12 c1in8A_ Probab=99.84   E-value=5.5e-18  Score=131.79  Aligned_columns=257  Identities=17%

Q ss_pred             CCCCHHHCCCCHHHHHHHHHHHHHC---CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
Q ss_conf             4799768123158999999999623---5555169982588887899999998507777987799837789977888876
Q batch____       320 VSHTFAHMPQDDPQTRRLIHFGRQA---ARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEF  396 (639)
Q Consensus       320 ~~~~~~~~~g~s~~~~~~~~~~~~~---a~~~~pvli~Ge~GtGK~~~A~aiH~~s~~~~~pfi~i~c~~~~~~~~~~~l  396 (639)
                      .+.+|++++|++...+++...+...   .....+|||+|++||||+++|++|++..   +.+|+.++|............
T Consensus         4 rp~~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l---~~~~~~i~~~~~~~~~~~~~~   80 (298)
T c1in8A_           4 RPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQGDMAAI   80 (298)
T ss_dssp             SCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCSHHHHHHH
T ss_pred             CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCCCHHHHHH
T ss_conf             89997781270999999999999986338888857998698898889999999970---997999941553320124566


Q ss_pred             CCCCCCCCCCCCCCEEEECCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEECCCEEEEEECCCCHHHHHHCCC
Q ss_conf             38412345557543145506987998434679899999999998439676768984601550377506898689988789
Q batch____       397 IGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNR  476 (639)
Q Consensus       397 ~g~~~~~~~~~~~g~~~~a~~gtl~ldei~~l~~~~q~~L~~~l~~~~~~~~~~~~~~~~~~rii~~~~~~l~~~~~~~~  476 (639)
                      +              .....++++|+||++.++...|..|+..+++       ........+.++.....+.........
T Consensus        81 ~--------------~~~~~~~il~~dei~~l~~~~~~~l~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (298)
T c1in8A_          81 L--------------TSLERGDVLFIDEIHRLNKAVEELLYSAIED-------FQIDIQPFTLVGATVRSGLLSSPLRSR  139 (298)
T ss_dssp             H--------------HTCCTTCEEEEETGGGCCHHHHHHHHHHHHH-------SCCCCCCCEEEEEESCGGGSCHHHHTT
T ss_pred             H--------------HHHCCCCEEEEEEHHHCCHHHHHHHHHHHHC-------CCCCCCEEEECCCCCCHHHCCCHHHHH
T ss_conf             8--------------8513799899942367698999999999705-------533444066526545856314643323


Q ss_pred             CCHHHHHHHCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC-
Q ss_conf             9978998726321128984357310899999999999998277997398999998548878807999999999998578-
Q batch____       477 FSRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSD-  555 (639)
Q Consensus       477 ~~~~l~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~s~~a~~~L~~y~WPGNireL~~~i~~~~~~~~-  555 (639)
                      |...         +..++...  +++..++..++.+      ..+.++.++++.+..+ |+||+|++.++++.++..+. 
T Consensus       140 ~~~~---------~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~i~~~-~~g~~R~~~~ll~~~~~~~~~  201 (298)
T c1in8A_         140 FGII---------LELDFYTV--KELKEIIKRAASL------MDVEIEDAAAEMIAKR-SRGTPRIAIRLTKRVRDMLTV  201 (298)
T ss_dssp             CSEE---------EECCCCCH--HHHHHHHHHHHHH------TTCCBCHHHHHHHHHT-STTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHH---------CCCCCCCH--HHHHHHHHHHHHH------CCCCCCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHH
T ss_conf             4431---------13678989--9999999999998------2985588999999998-399989999999999999985


Q ss_pred             --CCEECHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             --981248882656320145545675556820218999999999999982985---7899988489988999999981
Q batch____       556 --NGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGR---IQEMSALLGIGRTTLWRKMKQH  628 (639)
Q Consensus       556 --~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~l~~~E~~~I~~al~~~~gn---~~~aA~~LGisR~TLyrkl~~~  628 (639)
                        .+.|+.+++...+.........          ..+.+++.+...+...+++   ....|+.||++..|+..+++.|
T Consensus       202 ~~~~~i~~~~i~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~~  269 (298)
T c1in8A_         202 VKADRINTDIVLKTMEVLNIDDEG----------LDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPY  269 (298)
T ss_dssp             HTCSSBCHHHHHHHHHHHTCCTTC----------CCHHHHHHHHHHHHHSTTCCBCHHHHHHHHTSCHHHHHHTTHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCHH----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             298876989999999751255101----------11468999999999817695479999998599989999997657