKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL------QTNIHVTSGPVLVKQGDMA   78 (298)
T ss_dssp             CSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH------TCCEEEEETTTCCSHHHHH
T ss_pred             CCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC------CCCEEEEECCCCCCCHHHH
T ss_conf             9997781270999999999999986338888857998698898889999999970------9979999415533201245


Q ss_pred             HHCCCCCCCCCCCCCCCCCCEEECCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEEEECCCCHHHH
Q ss_conf             76065767677876567671002589989981547888999999999985195877799856885214786238898999
Q batch____       258 TLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQL  337 (532)
Q Consensus       258 ~lfg~~~~~~~g~~~~~~g~l~~A~gGtL~ldei~~l~~~~q~~Ll~~l~~~~~~r~g~~~~~~~~vrii~at~~~l~~~  337 (532)
                      ..+                 ....+++++|+||++.++.+.|..|+..+++..       ......+.++.....+....
T Consensus        79 ~~~-----------------~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~  134 (298)
T c1in8A_          79 AIL-----------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQ-------IDIQPFTLVGATVRSGLLSS  134 (298)
T ss_dssp             HHH-----------------HTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSC-------CCCCCCEEEEEESCGGGSCH
T ss_pred             HHH-----------------HHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCC-------CCCCEEEECCCCCCHHHCCC
T ss_conf             668-----------------851379989994236769899999999970553-------34440665265458563146


Q ss_pred             HHCCCCCHHHHHHCCEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf             87699634788603735885073243877599999999999999708799779899999982688733889981799999
Q batch____       338 VAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSA  417 (532)
Q Consensus       338 ~~~g~f~~dL~~rl~~~~i~iPpLreR~eDi~~L~~~~l~~~~~~~~~~~~~s~~a~~~l~a~~~l~~~~WPGNvrEL~~  417 (532)
                      .....|         ...+.+++...  +++..+...++.+      ..+.++.++...+...       |+||+|++.+
T Consensus       135 ~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~i~~~-------~~g~~R~~~~  190 (298)
T c1in8A_         135 PLRSRF---------GIILELDFYTV--KELKEIIKRAASL------MDVEIEDAAAEMIAKR-------SRGTPRIAIR  190 (298)
T ss_dssp             HHHTTC---------SEEEECCCCCH--HHHHHHHHHHHHH------TTCCBCHHHHHHHHHT-------STTCHHHHHH
T ss_pred             HHHHHH---------HHHCCCCCCCH--HHHHHHHHHHHHH------CCCCCCHHHHHHHHHH-------CCCCHHHHHH
T ss_conf             433234---------43113678989--9999999999998------2985588999999998-------3999899999


Q ss_pred             HHHHHHHHCC---CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999998558---9820588821664201244445663333334544433224434356899999999999999999858
Q batch____       418 SVTRMATFAT---SGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQL  494 (532)
Q Consensus       418 ~i~~~~~~~~---~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~e~~~i~~al~~~~  494 (532)
                      ++++++..+.   ...|+.+++...+.........                            ....+...+........
T Consensus       191 ll~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~  242 (298)
T c1in8A_         191 LTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEG----------------------------LDEFDRKILKTIIEIYR  242 (298)
T ss_dssp             HHHHHHHHHHHHTCSSBCHHHHHHHHHHHTCCTTC----------------------------CCHHHHHHHHHHHHHST
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH----------------------------HHHHHHHHHHHHHHHHC
T ss_conf             99999999985298876989999999751255101----------------------------11468999999999817


Q ss_pred             CC---HHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             94---7899988489978999999981
Q batch____       495 FD---VSRQGKASVNDADRLRKYLARF  518 (532)
Q Consensus       495 Gn---~~~aA~~LGisR~tL~rkl~~~  518 (532)
                      ++   ....|+.||++..++..+++.|
T Consensus       243 ~~~~~~~~ia~~l~~~~~~~~~~~~~~  269 (298)
T c1in8A_         243 GGPVGLNALAASLGVEADTLSEVYEPY  269 (298)
T ss_dssp             TCCBCHHHHHHHHTSCHHHHHHTTHHH
T ss_pred             CCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             695479999998599989999997657