269 c1vmaA_ Probab=96.42   E-value=0.015  Score=35.39  Aligned_columns=158  Identities=13%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCEECCCCCCCCCCCCCCCCEEECCCCHHHCCCCEEHH
Q ss_conf             34025789988999869999889999999973486688364073421222332223322221000121022103401156
Q batch____        42 GVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTIG  121 (334)
Q Consensus        42 ~vsl~i~~Gei~~ivG~sGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~  121 (334)
                      .+++.-.+..+++++|++|+||||.+--|+..+.-...++.+-..|....                    .+.....+..
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~--------------------gA~eQL~~~a  143 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA--------------------AAIEQLKIWG  143 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH--------------------HHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH--------------------HHHHHHHHHH
T ss_conf             00235789669999806887602489999999996799489997587686--------------------4799999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCHHHHHHHH-----HHCCCHHHCCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf             63211121026664210022102456553-----2001000013822335101222344455310110001102334788
Q batch____       122 EIIAEPLRTYHPKMSRQEVRERVKAMMLK-----VGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALD  196 (334)
Q Consensus       122 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~p~~LSgG~~qRv~iA~al~~~p~ililDEPts~LD  196 (334)
                      +.+...+......................     +.++..-...+-..+..-+++-+.....+..+++    ||..--+|
T Consensus       144 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p----~~~~LVl~  219 (294)
T c1vmaA_         144 ERVGATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAP----HETLLVID  219 (294)
T ss_dssp             HHHTCEEECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCC----SEEEEEEE
T ss_pred             HHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC----CEEEEEEE
T ss_conf             76198289748836989999999999997799899981888987857999999999999630356688----53999811


Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             778999999999998866987999918
Q batch____       197 VSIQAQVVNLLQQLQREMGLSLIFIAH  223 (334)
Q Consensus       197 ~~~~~~i~~ll~~l~~~~g~tii~itH  223 (334)
                      +.+..+.++.+....+..+.+-+++|+
T Consensus       220 a~~~~~~~~~~~~~~~~~~~~~iIlTK  246 (294)
T c1vmaA_         220 ATTGQNGLVQAKIFKEAVNVTGIILTK  246 (294)
T ss_dssp             GGGHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             468789999999996308997699974