BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (98 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=... 206 2e-52 UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli ... 174 6e-43 UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH... 105 5e-22 UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella... 80 2e-14 UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator ... 67 1e-10 UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_A... 66 3e-10 UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovo... 65 6e-10 UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovo... 62 4e-09 UniRef50_A4JD18 Putative uncharacterized protein n=1 Tax=Burkhol... 61 1e-08 UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax... 61 1e-08 UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemoph... 58 1e-07 UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax... 55 8e-07 UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingell... 55 9e-07 UniRef50_B4YK26 Putative uncharacterized protein n=1 Tax=Tetrath... 54 1e-06 UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudom... 53 3e-06 UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella Re... 53 3e-06 UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro f... 52 4e-06 UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudom... 52 5e-06 UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q... 52 7e-06 UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro f... 52 8e-06 UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella... 51 1e-05 UniRef50_C5A7V7 Putative uncharacterized protein n=1 Tax=Burkhol... 49 3e-05 UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=... 49 4e-05 UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobac... 49 6e-05 UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkhol... 45 0.001 UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisser... 45 0.001 UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteob... 44 0.001 UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Provide... 44 0.002 UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella... 44 0.002 UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepI... 44 0.002 UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteob... 42 0.005 UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovo... 42 0.008 UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemoph... 40 0.030 UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptosp... 39 0.045 UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Ars... 39 0.047 UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoa... 39 0.047 UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS ... 39 0.049 UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp... 39 0.052 UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylo... 38 0.093 >UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=YDAS_ECOLI Length = 98 Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 98/98 (100%), Positives = 98/98 (100%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC Sbjct: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 Query: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT Sbjct: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 >UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli RepID=C8U5T9_ECO10 Length = 114 Score = 174 bits (442), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 83/98 (84%), Positives = 90/98 (91%), Gaps = 4/98 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKK+NYSFK+ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERAT+G VLC Sbjct: 8 MKKDNYSFKRACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATKGGVLC 67 Query: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 EELRPD+DW+YLRRS+C SQNMS+KQ ND N DHT Sbjct: 68 EELRPDVDWTYLRRSSCYSQNMSMKQPNDEN----DHT 101 >UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH8_PROMH Length = 79 Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 45/67 (67%), Positives = 54/67 (80%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + K+AC VGGQS MA+ LG+SPP+VNQWI G R++PA RCP IE+ T G V CEELRPD Sbjct: 9 AIKKACNYVGGQSEMAKRLGISPPTVNQWINGTRKIPARRCPEIEKVTSGVVRCEELRPD 68 Query: 67 IDWSYLR 73 +DWSYLR Sbjct: 69 VDWSYLR 75 >UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R7Y7_XYLFA Length = 101 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/68 (55%), Positives = 45/68 (66%) Query: 16 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRS 75 G S +AR+L VS +V WI G + +P ERCPAIERAT V CEELRPD+DW YLR + Sbjct: 12 GRASQLARMLSVSSTTVANWISGKKPIPPERCPAIERATVRAVTCEELRPDVDWEYLRGT 71 Query: 76 ACCSQNMS 83 A Q S Sbjct: 72 AAIDQAKS 79 >UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator n=2 Tax=Pasteurellaceae RepID=A4NID4_HAEIN Length = 75 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK +Y KQ G + +A+ +G +V W KG +++P RCP IER T G+V C Sbjct: 1 MKLRDYFEKQG---RGSLTYLAKQMGAKTSNVCLWAKGKKKVPTNRCPDIERITEGKVTC 57 Query: 61 EELRPDIDWSYLRRS 75 EELRPD++W LR S Sbjct: 58 EELRPDVNWGVLRNS 72 >UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_ACIBT Length = 82 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 3/84 (3%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + +F A G SA+AR +GV+P + ++W ++P +RC IE T+G+V Sbjct: 1 MTTPHEAFNNAVTFAGSISALARKIGVTPWAASKW--NPEKIPEDRCLKIEEITQGQVKA 58 Query: 61 EELRPDIDWSYLRRSACCSQNMSV 84 E+LRPDI+W Y+R++ QN SV Sbjct: 59 EQLRPDINWEYVRKN-LKKQNQSV 81 >UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPM4_ACIAC Length = 86 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 43/69 (62%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + ++A GG + +A L + +V W G RQLPAE CP +ER G V CE+LRPD Sbjct: 3 AIQRAIQGAGGPAKVAHELRCTVQAVCFWRDGKRQLPAEHCPVLERLNDGAVRCEDLRPD 62 Query: 67 IDWSYLRRS 75 +DW+Y+R S Sbjct: 63 VDWAYIRSS 71 >UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1S9_ACIDE Length = 81 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + QAC +G Q+ +A+ + V+P V+QW GVR +P + C AIERAT G V +LRPD Sbjct: 6 AIHQACEQLGSQAGLAKAIDVAPAIVHQWRSGVRPVPVQHCLAIERATNGAVSRRDLRPD 65 Query: 67 IDWSYL 72 DW + Sbjct: 66 -DWHLI 70 >UniRef50_A4JD18 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JD18_BURVG Length = 97 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 43/72 (59%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N S +A G SAMAR LG+S +V Q K ++PAE CP IER G V CE+L Sbjct: 22 NDSIDRAVKHFGSMSAMARHLGLSSYTVIQQWKIAGRVPAEHCPNIERLCGGVVRCEDLN 81 Query: 65 PDIDWSYLRRSA 76 +DW+++R SA Sbjct: 82 DRVDWAFVRASA 93 >UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax=Haemophilus somnus 2336 RepID=B0UTL6_HAES2 Length = 81 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + K+ +VG Q+ +A+L VS PS++ W+KG ++ + P++ +AT GEV E+LRPD Sbjct: 4 NIKKTINLVGTQTKLAKLCSVSQPSISIWLKG-GKMDVKYIPSLIKATNGEVTPEDLRPD 62 Query: 67 IDWSYLRR 74 +DW +R+ Sbjct: 63 VDWEVIRQ 70 >UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemophilus influenzae NT127 RepID=C9MCU9_HAEIN Length = 81 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDW 69 +A + G QSA+AR GVS P+VN W+ G ++ + P+I +AT+ EV ELRPD+DW Sbjct: 10 KAIEICGSQSALARACGVSQPTVNLWLNG-GKMDVKYIPSIIQATKFEVNPTELRPDVDW 68 Query: 70 SYLRRS 75 + S Sbjct: 69 PTIYES 74 >UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax=Haemophilus influenzae RepID=C4F662_HAEIN Length = 78 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 41/68 (60%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 ++A + G Q ++A+ GVS +VN+W+ G + + P+I +AT+ EV ELRPD+ Sbjct: 4 IERAVEICGKQKSLAKACGVSQQAVNKWVSGKNNMDVKYIPSIIQATKFEVNPTELRPDV 63 Query: 68 DWSYLRRS 75 DW + S Sbjct: 64 DWPTIYES 71 >UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHG9_9NEIS Length = 66 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 37/57 (64%) Query: 11 ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 A V+G Q+++A+ LGV P +VN W +G ++PAE IE+ T V ++LRPD+ Sbjct: 8 AANVIGSQASLAKELGVHPTTVNSWARGRNKIPAETAIKIEKLTNSVVTRQDLRPDL 64 >UniRef50_B4YK26 Putative uncharacterized protein n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK26_9BURK Length = 79 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 8/77 (10%) Query: 1 MKKEN----YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRG 56 MKK+N S A VG Q+ +A LL VS ++ QW + ++P E CP IE+ T Sbjct: 1 MKKKNPRIEESLNAAAKAVGNQARLAELLDVSSSAIWQWKQS--EVPPEHCPEIEKLTG- 57 Query: 57 EVLCEELRPDIDWSYLR 73 + CE L +DWSYLR Sbjct: 58 -IRCENLNSTVDWSYLR 73 >UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5W3_PSEP1 Length = 82 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 40/70 (57%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 K + K+A V+G Q+ +AR L V+ P+VNQW G R +PA+R IE T G V + Sbjct: 2 KSAEAAKEASRVLGSQAELARRLNVAAPTVNQWCSGERTVPAKRALQIEALTNGAVNRAD 61 Query: 63 LRPDIDWSYL 72 L P W+ + Sbjct: 62 LCPSFPWNQI 71 >UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella RepID=C5BBP1_EDWI9 Length = 71 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (61%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N K+A A+ GGQ +AR GV PSV++W++G ++ A IE AT G++L +R Sbjct: 3 NSLIKEAIALAGGQQELARSCGVRQPSVSEWLRGKKKPSAISAKRIELATGGKILAINIR 62 Query: 65 PDI 67 PD+ Sbjct: 63 PDL 65 >UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7H4_ACIF2 Length = 69 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 4/53 (7%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +GG +A+ARL+G++ +V+QW + +P ++ IERAT G + +ELRPDI Sbjct: 10 LGGPTAVARLIGITKGAVSQW----KAIPVDKAILIERATHGSITRQELRPDI 58 >UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSE2_PSEPG Length = 74 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLR 73 G +A AR G S + Q G R+ A +++R T G + CEE+RPDIDW+YLR Sbjct: 14 GLAAFARHCGTSAGQLKQVAYGNRRASAGLAVSLDRETGGVIRCEEMRPDIDWAYLR 70 >UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q6JIG9_9CAUD Length = 104 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Query: 11 ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRG-EVLCEELRPDID- 68 A ++ Q+ AR +GVSP + + WIK R+ P E CP +ERA V+CE LRPD Sbjct: 22 AVSLCDSQADFARRVGVSPQAASNWIKRDRRAPIEACPFVERAVDDPRVVCETLRPDYQG 81 Query: 69 WSYLR 73 W LR Sbjct: 82 WVVLR 86 >UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JAE0_ACIF2 Length = 74 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 32/50 (64%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q+ +AR LGV+P V+QWI G + AER IE +T G V ELRPDI Sbjct: 12 QTLLARKLGVTPGLVSQWITGRTVITAERAAQIELSTNGAVTRAELRPDI 61 >UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R0L1_XYLFA Length = 79 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +G SA+A LGV +++ W + ++PAERC IER T G V+C ELRPD+ Sbjct: 11 LGSVSALAASLGVRQSAISNW-RARGRVPAERCIDIERVTNGAVICRELRPDV 62 >UniRef50_C5A7V7 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A7V7_BURGB Length = 93 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 K A GG SA+A LG+S ++ +I+ P E CP IE+ ++G+V CE L + Sbjct: 14 LKDAVKQAGGASALAEHLGLSRGAIYDFIRRGNFNP-EHCPEIEKFSQGKVRCEVLNNRV 72 Query: 68 DWSYLR 73 DW+++R Sbjct: 73 DWAFIR 78 >UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=Neisseria gonorrhoeae FA19 RepID=UPI0001AF7BFA Length = 76 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 36/59 (61%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + CA+ G QS +AR G+SP ++Q KG++ +P + IE++T G V +E+ PD Sbjct: 3 LRDYCAIRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAALIEKSTNGRVTRKEMFPD 61 >UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobacteria RepID=B4EWP1_PROMH Length = 83 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 38/60 (63%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 ++A +VGGQSA+AR + +V W+ ++PAE IE+AT+G+V +LRPDI Sbjct: 11 LRRAIDLVGGQSALARAINSKQQNVWFWLNKSGRVPAEFVLPIEQATQGQVTRSQLRPDI 70 >UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A1VPJ4_POLNA Length = 187 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 44 AERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNM-SVKQLNDSNKSSFDHT 98 AE C IER + V+CE LRPDIDW+ +R +A SQ ++ + + K++ H Sbjct: 42 AELCINIERESLKSVVCEVLRPDIDWASIRHTAPASQAQEAINTVAEEAKAAILHV 97 >UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisseria gonorrhoeae RepID=C1HWP2_NEIGO Length = 78 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 S ++A G +S +AR +GV P+V W K P RC IE+ T G V ++LRPD Sbjct: 4 SIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPD 63 Query: 67 IDWSYL 72 DW + Sbjct: 64 -DWHLI 68 >UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteobacteria RepID=Q1QIT7_NITHX Length = 260 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 6/61 (9%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 +A V GGQ+ +AR +G+S PSV+ W ++PAER A+E T L ELRPD Sbjct: 5 GLDRAIQVAGGQAELARRIGISQPSVSNW----NRVPAERVIAVEAVTGISRL--ELRPD 58 Query: 67 I 67 + Sbjct: 59 L 59 >UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q6B7_PROST Length = 75 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N + K A +VG Q + G++ +V +W+ ++ E P I +AT G+V +++R Sbjct: 2 NEAIKTAIEIVGTQKKLGEACGITQQAVFKWLHNKAKVSPEHIPLIVKATNGQVKGKDIR 61 Query: 65 PDI 67 PD+ Sbjct: 62 PDL 64 >UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa RepID=Q9PBL8_XYLFA Length = 81 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +A V+G Q A+A LLG+ P V+QW+ R++ IE AT + +LRPDI Sbjct: 7 IARAVEVLGSQKALADLLGIHPALVSQWVTSRRRVAPRHVLTIESAT--SISRHDLRPDI 64 >UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepID=Q2L2G5_BORA1 Length = 87 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 16 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 G Q A+A+ +GV P V++W++G R +P E AIE AT G V ++ PD Sbjct: 12 GRQIALAKAIGVHAPDVSRWVRGKRPIPLEYGAAIEIATGGAVTRKDEWPD 62 >UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q0AG04_NITEC Length = 83 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 23/38 (60%) Query: 38 GVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRS 75 G R+ C IER + G V CE LRPD+DW YLR S Sbjct: 35 GYRRAGELLCINIERESGGLVKCETLRPDVDWGYLRNS 72 >UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TN00_ACIAC Length = 80 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 + A + +GG +A +GV +V+ W A C AIERAT G V +LRPD Sbjct: 4 LEAAISAIGGVGKLAEAIGVGQSAVSNWRARGTTPDAAYCVAIERATSGAVSRRDLRPD- 62 Query: 68 DWSYL 72 DW + Sbjct: 63 DWHLI 67 >UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A4N1A6_HAEIN Length = 67 Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 16 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 G Q+ AR +G++P ++Q I G + P AIE+AT+ +V E+ PD+ Sbjct: 13 GFQADFARKIGIAPSFLSQIISGKSKAPPSVAVAIEKATKRQVKKSEILPDV 64 >UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVZ4_9BACT Length = 85 Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 ++A +VG Q+ +A++LG + W+K + AE +E+AT G V ELRPD+ Sbjct: 7 LRKAIEIVGSQNKLAKILGKRQSVIWAWLKR-GTVSAEYVLKVEQATGGRVTRHELRPDL 65 >UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Arsenophonus nasoniae RepID=D2U108_9ENTR Length = 72 Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 +NY + A + G Q A+A+ G++ ++ W+ G + + + P + T G V Sbjct: 2 KNYGIEAAIKIAGSQKALAKKCGLAQSTICDWLNGKKPVSPKSVPDLVEVTGGTVPAYRF 61 Query: 64 RPDI 67 RPD+ Sbjct: 62 RPDL 65 >UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8R3_9GAMM Length = 70 Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 E K+A ++ GQ A+A+ +GV+ ++ WI +PAE IE T V EL Sbjct: 3 EQNPLKKAISIAQGQKALAKKIGVTQQCISLWITKNAAVPAEHAIKIE--TETGVSRAEL 60 Query: 64 RPDI 67 RPD+ Sbjct: 61 RPDL 64 >UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7N1J7_PHOLL Length = 94 Score = 38.9 bits (89), Expect = 0.049, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 16 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDW 69 G +A LGVS ++Q G +P RC IE AT G+V ++LRP DW Sbjct: 32 GEAKLLAEKLGVSSSYLSQMAHGYAPVPPARCFDIENATNGKVTRQDLRPH-DW 84 >UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEC1_METSD Length = 81 Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 14 VVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 + GG+ A+A L +S ++++W+K R +P ER +E ++ E+RPDI Sbjct: 19 IEGGRPALAAALDISEQAIHKWVKSGR-IPTERVRDVEELINFQITRYEMRPDI 71 >UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IT79_METNO Length = 83 Score = 38.1 bits (87), Expect = 0.093, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%) Query: 11 ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 A +VG Q +AR G+S V++ + RQ+ A AIE+AT G++ +LRPD Sbjct: 10 AIDIVGSQPKLARAAGISQQQVSKLLHCQRQISAGVAIAIEKATAGKIGRWQLRPD 65 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=... 164 1e-39 UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli ... 159 2e-38 UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH... 115 6e-25 UniRef50_A4JD18 Putative uncharacterized protein n=1 Tax=Burkhol... 105 4e-22 UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovo... 101 1e-20 UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella... 99 3e-20 UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemoph... 99 3e-20 UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_A... 99 4e-20 UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator ... 98 7e-20 UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax... 95 6e-19 UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisser... 91 7e-18 UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax... 91 9e-18 UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovo... 89 4e-17 UniRef50_C5A7V7 Putative uncharacterized protein n=1 Tax=Burkhol... 89 6e-17 UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkhol... 86 2e-16 UniRef50_B4YK26 Putative uncharacterized protein n=1 Tax=Tetrath... 84 1e-15 UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudom... 83 3e-15 UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobac... 82 5e-15 UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q... 81 9e-15 UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingell... 81 1e-14 UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella Re... 81 1e-14 UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudom... 81 1e-14 UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=... 79 3e-14 UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteob... 78 1e-13 UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella... 76 4e-13 UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro f... 74 1e-12 UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro f... 71 1e-11 Sequences not found previously or not previously below threshold: UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Provide... 76 4e-13 UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Ars... 76 4e-13 UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovo... 72 5e-12 UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptosp... 72 6e-12 UniRef50_B7LNE3 Represror Cro n=6 Tax=Escherichia RepID=B7LNE3_E... 69 5e-11 UniRef50_A7MHP9 Putative uncharacterized protein n=1 Tax=Cronoba... 68 6e-11 UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoa... 67 2e-10 UniRef50_B7LB93 Cro n=22 Tax=root RepID=B7LB93_ECO55 66 4e-10 UniRef50_B4SNJ4 CI repressor n=1 Tax=Stenotrophomonas maltophili... 66 5e-10 UniRef50_B7LJJ9 Putative uncharacterized protein n=1 Tax=Escheri... 64 1e-09 UniRef50_C6AM32 Antirepressor Cro n=5 Tax=root RepID=C6AM32_AGGAN 64 2e-09 UniRef50_C4K7L6 Phage transcriptional regulatory protein n=1 Tax... 63 2e-09 UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS ... 63 3e-09 UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteob... 62 5e-09 UniRef50_D2U112 Phage regulatory protein n=1 Tax=Arsenophonus na... 61 9e-09 UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylo... 61 1e-08 UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella... 61 1e-08 UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepI... 61 2e-08 UniRef50_D1NX87 Cytoplasmic chaperone TorD n=1 Tax=Providencia r... 59 4e-08 UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickett... 59 5e-08 UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkhol... 58 8e-08 UniRef50_A5UGL7 Putative uncharacterized protein n=5 Tax=Pasteur... 58 8e-08 UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemoph... 58 1e-07 UniRef50_A6WVE7 Putative uncharacterized protein n=1 Tax=Ochroba... 58 1e-07 UniRef50_A9N3H0 Putative uncharacterized protein n=3 Tax=Enterob... 57 2e-07 UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Esch... 57 2e-07 UniRef50_Q4FUH4 Putative uncharacterized protein n=1 Tax=Psychro... 57 2e-07 UniRef50_B5XSM1 Putative uncharacterized protein n=2 Tax=Enterob... 56 5e-07 UniRef50_Q37907 Regulatory protein cro n=3 Tax=root RepID=RCRO_BPD3 55 6e-07 UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteur... 55 8e-07 UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp... 54 1e-06 UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkhol... 54 1e-06 UniRef50_D0ZSX1 Putative uncharacterized protein n=1 Tax=Salmone... 54 1e-06 UniRef50_A9YWX8 Putative Cro n=1 Tax=Burkholderia phage Bups phi... 54 2e-06 UniRef50_C0AX08 Putative uncharacterized protein n=1 Tax=Proteus... 54 2e-06 UniRef50_C7LJH3 Phage related protein n=1 Tax=Brucella microti C... 54 2e-06 UniRef50_B8F4M6 Phage transcriptional regulatory protein/antirep... 52 4e-06 UniRef50_B7KSY7 Putative chaperone n=1 Tax=Methylobacterium chlo... 52 4e-06 UniRef50_B1G5M8 Putative uncharacterized protein n=1 Tax=Burkhol... 52 5e-06 UniRef50_C3X1S2 Predicted protein n=1 Tax=Oxalobacter formigenes... 52 7e-06 UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acineto... 52 7e-06 UniRef50_UPI00016AD132 hypothetical protein Bpse38_34097 n=1 Tax... 52 7e-06 UniRef50_B7KYS5 Putative uncharacterized protein n=1 Tax=Methylo... 51 9e-06 UniRef50_D0FT83 Lambda repressor-like protein n=1 Tax=Erwinia py... 51 1e-05 UniRef50_Q93E25 LygE n=1 Tax=Salmonella enterica subsp. enterica... 51 1e-05 UniRef50_D2TX41 Phage regulatory protein n=1 Tax=Arsenophonus na... 49 3e-05 UniRef50_C8U3E2 Predicted antirepressor protein Cro n=1 Tax=Esch... 49 3e-05 UniRef50_UPI0001B52E27 hypothetical protein ShiD9_12110 n=1 Tax=... 49 4e-05 UniRef50_Q6J1N2 Gp45 n=1 Tax=Burkholderia phage BcepC6B RepID=Q6... 49 4e-05 UniRef50_B1J5K2 Putative uncharacterized protein n=1 Tax=Pseudom... 49 5e-05 UniRef50_C8U3V4 Predicted antirepressor protein Cro n=19 Tax=Ent... 48 7e-05 UniRef50_C5CJM5 Putative uncharacterized protein n=1 Tax=Variovo... 48 9e-05 UniRef50_C7BGF8 Putative uncharacterized protein n=2 Tax=root Re... 47 1e-04 UniRef50_C8UC34 Predicted antirepressor protein Cro n=2 Tax=Esch... 46 3e-04 UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protei... 46 3e-04 UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, p... 46 3e-04 UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID... 46 4e-04 UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX 46 5e-04 UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria ... 45 6e-04 UniRef50_B0VKG4 Putative uncharacterized protein n=3 Tax=Acineto... 45 6e-04 UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigi... 45 7e-04 UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax... 45 8e-04 UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovo... 45 8e-04 UniRef50_A7C750 Putative uncharacterized protein n=1 Tax=Beggiat... 44 0.001 UniRef50_Q2P3J1 Phage-related protein n=1 Tax=Xanthomonas oryzae... 44 0.002 UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterob... 44 0.002 UniRef50_P14816 Gene 30 protein n=2 Tax=root RepID=VG30_BPPH8 44 0.002 UniRef50_A9BV81 Putative uncharacterized protein n=1 Tax=Delftia... 44 0.002 UniRef50_C4TVB5 Gp45 n=1 Tax=Yersinia kristensenii ATCC 33638 Re... 44 0.002 UniRef50_C4U3C1 Putative uncharacterized protein n=1 Tax=Yersini... 43 0.002 UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID... 43 0.002 UniRef50_C6XEC2 Putative phage repressor n=1 Tax=Methylovorus sp... 43 0.003 UniRef50_A1W3Z6 Putative uncharacterized protein n=2 Tax=Acidovo... 42 0.005 UniRef50_B1M2M6 Transcriptional regulator, XRE family n=1 Tax=Me... 42 0.006 UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_... 42 0.006 UniRef50_B8IIS9 Putative plasmid maintenance system antidote pro... 42 0.008 UniRef50_B8INW8 Transcriptional regulator, XRE family n=1 Tax=Me... 42 0.008 UniRef50_D2UAK5 Hypothetical phage-related protein n=2 Tax=Xanth... 41 0.018 UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeri... 40 0.029 UniRef50_Q1DAJ1 Putative transposase n=1 Tax=Myxococcus xanthus ... 39 0.041 UniRef50_A3IX74 Zinc finger protein n=1 Tax=Cyanothece sp. CCY01... 38 0.099 >UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=YDAS_ECOLI Length = 98 Score = 164 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 98/98 (100%), Positives = 98/98 (100%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC Sbjct: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 Query: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT Sbjct: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 >UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli RepID=C8U5T9_ECO10 Length = 114 Score = 159 bits (402), Expect = 2e-38, Method: Composition-based stats. Identities = 83/98 (84%), Positives = 90/98 (91%), Gaps = 4/98 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKK+NYSFK+ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERAT+G VLC Sbjct: 8 MKKDNYSFKRACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATKGGVLC 67 Query: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 EELRPD+DW+YLRRS+C SQNMS+KQ ND N DHT Sbjct: 68 EELRPDVDWTYLRRSSCYSQNMSMKQPNDEN----DHT 101 >UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH8_PROMH Length = 79 Score = 115 bits (287), Expect = 6e-25, Method: Composition-based stats. Identities = 45/69 (65%), Positives = 55/69 (79%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + K+AC VGGQS MA+ LG+SPP+VNQWI G R++PA RCP IE+ T G V CEELRPD Sbjct: 9 AIKKACNYVGGQSEMAKRLGISPPTVNQWINGTRKIPARRCPEIEKVTSGVVRCEELRPD 68 Query: 67 IDWSYLRRS 75 +DWSYLR + Sbjct: 69 VDWSYLRGT 77 >UniRef50_A4JD18 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JD18_BURVG Length = 97 Score = 105 bits (262), Expect = 4e-22, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 43/72 (59%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N S +A G SAMAR LG+S +V Q K ++PAE CP IER G V CE+L Sbjct: 22 NDSIDRAVKHFGSMSAMARHLGLSSYTVIQQWKIAGRVPAEHCPNIERLCGGVVRCEDLN 81 Query: 65 PDIDWSYLRRSA 76 +DW+++R SA Sbjct: 82 DRVDWAFVRASA 93 >UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPM4_ACIAC Length = 86 Score = 101 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 43/69 (62%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + ++A GG + +A L + +V W G RQLPAE CP +ER G V CE+LRPD Sbjct: 3 AIQRAIQGAGGPAKVAHELRCTVQAVCFWRDGKRQLPAEHCPVLERLNDGAVRCEDLRPD 62 Query: 67 IDWSYLRRS 75 +DW+Y+R S Sbjct: 63 VDWAYIRSS 71 >UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R7Y7_XYLFA Length = 101 Score = 99.5 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 38/71 (53%), Positives = 45/71 (63%) Query: 13 AVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYL 72 G S +AR+L VS +V WI G + +P ERCPAIERAT V CEELRPD+DW YL Sbjct: 9 QERGRASQLARMLSVSSTTVANWISGKKPIPPERCPAIERATVRAVTCEELRPDVDWEYL 68 Query: 73 RRSACCSQNMS 83 R +A Q S Sbjct: 69 RGTAAIDQAKS 79 >UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemophilus influenzae NT127 RepID=C9MCU9_HAEIN Length = 81 Score = 99.5 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + +A + G QSA+AR GVS P+VN W+ G ++ + P+I +AT+ EV Sbjct: 1 MSSMSEYVNKAIEICGSQSALARACGVSQPTVNLWLNG-GKMDVKYIPSIIQATKFEVNP 59 Query: 61 EELRPDIDWSYLRRS 75 ELRPD+DW + S Sbjct: 60 TELRPDVDWPTIYES 74 >UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_ACIBT Length = 82 Score = 99.1 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + +F A G SA+AR +GV+P + ++W ++P +RC IE T+G+V Sbjct: 1 MTTPHEAFNNAVTFAGSISALARKIGVTPWAASKW--NPEKIPEDRCLKIEEITQGQVKA 58 Query: 61 EELRPDIDWSYLRRSACCSQNMSVK 85 E+LRPDI+W Y+R++ QN SV Sbjct: 59 EQLRPDINWEYVRKN-LKKQNQSVS 82 >UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator n=2 Tax=Pasteurellaceae RepID=A4NID4_HAEIN Length = 75 Score = 98.3 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK +Y KQ G + +A+ +G +V W KG +++P RCP IER T G+V C Sbjct: 1 MKLRDYFEKQG---RGSLTYLAKQMGAKTSNVCLWAKGKKKVPTNRCPDIERITEGKVTC 57 Query: 61 EELRPDIDWSYLRRS 75 EELRPD++W LR S Sbjct: 58 EELRPDVNWGVLRNS 72 >UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax=Haemophilus influenzae RepID=C4F662_HAEIN Length = 78 Score = 95.3 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 41/70 (58%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 ++A + G Q ++A+ GVS +VN+W+ G + + P+I +AT+ EV ELRP Sbjct: 2 SGIERAVEICGKQKSLAKACGVSQQAVNKWVSGKNNMDVKYIPSIIQATKFEVNPTELRP 61 Query: 66 DIDWSYLRRS 75 D+DW + S Sbjct: 62 DVDWPTIYES 71 >UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisseria gonorrhoeae RepID=C1HWP2_NEIGO Length = 78 Score = 91.4 bits (225), Expect = 7e-18, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 S ++A G +S +AR +GV P+V W K P RC IE+ T G V ++LRPD Sbjct: 4 SIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPD 63 Query: 67 IDWSYLRRSACCSQNM 82 DW + Q Sbjct: 64 -DWHLIWPELAGDQPK 78 >UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax=Haemophilus somnus 2336 RepID=B0UTL6_HAES2 Length = 81 Score = 91.0 bits (224), Expect = 9e-18, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 + + K+ +VG Q+ +A+L VS PS++ W+KG ++ + P++ +AT GEV E+LR Sbjct: 2 DKNIKKTINLVGTQTKLAKLCSVSQPSISIWLKG-GKMDVKYIPSLIKATNGEVTPEDLR 60 Query: 65 PDIDWSYLRR 74 PD+DW +R+ Sbjct: 61 PDVDWEVIRQ 70 >UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1S9_ACIDE Length = 81 Score = 89.1 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 + QAC +G Q+ +A+ + V+P V+QW GVR +P + C AIERAT G V +LRP Sbjct: 5 QAIHQACEQLGSQAGLAKAIDVAPAIVHQWRSGVRPVPVQHCLAIERATNGAVSRRDLRP 64 Query: 66 DIDWSYL 72 D DW + Sbjct: 65 D-DWHLI 70 >UniRef50_C5A7V7 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A7V7_BURGB Length = 93 Score = 88.7 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 K A GG SA+A LG+S ++ +I+ P E CP IE+ ++G+V CE L + Sbjct: 14 LKDAVKQAGGASALAEHLGLSRGAIYDFIRRGNFNP-EHCPEIEKFSQGKVRCEVLNNRV 72 Query: 68 DWSYLR 73 DW+++R Sbjct: 73 DWAFIR 78 >UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A1VPJ4_POLNA Length = 187 Score = 86.4 bits (212), Expect = 2e-16, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSAC 77 Q A A G + + + +++ AE C IER + V+CE LRPDIDW+ +R +A Sbjct: 16 QKAFALRCGTTVGYLRKAGSTGQRIGAELCINIERESLKSVVCEVLRPDIDWASIRHTAP 75 Query: 78 CSQNM-SVKQLNDSNKSSFDHT 98 SQ ++ + + K++ H Sbjct: 76 ASQAQEAINTVAEEAKAAILHV 97 >UniRef50_B4YK26 Putative uncharacterized protein n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK26_9BURK Length = 79 Score = 84.1 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 8/83 (9%) Query: 1 MKKEN----YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRG 56 MKK+N S A VG Q+ +A LL VS ++ QW + ++P E CP IE+ T Sbjct: 1 MKKKNPRIEESLNAAAKAVGNQARLAELLDVSSSAIWQWKQS--EVPPEHCPEIEKLTG- 57 Query: 57 EVLCEELRPDIDWSYLRRSACCS 79 + CE L +DWSYLR + Sbjct: 58 -IRCENLNSTVDWSYLRGTEPNK 79 >UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5W3_PSEP1 Length = 82 Score = 82.9 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 41/73 (56%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 K + K+A V+G Q+ +AR L V+ P+VNQW G R +PA+R IE T G V + Sbjct: 2 KSAEAAKEASRVLGSQAELARRLNVAAPTVNQWCSGERTVPAKRALQIEALTNGAVNRAD 61 Query: 63 LRPDIDWSYLRRS 75 L P W+ + + Sbjct: 62 LCPSFPWNQIDSN 74 >UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobacteria RepID=B4EWP1_PROMH Length = 83 Score = 82.2 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 38/60 (63%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 ++A +VGGQSA+AR + +V W+ ++PAE IE+AT+G+V +LRPDI Sbjct: 11 LRRAIDLVGGQSALARAINSKQQNVWFWLNKSGRVPAEFVLPIEQATQGQVTRSQLRPDI 70 >UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q6JIG9_9CAUD Length = 104 Score = 81.4 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 11 ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRG-EVLCEELRPDID- 68 A ++ Q+ AR +GVSP + + WIK R+ P E CP +ERA V+CE LRPD Sbjct: 22 AVSLCDSQADFARRVGVSPQAASNWIKRDRRAPIEACPFVERAVDDPRVVCETLRPDYQG 81 Query: 69 WSYLRR 74 W LR+ Sbjct: 82 WVVLRQ 87 >UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHG9_9NEIS Length = 66 Score = 81.0 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 38/62 (61%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 + A V+G Q+++A+ LGV P +VN W +G ++PAE IE+ T V ++LRP Sbjct: 3 DAILLAANVIGSQASLAKELGVHPTTVNSWARGRNKIPAETAIKIEKLTNSVVTRQDLRP 62 Query: 66 DI 67 D+ Sbjct: 63 DL 64 >UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella RepID=C5BBP1_EDWI9 Length = 71 Score = 81.0 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 39/63 (61%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N K+A A+ GGQ +AR GV PSV++W++G ++ A IE AT G++L +R Sbjct: 3 NSLIKEAIALAGGQQELARSCGVRQPSVSEWLRGKKKPSAISAKRIELATGGKILAINIR 62 Query: 65 PDI 67 PD+ Sbjct: 63 PDL 65 >UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSE2_PSEPG Length = 74 Score = 81.0 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 35/59 (59%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRS 75 G +A AR G S + Q G R+ A +++R T G + CEE+RPDIDW+YLR + Sbjct: 14 GLAAFARHCGTSAGQLKQVAYGNRRASAGLAVSLDRETGGVIRCEEMRPDIDWAYLRNA 72 >UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=Neisseria gonorrhoeae FA19 RepID=UPI0001AF7BFA Length = 76 Score = 79.5 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 + CA+ G QS +AR G+SP ++Q KG++ +P + IE++T G V +E+ PD Sbjct: 3 LRDYCAIRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAALIEKSTNGRVTRKEMFPDT 62 Query: 68 DWSYLRRSACCSQNM 82 W + Q Sbjct: 63 -WHLIWPELADDQPK 76 >UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteobacteria RepID=Q1QIT7_NITHX Length = 260 Score = 77.9 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 6/64 (9%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 + +A V GGQ+ +AR +G+S PSV+ W ++PAER A+E T + EL Sbjct: 2 RDSGLDRAIQVAGGQAELARRIGISQPSVSNW----NRVPAERVIAVEAVTG--ISRLEL 55 Query: 64 RPDI 67 RPD+ Sbjct: 56 RPDL 59 >UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R0L1_XYLFA Length = 79 Score = 76.0 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + A +G SA+A LGV +++ W + ++PAERC IER T G V+C ELRPD Sbjct: 3 AIDIAINKLGSVSALAASLGVRQSAISNW-RARGRVPAERCIDIERVTNGAVICRELRPD 61 Query: 67 I 67 + Sbjct: 62 V 62 >UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q6B7_PROST Length = 75 Score = 76.0 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N + K A +VG Q + G++ +V +W+ ++ E P I +AT G+V +++R Sbjct: 2 NEAIKTAIEIVGTQKKLGEACGITQQAVFKWLHNKAKVSPEHIPLIVKATNGQVKGKDIR 61 Query: 65 PDID--W 69 PD+ W Sbjct: 62 PDLPHLW 68 >UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Arsenophonus nasoniae RepID=D2U108_9ENTR Length = 72 Score = 75.6 bits (184), Expect = 4e-13, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 +NY + A + G Q A+A+ G++ ++ W+ G + + + P + T G V Sbjct: 2 KNYGIEAAIKIAGSQKALAKKCGLAQSTICDWLNGKKPVSPKSVPDLVEVTGGTVPAYRF 61 Query: 64 RPDID 68 RPD+ Sbjct: 62 RPDLP 66 >UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JAE0_ACIF2 Length = 74 Score = 74.1 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 26/51 (50%), Positives = 32/51 (62%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q+ +AR LGV+P V+QWI G + AER IE +T G V ELRPDI Sbjct: 11 SQTLLARKLGVTPGLVSQWITGRTVITAERAAQIELSTNGAVTRAELRPDI 61 >UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TN00_ACIAC Length = 80 Score = 72.1 bits (175), Expect = 5e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 + A + +GG +A +GV +V+ W A C AIERAT G V +LRPD Sbjct: 4 LEAAISAIGGVGKLAEAIGVGQSAVSNWRARGTTPDAAYCVAIERATSGAVSRRDLRPD- 62 Query: 68 DWSYL 72 DW + Sbjct: 63 DWHLI 67 >UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVZ4_9BACT Length = 85 Score = 71.8 bits (174), Expect = 6e-12, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 K ++A +VG Q+ +A++LG + W+K + AE +E+AT G V E Sbjct: 2 KPTSPLRKAIEIVGSQNKLAKILGKRQSVIWAWLK-RGTVSAEYVLKVEQATGGRVTRHE 60 Query: 63 LRPDI 67 LRPD+ Sbjct: 61 LRPDL 65 >UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7H4_ACIF2 Length = 69 Score = 70.6 bits (171), Expect = 1e-11, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 4/56 (7%) Query: 12 CAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +GG +A+ARL+G++ +V+QW + +P ++ IERAT G + +ELRPDI Sbjct: 7 IKSLGGPTAVARLIGITKGAVSQW----KAIPVDKAILIERATHGSITRQELRPDI 58 >UniRef50_B7LNE3 Represror Cro n=6 Tax=Escherichia RepID=B7LNE3_ESCF3 Length = 77 Score = 68.7 bits (166), Expect = 5e-11, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M N + + A ++ G Q +A L GV+ P+V +W+ G + A I AT G++ Sbjct: 1 MIMTNQTIQLAISITGSQKRLADLCGVAQPTVWRWLHGGG-IDARYVMKIVSATGGKIKP 59 Query: 61 EELRPDI 67 ++RPD+ Sbjct: 60 ADIRPDL 66 >UniRef50_A7MHP9 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MHP9_ENTS8 Length = 73 Score = 68.3 bits (165), Expect = 6e-11, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 8/73 (10%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLG------VSPPSVNQWIKGVRQLPAERCPAIERAT 54 M E + +A + GGQS +AR + V V W+ ++ P + +IE+ T Sbjct: 1 MTPEQSALTEAIEIAGGQSELARKISLEAGGLVKQQQVWNWLHREKKAPIKHTVSIEKLT 60 Query: 55 RGEVLCEELRPDI 67 V E+LRPD+ Sbjct: 61 G--VPKEKLRPDV 71 >UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8R3_9GAMM Length = 70 Score = 67.1 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M ++N K+A ++ GQ A+A+ +GV+ ++ WI +PAE IE T V Sbjct: 1 MTEQN-PLKKAISIAQGQKALAKKIGVTQQCISLWITKNAAVPAEHAIKIETETG--VSR 57 Query: 61 EELRPDI 67 ELRPD+ Sbjct: 58 AELRPDL 64 >UniRef50_B7LB93 Cro n=22 Tax=root RepID=B7LB93_ECO55 Length = 76 Score = 66.0 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N + K A +VG Q + VS +V +W+ ++ E +I AT G V ++R Sbjct: 2 NPAIKTAINIVGSQKKLGAACEVSQQAVYKWLHNKAKVSPEHVGSIVTATGGVVKAYQIR 61 Query: 65 PDID 68 PD+ Sbjct: 62 PDLP 65 >UniRef50_B4SNJ4 CI repressor n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNJ4_STRM5 Length = 143 Score = 65.6 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 + +A GG +++A LGV +V+ W + ++P IE T V +L P Sbjct: 2 DALDRAVKAAGGVTSLATHLGVRQSAVSNW-RSRGRVPPAMAIPIESVTG--VSRHDLCP 58 Query: 66 DI 67 DI Sbjct: 59 DI 60 >UniRef50_B7LJJ9 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LJJ9_ESCF3 Length = 82 Score = 64.4 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLG------VSPPSVNQWIKGVRQLPAERCPAIERAT 54 M E + +A A+ GGQS +AR L V V W+ ++ PA+ IE+ T Sbjct: 1 MTPEQLALSEAIALAGGQSELARKLTASSGHLVKQQHVWNWLNREKRPPAKLSIFIEKTT 60 Query: 55 RGEVLCEELRPDI 67 + E+LRPDI Sbjct: 61 G--ISKEKLRPDI 71 >UniRef50_C6AM32 Antirepressor Cro n=5 Tax=root RepID=C6AM32_AGGAN Length = 70 Score = 63.7 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 1/60 (1%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 +N + ++A ++ G Q +++ GVS SV+ W+ G + A+ P I +AT+G+V +++ Sbjct: 2 KNEAIEKAISICGSQVKLSQECGVSQVSVSFWLNGGG-INAKYIPRIVKATKGKVTEKQI 60 >UniRef50_C4K7L6 Phage transcriptional regulatory protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K7L6_HAMD5 Length = 152 Score = 63.3 bits (152), Expect = 2e-09, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N + K+A +V GQ +A L GV P+V +W+ G + +I ++ GE+ EL Sbjct: 2 NKAIKKAIKIVRGQKKLADLCGVKQPTVWRWLHGGG-ITFRYLKSIVESSGGEIKPHELN 60 Query: 65 PDIDWSYLRRSACCSQNMSVKQLND 89 D + YL + SQ + D Sbjct: 61 KDFE-KYLFINMIFSQCRAKSNPKD 84 >UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7N1J7_PHOLL Length = 94 Score = 62.9 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 8/74 (10%) Query: 1 MKKENY--SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 MK +Y + K+ G +A LGVS ++Q G +P RC IE AT G+V Sbjct: 20 MKLNDYISNLKR-----GEAKLLAEKLGVSSSYLSQMAHGYAPVPPARCFDIENATNGKV 74 Query: 59 LCEELRPDIDWSYL 72 ++LRP DW + Sbjct: 75 TRQDLRPH-DWQKI 87 >UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q0AG04_NITEC Length = 83 Score = 62.1 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 28/61 (45%) Query: 20 AMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCS 79 A S + G R+ C IER + G V CE LRPD+DW YLR S + Sbjct: 17 DFAVCCETSFAHLRNIAYGYRRAGELLCINIERESGGLVKCETLRPDVDWGYLRNSRPQT 76 Query: 80 Q 80 + Sbjct: 77 K 77 >UniRef50_D2U112 Phage regulatory protein n=1 Tax=Arsenophonus nasoniae RepID=D2U112_9ENTR Length = 78 Score = 61.4 bits (147), Expect = 9e-09, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKG-VRQLPAERCPAIERATRGEVLCEELR 64 + K+ V G + +A LGVS +V+QW ++P +R AI T + ELR Sbjct: 2 SALKKVINVTGTATRLAAALGVSNMTVSQWKNKYKGRVPVDRVLAIYELTG--ITPHELR 59 Query: 65 PDI 67 PDI Sbjct: 60 PDI 62 >UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IT79_METNO Length = 83 Score = 61.4 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 + A +VG Q +AR G+S V++ + RQ+ A AIE+AT G++ +L Sbjct: 3 RHPHIALAIDIVGSQPKLARAAGISQQQVSKLLHCQRQISAGVAIAIEKATAGKIGRWQL 62 Query: 64 RPDIDW 69 RPD W Sbjct: 63 RPDY-W 67 >UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa RepID=Q9PBL8_XYLFA Length = 81 Score = 61.0 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +A V+G Q A+A LLG+ P V+QW+ R++ IE AT + +LRPDI Sbjct: 7 IARAVEVLGSQKALADLLGIHPALVSQWVTSRRRVAPRHVLTIESAT--SISRHDLRPDI 64 >UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepID=Q2L2G5_BORA1 Length = 87 Score = 60.6 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 32/54 (59%) Query: 13 AVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 G Q A+A+ +GV P V++W++G R +P E AIE AT G V ++ PD Sbjct: 9 QKRGRQIALAKAIGVHAPDVSRWVRGKRPIPLEYGAAIEIATGGAVTRKDEWPD 62 >UniRef50_D1NX87 Cytoplasmic chaperone TorD n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NX87_9ENTR Length = 78 Score = 59.0 bits (141), Expect = 4e-08, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 8/67 (11%) Query: 7 SFKQACAVVGGQSAMARLLG------VSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 ++A GGQ+ +A+ + V + W+ +++PA++ +ERA+ V Sbjct: 12 GLQKAIDATGGQTQLAKRISDISNKPVKQQQIWNWLNRNKRVPADKVLIVERASG--VSR 69 Query: 61 EELRPDI 67 LRPD+ Sbjct: 70 NTLRPDL 76 >UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PM33_9COXI Length = 296 Score = 58.7 bits (140), Expect = 5e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 29/58 (50%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 +A +G MA+ LG+ + WIKG ++P E IE T GE+ ++L P Sbjct: 6 LDKAIYSLGSVRHMAKKLGIHREHIYAWIKGFSKIPLEYALQIEYLTGGEINWKDLVP 63 >UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMH8_BURVG Length = 94 Score = 58.3 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 21 MARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYL 72 A G + + I G R+ + C AIER + G V +LRPD DW + Sbjct: 32 FAARCGTTAAFLRNVIYGQRKAGEKLCVAIERESGGVVTRRDLRPD-DWHLI 82 >UniRef50_A5UGL7 Putative uncharacterized protein n=5 Tax=Pasteurellaceae RepID=A5UGL7_HAEIG Length = 68 Score = 58.3 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 +N + A G Q +A GV+ +V W+KG + + P I +A+ G+V ++ Sbjct: 2 QNETINLAIQECGTQKKLANACGVTQGAVALWLKGGG-INGKYIPLIAKASNGKVTETDI 60 >UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A4N1A6_HAEIN Length = 67 Score = 57.5 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + Y + G Q+ AR +G++P ++Q I G + P AIE+AT+ +V Sbjct: 1 MSLKAYFSDKP---RGFQADFARKIGIAPSFLSQIISGKSKAPPSVAVAIEKATKRQVKK 57 Query: 61 EELRPDI 67 E+ PD+ Sbjct: 58 SEILPDV 64 >UniRef50_A6WVE7 Putative uncharacterized protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVE7_OCHA4 Length = 79 Score = 57.5 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 +A VGG A+AR L + ++ W +++PAER IER + + ELRP Sbjct: 18 EIVAKAAEEVGGVVALARALNIKHTAMYSW----KRVPAERVLEIERVSG--ISRHELRP 71 Query: 66 DI 67 D+ Sbjct: 72 DL 73 >UniRef50_A9N3H0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A9N3H0_SALPB Length = 85 Score = 57.1 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKG-VRQLPAERCPAIERATRGEVLCEELRP 65 ++A G S +A LLG+ P SV++W +P R I + T + ELRP Sbjct: 10 GLEKAIKKAGNASNLAALLGIKPMSVSRWKTRYNGAVPPGRVLPIFKITG--ITPHELRP 67 Query: 66 DI 67 DI Sbjct: 68 DI 69 >UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Escherichia coli RepID=C8UNK0_ECO1A Length = 100 Score = 57.1 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYL 72 VG A LGVS ++Q G + R IE AT G+V ELRP DW + Sbjct: 12 VGDAKKFAARLGVSSSYLSQMASGRTAISPTRALMIESATEGQVSRAELRPH-DWELI 68 >UniRef50_Q4FUH4 Putative uncharacterized protein n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FUH4_PSYA2 Length = 84 Score = 56.7 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + +A GGQ+ +A L+G +V QW+ + A I T + E Sbjct: 7 TPKQALAKAVKKAGGQTELANLIGTKQQNVWQWLNRDGKASARYVSKISEKTN--IPSYE 64 Query: 63 LRPDI 67 LRPDI Sbjct: 65 LRPDI 69 >UniRef50_B5XSM1 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B5XSM1_KLEP3 Length = 71 Score = 55.6 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + A V G + +A LGVS +V+QW K +P+ R + AT V ELRPD Sbjct: 3 ALDNAIRVAGSANKLASTLGVSGMAVSQW-KTKGIVPSSRVLQVFNATG--VTPHELRPD 59 Query: 67 I 67 + Sbjct: 60 L 60 >UniRef50_Q37907 Regulatory protein cro n=3 Tax=root RepID=RCRO_BPD3 Length = 73 Score = 55.2 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%) Query: 9 KQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDID 68 K+ A G Q A LGV +V+ W++G + + T G+ E+L P Sbjct: 6 KELVAHFGTQDETAAKLGVDQSTVSGWVRGKHGMSPVVAKRAQVLTDGKFKKEDLCPAFP 65 Query: 69 WSYLRRSA 76 W L A Sbjct: 66 WEVLSAVA 73 >UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=A7JSL2_PASHA Length = 66 Score = 54.8 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDW 69 G ++ A+ LG+S + Q G +PA IE T GEV ELRPD+ W Sbjct: 12 RGFKADFAKKLGISKSYLRQVETGYSPMPAYLAKKIEEVTNGEVAKSELRPDL-W 65 >UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEC1_METSD Length = 81 Score = 54.4 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 16 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 GG+ A+A L +S ++++W+K ++P ER +E ++ E+RPDI Sbjct: 21 GGRPALAAALDISEQAIHKWVK-SGRIPTERVRDVEELINFQITRYEMRPDI 71 >UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFB3_9BURK Length = 97 Score = 54.4 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYL 72 G +A +GVS ++Q G+ + ERC IE+AT G V +L+P +W L Sbjct: 12 RGTAKKLASSIGVSQSFLSQMASGLSPISQERCFLIEQATAGAVARWDLKPH-NWHKL 68 >UniRef50_D0ZSX1 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S RepID=D0ZSX1_SALT1 Length = 86 Score = 54.4 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKG-VRQLPAERCPAIERATRGEVLCEELRP 65 + +A G + +A LL VS +++ W +PA+R I AT V ELRP Sbjct: 9 AIDKAITRAGTATRLAELLEVSAMTISHWRNRYQGVVPADRVLPIYSATG--VTPHELRP 66 Query: 66 DI 67 D+ Sbjct: 67 DL 68 >UniRef50_A9YWX8 Putative Cro n=1 Tax=Burkholderia phage Bups phi1 RepID=A9YWX8_9CAUD Length = 103 Score = 53.7 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + + A G QSA+ARL+G P +++W+ + E C + A + + RP Sbjct: 10 ALQAAIQKAGSQSALARLIGKKQPHIHKWLHSPNAMRPENCVLVGNAVG--IPYRDFRPT 67 Query: 67 IDWSYL 72 DW + Sbjct: 68 -DWHLI 72 >UniRef50_C0AX08 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AX08_9ENTR Length = 77 Score = 53.7 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGV-SPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 M +ENY+ ++A +G SA++R+ G SP SV WIK ++PAER + V Sbjct: 1 MHQENYT-EKAIRTIGVPSAVSRMFGFNSPQSVFNWIK-NNKVPAERVIQLCELGGWVVS 58 Query: 60 CEELRPDI 67 +LRPD+ Sbjct: 59 PHQLRPDL 66 >UniRef50_C7LJH3 Phage related protein n=1 Tax=Brucella microti CCM 4915 RepID=C7LJH3_BRUMC Length = 192 Score = 53.7 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Query: 11 ACAVVGGQSAMARLLGVSP-PSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 A GG A+AR LG+ SV W +++PA+ IE T + C ELRPDI Sbjct: 127 AIQAAGGVVALARGLGIKHHQSVYGW----KKIPADYVLRIEALTG--IPCCELRPDI 178 >UniRef50_B8F4M6 Phage transcriptional regulatory protein/antirepressor Cro n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F4M6_HAEPS Length = 66 Score = 52.5 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 N +A + G + +A GVS +V+ W++G + A+ I AT G++ +E+ Sbjct: 2 NKVIDKAISECGSRDKLATACGVSVMTVSNWVRGFG-IKAKHIKLISDATNGKISVDEI 59 >UniRef50_B7KSY7 Putative chaperone n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KSY7_METC4 Length = 77 Score = 52.5 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 + + +A GG A+ +G+S +++QW + P R A+E A+ V EL Sbjct: 2 SDVALSRAIKEAGGPKALGDAIGISSQAISQW----TECPPRRVLAVEAASG--VSRHEL 55 Query: 64 RPDI 67 RPD+ Sbjct: 56 RPDL 59 >UniRef50_B1G5M8 Putative uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5M8_9BURK Length = 102 Score = 52.1 bits (123), Expect = 5e-06, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 7 SFKQACAVVGGQSAMARLLG----VSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + ++A + G + +AR + + ++ W +P + P + A G+V E Sbjct: 14 ALQKAIEICGSRRELARRISLFSPCTSGRIDMWFSRNTVVPIDAVPFVAAAVDGQVSVYE 73 Query: 63 LRPDI--DWSYLRR 74 L P+ W LR Sbjct: 74 LCPEYAEGWRVLRA 87 >UniRef50_C3X1S2 Predicted protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X1S2_OXAFO Length = 90 Score = 51.7 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 F +A + GG + ++R + + Q +G +LP I AT G V +++ P Sbjct: 3 EEFNKAIQICGGLTKLSRAIDMPVSFAWQIKEGKSRLPEGYGRRIFDATHGAVSLKKMFP 62 Query: 66 DIDW 69 D W Sbjct: 63 D-SW 65 >UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acinetobacter RepID=C6RL40_ACIRA Length = 82 Score = 51.7 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%) Query: 20 AMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCS 79 A+ S +NQ + G + A I++ + G V C+ L P+ D++Y+R A + Sbjct: 23 DFAKRCQTSLGYLNQIMYGNSKCSASLAIKIDKESDGAVSCDLLCPEADFNYVRNQALIA 82 >UniRef50_UPI00016AD132 hypothetical protein Bpse38_34097 n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AD132 Length = 84 Score = 51.7 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + +A G QSA+ARL+G P +++W+ + E C + A + + RP Sbjct: 10 ALLRAIEKAGSQSALARLIGKKQPHIHKWLHSPNAMRPENCVLVGAAVG--IPYRDFRP- 66 Query: 67 IDWSYL 72 DW + Sbjct: 67 YDWKLI 72 >UniRef50_B7KYS5 Putative uncharacterized protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KYS5_METC4 Length = 82 Score = 51.3 bits (121), Expect = 9e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 + A ++G ++ + GV+ ++ + K ++ E IE+ATR + LRP Sbjct: 5 SLIQAAITLLGSEAKLGAACGVTQGAIWK-AKTAGRVSGELAVKIEKATRCAIPRWRLRP 63 Query: 66 DI 67 D+ Sbjct: 64 DL 65 >UniRef50_D0FT83 Lambda repressor-like protein n=1 Tax=Erwinia pyrifoliae RepID=D0FT83_ERWPY Length = 74 Score = 51.3 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 N ++A +VG Q +A+ +GV+ +V++W+ G + ++ A+ AT G V EE+ Sbjct: 2 NIVIQKAIDIVGSQRELAQKVGVNQSAVSKWLCGGG-IRSKYITALVIATNGTVTFEEI 59 >UniRef50_Q93E25 LygE n=1 Tax=Salmonella enterica subsp. enterica serovar Enteritidis RepID=Q93E25_SALEN Length = 118 Score = 50.6 bits (119), Expect = 1e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + Y K QS +A L G S ++ G QL E+ I AT EV Sbjct: 1 MTLDEYLKKNRVR----QSCLATLAGCSQSMISLVTTGRSQLSPEKVLRIAEATNFEVTP 56 Query: 61 EELRPD 66 ELRPD Sbjct: 57 HELRPD 62 >UniRef50_D2TX41 Phage regulatory protein n=1 Tax=Arsenophonus nasoniae RepID=D2TX41_9ENTR Length = 96 Score = 49.4 bits (116), Expect = 3e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 K + QS + R LG P +++ W + ++PAE ++ + ++ ELRPDI Sbjct: 23 LKNKIFAITTQSELGRKLGKRPQTISVWFR--NRVPAECVFSMAKVLEWQITPHELRPDI 80 >UniRef50_C8U3E2 Predicted antirepressor protein Cro n=1 Tax=Escherichia coli O103:H2 str. 12009 RepID=C8U3E2_ECO10 Length = 90 Score = 49.4 bits (116), Expect = 3e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q+A+AR LGV+P +VNQW +PA + +V LRPD+ Sbjct: 15 QNAIARNLGVTPQAVNQWFS-KNTIPARFVLRVCEVVAWKVTPHGLRPDL 63 >UniRef50_UPI0001B52E27 hypothetical protein ShiD9_12110 n=1 Tax=Shigella sp. D9 RepID=UPI0001B52E27 Length = 87 Score = 49.4 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGV-SPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 M +NY+ ++A G S +AR G S SV W+ Q+P+ER + V Sbjct: 1 MSSQNYT-EKAVKAAGKSLSEVARRFGFKSTQSVANWV-INNQVPSERVLQLCELGNWSV 58 Query: 59 LCEELRPDI 67 ELRPDI Sbjct: 59 TPHELRPDI 67 >UniRef50_Q6J1N2 Gp45 n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N2_9CAUD Length = 72 Score = 49.0 bits (115), Expect = 4e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 K A GG + +A G+S S+ +WI ++P +R + R T + +L P Sbjct: 2 SLIKDAVTEAGGATVVATAFGISRISIYEWID-KGRVPEKRVLPLARLTNWKFTPHQLAP 60 >UniRef50_B1J5K2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida W619 RepID=B1J5K2_PSEPW Length = 103 Score = 49.0 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 +++ GGQ A L V+ +V+ W++G + AE +R T G ELRP Sbjct: 7 EIYQRLVEHFGGQDLTAAALKVNQSTVSGWVRGKHAMSAETAFLAQRKTCGAFSAIELRP 66 Query: 66 DI 67 + Sbjct: 67 SL 68 >UniRef50_C8U3V4 Predicted antirepressor protein Cro n=19 Tax=Enterobacteriaceae RepID=C8U3V4_ECO10 Length = 90 Score = 48.3 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 S ++ Q+ + R +GV+ +V QW +P ++ + + + EV E+RP Sbjct: 3 DSTREKIRQKYTQAEIGRYMGVAQQTVWQWFSFG--VPPKQVIPLCQLMKWEVTPHEIRP 60 Query: 66 DI 67 DI Sbjct: 61 DI 62 >UniRef50_C5CJM5 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CJM5_VARPS Length = 81 Score = 47.9 bits (112), Expect = 9e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 9 KQACAVVG-GQSAMARLLGVS-PPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 ++ + G + +AR+LG +V W G+ P C +E +G++ +ELRP Sbjct: 8 RKVLKLAGNSHAEVARILGYEDRRNVWPWTNGLNPFPPYHCRTLEDHFKGQITRKELRPH 67 Query: 67 IDW 69 DW Sbjct: 68 -DW 69 >UniRef50_C7BGF8 Putative uncharacterized protein n=2 Tax=root RepID=C7BGF8_9CAUD Length = 79 Score = 47.5 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR-----PDIDW 69 G +A +G ++ W R +P IER T G+V +L PDI W Sbjct: 11 RGRLVKLAAAIGAHASDLSAWANKKRPVPIPFGWPIERETDGQVRRVDLFSADVIPDI-W 69 Query: 70 SYL 72 L Sbjct: 70 PEL 72 >UniRef50_C8UC34 Predicted antirepressor protein Cro n=2 Tax=Escherichia coli RepID=C8UC34_ECO1A Length = 85 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q+A+AR +GV+P +VN W +P+ + +V LRPD+ Sbjct: 16 QNAIARYIGVTPQAVNLWFS-KNSVPSRFVLRVCELVEWKVTPHGLRPDL 64 >UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB6_AERS4 Length = 62 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 9 KQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + A + G + +AR L +S P+V++W +P R IE T G++ ++ Sbjct: 4 EDAISYFGSAAELARNLNISEPAVSRWGDI---IPKGRAYQIEVLTGGKLKADQ 54 >UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, prophage-related n=9 Tax=Gammaproteobacteria RepID=Q2SPC5_HAHCH Length = 64 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 A A GG+S +A LGV+P SV+Q LP R +ER T G++ Sbjct: 5 DAVAYFGGKSKLANALGVAPASVSQ---RGEFLPMLRAYQVERMTGGKLR 51 >UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID=B7UQF7_ECO27 Length = 93 Score = 45.9 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYL 72 Q A G S + + + + L A C IERA+ GEV ++LRP DW + Sbjct: 16 QRMFACECGTSIGYLRKALSKGQVLGASLCVLIERASNGEVTRQQLRP-FDWMNI 69 >UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX Length = 91 Score = 45.6 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M +Y ++ Q +L G+S V++ + G + E+ + T EV Sbjct: 1 MNLRDYLKEKHIT----QLQFGKLTGLSQVHVSRVLGGYERFSPEKALRVAEVTNFEVTP 56 Query: 61 EELRPDI 67 ELRPDI Sbjct: 57 HELRPDI 63 >UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria RepID=C6M779_NEISI Length = 61 Score = 45.2 bits (105), Expect = 6e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 G +SA A+ L VSP +V QW +P ++ IE+ T G++ Sbjct: 5 DVLKFFGSKSATAQHLDVSPSAVTQWKDI---IPEKQAYRIEKITNGKLK 51 >UniRef50_B0VKG4 Putative uncharacterized protein n=3 Tax=Acinetobacter RepID=B0VKG4_ACIBS Length = 83 Score = 45.2 bits (105), Expect = 6e-04, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%) Query: 12 CAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCP--AIERATRGEVLCEELRPD--I 67 +GG +A+ARLLG++PPSV+ W + +P ++ A+ G +EL PD Sbjct: 7 IDKLGGVTAVARLLGITPPSVSGW----KAIPLDKKIRLAVIAEDLGLTTRKELFPDNYQ 62 Query: 68 D-WSYLRRSACCSQN 81 D W LR S+N Sbjct: 63 DIWIELRPQTTKSKN 77 >UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q083R5_SHEFN Length = 61 Score = 45.2 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 A GGQ +A++L VS P++++W +P R I+ T G++ Sbjct: 5 DVIAHFGGQGRLAKVLDVSQPAISKW---GDTVPLLRAYQIQVITNGKLK 51 >UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax=Gammaproteobacteria RepID=Q88MM1_PSEPK Length = 58 Score = 44.8 bits (104), Expect = 8e-04, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 QA G SA+A+ LGV+ +V QW +P R IER T+G + Sbjct: 5 QAIQHFGSISALAKALGVTYEAVRQWAD----VPELRQYQIERLTKGALKA 51 >UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1TVQ0_ACIAC Length = 84 Score = 44.8 bits (104), Expect = 8e-04, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Query: 28 SPPSVNQWIKG-VRQLP-AERCPAIERATRGEVLCEELRPDIDWSYL 72 S + QW G R++P C AIE+AT G+V ++LRP DW+ + Sbjct: 31 SDAQIRQWQHGYARRIPSPLNCVAIEQATGGQVTRKDLRPH-DWAAI 76 >UniRef50_A7C750 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C750_9GAMM Length = 110 Score = 44.4 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 15/83 (18%) Query: 3 KENYSFKQACAVVG--GQSAMARLLGVSPPSVNQWIKGVRQLPAERCP---------AIE 51 KEN K+ + +G Q A +GVSP +VN+W +G ++P E IE Sbjct: 2 KENIDLKREISELGFESQKKFAEFMGVSPRTVNRWCRGFSKVPREVVSLCTTLREKQRIE 61 Query: 52 RATRGEVLCEELR-PD---IDWS 70 R + V R PD ++W Sbjct: 62 REVKKIVEEGYSRLPDGRMVNWH 84 >UniRef50_Q2P3J1 Phage-related protein n=1 Tax=Xanthomonas oryzae pv. oryzae MAFF 311018 RepID=Q2P3J1_XANOM Length = 140 Score = 44.0 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%) Query: 13 AVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 ++ G +A +G+S +++QW G + +P ER + R Sbjct: 14 SLRGSLRGLAEQMGISSGALSQWKLGNKPIPDERIQQLARIAG 56 >UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A7FIY8_YERP3 Length = 68 Score = 44.0 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 16/84 (19%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKK K GG A LG+ P+V +W +P ++ IER T G Sbjct: 1 MKK-----KDVVKFFGGVVNTAIALGIKHPAVCRW---GEIIPEKQAMRIERITHG---- 48 Query: 61 EELRPDIDWSYLRRSACCSQNMSV 84 ELR D + +S+ N + Sbjct: 49 -ELRYD---PAMYQSSLIKINTQI 68 >UniRef50_P14816 Gene 30 protein n=2 Tax=root RepID=VG30_BPPH8 Length = 73 Score = 43.6 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 2 KKENYS--FKQACAVVGG-QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 KK N S ++A VGG Q +A +GV+P ++N K LP + E T + Sbjct: 4 KKSNASTPLEKAINAVGGSQKVLAEKVGVTPQAINMLKKRGGSLPVTKMRKYEEVTG--L 61 Query: 59 LCEELRPDI 67 E L P I Sbjct: 62 PREVLYPGI 70 >UniRef50_A9BV81 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BV81_DELAS Length = 99 Score = 43.6 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 15/35 (42%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVR 40 +A A G Q +A +GV V+ W G R Sbjct: 5 ELIDKAVAAAGSQVKLAEKMGVKQQEVSSWRTGKR 39 >UniRef50_C4TVB5 Gp45 n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TVB5_YERKR Length = 82 Score = 43.6 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 9 KQACAVVGGQSAMARLLGV-SPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +A VG S ++R S SV WI Q+PA+R + + EV ELRPDI Sbjct: 10 DRAIRAVGSLSRVSRAFEFKSVQSVANWI-INNQVPADRVIQLCAMGKWEVTPHELRPDI 68 >UniRef50_C4U3C1 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U3C1_YERKR Length = 72 Score = 43.3 bits (100), Expect = 0.002, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 2 KKENYSFKQACAVVGG-QSAMARLLGVSPPSVNQWI-KGVRQLPAERCPAIERATRGEVL 59 + ++A VGG Q +A+ LGVS ++ +G LP +R R T + Sbjct: 3 ETPMTPLEKAVQAVGGKQKTLAQRLGVSEQAITLMKQRGKGYLPRKRIEDFVRVTG--LK 60 Query: 60 CEELRPDI 67 E+L PD+ Sbjct: 61 KEDLYPDV 68 >UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID=YMFT_ECOLI Length = 66 Score = 43.3 bits (100), Expect = 0.002, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q +A +G +P + G ++ +E+ T G + +LRPDI Sbjct: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 >UniRef50_C6XEC2 Putative phage repressor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEC2_METSD Length = 226 Score = 42.9 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR--GE 57 M + K+A G Q+ +A GVS +V++WI G Q+ E I + G Sbjct: 1 MNEVGKLIKEALEHQGKTQAWLAEFCGVSNNAVSKWINGSGQISRE---NIRKVANALGL 57 Query: 58 VLCEELRPDID 68 E L D D Sbjct: 58 RASELLNTDTD 68 >UniRef50_A1W3Z6 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1W3Z6_ACISJ Length = 97 Score = 42.1 bits (97), Expect = 0.005, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPA 44 M + N+ ++A ++ G + +A++LG+ P++ W G R A Sbjct: 4 MSQLNFLIEKAASIAGSEYKLAQMLGMQQPTITAWKTGKRPCSA 47 >UniRef50_B1M2M6 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2M6_METRJ Length = 84 Score = 42.1 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%) Query: 19 SAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + A ++G + +V +++ G R+ ++ IER T G V + Sbjct: 19 TEFAAMIGATQAAVTRYVNGRRKPSLDKLILIERVTEGAVRALD 62 >UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_BPP22 Length = 61 Score = 42.1 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 9 KQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 K G Q A+A+ LG+S +V+QW +P + +E T G + +E Sbjct: 4 KDVIDHFGTQRAVAKALGISDAAVSQW---KEVIPEKDAYRLEIVTAGALKYQE 54 >UniRef50_B8IIS9 Putative plasmid maintenance system antidote protein, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IIS9_METNO Length = 81 Score = 41.7 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 7 SFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + +Q G S +A +G + ++++ ++G R + + +ER T G V ++ Sbjct: 3 ALEQYFEETGDNVSKLAERMGRAATTISRPLRGERNVSLDIALDVERVTGGRVTADQ 59 >UniRef50_B8INW8 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8INW8_METNO Length = 79 Score = 41.7 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK Y + S A +GV+ ++ ++ G R+ + I RAT G+V Sbjct: 1 MKLAAYLADREIK----DSDFAARIGVTRQTLWRYKSGERRPEWDVLERISRATDGQVTP 56 Query: 61 EELRPDID 68 + D Sbjct: 57 NDFLSDAP 64 >UniRef50_D2UAK5 Hypothetical phage-related protein n=2 Tax=Xanthomonas albilineans RepID=D2UAK5_XANAL Length = 275 Score = 40.6 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 13 AVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 ++ G +A +G+S ++QW G + +P ER + + Sbjct: 14 SLRGSLRGLAEQMGISSGVLSQWKLGNKPIPDERIQQLAKIAG 56 >UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QPX1_9RHOB Length = 74 Score = 39.8 bits (91), Expect = 0.029, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCE 61 Q+ A +GVS +++ G + + IERAT G V Sbjct: 15 QADFAEQVGVSQGVISRLANGASKPGLDLAVRIERATAGSVSAS 58 >UniRef50_Q1DAJ1 Putative transposase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAJ1_MYXXD Length = 183 Score = 39.0 bits (89), Expect = 0.041, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 26/40 (65%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRG 56 ++A+AR +GVS P+++QW++ R++ A P E+ G Sbjct: 22 SEAALARQVGVSQPTLSQWLREARRVAAMTPPPEEKKPAG 61 >UniRef50_A3IX74 Zinc finger protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IX74_9CHRO Length = 461 Score = 37.9 bits (86), Expect = 0.099, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 16/35 (45%) Query: 16 GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAI 50 G +A+AR L + +V W KG Q E I Sbjct: 264 GNIAALARYLKMRKNTVWLWCKGKNQPSLEALLRI 298 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=... 148 5e-35 UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli ... 141 5e-33 UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH... 107 9e-23 UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemoph... 100 1e-20 UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella... 100 2e-20 UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisser... 99 5e-20 UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_A... 97 1e-19 UniRef50_A4JD18 Putative uncharacterized protein n=1 Tax=Burkhol... 96 3e-19 UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovo... 94 2e-18 UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax... 94 2e-18 UniRef50_C4K7L6 Phage transcriptional regulatory protein n=1 Tax... 92 4e-18 UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovo... 92 4e-18 UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator ... 92 7e-18 UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax... 90 2e-17 UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkhol... 89 5e-17 UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Provide... 87 2e-16 UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobac... 87 2e-16 UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovo... 86 3e-16 UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Ars... 85 5e-16 UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=... 85 8e-16 UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS ... 85 8e-16 UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudom... 83 2e-15 UniRef50_B7LNE3 Represror Cro n=6 Tax=Escherichia RepID=B7LNE3_E... 83 2e-15 UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptosp... 83 3e-15 UniRef50_B7LB93 Cro n=22 Tax=root RepID=B7LB93_ECO55 82 4e-15 UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteob... 82 5e-15 UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella... 80 2e-14 UniRef50_B4YK26 Putative uncharacterized protein n=1 Tax=Tetrath... 80 2e-14 UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingell... 80 3e-14 UniRef50_C5A7V7 Putative uncharacterized protein n=1 Tax=Burkhol... 78 6e-14 UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoa... 78 6e-14 UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudom... 78 7e-14 UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella Re... 77 2e-13 UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteob... 77 3e-13 UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Esch... 76 3e-13 UniRef50_D2U112 Phage regulatory protein n=1 Tax=Arsenophonus na... 75 6e-13 UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylo... 75 6e-13 UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro f... 75 6e-13 UniRef50_B4SNJ4 CI repressor n=1 Tax=Stenotrophomonas maltophili... 75 7e-13 UniRef50_A7MHP9 Putative uncharacterized protein n=1 Tax=Cronoba... 75 8e-13 UniRef50_A9N3H0 Putative uncharacterized protein n=3 Tax=Enterob... 74 1e-12 UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q... 74 1e-12 UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkhol... 74 2e-12 UniRef50_C6AM32 Antirepressor Cro n=5 Tax=root RepID=C6AM32_AGGAN 73 2e-12 UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickett... 73 4e-12 UniRef50_A9YWX8 Putative Cro n=1 Tax=Burkholderia phage Bups phi... 72 4e-12 UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro f... 72 7e-12 UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella... 72 7e-12 UniRef50_B5XSM1 Putative uncharacterized protein n=2 Tax=Enterob... 72 8e-12 UniRef50_Q37907 Regulatory protein cro n=3 Tax=root RepID=RCRO_BPD3 71 9e-12 UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkhol... 71 1e-11 UniRef50_B7LJJ9 Putative uncharacterized protein n=1 Tax=Escheri... 71 1e-11 UniRef50_C0AX08 Putative uncharacterized protein n=1 Tax=Proteus... 71 1e-11 UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepI... 70 2e-11 UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteur... 70 2e-11 UniRef50_D0ZSX1 Putative uncharacterized protein n=1 Tax=Salmone... 70 2e-11 UniRef50_Q93E25 LygE n=1 Tax=Salmonella enterica subsp. enterica... 70 2e-11 UniRef50_UPI00016AD132 hypothetical protein Bpse38_34097 n=1 Tax... 69 4e-11 UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX 69 5e-11 UniRef50_Q4FUH4 Putative uncharacterized protein n=1 Tax=Psychro... 69 5e-11 UniRef50_A5UGL7 Putative uncharacterized protein n=5 Tax=Pasteur... 69 5e-11 UniRef50_UPI0001B52E27 hypothetical protein ShiD9_12110 n=1 Tax=... 67 1e-10 UniRef50_C8U3V4 Predicted antirepressor protein Cro n=19 Tax=Ent... 67 1e-10 UniRef50_B7KSY7 Putative chaperone n=1 Tax=Methylobacterium chlo... 67 2e-10 UniRef50_B8F4M6 Phage transcriptional regulatory protein/antirep... 67 2e-10 UniRef50_A6WVE7 Putative uncharacterized protein n=1 Tax=Ochroba... 66 3e-10 UniRef50_D1NX87 Cytoplasmic chaperone TorD n=1 Tax=Providencia r... 66 3e-10 UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemoph... 66 4e-10 UniRef50_D2TX41 Phage regulatory protein n=1 Tax=Arsenophonus na... 66 4e-10 UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID... 65 5e-10 UniRef50_B7KYS5 Putative uncharacterized protein n=1 Tax=Methylo... 65 8e-10 UniRef50_D0FT83 Lambda repressor-like protein n=1 Tax=Erwinia py... 65 9e-10 UniRef50_B1G5M8 Putative uncharacterized protein n=1 Tax=Burkhol... 64 1e-09 UniRef50_C3X1S2 Predicted protein n=1 Tax=Oxalobacter formigenes... 64 1e-09 UniRef50_Q6J1N2 Gp45 n=1 Tax=Burkholderia phage BcepC6B RepID=Q6... 64 1e-09 UniRef50_C8U3E2 Predicted antirepressor protein Cro n=1 Tax=Esch... 64 1e-09 UniRef50_C7LJH3 Phage related protein n=1 Tax=Brucella microti C... 63 2e-09 UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp... 63 3e-09 UniRef50_C5CJM5 Putative uncharacterized protein n=1 Tax=Variovo... 62 4e-09 UniRef50_B1J5K2 Putative uncharacterized protein n=1 Tax=Pseudom... 62 6e-09 UniRef50_C8UC34 Predicted antirepressor protein Cro n=2 Tax=Esch... 62 7e-09 UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acineto... 62 9e-09 UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovo... 57 1e-07 UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterob... 57 2e-07 UniRef50_C7BGF8 Putative uncharacterized protein n=2 Tax=root Re... 56 4e-07 UniRef50_A7C750 Putative uncharacterized protein n=1 Tax=Beggiat... 56 4e-07 UniRef50_B0VKG4 Putative uncharacterized protein n=3 Tax=Acineto... 54 1e-06 UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protei... 54 2e-06 UniRef50_P14816 Gene 30 protein n=2 Tax=root RepID=VG30_BPPH8 53 3e-06 UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax... 53 3e-06 UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigi... 52 4e-06 UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria ... 51 1e-05 UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, p... 50 2e-05 UniRef50_A9BV81 Putative uncharacterized protein n=1 Tax=Delftia... 48 6e-05 UniRef50_Q2P3J1 Phage-related protein n=1 Tax=Xanthomonas oryzae... 48 8e-05 Sequences not found previously or not previously below threshold: UniRef50_C4TVB5 Gp45 n=1 Tax=Yersinia kristensenii ATCC 33638 Re... 58 8e-08 UniRef50_D2U4K7 Phage transcriptional regulator n=1 Tax=Arsenoph... 57 1e-07 UniRef50_B0QXI3 Putative uncharacterized protein n=1 Tax=Haemoph... 54 2e-06 UniRef50_B4EFR1 Hypothetical phage protein n=1 Tax=Burkholderia ... 52 5e-06 UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_... 52 5e-06 UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptosp... 52 6e-06 UniRef50_C8U7L5 Predicted transcriptional regulator n=3 Tax=Ente... 51 1e-05 UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax... 50 2e-05 UniRef50_C4U3C1 Putative uncharacterized protein n=1 Tax=Yersini... 50 3e-05 UniRef50_B1WN54 Transcriptional regulator, Cro/CI family-related... 50 3e-05 UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID... 49 4e-05 UniRef50_C0AW02 Putative uncharacterized protein n=1 Tax=Proteus... 49 5e-05 UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptosp... 49 6e-05 UniRef50_Q2W5Y9 Putative uncharacterized protein n=1 Tax=Magneto... 48 7e-05 UniRef50_C6XEC2 Putative phage repressor n=1 Tax=Methylovorus sp... 48 7e-05 UniRef50_Q7ME19 Putative uncharacterized protein VVA0865 n=1 Tax... 48 7e-05 UniRef50_C4SVT1 Putative uncharacterized protein n=2 Tax=Enterob... 48 1e-04 UniRef50_D0ZTD1 Putative uncharacterized protein n=1 Tax=Salmone... 47 2e-04 UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella... 47 2e-04 UniRef50_B2I5H4 Putative uncharacterized protein n=1 Tax=Xylella... 47 3e-04 UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeri... 47 3e-04 UniRef50_A1W3Z6 Putative uncharacterized protein n=2 Tax=Acidovo... 46 3e-04 UniRef50_B8INW8 Transcriptional regulator, XRE family n=1 Tax=Me... 46 4e-04 UniRef50_B0N104 Putative uncharacterized protein n=2 Tax=Bacteri... 46 4e-04 UniRef50_D2U1N3 Phage transcriptional regulator n=1 Tax=Arsenoph... 46 4e-04 UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia py... 46 4e-04 UniRef50_D2UAK5 Hypothetical phage-related protein n=2 Tax=Xanth... 45 5e-04 UniRef50_A5CUZ3 Putative plasmid maintenance system, antidote pr... 45 6e-04 UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Ars... 45 7e-04 UniRef50_B3G2I3 Putative uncharacterized protein n=1 Tax=Pseudom... 45 7e-04 UniRef50_Q8W6G8 Putative uncharacterized protein orf59 n=1 Tax=S... 45 9e-04 UniRef50_D2C499 Transcriptional regulator, XRE family n=7 Tax=Th... 45 9e-04 UniRef50_D0TRF9 HigA family addiction module antidote protein n=... 45 0.001 UniRef50_B1VF05 Putative transcriptional regulator (HTH_3 family... 45 0.001 UniRef50_C7RCB9 Transcriptional regulator, XRE family n=1 Tax=Ka... 45 0.001 UniRef50_B9JNX2 Adenylate/guanylate cyclase protein n=3 Tax=Rhiz... 44 0.001 UniRef50_Q79RI9 HTH-type transcriptional regulator for conjugati... 44 0.001 UniRef50_Q1LA95 Transcriptional regulator, XRE family n=1 Tax=Cu... 44 0.002 UniRef50_B1M2M6 Transcriptional regulator, XRE family n=1 Tax=Me... 44 0.002 UniRef50_C5CH39 Transcriptional regulator, XRE family n=1 Tax=Ko... 44 0.002 UniRef50_B7J7H3 Transcriptional regulator, putative n=1 Tax=Acid... 44 0.002 UniRef50_Q728H0 Transcriptional regulator, putative n=4 Tax=Desu... 43 0.002 UniRef50_B9P4Q9 Predicted protein n=1 Tax=Populus trichocarpa Re... 43 0.002 UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostri... 43 0.003 UniRef50_C6SQ36 Plasmid maintenance system antidote protein n=1 ... 43 0.003 UniRef50_B2HWL5 Putative uncharacterized protein n=1 Tax=Acineto... 43 0.003 UniRef50_D2U1D7 Conserved hypothetical phage protein n=1 Tax=Ars... 43 0.003 UniRef50_A8V1Y7 Putative uncharacterized protein (Fragment) n=1 ... 43 0.004 UniRef50_C7QJ41 Transcriptional regulator, XRE family n=1 Tax=Ca... 43 0.004 UniRef50_C8Q8I4 Putative phage repressor n=1 Tax=Pantoea sp. At-... 43 0.004 UniRef50_B8IIS9 Putative plasmid maintenance system antidote pro... 43 0.004 UniRef50_B4ESL6 Putative phage regulatory protein n=2 Tax=Entero... 43 0.004 UniRef50_D2MG99 Helix-turn-helix domain protein n=1 Tax=Rhodopse... 43 0.004 UniRef50_Q03UG5 Transcriptional regulator, xre family n=2 Tax=Le... 43 0.004 UniRef50_B7S386 Putative uncharacterized protein n=1 Tax=marine ... 42 0.005 UniRef50_Q48LS2 Repressor protein c2, putative n=8 Tax=Gammaprot... 42 0.005 UniRef50_B0G1D1 Putative uncharacterized protein n=1 Tax=Dorea f... 42 0.006 UniRef50_C9ZE23 Putative LysR-family transcriptional regulator n... 42 0.006 UniRef50_A8U7M3 Dynamin n=1 Tax=Carnobacterium sp. AT7 RepID=A8U... 42 0.006 UniRef50_Q60C36 DNA-binding protein n=3 Tax=Bacteria RepID=Q60C3... 42 0.006 UniRef50_C0FVH9 Putative uncharacterized protein n=1 Tax=Rosebur... 42 0.006 UniRef50_Q7D1G4 Putative uncharacterized protein n=1 Tax=Agrobac... 42 0.006 UniRef50_A4W7L5 Regulator protein, putative n=1 Tax=Enterobacter... 42 0.006 UniRef50_B0V853 Putative uncharacterized protein n=1 Tax=Acineto... 42 0.006 UniRef50_Q8F1A5 Predicted transcriptional regulator n=2 Tax=Lept... 42 0.007 UniRef50_D2RAC0 DNA-binding protein n=2 Tax=Actinobacteria (clas... 42 0.007 UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Esche... 42 0.007 UniRef50_A6STU3 Prophage Pfl 6 Cro repressor n=2 Tax=Pseudomonas... 42 0.007 UniRef50_Q141U8 Putative uncharacterized protein n=2 Tax=Proteob... 42 0.007 UniRef50_Q2G3X4 Putative uncharacterized protein n=1 Tax=Novosph... 42 0.007 UniRef50_Q2P3H3 18.2K protein n=1 Tax=Xanthomonas oryzae pv. ory... 42 0.007 UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n... 42 0.007 UniRef50_B7ML20 Putative uncharacterized protein n=13 Tax=Escher... 42 0.007 UniRef50_C6LAS4 Transcriptional regulator n=1 Tax=Bryantella for... 42 0.008 UniRef50_C7CEU7 Putative plasmid maintenance system antidote pro... 42 0.009 UniRef50_Q5WH75 Transcriptional regulator n=2 Tax=Bacillus RepID... 41 0.010 UniRef50_D1SQQ5 Transcriptional regulator, LysR family n=1 Tax=A... 41 0.011 UniRef50_B4DA78 Putative phage repressor n=1 Tax=Chthoniobacter ... 41 0.013 UniRef50_C1YIC5 Helix-turn-helix protein n=1 Tax=Nocardiopsis da... 41 0.013 UniRef50_C9L320 Toxin-antitoxin system, antitoxin component, Xre... 41 0.013 UniRef50_Q4K5P6 Proteic killer suppressor protein n=9 Tax=Proteo... 41 0.013 UniRef50_C9Z9U9 Putative DNA-binding protein n=1 Tax=Streptomyce... 41 0.014 UniRef50_Q136G0 Transcriptional regulators n=3 Tax=Rhodopseudomo... 41 0.015 UniRef50_A8ZP63 Putative uncharacterized protein n=1 Tax=Acaryoc... 41 0.015 UniRef50_B4VL76 Helix-turn-helix domain protein n=8 Tax=Cyanobac... 41 0.015 UniRef50_Q5FN49 Putative uncharacterized protein n=1 Tax=Glucono... 41 0.015 UniRef50_Q1CP28 Transcriptional regulator, Cro/CI family n=8 Tax... 41 0.015 UniRef50_C7N3C8 Helix-turn-helix protein n=2 Tax=Slackia heliotr... 40 0.017 UniRef50_D0FW95 Putative prophage regulatory ptotein n=2 Tax=Erw... 40 0.017 UniRef50_A5CEV6 Putative transcriptional regulator n=2 Tax=Orien... 40 0.017 UniRef50_D1Q0N7 Helix-turn-helix domain protein n=4 Tax=Prevotel... 40 0.018 UniRef50_D1DBX2 Transcriptional regulator n=3 Tax=Neisseria gono... 40 0.018 UniRef50_B2HL42 Plasmid maintenance system antidote protein n=1 ... 40 0.018 UniRef50_A4JWA5 Putative uncharacterized protein n=1 Tax=Burkhol... 40 0.019 UniRef50_P06965 Repressor protein of division inhibition gene di... 40 0.019 UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio ... 40 0.019 UniRef50_Q03N54 Transcriptional regulator, xre family n=15 Tax=L... 40 0.020 UniRef50_C7MVX6 Helix-turn-helix protein n=1 Tax=Saccharomonospo... 40 0.023 UniRef50_A8ZLR5 Plasmid maintenance system antidote system, puta... 40 0.025 UniRef50_A7MHM9 Putative uncharacterized protein n=3 Tax=Enterob... 40 0.025 UniRef50_C8T869 Putative uncharacterized protein n=1 Tax=Klebsie... 40 0.026 UniRef50_Q5FNI8 Putative phage protein n=1 Tax=Gluconobacter oxy... 40 0.026 UniRef50_B4RFH0 Transcriptional regulator, XRE family n=1 Tax=Ph... 40 0.028 UniRef50_B9BHR2 Conserved domain protein n=2 Tax=Burkholderia mu... 40 0.031 UniRef50_UPI0001B4BA50 hypothetical protein ShygA5_38643 n=1 Tax... 40 0.032 UniRef50_C5B1U8 Putative uncharacterized protein n=5 Tax=Alphapr... 39 0.036 UniRef50_C9LCK9 Toxin-antitoxin system, antitoxin component, Xre... 39 0.037 UniRef50_D0KXR0 Plasmid maintenance system antidote protein, XRE... 39 0.039 UniRef50_C6P0T2 Plasmid maintenance system antidote protein, XRE... 39 0.041 UniRef50_B3EPS4 Plasmid maintenance system antidote protein, XRE... 39 0.049 UniRef50_A6NW39 Putative uncharacterized protein n=1 Tax=Bactero... 39 0.050 UniRef50_C5CJM0 Transcriptional regulator, XRE family n=1 Tax=Va... 39 0.058 UniRef50_D2MJ41 Plasmid maintenance system antidote protein, XRE... 39 0.059 UniRef50_Q9PG03 Putative uncharacterized protein n=1 Tax=Xylella... 38 0.085 UniRef50_A1KC49 Putative uncharacterized protein n=1 Tax=Azoarcu... 38 0.091 >UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=YDAS_ECOLI Length = 98 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 98/98 (100%), Positives = 98/98 (100%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC Sbjct: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 Query: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT Sbjct: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 >UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli RepID=C8U5T9_ECO10 Length = 114 Score = 141 bits (356), Expect = 5e-33, Method: Composition-based stats. Identities = 83/98 (84%), Positives = 90/98 (91%), Gaps = 4/98 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKK+NYSFK+ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERAT+G VLC Sbjct: 8 MKKDNYSFKRACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATKGGVLC 67 Query: 61 EELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT 98 EELRPD+DW+YLRRS+C SQNMS+KQ ND N DHT Sbjct: 68 EELRPDVDWTYLRRSSCYSQNMSMKQPNDEN----DHT 101 >UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH8_PROMH Length = 79 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 45/69 (65%), Positives = 55/69 (79%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + K+AC VGGQS MA+ LG+SPP+VNQWI G R++PA RCP IE+ T G V CEELRPD Sbjct: 9 AIKKACNYVGGQSEMAKRLGISPPTVNQWINGTRKIPARRCPEIEKVTSGVVRCEELRPD 68 Query: 67 IDWSYLRRS 75 +DWSYLR + Sbjct: 69 VDWSYLRGT 77 >UniRef50_C9MCU9 Putative uncharacterized protein n=1 Tax=Haemophilus influenzae NT127 RepID=C9MCU9_HAEIN Length = 81 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + +A + G QSA+AR GVS P+VN W+ G ++ + P+I +AT+ EV Sbjct: 1 MSSMSEYVNKAIEICGSQSALARACGVSQPTVNLWLNG-GKMDVKYIPSIIQATKFEVNP 59 Query: 61 EELRPDIDWSYLRRSA 76 ELRPD+DW + S Sbjct: 60 TELRPDVDWPTIYESL 75 >UniRef50_Q3R7Y7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R7Y7_XYLFA Length = 101 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 38/73 (52%), Positives = 45/73 (61%) Query: 13 AVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYL 72 G S +AR+L VS +V WI G + +P ERCPAIERAT V CEELRPD+DW YL Sbjct: 9 QERGRASQLARMLSVSSTTVANWISGKKPIPPERCPAIERATVRAVTCEELRPDVDWEYL 68 Query: 73 RRSACCSQNMSVK 85 R +A Q S Sbjct: 69 RGTAAIDQAKSKS 81 >UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisseria gonorrhoeae RepID=C1HWP2_NEIGO Length = 78 Score = 98.9 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 S ++A G +S +AR +GV P+V W K P RC IE+ T G V ++LRPD Sbjct: 4 SIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPD 63 Query: 67 IDWSYLRRSACCSQNM 82 DW + Q Sbjct: 64 -DWHLIWPELAGDQPK 78 >UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_ACIBT Length = 82 Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + +F A G SA+AR +GV+P + ++W ++P +RC IE T+G+V Sbjct: 1 MTTPHEAFNNAVTFAGSISALARKIGVTPWAASKW--NPEKIPEDRCLKIEEITQGQVKA 58 Query: 61 EELRPDIDWSYLRRSACCSQNMSVK 85 E+LRPDI+W Y+R++ QN SV Sbjct: 59 EQLRPDINWEYVRKN-LKKQNQSVS 82 >UniRef50_A4JD18 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JD18_BURVG Length = 97 Score = 96.2 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 43/72 (59%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N S +A G SAMAR LG+S +V Q K ++PAE CP IER G V CE+L Sbjct: 22 NDSIDRAVKHFGSMSAMARHLGLSSYTVIQQWKIAGRVPAEHCPNIERLCGGVVRCEDLN 81 Query: 65 PDIDWSYLRRSA 76 +DW+++R SA Sbjct: 82 DRVDWAFVRASA 93 >UniRef50_A1TPM4 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPM4_ACIAC Length = 86 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 43/69 (62%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + ++A GG + +A L + +V W G RQLPAE CP +ER G V CE+LRPD Sbjct: 3 AIQRAIQGAGGPAKVAHELRCTVQAVCFWRDGKRQLPAEHCPVLERLNDGAVRCEDLRPD 62 Query: 67 IDWSYLRRS 75 +DW+Y+R S Sbjct: 63 VDWAYIRSS 71 >UniRef50_C4F662 Uncharacterized prophage-related protein n=5 Tax=Haemophilus influenzae RepID=C4F662_HAEIN Length = 78 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 41/71 (57%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 ++A + G Q ++A+ GVS +VN+W+ G + + P+I +AT+ EV ELRP Sbjct: 2 SGIERAVEICGKQKSLAKACGVSQQAVNKWVSGKNNMDVKYIPSIIQATKFEVNPTELRP 61 Query: 66 DIDWSYLRRSA 76 D+DW + S Sbjct: 62 DVDWPTIYESL 72 >UniRef50_C4K7L6 Phage transcriptional regulatory protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K7L6_HAMD5 Length = 152 Score = 92.4 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N + K+A +V GQ +A L GV P+V +W+ G + +I ++ GE+ EL Sbjct: 2 NKAIKKAIKIVRGQKKLADLCGVKQPTVWRWLHGGG-ITFRYLKSIVESSGGEIKPHELN 60 Query: 65 PDIDWSYLRRSACCSQNMSVKQLND 89 D + YL + SQ + D Sbjct: 61 KDFE-KYLFINMIFSQCRAKSNPKD 84 >UniRef50_C5T1S9 Putative uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1S9_ACIDE Length = 81 Score = 92.4 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 + QAC +G Q+ +A+ + V+P V+QW GVR +P + C AIERAT G V +LR Sbjct: 4 QQAIHQACEQLGSQAGLAKAIDVAPAIVHQWRSGVRPVPVQHCLAIERATNGAVSRRDLR 63 Query: 65 PDIDWSYLRRSACC 78 PD DW + Sbjct: 64 PD-DWHLIWPELAN 76 >UniRef50_A4NID4 Predicted DNA-binding transcriptional regulator n=2 Tax=Pasteurellaceae RepID=A4NID4_HAEIN Length = 75 Score = 91.6 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK +Y K G + +A+ +G +V W KG +++P RCP IER T G+V C Sbjct: 1 MKLRDYFEK---QGRGSLTYLAKQMGAKTSNVCLWAKGKKKVPTNRCPDIERITEGKVTC 57 Query: 61 EELRPDIDWSYLRRS 75 EELRPD++W LR S Sbjct: 58 EELRPDVNWGVLRNS 72 >UniRef50_B0UTL6 Uncharacterized prophage-related protein n=1 Tax=Haemophilus somnus 2336 RepID=B0UTL6_HAES2 Length = 81 Score = 89.7 bits (221), Expect = 2e-17, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 + + K+ +VG Q+ +A+L VS PS++ W+KG ++ + P++ +AT GEV E+LR Sbjct: 2 DKNIKKTINLVGTQTKLAKLCSVSQPSISIWLKG-GKMDVKYIPSLIKATNGEVTPEDLR 60 Query: 65 PDIDWSYLRR 74 PD+DW +R+ Sbjct: 61 PDVDWEVIRQ 70 >UniRef50_A1VPJ4 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A1VPJ4_POLNA Length = 187 Score = 88.5 bits (218), Expect = 5e-17, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSAC 77 Q A A G + + + +++ AE C IER + V+CE LRPDIDW+ +R +A Sbjct: 16 QKAFALRCGTTVGYLRKAGSTGQRIGAELCINIERESLKSVVCEVLRPDIDWASIRHTAP 75 Query: 78 CSQNM-SVKQLNDSNKSSFDHT 98 SQ ++ + + K++ H Sbjct: 76 ASQAQEAINTVAEEAKAAILHV 97 >UniRef50_B2Q6B7 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q6B7_PROST Length = 75 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 35/64 (54%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N + K A +VG Q + G++ +V +W+ ++ E P I +AT G+V +++R Sbjct: 2 NEAIKTAIEIVGTQKKLGEACGITQQAVFKWLHNKAKVSPEHIPLIVKATNGQVKGKDIR 61 Query: 65 PDID 68 PD+ Sbjct: 62 PDLP 65 >UniRef50_B4EWP1 Phage regulatory protein n=15 Tax=Gammaproteobacteria RepID=B4EWP1_PROMH Length = 83 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 2 KKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCE 61 ++A +VGGQSA+AR + +V W+ ++PAE IE+AT+G+V Sbjct: 5 NTTQKHLRRAIDLVGGQSALARAINSKQQNVWFWLNKSGRVPAEFVLPIEQATQGQVTRS 64 Query: 62 ELRPDI 67 +LRPDI Sbjct: 65 QLRPDI 70 >UniRef50_A1TN00 Putative uncharacterized protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TN00_ACIAC Length = 80 Score = 86.2 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 + A + +GG +A +GV +V+ W A C AIERAT G V +LRPD Sbjct: 4 LEAAISAIGGVGKLAEAIGVGQSAVSNWRARGTTPDAAYCVAIERATSGAVSRRDLRPD- 62 Query: 68 DWSYLRRSACCS 79 DW + S Sbjct: 63 DWHLIWPELTAS 74 >UniRef50_D2U108 Conserved hypothetical phage protein n=1 Tax=Arsenophonus nasoniae RepID=D2U108_9ENTR Length = 72 Score = 85.4 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 32/66 (48%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 +NY + A + G Q A+A+ G++ ++ W+ G + + + P + T G V Sbjct: 1 MKNYGIEAAIKIAGSQKALAKKCGLAQSTICDWLNGKKPVSPKSVPDLVEVTGGTVPAYR 60 Query: 63 LRPDID 68 RPD+ Sbjct: 61 FRPDLP 66 >UniRef50_UPI0001AF7BFA hypothetical protein NgonF_03557 n=1 Tax=Neisseria gonorrhoeae FA19 RepID=UPI0001AF7BFA Length = 76 Score = 84.7 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 + CA+ G QS +AR G+SP ++Q KG++ +P + IE++T G V +E+ PD Sbjct: 3 LRDYCAIRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAALIEKSTNGRVTRKEMFPDT 62 Query: 68 DWSYLRRSACCSQNM 82 W + Q Sbjct: 63 -WHLIWPELADDQPK 76 >UniRef50_Q7N1J7 Similarities with unknown protein and with YdaS of Escherichia coli n=3 Tax=Enterobacteriaceae RepID=Q7N1J7_PHOLL Length = 94 Score = 84.7 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK +Y G +A LGVS ++Q G +P RC IE AT G+V Sbjct: 20 MKLNDYISNL---KRGEAKLLAEKLGVSSSYLSQMAHGYAPVPPARCFDIENATNGKVTR 76 Query: 61 EELRPDIDWSYLRRS 75 ++LRP DW + Sbjct: 77 QDLRPH-DWQKIWPE 90 >UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5W3_PSEP1 Length = 82 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 41/73 (56%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 K + K+A V+G Q+ +AR L V+ P+VNQW G R +PA+R IE T G V + Sbjct: 2 KSAEAAKEASRVLGSQAELARRLNVAAPTVNQWCSGERTVPAKRALQIEALTNGAVNRAD 61 Query: 63 LRPDIDWSYLRRS 75 L P W+ + + Sbjct: 62 LCPSFPWNQIDSN 74 >UniRef50_B7LNE3 Represror Cro n=6 Tax=Escherichia RepID=B7LNE3_ESCF3 Length = 77 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M N + + A ++ G Q +A L GV+ P+V +W+ G + A I AT G++ Sbjct: 1 MIMTNQTIQLAISITGSQKRLADLCGVAQPTVWRWLHGGG-IDARYVMKIVSATGGKIKP 59 Query: 61 EELRPDI 67 ++RPD+ Sbjct: 60 ADIRPDL 66 >UniRef50_C6HVZ4 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVZ4_9BACT Length = 85 Score = 83.1 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 K ++A +VG Q+ +A++LG + W+K + AE +E+AT G V E Sbjct: 2 KPTSPLRKAIEIVGSQNKLAKILGKRQSVIWAWLKR-GTVSAEYVLKVEQATGGRVTRHE 60 Query: 63 LRPDI 67 LRPD+ Sbjct: 61 LRPDL 65 >UniRef50_B7LB93 Cro n=22 Tax=root RepID=B7LB93_ECO55 Length = 76 Score = 82.3 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 N + K A +VG Q + VS +V +W+ ++ E +I AT G V ++R Sbjct: 2 NPAIKTAINIVGSQKKLGAACEVSQQAVYKWLHNKAKVSPEHVGSIVTATGGVVKAYQIR 61 Query: 65 PDID 68 PD+ Sbjct: 62 PDLP 65 >UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteobacteria RepID=Q1QIT7_NITHX Length = 260 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 6/65 (9%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + +A V GGQ+ +AR +G+S PSV+ W ++PAER A+E T + E Sbjct: 1 MRDSGLDRAIQVAGGQAELARRIGISQPSVSNW----NRVPAERVIAVEAVTG--ISRLE 54 Query: 63 LRPDI 67 LRPD+ Sbjct: 55 LRPDL 59 >UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R0L1_XYLFA Length = 79 Score = 80.4 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + A +G SA+A LGV +++ W + ++PAERC IER T G V+C ELRPD Sbjct: 3 AIDIAINKLGSVSALAASLGVRQSAISNW-RARGRVPAERCIDIERVTNGAVICRELRPD 61 Query: 67 I 67 + Sbjct: 62 V 62 >UniRef50_B4YK26 Putative uncharacterized protein n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK26_9BURK Length = 79 Score = 79.6 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Query: 1 MKKEN----YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRG 56 MKK+N S A VG Q+ +A LL VS ++ QW ++P E CP IE+ T Sbjct: 1 MKKKNPRIEESLNAAAKAVGNQARLAELLDVSSSAIWQW--KQSEVPPEHCPEIEKLTG- 57 Query: 57 EVLCEELRPDIDWSYLRRSACCS 79 + CE L +DWSYLR + Sbjct: 58 -IRCENLNSTVDWSYLRGTEPNK 79 >UniRef50_C4GHG9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHG9_9NEIS Length = 66 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 + A V+G Q+++A+ LGV P +VN W +G ++PAE IE+ T V ++LR Sbjct: 2 QDAILLAANVIGSQASLAKELGVHPTTVNSWARGRNKIPAETAIKIEKLTNSVVTRQDLR 61 Query: 65 PDI 67 PD+ Sbjct: 62 PDL 64 >UniRef50_C5A7V7 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A7V7_BURGB Length = 93 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + K A GG SA+A LG+S ++ +I+ P E CP IE+ ++G+V CE Sbjct: 9 ERQAELKDAVKQAGGASALAEHLGLSRGAIYDFIRRGNFNP-EHCPEIEKFSQGKVRCEV 67 Query: 63 LRPDIDWSYLR 73 L +DW+++R Sbjct: 68 LNNRVDWAFIR 78 >UniRef50_A4C8R3 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8R3_9GAMM Length = 70 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M ++N K+A ++ GQ A+A+ +GV+ ++ WI +PAE IE T V Sbjct: 1 MTEQNP-LKKAISIAQGQKALAKKIGVTQQCISLWITKNAAVPAEHAIKIETETG--VSR 57 Query: 61 EELRPDI 67 ELRPD+ Sbjct: 58 AELRPDL 64 >UniRef50_B0KSE2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSE2_PSEPG Length = 74 Score = 78.5 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 35/60 (58%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSA 76 G +A AR G S + Q G R+ A +++R T G + CEE+RPDIDW+YLR + Sbjct: 14 GLAAFARHCGTSAGQLKQVAYGNRRASAGLAVSLDRETGGVIRCEEMRPDIDWAYLRNAR 73 >UniRef50_C5BBP1 Conserved domain protein n=2 Tax=Edwardsiella RepID=C5BBP1_EDWI9 Length = 71 Score = 77.3 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 39/65 (60%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 N K+A A+ GGQ +AR GV PSV++W++G ++ A IE AT G++L Sbjct: 1 MTNSLIKEAIALAGGQQELARSCGVRQPSVSEWLRGKKKPSAISAKRIELATGGKILAIN 60 Query: 63 LRPDI 67 +RPD+ Sbjct: 61 IRPDL 65 >UniRef50_Q0AG04 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q0AG04_NITEC Length = 83 Score = 76.6 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M+ Y K + + + A S + G R+ C IER + G V C Sbjct: 1 MELIEYIKKLSISDR---NDFAVCCETSFAHLRNIAYGYRRAGELLCINIERESGGLVKC 57 Query: 61 EELRPDIDWSYLRRSACCSQNMS 83 E LRPD+DW YLR S ++ + Sbjct: 58 ETLRPDVDWGYLRNSRPQTKPIQ 80 >UniRef50_C8UNK0 Predicted antirepressor protein Cro n=4 Tax=Escherichia coli RepID=C8UNK0_ECO1A Length = 100 Score = 76.2 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRR 74 VG A LGVS ++Q G + R IE AT G+V ELRP DW + Sbjct: 12 VGDAKKFAARLGVSSSYLSQMASGRTAISPTRALMIESATEGQVSRAELRPH-DWELIWP 70 Query: 75 S 75 Sbjct: 71 E 71 >UniRef50_D2U112 Phage regulatory protein n=1 Tax=Arsenophonus nasoniae RepID=D2U112_9ENTR Length = 78 Score = 75.0 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKG-VRQLPAERCPAIERATRGEVLCEELR 64 + K+ V G + +A LGVS +V+QW ++P +R AI T + ELR Sbjct: 2 SALKKVINVTGTATRLAAALGVSNMTVSQWKNKYKGRVPVDRVLAIYELTG--ITPHELR 59 Query: 65 PDI 67 PDI Sbjct: 60 PDI 62 >UniRef50_B8IT79 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IT79_METNO Length = 83 Score = 75.0 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 + A +VG Q +AR G+S V++ + RQ+ A AIE+AT G++ +L Sbjct: 3 RHPHIALAIDIVGSQPKLARAAGISQQQVSKLLHCQRQISAGVAIAIEKATAGKIGRWQL 62 Query: 64 RPDIDW 69 RPD W Sbjct: 63 RPDY-W 67 >UniRef50_B7JAE0 Prophage Afe02, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JAE0_ACIF2 Length = 74 Score = 75.0 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 26/51 (50%), Positives = 32/51 (62%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q+ +AR LGV+P V+QWI G + AER IE +T G V ELRPDI Sbjct: 11 SQTLLARKLGVTPGLVSQWITGRTVITAERAAQIELSTNGAVTRAELRPDI 61 >UniRef50_B4SNJ4 CI repressor n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNJ4_STRM5 Length = 143 Score = 75.0 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 + +A GG +++A LGV +V+ W ++P IE T V +L P Sbjct: 2 DALDRAVKAAGGVTSLATHLGVRQSAVSNWRSR-GRVPPAMAIPIESVTG--VSRHDLCP 58 Query: 66 DI 67 DI Sbjct: 59 DI 60 >UniRef50_A7MHP9 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MHP9_ENTS8 Length = 73 Score = 74.6 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 8/73 (10%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLG------VSPPSVNQWIKGVRQLPAERCPAIERAT 54 M E + +A + GGQS +AR + V V W+ ++ P + +IE+ T Sbjct: 1 MTPEQSALTEAIEIAGGQSELARKISLEAGGLVKQQQVWNWLHREKKAPIKHTVSIEKLT 60 Query: 55 RGEVLCEELRPDI 67 V E+LRPD+ Sbjct: 61 G--VPKEKLRPDV 71 >UniRef50_A9N3H0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A9N3H0_SALPB Length = 85 Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKG-VRQLPAERCPAIERATRGEVLCEELRPD 66 ++A G S +A LLG+ P SV++W +P R I + T + ELRPD Sbjct: 11 LEKAIKKAGNASNLAALLGIKPMSVSRWKTRYNGAVPPGRVLPIFKITG--ITPHELRPD 68 Query: 67 I 67 I Sbjct: 69 I 69 >UniRef50_Q6JIG9 Gp62 n=1 Tax=Burkholderia phage phi1026b RepID=Q6JIG9_9CAUD Length = 104 Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRG-EVLCEELR 64 + A ++ Q+ AR +GVSP + + WIK R+ P E CP +ERA V+CE LR Sbjct: 17 ETLCLAVSLCDSQADFARRVGVSPQAASNWIKRDRRAPIEACPFVERAVDDPRVVCETLR 76 Query: 65 PDID-WSYLRRSAC 77 PD W LR+ Sbjct: 77 PDYQGWVVLRQLML 90 >UniRef50_D1TFB3 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFB3_9BURK Length = 97 Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 13 AVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYL 72 + G +A +GVS ++Q G+ + ERC IE+AT G V +L+P +W L Sbjct: 10 SERGTAKKLASSIGVSQSFLSQMASGLSPISQERCFLIEQATAGAVARWDLKPH-NWHKL 68 Query: 73 RRSACCS 79 + Sbjct: 69 WPELVGA 75 >UniRef50_C6AM32 Antirepressor Cro n=5 Tax=root RepID=C6AM32_AGGAN Length = 70 Score = 73.5 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 +N + ++A ++ G Q +++ GVS SV+ W+ G + A+ P I +AT+G+V ++ Sbjct: 1 MKNEAIEKAISICGSQVKLSQECGVSQVSVSFWLNGGG-INAKYIPRIVKATKGKVTEKQ 59 Query: 63 L 63 + Sbjct: 60 I 60 >UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PM33_9COXI Length = 296 Score = 72.7 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + +A +G MA+ LG+ + WIKG ++P E IE T GE+ ++ Sbjct: 1 MQEAMLDKAIYSLGSVRHMAKKLGIHREHIYAWIKGFSKIPLEYALQIEYLTGGEINWKD 60 Query: 63 LRP 65 L P Sbjct: 61 LVP 63 >UniRef50_A9YWX8 Putative Cro n=1 Tax=Burkholderia phage Bups phi1 RepID=A9YWX8_9CAUD Length = 103 Score = 72.3 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 1 MKKEN---YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGE 57 MK N + + A G QSA+ARL+G P +++W+ + E C + A Sbjct: 1 MKPTNCSVPALQAAIQKAGSQSALARLIGKKQPHIHKWLHSPNAMRPENCVLVGNAVG-- 58 Query: 58 VLCEELRPDIDWSYLRR 74 + + RP DW + Sbjct: 59 IPYRDFRP-TDWHLIWP 74 >UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7H4_ACIF2 Length = 69 Score = 71.6 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 4/56 (7%) Query: 12 CAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +GG +A+ARL+G++ +V+QW + +P ++ IERAT G + +ELRPDI Sbjct: 7 IKSLGGPTAVARLIGITKGAVSQW----KAIPVDKAILIERATHGSITRQELRPDI 58 >UniRef50_Q9PBL8 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa RepID=Q9PBL8_XYLFA Length = 81 Score = 71.6 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 ++ +A V+G Q A+A LLG+ P V+QW+ R++ IE AT + + Sbjct: 2 SQSKPIARAVEVLGSQKALADLLGIHPALVSQWVTSRRRVAPRHVLTIESAT--SISRHD 59 Query: 63 LRPDI 67 LRPDI Sbjct: 60 LRPDI 64 >UniRef50_B5XSM1 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B5XSM1_KLEP3 Length = 71 Score = 71.6 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 + A V G + +A LGVS +V+QW K +P+ R + AT V ELRPD Sbjct: 3 ALDNAIRVAGSANKLASTLGVSGMAVSQW-KTKGIVPSSRVLQVFNATG--VTPHELRPD 59 Query: 67 I 67 + Sbjct: 60 L 60 >UniRef50_Q37907 Regulatory protein cro n=3 Tax=root RepID=RCRO_BPD3 Length = 73 Score = 71.2 bits (173), Expect = 9e-12, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%) Query: 9 KQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDID 68 K+ A G Q A LGV +V+ W++G + + T G+ E+L P Sbjct: 6 KELVAHFGTQDETAAKLGVDQSTVSGWVRGKHGMSPVVAKRAQVLTDGKFKKEDLCPAFP 65 Query: 69 WSYLRRSA 76 W L A Sbjct: 66 WEVLSAVA 73 >UniRef50_A4JMH8 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMH8_BURVG Length = 94 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 21 MARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSAC 77 A G + + I G R+ + C AIER + G V +LRPD DW + Sbjct: 32 FAARCGTTAAFLRNVIYGQRKAGEKLCVAIERESGGVVTRRDLRPD-DWHLIWPELA 87 >UniRef50_B7LJJ9 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LJJ9_ESCF3 Length = 82 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLG------VSPPSVNQWIKGVRQLPAERCPAIERAT 54 M E + +A A+ GGQS +AR L V V W+ ++ PA+ IE+ T Sbjct: 1 MTPEQLALSEAIALAGGQSELARKLTASSGHLVKQQHVWNWLNREKRPPAKLSIFIEKTT 60 Query: 55 RGEVLCEELRPDI 67 + E+LRPDI Sbjct: 61 G--ISKEKLRPDI 71 >UniRef50_C0AX08 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AX08_9ENTR Length = 77 Score = 70.8 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGV-SPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 M +ENY+ ++A +G SA++R+ G SP SV WIK ++PAER + V Sbjct: 1 MHQENYT-EKAIRTIGVPSAVSRMFGFNSPQSVFNWIK-NNKVPAERVIQLCELGGWVVS 58 Query: 60 CEELRPDI 67 +LRPD+ Sbjct: 59 PHQLRPDL 66 >UniRef50_Q2L2G5 Phage protein n=1 Tax=Bordetella avium 197N RepID=Q2L2G5_BORA1 Length = 87 Score = 70.4 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M+ Y ++ G Q A+A+ +GV P V++W++G R +P E AIE AT G V Sbjct: 1 MRLAEYLSQK----RGRQIALAKAIGVHAPDVSRWVRGKRPIPLEYGAAIEIATGGAVTR 56 Query: 61 EELRPDIDWSYLRRSACCSQNMSVKQ 86 ++ PD D+ + + ++ +Q Sbjct: 57 KDEWPD-DYRRIWPELAAAPTLAAQQ 81 >UniRef50_A7JSL2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=A7JSL2_PASHA Length = 66 Score = 70.0 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M +Y + G ++ A+ LG+S + Q G +PA IE T GEV Sbjct: 1 MNLTSYLSDRP---RGFKADFAKKLGISKSYLRQVETGYSPMPAYLAKKIEEVTNGEVAK 57 Query: 61 EELRPDIDW 69 ELRPD+ W Sbjct: 58 SELRPDL-W 65 >UniRef50_D0ZSX1 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S RepID=D0ZSX1_SALT1 Length = 86 Score = 70.0 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGV-RQLPAERCPAIERATRGEVLCEELR 64 + +A G + +A LL VS +++ W +PA+R I AT V ELR Sbjct: 8 KAIDKAITRAGTATRLAELLEVSAMTISHWRNRYQGVVPADRVLPIYSATG--VTPHELR 65 Query: 65 PDI 67 PD+ Sbjct: 66 PDL 68 >UniRef50_Q93E25 LygE n=1 Tax=Salmonella enterica subsp. enterica serovar Enteritidis RepID=Q93E25_SALEN Length = 118 Score = 70.0 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + Y K QS +A L G S ++ G QL E+ I AT EV Sbjct: 1 MTLDEYLKKNRVR----QSCLATLAGCSQSMISLVTTGRSQLSPEKVLRIAEATNFEVTP 56 Query: 61 EELRPD 66 ELRPD Sbjct: 57 HELRPD 62 >UniRef50_UPI00016AD132 hypothetical protein Bpse38_34097 n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AD132 Length = 84 Score = 69.2 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Query: 1 MKKEN---YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGE 57 MK N + +A G QSA+ARL+G P +++W+ + E C + A Sbjct: 1 MKPTNCSAPALLRAIEKAGSQSALARLIGKKQPHIHKWLHSPNAMRPENCVLVGAAVG-- 58 Query: 58 VLCEELRPDIDWSYLRRS 75 + + RP DW + Sbjct: 59 IPYRDFRP-YDWKLIWPE 75 >UniRef50_C2DWU1 LygE protein n=2 Tax=Escherichia RepID=C2DWU1_ECOLX Length = 91 Score = 68.9 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M +Y ++ Q +L G+S V++ + G + E+ + T EV Sbjct: 1 MNLRDYLKEKHI----TQLQFGKLTGLSQVHVSRVLGGYERFSPEKALRVAEVTNFEVTP 56 Query: 61 EELRPDI 67 ELRPDI Sbjct: 57 HELRPDI 63 >UniRef50_Q4FUH4 Putative uncharacterized protein n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FUH4_PSYA2 Length = 84 Score = 68.9 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + +A GGQ+ +A L+G +V QW+ + A I T + E Sbjct: 7 TPKQALAKAVKKAGGQTELANLIGTKQQNVWQWLNRDGKASARYVSKISEKTN--IPSYE 64 Query: 63 LRPDI 67 LRPDI Sbjct: 65 LRPDI 69 >UniRef50_A5UGL7 Putative uncharacterized protein n=5 Tax=Pasteurellaceae RepID=A5UGL7_HAEIG Length = 68 Score = 68.9 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 +N + A G Q +A GV+ +V W+KG + + P I +A+ G+V + Sbjct: 1 MQNETINLAIQECGTQKKLANACGVTQGAVALWLKGGG-INGKYIPLIAKASNGKVTETD 59 Query: 63 L 63 + Sbjct: 60 I 60 >UniRef50_UPI0001B52E27 hypothetical protein ShiD9_12110 n=1 Tax=Shigella sp. D9 RepID=UPI0001B52E27 Length = 87 Score = 67.3 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGV-SPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 M +NY+ ++A G S +AR G S SV W+ Q+P+ER + V Sbjct: 1 MSSQNYT-EKAVKAAGKSLSEVARRFGFKSTQSVANWV-INNQVPSERVLQLCELGNWSV 58 Query: 59 LCEELRPDI 67 ELRPDI Sbjct: 59 TPHELRPDI 67 >UniRef50_C8U3V4 Predicted antirepressor protein Cro n=19 Tax=Enterobacteriaceae RepID=C8U3V4_ECO10 Length = 90 Score = 67.3 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 S ++ Q+ + R +GV+ +V QW +P ++ + + + EV E+RP Sbjct: 3 DSTREKIRQKYTQAEIGRYMGVAQQTVWQWFSFG--VPPKQVIPLCQLMKWEVTPHEIRP 60 Query: 66 DI 67 DI Sbjct: 61 DI 62 >UniRef50_B7KSY7 Putative chaperone n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KSY7_METC4 Length = 77 Score = 66.9 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + + +A GG A+ +G+S +++QW + P R A+E A+ V E Sbjct: 1 MSDVALSRAIKEAGGPKALGDAIGISSQAISQW----TECPPRRVLAVEAASG--VSRHE 54 Query: 63 LRPDI 67 LRPD+ Sbjct: 55 LRPDL 59 >UniRef50_B8F4M6 Phage transcriptional regulatory protein/antirepressor Cro n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F4M6_HAEPS Length = 66 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 N +A + G + +A GVS +V+ W++G + A+ I AT G++ +E+ Sbjct: 2 NKVIDKAISECGSRDKLATACGVSVMTVSNWVRGFG-IKAKHIKLISDATNGKISVDEI 59 >UniRef50_A6WVE7 Putative uncharacterized protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVE7_OCHA4 Length = 79 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 +A VGG A+AR L + ++ W +++PAER IER + + ELRP Sbjct: 18 EIVAKAAEEVGGVVALARALNIKHTAMYSW----KRVPAERVLEIERVSG--ISRHELRP 71 Query: 66 DI 67 D+ Sbjct: 72 DL 73 >UniRef50_D1NX87 Cytoplasmic chaperone TorD n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NX87_9ENTR Length = 78 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Query: 8 FKQACAVVGGQSAMARLLG------VSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCE 61 ++A GGQ+ +A+ + V + W+ +++PA++ +ERA+ V Sbjct: 13 LQKAIDATGGQTQLAKRISDISNKPVKQQQIWNWLNRNKRVPADKVLIVERASG--VSRN 70 Query: 62 ELRPDI 67 LRPD+ Sbjct: 71 TLRPDL 76 >UniRef50_A4N1A6 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A4N1A6_HAEIN Length = 67 Score = 65.8 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + Y + G Q+ AR +G++P ++Q I G + P AIE+AT+ +V Sbjct: 1 MSLKAYFSDKP---RGFQADFARKIGIAPSFLSQIISGKSKAPPSVAVAIEKATKRQVKK 57 Query: 61 EELRPDI 67 E+ PD+ Sbjct: 58 SEILPDV 64 >UniRef50_D2TX41 Phage regulatory protein n=1 Tax=Arsenophonus nasoniae RepID=D2TX41_9ENTR Length = 96 Score = 65.8 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 + K + QS + R LG P +++ W + ++PAE ++ + ++ ELR Sbjct: 20 DIDLKNKIFAITTQSELGRKLGKRPQTISVWFR--NRVPAECVFSMAKVLEWQITPHELR 77 Query: 65 PDI 67 PDI Sbjct: 78 PDI 80 >UniRef50_B7UQF7 Predicted protein n=3 Tax=Escherichia coli RepID=B7UQF7_ECO27 Length = 93 Score = 65.4 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSAC 77 Q A G S + + + + L A C IERA+ GEV ++LRP DW + Sbjct: 16 QRMFACECGTSIGYLRKALSKGQVLGASLCVLIERASNGEVTRQQLRP-FDWMNIWPELE 74 Query: 78 CSQ 80 ++ Sbjct: 75 DTK 77 >UniRef50_B7KYS5 Putative uncharacterized protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KYS5_METC4 Length = 82 Score = 64.6 bits (156), Expect = 8e-10, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + A ++G ++ + GV+ ++ + K ++ E IE+ATR + Sbjct: 1 MSTR-SLIQAAITLLGSEAKLGAACGVTQGAIWK-AKTAGRVSGELAVKIEKATRCAIPR 58 Query: 61 EELRPDI 67 LRPD+ Sbjct: 59 WRLRPDL 65 >UniRef50_D0FT83 Lambda repressor-like protein n=1 Tax=Erwinia pyrifoliae RepID=D0FT83_ERWPY Length = 74 Score = 64.6 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 N ++A +VG Q +A+ +GV+ +V++W+ G + ++ A+ AT G V EE+ Sbjct: 2 NIVIQKAIDIVGSQRELAQKVGVNQSAVSKWLCGGG-IRSKYITALVIATNGTVTFEEI 59 >UniRef50_B1G5M8 Putative uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5M8_9BURK Length = 102 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 6/79 (7%) Query: 7 SFKQACAVVGGQSAMARLLG----VSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + ++A + G + +AR + + ++ W +P + P + A G+V E Sbjct: 14 ALQKAIEICGSRRELARRISLFSPCTSGRIDMWFSRNTVVPIDAVPFVAAAVDGQVSVYE 73 Query: 63 LRPDI--DWSYLRRSACCS 79 L P+ W LR Sbjct: 74 LCPEYAEGWRVLRALLLNE 92 >UniRef50_C3X1S2 Predicted protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X1S2_OXAFO Length = 90 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 F +A + GG + ++R + + Q +G +LP I AT G V +++ P Sbjct: 3 EEFNKAIQICGGLTKLSRAIDMPVSFAWQIKEGKSRLPEGYGRRIFDATHGAVSLKKMFP 62 Query: 66 DIDWSYLR 73 D W Sbjct: 63 D-SWMNYW 69 >UniRef50_Q6J1N2 Gp45 n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N2_9CAUD Length = 72 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 K A GG + +A G+S S+ +WI ++P +R + R T + +L P Sbjct: 2 SLIKDAVTEAGGATVVATAFGISRISIYEWID-KGRVPEKRVLPLARLTNWKFTPHQLAP 60 >UniRef50_C8U3E2 Predicted antirepressor protein Cro n=1 Tax=Escherichia coli O103:H2 str. 12009 RepID=C8U3E2_ECO10 Length = 90 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK +Y + Q+A+AR LGV+P +VNQW +PA + +V Sbjct: 1 MKGNDY---DKLRTLIAQNAIARNLGVTPQAVNQWFS-KNTIPARFVLRVCEVVAWKVTP 56 Query: 61 EELRPDI 67 LRPD+ Sbjct: 57 HGLRPDL 63 >UniRef50_C7LJH3 Phage related protein n=1 Tax=Brucella microti CCM 4915 RepID=C7LJH3_BRUMC Length = 192 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Query: 11 ACAVVGGQSAMARLLGVSP-PSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 A GG A+AR LG+ SV W +++PA+ IE T + C ELRPDI Sbjct: 127 AIQAAGGVVALARGLGIKHHQSVYGW----KKIPADYVLRIEALTG--IPCCELRPDI 178 >UniRef50_C6XEC1 Phage regulatory protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEC1_METSD Length = 81 Score = 63.1 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 2 KKENYSFKQACAVV-GGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 K + Q +++ GG+ A+A L +S ++++W+K ++P ER +E ++ Sbjct: 6 KHQKNVVDQVISLIEGGRPALAAALDISEQAIHKWVKS-GRIPTERVRDVEELINFQITR 64 Query: 61 EELRPDI 67 E+RPDI Sbjct: 65 YEMRPDI 71 >UniRef50_C5CJM5 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CJM5_VARPS Length = 81 Score = 62.3 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 9 KQACAVVG-GQSAMARLLGVS-PPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 ++ + G + +AR+LG +V W G+ P C +E +G++ +ELRP Sbjct: 8 RKVLKLAGNSHAEVARILGYEDRRNVWPWTNGLNPFPPYHCRTLEDHFKGQITRKELRPH 67 Query: 67 IDWSYLRRSACC 78 DW Sbjct: 68 -DWQKHWPDLAI 78 >UniRef50_B1J5K2 Putative uncharacterized protein n=1 Tax=Pseudomonas putida W619 RepID=B1J5K2_PSEPW Length = 103 Score = 61.9 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 +++ GGQ A L V+ +V+ W++G + AE +R T G ELRP Sbjct: 7 EIYQRLVEHFGGQDLTAAALKVNQSTVSGWVRGKHAMSAETAFLAQRKTCGAFSAIELRP 66 Query: 66 DI 67 + Sbjct: 67 SL 68 >UniRef50_C8UC34 Predicted antirepressor protein Cro n=2 Tax=Escherichia coli RepID=C8UC34_ECO1A Length = 85 Score = 61.5 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q+A+AR +GV+P +VN W +P+ + +V LRPD+ Sbjct: 16 QNAIARYIGVTPQAVNLWFS-KNSVPSRFVLRVCELVEWKVTPHGLRPDL 64 >UniRef50_C6RL40 Putative uncharacterized protein n=2 Tax=Acinetobacter RepID=C6RL40_ACIRA Length = 82 Score = 61.5 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%) Query: 19 SAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACC 78 A+ S +NQ + G + A I++ + G V C+ L P+ D++Y+R A Sbjct: 22 KDFAKRCQTSLGYLNQIMYGNSKCSASLAIKIDKESDGAVSCDLLCPEADFNYVRNQALI 81 Query: 79 S 79 + Sbjct: 82 A 82 >UniRef50_C4TVB5 Gp45 n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TVB5_YERKR Length = 82 Score = 58.1 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 1 MKKENYSF-KQACAVVGGQSAMARLLGV-SPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 M + + +A VG S ++R S SV WI Q+PA+R + + EV Sbjct: 1 MSSKCKNITDRAIRAVGSLSRVSRAFEFKSVQSVANWI-INNQVPADRVIQLCAMGKWEV 59 Query: 59 LCEELRPDI 67 ELRPDI Sbjct: 60 TPHELRPDI 68 >UniRef50_D2U4K7 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U4K7_9ENTR Length = 76 Score = 57.3 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIE--RATRGEV 58 M Y + Q++ A ++GVS ++Q I G + + C AIE RAT V Sbjct: 1 MTLNEYLLHKKI----SQTSFATIVGVSQGFISQVIAGKYK--PKGCKAIEWSRATEWLV 54 Query: 59 LCEELRPD 66 EL D Sbjct: 55 TPHELNSD 62 >UniRef50_A1TVQ0 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1TVQ0_ACIAC Length = 84 Score = 57.3 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 28 SPPSVNQWIKGV-RQLP-AERCPAIERATRGEVLCEELRPDIDWSYLRRSA 76 S + QW G R++P C AIE+AT G+V ++LRP DW+ + Sbjct: 31 SDAQIRQWQHGYARRIPSPLNCVAIEQATGGQVTRKDLRPH-DWAAIWPEL 80 >UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A7FIY8_YERP3 Length = 68 Score = 56.9 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 16/84 (19%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKK K GG A LG+ P+V +W +P ++ IER T G Sbjct: 1 MKK-----KDVVKFFGGVVNTAIALGIKHPAVCRW---GEIIPEKQAMRIERITHG---- 48 Query: 61 EELRPDIDWSYLRRSACCSQNMSV 84 ELR D + +S+ N + Sbjct: 49 -ELRYD---PAMYQSSLIKINTQI 68 >UniRef50_C7BGF8 Putative uncharacterized protein n=2 Tax=root RepID=C7BGF8_9CAUD Length = 79 Score = 56.2 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 13 AVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR-----PDI 67 A G +A +G ++ W R +P IER T G+V +L PDI Sbjct: 9 AERGRLVKLAAAIGAHASDLSAWANKKRPVPIPFGWPIERETDGQVRRVDLFSADVIPDI 68 Query: 68 DWSYL 72 W L Sbjct: 69 -WPEL 72 >UniRef50_A7C750 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C750_9GAMM Length = 110 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 15/83 (18%) Query: 3 KENYSFKQACAVVG--GQSAMARLLGVSPPSVNQWIKGVRQLPAERC---------PAIE 51 KEN K+ + +G Q A +GVSP +VN+W +G ++P E IE Sbjct: 2 KENIDLKREISELGFESQKKFAEFMGVSPRTVNRWCRGFSKVPREVVSLCTTLREKQRIE 61 Query: 52 RATRGEVLCEELR-PD---IDWS 70 R + V R PD ++W Sbjct: 62 REVKKIVEEGYSRLPDGRMVNWH 84 >UniRef50_B0VKG4 Putative uncharacterized protein n=3 Tax=Acinetobacter RepID=B0VKG4_ACIBS Length = 83 Score = 54.2 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%) Query: 12 CAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR--GEVLCEELRPD--I 67 +GG +A+ARLLG++PPSV+ W + +P ++ + G +EL PD Sbjct: 7 IDKLGGVTAVARLLGITPPSVSGW----KAIPLDKKIRLAVIAEDLGLTTRKELFPDNYQ 62 Query: 68 D-WSYLRRSACCSQN 81 D W LR S+N Sbjct: 63 DIWIELRPQTTKSKN 77 >UniRef50_B0QXI3 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis 29755 RepID=B0QXI3_HAEPR Length = 74 Score = 53.8 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSAC 77 Q A G + + + I L AE C AIER ++GEV + L P W + Sbjct: 16 QRDFAERCGTTLGYLRKSISKKSILGAEICVAIERESKGEVTRKHLVPH--WEFRWPELI 73 >UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB6_AERS4 Length = 62 Score = 53.8 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 8/62 (12%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKKE+ A + G + +AR L +S P+V++W +P R IE T G++ Sbjct: 1 MKKED-----AISYFGSAAELARNLNISEPAVSRWGDI---IPKGRAYQIEVLTGGKLKA 52 Query: 61 EE 62 ++ Sbjct: 53 DQ 54 >UniRef50_P14816 Gene 30 protein n=2 Tax=root RepID=VG30_BPPH8 Length = 73 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 2 KKENYS--FKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 KK N S ++A VG Q +A +GV+P ++N K LP + E T + Sbjct: 4 KKSNASTPLEKAINAVGGSQKVLAEKVGVTPQAINMLKKRGGSLPVTKMRKYEEVTG--L 61 Query: 59 LCEELRPDI 67 E L P I Sbjct: 62 PREVLYPGI 70 >UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax=Gammaproteobacteria RepID=Q88MM1_PSEPK Length = 58 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 QA G SA+A+ LGV+ +V QW +P R IER T+G + Sbjct: 5 QAIQHFGSISALAKALGVTYEAVRQWAD----VPELRQYQIERLTKGALKA 51 >UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q083R5_SHEFN Length = 61 Score = 52.3 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 A GGQ +A++L VS P++++W +P R I+ T G++ Sbjct: 5 DVIAHFGGQGRLAKVLDVSQPAISKW---GDTVPLLRAYQIQVITNGKLK 51 >UniRef50_B4EFR1 Hypothetical phage protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EFR1_BURCJ Length = 84 Score = 52.3 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 4/84 (4%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M K +Q Q A G + + + + C +IER ++G V Sbjct: 3 MDKLKSLLRQMTREEQAQFCFA--CGTTLGYMRKALSVGAIFGPALCVSIERESKGLVTR 60 Query: 61 EELRPDIDWSYLRRSACCSQNMSV 84 +L P+ DW + Q V Sbjct: 61 RDLHPN-DWQDIWPELA-DQPTQV 82 >UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_BPP22 Length = 61 Score = 52.3 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 9 KQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 K G Q A+A+ LG+S +V+QW +P + +E T G + +E Sbjct: 4 KDVIDHFGTQRAVAKALGISDAAVSQW---KEVIPEKDAYRLEIVTAGALKYQE 54 >UniRef50_B6AS87 Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AS87_9BACT Length = 72 Score = 51.9 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 1 MKKENYSFKQACAVVGGQSA-MARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 MK Y + + Q +A +G S + Q + IE AT G+V Sbjct: 1 MKLNEYMRE----LTRSQKEDLAGRVGTSLNYLFQLSGEFSVPGPKIALRIEHATGGQVT 56 Query: 60 CEELRPDI 67 ELRPDI Sbjct: 57 RHELRPDI 64 >UniRef50_C8U7L5 Predicted transcriptional regulator n=3 Tax=Enterobacteriaceae RepID=C8U7L5_ECO10 Length = 79 Score = 51.1 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + Y + + Q+ A ++GVS V+ I G + +AT V Sbjct: 1 MTLDEYLRQSSIR----QADFAAIVGVSQGFVSGVITGRYMPQGRKAIEWAKATDWNVTP 56 Query: 61 EELRP 65 EL P Sbjct: 57 HELNP 61 >UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria RepID=C6M779_NEISI Length = 61 Score = 51.1 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 G +SA A+ L VSP +V QW +P ++ IE+ T G++ Sbjct: 5 DVLKFFGSKSATAQHLDVSPSAVTQWKDI---IPEKQAYRIEKITNGKLK 51 >UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, prophage-related n=9 Tax=Gammaproteobacteria RepID=Q2SPC5_HAHCH Length = 64 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 A A GG+S +A LGV+P SV+Q LP R +ER T G++ Sbjct: 5 DAVAYFGGKSKLANALGVAPASVSQ---RGEFLPMLRAYQVERMTGGKLR 51 >UniRef50_UPI0001873AE2 hypothetical protein PSPTOT1_4062 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873AE2 Length = 89 Score = 50.0 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 24 LLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSAC 77 G + + Q G +Q A +ER T G + + LRP+ DW + Sbjct: 34 RTGTTRGYLRQIAYGNKQASATVASVLERETEGLLTRKSLRPN-DWHVIWPELA 86 >UniRef50_C4U3C1 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U3C1_YERKR Length = 72 Score = 50.0 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Query: 8 FKQACAVVGG-QSAMARLLGVSPPSVNQWI-KGVRQLPAERCPAIERATRGEVLCEELRP 65 ++A VGG Q +A+ LGVS ++ +G LP +R R T + E+L P Sbjct: 9 LEKAVQAVGGKQKTLAQRLGVSEQAITLMKQRGKGYLPRKRIEDFVRVTG--LKKEDLYP 66 Query: 66 DI 67 D+ Sbjct: 67 DV 68 >UniRef50_B1WN54 Transcriptional regulator, Cro/CI family-related protein n=1 Tax=Vibrio fischeri ES114 RepID=B1WN54_VIBF1 Length = 61 Score = 49.6 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 9/68 (13%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKKE GG +A L + +V+QW +P R IER T G + Sbjct: 1 MKKEA-----VIKHFGGVVKVASALKIDHSAVSQW---GENVPQLRAFEIERITNGALKA 52 Query: 61 EELRPDID 68 + P+ D Sbjct: 53 -DFTPNQD 59 >UniRef50_P75975 Uncharacterized protein ymfT n=13 Tax=root RepID=YMFT_ECOLI Length = 66 Score = 49.2 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q +A +G +P + G ++ +E+ T G + +LRPDI Sbjct: 13 QGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDI 62 >UniRef50_C0AW02 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AW02_9ENTR Length = 82 Score = 48.8 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 5/79 (6%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK Y KQ QS +++GV+ ++Q I G + T V Sbjct: 1 MKLGLYLKKQKI----SQSEFGKMVGVTQGFISQVIAGSYLPKGRKAIEWSAKTNWLVTP 56 Query: 61 EELRPDIDWSYLRRSACCS 79 +L P +D+ Sbjct: 57 HDLNP-VDYPNPWDGLPKE 74 >UniRef50_A3ETJ5 Putative uncharacterized protein n=1 Tax=Leptospirillum rubarum RepID=A3ETJ5_9BACT Length = 70 Score = 48.8 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%) Query: 20 AMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 MA + + + G + C IE AT G+V ELRPDI Sbjct: 17 KMAEEAKTTVAYLYKLAGGHGKPGWRICSRIEHATEGQVTRHELRPDI 64 >UniRef50_A9BV81 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BV81_DELAS Length = 99 Score = 48.4 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 15/35 (42%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVR 40 +A A G Q +A +GV V+ W G R Sbjct: 5 ELIDKAVAAAGSQVKLAEKMGVKQQEVSSWRTGKR 39 >UniRef50_Q2W5Y9 Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W5Y9_MAGSA Length = 65 Score = 48.4 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 7 SFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 + + + G + A+A L+GV+ P+V++W G + I AT G V + Sbjct: 2 TLARFMELAGMTEEALAALVGVTQPAVSKWKHGRAIPRPAQMAKIVAATEGAVTPADFF 60 >UniRef50_C6XEC2 Putative phage repressor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEC2_METSD Length = 226 Score = 48.4 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 M + K+A G Q+ +A GVS +V++WI G Q+ E + A Sbjct: 1 MNEVGKLIKEALEHQGKTQAWLAEFCGVSNNAVSKWINGSGQISRENIRKVANALG 56 >UniRef50_Q7ME19 Putative uncharacterized protein VVA0865 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7ME19_VIBVY Length = 84 Score = 48.4 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 22 ARLLGVSPPSVNQWIKGVRQ-LPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQ 80 A G + + + + R + + C +ER + G+V ++LRPD DW + + Sbjct: 20 AIRAGTTLRYLRKIVSIKRTTIHPKTCALLERESSGKVSRKDLRPD-DWFEIWPELAVKE 78 >UniRef50_Q2P3J1 Phage-related protein n=1 Tax=Xanthomonas oryzae pv. oryzae MAFF 311018 RepID=Q2P3J1_XANOM Length = 140 Score = 48.1 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 5 NYSFKQACA--VVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 + + A + G +A +G+S +++QW G + +P ER + R Sbjct: 4 DTLVELAIQRSLRGSLRGLAEQMGISSGALSQWKLGNKPIPDERIQQLARIAG 56 >UniRef50_C4SVT1 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C4SVT1_YERFR Length = 86 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 19/64 (29%), Gaps = 4/64 (6%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK Y + Q A + S V+ + G I AT+ V Sbjct: 5 MKLSEYLNRNGI----SQKIFATSINASQGYVSHIVVGRHAPRGIMALNIAAATQWAVTP 60 Query: 61 EELR 64 EL Sbjct: 61 HELN 64 >UniRef50_D0ZTD1 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S RepID=D0ZTD1_SALT1 Length = 79 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 K + Q ++ G+S +V +W+ +P R + +V E+ P Sbjct: 5 LKIKISNHMTQMSIGEHFGISSQAVGKWL-RKGVIPPRRILPLCEILEWKVTPHEIDP 61 >UniRef50_B0U2N7 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa M12 RepID=B0U2N7_XYLFM Length = 81 Score = 46.5 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 22/50 (44%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 Q+ AR + + + + ++ ++ A+ G V +LRPD+ Sbjct: 16 QAHYARKANTTIGYLRKALCKGQRFDGALARRLDEASGGRVSRYDLRPDV 65 >UniRef50_B2I5H4 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa M23 RepID=B2I5H4_XYLF2 Length = 86 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%) Query: 20 AMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +A S ++ G ++ + ++ER T G V +LRPDI Sbjct: 23 QLATRAVCSHKTLYMIALGHKRAGHQLVKSLERVTNGAVSRYQLRPDI 70 >UniRef50_B7QPX1 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QPX1_9RHOB Length = 74 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 2 KKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 K +Y ++ Q+ A +GVS +++ G + + IERAT G V Sbjct: 3 KLSSYLKEKRIR----QADFAEQVGVSQGVISRLANGASKPGLDLAVRIERATAGSVSA 57 >UniRef50_A1W3Z6 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1W3Z6_ACISJ Length = 97 Score = 46.1 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPA 44 M + N+ ++A ++ G + +A++LG+ P++ W G R A Sbjct: 4 MSQLNFLIEKAASIAGSEYKLAQMLGMQQPTITAWKTGKRPCSA 47 >UniRef50_B8INW8 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8INW8_METNO Length = 79 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MK Y + S A +GV+ ++ ++ G R+ + I RAT G+V Sbjct: 1 MKLAAYLADREIKD----SDFAARIGVTRQTLWRYKSGERRPEWDVLERISRATDGQVTP 56 Query: 61 EELRPDID 68 + D Sbjct: 57 NDFLSDAP 64 >UniRef50_B0N104 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N104_9FIRM Length = 242 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 5 NYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 N + + G Q +A LGVS SV++W G ER I + +EL Sbjct: 4 NDNLNKYRKQKGLSQEELAFRLGVSRQSVSKWESGQSTPELERIIEIADLFG--ISLDEL 61 >UniRef50_D2U1N3 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N3_9ENTR Length = 72 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 + K GG A+A+LL +S ++ QW +P R I + + E+L Sbjct: 12 EALKATIEKAGGVPALAKLLNISDQAIRQWTY-KGYIPPSRYAQINKLLD--IPLEDL 66 >UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia pyrifoliae RepID=D0FSA9_ERWPY Length = 67 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 9 KQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCE 61 + A G +S +A V+ PSV +W R +P R + T G + E Sbjct: 4 EDAIKFFGSKSKLAAAANVTRPSVTRW---GRIIPKLRAMELAAITNGALQYE 53 >UniRef50_D2UAK5 Hypothetical phage-related protein n=2 Tax=Xanthomonas albilineans RepID=D2UAK5_XANAL Length = 275 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 5 NYSFKQACA--VVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 N + A + G +A +G+S ++QW G + +P ER + + Sbjct: 4 NTLVELAIQRSLRGSLRGLAEQMGISSGVLSQWKLGNKPIPDERIQQLAKIAG 56 >UniRef50_A5CUZ3 Putative plasmid maintenance system, antidote protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CUZ3_CLAM3 Length = 367 Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 18/39 (46%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 Q A+ G+S VNQ ++G + E IER T Sbjct: 32 SQVQFAQRCGLSTKHVNQILQGQSAVTPETALLIERVTG 70 >UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Arsenophonus nasoniae RepID=D2TVN9_9ENTR Length = 71 Score = 45.4 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 11 ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 + + +A++LG+SP +V QW +P + IE+ T G + Sbjct: 6 VVSYFRSKRNVAKVLGISPQAVGQWRD---VIPEKSALLIEKITNGSLK 51 >UniRef50_B3G2I3 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G2I3_PSEAE Length = 109 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 11/67 (16%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLP----------AERCPAIERATRGE 57 KQA GG S +A VSP +V +W+ +LP AER + R + Sbjct: 34 LKQAVEKAGGVSQVAASCEVSPRAVYKWLAS-GRLPRTDYTGETDYAERICGLARGKGFD 92 Query: 58 VLCEELR 64 + +LR Sbjct: 93 LSPADLR 99 >UniRef50_Q8W6G8 Putative uncharacterized protein orf59 n=1 Tax=Sinorhizobium phage PBC5 RepID=Q8W6G8_9CAUD Length = 80 Score = 44.6 bits (104), Expect = 9e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 15 VGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPD 66 G Q +A LG P +++QW +++P E IE T + +L P+ Sbjct: 12 RGAQKRLAAHLGKWPSTISQW----KRVPVEYLAEIEAFTG--IPRNQLLPE 57 >UniRef50_D2C499 Transcriptional regulator, XRE family n=7 Tax=Thermotogaceae RepID=D2C499_THENR Length = 127 Score = 44.6 bits (104), Expect = 9e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 Q +A+ LGVS V++ G + + I A G++ Sbjct: 49 TQKDLAKKLGVSQSMVSKIETGEKNISIRVLAKIVAALGGKIK 91 >UniRef50_D0TRF9 HigA family addiction module antidote protein n=6 Tax=Bacteroides RepID=D0TRF9_9BACE Length = 104 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 4 ENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 K+ G Q A ++GVS +N + G R + + IE AT Sbjct: 13 PGEIIKEELQSRGISQKRFAEVVGVSYTMLNDILNGRRPVSTDFALLIEAATN 65 >UniRef50_B1VF05 Putative transcriptional regulator (HTH_3 family) n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VF05_CORU7 Length = 115 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 6 YSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 + + A + G Q +A G+S +V++ +KG R + I AT V Sbjct: 12 SAIESALSSAGLSQRDLAARTGLSQSTVHRILKGERNVKMPELIRIADATGCTV 65 >UniRef50_C7RCB9 Transcriptional regulator, XRE family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCB9_KANKD Length = 242 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSA 76 Q AR LG+ +++ E + T EV +E+ D+D Y+R++ Sbjct: 17 TQPEFARKLGIEQSYLSKMENDKSIPSTEMFDKLC--TAYEVTPDEMLKDLDREYIRQN- 73 Query: 77 CCSQNMSVKQLNDSNKSS 94 + N +K + Sbjct: 74 LMHIPIIANNSNSKHKIA 91 >UniRef50_B9JNX2 Adenylate/guanylate cyclase protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9JNX2_AGRRK Length = 1342 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 20/37 (54%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERA 53 Q+ +A LG+ ++++W G + ++ PAI + Sbjct: 27 SQTELAAELGLKQQAISRWEAGTHRPSVDQVPAIAKL 63 >UniRef50_Q79RI9 HTH-type transcriptional regulator for conjugative element R391 n=22 Tax=Gammaproteobacteria RepID=TR96_PRORE Length = 215 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERA 53 MK + A + G QS +AR +G+ S++Q G + I A Sbjct: 1 MKTLSERLNHALQLTGVTQSELARRIGIKQQSISQICSGKSA-RSRYTMQIAEA 53 >UniRef50_Q1LA95 Transcriptional regulator, XRE family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LA95_RALME Length = 233 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 M ++N + K+A + QS +A+ LG+S + ++W G ++P + ++ A V Sbjct: 1 MVRKN-AMKRARRLARLTQSEIAKRLGLSQSTYHRWESGEIEVPEAKVISLSEALG--VS 57 Query: 60 CEELR 64 E LR Sbjct: 58 VEYLR 62 >UniRef50_B1M2M6 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2M6_METRJ Length = 84 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M+ +Y + + A ++G + +V +++ G R+ ++ IER T G V Sbjct: 5 MRLTDYLRQHELTH----TEFAAMIGATQAAVTRYVNGRRKPSLDKLILIERVTEGAVRA 60 Query: 61 EEL 63 + Sbjct: 61 LDF 63 >UniRef50_C5CH39 Transcriptional regulator, XRE family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH39_KOSOT Length = 153 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 11/74 (14%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGE-------- 57 ++ + Q +A++LG + ++++ R+ E I A G+ Sbjct: 41 EVIERRAELKISQKKLAKILGTTQSVISRFENMGRKPGYEFIKRISEALGGKLMITLNGD 100 Query: 58 ---VLCEELRPDID 68 V+ ELR +D Sbjct: 101 YAVVVPTELRERVD 114 >UniRef50_B7J7H3 Transcriptional regulator, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7H3_ACIF2 Length = 243 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 NYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGV---RQLPA-ERCPAIERATR 55 + K A G Q+A+A LG+S S++QW+ G R +P+ E + + Sbjct: 4 HERIKFAIKQSGFTQNALAEKLGISRGSISQWVSGNIATRTVPSRENLFRLAELSG 59 >UniRef50_Q728H0 Transcriptional regulator, putative n=4 Tax=Desulfovibrio vulgaris RepID=Q728H0_DESVH Length = 257 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 6/91 (6%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 +A A+VGG A+A + GVS +V W G R + + + Sbjct: 28 QQFIAEAIALVGGVRALASIAGVSERTVYAWKNGERFPSRTNLNRLSEHLE-HLSRQGYS 86 Query: 65 PDID---WSYLRRSACCSQNMSVKQLNDSNK 92 P W LR S Q +D+++ Sbjct: 87 PSAPQPHWRALRERMPGSYAPQ--QPDDTDR 115 >UniRef50_B9P4Q9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9P4Q9_POPTR Length = 77 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 2/66 (3%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSAC 77 +A G +P + Q + G R I A +L +LRP DW + Sbjct: 11 ARELAVRAGTTPAYLYQVLTGRRAANPALARRI-NAADPRILLSDLRPG-DWHEIWPELA 68 Query: 78 CSQNMS 83 + + Sbjct: 69 QATAQA 74 >UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0EID5_9CLOT Length = 261 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%) Query: 5 NYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 N + G Q +A LGVS +V++W G E A+ V +EL Sbjct: 4 NEKLQILRKEAGLSQERLAEKLGVSRQAVSKWESGQSTPDIENLSALSDLFG--VTLDEL 61 >UniRef50_C6SQ36 Plasmid maintenance system antidote protein n=1 Tax=Streptococcus mutans NN2025 RepID=C6SQ36_STRMN Length = 97 Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 QS A +GVS V+ + + L A+ +E+ T Sbjct: 23 QSDFAERIGVSQKHVSDLLNRKKFLNADLAVRVEQVTG 60 >UniRef50_B2HWL5 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2HWL5_ACIBC Length = 82 Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 1 MKKENYSFKQACAVVGGQS---AMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGE 57 +K + S +G S A A G + ++ Q G + I + GE Sbjct: 10 IKNQVSSLLAYMKKLGSDSEVQAFAEKCGTTKGNLLQIAYGGS-VSPILSKKISNQSGGE 68 Query: 58 VLCEELRPDI 67 VL +LRPDI Sbjct: 69 VLLSDLRPDI 78 >UniRef50_D2U1D7 Conserved hypothetical phage protein n=1 Tax=Arsenophonus nasoniae RepID=D2U1D7_9ENTR Length = 65 Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 12 CAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 GG A A++L +S +V+ W +P + IE+ T+ Sbjct: 2 IDYFGGTVATAKVLNISKSTVSLW---GEVIPWKYALLIEKLTK 42 >UniRef50_A8V1Y7 Putative uncharacterized protein (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V1Y7_9AQUI Length = 69 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 19 SAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL-RPD 66 +A + G+ P ++ G R + AIE+AT GE+ E L PD Sbjct: 1 KELANIAGIPQPVISYIETGERLPTEKHALAIEQATNGEIKKEWLVFPD 49 >UniRef50_C7QJ41 Transcriptional regulator, XRE family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QJ41_CATAD Length = 501 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDW 69 Q+A+AR GVS +V W G R +R + R V E D W Sbjct: 40 TQAAVARYFGVSAETVRSWFSGRRNPGPDRVRDLARFAG--VSPIEAFVDAGW 90 >UniRef50_C8Q8I4 Putative phage repressor n=1 Tax=Pantoea sp. At-9b RepID=C8Q8I4_9ENTR Length = 230 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 M K + ++ +AR+ GVSP +VN W K + + I AT Sbjct: 8 MSKATTRLDELLKAANLSKADLARIAGVSPQAVNNWFKRGE-IGKDSAIKISAATG 62 >UniRef50_B8IIS9 Putative plasmid maintenance system antidote protein, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IIS9_METNO Length = 81 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 7 SFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 + +Q G S +A +G + ++++ ++G R + + +ER T G V ++ Sbjct: 3 ALEQYFEETGDNVSKLAERMGRAATTISRPLRGERNVSLDIALDVERVTGGRVTADQF 60 >UniRef50_B4ESL6 Putative phage regulatory protein n=2 Tax=Enterobacteriaceae RepID=B4ESL6_PROMH Length = 61 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Query: 7 SFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 + + GG A+A+ L +S ++ QW + R PA I Sbjct: 3 ALETTIKKAGGIPALAKKLKISDQAIRQWEQKGRIPPARYA-QINELFG 50 >UniRef50_D2MG99 Helix-turn-helix domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MG99_RHOPA Length = 89 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 20 AMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +AR +G + ++++ G + L P I T + ELRPD+ Sbjct: 25 DLARRIGTTTANLSRIETGKQALSDALLPKIVAETG--IPARELRPDL 70 >UniRef50_Q03UG5 Transcriptional regulator, xre family n=2 Tax=Leuconostoc RepID=Q03UG5_LEUMM Length = 204 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M + Q+ +AR L VSP +++ W E I + V Sbjct: 1 MTFSKSLKELRLLHELSQTQLARKLNVSPKTISNWENERNLPDIELIIKISKVLD--VTL 58 Query: 61 EEL 63 +EL Sbjct: 59 DEL 61 >UniRef50_B7S386 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S386_9GAMM Length = 109 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 12/69 (17%) Query: 17 GQSAMARLLGVSPPS-VNQWIKGVRQLPAERCPAIERATRGEVLCE-----ELRPDIDWS 70 QS +AR LG + P VN+ +KG R + + +ERAT G+ E +LR W Sbjct: 13 SQSMLARQLGFNQPQPVNELVKGKRGITPKMALLLERATEGKYPAEFWLLAQLR----WE 68 Query: 71 Y--LRRSAC 77 R+S Sbjct: 69 LSQARQSTP 77 >UniRef50_Q48LS2 Repressor protein c2, putative n=8 Tax=Gammaproteobacteria RepID=Q48LS2_PSE14 Length = 308 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 3 KENYSFKQACAVVGGQS-AMARLLGVSPPSVNQWIKGVRQ-LPAERCPAIERATRGE 57 +A A G + +A GV+ +V QWI G + L E A+ RAT Sbjct: 92 TRQERIARAIAASGMKKGEIAAQCGVANSAVTQWISGESKSLRPENLYALARATGFR 148 >UniRef50_B0G1D1 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G1D1_9FIRM Length = 159 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 17/43 (39%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 Q +A LGV +++ W GV + + I + V Sbjct: 23 TQKELAEKLGVKHNAISSWENGVNSIDIDTLFQICKIFGISVN 65 >UniRef50_C9ZE23 Putative LysR-family transcriptional regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZE23_STRSW Length = 306 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 12/62 (19%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR-GEVL 59 M ++ A G SA+AR LG + +V+Q +ER T G V Sbjct: 1 MTLDDLRVFVAVCRAGSLSAVARDLGCTQSAVSQ-----------HVRRLERETGVGLVE 49 Query: 60 CE 61 + Sbjct: 50 RQ 51 >UniRef50_A8U7M3 Dynamin n=1 Tax=Carnobacterium sp. AT7 RepID=A8U7M3_9LACT Length = 745 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 1/59 (1%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 M ++ K +G Q +A LG+ ++ W +P I T ++ Sbjct: 1 MNNNSFDLKNFRTTIGWTQKKLADKLGIGQSTITSWESNSGNIPFNSMLEIANVTGYKL 59 >UniRef50_Q60C36 DNA-binding protein n=3 Tax=Bacteria RepID=Q60C36_METCA Length = 386 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%) Query: 2 KKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 + G Q+ +AR LG + V+Q I G + + +ER Sbjct: 14 SPPGDTIADVLEERGWTQAELARRLGYTEKHVSQLINGKAAITEDTASRLERVLG 68 >UniRef50_C0FVH9 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVH9_9FIRM Length = 178 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 1 MKKEN--YSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERA 53 M + ++ G Q MA+ LGV+ P+VN+W G E I R Sbjct: 1 MTQMQIGSVIRKYRKECGLTQEEMAKRLGVTTPAVNKWENGNTNPDIELLAPIARL 56 >UniRef50_Q7D1G4 Putative uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D1G4_AGRT5 Length = 99 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Query: 25 LGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 +GV+P +V QW + +P E +E+A V R D+ Sbjct: 53 IGVTPQAVAQW----KAIPPEHVLKLEKAFG--VSRHIQRADV 89 >UniRef50_A4W7L5 Regulator protein, putative n=1 Tax=Enterobacter sp. 638 RepID=A4W7L5_ENT38 Length = 75 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%) Query: 11 ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPA------IERATRGEVLCEELR 64 A VGGQ+A ARL G+S ++++W+K E + A+ G+ E LR Sbjct: 7 AIDAVGGQTAAARLCGLSNVAIHKWVKNEALPRTEYTEKTNYSQVLAEASAGKFTAEWLR 66 Query: 65 ----PD 66 PD Sbjct: 67 QVANPD 72 >UniRef50_B0V853 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii AYE RepID=B0V853_ACIBY Length = 86 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 21 MARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 A+ G + ++ Q G + A I + + G++ +LRPD+ Sbjct: 39 FAKSCGTTVNNLFQIAYGGS-VSATLSKTINKESEGKISLSDLRPDV 84 >UniRef50_Q8F1A5 Predicted transcriptional regulator n=2 Tax=Leptospira interrogans RepID=Q8F1A5_LEPIN Length = 134 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Query: 1 MKKENYSFKQ-ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIE 51 M ++ K G Q +G S +++ W+ G +P + IE Sbjct: 1 MSEQKKRLKTILLDFKGNQREFGVTIGKSKQTISGWLSGRFPIPEDAAITIE 52 >UniRef50_D2RAC0 DNA-binding protein n=2 Tax=Actinobacteria (class) RepID=D2RAC0_GARVA Length = 328 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 20/55 (36%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 M + + Q +A LGVS +V++W ER A+ R Sbjct: 1 MILADKILELRKQNGWSQEELADKLGVSRQAVSKWEGAQSIPDMERIIALSRLFG 55 >UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Escherichia coli RepID=C8TM97_ECO26 Length = 133 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 6 YSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 Y + G Q+ +AR +GV+ +V QW+ G A + + Sbjct: 10 YRISKLLQETGWSQAELARRIGVTQQTVQQWVSGKATPKASSLDKLVEVSG 60 >UniRef50_A6STU3 Prophage Pfl 6 Cro repressor n=2 Tax=Pseudomonas RepID=A6STU3_PSEF5 Length = 67 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 3 KENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEE 62 + + G QSA+A LGV+ +++Q + A R I G V E Sbjct: 1 MKKIPLSKYLEEHGTQSALAAALGVNQSAISQM------VRAGRSIEITLYEDGRVEANE 54 Query: 63 LRP 65 +RP Sbjct: 55 IRP 57 >UniRef50_Q141U8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q141U8_BURXL Length = 88 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 1/61 (1%) Query: 21 MARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQ 80 A + + + I ++L + C IER V +LRP DW + Sbjct: 19 FASTCRTTIGYLRKAISAGQELRPDLCVRIERYPGCPVGRIDLRPR-DWFENWPELVAAS 77 Query: 81 N 81 Sbjct: 78 P 78 >UniRef50_Q2G3X4 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3X4_NOVAD Length = 88 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 G+ +A +G + ++N++ G R A I+ AT G+V Sbjct: 30 GERELAAAIGRTQVTINRYRNGNRFPDARTARLIDDATGGKVP 72 >UniRef50_Q2P3H3 18.2K protein n=1 Tax=Xanthomonas oryzae pv. oryzae MAFF 311018 RepID=Q2P3H3_XANOM Length = 223 Score = 41.5 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 1 MKKENYSFK--QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERA 53 M EN +A +A+A+ LGV+ V+ W G +P ++ + Sbjct: 15 MSAENELIDLVRAGGKFSSDNALAQKLGVTRAMVSSWRSGRYAMPDDQIAQLCAL 69 >UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQI9_9BACI Length = 210 Score = 41.5 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 14/80 (17%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSA 76 Q+ +A +GVS +V++W G + +V ++L A Sbjct: 17 SQAFVAEEMGVSRQAVSKWETGQSVPSTAHLIRLAEVLGCDV--QDL------------A 62 Query: 77 CCSQNMSVKQLNDSNKSSFD 96 Q Q + + S D Sbjct: 63 EPDQEAQPAQPAEESGSKKD 82 >UniRef50_B7ML20 Putative uncharacterized protein n=13 Tax=Escherichia RepID=B7ML20_ECO45 Length = 96 Score = 41.5 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 8/61 (13%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 MKK + GG A LG S +V+ W ++P + I+ T G + Sbjct: 17 MKKS-----EVLGYFGGVVKTAAALGTSKTTVSMW---GEEVPWKWALLIQAVTAGALKY 68 Query: 61 E 61 E Sbjct: 69 E 69 >UniRef50_C6LAS4 Transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAS4_9FIRM Length = 336 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 12/59 (20%) Query: 14 VVGGQ--SAMARLLGVSPPSVNQWIKGVRQLPA---ERCPAIERATRGEVLCEELRPDI 67 +VGG +A++ GVS +VN+ + G ++ ER + R + RPD+ Sbjct: 5 IVGGITTKDLAQMCGVSRTTVNRALSGTGRISPDTKERILRVARE-------HDYRPDL 56 >UniRef50_C7CEU7 Putative plasmid maintenance system antidote protein, HTH DNA-binding domain n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CEU7_METED Length = 364 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 1/55 (1%) Query: 2 KKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 + G Q+ ARL G++P V+ I G + E +E Sbjct: 13 THPGEHLAEYIEERGWSQAEFARLAGLTPKLVSTIINGTNPVTPETALRLEHVLG 67 >UniRef50_Q5WH75 Transcriptional regulator n=2 Tax=Bacillus RepID=Q5WH75_BACSK Length = 74 Score = 41.1 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRS 75 +A+ +G+S ++Q G RQ+ AE I + V EEL + +R+ Sbjct: 16 SLEEVAKEVGISAGYLSQIESGKRQVSAEIAKLIAKL--FSVDREELFEATRFKAIRQE 72 >UniRef50_D1SQQ5 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SQQ5_9BURK Length = 316 Score = 41.1 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 14/68 (20%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQ--------------WIKGVRQLPAER 46 M + ++ +A G +A AR GVS P+V+ +G R++P E Sbjct: 4 MYLPHLAYLRALIEHGSFAAAARACGVSQPAVSHGMRMLQARFDAPLLVREGRRRVPTEL 63 Query: 47 CPAIERAT 54 + + Sbjct: 64 ALRVAAES 71 >UniRef50_B4DA78 Putative phage repressor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA78_9BACT Length = 311 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEEL 63 +A+L+G P V + G ++ IE E+ EEL Sbjct: 110 SAGQLAKLIGYKAPIVENVVHGTGRISESMAEKIEEVLDHEITKEEL 156 >UniRef50_C1YIC5 Helix-turn-helix protein n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YIC5_NOCDA Length = 274 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 18 QSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR--GEVL 59 Q+ +AR L V+ +++ W G R+LP E+ ++ G + Sbjct: 27 QTQVARALKVTQSTMSSWECGKRKLPVEQAERLDELFGSSGAIK 70 >UniRef50_C9L320 Toxin-antitoxin system, antitoxin component, Xre family n=9 Tax=Bacteroidales RepID=C9L320_9BACE Length = 114 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 18/63 (28%), Gaps = 3/63 (4%) Query: 2 KKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 K G Q +A +G S VN I R + + E A + Sbjct: 22 THPGELIKDEIEFRGISQKKLADRMGASYTVVNDIINCKRAVNPQYALLFEAALG--IPA 79 Query: 61 EEL 63 L Sbjct: 80 HIL 82 >UniRef50_Q4K5P6 Proteic killer suppressor protein n=9 Tax=Proteobacteria RepID=Q4K5P6_PSEF5 Length = 96 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 22/41 (53%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGE 57 + +AR +G + P +++ + G + AE +ERA G+ Sbjct: 24 SVTELARHIGYARPHLSKVLNGHAPIRAELAVKLERAGIGK 64 >UniRef50_C9Z9U9 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z9U9_STRSW Length = 381 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 3 KENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 + K+ +G Q+ +AR G+S +NQ ++G L E +ERAT Sbjct: 18 PPGETLKEQLEALGIPQADLARRTGLSTKHINQIVQGTAVLTPETALLLERATG 71 >UniRef50_Q136G0 Transcriptional regulators n=3 Tax=Rhodopseudomonas palustris RepID=Q136G0_RHOPS Length = 119 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 13/98 (13%) Query: 1 MKKENYSFKQACAVVG--GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 M +A + G Q A+A +GV+ ++ +W R + + + R V Sbjct: 1 MSNRGERMVEAMQLRGMTKQHALAFAMGVNESTITRWKN-NRPMSIDHAVLLCRTLD--V 57 Query: 59 LCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFD 96 +DW L +Q +SSF Sbjct: 58 S-------LDW-LLTGVGQIDAAKPCRQPTPEGESSFL 87 >UniRef50_A8ZP63 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZP63_ACAM1 Length = 86 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVR--QLPAERCPAIERATRGEVLCEELRPDIDWS 70 Q+ +A LGV P S+ W G L + + V EEL + W Sbjct: 29 SQTQLANELGVKPQSIGNWENGRSIPTLNPCQVKKLCEMLN--VTLEELCNAVHWE 82 >UniRef50_B4VL76 Helix-turn-helix domain protein n=8 Tax=Cyanobacteria RepID=B4VL76_9CYAN Length = 81 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 1 MKKENYSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERA 53 M K + +Q G Q+ +A LGV + +W R AE I +A Sbjct: 1 MGKAGQALRQTLDTYGISQNKLAVTLGVDRSMIFKWYHEKRDPTAETVVQIAQA 54 >UniRef50_Q5FN49 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FN49_GLUOX Length = 72 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELR 64 A + GGQ A+AR L +S ++Q + R R G V+ E +R Sbjct: 10 QSIVSDAVELAGGQHALARELRISQSDISQAVNNGRTDSRNRVLNA----LGYVVVETIR 65 Query: 65 P 65 P Sbjct: 66 P 66 >UniRef50_Q1CP28 Transcriptional regulator, Cro/CI family n=8 Tax=Bacilli RepID=Q1CP28_STRPF Length = 70 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 18/35 (51%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIE 51 Q +A+ LGV+ S++ W K ++ E ++ Sbjct: 15 SQRELAKELGVTQTSISNWEKDQTKISGEYLISLA 49 >UniRef50_C7N3C8 Helix-turn-helix protein n=2 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3C8_SLAHD Length = 71 Score = 40.4 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 QS +AR +G +P S+++ +G R I A E EL D+ Sbjct: 14 SQSELARRIGANPVSISRIERGKEPPYPLRSQRIADALGWEGDPAELFEDV 64 >UniRef50_D0FW95 Putative prophage regulatory ptotein n=2 Tax=Erwinia pyrifoliae RepID=D0FW95_ERWPY Length = 133 Score = 40.4 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSA 76 QS +A L VS +V W G R++ P + + V EEL LR+ Sbjct: 40 TQSELADKLNVSQQTVQAWEAGRRRIKVSSLPFVAQI--FSVPLEELFGGSPEKVLRKRG 97 Query: 77 CCSQNMSVKQLNDS 90 ++ + + D Sbjct: 98 PTAKWQQLIEEVDD 111 >UniRef50_A5CEV6 Putative transcriptional regulator n=2 Tax=Orientia tsutsugamushi RepID=A5CEV6_ORITB Length = 79 Score = 40.4 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 1 MKKENYSFKQACAVVG------------GQSAMARLLGVSPPSVNQWIKGVRQLPAERCP 48 M K + +A +G ++ +A +GV+ ++++ KG+ ++ R Sbjct: 1 MAKHHEYIDRANRFIGNRIYMVRLEQKLSRNNLAASIGVTHQQLHKYEKGINRISIGRLM 60 Query: 49 AIERATRGEV 58 I +A V Sbjct: 61 LIAKALNKNV 70 >UniRef50_D1Q0N7 Helix-turn-helix domain protein n=4 Tax=Prevotella RepID=D1Q0N7_9BACT Length = 114 Score = 40.4 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERA 53 Q+ +A+ +G S V++ ++G L E IE A Sbjct: 65 TQTELAQRMGCSQQYVSKILRGKENLSIETLCKIEDA 101 >UniRef50_D1DBX2 Transcriptional regulator n=3 Tax=Neisseria gonorrhoeae RepID=D1DBX2_NEIGO Length = 223 Score = 40.4 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 11 ACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 A G Q+ +R + +P +NQW+ G R + IE A Sbjct: 3 ADRFNGNQAEFSRAINKAPAQINQWLNGYRNIGDGVAAQIEIALG 47 >UniRef50_B2HL42 Plasmid maintenance system antidote protein n=1 Tax=Mycobacterium marinum M RepID=B2HL42_MYCMM Length = 364 Score = 40.4 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 22/39 (56%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 Q +A+ LGVSP +NQ +KGV + AE +E+ Sbjct: 33 TQMELAQRLGVSPKHINQVVKGVASISAELALGLEKVFG 71 >UniRef50_A4JWA5 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JWA5_BURVG Length = 60 Score = 40.4 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 17/27 (62%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLP 43 Q+ AR LGV P +V++W+ G + P Sbjct: 16 SQAEFARRLGVDPTTVSRWVSGRSKFP 42 >UniRef50_P06965 Repressor protein of division inhibition gene dicB n=45 Tax=Enterobacteriaceae RepID=DICC_ECOLI Length = 76 Score = 40.4 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 10 QACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 A G ++ +A+ G+ S+ W +P R ++ A+ GE+ Sbjct: 5 DALLYFGSKTKLAQAAGIRLASLYSW--KGDLVPEGRAMRLQEASGGEL 51 >UniRef50_A8T0N7 Putative uncharacterized protein n=1 Tax=Vibrio sp. AND4 RepID=A8T0N7_9VIBR Length = 64 Score = 40.4 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%) Query: 19 SAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 + MA L S + I G + A + T GEV +LRPDI Sbjct: 15 AEMAVKLKTSTEYLRLVITGHKVPGAALAKNLHDLTHGEVDKHKLRPDI 63 >UniRef50_Q03N54 Transcriptional regulator, xre family n=15 Tax=Lactobacillus RepID=Q03N54_LACBA Length = 111 Score = 40.4 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 17/39 (43%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 Q+ +A LGVS +++ +K R + IE Sbjct: 30 TQTDLAARLGVSQKNISDILKRKRFINELLALRIETVMG 68 >UniRef50_C7MVX6 Helix-turn-helix protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MVX6_SACVD Length = 281 Score = 40.0 bits (92), Expect = 0.023, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 8 FKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVR-QLPAERCPAIERATRGEVLCEEL 63 ++A G A +L S ++++W G R P + + +A V ++L Sbjct: 15 LRKAREAAGYSVRQFAAMLDTSHATISRWETGQRTPTPEDVAAYLAKAGVSAVTRQQL 72 >UniRef50_A8ZLR5 Plasmid maintenance system antidote system, putative n=2 Tax=Bacteria RepID=A8ZLR5_ACAM1 Length = 104 Score = 40.0 bits (92), Expect = 0.025, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 18/39 (46%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 +A+ LGVS ++++ + G + + +E+ Sbjct: 24 SARQLAKALGVSHSAISRLVSGQAAVTPDMAIRLEKGVG 62 >UniRef50_A7MHM9 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A7MHM9_ENTS8 Length = 99 Score = 40.0 bits (92), Expect = 0.025, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 6 YSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 Y+ ++A +V Q+ MAR +G++ PSV + ++ A G V + P Sbjct: 33 YALREALSV--SQTEMARQMGIAQPSVAAIEQRGNEMKISTLKRYVEALGGTVRLDVELP 90 Query: 66 D 66 D Sbjct: 91 D 91 >UniRef50_C8T869 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T869_KLEPR Length = 77 Score = 40.0 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Query: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLC 60 M +NY Q A+L+G + V++ G L A AT +V Sbjct: 1 MDLKNYLKTSGVR----QQDFAQLVGETQGYVSRVASGKCMLGAATALKWAAATGYQVTP 56 Query: 61 EELRPDI 67 +L P+I Sbjct: 57 HDLLPNI 63 >UniRef50_Q5FNI8 Putative phage protein n=1 Tax=Gluconobacter oxydans RepID=Q5FNI8_GLUOX Length = 76 Score = 40.0 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 6/59 (10%) Query: 9 KQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDI 67 K + GG + + + +V W R++P I + V +RPD+ Sbjct: 13 KDIIRMAGGPLKVGQAVHRHHSTVCGW----RKIPPCHAITIAQMAG--VSVHVIRPDV 65 >UniRef50_B4RFH0 Transcriptional regulator, XRE family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFH0_PHEZH Length = 136 Score = 39.6 bits (91), Expect = 0.028, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVL 59 Q A+A GVS + ++ G ++ R I RA R V Sbjct: 30 SQEALAEQCGVSFQQIQKYENGANRISFSRLVQIARALRCRVT 72 >UniRef50_B9BHR2 Conserved domain protein n=2 Tax=Burkholderia multivorans RepID=B9BHR2_9BURK Length = 68 Score = 39.6 bits (91), Expect = 0.031, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 21/31 (67%) Query: 5 NYSFKQACAVVGGQSAMARLLGVSPPSVNQW 35 N + +QA + G +A+AR LG++ +V+QW Sbjct: 2 NLTKQQATDIFGSGAALARALGITKGAVSQW 32 >UniRef50_UPI0001B4BA50 hypothetical protein ShygA5_38643 n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4BA50 Length = 102 Score = 39.6 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 4/77 (5%) Query: 7 SFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRP 65 K+A G Q A+AR LGVS + Q G + A A GE+ LR Sbjct: 27 FLKRARRSRGMSQRALARELGVSQARIAQIENGASTPQIDTMAAYITALGGELT---LRA 83 Query: 66 DIDWSYLRRSACCSQNM 82 D + + Sbjct: 84 DFHDHVTQTTWPEQHPT 100 >UniRef50_C5B1U8 Putative uncharacterized protein n=5 Tax=Alphaproteobacteria RepID=C5B1U8_METEA Length = 225 Score = 39.2 bits (90), Expect = 0.036, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Query: 8 FKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPA 49 A G Q A A GVS ++ + G R P ER A Sbjct: 168 LSAAIREAGSQKAFAHKAGVSAGFLSDVVHGRRD-PGERVLA 208 >UniRef50_C9LCK9 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Clostridiales RepID=C9LCK9_RUMHA Length = 65 Score = 39.2 bits (90), Expect = 0.037, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 1/51 (1%) Query: 6 YSFKQACAVVG-GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 + ++A G QS +A L V +++W G E I R Sbjct: 5 ENIRKARKAAGVSQSELAERLQVHQKDISRWENGAHAPTIEMFAKICRELN 55 >UniRef50_D0KXR0 Plasmid maintenance system antidote protein, XRE family n=4 Tax=Gammaproteobacteria RepID=D0KXR0_HALNC Length = 96 Score = 39.2 bits (90), Expect = 0.039, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSA 76 A+A LGV+P +V + I G + E + +A R W ++ + Sbjct: 24 SVRALAESLGVAPSTVTRIINGHSAISPEMALRLAKALG--------RSAESWLAMQHNY 75 Query: 77 CCSQNMSVKQL 87 Q + L Sbjct: 76 DLWQAKQITDL 86 >UniRef50_C6P0T2 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0T2_9PROT Length = 100 Score = 39.2 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 17/39 (43%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 Q A LGVS +V++ + G R + + + + Sbjct: 29 TQGEFADRLGVSRRTVSEILHGRRPVTPDMAIRLGKLLG 67 >UniRef50_B3EPS4 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3EPS4_CHLPB Length = 157 Score = 38.8 bits (89), Expect = 0.049, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGE---VLCEELR 64 Q +A ++GV+P +++ +KG L E +E A V C E R Sbjct: 60 SQKDLAEMMGVTPQHISKIVKGRENLTLETIAKLEAALGIALMDVPCYEER 110 >UniRef50_A6NW39 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW39_9BACE Length = 210 Score = 38.8 bits (89), Expect = 0.050, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 15/37 (40%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERA 53 Q + LGVS +V++W G + E + Sbjct: 17 SQEQLGEALGVSRQAVSKWESGQTKPDLEAVGKMCEL 53 >UniRef50_C5CJM0 Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus S110 RepID=C5CJM0_VARPS Length = 121 Score = 38.8 bits (89), Expect = 0.058, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAE 45 Q +A +GVS +V W G + AE Sbjct: 16 SQGDVASEIGVSQQTVANWETGRSPMDAE 44 >UniRef50_D2MJ41 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJ41_9BACT Length = 87 Score = 38.8 bits (89), Expect = 0.059, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%) Query: 17 GQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 Q+ +A+ G S +N+ + G R + A+E A Sbjct: 26 NQTRLAKRCGCSTGKINEIVNGRRGISPAFAIALESALG 64 >UniRef50_Q9PG03 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa RepID=Q9PG03_XYLFA Length = 176 Score = 38.0 bits (87), Expect = 0.085, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 18/35 (51%) Query: 4 ENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKG 38 + +A +G +A+A+ L S VNQWI G Sbjct: 34 RRENLAKAAEELGSITALAKRLDRSDSQVNQWIHG 68 >UniRef50_A1KC49 Putative uncharacterized protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KC49_AZOSB Length = 114 Score = 38.0 bits (87), Expect = 0.091, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 12 CAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATR 55 Q A+AR LG+S VN+ ++G R + + + R Sbjct: 48 IPAAISQDALARALGISRRRVNELVRGRRAISPDTAVRLGRFFG 91 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.305 0.141 0.406 Lambda K H 0.267 0.0438 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 547,810,726 Number of Sequences: 3077464 Number of extensions: 18689336 Number of successful extensions: 74576 Number of sequences better than 1.0e-01: 214 Number of HSP's better than 0.1 without gapping: 245 Number of HSP's successfully gapped in prelim test: 117 Number of HSP's that attempted gapping in prelim test: 74216 Number of HSP's gapped (non-prelim): 363 length of query: 98 length of database: 1,040,396,356 effective HSP length: 67 effective length of query: 31 effective length of database: 834,206,268 effective search space: 25860394308 effective search space used: 25860394308 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 87 (38.0 bits)