87 c1s3sA_ Probab=98.95   E-value=6.5e-09  Score=74.73  Aligned_columns=198  Identities=19%

Q ss_pred             CCCCHHHCCCCHHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf             479976812315899999999962-----------355551699825888878999999985077779877998377899
Q batch____       320 VSHTFAHMPQDDPQTRRLIHFGRQ-----------AARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYG  388 (639)
Q Consensus       320 ~~~~~~~~~g~s~~~~~~~~~~~~-----------~a~~~~pvli~Ge~GtGK~~~A~aiH~~s~~~~~pfi~i~c~~~~  388 (639)
                      ...+|.++.|-+...+++.+.+..           -......|||.|++||||+++++++....   ..+|+.++|    
T Consensus       177 ~~~~~~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~---~~~~~~i~~----  249 (436)
T c1s3sA_         177 NEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET---GAFFFLING----  249 (436)
T ss_dssp             TSCCGGGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHHH---TCEEEEEEH----
T ss_pred             CCCCHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEEH----
T ss_conf             6789534205499999999999975018898974889987538986799899789999998744---995899730----


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCEEEEC---CCCEEEEECHHHC-----------CHHHHHHHHHHHHCCCEEECCCCCEE
Q ss_conf             778888763841234555754314550---6987998434679-----------89999999999843967676898460
Q batch____       389 DAALAEEFIGGDRTDNENGRLSRLELA---HGGTLFLEKIEYL-----------AVELQSALLQVIKQGVITRLDARRLI  454 (639)
Q Consensus       389 ~~~~~~~l~g~~~~~~~~~~~g~~~~a---~~gtl~ldei~~l-----------~~~~q~~L~~~l~~~~~~~~~~~~~~  454 (639)
                           +++++...+.....-...|+.|   ...++||||+|.+           ....-..++..++.         ...
T Consensus       250 -----~~l~~~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  315 (436)
T c1s3sA_         250 -----PEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------LKQ  315 (436)
T ss_dssp             -----HHHHTSCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHH---------CCG
T ss_pred             -----HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC---------CCC
T ss_conf             -----687001001588889999999975099489840000321025788745889999999864302---------224


Q ss_pred             CCCEEEEEECCCCHHHHHHCCCCCHHHHHHHCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH-HHHHHC
Q ss_conf             1550377506898689988789997899872632112898435731089999999999999827799739899-999854
Q batch____       455 PIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDA-LARLVS  533 (639)
Q Consensus       455 ~~~~rii~~~~~~l~~~~~~~~~~~~l~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~s~~a-~~~L~~  533 (639)
                      ...+-+|++|+.  .+.+.....+...|.+  .+.+.+|.-.+|.+            .-+.+-+...++++. +..|..
T Consensus       316 ~~~v~vi~tt~~--~~~l~~~l~r~~rf~~--~i~~~~P~~~~R~~------------Il~~~~~~~~l~~d~~~~~la~  379 (436)
T c1s3sA_         316 RAHVIVMAATNR--PNSIDPALRRFGRFDR--EVDIGIPDATGRLE------------ILQIHTKNMKLADDVDLEQVAN  379 (436)
T ss_dssp             GGCEEEEEEESC--GGGSCGGGTSTTSSCE--EEECCCCCHHHHHH------------HHHHTTTTSEECTTCCHHHHHT
T ss_pred             CCCEEEEEECCC--HHHCCHHHHCCCCCEE--EEECCCCCHHHHHH------------HHHHHHCCCCCCCCCCHHHHHH
T ss_conf             698799984489--5888824204240303--66678989999999------------9999843898988668788998


Q ss_pred             CCCCCCHHHHHHHHHHHHHHC
Q ss_conf             887880799999999999857
Q batch____       534 CAWPGNDFELYSVIENLALSS  554 (639)
Q Consensus       534 y~WPGNireL~~~i~~~~~~~  554 (639)
                      ..=-=...+|.++++.+...+
T Consensus       380 ~t~g~~~~dl~~l~~~a~~~a  400 (436)
T c1s3sA_         380 ETHGHVGADLAALCSEAALQA  400 (436)
T ss_dssp             TCCSCCHHHHHHHHHHHHHHH
T ss_pred             HCCCCCHHHHHHHHHHHHHHH
T ss_conf             768998899999999999999