230 c1vmaA_ Probab=96.74   E-value=0.0012  Score=41.29  Aligned_columns=132  Identities=24%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECHHCCCCCCEEEEEEECCCCCCCHHHEECCCCCC
Q ss_conf             33246889978999879998898999999568747611699988981118920224778863134442011001013455
Q batch____        22 DFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGL  101 (360)
Q Consensus        22 ~vs~~i~~Ge~~~i~G~~GsGKsTll~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~v~~~~~l~~~~~v~~ni~~~~  101 (360)
                      .+.+.-.+..+++++||+|+||||.+--|+..+.-..-.|.+-.-|....                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             CCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHCCCCEEEEEE----------------------
Q ss_conf             4321105642011122101246300000023434544405604257621676599996----------------------
Q batch____       102 KMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMD----------------------  159 (360)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LSgG~~qrv~iaral~~~p~illlD----------------------  159 (360)
                              ...+....+.+..++..+....+.+++.-.++-+..|+  ..+.+++|.|                      
T Consensus       134 --------gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~  203 (294)
T c1vmaA_         134 --------AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELRKVHRVV  203 (294)
T ss_dssp             --------HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHHHHHHHG
T ss_pred             --------HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             --------47999999997619828974883698999999999999--77998999818889878579999999999996


Q ss_pred             ---------CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             ---------6100888899999999999999973983578722
Q batch____       160 ---------EPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTH  193 (360)
Q Consensus       160 ---------EP~s~lD~~~~~~i~~~l~~l~~~~g~tvi~vtH  193 (360)
                               |..--+|..+.......+....+..+.+-++.|+
T Consensus       204 ~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~iIlTK  246 (294)
T c1vmaA_         204 KKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTK  246 (294)
T ss_dssp             GGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             HHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             3035668853999811468789999999996308997699974