BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (117 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AAQ8 Uncharacterized protein ybaA n=88 Tax=Proteobact... 236 1e-61 UniRef50_A4W7D3 Putative uncharacterized protein n=6 Tax=Proteob... 207 8e-53 UniRef50_Q09D57 RNA signal recognition particle 4.5S RNA n=3 Tax... 175 4e-43 UniRef50_D0M1S9 RNA signal recognition particle 4.5S RNA n=6 Tax... 150 1e-35 UniRef50_D0CZN0 Response regulator receiver domain protein n=5 T... 129 4e-29 UniRef50_B6ITX3 Putative uncharacterized protein n=3 Tax=Proteob... 128 5e-29 UniRef50_Q3BW04 Putative uncharacterized protein n=4 Tax=Proteob... 128 7e-29 UniRef50_Q0C3F1 Putative uncharacterized protein n=3 Tax=Proteob... 125 4e-28 UniRef50_C3MFG6 RNA signal recognition particle 4.5S RNA n=12 Ta... 123 2e-27 UniRef50_A6UBM2 Putative uncharacterized protein n=13 Tax=Proteo... 122 3e-27 UniRef50_A4A908 Protein containing DUF1428 n=19 Tax=Proteobacter... 122 4e-27 UniRef50_B6JDI6 RNA signal recognition particle 4.5S RNA n=11 Ta... 119 3e-26 UniRef50_Q8Q0W8 RNA signal recognition particle 4.5S RNA n=2 Tax... 110 1e-23 UniRef50_Q2NCG7 Putative uncharacterized protein n=1 Tax=Erythro... 104 1e-21 UniRef50_Q89LX7 Blr4416 protein n=3 Tax=Alphaproteobacteria RepI... 104 1e-21 UniRef50_B9R092 Putative uncharacterized protein n=1 Tax=Labrenz... 101 6e-21 UniRef50_A9IUP3 Putative uncharacterized protein n=1 Tax=Bordete... 100 1e-20 UniRef50_D2S2U1 Putative uncharacterized protein n=10 Tax=cellul... 97 1e-19 UniRef50_Q28SF7 Putative uncharacterized protein n=1 Tax=Jannasc... 95 7e-19 UniRef50_B3PD68 Putative uncharacterized protein n=1 Tax=Cellvib... 92 5e-18 UniRef50_A6UL99 Putative uncharacterized protein n=1 Tax=Sinorhi... 88 6e-17 UniRef50_D2R596 Putative uncharacterized protein n=1 Tax=Pirellu... 86 3e-16 UniRef50_A9WHX6 Putative uncharacterized protein n=2 Tax=Chlorof... 75 8e-13 UniRef50_A3WDZ7 Putative uncharacterized protein n=1 Tax=Erythro... 74 1e-12 UniRef50_C7NJF5 Putative uncharacterized protein n=1 Tax=Kytococ... 48 8e-05 UniRef50_Q7SXW8 Acetylserotonin O-methyltransferase-like n=8 Tax... 40 0.017 >UniRef50_P0AAQ8 Uncharacterized protein ybaA n=88 Tax=Proteobacteria RepID=YBAA_ECO57 Length = 117 Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA Sbjct: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE Sbjct: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 >UniRef50_A4W7D3 Putative uncharacterized protein n=6 Tax=Proteobacteria RepID=A4W7D3_ENT38 Length = 117 Score = 207 bits (527), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 100/117 (85%), Positives = 109/117 (93%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 MKYVDGFVVAVPA K+AYREMAAKAAPLFKEFGA R+VECWA DVPDGK+TDFRMAVKA Sbjct: 1 MKYVDGFVVAVPAANKEAYREMAAKAAPLFKEFGATRVVECWAEDVPDGKLTDFRMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 EE EEVVFSWIEYPSKEVRD AN+K+MSDPRMKE+G+SMPFDGKRMIYGGF ++DE Sbjct: 61 EEGEEVVFSWIEYPSKEVRDEANKKLMSDPRMKEWGDSMPFDGKRMIYGGFMPLLDE 117 >UniRef50_Q09D57 RNA signal recognition particle 4.5S RNA n=3 Tax=Proteobacteria RepID=Q09D57_STIAU Length = 116 Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 81/116 (69%), Positives = 95/116 (81%), Gaps = 1/116 (0%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV+ VP KDAYREMA+KA LFKE+GALR+VECW +DVP+GKVTDF+ AVKA Sbjct: 1 MSYIDGFVIPVPVTNKDAYREMASKALTLFKEYGALRVVECWGNDVPNGKVTDFKGAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 E E VVFSW+E+PSK RDA NQKMM DPRMK E MPFDG+RMI+GGFE ++D Sbjct: 61 EPTETVVFSWVEWPSKAARDAGNQKMMEDPRMKSI-EGMPFDGQRMIFGGFEVLLD 115 >UniRef50_D0M1S9 RNA signal recognition particle 4.5S RNA n=6 Tax=Proteobacteria RepID=D0M1S9_VIBSE Length = 117 Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 68/117 (58%), Positives = 88/117 (75%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV AVP K+ Y A AA +F+EFGAL+++E W S+VPDG++T F MAVKA Sbjct: 1 MSYIDGFVAAVPTANKEKYIAHAKIAAEMFREFGALKVIETWGSEVPDGEITSFPMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 E NE VVFSW+ +PSKEVRD+ Q++M DPRM MPFDGKR+IYGGF+ I+++ Sbjct: 61 ESNETVVFSWVVWPSKEVRDSGWQRIMGDPRMSPENNPMPFDGKRLIYGGFDVILEQ 117 >UniRef50_D0CZN0 Response regulator receiver domain protein n=5 Tax=Alphaproteobacteria RepID=D0CZN0_9RHOB Length = 115 Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 2/116 (1%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YV GF+ VP KDAY A K+ PLFKE+GA + ECW +DVPDG+VT F MAVK Sbjct: 1 MSYVSGFLTPVPGKNKDAYLASAQKSWPLFKEYGATAMRECWEADVPDGEVTSFPMAVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 E+ E VVFSWI +P K DA M +DPR +E MPFDGKRMI+G F+++ + Sbjct: 61 EDGEAVVFSWILWPDKATADACWASMETDPRWREM--DMPFDGKRMIFGNFKTLFE 114 >UniRef50_B6ITX3 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=B6ITX3_RHOCS Length = 136 Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/114 (56%), Positives = 79/114 (69%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 YVDGFV+AVP K DAY +A AA ++KE GAL EC DVP G +T F AV+A Sbjct: 21 TYVDGFVLAVPRAKLDAYTALARTAAEVWKEHGALAYAECIGDDVPYGTLTSFPRAVQAT 80 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 ++E VVFSWI Y S+E RDA N K+M DPR+K + MPFDG+RMI+GGF + I Sbjct: 81 DDEVVVFSWIVYASREERDAINAKVMQDPRLKGSVDDMPFDGRRMIHGGFRTFI 134 >UniRef50_Q3BW04 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=Q3BW04_XANC5 Length = 165 Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 62/115 (53%), Positives = 74/115 (64%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV+AVP K+A+ A + E+GALR+VECW DV G+ TDF AV A Sbjct: 45 MSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQPGQWTDFYRAVDA 104 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 E VVFSWIE+P K RD +KMM DPRM MPFDGKRM+YGGF I+ Sbjct: 105 TAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIV 159 >UniRef50_Q0C3F1 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q0C3F1_HYPNA Length = 238 Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YV GF++AVP KDAYR+ A +A P+FK +GA+ +VE W DVP GKV AVK Sbjct: 1 MTYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 + +E +FSW+ +P K+ D A QKMM+D KEF E MPFDGKRMI GGFE+I+ Sbjct: 61 KPDETAMFSWVVWPDKKTSDEAEQKMMADMEGKEFPE-MPFDGKRMIVGGFETIV 114 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+DG V+ VPADK+ AY + K A LF+EFGA+ +V+ W ++P+GKV DF A + Sbjct: 123 YIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVDAWGDNLPEGKVNDFHTATLRKP 182 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFG-ESMPFDGKRMIYGGFESIID 116 E VVFSWI + K RDA +K+M DPRM+EFG ++ D RMI+G F ++D Sbjct: 183 EEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVD 237 >UniRef50_C3MFG6 RNA signal recognition particle 4.5S RNA n=12 Tax=Proteobacteria RepID=C3MFG6_RHISN Length = 117 Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/116 (52%), Positives = 83/116 (71%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF+VA+P +AY+++A KA ++KE GAL VEC DVP G++T F AV+A Sbjct: 1 MTYVDGFLVALPKQNIEAYKDLARKAGEVWKEHGALNYVECLGDDVPYGELTSFPRAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 +E+E VVFSW+ Y S++ RDA K+M+DPR++ FDGKRMIYGGFES ++ Sbjct: 61 KEDETVVFSWVVYRSRQDRDAIVAKVMADPRLQGDEWKSIFDGKRMIYGGFESFLE 116 >UniRef50_A6UBM2 Putative uncharacterized protein n=13 Tax=Proteobacteria RepID=A6UBM2_SINMW Length = 117 Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 60/116 (51%), Positives = 83/116 (71%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF+VAVP +AY++MA++A ++KE GAL VEC DVP G++T F AV+A Sbjct: 1 MAYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VVFSWI Y S++ RDA K+M+DPR++ FDGKR+IYGGFE+ ++ Sbjct: 61 TDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLE 116 >UniRef50_A4A908 Protein containing DUF1428 n=19 Tax=Proteobacteria RepID=A4A908_9GAMM Length = 121 Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 4/120 (3%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DG+++AVP + Y + A + +F E GA R+V+CW DVP+G TD R AV+A Sbjct: 1 MSYIDGYLIAVPTANEQKYIDYAQSSDSIFIEMGATRVVQCWGDDVPEGSTTDMRKAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDP----RMKEFGESMPFDGKRMIYGGFESIID 116 +E +VF+W+E+P K+ R+AA MMSD R+ MPFDG R+IYGGF+ I++ Sbjct: 61 TADESIVFAWVEWPDKDTREAAMATMMSDTFEDDRLNTQKNPMPFDGSRLIYGGFKRIVE 120 >UniRef50_B6JDI6 RNA signal recognition particle 4.5S RNA n=11 Tax=Bacteria RepID=B6JDI6_OLICO Length = 119 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/117 (51%), Positives = 77/117 (65%), Gaps = 2/117 (1%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M+YVDGF+V VP AYR +A KA +++E GAL EC A DV GK T F +VK Sbjct: 1 MQYVDGFIVPVPKKNLTAYRALARKAGKIWREHGALDYRECVAEDVKMGKQTSFPRSVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEF--GESMPFDGKRMIYGGFESII 115 + NE VV SWI Y S+ RD N K+M DPR+ +++PFDGKRMIYGGFE+++ Sbjct: 61 KPNETVVLSWIVYKSRAHRDRVNAKVMKDPRLTGMIDPKALPFDGKRMIYGGFETLV 117 >UniRef50_Q8Q0W8 RNA signal recognition particle 4.5S RNA n=2 Tax=cellular organisms RepID=Q8Q0W8_METMA Length = 121 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 53/117 (45%), Positives = 77/117 (65%), Gaps = 3/117 (2%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 KYVDGF++ + DK + YRE+A K++ ++K+ GAL EC D+ ++ F+ V A Sbjct: 3 KYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVNAS 62 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMP---FDGKRMIYGGFESII 115 E E V+FSWI Y SKE RD N+ +M+DPRMKE E+ FD +RM YGGF++++ Sbjct: 63 EEETVIFSWIVYESKEQRDKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLV 119 >UniRef50_Q2NCG7 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NCG7_ERYLH Length = 118 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+ GF+V V + KKDAY MA A +F+ +GA+ IVE + D+P+GK TDFR AVKAE+ Sbjct: 2 YIQGFLVPVLSGKKDAYLAMAKDAGEMFQRYGAIEIVEAFEEDIPEGKHTDFRKAVKAED 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESI 114 E +VFSW+ +P + DAA + M + M+ + MPF G R+IYGGF I Sbjct: 62 GEHIVFSWVIWPDRATCDAAARAMEENEEMEPSED-MPFAGPRLIYGGFTPI 112 >UniRef50_Q89LX7 Blr4416 protein n=3 Tax=Alphaproteobacteria RepID=Q89LX7_BRAJA Length = 120 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 1/112 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+ GFV+ VP DK +AYR A + LF+E+G L IVE W +VP G TDFR AV A++ Sbjct: 2 YIAGFVIPVPEDKMEAYRRWAENGSALFREYGCLEIVESWEDNVPSGTHTDFRRAVNAKD 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESI 114 E++VF+W +P K +AA M D R + G+ +PFD KR+I G F I Sbjct: 62 GEKIVFTWQVWPDKATLEAAEAGMGDDKRFEAAGD-IPFDPKRLILGCFSPI 112 >UniRef50_B9R092 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R092_9RHOB Length = 116 Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 57/115 (49%), Positives = 71/115 (61%), Gaps = 8/115 (6%) Query: 7 FVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEV 66 F+ V KK Y +A K+ LFKE+GA+ E W +DVPDG+VT F MAVK +E V Sbjct: 4 FLAPVKTTKKADYAVIAEKSWALFKEYGAVSSCEAWGTDVPDGEVTSFPMAVKKAPDETV 63 Query: 67 VFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMP-----FDGKRMIYGGFESIID 116 VFSWI +P K DAA KM DPR +GE MP F KRMI+GGFE +++ Sbjct: 64 VFSWIIWPDKTTADAAMGKMEEDPR---WGEIMPNADEVFSLKRMIFGGFEPLLE 115 >UniRef50_A9IUP3 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IUP3_BORPD Length = 119 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 2/115 (1%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDV-PDGKVTDFRMAVKA 60 +YVDGF++A+P DK D Y+ MA+ A ++KE GAL EC ++ D F A A Sbjct: 4 QYVDGFLLAIPKDKLDTYQAMASTAGAVWKEHGALDYRECVGDELHADPNCASFAQAAGA 63 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 E+E VVF+WI YPSK RD N +M+DPR+ E + FD KRM +GGF +++ Sbjct: 64 GEDEVVVFAWILYPSKADRDRTNAAVMADPRLAHCEEGV-FDMKRMAWGGFRTLV 117 >UniRef50_D2S2U1 Putative uncharacterized protein n=10 Tax=cellular organisms RepID=D2S2U1_9EURY Length = 126 Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 6/121 (4%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDV-PD---GKVTDFRMA 57 +YVDGFV+ VP DK D+YREMA +A L+ E GAL E D+ PD + F Sbjct: 3 RYVDGFVLPVPNDKLDSYREMADEAGKLWIEHGALEYFEGVGDDMEPDMDEMSIRTFPQL 62 Query: 58 VKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRM--KEFGESMPFDGKRMIYGGFESII 115 + ++E VVFS+I + S+E RD N K+M D M ++F E MPFD +RM YGGF SI+ Sbjct: 63 AETGDDETVVFSFIVFESREHRDKVNTKVMDDSAMDPEQFTEDMPFDSERMAYGGFRSIV 122 Query: 116 D 116 + Sbjct: 123 N 123 >UniRef50_Q28SF7 Putative uncharacterized protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28SF7_JANSC Length = 118 Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 69/116 (59%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF++ V +KD Y + A K L+ GA R VE W + + G+ T F AV+ Sbjct: 1 MTYVDGFILPVKTARKDDYIKAAQKMTALYLAHGAARCVETWGAGLEPGQNTSFPRAVEL 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VF+W+E+P K DAA++ + SDP ++ DG+RMI GGFE ++D Sbjct: 61 ADDETAVFAWMEFPDKATSDAAHRAVWSDPDTEKLMGDGLVDGQRMIMGGFEILLD 116 >UniRef50_B3PD68 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PD68_CELJU Length = 120 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 YVDGF++ + +K Y++MA KA ++K+ GA+ EC D +T FR A + Sbjct: 3 HYVDGFLLPIAPEKLTEYQKMADKAGAVWKDHGAIAYWECVGDDFNCHDMTSFRQAAGCK 62 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEF-GESMPFDGKRMIYGGFESII 115 +NE VV +WI YPS+E RD N +M+DPR+ + + FD KRM Y GF ++ Sbjct: 63 DNETVVIAWIIYPSREERDRINAAVMADPRLSDMCNDDSIFDYKRMAYAGFRELV 117 >UniRef50_A6UL99 Putative uncharacterized protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UL99_SINMW Length = 134 Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 17/133 (12%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECW----------------AS 44 M Y D ++V VP K DAY+ + + A +++E+GALR+++C + Sbjct: 1 MSYFDCYLVPVPTAKLDAYKLFSQRMAKVYREYGALRVIDCILDPETTDGTQFHAEGAQA 60 Query: 45 DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMK-EFGESMPFDG 103 DV ++ DF A +E E ++ SW E+PSK+ RD ++++DPR++ E GE +G Sbjct: 61 DVQGAELRDFNAAAATKEGETLILSWTEWPSKDARDDLLPRVLADPRVQPEDGEKAICEG 120 Query: 104 KRMIYGGFESIID 116 R++ GGF ++D Sbjct: 121 ARLVAGGFAKLLD 133 >UniRef50_D2R596 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R596_9PLAN Length = 133 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 14/130 (10%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDV-PDGKV-------- 51 M Y D F+ VP D + AY E+A + + E GA+R+VECW + PD Sbjct: 1 MTYFDCFLAPVPRDNRAAYEELARISEQVVLECGAIRVVECWLDEAGPDAATYHGVDTAR 60 Query: 52 -----TDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRM 106 F A A E VV S+IE+P K+ RDA +++ SDPRM+ + FDGKR+ Sbjct: 61 EIVEHGSFMKAAGASGEETVVMSFIEWPDKQARDAGMERVTSDPRMQFTDQPPVFDGKRL 120 Query: 107 IYGGFESIID 116 I GF ++D Sbjct: 121 IAAGFRPMLD 130 >UniRef50_A9WHX6 Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WHX6_CHLAA Length = 128 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVT-------- 52 M Y D ++V VP + K AY E+A +A + +E+GA+R+V+CW + G T Sbjct: 1 MPYFDFYLVPVPIENKTAYEELAYISAQVLREYGAVRVVQCWLDPIGSGASTYHASEVRL 60 Query: 53 ------DFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMK 93 F A E E V S++E+P K +RDA K+ DPRM+ Sbjct: 61 DAGQYPTFLQVAGAREGETAVLSFVEWPDKAIRDAGMTKVTDDPRMQ 107 >UniRef50_A3WDZ7 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDZ7_9SPHN Length = 119 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 YV ++V + KDAY + A A + GAL ++E W + VP+GK TD R AV A E Sbjct: 2 YVAIAALSVSEENKDAYIKAAEFMADWSMKHGALEVMEAWEAFVPEGKNTDLRKAVAAPE 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGES-MPFDGKRMIYGGFESII 115 E++V W+ +P KE + A M + + E PFDG R+I+G FE +I Sbjct: 62 GEKIVTGWVIWPDKETLENAKVAMGKGEGFEGYPEGDPPFDGSRLIFGEFEPLI 115 >UniRef50_C7NJF5 Putative uncharacterized protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJF5_KYTSD Length = 145 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 16/125 (12%) Query: 5 DGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMA------- 57 D +V V ++++AY + A ++++ GA ++ W S P + DF Sbjct: 19 DVTMVPVAVNQREAYLAFEKRMAEVYRDHGATQVTHYWHSG-PPARQEDFHATGASPASA 77 Query: 58 -------VKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPR-MKEFGESMPFDGKRMIYG 109 V A E VV + ++PS+ RD SDPR + E FDG+R+I Sbjct: 78 SPGLAGVVGAGPGEAVVVTVTQWPSRAARDRGTAAATSDPRVLATLDEEPVFDGRRVIGE 137 Query: 110 GFESI 114 FE + Sbjct: 138 TFEVV 142 >UniRef50_Q7SXW8 Acetylserotonin O-methyltransferase-like n=8 Tax=Deuterostomia RepID=Q7SXW8_DANRE Length = 632 Score = 40.4 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%) Query: 4 VDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECW--ASDVPDGKVTDFRMAVK-- 59 VDG ++ P DK+DAYR ++ + F + IV C S V D KV DF K Sbjct: 93 VDGLILEKPTDKQDAYRMLSRLSGKEHSVFTGVAIVICRDKNSSVTDYKVVDFYEETKVK 152 Query: 60 -AEENEEVVFSWI 71 AE +EE+++ +I Sbjct: 153 FAELSEEMLWEYI 165 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q09D57 RNA signal recognition particle 4.5S RNA n=3 Tax... 184 7e-46 UniRef50_P0AAQ8 Uncharacterized protein ybaA n=88 Tax=Proteobact... 181 5e-45 UniRef50_Q3BW04 Putative uncharacterized protein n=4 Tax=Proteob... 181 6e-45 UniRef50_C3MFG6 RNA signal recognition particle 4.5S RNA n=12 Ta... 180 9e-45 UniRef50_D0M1S9 RNA signal recognition particle 4.5S RNA n=6 Tax... 178 3e-44 UniRef50_A4W7D3 Putative uncharacterized protein n=6 Tax=Proteob... 178 5e-44 UniRef50_A6UBM2 Putative uncharacterized protein n=13 Tax=Proteo... 177 1e-43 UniRef50_B6JDI6 RNA signal recognition particle 4.5S RNA n=11 Ta... 177 1e-43 UniRef50_B6ITX3 Putative uncharacterized protein n=3 Tax=Proteob... 174 6e-43 UniRef50_D0CZN0 Response regulator receiver domain protein n=5 T... 165 5e-40 UniRef50_A4A908 Protein containing DUF1428 n=19 Tax=Proteobacter... 162 3e-39 UniRef50_Q0C3F1 Putative uncharacterized protein n=3 Tax=Proteob... 159 3e-38 UniRef50_B3PD68 Putative uncharacterized protein n=1 Tax=Cellvib... 155 4e-37 UniRef50_Q28SF7 Putative uncharacterized protein n=1 Tax=Jannasc... 153 2e-36 UniRef50_Q89LX7 Blr4416 protein n=3 Tax=Alphaproteobacteria RepI... 150 2e-35 UniRef50_Q8Q0W8 RNA signal recognition particle 4.5S RNA n=2 Tax... 149 2e-35 UniRef50_A9IUP3 Putative uncharacterized protein n=1 Tax=Bordete... 147 1e-34 UniRef50_D2R596 Putative uncharacterized protein n=1 Tax=Pirellu... 144 8e-34 UniRef50_Q2NCG7 Putative uncharacterized protein n=1 Tax=Erythro... 141 8e-33 UniRef50_B9R092 Putative uncharacterized protein n=1 Tax=Labrenz... 140 2e-32 UniRef50_A6UL99 Putative uncharacterized protein n=1 Tax=Sinorhi... 138 5e-32 UniRef50_D2S2U1 Putative uncharacterized protein n=10 Tax=cellul... 135 3e-31 UniRef50_A3WDZ7 Putative uncharacterized protein n=1 Tax=Erythro... 131 9e-30 UniRef50_A9WHX6 Putative uncharacterized protein n=2 Tax=Chlorof... 121 7e-27 UniRef50_C7NJF5 Putative uncharacterized protein n=1 Tax=Kytococ... 110 1e-23 Sequences not found previously or not previously below threshold: UniRef50_B5GYT2 Putative uncharacterized protein n=1 Tax=Strepto... 50 3e-05 >UniRef50_Q09D57 RNA signal recognition particle 4.5S RNA n=3 Tax=Proteobacteria RepID=Q09D57_STIAU Length = 116 Score = 184 bits (467), Expect = 7e-46, Method: Composition-based stats. Identities = 81/116 (69%), Positives = 95/116 (81%), Gaps = 1/116 (0%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV+ VP KDAYREMA+KA LFKE+GALR+VECW +DVP+GKVTDF+ AVKA Sbjct: 1 MSYIDGFVIPVPVTNKDAYREMASKALTLFKEYGALRVVECWGNDVPNGKVTDFKGAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 E E VVFSW+E+PSK RDA NQKMM DPRMK E MPFDG+RMI+GGFE ++D Sbjct: 61 EPTETVVFSWVEWPSKAARDAGNQKMMEDPRMKSI-EGMPFDGQRMIFGGFEVLLD 115 >UniRef50_P0AAQ8 Uncharacterized protein ybaA n=88 Tax=Proteobacteria RepID=YBAA_ECO57 Length = 117 Score = 181 bits (460), Expect = 5e-45, Method: Composition-based stats. Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA Sbjct: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE Sbjct: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 >UniRef50_Q3BW04 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=Q3BW04_XANC5 Length = 165 Score = 181 bits (459), Expect = 6e-45, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 74/115 (64%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV+AVP K+A+ A + E+GALR+VECW DV G+ TDF AV A Sbjct: 45 MSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQPGQWTDFYRAVDA 104 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 E VVFSWIE+P K RD +KMM DPRM MPFDGKRM+YGGF I+ Sbjct: 105 TAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIV 159 >UniRef50_C3MFG6 RNA signal recognition particle 4.5S RNA n=12 Tax=Proteobacteria RepID=C3MFG6_RHISN Length = 117 Score = 180 bits (458), Expect = 9e-45, Method: Composition-based stats. Identities = 61/116 (52%), Positives = 83/116 (71%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF+VA+P +AY+++A KA ++KE GAL VEC DVP G++T F AV+A Sbjct: 1 MTYVDGFLVALPKQNIEAYKDLARKAGEVWKEHGALNYVECLGDDVPYGELTSFPRAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 +E+E VVFSW+ Y S++ RDA K+M+DPR++ FDGKRMIYGGFES ++ Sbjct: 61 KEDETVVFSWVVYRSRQDRDAIVAKVMADPRLQGDEWKSIFDGKRMIYGGFESFLE 116 >UniRef50_D0M1S9 RNA signal recognition particle 4.5S RNA n=6 Tax=Proteobacteria RepID=D0M1S9_VIBSE Length = 117 Score = 178 bits (453), Expect = 3e-44, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 88/117 (75%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV AVP K+ Y A AA +F+EFGAL+++E W S+VPDG++T F MAVKA Sbjct: 1 MSYIDGFVAAVPTANKEKYIAHAKIAAEMFREFGALKVIETWGSEVPDGEITSFPMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 E NE VVFSW+ +PSKEVRD+ Q++M DPRM MPFDGKR+IYGGF+ I+++ Sbjct: 61 ESNETVVFSWVVWPSKEVRDSGWQRIMGDPRMSPENNPMPFDGKRLIYGGFDVILEQ 117 >UniRef50_A4W7D3 Putative uncharacterized protein n=6 Tax=Proteobacteria RepID=A4W7D3_ENT38 Length = 117 Score = 178 bits (452), Expect = 5e-44, Method: Composition-based stats. Identities = 100/117 (85%), Positives = 109/117 (93%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 MKYVDGFVVAVPA K+AYREMAAKAAPLFKEFGA R+VECWA DVPDGK+TDFRMAVKA Sbjct: 1 MKYVDGFVVAVPAANKEAYREMAAKAAPLFKEFGATRVVECWAEDVPDGKLTDFRMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 EE EEVVFSWIEYPSKEVRD AN+K+MSDPRMKE+G+SMPFDGKRMIYGGF ++DE Sbjct: 61 EEGEEVVFSWIEYPSKEVRDEANKKLMSDPRMKEWGDSMPFDGKRMIYGGFMPLLDE 117 >UniRef50_A6UBM2 Putative uncharacterized protein n=13 Tax=Proteobacteria RepID=A6UBM2_SINMW Length = 117 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 60/116 (51%), Positives = 83/116 (71%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF+VAVP +AY++MA++A ++KE GAL VEC DVP G++T F AV+A Sbjct: 1 MAYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VVFSWI Y S++ RDA K+M+DPR++ FDGKR+IYGGFE+ ++ Sbjct: 61 TDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLE 116 >UniRef50_B6JDI6 RNA signal recognition particle 4.5S RNA n=11 Tax=Bacteria RepID=B6JDI6_OLICO Length = 119 Score = 177 bits (448), Expect = 1e-43, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 76/117 (64%), Gaps = 2/117 (1%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M+YVDGF+V VP AYR +A KA +++E GAL EC A DV GK T F +VK Sbjct: 1 MQYVDGFIVPVPKKNLTAYRALARKAGKIWREHGALDYRECVAEDVKMGKQTSFPRSVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGES--MPFDGKRMIYGGFESII 115 + NE VV SWI Y S+ RD N K+M DPR+ + +PFDGKRMIYGGFE+++ Sbjct: 61 KPNETVVLSWIVYKSRAHRDRVNAKVMKDPRLTGMIDPKALPFDGKRMIYGGFETLV 117 >UniRef50_B6ITX3 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=B6ITX3_RHOCS Length = 136 Score = 174 bits (442), Expect = 6e-43, Method: Composition-based stats. Identities = 64/115 (55%), Positives = 79/115 (68%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 YVDGFV+AVP K DAY +A AA ++KE GAL EC DVP G +T F AV+A Sbjct: 21 TYVDGFVLAVPRAKLDAYTALARTAAEVWKEHGALAYAECIGDDVPYGTLTSFPRAVQAT 80 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VVFSWI Y S+E RDA N K+M DPR+K + MPFDG+RMI+GGF + I Sbjct: 81 DDEVVVFSWIVYASREERDAINAKVMQDPRLKGSVDDMPFDGRRMIHGGFRTFIQ 135 >UniRef50_D0CZN0 Response regulator receiver domain protein n=5 Tax=Alphaproteobacteria RepID=D0CZN0_9RHOB Length = 115 Score = 165 bits (417), Expect = 5e-40, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 2/116 (1%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YV GF+ VP KDAY A K+ PLFKE+GA + ECW +DVPDG+VT F MAVK Sbjct: 1 MSYVSGFLTPVPGKNKDAYLASAQKSWPLFKEYGATAMRECWEADVPDGEVTSFPMAVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 E+ E VVFSWI +P K DA M +DPR +E MPFDGKRMI+G F+++ + Sbjct: 61 EDGEAVVFSWILWPDKATADACWASMETDPRWREM--DMPFDGKRMIFGNFKTLFE 114 >UniRef50_A4A908 Protein containing DUF1428 n=19 Tax=Proteobacteria RepID=A4A908_9GAMM Length = 121 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 4/120 (3%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DG+++AVP + Y + A + +F E GA R+V+CW DVP+G TD R AV+A Sbjct: 1 MSYIDGYLIAVPTANEQKYIDYAQSSDSIFIEMGATRVVQCWGDDVPEGSTTDMRKAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDP----RMKEFGESMPFDGKRMIYGGFESIID 116 +E +VF+W+E+P K+ R+AA MMSD R+ MPFDG R+IYGGF+ I++ Sbjct: 61 TADESIVFAWVEWPDKDTREAAMATMMSDTFEDDRLNTQKNPMPFDGSRLIYGGFKRIVE 120 >UniRef50_Q0C3F1 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q0C3F1_HYPNA Length = 238 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YV GF++AVP KDAYR+ A +A P+FK +GA+ +VE W DVP GKV AVK Sbjct: 1 MTYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 + +E +FSW+ +P K+ D A QKMM+D KEF E MPFDGKRMI GGFE+I+ Sbjct: 61 KPDETAMFSWVVWPDKKTSDEAEQKMMADMEGKEFPE-MPFDGKRMIVGGFETIV 114 Score = 133 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 55/115 (47%), Positives = 74/115 (64%), Gaps = 1/115 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+DG V+ VPADK+ AY + K A LF+EFGA+ +V+ W ++P+GKV DF A + Sbjct: 123 YIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVDAWGDNLPEGKVNDFHTATLRKP 182 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMP-FDGKRMIYGGFESIID 116 E VVFSWI + K RDA +K+M DPRM+EFG D RMI+G F ++D Sbjct: 183 EEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVD 237 >UniRef50_B3PD68 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PD68_CELJU Length = 120 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 YVDGF++ + +K Y++MA KA ++K+ GA+ EC D +T FR A + Sbjct: 3 HYVDGFLLPIAPEKLTEYQKMADKAGAVWKDHGAIAYWECVGDDFNCHDMTSFRQAAGCK 62 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEF-GESMPFDGKRMIYGGFESII 115 +NE VV +WI YPS+E RD N +M+DPR+ + + FD KRM Y GF ++ Sbjct: 63 DNETVVIAWIIYPSREERDRINAAVMADPRLSDMCNDDSIFDYKRMAYAGFRELV 117 >UniRef50_Q28SF7 Putative uncharacterized protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28SF7_JANSC Length = 118 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 69/116 (59%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF++ V +KD Y + A K L+ GA R VE W + + G+ T F AV+ Sbjct: 1 MTYVDGFILPVKTARKDDYIKAAQKMTALYLAHGAARCVETWGAGLEPGQNTSFPRAVEL 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VF+W+E+P K DAA++ + SDP ++ DG+RMI GGFE ++D Sbjct: 61 ADDETAVFAWMEFPDKATSDAAHRAVWSDPDTEKLMGDGLVDGQRMIMGGFEILLD 116 >UniRef50_Q89LX7 Blr4416 protein n=3 Tax=Alphaproteobacteria RepID=Q89LX7_BRAJA Length = 120 Score = 150 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 1/112 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+ GFV+ VP DK +AYR A + LF+E+G L IVE W +VP G TDFR AV A++ Sbjct: 2 YIAGFVIPVPEDKMEAYRRWAENGSALFREYGCLEIVESWEDNVPSGTHTDFRRAVNAKD 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESI 114 E++VF+W +P K +AA M D R + G+ +PFD KR+I G F I Sbjct: 62 GEKIVFTWQVWPDKATLEAAEAGMGDDKRFEAAGD-IPFDPKRLILGCFSPI 112 >UniRef50_Q8Q0W8 RNA signal recognition particle 4.5S RNA n=2 Tax=cellular organisms RepID=Q8Q0W8_METMA Length = 121 Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats. Identities = 53/117 (45%), Positives = 77/117 (65%), Gaps = 3/117 (2%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 KYVDGF++ + DK + YRE+A K++ ++K+ GAL EC D+ ++ F+ V A Sbjct: 3 KYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVNAS 62 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESM---PFDGKRMIYGGFESII 115 E E V+FSWI Y SKE RD N+ +M+DPRMKE E+ FD +RM YGGF++++ Sbjct: 63 EEETVIFSWIVYESKEQRDKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLV 119 >UniRef50_A9IUP3 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IUP3_BORPD Length = 119 Score = 147 bits (370), Expect = 1e-34, Method: Composition-based stats. Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDV-PDGKVTDFRMAVKA 60 +YVDGF++A+P DK D Y+ MA+ A ++KE GAL EC ++ D F A A Sbjct: 4 QYVDGFLLAIPKDKLDTYQAMASTAGAVWKEHGALDYRECVGDELHADPNCASFAQAAGA 63 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 E+E VVF+WI YPSK RD N +M+DPR+ E FD KRM +GGF +++ Sbjct: 64 GEDEVVVFAWILYPSKADRDRTNAAVMADPRLAHCEEG-VFDMKRMAWGGFRTLV 117 >UniRef50_D2R596 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R596_9PLAN Length = 133 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 14/130 (10%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDV-PDG---------- 49 M Y D F+ VP D + AY E+A + + E GA+R+VECW + PD Sbjct: 1 MTYFDCFLAPVPRDNRAAYEELARISEQVVLECGAIRVVECWLDEAGPDAATYHGVDTAR 60 Query: 50 ---KVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRM 106 + F A A E VV S+IE+P K+ RDA +++ SDPRM+ + FDGKR+ Sbjct: 61 EIVEHGSFMKAAGASGEETVVMSFIEWPDKQARDAGMERVTSDPRMQFTDQPPVFDGKRL 120 Query: 107 IYGGFESIID 116 I GF ++D Sbjct: 121 IAAGFRPMLD 130 >UniRef50_Q2NCG7 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NCG7_ERYLH Length = 118 Score = 141 bits (355), Expect = 8e-33, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+ GF+V V + KKDAY MA A +F+ +GA+ IVE + D+P+GK TDFR AVKAE+ Sbjct: 2 YIQGFLVPVLSGKKDAYLAMAKDAGEMFQRYGAIEIVEAFEEDIPEGKHTDFRKAVKAED 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESI 114 E +VFSW+ +P + DAA + M + E E MPF G R+IYGGF I Sbjct: 62 GEHIVFSWVIWPDRATCDAA-ARAMEENEEMEPSEDMPFAGPRLIYGGFTPI 112 >UniRef50_B9R092 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R092_9RHOB Length = 116 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 54/112 (48%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Query: 7 FVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEV 66 F+ V KK Y +A K+ LFKE+GA+ E W +DVPDG+VT F MAVK +E V Sbjct: 4 FLAPVKTTKKADYAVIAEKSWALFKEYGAVSSCEAWGTDVPDGEVTSFPMAVKKAPDETV 63 Query: 67 VFSWIEYPSKEVRDAANQKMMSDPRMKEFG--ESMPFDGKRMIYGGFESIID 116 VFSWI +P K DAA KM DPR E F KRMI+GGFE +++ Sbjct: 64 VFSWIIWPDKTTADAAMGKMEEDPRWGEIMPNADEVFSLKRMIFGGFEPLLE 115 >UniRef50_A6UL99 Putative uncharacterized protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UL99_SINMW Length = 134 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 17/133 (12%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS---------------- 44 M Y D ++V VP K DAY+ + + A +++E+GALR+++C Sbjct: 1 MSYFDCYLVPVPTAKLDAYKLFSQRMAKVYREYGALRVIDCILDPETTDGTQFHAEGAQA 60 Query: 45 DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMK-EFGESMPFDG 103 DV ++ DF A +E E ++ SW E+PSK+ RD ++++DPR++ E GE +G Sbjct: 61 DVQGAELRDFNAAAATKEGETLILSWTEWPSKDARDDLLPRVLADPRVQPEDGEKAICEG 120 Query: 104 KRMIYGGFESIID 116 R++ GGF ++D Sbjct: 121 ARLVAGGFAKLLD 133 >UniRef50_D2S2U1 Putative uncharacterized protein n=10 Tax=cellular organisms RepID=D2S2U1_9EURY Length = 126 Score = 135 bits (341), Expect = 3e-31, Method: Composition-based stats. Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 6/121 (4%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPD----GKVTDFRMA 57 +YVDGFV+ VP DK D+YREMA +A L+ E GAL E D+ + F Sbjct: 3 RYVDGFVLPVPNDKLDSYREMADEAGKLWIEHGALEYFEGVGDDMEPDMDEMSIRTFPQL 62 Query: 58 VKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRM--KEFGESMPFDGKRMIYGGFESII 115 + ++E VVFS+I + S+E RD N K+M D M ++F E MPFD +RM YGGF SI+ Sbjct: 63 AETGDDETVVFSFIVFESREHRDKVNTKVMDDSAMDPEQFTEDMPFDSERMAYGGFRSIV 122 Query: 116 D 116 + Sbjct: 123 N 123 >UniRef50_A3WDZ7 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDZ7_9SPHN Length = 119 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 YV ++V + KDAY + A A + GAL ++E W + VP+GK TD R AV A E Sbjct: 2 YVAIAALSVSEENKDAYIKAAEFMADWSMKHGALEVMEAWEAFVPEGKNTDLRKAVAAPE 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGE-SMPFDGKRMIYGGFESII 115 E++V W+ +P KE + A M + + E PFDG R+I+G FE +I Sbjct: 62 GEKIVTGWVIWPDKETLENAKVAMGKGEGFEGYPEGDPPFDGSRLIFGEFEPLI 115 >UniRef50_A9WHX6 Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WHX6_CHLAA Length = 128 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 14/113 (12%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVT-------- 52 M Y D ++V VP + K AY E+A +A + +E+GA+R+V+CW + G T Sbjct: 1 MPYFDFYLVPVPIENKTAYEELAYISAQVLREYGAVRVVQCWLDPIGSGASTYHASEVRL 60 Query: 53 ------DFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESM 99 F A E E V S++E+P K +RDA K+ DPRM+ Sbjct: 61 DAGQYPTFLQVAGAREGETAVLSFVEWPDKAIRDAGMTKVTDDPRMQFQNWHP 113 >UniRef50_C7NJF5 Putative uncharacterized protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJF5_KYTSD Length = 145 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 16/125 (12%) Query: 5 DGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMA------- 57 D +V V ++++AY + A ++++ GA ++ W S P + DF Sbjct: 19 DVTMVPVAVNQREAYLAFEKRMAEVYRDHGATQVTHYWHSG-PPARQEDFHATGASPASA 77 Query: 58 -------VKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPR-MKEFGESMPFDGKRMIYG 109 V A E VV + ++PS+ RD SDPR + E FDG+R+I Sbjct: 78 SPGLAGVVGAGPGEAVVVTVTQWPSRAARDRGTAAATSDPRVLATLDEEPVFDGRRVIGE 137 Query: 110 GFESI 114 FE + Sbjct: 138 TFEVV 142 >UniRef50_B5GYT2 Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GYT2_STRCL Length = 142 Score = 49.6 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTD--FRMAVKA 60 Y+ ++ VP +++ +R + +A +F+ GA+ SD P K V Sbjct: 2 YLVVYLHRVPRSREEVFRAVVHRANEVFRRHGAIGATLLEMSD-PRAKYGCSGLLDGVDL 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMP--FDGKRMIYGGFESIID 116 +E + + + + K+ DP ++E ++ D R++ G F ++ + Sbjct: 61 TPDEVLYVELNHFHDRAHFEEVMPKVDIDPELEELYKTFVETLDTSRILRGEFSTVFE 118 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q09D57 RNA signal recognition particle 4.5S RNA n=3 Tax... 180 9e-45 UniRef50_Q3BW04 Putative uncharacterized protein n=4 Tax=Proteob... 178 5e-44 UniRef50_C3MFG6 RNA signal recognition particle 4.5S RNA n=12 Ta... 178 6e-44 UniRef50_P0AAQ8 Uncharacterized protein ybaA n=88 Tax=Proteobact... 178 7e-44 UniRef50_A6UBM2 Putative uncharacterized protein n=13 Tax=Proteo... 176 2e-43 UniRef50_D0M1S9 RNA signal recognition particle 4.5S RNA n=6 Tax... 175 3e-43 UniRef50_B6JDI6 RNA signal recognition particle 4.5S RNA n=11 Ta... 175 3e-43 UniRef50_B6ITX3 Putative uncharacterized protein n=3 Tax=Proteob... 174 9e-43 UniRef50_A4W7D3 Putative uncharacterized protein n=6 Tax=Proteob... 173 1e-42 UniRef50_D0CZN0 Response regulator receiver domain protein n=5 T... 164 1e-39 UniRef50_A4A908 Protein containing DUF1428 n=19 Tax=Proteobacter... 161 7e-39 UniRef50_Q0C3F1 Putative uncharacterized protein n=3 Tax=Proteob... 158 6e-38 UniRef50_B3PD68 Putative uncharacterized protein n=1 Tax=Cellvib... 152 3e-36 UniRef50_Q28SF7 Putative uncharacterized protein n=1 Tax=Jannasc... 151 5e-36 UniRef50_Q89LX7 Blr4416 protein n=3 Tax=Alphaproteobacteria RepI... 147 1e-34 UniRef50_Q8Q0W8 RNA signal recognition particle 4.5S RNA n=2 Tax... 146 2e-34 UniRef50_A9IUP3 Putative uncharacterized protein n=1 Tax=Bordete... 144 6e-34 UniRef50_D2R596 Putative uncharacterized protein n=1 Tax=Pirellu... 143 2e-33 UniRef50_B9R092 Putative uncharacterized protein n=1 Tax=Labrenz... 142 4e-33 UniRef50_Q2NCG7 Putative uncharacterized protein n=1 Tax=Erythro... 140 1e-32 UniRef50_A6UL99 Putative uncharacterized protein n=1 Tax=Sinorhi... 135 5e-31 UniRef50_D2S2U1 Putative uncharacterized protein n=10 Tax=cellul... 133 2e-30 UniRef50_A3WDZ7 Putative uncharacterized protein n=1 Tax=Erythro... 128 7e-29 UniRef50_A9WHX6 Putative uncharacterized protein n=2 Tax=Chlorof... 122 4e-27 UniRef50_C7NJF5 Putative uncharacterized protein n=1 Tax=Kytococ... 109 3e-23 UniRef50_B5GYT2 Putative uncharacterized protein n=1 Tax=Strepto... 103 2e-21 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_Q09D57 RNA signal recognition particle 4.5S RNA n=3 Tax=Proteobacteria RepID=Q09D57_STIAU Length = 116 Score = 180 bits (458), Expect = 9e-45, Method: Composition-based stats. Identities = 81/116 (69%), Positives = 95/116 (81%), Gaps = 1/116 (0%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV+ VP KDAYREMA+KA LFKE+GALR+VECW +DVP+GKVTDF+ AVKA Sbjct: 1 MSYIDGFVIPVPVTNKDAYREMASKALTLFKEYGALRVVECWGNDVPNGKVTDFKGAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 E E VVFSW+E+PSK RDA NQKMM DPRMK E MPFDG+RMI+GGFE ++D Sbjct: 61 EPTETVVFSWVEWPSKAARDAGNQKMMEDPRMKSI-EGMPFDGQRMIFGGFEVLLD 115 >UniRef50_Q3BW04 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=Q3BW04_XANC5 Length = 165 Score = 178 bits (452), Expect = 5e-44, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 74/115 (64%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV+AVP K+A+ A + E+GALR+VECW DV G+ TDF AV A Sbjct: 45 MSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQPGQWTDFYRAVDA 104 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 E VVFSWIE+P K RD +KMM DPRM MPFDGKRM+YGGF I+ Sbjct: 105 TAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIV 159 >UniRef50_C3MFG6 RNA signal recognition particle 4.5S RNA n=12 Tax=Proteobacteria RepID=C3MFG6_RHISN Length = 117 Score = 178 bits (451), Expect = 6e-44, Method: Composition-based stats. Identities = 61/116 (52%), Positives = 83/116 (71%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF+VA+P +AY+++A KA ++KE GAL VEC DVP G++T F AV+A Sbjct: 1 MTYVDGFLVALPKQNIEAYKDLARKAGEVWKEHGALNYVECLGDDVPYGELTSFPRAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 +E+E VVFSW+ Y S++ RDA K+M+DPR++ FDGKRMIYGGFES ++ Sbjct: 61 KEDETVVFSWVVYRSRQDRDAIVAKVMADPRLQGDEWKSIFDGKRMIYGGFESFLE 116 >UniRef50_P0AAQ8 Uncharacterized protein ybaA n=88 Tax=Proteobacteria RepID=YBAA_ECO57 Length = 117 Score = 178 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA Sbjct: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE Sbjct: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 >UniRef50_A6UBM2 Putative uncharacterized protein n=13 Tax=Proteobacteria RepID=A6UBM2_SINMW Length = 117 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 60/116 (51%), Positives = 83/116 (71%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF+VAVP +AY++MA++A ++KE GAL VEC DVP G++T F AV+A Sbjct: 1 MAYVDGFIVAVPTANLEAYKKMASEAGAVWKEHGALNYVECIGDDVPRGELTSFPRAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VVFSWI Y S++ RDA K+M+DPR++ FDGKR+IYGGFE+ ++ Sbjct: 61 TDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDAWKDVFDGKRLIYGGFEAFLE 116 >UniRef50_D0M1S9 RNA signal recognition particle 4.5S RNA n=6 Tax=Proteobacteria RepID=D0M1S9_VIBSE Length = 117 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 88/117 (75%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DGFV AVP K+ Y A AA +F+EFGAL+++E W S+VPDG++T F MAVKA Sbjct: 1 MSYIDGFVAAVPTANKEKYIAHAKIAAEMFREFGALKVIETWGSEVPDGEITSFPMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 E NE VVFSW+ +PSKEVRD+ Q++M DPRM MPFDGKR+IYGGF+ I+++ Sbjct: 61 ESNETVVFSWVVWPSKEVRDSGWQRIMGDPRMSPENNPMPFDGKRLIYGGFDVILEQ 117 >UniRef50_B6JDI6 RNA signal recognition particle 4.5S RNA n=11 Tax=Bacteria RepID=B6JDI6_OLICO Length = 119 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 76/117 (64%), Gaps = 2/117 (1%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M+YVDGF+V VP AYR +A KA +++E GAL EC A DV GK T F +VK Sbjct: 1 MQYVDGFIVPVPKKNLTAYRALARKAGKIWREHGALDYRECVAEDVKMGKQTSFPRSVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGES--MPFDGKRMIYGGFESII 115 + NE VV SWI Y S+ RD N K+M DPR+ + +PFDGKRMIYGGFE+++ Sbjct: 61 KPNETVVLSWIVYKSRAHRDRVNAKVMKDPRLTGMIDPKALPFDGKRMIYGGFETLV 117 >UniRef50_B6ITX3 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=B6ITX3_RHOCS Length = 136 Score = 174 bits (441), Expect = 9e-43, Method: Composition-based stats. Identities = 64/115 (55%), Positives = 79/115 (68%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 YVDGFV+AVP K DAY +A AA ++KE GAL EC DVP G +T F AV+A Sbjct: 21 TYVDGFVLAVPRAKLDAYTALARTAAEVWKEHGALAYAECIGDDVPYGTLTSFPRAVQAT 80 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VVFSWI Y S+E RDA N K+M DPR+K + MPFDG+RMI+GGF + I Sbjct: 81 DDEVVVFSWIVYASREERDAINAKVMQDPRLKGSVDDMPFDGRRMIHGGFRTFIQ 135 >UniRef50_A4W7D3 Putative uncharacterized protein n=6 Tax=Proteobacteria RepID=A4W7D3_ENT38 Length = 117 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 100/117 (85%), Positives = 109/117 (93%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 MKYVDGFVVAVPA K+AYREMAAKAAPLFKEFGA R+VECWA DVPDGK+TDFRMAVKA Sbjct: 1 MKYVDGFVVAVPAANKEAYREMAAKAAPLFKEFGATRVVECWAEDVPDGKLTDFRMAVKA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE 117 EE EEVVFSWIEYPSKEVRD AN+K+MSDPRMKE+G+SMPFDGKRMIYGGF ++DE Sbjct: 61 EEGEEVVFSWIEYPSKEVRDEANKKLMSDPRMKEWGDSMPFDGKRMIYGGFMPLLDE 117 >UniRef50_D0CZN0 Response regulator receiver domain protein n=5 Tax=Alphaproteobacteria RepID=D0CZN0_9RHOB Length = 115 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 2/116 (1%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YV GF+ VP KDAY A K+ PLFKE+GA + ECW +DVPDG+VT F MAVK Sbjct: 1 MSYVSGFLTPVPGKNKDAYLASAQKSWPLFKEYGATAMRECWEADVPDGEVTSFPMAVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 E+ E VVFSWI +P K DA M +DPR +E MPFDGKRMI+G F+++ + Sbjct: 61 EDGEAVVFSWILWPDKATADACWASMETDPRWREM--DMPFDGKRMIFGNFKTLFE 114 >UniRef50_A4A908 Protein containing DUF1428 n=19 Tax=Proteobacteria RepID=A4A908_9GAMM Length = 121 Score = 161 bits (407), Expect = 7e-39, Method: Composition-based stats. Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 4/120 (3%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M Y+DG+++AVP + Y + A + +F E GA R+V+CW DVP+G TD R AV+A Sbjct: 1 MSYIDGYLIAVPTANEQKYIDYAQSSDSIFIEMGATRVVQCWGDDVPEGSTTDMRKAVQA 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDP----RMKEFGESMPFDGKRMIYGGFESIID 116 +E +VF+W+E+P K+ R+AA MMSD R+ MPFDG R+IYGGF+ I++ Sbjct: 61 TADESIVFAWVEWPDKDTREAAMATMMSDTFEDDRLNTQKNPMPFDGSRLIYGGFKRIVE 120 >UniRef50_Q0C3F1 Putative uncharacterized protein n=3 Tax=Proteobacteria RepID=Q0C3F1_HYPNA Length = 238 Score = 158 bits (399), Expect = 6e-38, Method: Composition-based stats. Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YV GF++AVP KDAYR+ A +A P+FK +GA+ +VE W DVP GKV AVK Sbjct: 1 MTYVSGFLLAVPTANKDAYRKQAEEAWPMFKGYGAVAMVEGWGDDVPQGKVNCINSAVKR 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 + +E +FSW+ +P K+ D A QKMM+D KEF E MPFDGKRMI GGFE+I+ Sbjct: 61 KPDETAMFSWVVWPDKKTSDEAEQKMMADMEGKEFPE-MPFDGKRMIVGGFETIV 114 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 55/115 (47%), Positives = 74/115 (64%), Gaps = 1/115 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+DG V+ VPADK+ AY + K A LF+EFGA+ +V+ W ++P+GKV DF A + Sbjct: 123 YIDGTVIPVPADKRGAYTAASHKMAELFQEFGAISVVDAWGDNLPEGKVNDFHTATLRKP 182 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMP-FDGKRMIYGGFESIID 116 E VVFSWI + K RDA +K+M DPRM+EFG D RMI+G F ++D Sbjct: 183 EEAVVFSWINWKDKATRDAGWEKIMEDPRMQEFGPHTVGADMGRMIFGSFVPLVD 237 >UniRef50_B3PD68 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PD68_CELJU Length = 120 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 YVDGF++ + +K Y++MA KA ++K+ GA+ EC D +T FR A + Sbjct: 3 HYVDGFLLPIAPEKLTEYQKMADKAGAVWKDHGAIAYWECVGDDFNCHDMTSFRQAAGCK 62 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEF-GESMPFDGKRMIYGGFESII 115 +NE VV +WI YPS+E RD N +M+DPR+ + + FD KRM Y GF ++ Sbjct: 63 DNETVVIAWIIYPSREERDRINAAVMADPRLSDMCNDDSIFDYKRMAYAGFRELV 117 >UniRef50_Q28SF7 Putative uncharacterized protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28SF7_JANSC Length = 118 Score = 151 bits (382), Expect = 5e-36, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 69/116 (59%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60 M YVDGF++ V +KD Y + A K L+ GA R VE W + + G+ T F AV+ Sbjct: 1 MTYVDGFILPVKTARKDDYIKAAQKMTALYLAHGAARCVETWGAGLEPGQNTSFPRAVEL 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIID 116 ++E VF+W+E+P K DAA++ + SDP ++ DG+RMI GGFE ++D Sbjct: 61 ADDETAVFAWMEFPDKATSDAAHRAVWSDPDTEKLMGDGLVDGQRMIMGGFEILLD 116 >UniRef50_Q89LX7 Blr4416 protein n=3 Tax=Alphaproteobacteria RepID=Q89LX7_BRAJA Length = 120 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 1/112 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+ GFV+ VP DK +AYR A + LF+E+G L IVE W +VP G TDFR AV A++ Sbjct: 2 YIAGFVIPVPEDKMEAYRRWAENGSALFREYGCLEIVESWEDNVPSGTHTDFRRAVNAKD 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESI 114 E++VF+W +P K +AA M D R + G +PFD KR+I G F I Sbjct: 62 GEKIVFTWQVWPDKATLEAAEAGMGDDKRFEAAG-DIPFDPKRLILGCFSPI 112 >UniRef50_Q8Q0W8 RNA signal recognition particle 4.5S RNA n=2 Tax=cellular organisms RepID=Q8Q0W8_METMA Length = 121 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 53/117 (45%), Positives = 77/117 (65%), Gaps = 3/117 (2%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAE 61 KYVDGF++ + DK + YRE+A K++ ++K+ GAL EC D+ ++ F+ V A Sbjct: 3 KYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVNAS 62 Query: 62 ENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESM---PFDGKRMIYGGFESII 115 E E V+FSWI Y SKE RD N+ +M+DPRMKE E+ FD +RM YGGF++++ Sbjct: 63 EEETVIFSWIVYESKEQRDKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLV 119 >UniRef50_A9IUP3 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IUP3_BORPD Length = 119 Score = 144 bits (364), Expect = 6e-34, Method: Composition-based stats. Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDV-PDGKVTDFRMAVKA 60 +YVDGF++A+P DK D Y+ MA+ A ++KE GAL EC ++ D F A A Sbjct: 4 QYVDGFLLAIPKDKLDTYQAMASTAGAVWKEHGALDYRECVGDELHADPNCASFAQAAGA 63 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESII 115 E+E VVF+WI YPSK RD N +M+DPR+ E FD KRM +GGF +++ Sbjct: 64 GEDEVVVFAWILYPSKADRDRTNAAVMADPRLAHCEEG-VFDMKRMAWGGFRTLV 117 >UniRef50_D2R596 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R596_9PLAN Length = 133 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 14/130 (10%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDG----------- 49 M Y D F+ VP D + AY E+A + + E GA+R+VECW + Sbjct: 1 MTYFDCFLAPVPRDNRAAYEELARISEQVVLECGAIRVVECWLDEAGPDAATYHGVDTAR 60 Query: 50 ---KVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRM 106 + F A A E VV S+IE+P K+ RDA +++ SDPRM+ + FDGKR+ Sbjct: 61 EIVEHGSFMKAAGASGEETVVMSFIEWPDKQARDAGMERVTSDPRMQFTDQPPVFDGKRL 120 Query: 107 IYGGFESIID 116 I GF ++D Sbjct: 121 IAAGFRPMLD 130 >UniRef50_B9R092 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R092_9RHOB Length = 116 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 54/112 (48%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Query: 7 FVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEV 66 F+ V KK Y +A K+ LFKE+GA+ E W +DVPDG+VT F MAVK +E V Sbjct: 4 FLAPVKTTKKADYAVIAEKSWALFKEYGAVSSCEAWGTDVPDGEVTSFPMAVKKAPDETV 63 Query: 67 VFSWIEYPSKEVRDAANQKMMSDPRMKEFG--ESMPFDGKRMIYGGFESIID 116 VFSWI +P K DAA KM DPR E F KRMI+GGFE +++ Sbjct: 64 VFSWIIWPDKTTADAAMGKMEEDPRWGEIMPNADEVFSLKRMIFGGFEPLLE 115 >UniRef50_Q2NCG7 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NCG7_ERYLH Length = 118 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 Y+ GF+V V + KKDAY MA A +F+ +GA+ IVE + D+P+GK TDFR AVKAE+ Sbjct: 2 YIQGFLVPVLSGKKDAYLAMAKDAGEMFQRYGAIEIVEAFEEDIPEGKHTDFRKAVKAED 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESI 114 E +VFSW+ +P + DAA + M + E E MPF G R+IYGGF I Sbjct: 62 GEHIVFSWVIWPDRATCDAA-ARAMEENEEMEPSEDMPFAGPRLIYGGFTPI 112 >UniRef50_A6UL99 Putative uncharacterized protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UL99_SINMW Length = 134 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 17/133 (12%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS---------------- 44 M Y D ++V VP K DAY+ + + A +++E+GALR+++C Sbjct: 1 MSYFDCYLVPVPTAKLDAYKLFSQRMAKVYREYGALRVIDCILDPETTDGTQFHAEGAQA 60 Query: 45 DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMK-EFGESMPFDG 103 DV ++ DF A +E E ++ SW E+PSK+ RD ++++DPR++ E GE +G Sbjct: 61 DVQGAELRDFNAAAATKEGETLILSWTEWPSKDARDDLLPRVLADPRVQPEDGEKAICEG 120 Query: 104 KRMIYGGFESIID 116 R++ GGF ++D Sbjct: 121 ARLVAGGFAKLLD 133 >UniRef50_D2S2U1 Putative uncharacterized protein n=10 Tax=cellular organisms RepID=D2S2U1_9EURY Length = 126 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 6/121 (4%) Query: 2 KYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPD----GKVTDFRMA 57 +YVDGFV+ VP DK D+YREMA +A L+ E GAL E D+ + F Sbjct: 3 RYVDGFVLPVPNDKLDSYREMADEAGKLWIEHGALEYFEGVGDDMEPDMDEMSIRTFPQL 62 Query: 58 VKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRM--KEFGESMPFDGKRMIYGGFESII 115 + ++E VVFS+I + S+E RD N K+M D M ++F E MPFD +RM YGGF SI+ Sbjct: 63 AETGDDETVVFSFIVFESREHRDKVNTKVMDDSAMDPEQFTEDMPFDSERMAYGGFRSIV 122 Query: 116 D 116 + Sbjct: 123 N 123 >UniRef50_A3WDZ7 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDZ7_9SPHN Length = 119 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEE 62 YV ++V + KDAY + A A + GAL ++E W + VP+GK TD R AV A E Sbjct: 2 YVAIAALSVSEENKDAYIKAAEFMADWSMKHGALEVMEAWEAFVPEGKNTDLRKAVAAPE 61 Query: 63 NEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGE-SMPFDGKRMIYGGFESII 115 E++V W+ +P KE + A M + + E PFDG R+I+G FE +I Sbjct: 62 GEKIVTGWVIWPDKETLENAKVAMGKGEGFEGYPEGDPPFDGSRLIFGEFEPLI 115 >UniRef50_A9WHX6 Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WHX6_CHLAA Length = 128 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 14/113 (12%) Query: 1 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVT-------- 52 M Y D ++V VP + K AY E+A +A + +E+GA+R+V+CW + G T Sbjct: 1 MPYFDFYLVPVPIENKTAYEELAYISAQVLREYGAVRVVQCWLDPIGSGASTYHASEVRL 60 Query: 53 ------DFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESM 99 F A E E V S++E+P K +RDA K+ DPRM+ Sbjct: 61 DAGQYPTFLQVAGAREGETAVLSFVEWPDKAIRDAGMTKVTDDPRMQFQNWHP 113 >UniRef50_C7NJF5 Putative uncharacterized protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJF5_KYTSD Length = 145 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 16/125 (12%) Query: 5 DGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRM-------- 56 D +V V ++++AY + A ++++ GA ++ W S P + DF Sbjct: 19 DVTMVPVAVNQREAYLAFEKRMAEVYRDHGATQVTHYWHSG-PPARQEDFHATGASPASA 77 Query: 57 ------AVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPR-MKEFGESMPFDGKRMIYG 109 V A E VV + ++PS+ RD SDPR + E FDG+R+I Sbjct: 78 SPGLAGVVGAGPGEAVVVTVTQWPSRAARDRGTAAATSDPRVLATLDEEPVFDGRRVIGE 137 Query: 110 GFESI 114 FE + Sbjct: 138 TFEVV 142 >UniRef50_B5GYT2 Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GYT2_STRCL Length = 142 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 3 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTD--FRMAVKA 60 Y+ ++ VP +++ +R + +A +F+ GA+ SD P K V Sbjct: 2 YLVVYLHRVPRSREEVFRAVVHRANEVFRRHGAIGATLLEMSD-PRAKYGCSGLLDGVDL 60 Query: 61 EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMP--FDGKRMIYGGFESIID 116 +E + + + + K+ DP ++E ++ D R++ G F ++ + Sbjct: 61 TPDEVLYVELNHFHDRAHFEEVMPKVDIDPELEELYKTFVETLDTSRILRGEFSTVFE 118 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.150 0.470 Lambda K H 0.267 0.0466 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 789,371,120 Number of Sequences: 3077464 Number of extensions: 29530959 Number of successful extensions: 70308 Number of sequences better than 1.0e-01: 26 Number of HSP's better than 0.1 without gapping: 75 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 70162 Number of HSP's gapped (non-prelim): 81 length of query: 117 length of database: 1,040,396,356 effective HSP length: 84 effective length of query: 33 effective length of database: 781,889,380 effective search space: 25802349540 effective search space used: 25802349540 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 87 (37.9 bits)